BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy906
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5TNH5|GNPI_ANOGA Glucosamine-6-phosphate isomerase OS=Anopheles gambiae GN=Gnpda1
PE=3 SV=3
Length = 273
Score = 116 bits (291), Expect = 4e-26, Method: Composition-based stats.
Identities = 55/77 (71%), Positives = 63/77 (81%)
Query: 8 KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
K+P+ ++ ++ +VMI+I GSHKAFALYKAIEEGVNHMWTVSAFQ HP TIMIC
Sbjct: 180 KVPKQALTVGVATVMDAREVMIMILGSHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMIC 239
Query: 68 DEDATQELRVKTVKYFK 84
DEDAT ELRVKTVKYFK
Sbjct: 240 DEDATLELRVKTVKYFK 256
>sp|Q8TDQ7|GNPI2_HUMAN Glucosamine-6-phosphate isomerase 2 OS=Homo sapiens GN=GNPDA2 PE=1
SV=1
Length = 276
Score = 115 bits (289), Expect = 5e-26, Method: Composition-based stats.
Identities = 55/79 (69%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256
>sp|Q17QL1|GNPI2_BOVIN Glucosamine-6-phosphate isomerase 2 OS=Bos taurus GN=GNPDA2 PE=2
SV=1
Length = 276
Score = 115 bits (289), Expect = 6e-26, Method: Composition-based stats.
Identities = 55/79 (69%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256
>sp|Q16HW7|GNPI_AEDAE Glucosamine-6-phosphate isomerase OS=Aedes aegypti GN=Gnpda1 PE=3
SV=1
Length = 278
Score = 115 bits (289), Expect = 6e-26, Method: Composition-based stats.
Identities = 55/77 (71%), Positives = 62/77 (80%)
Query: 8 KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
K+P+ ++ + +VMILI G+HKAFALYKAIEEGVNHMWTVSAFQ HP TIMIC
Sbjct: 180 KVPKQALTVGVGTVMDAREVMILIIGAHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMIC 239
Query: 68 DEDATQELRVKTVKYFK 84
DEDAT ELRVKTVKYFK
Sbjct: 240 DEDATLELRVKTVKYFK 256
>sp|Q6PA43|GNPI2_XENLA Glucosamine-6-phosphate isomerase 2 OS=Xenopus laevis GN=gnpda2
PE=2 SV=1
Length = 275
Score = 115 bits (288), Expect = 9e-26, Method: Composition-based stats.
Identities = 55/79 (69%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI
Sbjct: 178 LSKVPTMALTVGVGTVMDAKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256
>sp|Q9VMP9|GNPI_DROME Glucosamine-6-phosphate isomerase OS=Drosophila melanogaster
GN=Gnpda1 PE=2 SV=1
Length = 273
Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
+ K+P+ ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ H T+M
Sbjct: 178 MSKVPKQALTVGVGTVMDSKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLM 237
Query: 66 ICDEDATQELRVKTVKYFK 84
ICDEDAT ELRVKTVKYFK
Sbjct: 238 ICDEDATLELRVKTVKYFK 256
>sp|Q9CRC9|GNPI2_MOUSE Glucosamine-6-phosphate isomerase 2 OS=Mus musculus GN=Gnpda2 PE=2
SV=1
Length = 276
Score = 114 bits (285), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKA+EEGVNHMWTVSAFQ HP TI
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAMEEGVNHMWTVSAFQQHPRTIF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256
>sp|Q29NT9|GNPI_DROPS Glucosamine-6-phosphate isomerase OS=Drosophila pseudoobscura
pseudoobscura GN=Gnpda1 PE=3 SV=1
Length = 274
Score = 114 bits (284), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
+ K+P+ ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ H T+M
Sbjct: 178 MSKVPKQALTVGVGTVMDSKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLM 237
Query: 66 ICDEDATQELRVKTVKYFK 84
ICDEDAT ELRVKTVKYFK
Sbjct: 238 ICDEDATLELRVKTVKYFK 256
>sp|A4IHW6|GNPI2_XENTR Glucosamine-6-phosphate isomerase 2 OS=Xenopus tropicalis GN=gnpda2
PE=2 SV=1
Length = 275
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256
>sp|O88958|GNPI1_MOUSE Glucosamine-6-phosphate isomerase 1 OS=Mus musculus GN=Gnpda1 PE=2
SV=3
Length = 289
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+
Sbjct: 178 LAKVPTMALTVGVGTVMDAKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256
>sp|Q64422|GNPI1_MESAU Glucosamine-6-phosphate isomerase 1 OS=Mesocricetus auratus
GN=GNPDA1 PE=2 SV=1
Length = 289
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+
Sbjct: 178 LAKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256
>sp|A4FV08|GNPI1_BOVIN Glucosamine-6-phosphate isomerase 1 OS=Bos taurus GN=GNPDA1 PE=2
SV=1
Length = 289
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+
Sbjct: 178 LAKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256
>sp|P46926|GNPI1_HUMAN Glucosamine-6-phosphate isomerase 1 OS=Homo sapiens GN=GNPDA1 PE=1
SV=1
Length = 289
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+
Sbjct: 178 LTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256
>sp|Q5R8T8|GNPI1_PONAB Glucosamine-6-phosphate isomerase 1 OS=Pongo abelii GN=GNPDA1 PE=2
SV=1
Length = 289
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
L K+P ++ + +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+
Sbjct: 178 LTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVF 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256
>sp|Q54XK9|GNPI_DICDI Glucosamine-6-phosphate isomerase OS=Dictyostelium discoideum
GN=gnpda1 PE=3 SV=1
Length = 267
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 49/59 (83%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
++++++TG KA ALY+ IEEGVNHMWT SA QMH +I++CDEDAT EL+VKT KYFK
Sbjct: 201 EIILIVTGHSKAIALYRTIEEGVNHMWTASAIQMHKKSIIVCDEDATAELKVKTYKYFK 259
>sp|Q9XVJ2|GNPI_CAEEL Probable glucosamine-6-phosphate isomerase OS=Caenorhabditis
elegans GN=T03F6.3 PE=1 SV=1
Length = 267
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
+ K+P ++ + +VMILITGSHKA AL++AIE G++HM TVSA QMH C
Sbjct: 177 ITKVPTQALTVGVQTVMDAREVMILITGSHKALALHQAIECGISHMCTVSAMQMHRCATF 236
Query: 66 ICDEDATQELRVKTVKYFK 84
I DEDAT EL+VKTVKYFK
Sbjct: 237 IADEDATLELKVKTVKYFK 255
>sp|B6EN78|NAGB_ALISL Glucosamine-6-phosphate deaminase OS=Aliivibrio salmonicida (strain
LFI1238) GN=nagB PE=3 SV=1
Length = 266
Score = 89.4 bits (220), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 58/79 (73%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
+ ++P+ ++ + +++MILITG +KA AL A+E VNHMWTVSA Q+HP +++
Sbjct: 178 IAQVPKYALTIGVGTLLDSAEIMILITGHNKALALQAAVEGSVNHMWTVSALQIHPKSVI 237
Query: 66 ICDEDATQELRVKTVKYFK 84
+CDE + QEL+VKTVKYFK
Sbjct: 238 VCDEASQQELKVKTVKYFK 256
>sp|B7VTI0|NAGB_VIBSL Glucosamine-6-phosphate deaminase OS=Vibrio splendidus (strain
LGP32) GN=nagB PE=3 SV=1
Length = 266
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 49/58 (84%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
++M+L+TG +KA AL A+E VNH+WTVSA Q+HP ++++CDE ATQEL+VKTVKYF
Sbjct: 198 EIMVLVTGHNKALALEAAVEGSVNHLWTVSALQLHPKSVIVCDEPATQELKVKTVKYF 255
>sp|B5FBU7|NAGB_VIBFM Glucosamine-6-phosphate deaminase OS=Vibrio fischeri (strain MJ11)
GN=nagB PE=3 SV=1
Length = 266
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 49/59 (83%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
++MILITG +K AL A+E VNH+WTVSA Q+HP ++++CDE +TQEL+VKTVKYF+
Sbjct: 198 EIMILITGHNKGLALQAAVEGSVNHLWTVSALQLHPKSVIVCDEPSTQELKVKTVKYFQ 256
>sp|Q5E294|NAGB_VIBF1 Glucosamine-6-phosphate deaminase OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=nagB PE=3 SV=1
Length = 266
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 49/59 (83%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
++MILITG +K AL A+E VNH+WTVSA Q+HP ++++CDE +TQEL+VKTVKYF+
Sbjct: 198 EIMILITGHNKGLALQAAVEGSVNHLWTVSALQLHPKSVIVCDEPSTQELKVKTVKYFQ 256
>sp|Q7MGE1|NAGB_VIBVY Glucosamine-6-phosphate deaminase OS=Vibrio vulnificus (strain
YJ016) GN=nagB PE=3 SV=1
Length = 266
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 49/58 (84%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
++MIL+TG +KA AL A+E VNH+WTVSA Q+HP ++++CDE +TQEL+VKTVKYF
Sbjct: 198 EIMILVTGHNKALALEAAVEGSVNHLWTVSALQLHPKSVIVCDEPSTQELKVKTVKYF 255
>sp|Q8D4T9|NAGB_VIBVU Glucosamine-6-phosphate deaminase OS=Vibrio vulnificus (strain
CMCP6) GN=nagB PE=3 SV=1
Length = 266
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 49/58 (84%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
++MIL+TG +KA AL A+E VNH+WTVSA Q+HP ++++CDE +TQEL+VKTVKYF
Sbjct: 198 EIMILVTGHNKALALEAAVEGSVNHLWTVSALQLHPKSVIVCDEPSTQELKVKTVKYF 255
>sp|C3LWT7|NAGB_VIBCM Glucosamine-6-phosphate deaminase OS=Vibrio cholerae serotype O1
(strain M66-2) GN=nagB PE=3 SV=1
Length = 266
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 48/58 (82%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
++MIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE +TQEL+VKTVKYF
Sbjct: 198 EIMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQELKVKTVKYF 255
>sp|Q9KKS5|NAGB_VIBCH Glucosamine-6-phosphate deaminase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=nagB PE=3
SV=1
Length = 266
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 48/58 (82%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
++MIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE +TQEL+VKTVKYF
Sbjct: 198 EIMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQELKVKTVKYF 255
>sp|A5F125|NAGB_VIBC3 Glucosamine-6-phosphate deaminase OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=nagB PE=3 SV=1
Length = 266
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 48/58 (82%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
++MIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE +TQEL+VKTVKYF
Sbjct: 198 EIMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQELKVKTVKYF 255
>sp|A7N5W3|NAGB_VIBHB Glucosamine-6-phosphate deaminase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=nagB PE=3 SV=1
Length = 266
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE + QEL+VKTVKYF
Sbjct: 198 EVMILVTGHNKALALEAAVEGSVNHLWTVSALQLHPKAVIVCDEPSQQELKVKTVKYF 255
>sp|B3GZ06|NAGB_ACTP7 Glucosamine-6-phosphate deaminase OS=Actinobacillus
pleuropneumoniae serotype 7 (strain AP76) GN=nagB PE=3
SV=1
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
+ K+P+ ++ ++ +VM+LITG +KA AL +E VNHMWTVSA Q+H I+
Sbjct: 178 ITKVPKYALTVGVATLLDAEEVMLLITGYNKALALQACVEGSVNHMWTVSALQLHKRGIV 237
Query: 66 ICDEDATQELRVKTVKYF 83
+CDE ATQEL+VKTVKYF
Sbjct: 238 VCDEPATQELKVKTVKYF 255
>sp|A3N353|NAGB_ACTP2 Glucosamine-6-phosphate deaminase OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=nagB PE=3
SV=1
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
+ K+P+ ++ ++ +VM+LITG +KA AL +E VNHMWTVSA Q+H I+
Sbjct: 178 ITKVPKYALTVGVATLLDAEEVMLLITGYNKALALQACVEGSVNHMWTVSALQLHKRGIV 237
Query: 66 ICDEDATQELRVKTVKYF 83
+CDE ATQEL+VKTVKYF
Sbjct: 238 VCDEPATQELKVKTVKYF 255
>sp|B0BSS6|NAGB_ACTPJ Glucosamine-6-phosphate deaminase OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=nagB PE=3
SV=1
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
+ K+P+ ++ ++ +VM+LITG +KA AL +E VNHMWTVSA Q+H I+
Sbjct: 178 ITKVPKYALTVGVATLLDAEEVMLLITGYNKALALQACVEGSVNHMWTVSALQLHKRGIV 237
Query: 66 ICDEDATQELRVKTVKYF 83
+CDE ATQEL+VKTVKYF
Sbjct: 238 VCDEPATQELKVKTVKYF 255
>sp|Q87K60|NAGB_VIBPA Glucosamine-6-phosphate deaminase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=nagB PE=3 SV=1
Length = 266
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE + QEL+VKTVKYF
Sbjct: 198 EVMILVTGHNKALALEAAVEGCVNHLWTVSALQLHPKAVIVCDEPSQQELKVKTVKYF 255
>sp|C6DBY4|NAGB_PECCP Glucosamine-6-phosphate deaminase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=nagB PE=3 SV=1
Length = 266
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
+VMIL+TG +KA AL A+E VNHMWT+S Q+H IM+CDE +T EL+VKTVKYF+
Sbjct: 198 EVMILVTGRNKALALQAAVEGNVNHMWTISCLQLHAKAIMVCDEPSTMELKVKTVKYFR 256
>sp|Q9CMF4|NAGB_PASMU Glucosamine-6-phosphate deaminase OS=Pasteurella multocida (strain
Pm70) GN=nagB PE=3 SV=1
Length = 267
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 8 KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
K+P+ ++ + +VMIL+TG +KA AL A+E +NH+WTV+A QMH I++C
Sbjct: 180 KVPKYALTIGVGTLLDAEEVMILVTGYNKAQALQAAVEGSINHLWTVTALQMHRRAIIVC 239
Query: 68 DEDATQELRVKTVKYF 83
DE ATQEL+VKTVKYF
Sbjct: 240 DEPATQELKVKTVKYF 255
>sp|C5BGA6|NAGB_EDWI9 Glucosamine-6-phosphate deaminase OS=Edwardsiella ictaluri (strain
93-146) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 47/59 (79%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
+VMIL+TG K+ AL A+E VNHMWT+SA Q+HP ++++CD+ AT EL+VKTV YF+
Sbjct: 198 EVMILVTGHAKSLALQAAVEGSVNHMWTISALQLHPKSVVVCDQPATMELKVKTVNYFR 256
>sp|C6C0A2|NAGB_DESAD Glucosamine-6-phosphate deaminase OS=Desulfovibrio salexigens
(strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)
GN=nagB PE=3 SV=1
Length = 265
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 48/59 (81%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
+V+IL +G +KA A+ A+E GVNH+WTVSA Q+H I++CDEDAT EL+VKT+KYFK
Sbjct: 196 EVIILASGLNKALAVSYAVEHGVNHLWTVSALQLHRKGILVCDEDATMELKVKTLKYFK 254
>sp|Q65QE8|NAGB_MANSM Glucosamine-6-phosphate deaminase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=nagB PE=3 SV=1
Length = 267
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 54/76 (71%)
Query: 8 KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
++P+ ++ ++ +VM+LITG KA AL +E VNH+WTVSA Q+H +I++C
Sbjct: 180 QVPKYALTIGVATLLDAEEVMLLITGHQKALALQACVEGAVNHLWTVSALQLHRHSIVVC 239
Query: 68 DEDATQELRVKTVKYF 83
DE ATQEL+VKTVKYF
Sbjct: 240 DEPATQELKVKTVKYF 255
>sp|Q3Z4C2|NAGB_SHISS Glucosamine-6-phosphate deaminase OS=Shigella sonnei (strain Ss046)
GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|Q32IQ2|NAGB_SHIDS Glucosamine-6-phosphate deaminase OS=Shigella dysenteriae serotype
1 (strain Sd197) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|Q324M6|NAGB_SHIBS Glucosamine-6-phosphate deaminase OS=Shigella boydii serotype 4
(strain Sb227) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|B2TU53|NAGB_SHIB3 Glucosamine-6-phosphate deaminase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|Q7MB61|NAGB_PHOLL Glucosamine-6-phosphate deaminase OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=nagB PE=3 SV=1
Length = 270
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
++MIL TG +KA A+ AIE VNHMWT+S QMHP +I++CDE AT EL+VKTVKYF
Sbjct: 198 EIMILATGLNKAQAIQAAIEGNVNHMWTISCLQMHPKSIIVCDEPATMELKVKTVKYF 255
>sp|B7LKT5|NAGB_ESCF3 Glucosamine-6-phosphate deaminase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|Q1REP9|NAGB_ECOUT Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain UTI89
/ UPEC) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|B1LLC0|NAGB_ECOSM Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|B6HYN6|NAGB_ECOSE Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain SE11)
GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|B7N9S4|NAGB_ECOLU Glucosamine-6-phosphate deaminase OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|P0A759|NAGB_ECOLI Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain K12)
GN=nagB PE=1 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|B1IY50|NAGB_ECOLC Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain ATCC
8739 / DSM 1576 / Crooks) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|Q0TK13|NAGB_ECOL5 Glucosamine-6-phosphate deaminase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|A1A8T7|NAGB_ECOK1 Glucosamine-6-phosphate deaminase OS=Escherichia coli O1:K1 / APEC
GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
>sp|A7ZXT7|NAGB_ECOHS Glucosamine-6-phosphate deaminase OS=Escherichia coli O9:H4 (strain
HS) GN=nagB PE=3 SV=1
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26 QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
+VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.130 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,432,037
Number of Sequences: 539616
Number of extensions: 811866
Number of successful extensions: 2026
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1851
Number of HSP's gapped (non-prelim): 174
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)