BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9066
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P08510|KCNAS_DROME Potassium voltage-gated channel protein Shaker OS=Drosophila
melanogaster GN=Sh PE=1 SV=3
Length = 655
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 76/89 (85%), Gaps = 3/89 (3%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G + PVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 429 IPDAFW--WAVVTMTTVGYG-DMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 485
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGE 114
HRETDQE+MQSQNFNHVTSCPYLPGTLG+
Sbjct: 486 HRETDQEEMQSQNFNHVTSCPYLPGTLGQ 514
>sp|P15385|KCNA4_RAT Potassium voltage-gated channel subfamily A member 4 OS=Rattus
norvegicus GN=Kcna4 PE=1 SV=1
Length = 655
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G ++P+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 513 IPDAFW--WAVVTMTTVGYG-DMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 569
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSS 122
HRET+ E+ Q+Q + SCPYLP L + ++SS
Sbjct: 570 HRETENEE-QTQLTQNAVSCPYLPSNLLKKFRSSTSS 605
>sp|Q61423|KCNA4_MOUSE Potassium voltage-gated channel subfamily A member 4 OS=Mus
musculus GN=Kcna4 PE=1 SV=2
Length = 654
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G ++P+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 512 IPDAFW--WAVVTMTTVGYG-DMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 568
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSS 122
HRET+ E+ Q+Q + SCPYLP L + ++SS
Sbjct: 569 HRETENEE-QTQLTQNAVSCPYLPSNLLKKFRSSTSS 604
>sp|Q28527|KCNA4_MUSPF Potassium voltage-gated channel subfamily A member 4 OS=Mustela
putorius furo GN=KCNA4 PE=2 SV=1
Length = 654
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G ++P+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 512 IPDAFW--WAVVTMTTVGYG-DMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 568
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSS 122
HRET+ E+ Q+Q + SCPYLP L + ++SS
Sbjct: 569 HRETENEE-QTQLTQNAVSCPYLPSNLLKKFRSSTSS 604
>sp|P22459|KCNA4_HUMAN Potassium voltage-gated channel subfamily A member 4 OS=Homo
sapiens GN=KCNA4 PE=1 SV=2
Length = 653
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G ++P+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 511 IPDAFW--WAVVTMTTVGYG-DMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 567
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSS 122
HRET+ E+ Q+Q + SCPYLP L + ++SS
Sbjct: 568 HRETENEE-QTQLTQNAVSCPYLPSNLLKKFRSSTSS 603
>sp|Q05037|KCNA4_BOVIN Potassium voltage-gated channel subfamily A member 4 OS=Bos taurus
GN=KCNA4 PE=2 SV=1
Length = 660
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G ++P+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 519 IPDAFW--WAVVTMTTVGYG-DMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 575
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSS 122
HRET+ E+ Q+Q + SCPYLP L + ++SS
Sbjct: 576 HRETENEE-QTQLTQNAVSCPYLPSNLLKKFRSSTSS 611
>sp|P63142|KCNA2_RAT Potassium voltage-gated channel subfamily A member 2 OS=Rattus
norvegicus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 12/128 (9%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + P + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 361 IPDAFW--WAVVSMTTVGYGDMV-PTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 417
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSSRSRKVAAATGL--VHNDVGSSWE 143
HRET+ E+ Q+Q + VTSCP +P + D SRS + + + V +S E
Sbjct: 418 HRETEGEE-QAQ-YLQVTSCPKIPSS-----PDLKKSRSASTISKSDYMEIQEGVNNSNE 470
Query: 144 DMQSQNFN 151
D + +N
Sbjct: 471 DFREENLK 478
>sp|P63141|KCNA2_MOUSE Potassium voltage-gated channel subfamily A member 2 OS=Mus
musculus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 12/128 (9%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + P + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 361 IPDAFW--WAVVSMTTVGYGDMV-PTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 417
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSSRSRKVAAATGL--VHNDVGSSWE 143
HRET+ E+ Q+Q + VTSCP +P + D SRS + + + V +S E
Sbjct: 418 HRETEGEE-QAQ-YLQVTSCPKIPSS-----PDLKKSRSASTISKSDYMEIQEGVNNSNE 470
Query: 144 DMQSQNFN 151
D + +N
Sbjct: 471 DFREENLK 478
>sp|Q28293|KCNA2_CANFA Potassium voltage-gated channel subfamily A member 2 OS=Canis
familiaris GN=KCNA2 PE=2 SV=1
Length = 499
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 12/128 (9%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + P + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 361 IPDAFW--WAVVSMTTVGYGDMV-PTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 417
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSSRSRKVAAATGL--VHNDVGSSWE 143
HRET+ E+ Q+Q + VTSCP +P + D SRS + + + V +S E
Sbjct: 418 HRETEGEE-QAQ-YLQVTSCPKIPSS-----PDLKKSRSASTISKSDYMEIQEGVNNSNE 470
Query: 144 DMQSQNFN 151
D + +N
Sbjct: 471 DFREENLK 478
>sp|P16389|KCNA2_HUMAN Potassium voltage-gated channel subfamily A member 2 OS=Homo
sapiens GN=KCNA2 PE=1 SV=2
Length = 499
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 12/128 (9%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + P + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 361 IPDAFW--WAVVSMTTVGYGDMV-PTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 417
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSSRSRKVAAATGL--VHNDVGSSWE 143
HRET+ E+ Q+Q + VTSCP +P + D SRS + + + V +S E
Sbjct: 418 HRETEGEE-QAQ-YLQVTSCPKIPSS-----PDLKKSRSASTISKSDYMEIQEGVNNSNE 470
Query: 144 DMQSQNFN 151
D + +N
Sbjct: 471 DFREENLK 478
>sp|P22739|KCNA2_XENLA Potassium voltage-gated channel subfamily A member 2 OS=Xenopus
laevis GN=kcna2 PE=3 SV=2
Length = 499
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 12/126 (9%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + P + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 361 IPDAFW--WAVVSMTTVGYGDMV-PTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 417
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSSRSRKVAAATGL--VHNDVGSSWE 143
HRET+ E+ Q+Q + VTSCP +P + D SRS + + + V S E
Sbjct: 418 HRETEGEE-QAQ-YLQVTSCPKIPSS-----PDLQKSRSASTLSKSDYMEIQEGVNHSNE 470
Query: 144 DMQSQN 149
D + +N
Sbjct: 471 DFREKN 476
>sp|P22001|KCNA3_HUMAN Potassium voltage-gated channel subfamily A member 3 OS=Homo
sapiens GN=KCNA3 PE=2 SV=3
Length = 575
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G + PV + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 431 IPDAFW--WAVVTMTTVGYG-DMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 487
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSS 122
HRET+ E+ QSQ + HV SC +L + E S+S
Sbjct: 488 HRETEGEE-QSQ-YMHVGSCQHLSSSAEELRKARSNS 522
>sp|P16390|KCNA3_MOUSE Potassium voltage-gated channel subfamily A member 3 OS=Mus
musculus GN=Kcna3 PE=2 SV=3
Length = 528
Score = 94.0 bits (232), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G + PV + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 384 IPDAFW--WAVVTMTTVGYG-DMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 440
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSS 122
HRET+ E+ Q+Q + HV SC +L + E S+S
Sbjct: 441 HRETEGEE-QAQ-YMHVGSCQHLSSSAEELRKARSNS 475
>sp|P15384|KCNA3_RAT Potassium voltage-gated channel subfamily A member 3 OS=Rattus
norvegicus GN=Kcna3 PE=1 SV=2
Length = 525
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G + PV + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 381 IPDAFW--WAVVTMTTVGYG-DMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 437
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSS 122
HRET+ E+ Q+Q + HV SC +L + E S+S
Sbjct: 438 HRETEGEE-QAQ-YMHVGSCQHLSSSAEELRKARSNS 472
>sp|P79197|KCNA5_MUSPF Potassium voltage-gated channel subfamily A member 5 OS=Mustela
putorius furo GN=KCNA5 PE=2 SV=1
Length = 601
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G +RPV V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 455 IPDAFW--WAVVTMTTVGYG-DMRPVTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 511
Query: 86 HRETDQEDMQS 96
HRETD E+ +
Sbjct: 512 HRETDHEEQAA 522
>sp|P50638|KCNA5_RABIT Potassium voltage-gated channel subfamily A member 5 OS=Oryctolagus
cuniculus GN=KCNA5 PE=2 SV=1
Length = 598
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G +RP+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 452 IPDAFW--WAVVTMTTVGYG-DMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 508
Query: 86 HRETDQEDMQS 96
HRETD E+ +
Sbjct: 509 HRETDHEEQAA 519
>sp|P19024|KCNA5_RAT Potassium voltage-gated channel subfamily A member 5 OS=Rattus
norvegicus GN=Kcna5 PE=1 SV=1
Length = 602
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G +RP+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 456 IPDAFW--WAVVTMTTVGYG-DMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 512
Query: 86 HRETDQEDMQS 96
HRETD E+ +
Sbjct: 513 HRETDHEEQAA 523
>sp|Q61762|KCNA5_MOUSE Potassium voltage-gated channel subfamily A member 5 OS=Mus
musculus GN=Kcna5 PE=2 SV=2
Length = 602
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G +RP+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 456 IPDAFW--WAVVTMTTVGYG-DMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 512
Query: 86 HRETDQEDMQS 96
HRETD E+ +
Sbjct: 513 HRETDHEEQAA 523
>sp|P22460|KCNA5_HUMAN Potassium voltage-gated channel subfamily A member 5 OS=Homo
sapiens GN=KCNA5 PE=1 SV=4
Length = 613
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 3/68 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G +RP+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 467 IPDAFW--WAVVTMTTVGYG-DMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 523
Query: 86 HRETDQED 93
HRETD E+
Sbjct: 524 HRETDHEE 531
>sp|P17659|KCNA6_RAT Potassium voltage-gated channel subfamily A member 6 OS=Rattus
norvegicus GN=Kcna6 PE=2 SV=1
Length = 530
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G + P+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 410 IPDAFW--WAVVTMTTVGYG-DMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 466
Query: 86 HRETDQEDMQSQNFNHVT 103
HRET+QE+ Q Q + HVT
Sbjct: 467 HRETEQEE-QGQ-YTHVT 482
>sp|Q61923|KCNA6_MOUSE Potassium voltage-gated channel subfamily A member 6 OS=Mus
musculus GN=Kcna6 PE=1 SV=1
Length = 529
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G + P+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 409 IPDAFW--WAVVTMTTVGYG-DMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 465
Query: 86 HRETDQEDMQSQNFNHVT 103
HRET+QE+ Q Q + HVT
Sbjct: 466 HRETEQEE-QGQ-YTHVT 481
>sp|P17658|KCNA6_HUMAN Potassium voltage-gated channel subfamily A member 6 OS=Homo
sapiens GN=KCNA6 PE=1 SV=1
Length = 529
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W T T + +G + P+ V GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 409 IPDAFW--WAVVTMTTVGYG-DMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 465
Query: 86 HRETDQEDMQSQNFNHVT 103
HRET+QE+ Q Q + HVT
Sbjct: 466 HRETEQEE-QGQ-YTHVT 481
>sp|Q9I830|KCNA2_ONCMY Potassium voltage-gated channel subfamily A member 2
OS=Oncorhynchus mykiss GN=kcna2 PE=2 SV=1
Length = 494
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 24/144 (16%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + P + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 356 IPDAFW--WAVVSMTTVGYGDMV-PTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 412
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSSRSRKVAAATGLVHND-------V 138
HRET+ E+ Q+Q VT ++S+ +K + + + +D V
Sbjct: 413 HRETEGEE-QAQCLGPVTK-------------EDSNEELKKSRSGSTISKSDYMEIQEGV 458
Query: 139 GSSWEDMQSQNFNHVTSCPYLPGT 162
++ ED+ +N +C L T
Sbjct: 459 NNTIEDIPEENLKTQANCTTLANT 482
>sp|Q9I829|KCNA1_ONCMY Shaker-related potassium channel tsha2 OS=Oncorhynchus mykiss PE=2
SV=1
Length = 483
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 74/123 (60%), Gaps = 12/123 (9%)
Query: 29 AMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRE 88
A W W + T + +G + PV + GKIVGS+CAIAGVLTIALPVPVIVSNFNYFYHRE
Sbjct: 361 AFW--WAVVSMTTVGYG-DMCPVTIGGKIVGSMCAIAGVLTIALPVPVIVSNFNYFYHRE 417
Query: 89 TDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSSRSRKVAAATGLVHNDVGSSWEDMQSQ 148
+ E ++ + HVT C + GE+ S+S SR+ + D S E ++
Sbjct: 418 RNDE--ETAVYTHVT-CGQQNASFGEF---KSTSDSRQSLTKSEDTEED---SCETIRLT 468
Query: 149 NFN 151
+FN
Sbjct: 469 HFN 471
>sp|Q17ST2|KCNA7_MOUSE Potassium voltage-gated channel subfamily A member 7 OS=Mus
musculus GN=Kcna7 PE=2 SV=2
Length = 489
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ E+ W W T T + +G + PV V GKIVGSLCAIAGVLTI+LPVPVIVSNF+YFY
Sbjct: 378 IPESFW--WAVVTMTTVGYG-DMAPVTVGGKIVGSLCAIAGVLTISLPVPVIVSNFSYFY 434
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDN 119
HRET+ E+ + C L G LVD+
Sbjct: 435 HRETEGEEAGMYSHVDTQPCGTLEGKANGGLVDS 468
>sp|Q96RP8|KCNA7_HUMAN Potassium voltage-gated channel subfamily A member 7 OS=Homo
sapiens GN=KCNA7 PE=2 SV=1
Length = 456
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 63/97 (64%), Gaps = 7/97 (7%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ E+ W W T T + +G + PV V GKIVGSLCAIAGVLTI+LPVPVIVSNF+YFY
Sbjct: 345 IPESFW--WAVVTMTTVGYG-DMAPVTVGGKIVGSLCAIAGVLTISLPVPVIVSNFSYFY 401
Query: 86 HRETDQEDMQSQNFNHV--TSCPYLPGTLGEWLVDNS 120
HRET+ E ++ F+HV C L G LVD
Sbjct: 402 HRETEGE--EAGMFSHVDMQPCGPLEGKANGGLVDGE 436
>sp|P10499|KCNA1_RAT Potassium voltage-gated channel subfamily A member 1 OS=Rattus
norvegicus GN=Kcna1 PE=1 SV=1
Length = 495
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + PV + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 359 IPDAFW--WAVVSMTTVGYG-DMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 415
Query: 86 HRETDQEDMQSQNFNHVTS 104
HRET+ E+ Q+Q HV+S
Sbjct: 416 HRETEGEE-QAQ-LLHVSS 432
>sp|Q09470|KCNA1_HUMAN Potassium voltage-gated channel subfamily A member 1 OS=Homo
sapiens GN=KCNA1 PE=1 SV=2
Length = 495
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + PV + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 359 IPDAFW--WAVVSMTTVGYG-DMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 415
Query: 86 HRETDQEDMQSQNFNHVTS 104
HRET+ E+ Q+Q HV+S
Sbjct: 416 HRETEGEE-QAQ-LLHVSS 432
>sp|P16388|KCNA1_MOUSE Potassium voltage-gated channel subfamily A member 1 OS=Mus
musculus GN=Kcna1 PE=2 SV=1
Length = 495
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ +A W W + T + +G + PV + GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 359 IPDAFW--WAVVSMTTVGYG-DMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 415
Query: 86 HRETDQEDMQSQNFNHVTS 104
HRET+ E+ Q+Q HV+S
Sbjct: 416 HRETEGEE-QAQ-LLHVSS 432
>sp|Q7T199|KCA10_CHICK Potassium voltage-gated channel subfamily A member 10 OS=Gallus
gallus GN=KCNA10 PE=2 SV=1
Length = 516
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQED 93
W T T + +G + P + GKIVG+LCAIAGVLTIALPVPVIVSNFNYFYHRET+ E+
Sbjct: 419 WAVVTMTTVGYG-DMCPTTLGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEE 477
Query: 94 MQ 95
Q
Sbjct: 478 KQ 479
>sp|Q16322|KCA10_HUMAN Potassium voltage-gated channel subfamily A member 10 OS=Homo
sapiens GN=KCNA10 PE=1 SV=2
Length = 511
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ + W W T T + +G + P GKIVG+LCAIAGVLTIALPVPVIVSNFNYFY
Sbjct: 408 IPDGFW--WAVVTMTTVGYG-DMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFY 464
Query: 86 HRETDQEDMQS 96
HRET+ E+ Q+
Sbjct: 465 HRETENEEKQN 475
>sp|Q14721|KCNB1_HUMAN Potassium voltage-gated channel subfamily B member 1 OS=Homo
sapiens GN=KCNB1 PE=1 SV=2
Length = 858
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 370 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 427
>sp|Q9MZ19|KCNB1_RABIT Potassium voltage-gated channel subfamily B member 1 OS=Oryctolagus
cuniculus GN=KCNB1 PE=2 SV=1
Length = 858
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 370 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 427
>sp|Q03717|KCNB1_MOUSE Potassium voltage-gated channel subfamily B member 1 OS=Mus
musculus GN=Kcnb1 PE=1 SV=2
Length = 857
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 370 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 427
>sp|O18868|KCNB1_PIG Potassium voltage-gated channel subfamily B member 1 OS=Sus scrofa
GN=KCNB1 PE=2 SV=1
Length = 858
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 370 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 427
>sp|Q4ZHA6|KCNB2_BOVIN Potassium voltage-gated channel subfamily B member 2 OS=Bos taurus
GN=KCNB2 PE=2 SV=1
Length = 911
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 374 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 431
>sp|Q92953|KCNB2_HUMAN Potassium voltage-gated channel subfamily B member 2 OS=Homo
sapiens GN=KCNB2 PE=2 SV=2
Length = 911
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 374 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 431
>sp|Q63099|KCNB2_RAT Potassium voltage-gated channel subfamily B member 2 OS=Rattus
norvegicus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 374 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 431
>sp|P15387|KCNB1_RAT Potassium voltage-gated channel subfamily B member 1 OS=Rattus
norvegicus GN=Kcnb1 PE=1 SV=3
Length = 857
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 370 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 427
>sp|A6H8H5|KCNB2_MOUSE Potassium voltage-gated channel subfamily B member 2 OS=Mus
musculus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 65.9 bits (159), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 374 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 431
>sp|Q95L11|KCNB2_RABIT Potassium voltage-gated channel subfamily B member 2 OS=Oryctolagus
cuniculus GN=KCNB2 PE=2 SV=1
Length = 911
Score = 65.5 bits (158), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GKIVG LC IAGVL IALP+P+IV+NF+ FY + QE
Sbjct: 374 WATITMTTVGYG-DIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQE 431
>sp|P17971|KCNAL_DROME Potassium voltage-gated channel protein Shal OS=Drosophila
melanogaster GN=Shal PE=1 SV=2
Length = 571
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ A W + T T L +G + P + GKIVG +C+++GVL IALPVPVIVSNF+ Y
Sbjct: 357 IPAAFW--YTIVTMTTLGYGDMV-PETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIY 413
Query: 86 HRETDQEDMQSQNFNHVTSCPYLPGTLGEWLVDNSSSRSRKVAAATGLVHNDVGSSWEDM 145
H+ + ++Q + + G V + + AA + D ED+
Sbjct: 414 HQNQRADKRKAQRKARLARIRIAKASSGAAFVSKKKAAEARWAAQESGIELDDNYRDEDI 473
Query: 146 QSQNFNHVTSC 156
+H+ C
Sbjct: 474 FELQHHHLLRC 484
>sp|Q8I4B0|KCNSK_CAEEL Potassium voltage-gated channel protein shk-1 OS=Caenorhabditis
elegans GN=shk-1 PE=2 SV=1
Length = 536
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 50 PVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEDMQSQ 97
P+ +GK+VG +CA+ GVLT+ALPVP+IV+NF +FY +E M+S+
Sbjct: 480 PLSPFGKVVGGMCAMIGVLTLALPVPIIVANFKHFYRQENRLASMKSK 527
>sp|Q95167|KCNB2_CANFA Potassium voltage-gated channel subfamily B member 2 (Fragment)
OS=Canis familiaris GN=KCNB2 PE=2 SV=2
Length = 809
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 92
W T T T + +G I P + GK VG LC IAGVL IALP+P+IV F+ FY + QE
Sbjct: 374 WATITMTTVGYG-DIYPKTLLGKSVGGLCCIAGVLVIALPIPIIVPPFSEFYKEQKRQE 431
>sp|G5EFC3|KCNAG_CAEEL Potassium voltage-gated channel protein egl-36 OS=Caenorhabditis
elegans GN=egl-36 PE=1 SV=1
Length = 558
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 34 WGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
W T T + +G + P +G++VGSLCA+ GVLTIALPVPVIVSNF FY
Sbjct: 399 WAICTMTTVGYG-DMTPHTSFGRLVGSLCAVMGVLTIALPVPVIVSNFAMFY 449
>sp|Q9NSA2|KCND1_HUMAN Potassium voltage-gated channel subfamily D member 1 OS=Homo
sapiens GN=KCND1 PE=1 SV=2
Length = 647
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ A W + T T L +G + P + GKI GS+C+++GVL IALPVPVIVSNF+ Y
Sbjct: 359 IPAAFW--YTIVTMTTLGYGDMV-PSTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY 415
Query: 86 HRETDQEDMQSQN 98
H+ + ++Q
Sbjct: 416 HQNQRADKRRAQQ 428
>sp|Q52PG9|KCND1_BOVIN Potassium voltage-gated channel subfamily D member 1 OS=Bos taurus
GN=KCND1 PE=2 SV=1
Length = 648
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ A W + T T L +G + P + GKI GS+C+++GVL IALPVPVIVSNF+ Y
Sbjct: 359 IPAAFW--YTIVTMTTLGYGDMV-PSTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY 415
Query: 86 HRETDQEDMQSQN 98
H+ + ++Q
Sbjct: 416 HQNQRADKRRAQQ 428
>sp|Q62897|KCND3_RAT Potassium voltage-gated channel subfamily D member 3 OS=Rattus
norvegicus GN=Kcnd3 PE=1 SV=2
Length = 655
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 38 TRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEDMQSQ 97
T T L +G + P + GKI GS+C+++GVL IALPVPVIVSNF+ YH+ + ++Q
Sbjct: 364 TMTTLGYGDMV-PKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQ 422
Query: 98 N 98
Sbjct: 423 K 423
>sp|Q9Z0V1|KCND3_MOUSE Potassium voltage-gated channel subfamily D member 3 OS=Mus
musculus GN=Kcnd3 PE=1 SV=1
Length = 655
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 38 TRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEDMQSQ 97
T T L +G + P + GKI GS+C+++GVL IALPVPVIVSNF+ YH+ + ++Q
Sbjct: 364 TMTTLGYGDMV-PKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQ 422
Query: 98 N 98
Sbjct: 423 K 423
>sp|Q03719|KCND1_MOUSE Potassium voltage-gated channel subfamily D member 1 OS=Mus
musculus GN=Kcnd1 PE=1 SV=1
Length = 651
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 26 VVEAMWQMWGTNTRTELLFGIHIRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 85
+ A W + T T L +G + P + GKI GS+C+++GVL IALPVPVIVSNF+ Y
Sbjct: 359 IPAAFW--YTIVTMTTLGYGDMV-PSTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIY 415
Query: 86 HRETDQEDMQSQN 98
H+ + ++Q
Sbjct: 416 HQNQRADKRRAQQ 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,150,061
Number of Sequences: 539616
Number of extensions: 4101769
Number of successful extensions: 10201
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 10065
Number of HSP's gapped (non-prelim): 128
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)