Query psy906
Match_columns 84
No_of_seqs 149 out of 1027
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 17:53:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy906.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/906hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hn6_A Glucosamine-6-phosphate 99.9 9.3E-26 3.2E-30 161.9 6.6 80 5-84 198-277 (289)
2 3ico_A 6PGL, 6-phosphogluconol 99.9 1.8E-23 6E-28 148.7 8.3 72 5-76 196-267 (268)
3 3tx2_A Probable 6-phosphogluco 99.9 1.3E-23 4.5E-28 147.9 7.3 71 5-75 180-250 (251)
4 3oc6_A 6-phosphogluconolactona 99.9 1.6E-23 5.4E-28 147.3 6.9 71 5-75 178-248 (248)
5 3eb9_A 6-phosphogluconolactona 99.9 3.9E-23 1.3E-27 146.5 8.2 70 8-77 195-265 (266)
6 3css_A 6-phosphogluconolactona 99.9 5.9E-22 2E-26 140.2 6.9 72 5-76 193-266 (267)
7 1y89_A DEVB protein; structura 99.8 2E-21 7E-26 135.1 6.8 69 7-75 167-237 (238)
8 1ne7_A Glucosamine-6-phosphate 99.8 5.1E-21 1.7E-25 136.4 6.5 79 5-83 177-255 (289)
9 2bkx_A Glucosamine-6-phosphate 99.8 1.4E-20 4.8E-25 130.1 5.9 69 7-75 173-241 (242)
10 1fs5_A Glucosamine-6-phosphate 99.8 1.3E-20 4.4E-25 132.2 5.5 78 6-83 178-255 (266)
11 2ri0_A Glucosamine-6-phosphate 99.8 3.9E-20 1.3E-24 127.4 6.2 69 7-75 166-234 (234)
12 3e15_A Glucose-6-phosphate 1-d 99.8 2.8E-19 9.7E-24 129.7 5.6 66 6-71 226-295 (312)
13 1vl1_A 6PGL, 6-phosphogluconol 99.8 1.5E-18 5E-23 121.0 6.8 61 6-69 172-232 (232)
14 3lwd_A 6-phosphogluconolactona 99.7 6.9E-18 2.4E-22 117.3 6.6 61 5-65 163-223 (226)
15 3lhi_A Putative 6-phosphogluco 99.7 1.1E-17 3.8E-22 116.4 5.6 57 5-62 167-223 (232)
16 3nwp_A 6-phosphogluconolactona 99.7 1.3E-17 4.6E-22 116.2 6.0 58 5-62 167-224 (233)
17 2r5f_A Transcriptional regulat 98.8 5.8E-09 2E-13 73.3 6.3 56 7-75 203-262 (264)
18 2gnp_A Transcriptional regulat 98.8 6.6E-09 2.2E-13 73.0 6.3 58 7-77 200-261 (266)
19 2w48_A Sorbitol operon regulat 98.8 7.4E-09 2.5E-13 73.8 5.9 56 7-75 254-313 (315)
20 2okg_A Central glycolytic gene 98.8 7.7E-09 2.6E-13 72.3 5.8 57 7-76 195-252 (255)
21 2o0m_A Transcriptional regulat 98.7 1.6E-08 5.6E-13 73.0 5.0 57 7-76 282-340 (345)
22 3nze_A Putative transcriptiona 98.0 4.5E-06 1.6E-10 58.6 4.6 54 10-76 209-262 (267)
23 3kv1_A Transcriptional repress 97.9 1.1E-05 3.8E-10 56.6 4.8 54 11-77 208-261 (267)
24 3efb_A Probable SOR-operon reg 97.8 1.1E-05 3.7E-10 56.5 3.5 52 11-75 213-264 (266)
25 3lkv_A Uncharacterized conserv 36.2 43 0.0015 22.5 3.9 40 33-75 247-286 (302)
26 2fn4_A P23, RAS-related protei 26.1 64 0.0022 18.9 3.1 23 27-49 13-35 (181)
27 3brc_A Conserved protein of un 25.4 42 0.0014 21.8 2.1 28 19-46 31-58 (156)
28 3oes_A GTPase rhebl1; small GT 22.4 77 0.0026 19.4 3.0 32 18-49 19-50 (201)
29 1e9r_A Conjugal transfer prote 21.1 1.4E+02 0.0049 20.9 4.5 23 24-46 53-76 (437)
30 3i3q_A Alpha-ketoglutarate-dep 21.1 41 0.0014 22.4 1.5 19 11-29 192-210 (211)
31 4d9i_A Diaminopropionate ammon 21.0 77 0.0026 22.6 3.1 26 22-47 366-392 (398)
32 1a6j_A Nitrogen regulatory IIA 20.9 1E+02 0.0035 18.7 3.3 31 15-45 7-37 (163)
33 2qor_A Guanylate kinase; phosp 20.6 1.3E+02 0.0044 18.7 3.8 16 31-46 20-35 (204)
No 1
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=99.92 E-value=9.3e-26 Score=161.91 Aligned_cols=80 Identities=43% Similarity=0.703 Sum_probs=76.7
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhcccC
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~~ 84 (84)
+.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+++.++|+|+|+.|++++||+|++||+.|..++++||+
T Consensus 198 ~~~~~P~~rITl~l~~I~~Ar~i~lla~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L~~~~~~y~~ 277 (289)
T 3hn6_A 198 DVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYELKVGTVEYFN 277 (289)
T ss_dssp CTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEESGGGTTSBHHHHHHHH
T ss_pred CCCCCCCeEEECCHHHHHccCeEEEEEcChHHHHHHHHHHhCCCCcccChHHHccCCCEEEEEcHHHHccccHhHHHHHH
Confidence 57889999999999999999999999999999999999999998889999999999999999999999999999988874
No 2
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=99.89 E-value=1.8e-23 Score=148.68 Aligned_cols=72 Identities=22% Similarity=0.165 Sum_probs=68.4
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 76 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~ 76 (84)
+.+++|++|||||++.|++||+|+|+|+|++|+++|+++++|+.+.++|+|+|+.|++++||+|++||+.|+
T Consensus 196 ~~~~~P~~rITlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L~ 267 (268)
T 3ico_A 196 DSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKLP 267 (268)
T ss_dssp CCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEEEEEEHHHHTTCC
T ss_pred CCCCCCCceEEEechhhhccceEEEEecCCCchHHHHHHhcCCCCccccccccccccceEEEecchhhhhCC
Confidence 357899999999999999999999999999999999999999988899999999999999999999999874
No 3
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=99.89 E-value=1.3e-23 Score=147.90 Aligned_cols=71 Identities=20% Similarity=0.147 Sum_probs=67.6
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l 75 (84)
+.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+|+.|++++||+|++||+.|
T Consensus 180 ~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L 250 (251)
T 3tx2_A 180 DSPKPPPQRITLTLPAIQRSREVWLVVSGEAKADAVAAAVGGADPVDVPAAGAKGIERTVWLLDEAAASQL 250 (251)
T ss_dssp CCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred CCCCCCCcEEEECHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCCCCChHHhccCCCEEEEEeHHHHhhc
Confidence 45789999999999999999999999999999999999999988889999999999999999999999876
No 4
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=99.89 E-value=1.6e-23 Score=147.27 Aligned_cols=71 Identities=20% Similarity=0.158 Sum_probs=67.3
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l 75 (84)
+.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+|+.|++++||+|++||+.|
T Consensus 178 ~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L 248 (248)
T 3oc6_A 178 DSPKPPPRRITLTLPAVQNSREVWLVVSGEAKADAVAAAVGGADPVDIPAAGAVGRERTVWLVDEAAAAKL 248 (248)
T ss_dssp CCSSSSSCEEEECHHHHTTEEEEEEEECSGGGHHHHHHHHHTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred CCCCCCCcEEEcCHHHHHhhCeEEEEEeCHHHHHHHHHHHcCCCCCCCChHHhccCCCEEEEEchHHhhCC
Confidence 45789999999999999999999999999999999999999988889999999999999999999999865
No 5
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=99.88 E-value=3.9e-23 Score=146.47 Aligned_cols=70 Identities=13% Similarity=0.147 Sum_probs=64.7
Q ss_pred CCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceec-CCcEEEEEeHHHHhhhhh
Q psy906 8 KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQM-HPCTIMICDEDATQELRV 77 (84)
Q Consensus 8 ~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~-h~~~~~~~D~~Aa~~l~~ 77 (84)
++|++|||||++.|++||+|+|+++|++|+++|+++++|+.++++|+|+||. |++++||+|++||+.|++
T Consensus 195 ~~P~~rITlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~pAs~l~~~h~~~~~~~D~~Aa~~L~~ 265 (266)
T 3eb9_A 195 KPKVWRVTLSPATIMQARNVIVLATGAEKKWVVDGILADTAHKAPVARFLRGCEGNVSFLLDKEIAENLAK 265 (266)
T ss_dssp SSCSCEEEECHHHHHTCSEEEEEECCGGGHHHHHHHHCSSCSSCCGGGGGGGCSSEEEEEEEHHHHC----
T ss_pred CCCCeEEEcCHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCccchhHHhcCCCCCEEEEEcHHHhccccc
Confidence 8999999999999999999999999999999999999999888999999999 999999999999998853
No 6
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=99.86 E-value=5.9e-22 Score=140.19 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=67.6
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCccccccccee-c-CCcEEEEEeHHHHhhhh
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQ-M-HPCTIMICDEDATQELR 76 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~-~-h~~~~~~~D~~Aa~~l~ 76 (84)
+.+++|++|||||++.|++|++|+|+++|++|+++|+++++|+.+.++|+|+|+ . |++++||+|++||+.|.
T Consensus 193 ~~~~~p~~rITltl~~I~~A~~v~~la~G~~Ka~av~~~l~g~~~~~~Pas~l~~~~h~~~~~~~D~~Aa~~l~ 266 (267)
T 3css_A 193 PTMSPKVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVRGVLSESPTDPLPVSRFLRDCRGSVTLLLDPGAGEGVC 266 (267)
T ss_dssp TTCSSCSCEEEECHHHHHHCSEEEEEECSGGGHHHHHHHHCSSCCSSCCGGGGGGGCSSEEEEEECTTTTTTTC
T ss_pred CCCCCCCceEECCHHHHHcCCEEEEEEeCHHHHHHHHHHHcCCCCCcCCHHHhccCCCCCEEEEECHHHHhhcc
Confidence 457899999999999999999999999999999999999999887889999999 8 99999999999998763
No 7
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=99.84 E-value=2e-21 Score=135.13 Aligned_cols=69 Identities=13% Similarity=0.055 Sum_probs=65.2
Q ss_pred CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcC-Ccccccccceec-CCcEEEEEeHHHHhhh
Q psy906 7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEG-VNHMWTVSAFQM-HPCTIMICDEDATQEL 75 (84)
Q Consensus 7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~-~~~~~Pas~l~~-h~~~~~~~D~~Aa~~l 75 (84)
+++|++|||||++.|++|++|+|+++|++|+++|+++++|+ .+.++|+|+|+. |++++||+|++||+.|
T Consensus 167 ~~~p~~rITltl~~i~~a~~vi~~a~G~~Ka~ai~~~l~~~~~~~~~Pas~l~~~~~~~~~~~D~~Aa~~l 237 (238)
T 1y89_A 167 PESGQLRVSKTAKVLQAAKRISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTSGVTEWYLDSDAAAKI 237 (238)
T ss_dssp TTTCCEEEEECHHHHHHSSEEEEEECSGGGHHHHHHHHHSCGGGCCCHHHHCCCSSSEEEEEEEHHHHTTT
T ss_pred CCCCCCeEECCHHHHHhCCEEEEEEeCHHHHHHHHHHHhCCCCCccCCHHHHhcCCCCEEEEEChHHHhhc
Confidence 56899999999999999999999999999999999999995 677899999999 8999999999999876
No 8
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=99.83 E-value=5.1e-21 Score=136.41 Aligned_cols=79 Identities=66% Similarity=1.003 Sum_probs=73.1
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhccc
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~ 83 (84)
+.+++|+.+||||++.|++|++++|+++|++|+++|+++++|+.+.++|+|+|+.|++++||+|++||+.|..++++|+
T Consensus 177 ~~~~vp~~~iTl~l~~l~~a~~vi~la~G~~Ka~ai~~al~g~~~~~~Pas~l~~h~~~~li~D~~aA~~L~~~~~~~~ 255 (289)
T 1ne7_A 177 ELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYF 255 (289)
T ss_dssp CGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEEGGGGTTSBHHHHHHH
T ss_pred CCCCCCCEEEECCHHHHhcCCEEEEEEcCHHHHHHHHHHHhCCCCccCchHHHccCCCEEEEEcHHHHhhcccchhhhh
Confidence 3466899999999999999999999999999999999999998888999999999999999999999999977667775
No 9
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=99.81 E-value=1.4e-20 Score=130.05 Aligned_cols=69 Identities=20% Similarity=0.329 Sum_probs=65.8
Q ss_pred CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906 7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75 (84)
Q Consensus 7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l 75 (84)
+++|++|||||++.|++|++++++++|++|+++++++++|+.+.++|+|+|+.|++++||+|++||+.|
T Consensus 173 ~~~p~~~itltl~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l 241 (242)
T 2bkx_A 173 DSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLR 241 (242)
T ss_dssp GGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHTCCCTTSGGGGGGGCSSEEEEEETTTTTTC
T ss_pred CCCCCccEEcCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCcccHHHhccCCCEEEEEchHHhccC
Confidence 567899999999999999999999999999999999999988889999999999999999999999876
No 10
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=99.81 E-value=1.3e-20 Score=132.22 Aligned_cols=78 Identities=46% Similarity=0.781 Sum_probs=71.8
Q ss_pred CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhccc
Q psy906 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83 (84)
Q Consensus 6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~ 83 (84)
.+.+|+.+||||++.|++|++++++++|++|+++|+++++|+.+.++|+|+++.|++++||+|++||+.|..++++||
T Consensus 178 ~~~~p~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~li~D~~aA~~L~~~~~~~~ 255 (266)
T 1fs5_A 178 VNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255 (266)
T ss_dssp GGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHSCCCSSSGGGGGGGCSSEEEEECSGGGTTSBHHHHHHH
T ss_pred cCCCCcEEEECChHHHhcCCEEEEEecChHHHHHHHHHhcCCCCCcCChHHHccCCCEEEEEeHHHhhhcccchHHHh
Confidence 355778888888999999999999999999999999999998888899999999999999999999999987777776
No 11
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=99.80 E-value=3.9e-20 Score=127.42 Aligned_cols=69 Identities=25% Similarity=0.313 Sum_probs=65.1
Q ss_pred CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906 7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75 (84)
Q Consensus 7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l 75 (84)
+++|++|||||++.|++|++++++++|++|+++++++++|+.+.++|+|+|+.|++++||+|++||+.|
T Consensus 166 ~~~~~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l 234 (234)
T 2ri0_A 166 EDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI 234 (234)
T ss_dssp GGSCCEEEECCHHHHHTSSEEEEEECSGGGHHHHHHHHHSCCCTTSGGGGGGGCSSEEEEEETTTTTTC
T ss_pred cCCCCceEEeCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCccchHHHhhCCCEEEEEchHHhccC
Confidence 347899999999999999999999999999999999999988889999999999999999999999864
No 12
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=99.77 E-value=2.8e-19 Score=129.73 Aligned_cols=66 Identities=9% Similarity=-0.070 Sum_probs=61.8
Q ss_pred CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHh-cCCcc---cccccceecCCcEEEEEeHHH
Q psy906 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIE-EGVNH---MWTVSAFQMHPCTIMICDEDA 71 (84)
Q Consensus 6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~-~~~~~---~~Pas~l~~h~~~~~~~D~~A 71 (84)
.+++|++|||||++.|++|++|+|+|+|++|+++|+++++ |+++. +||+|+||.|+++++++|..+
T Consensus 226 ~~~pP~~rITlt~~~I~~Ak~v~~lv~G~~Ka~av~~~l~~g~vt~~~~~~PAS~Lq~Hp~~~vv~~~~~ 295 (312)
T 3e15_A 226 NNFDVRKRITVSLDLLGNASSKIFLLNSTDKLDLWKNMLLKSYVDVNYCLYPAVYLIDSMNTTVVTCGYT 295 (312)
T ss_dssp CSTTCSEEEEECHHHHHTCSEEEEEECSHHHHHHHHHHHHHTTTTCCTTTCHHHHHHHTSCEEEEEESCT
T ss_pred CCCCCCeEEEecHHHHhcCCeEEEEEcChHHHHHHHHHHHhCCCCCCcCccchHHHhhCCCEEEEEcCCc
Confidence 4667899999999999999999999999999999999999 98887 899999999999999998765
No 13
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=99.75 E-value=1.5e-18 Score=120.99 Aligned_cols=61 Identities=13% Similarity=0.028 Sum_probs=57.5
Q ss_pred CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeH
Q psy906 6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDE 69 (84)
Q Consensus 6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~ 69 (84)
.+++|++|||||++.|++|++|+|+++|++|+++|+++++|+ .+|+|+|+.|++++||+|+
T Consensus 172 ~~~~p~~rITltl~~I~~A~~iilla~G~~Ka~av~~~l~g~---~~Pas~l~~h~~~~~~~D~ 232 (232)
T 1vl1_A 172 SGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDT---PLPAYFVRGKEKTVWFVGK 232 (232)
T ss_dssp BTTTTBCEEEECHHHHTTCSEEEEEEESHHHHHHHHHHHTTC---CCGGGGCCCSSEEEEEEEC
T ss_pred CCCCCCCEEECCHHHHHhCCEEEEEEcCHHHHHHHHHHHhCC---CCChHHhCcCCCEEEEeCC
Confidence 467999999999999999999999999999999999999984 3999999999999999995
No 14
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=99.72 E-value=6.9e-18 Score=117.29 Aligned_cols=61 Identities=20% Similarity=0.227 Sum_probs=55.7
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEE
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~ 65 (84)
+.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+|+.|+..++
T Consensus 163 ~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~v~ 223 (226)
T 3lwd_A 163 HAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQPIATY 223 (226)
T ss_dssp CCTTSSSCEEEECHHHHTCBSCEEEEEESHHHHHHHHHHHHCCCTTTSTTHHHHTSCCEEE
T ss_pred CCCCCCCcEEEcCHHHHHhhCeEEEEEECHHHHHHHHHHHcCCCCCcCChHHHhcCCCeEE
Confidence 4678999999999999999999999999999999999999998888999999999853333
No 15
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=99.70 E-value=1.1e-17 Score=116.36 Aligned_cols=57 Identities=21% Similarity=0.251 Sum_probs=53.4
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCc
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPC 62 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~ 62 (84)
+.+++|++|||||++.|++||+|+|+++|++|+++|+++++| .+.++|+|+|+.|++
T Consensus 167 ~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g-~~~~~Pas~l~~h~~ 223 (232)
T 3lhi_A 167 TPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQG-ENREYPISLVLNHQG 223 (232)
T ss_dssp CCSSSSSCEEEECHHHHHTCSEEEEEEESHHHHHHHHHHHTS-CCTTSTHHHHHTSTT
T ss_pred CCCCCCCceEEecHHHHHhcCeEEEEEECHHHHHHHHHHHhC-CCccCcHHHHHhCCC
Confidence 457899999999999999999999999999999999999998 677899999999985
No 16
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=99.70 E-value=1.3e-17 Score=116.20 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=54.5
Q ss_pred CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCc
Q psy906 5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPC 62 (84)
Q Consensus 5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~ 62 (84)
+.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+|+.|++
T Consensus 167 ~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~ 224 (233)
T 3nwp_A 167 NPTTAPHGRITLSKSAILNSRQIYLHLVGEQKLSVYRQALESDDVHAMPIRAVLAQRK 224 (233)
T ss_dssp CCSSSSSCEEEECHHHHHSBSCEEEEEESHHHHHHHHHHHTCCCTTTCTTHHHHSCSS
T ss_pred CCCCCCCceEECCHHHHHhhCeEEEEEECHHHHHHHHHHHhCCCCCCccHHHHHhCCC
Confidence 3478999999999999999999999999999999999999998888999999999874
No 17
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=98.84 E-value=5.8e-09 Score=73.26 Aligned_cols=56 Identities=20% Similarity=0.167 Sum_probs=47.6
Q ss_pred CCCC----CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906 7 VKIP----RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75 (84)
Q Consensus 7 ~~~P----~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l 75 (84)
+.+| .+.||||+..|++++++++++.|.+|+++++.+++|+.. .++++|+++|..|
T Consensus 203 ~~V~~~~~~r~i~i~l~~l~~~~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~L 262 (264)
T 2r5f_A 203 KPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGGYL-------------DVLITDVGTARGL 262 (264)
T ss_dssp CBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHH
T ss_pred CCCCCccccceecCCHHHHcCCCCEEEEEcCHHHHHHHHHHHhcCCC-------------CEEEECHHHHHHH
Confidence 4567 899999999999999999999999999999999999742 3789999999876
No 18
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=98.82 E-value=6.6e-09 Score=73.05 Aligned_cols=58 Identities=9% Similarity=0.148 Sum_probs=51.6
Q ss_pred CCCC----CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhh
Q psy906 7 VKIP----RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV 77 (84)
Q Consensus 7 ~~~P----~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~ 77 (84)
+.+| .+.|||++..|++++++++++.|++|+++++.+++|+.. .++++|+++|..|..
T Consensus 200 ~~V~~~~~~r~i~i~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~Ll~ 261 (266)
T 2gnp_A 200 KEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRANLV-------------NHLITDKNTILKVLE 261 (266)
T ss_dssp CCCCHHHHTTBCBCCHHHHTTSSEEEEECCSGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHHHH
T ss_pred CCCCCccccceecCCHHHHcCCCCEEEEecChhhHHHHHHHHhcCCC-------------CEEEECHHHHHHHHh
Confidence 5578 899999999999999999999999999999999999742 378999999988643
No 19
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=98.80 E-value=7.4e-09 Score=73.84 Aligned_cols=56 Identities=9% Similarity=0.071 Sum_probs=50.2
Q ss_pred CCCC----CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906 7 VKIP----RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75 (84)
Q Consensus 7 ~~~P----~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l 75 (84)
+.+| .+.||||+..|+++++++++|.|++|+++++.+++|+.. .++++|+++|..|
T Consensus 254 ~~v~~~~~~~~i~~~l~~i~~~~~ii~vA~G~~Ka~Ai~~al~g~~~-------------~~LitDe~aA~~l 313 (315)
T 2w48_A 254 GLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYI-------------NCLVTNRETAELL 313 (315)
T ss_dssp CBCCCSSGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTSC-------------SEEEEEHHHHHHH
T ss_pred CEeCCccccceecCCHHHHhCCCCEEEEecChHhHHHHHHHHhCCCC-------------CEEEECHHHHHHH
Confidence 4567 899999999999999999999999999999999999742 2789999999876
No 20
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=98.79 E-value=7.7e-09 Score=72.29 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=50.2
Q ss_pred CCCC-CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906 7 VKIP-RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 76 (84)
Q Consensus 7 ~~~P-~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~ 76 (84)
+.+| .+.|||++..|++++++++++.|++|+++++.+++|+.. .++++|+++|..|.
T Consensus 195 ~~V~~~~~igi~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~LL 252 (255)
T 2okg_A 195 EVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKPRN-------------TVLVTDEGAAKKLL 252 (255)
T ss_dssp CEEEECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHHTTSCCC-------------EEEEEEHHHHHHHH
T ss_pred CCccCCceecCCHHHHhCCCCEEEEEcCHHHHHHHHHHHhCCCC-------------CEEEECHHHHHHHH
Confidence 3466 789999999999999999999999999999999999742 47899999998764
No 21
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=98.69 E-value=1.6e-08 Score=72.99 Aligned_cols=57 Identities=21% Similarity=0.186 Sum_probs=50.2
Q ss_pred CCCC-CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhc-CCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906 7 VKIP-RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEE-GVNHMWTVSAFQMHPCTIMICDEDATQELR 76 (84)
Q Consensus 7 ~~~P-~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~-~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~ 76 (84)
+.+| .+.|||++..|+++++++++|.|.+|+++++.+++| +.. +++++|+++|..|.
T Consensus 282 ~~v~~~~~i~i~l~~l~~~~~vi~vA~G~~Ka~Ai~~al~g~~~~-------------~~LitDe~aA~~ll 340 (345)
T 2o0m_A 282 KVVYKIPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKNAPKQ-------------TWLITDEAAANEIL 340 (345)
T ss_dssp CEEEECCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTTSCTT-------------CEEEEEHHHHHHHT
T ss_pred CCcCCCceecCCHHHHcCCCCEEEEEcChHHHHHHHHHHhCCCCC-------------eEEEECHHHHHHHH
Confidence 3456 779999999999999999999999999999999999 743 67899999998763
No 22
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=98.04 E-value=4.5e-06 Score=58.62 Aligned_cols=54 Identities=19% Similarity=0.254 Sum_probs=47.3
Q ss_pred CCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906 10 PRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 76 (84)
Q Consensus 10 P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~ 76 (84)
+.+.|+|++..|+++++++.++.|.+|+++++.++.|+.- .++++|+.+|..|.
T Consensus 209 ~~r~i~~~l~~l~~~~~vi~vA~G~~Ka~Ai~aal~g~~~-------------~~LITDe~tA~~lL 262 (267)
T 3nze_A 209 NERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAGLA-------------TDLILDEASARRLV 262 (267)
T ss_dssp GGGCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHHT
T ss_pred hcceecCChHHHccCCeEEEEeCChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHHH
Confidence 3788999999999999999999999999999999998631 34789999998764
No 23
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=97.92 E-value=1.1e-05 Score=56.63 Aligned_cols=54 Identities=17% Similarity=0.200 Sum_probs=47.1
Q ss_pred CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhh
Q psy906 11 RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV 77 (84)
Q Consensus 11 ~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~ 77 (84)
...|+|++..|+++++++.++.|.+|+++++.++.|..- .++++|+.+|..|..
T Consensus 208 ~~~i~~~l~~l~~~~~~i~va~G~~K~~ai~~al~~~~~-------------~~LITDe~tA~~lL~ 261 (267)
T 3kv1_A 208 GRVIGLEMEDLRQIPNVVAMASESRKALSIMGALRTGVI-------------DVLATSVSCAMALLN 261 (267)
T ss_dssp GGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTSCC-------------SEEEEEHHHHHHHHH
T ss_pred cceeecCHHHHcCCCcEEEEecChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHHHh
Confidence 478999999999999999999999999999999998631 347899999998754
No 24
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=97.84 E-value=1.1e-05 Score=56.54 Aligned_cols=52 Identities=8% Similarity=0.036 Sum_probs=45.8
Q ss_pred CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906 11 RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75 (84)
Q Consensus 11 ~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l 75 (84)
.+.|+|++..|+++++++.++.|.+|+++++.++.|..- .++++|+.+|..|
T Consensus 213 ~r~i~~~l~~l~~~~~~i~va~G~~Ka~Ai~aal~g~~~-------------~~LITDe~tA~~l 264 (266)
T 3efb_A 213 EKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGKYI-------------NCLVTNSSTAELL 264 (266)
T ss_dssp GGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHTTSC-------------SEEEEEHHHHHHH
T ss_pred cceecCCHHHHhCCCCEEEEecChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHH
Confidence 478999999999999999999999999999999998631 3468899998876
No 25
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=36.16 E-value=43 Score=22.55 Aligned_cols=40 Identities=15% Similarity=0.121 Sum_probs=29.3
Q ss_pred ChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906 33 GSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75 (84)
Q Consensus 33 G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l 75 (84)
|..=++++.++|.|+...++|.... .+..+++|...|..|
T Consensus 247 G~~aa~~a~~IL~G~~p~~ipv~~~---~~~~~~iN~~~a~~l 286 (302)
T 3lkv_A 247 GVQTADYVAAILEGKEPGSLDVQVA---KGSDLVINKTAAEQL 286 (302)
T ss_dssp HHHHHHHHHHHHTTCCGGGSCCEEC---CCCEEEECHHHHHHT
T ss_pred HHHHHHHHHHHHCcCCcccCCcccc---CCcEEEEcHHHHHHc
Confidence 4444678899999987667886543 346688899998876
No 26
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=26.09 E-value=64 Score=18.90 Aligned_cols=23 Identities=17% Similarity=0.004 Sum_probs=17.0
Q ss_pred EEEEEcChhHHHHHHHHHhcCCc
Q psy906 27 VMILITGSHKAFALYKAIEEGVN 49 (84)
Q Consensus 27 v~~lv~G~~Ka~~l~~~l~~~~~ 49 (84)
+++=-.|.+|...+.+.+.+...
T Consensus 13 ~v~G~~~~GKssli~~l~~~~~~ 35 (181)
T 2fn4_A 13 VVVGGGGVGKSALTIQFIQSYFV 35 (181)
T ss_dssp EEEECTTSSHHHHHHHHHHSSCC
T ss_pred EEECCCCCCHHHHHHHHHhCcCc
Confidence 33444688999999999877543
No 27
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=25.37 E-value=42 Score=21.76 Aligned_cols=28 Identities=7% Similarity=-0.010 Sum_probs=24.6
Q ss_pred hhhcccceEEEEEcChhHHHHHHHHHhc
Q psy906 19 SSSPHFSQVMILITGSHKAFALYKAIEE 46 (84)
Q Consensus 19 ~~I~~A~~v~~lv~G~~Ka~~l~~~l~~ 46 (84)
..|.+|++|++.-.-..|-.++.+++..
T Consensus 31 ~~I~nakkIvV~t~N~kKf~vi~~il~~ 58 (156)
T 3brc_A 31 KYIRSARRTVVPNWNAEKVDAINDVLRS 58 (156)
T ss_dssp HHHHHCSCEEECCCCHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEecCCchHhHHHHHHHHH
Confidence 3578999999999999999999999964
No 28
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=22.39 E-value=77 Score=19.40 Aligned_cols=32 Identities=9% Similarity=-0.113 Sum_probs=20.8
Q ss_pred chhhcccceEEEEEcChhHHHHHHHHHhcCCc
Q psy906 18 SSSSPHFSQVMILITGSHKAFALYKAIEEGVN 49 (84)
Q Consensus 18 ~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~ 49 (84)
++....-+-+++=-.|.+|...+.+++.+...
T Consensus 19 ~~~~~~~ki~vvG~~~~GKSsli~~l~~~~~~ 50 (201)
T 3oes_A 19 MPLVRYRKVVILGYRCVGKTSLAHQFVEGEFS 50 (201)
T ss_dssp ----CEEEEEEEESTTSSHHHHHHHHHHSCCC
T ss_pred CCCCCcEEEEEECCCCcCHHHHHHHHHhCCCC
Confidence 34444444555666888999999999987644
No 29
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=21.14 E-value=1.4e+02 Score=20.94 Aligned_cols=23 Identities=17% Similarity=0.124 Sum_probs=16.6
Q ss_pred cceEEEEE-cChhHHHHHHHHHhc
Q psy906 24 FSQVMILI-TGSHKAFALYKAIEE 46 (84)
Q Consensus 24 A~~v~~lv-~G~~Ka~~l~~~l~~ 46 (84)
..+++++. +|.+|...+..++..
T Consensus 53 ~~h~~i~G~tGsGKs~~~~~li~~ 76 (437)
T 1e9r_A 53 PRHLLVNGATGTGKSVLLRELAYT 76 (437)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHH
T ss_pred cceEEEECCCCCCHHHHHHHHHHH
Confidence 45555554 999999998777653
No 30
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=21.06 E-value=41 Score=22.36 Aligned_cols=19 Identities=5% Similarity=-0.032 Sum_probs=12.6
Q ss_pred CeeEEEcchhhcccceEEE
Q psy906 11 RTEKSLYSSSSPHFSQVMI 29 (84)
Q Consensus 11 ~~riTlt~~~I~~A~~v~~ 29 (84)
..||++|+..+..+.+++|
T Consensus 192 ~~RIsLTFR~~~~~~~~~~ 210 (211)
T 3i3q_A 192 DCRYNLTFRQAGKKENLYF 210 (211)
T ss_dssp TCEEEEEEECCSCC-----
T ss_pred CCEEEEEeeeccCCcCcee
Confidence 5699999999998888776
No 31
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=21.04 E-value=77 Score=22.55 Aligned_cols=26 Identities=15% Similarity=0.159 Sum_probs=19.4
Q ss_pred cccceEEEEEcChhH-HHHHHHHHhcC
Q psy906 22 PHFSQVMILITGSHK-AFALYKAIEEG 47 (84)
Q Consensus 22 ~~A~~v~~lv~G~~K-a~~l~~~l~~~ 47 (84)
..-++|+++.||-++ .+.++++++..
T Consensus 366 ~~~~~Vv~i~tGG~~d~~~~~~~~~~g 392 (398)
T 4d9i_A 366 NKDAVVLVISTEGDTDVKHYREVVWEG 392 (398)
T ss_dssp CTTCEEEEEECBCCSSHHHHHHHHTTC
T ss_pred CCCCEEEEEeCCCCCCHHHHHHHHhcc
Confidence 345788999999877 66778888754
No 32
>1a6j_A Nitrogen regulatory IIA protein; phosphotransferase system, nitrogen regulation; 2.35A {Escherichia coli} SCOP: d.112.1.1
Probab=20.93 E-value=1e+02 Score=18.74 Aligned_cols=31 Identities=23% Similarity=-0.041 Sum_probs=25.3
Q ss_pred EEcchhhcccceEEEEEcChhHHHHHHHHHh
Q psy906 15 SLYSSSSPHFSQVMILITGSHKAFALYKAIE 45 (84)
Q Consensus 15 Tlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~ 45 (84)
+|.+..+.+-+.|++-....+|.++++.+.+
T Consensus 7 ~m~l~~~l~~~~i~~~~~~~~k~e~i~~~~~ 37 (163)
T 1a6j_A 7 TLQLSSVLNRECTRSRVHCQSKKRALEIISE 37 (163)
T ss_dssp -CCGGGTCCGGGEEEEECCSSHHHHHHHHHH
T ss_pred cCcHHHhcCcccEEeCCCCCCHHHHHHHHHH
Confidence 3566788888999999999999999988763
No 33
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=20.59 E-value=1.3e+02 Score=18.69 Aligned_cols=16 Identities=25% Similarity=0.293 Sum_probs=12.9
Q ss_pred EcChhHHHHHHHHHhc
Q psy906 31 ITGSHKAFALYKAIEE 46 (84)
Q Consensus 31 v~G~~Ka~~l~~~l~~ 46 (84)
.+|.+|..+.+.+.+.
T Consensus 20 ~sGsGKsTl~~~L~~~ 35 (204)
T 2qor_A 20 PSGVGKGTLIKKVLSE 35 (204)
T ss_dssp CTTSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh
Confidence 4899999998887653
Done!