Query psy9084
Match_columns 103
No_of_seqs 119 out of 444
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 18:27:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9084.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9084hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x6u_A T-box transcription fac 100.0 3.8E-40 1.3E-44 244.2 7.8 99 4-103 23-173 (203)
2 4a04_A T-box transcription fac 100.0 3.6E-39 1.2E-43 238.9 8.8 99 4-103 33-186 (203)
3 1xbr_A Protein (T protein); co 100.0 5.4E-39 1.9E-43 235.0 8.6 93 4-103 19-162 (184)
4 1h6f_A T-box transcription fac 100.0 4.2E-39 1.4E-43 237.0 6.3 97 4-103 22-170 (193)
5 3k2i_A Acyl-coenzyme A thioest 72.9 4.7 0.00016 30.4 4.6 44 7-50 5-49 (422)
6 2dkm_A Collagen alpha-1(XX) ch 68.5 6.6 0.00023 23.8 3.8 21 22-42 62-82 (104)
7 3k2m_C Monobody HA4; engineere 65.7 7.8 0.00027 23.4 3.7 27 20-46 59-85 (101)
8 3hlk_A Acyl-coenzyme A thioest 64.5 7.5 0.00026 29.8 4.2 43 8-50 22-65 (446)
9 2b5i_B Interleukin-2 receptor 64.4 12 0.0004 26.1 4.9 42 21-62 165-206 (214)
10 3qht_C Monobody YSMB-1; fibron 64.4 6.7 0.00023 23.4 3.2 23 21-43 58-80 (97)
11 2rb8_A Tenascin; beta sheet,lo 63.8 6.8 0.00023 23.8 3.2 22 21-42 56-77 (104)
12 3t04_D Monobody 7C12; engineer 63.6 8.3 0.00028 23.4 3.6 22 20-41 63-84 (103)
13 3tes_A Tencon; fibronectin typ 63.1 7.2 0.00025 23.5 3.2 23 20-42 54-76 (98)
14 1j8k_A Fibronectin; EDA, TYPEI 62.6 5.4 0.00018 23.4 2.5 23 20-42 54-76 (94)
15 2e7h_A Ephrin type-B receptor 61.5 11 0.00036 22.7 3.8 22 21-42 64-85 (109)
16 3teu_A Fibcon; FN3 domain, fib 61.3 8.3 0.00028 22.7 3.2 23 20-42 54-76 (98)
17 2dn7_A Receptor-type tyrosine- 61.1 9.3 0.00032 22.6 3.4 22 21-42 62-83 (107)
18 2djs_A Ephrin type-B receptor 61.1 9.4 0.00032 22.7 3.5 24 20-43 62-85 (108)
19 3b83_A Ten-D3; beta sheet, com 60.7 8.4 0.00029 23.1 3.2 23 20-42 54-76 (100)
20 2edd_A Netrin receptor DCC; tu 60.6 7.2 0.00025 24.6 3.0 23 20-42 77-99 (123)
21 2cum_A Tenascin-X; hexabrachio 60.5 8.5 0.00029 23.4 3.2 23 20-42 58-80 (105)
22 1uc6_A CNTF receptor, ciliary 59.9 6.2 0.00021 24.1 2.5 24 20-43 66-89 (109)
23 2cuh_A Tenascin-X; fibronectin 59.6 8.4 0.00029 23.6 3.1 22 21-42 59-80 (115)
24 1va9_A DOWN syndrome cell adhe 59.5 12 0.00041 22.5 3.8 24 20-43 77-100 (122)
25 2cui_A Tenascin-X; fibronectin 59.1 8.9 0.00031 24.2 3.2 22 21-42 70-91 (112)
26 3fpu_B C-C motif chemokine 3; 57.6 2.6 9E-05 25.1 0.4 15 3-17 36-50 (70)
27 1x5j_A Neogenin; RGM binding, 56.9 7.8 0.00027 24.1 2.6 23 20-42 67-89 (113)
28 1x4y_A Biregional cell adhesio 56.8 12 0.00039 22.7 3.4 22 21-42 69-90 (114)
29 2ed8_A Netrin receptor DCC; tu 56.4 11 0.00039 22.2 3.3 23 20-42 60-82 (106)
30 1uen_A KIAA0343 protein; immun 56.0 12 0.00042 22.6 3.4 23 20-42 79-101 (125)
31 2haz_A N-CAM 1, neural cell ad 56.0 11 0.00039 22.5 3.2 24 19-42 64-87 (105)
32 2dju_A Receptor-type tyrosine- 55.9 13 0.00045 21.7 3.5 23 20-42 60-82 (106)
33 2yrz_A Integrin beta-4; GP150, 55.9 13 0.00044 22.4 3.5 23 20-42 72-94 (118)
34 2ocf_D Fibronectin; estrogen r 55.6 11 0.00037 23.8 3.2 23 20-42 81-103 (121)
35 3qwq_B Adnectin; cell surface 55.3 11 0.00039 23.5 3.2 24 21-44 57-80 (114)
36 2edb_A Netrin receptor DCC; tu 55.2 13 0.00043 22.9 3.4 22 21-42 71-92 (116)
37 2dle_A Receptor-type tyrosine- 55.1 8.6 0.00029 24.0 2.6 21 21-41 59-79 (104)
38 2h41_A Fibronectin; beta sandw 55.0 8.4 0.00029 24.0 2.5 22 21-42 59-80 (95)
39 3tn2_A C-C motif chemokine 4; 54.7 3.1 0.00011 24.9 0.4 15 3-17 36-50 (68)
40 1x5g_A Neogenin; RGM binding, 54.1 13 0.00043 22.3 3.2 23 20-42 70-92 (116)
41 1x5f_A Neogenin; RGM binding, 54.1 13 0.00043 22.4 3.2 23 20-42 74-96 (120)
42 1x5z_A Receptor-type tyrosine- 53.9 12 0.0004 22.3 3.0 24 19-42 68-91 (115)
43 1rjt_A Small inducible cytokin 53.7 5.6 0.00019 23.8 1.5 15 3-17 37-52 (73)
44 1x5x_A Fibronectin type-III do 53.7 14 0.00049 22.0 3.4 23 20-42 63-85 (109)
45 2ee2_A Contactin-1; neural cel 53.0 13 0.00046 22.5 3.2 23 20-42 73-95 (119)
46 1wfn_A Sidekick 2; FN3, cell a 52.6 15 0.00053 22.1 3.5 23 20-42 73-95 (119)
47 1f9q_A Platelet factor 4; bloo 52.6 4.5 0.00015 24.1 0.9 14 3-16 37-50 (70)
48 1oww_A FN, fibronectin first t 52.5 15 0.0005 23.9 3.3 23 20-42 60-82 (98)
49 1x4x_A Fibronectin type-III do 51.8 17 0.00059 21.7 3.6 23 20-42 60-82 (106)
50 2dmk_A Midline 2 isoform 2; mi 50.9 17 0.00059 22.7 3.6 25 19-43 78-102 (127)
51 1x5a_A Ephrin type-A receptor 50.8 15 0.00052 22.3 3.2 21 23-43 64-84 (107)
52 1wfo_A Sidekick 2; FN3, cell a 50.7 16 0.00055 22.3 3.4 23 20-42 84-106 (130)
53 3n1f_C Cell adhesion molecule- 50.4 16 0.00053 22.1 3.2 23 20-42 64-86 (102)
54 1zxt_A ORF K6, VMIP-I, functio 50.4 4 0.00014 24.9 0.4 15 3-17 36-50 (76)
55 1tvx_A NAP-2, neutrophil activ 50.3 5 0.00017 24.3 0.8 15 3-17 37-51 (75)
56 2ede_A Netrin receptor DCC; tu 50.2 16 0.00053 21.8 3.2 23 20-42 68-90 (114)
57 2dm4_A Sortilin-related recept 50.0 16 0.00054 21.7 3.2 22 21-42 63-84 (108)
58 1mgs_A Human melanoma growth s 49.8 5.3 0.00018 23.9 0.9 14 3-16 36-49 (73)
59 2edy_A Receptor-type tyrosine- 49.8 7.2 0.00025 22.8 1.5 23 20-42 63-85 (103)
60 2ee3_A Collagen alpha-1(XX) ch 49.8 15 0.00053 22.8 3.2 22 21-42 60-81 (108)
61 1g2s_A Eotaxin-3; beta-BETA-be 49.7 4.2 0.00014 24.3 0.4 15 3-17 35-49 (71)
62 2edx_A Protein tyrosine phosph 49.6 18 0.00062 22.0 3.5 24 20-43 78-101 (134)
63 1x5l_A Ephrin type-A receptor 49.4 13 0.00043 22.1 2.6 23 20-42 65-87 (111)
64 1ha6_A Macrophage inflammatory 49.1 6.9 0.00024 23.1 1.3 15 3-17 33-47 (70)
65 1wf5_A Sidekick 2 protein; FNI 48.9 19 0.00066 21.6 3.5 23 20-42 75-97 (121)
66 1el0_A I-309; NMR {Synthetic} 48.9 4.5 0.00016 24.3 0.4 15 3-17 36-50 (74)
67 1b3a_A Protein (rantes); chemi 48.8 5.3 0.00018 23.5 0.7 14 3-16 34-47 (67)
68 3s9d_B Interferon alpha/beta r 48.8 15 0.0005 26.1 3.2 27 19-45 158-184 (199)
69 2db8_A Tripartite motif protei 48.7 20 0.00069 21.7 3.6 23 19-41 63-85 (110)
70 3lqm_A Interleukin-10 receptor 48.6 21 0.00071 24.2 3.9 25 20-44 154-178 (201)
71 1x5y_A Myosin binding protein 48.3 24 0.00081 21.1 3.8 23 20-42 65-87 (111)
72 2e3v_A Neural cell adhesion mo 47.5 18 0.00061 22.3 3.2 23 20-42 66-88 (122)
73 1eig_A Eotaxin-2; chemokine, c 47.3 7 0.00024 23.4 1.1 15 3-17 33-47 (73)
74 1x5h_A Neogenin; RGM binding, 47.3 15 0.00051 22.5 2.8 23 20-42 76-98 (132)
75 1cm9_A VMIP-II, protein (viral 47.1 5.9 0.0002 23.8 0.8 15 3-17 39-53 (74)
76 2q8r_E CCL14; common CC chemok 47.1 5.9 0.0002 23.2 0.8 15 3-17 33-47 (66)
77 1nr4_A CCL17, thymus and activ 47.0 5.9 0.0002 23.6 0.8 15 3-17 35-49 (71)
78 1icw_A Interleukin-8, IL-8; cy 47.0 7 0.00024 23.3 1.1 15 3-17 35-49 (72)
79 2r3z_A CXCL10, small-inducible 46.5 6.8 0.00023 23.1 1.0 15 3-17 37-52 (68)
80 1esr_A MCP-2, monocyte chemota 46.4 5 0.00017 24.2 0.4 15 3-17 37-51 (76)
81 1mi2_A Macrophage inflammatory 46.3 5.6 0.00019 23.8 0.6 14 3-16 36-49 (73)
82 1eot_A Eotaxin; cytokine, chem 46.0 5.5 0.00019 23.9 0.5 15 3-17 35-49 (74)
83 2ekj_A Collagen alpha-1(XX) ch 45.8 6.9 0.00024 23.7 1.0 22 20-41 60-81 (105)
84 1m8a_A Small inducible cytokin 45.7 6.6 0.00023 23.2 0.8 14 3-16 33-46 (70)
85 2yuw_A Myosin binding protein 45.7 21 0.00071 21.2 3.2 24 19-42 63-86 (110)
86 1x4z_A Biregional cell adhesio 45.5 23 0.00079 21.5 3.5 23 20-42 75-97 (121)
87 1uem_A KIAA1568 protein; immun 45.4 21 0.00072 21.3 3.2 23 20-42 71-93 (117)
88 4doh_B Interleukin-20 receptor 45.1 23 0.00079 24.3 3.8 24 21-44 160-183 (206)
89 2crm_A Fibronectin type-III do 44.9 25 0.00084 21.2 3.5 24 19-42 73-96 (120)
90 1g91_A MPIF-1, myeloid progeni 44.9 7.1 0.00024 23.8 0.9 15 3-17 36-50 (77)
91 2qbw_A PDZ-fibronectin fusion 44.9 19 0.00065 24.2 3.2 22 21-42 157-178 (195)
92 1bpv_A Titin, A71, connectin; 44.9 24 0.00083 21.8 3.5 24 19-42 66-89 (112)
93 1x5i_A Neogenin; RGM binding, 44.4 14 0.00047 23.1 2.3 22 21-42 81-102 (126)
94 1dok_A MCP-1, MCAF, monocyte c 44.3 7.1 0.00024 23.6 0.8 15 3-17 38-52 (77)
95 2ed9_A Netrin receptor DCC; tu 44.1 18 0.00063 21.8 2.8 23 20-42 84-106 (124)
96 2q8t_A CCL14; common CC chemok 44.0 7 0.00024 23.5 0.8 15 3-17 41-55 (74)
97 1f2l_A Fractalkine; chemoattra 43.9 5.8 0.0002 24.1 0.4 15 3-17 35-49 (76)
98 1f9p_A CTAP-III, connective ti 43.9 7.2 0.00025 24.2 0.8 15 3-17 47-61 (85)
99 3pkv_A Toxoflavin lyase (TFLA) 42.8 16 0.00054 26.4 2.6 17 4-20 199-215 (252)
100 2dlh_A Receptor-type tyrosine- 42.7 14 0.00049 22.1 2.1 25 19-43 74-98 (121)
101 3bpo_C Interleukin-13 receptor 42.5 36 0.0012 24.1 4.6 41 20-60 266-309 (314)
102 2kbg_A N-CAM 2, neural cell ad 42.4 25 0.00086 22.3 3.3 21 21-41 64-84 (114)
103 1ujt_A KIAA1568 protein; fibro 42.2 16 0.00056 23.2 2.4 22 20-41 74-95 (120)
104 2ra4_A Small-inducible cytokin 41.5 8 0.00028 23.3 0.8 15 3-17 37-51 (76)
105 2ed7_A Netrin receptor DCC; tu 41.3 14 0.00049 22.1 1.9 23 20-42 73-95 (119)
106 1k85_A Chitinase A1; fibronect 41.2 27 0.00092 20.0 3.1 22 21-42 51-72 (88)
107 4doh_R Interleukin-20 receptor 40.8 26 0.0009 24.3 3.5 24 21-44 173-196 (221)
108 1noa_A Neocarzinostatin; antib 40.8 21 0.00072 23.7 2.8 22 20-41 18-39 (113)
109 2mcm_A Macromomycin; apoprotei 40.7 21 0.00072 23.7 2.8 22 20-41 17-38 (112)
110 1x3d_A Fibronectin type-III do 40.4 18 0.00062 21.8 2.3 23 20-42 72-94 (118)
111 1eer_B Epobp, erythropoietin r 40.3 59 0.002 22.1 5.3 23 21-43 180-202 (227)
112 2ha1_A Fibronectin; beta sandw 39.9 26 0.00088 22.9 3.2 23 21-43 165-187 (201)
113 2crz_A Fibronectin type-III do 39.7 20 0.00069 21.3 2.5 23 20-42 64-86 (110)
114 3gv3_A CXCL12 protein; SDF, ch 38.8 8.6 0.0003 22.3 0.6 15 3-17 31-45 (63)
115 2dbj_A Proto-oncogene tyrosine 38.7 22 0.00074 21.8 2.5 23 20-42 78-100 (124)
116 2gee_A Hypothetical protein; f 38.0 28 0.00097 23.0 3.2 23 20-42 167-189 (203)
117 1wk0_A KIAA0970 protein; fibro 37.9 26 0.00088 23.1 2.9 22 21-42 82-103 (137)
118 1wfu_A Unnamed protein product 37.8 34 0.0012 21.7 3.5 22 21-42 75-96 (120)
119 1cd9_B G-CSF-R, protein (G-CSF 37.6 64 0.0022 21.2 5.0 23 21-43 172-194 (215)
120 2b5i_C Cytokine receptor commo 37.1 40 0.0014 22.6 3.9 24 21-44 151-174 (199)
121 1lv9_A Small inducible cytokin 36.9 9.6 0.00033 23.0 0.6 14 3-16 37-51 (77)
122 3dlq_R Interleukin-22 receptor 36.8 34 0.0012 24.1 3.6 22 21-42 167-188 (211)
123 3lpw_A A77-A78 domain from tit 35.2 35 0.0012 21.7 3.2 23 20-42 157-179 (197)
124 3cxe_C Granulocyte-macrophage 34.8 17 0.00058 24.1 1.6 39 21-61 79-117 (120)
125 3n06_B PRL-R, prolactin recept 34.6 45 0.0015 22.0 3.8 24 20-43 164-187 (210)
126 3f7q_A Integrin beta-4, GP150; 34.6 44 0.0015 22.4 3.8 22 21-42 160-181 (234)
127 2ic2_A CG9211-PA, GH03927P; IH 34.3 29 0.001 21.4 2.6 22 21-42 71-92 (115)
128 2ibg_A CG9211-PA, GH03927P; IH 34.0 36 0.0012 22.2 3.2 22 21-42 174-195 (214)
129 1qr4_A Protein (tenascin); fib 33.7 41 0.0014 21.5 3.4 23 20-42 57-79 (186)
130 2vkw_A Neural cell adhesion mo 33.4 38 0.0013 22.2 3.2 22 21-42 165-186 (209)
131 1q38_A Fibronectin; amyloid fi 33.4 20 0.00067 22.8 1.6 21 21-41 38-58 (89)
132 1axi_B HGHBP, growth hormone r 33.3 34 0.0012 23.8 3.1 25 20-44 194-218 (236)
133 3p4l_A Neogenin; iron homeosta 32.9 38 0.0013 22.2 3.2 23 20-42 165-187 (211)
134 3mi6_A Alpha-galactosidase; NE 32.4 23 0.00078 30.2 2.4 33 5-37 663-696 (745)
135 1iar_B Protein (interleukin-4 32.1 31 0.0011 23.4 2.7 42 20-62 158-199 (207)
136 1cfb_A Drosophila neuroglian; 32.0 40 0.0014 22.0 3.2 23 20-42 163-185 (205)
137 3v6o_A Leptin receptor; recept 30.9 67 0.0023 21.5 4.2 24 21-44 167-190 (206)
138 1vmc_A Stromal cell-derived fa 30.1 12 0.00042 21.9 0.3 15 3-17 38-52 (71)
139 1tdq_A Tenascin-R; extracellul 29.6 53 0.0018 22.4 3.6 22 21-42 248-269 (283)
140 1bqu_A Protein (GP130); cytoki 29.5 49 0.0017 21.6 3.3 25 20-44 163-187 (215)
141 3g9v_A Interleukin 22 receptor 29.2 19 0.00066 24.9 1.2 23 20-42 171-193 (211)
142 3s98_A Interferon alpha/beta r 29.1 44 0.0015 24.0 3.2 24 20-43 158-181 (306)
143 2gys_A Cytokine receptor commo 28.6 70 0.0024 23.8 4.3 25 20-44 376-400 (419)
144 2erj_C Cytokine receptor commo 28.5 73 0.0025 22.5 4.2 41 21-61 189-231 (247)
145 1akp_A Apokedarcidin; antibiot 28.3 25 0.00086 23.4 1.5 22 20-41 18-39 (114)
146 3nqk_A Uncharacterized protein 28.1 45 0.0015 25.6 3.2 37 9-45 99-136 (319)
147 1x4r_A PARP14 protein; WWE dom 27.7 43 0.0015 21.6 2.6 16 46-61 27-42 (99)
148 3tgx_A Interleukin-21 receptor 27.4 52 0.0018 22.6 3.2 42 20-61 163-206 (219)
149 3r8q_A Fibronectin; heparin, F 26.8 54 0.0019 22.5 3.2 24 20-43 254-277 (290)
150 1j8i_A Lymphotactin; chemokine 26.4 19 0.00066 22.6 0.7 15 3-17 33-47 (93)
151 3l5i_A Interleukin-6 receptor 26.4 56 0.0019 22.3 3.2 23 21-43 253-275 (290)
152 3p02_A Uncharacterized protein 26.0 71 0.0024 24.5 3.9 37 9-45 96-133 (317)
153 1wis_A KIAA1514 protein; FNIII 25.1 26 0.00089 21.5 1.1 22 20-41 78-99 (124)
154 1fyh_B Interferon-gamma recept 24.4 97 0.0033 21.8 4.2 21 22-42 184-204 (229)
155 2yux_A Myosin-binding protein 24.3 27 0.00093 21.2 1.1 20 20-39 73-92 (120)
156 3csg_A MBP, maltose-binding pr 23.3 60 0.002 24.5 3.1 24 21-44 424-447 (461)
157 3t1w_A Four-domain fibronectin 22.2 72 0.0025 22.7 3.2 24 20-43 330-353 (375)
158 1fnf_A Fibronectin; RGD, extra 21.3 91 0.0031 22.0 3.6 24 20-43 328-351 (368)
159 2hdl_A Small inducible cytokin 20.6 35 0.0012 20.7 1.0 14 3-16 31-49 (78)
No 1
>2x6u_A T-box transcription factor TBX5; developmental protein, DNA-binding, HOLT-ORAM-syndrome, IG-fold, nuclear protein, repressor; HET: PE4; 1.90A {Homo sapiens} PDB: 2x6v_A*
Probab=100.00 E-value=3.8e-40 Score=244.16 Aligned_cols=99 Identities=40% Similarity=0.730 Sum_probs=88.5
Q ss_pred CceeeecccCCcCCCccceEEEeCCCCCCCeeEEEEEEEccCCceeeeecc-----------------------------
Q psy9084 4 DEALCGWPWISRRMFPTFQVRLFNLDPDAEYMLMMDFVPVDDKRYRYAFHR----------------------------- 54 (103)
Q Consensus 4 ~~~~~~~t~~GRrmFP~l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry~~~~----------------------------- 54 (103)
.+|||+| |+||||||.++++|+||||++.|.|+||++++|++||||++++
T Consensus 23 ~tEMIiT-k~GRrmFP~l~~~vsGLdp~~~Y~v~l~~~~~D~~rykf~~~~W~~~gkae~~~p~r~y~Hpdsp~tG~~WM 101 (203)
T 2x6u_A 23 GTEMIIT-KAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWM 101 (203)
T ss_dssp CCEEECB-SSCEECSSCCEEEEESCCSSSEEEEEEEEEEEEEEEEEEETTEEEEEEECCCC---CCEECTTCSEEHHHHH
T ss_pred CceEEEe-cCCcccCceeEEEEeCCCcccCeEEEEEEEEccCceeEEeCCcEeECcccCCCCCcceEECCCCccchHHHh
Confidence 4788887 7999999999999999999999999999999999999998754
Q ss_pred -ceeEeec----------------------CCeeEEEEcCCCCCCCCCCCCeEEEEcCCceEEEcCCCCCCC
Q psy9084 55 -QIGSLVS----------------------LPRFHVVLLSPESNSASATSPFKTFLFPETMFTAVTAYQNHR 103 (103)
Q Consensus 55 -~~vsF~k----------------------qPrlhiv~~~~~~~~~~~~~~~~tf~FpeT~FiAVTAYQN~~ 103 (103)
++|||+| ||||||+++++..........+++|+||||+|||||||||++
T Consensus 102 ~~~VsF~klKLTNn~~d~~g~I~L~SmHKYqPrlhIv~~~~~~~~~~~~~~~~tf~FpeT~FiAVTaYQN~~ 173 (203)
T 2x6u_A 102 RQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHK 173 (203)
T ss_dssp HSCEECTTCEEECCTTCSSCCEECCTTEEEEEEEEEEECCTTSCSSSSCCCEEEECCGGGCEEEESSCCSHH
T ss_pred hCCceeeeeeceeccCCccceEeecCCceEEEEEEEEEeCCccccCcCccceEEEEcCCcEEEEEeeecchh
Confidence 7899998 899999999876544344578899999999999999999973
No 2
>4a04_A T-box transcription factor TBX1; transcription, T-box proteins; HET: DNA; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=238.87 Aligned_cols=99 Identities=63% Similarity=0.973 Sum_probs=84.1
Q ss_pred CceeeecccCCcCCCccceEEEeCCCCCCCeeEEEEEEEccCCceeeee--cc---------------------------
Q psy9084 4 DEALCGWPWISRRMFPTFQVRLFNLDPDAEYMLMMDFVPVDDKRYRYAF--HR--------------------------- 54 (103)
Q Consensus 4 ~~~~~~~t~~GRrmFP~l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry~~--~~--------------------------- 54 (103)
.+|||+| |+||||||.|+++|+||||+++|.|+||++++|++||||.. ++
T Consensus 33 ~tEMIIT-K~GRrmFP~l~~~vsGLdp~~~Y~~~l~~~~~D~~ryry~~~~~~W~~~gkae~~~p~r~~~Hpdsp~tG~~ 111 (203)
T 4a04_A 33 GTEMIVT-KAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQ 111 (203)
T ss_dssp CCEEECC-SSCEECSSCEEEEEESCCTTSEEEEEEEEEESCSEEEEEETTTTEEEEEEECCCCCCCCCCBCTTCSEEHHH
T ss_pred CCeEEEE-eCCcccCCceEEEEeCCCcccCcEEEEEEEEccCCeEEecccCCCEeECCccCCCCCCceEEcCCCCcCHHH
Confidence 4789988 79999999999999999999999999999999999999963 21
Q ss_pred ---ceeEeec----------------------CCeeEEEEcCCCCCC-CCCCCCeEEEEcCCceEEEcCCCCCCC
Q psy9084 55 ---QIGSLVS----------------------LPRFHVVLLSPESNS-ASATSPFKTFLFPETMFTAVTAYQNHR 103 (103)
Q Consensus 55 ---~~vsF~k----------------------qPrlhiv~~~~~~~~-~~~~~~~~tf~FpeT~FiAVTAYQN~~ 103 (103)
++|||+| ||||||+++++.... ......+++|+||||+|||||||||++
T Consensus 112 WM~~~VsF~klKLTNn~~d~~g~I~L~SmHKYqPrlhIv~~~~~~~~~~~~~~~~~tf~FpeT~FiAVTaYQN~~ 186 (203)
T 4a04_A 112 WMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHR 186 (203)
T ss_dssp HHHSCEEECSCEEECCTTCCSSCEECCTTCEEEEEEEEEECCCC--------CCEEEEECGGGCEEEESSCCCHH
T ss_pred HhhCcceeeeeecccCccCcCCEEEEeeccccccEEEEEEcCCCcccccccCCceEEEECCCcEEEeeCccCCHH
Confidence 7899998 899999999865432 234578999999999999999999974
No 3
>1xbr_A Protein (T protein); complex (transcription factor/DNA), transcription factor, DNA-binding protein, transcription/DNA complex; HET: DNA; 2.50A {Xenopus laevis} SCOP: b.2.5.4
Probab=100.00 E-value=5.4e-39 Score=234.96 Aligned_cols=93 Identities=37% Similarity=0.597 Sum_probs=84.2
Q ss_pred CceeeecccCCcCCCccceEEEeCCCCCCCeeEEEEEEEccCCceeeeecc-----------------------------
Q psy9084 4 DEALCGWPWISRRMFPTFQVRLFNLDPDAEYMLMMDFVPVDDKRYRYAFHR----------------------------- 54 (103)
Q Consensus 4 ~~~~~~~t~~GRrmFP~l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry~~~~----------------------------- 54 (103)
.+|||+| |+||||||.++++|+||||++.|.|+||++++|++||||++++
T Consensus 19 ~tEMIiT-k~GRrmFP~l~~~v~GLdp~~~Y~v~l~~~~~D~~ryk~~~~~W~~~gkae~~~p~r~~~Hpdsp~~G~~WM 97 (184)
T 1xbr_A 19 TNEMIVT-KNGRRMFPVLKVSMSGLDPNAMYTVLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWM 97 (184)
T ss_dssp CCEEECB-TTCEECSSCCEEEEECSCTTSEEEEEEEEEESSSCEEEEETTEEEEESSCCCCCCCCCEECTTCSEEHHHHH
T ss_pred CcEEEEe-cCCcccCCccEEEEeCCCcccCeEEEEEEEEccCceEEEECCcEEEcCccCCCCCcceEECCCCchhHHHHh
Confidence 4688887 7899999999999999999999999999999999999998753
Q ss_pred -ceeEeec---------------------CCeeEEEEcCCCCCCCCCCCCeEEEEcCCceEEEcCCCCCCC
Q psy9084 55 -QIGSLVS---------------------LPRFHVVLLSPESNSASATSPFKTFLFPETMFTAVTAYQNHR 103 (103)
Q Consensus 55 -~~vsF~k---------------------qPrlhiv~~~~~~~~~~~~~~~~tf~FpeT~FiAVTAYQN~~ 103 (103)
++|||+| ||||||+++++. ...+++|+||||+|||||||||++
T Consensus 98 ~~~VsF~klKlTNn~~~~~~i~L~SmHKY~PrlhI~~~~~~------~~~~~tf~FpeT~FiAVTaYQN~~ 162 (184)
T 1xbr_A 98 KDPVSFSKVKLTNKMNGGGQIMLNSLHKYEPRIHIVRVGGT------QRMITSHSFPETQFIAVTAYQNEE 162 (184)
T ss_dssp HSCEECTTCEEESSCCTTTCEECCSSSEEEEEEEEEEESSS------SCCEEEEECGGGCEEEESSCCCHH
T ss_pred hCCceeccccccccCCCCCeEEeccCceEEEEEEEEEeCCC------cceEEEEECCCcEEEEEeccCChh
Confidence 7899998 899999998653 256899999999999999999963
No 4
>1h6f_A T-box transcription factor TBX3; transcription factor, TBX3, T-box transcription factor; 1.7A {Homo sapiens} SCOP: b.2.5.4
Probab=100.00 E-value=4.2e-39 Score=236.98 Aligned_cols=97 Identities=42% Similarity=0.688 Sum_probs=85.6
Q ss_pred CceeeecccCCcCCCccceEEEeCCCCCCCeeEEEEEEEccCCceeeeecc-----------------------------
Q psy9084 4 DEALCGWPWISRRMFPTFQVRLFNLDPDAEYMLMMDFVPVDDKRYRYAFHR----------------------------- 54 (103)
Q Consensus 4 ~~~~~~~t~~GRrmFP~l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry~~~~----------------------------- 54 (103)
.+|||+| |+||||||.++++|+||||++.|.|+||++++|++||||++++
T Consensus 22 ~tEMIiT-k~GRrmFP~l~~~v~GLdp~~~Y~v~l~~~~~d~~rykf~~~~W~~~gkae~~~p~r~~~Hpdsp~tG~~WM 100 (193)
T 1h6f_A 22 GTEMVIT-KSGRRMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWM 100 (193)
T ss_dssp CCEEECC-TTCBCCSSCCEEEEESCCSSSEEEEEEEEEEEEEEEEEEETTEEEEEEECCCCCCCCCEECTTCSEEHHHHT
T ss_pred cceEEEe-cCCcccCceeEEEEeCCCcccceEEEEEEEEccCceeeccCCcEEECcccCCCCCcceEecCCCcccHHHHh
Confidence 4688877 5999999999999999999999999999999999999998753
Q ss_pred -ceeEeec----------------------CCeeEEEEcCCCCCCCCCCCCeEEEEcCCceEEEcCCCCCCC
Q psy9084 55 -QIGSLVS----------------------LPRFHVVLLSPESNSASATSPFKTFLFPETMFTAVTAYQNHR 103 (103)
Q Consensus 55 -~~vsF~k----------------------qPrlhiv~~~~~~~~~~~~~~~~tf~FpeT~FiAVTAYQN~~ 103 (103)
++|||+| ||||||+++++... .+.+.+++|+||||+|||||||||++
T Consensus 101 ~~~VsF~klKLTNn~~~~~~~i~L~SmHKY~PrlhI~~~~~~~~--~~~~~~~tf~FpeT~FiAVTaYQN~~ 170 (193)
T 1h6f_A 101 SKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILK--LPYSTFRTYLFPETEFIAVTAYQNDK 170 (193)
T ss_dssp TSCEECTTCCEECCTTCCSCCEECCTTEEEEEEEEEECCSCGGG--GGGSCCEEEECGGGCEEEESSCSCHH
T ss_pred hCCcceeeeeeeccCCCCCCcEEecCCceEeeEEEEEEcCCccC--CCCcceEEEECCCeEEEEEeccCchh
Confidence 7899998 89999999865322 23467899999999999999999963
No 5
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=72.94 E-value=4.7 Score=30.39 Aligned_cols=44 Identities=11% Similarity=0.073 Sum_probs=32.6
Q ss_pred eeecccCCcCCCc-cceEEEeCCCCCCCeeEEEEEEEccCCceee
Q psy9084 7 LCGWPWISRRMFP-TFQVRLFNLDPDAEYMLMMDFVPVDDKRYRY 50 (103)
Q Consensus 7 ~~~~t~~GRrmFP-~l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry 50 (103)
-|.++..++.+.- .++++|+||.|.+.+.+...+.--+...|+-
T Consensus 5 ~~~~~~~~~~~~d~~~~i~~~gl~~~~~~~~~~~~~~~~~~~~~s 49 (422)
T 3k2i_A 5 TLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRA 49 (422)
T ss_dssp EEEEEC---CBTTSCCEEEEESCCTTCEEEEEEEEECTTSCEEEE
T ss_pred eEEEecCccccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCEEEE
Confidence 3556667777655 4899999999999999999988766667754
No 6
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.48 E-value=6.6 Score=23.78 Aligned_cols=21 Identities=24% Similarity=0.415 Sum_probs=18.8
Q ss_pred eEEEeCCCCCCCeeEEEEEEE
Q psy9084 22 QVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 22 ~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
++.|.||.|...|.+.|..+-
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A~~ 82 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQSLR 82 (104)
T ss_dssp EEEEESCCTTCCEEEEEEEEC
T ss_pred EEEECCCCCCCEEEEEEEEEC
Confidence 899999999999999888763
No 7
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=65.66 E-value=7.8 Score=23.37 Aligned_cols=27 Identities=15% Similarity=0.231 Sum_probs=22.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEccCC
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPVDDK 46 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~d~~ 46 (103)
.-++.|.||.|...|.+.|.-...+..
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~~~~~ 85 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWGEDSA 85 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEEECTT
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcc
Confidence 358999999999999999888775543
No 8
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=64.51 E-value=7.5 Score=29.75 Aligned_cols=43 Identities=9% Similarity=0.069 Sum_probs=34.6
Q ss_pred eecccCCcCCCc-cceEEEeCCCCCCCeeEEEEEEEccCCceee
Q psy9084 8 CGWPWISRRMFP-TFQVRLFNLDPDAEYMLMMDFVPVDDKRYRY 50 (103)
Q Consensus 8 ~~~t~~GRrmFP-~l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry 50 (103)
|.+++.++.++- .++++|+||.|.+.+.+...+.--....|+-
T Consensus 22 ~~~~~~~~~~~de~~~i~~~gl~p~~~~~~~~~~~~~~~~~~~s 65 (446)
T 3hlk_A 22 LILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQA 65 (446)
T ss_dssp EEEESCSCEETTSCCEEEEESCCTTCEEEEEEEEECTTCCEEEE
T ss_pred EEEecccccCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCEEEE
Confidence 566777777744 5899999999999999999888766667764
No 9
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=64.42 E-value=12 Score=26.10 Aligned_cols=42 Identities=17% Similarity=0.184 Sum_probs=31.4
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEccCCceeeeeccceeEeecC
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVDDKRYRYAFHRQIGSLVSL 62 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry~~~~~~vsF~kq 62 (103)
-.+.+.||+|...|.+-|...+.......|..-++++.|.-+
T Consensus 165 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~ 206 (214)
T 2b5i_B 165 EWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTK 206 (214)
T ss_dssp CEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECC
T ss_pred eEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcC
Confidence 478899999999999999999864434445555567777653
No 10
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=64.38 E-value=6.7 Score=23.38 Aligned_cols=23 Identities=13% Similarity=0.193 Sum_probs=19.7
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
-++.|.||.|...|.+.|.....
T Consensus 58 t~~~l~~L~p~t~Y~v~V~A~~~ 80 (97)
T 3qht_C 58 STATISGLSPGVDYTITVYAYYS 80 (97)
T ss_dssp CEEEECSCCTTCEEEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEeC
Confidence 57899999999999998877653
No 11
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=63.77 E-value=6.8 Score=23.78 Aligned_cols=22 Identities=32% Similarity=0.308 Sum_probs=19.4
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
-++.+.||.|...|.+.|...-
T Consensus 56 ~~~~l~~L~p~t~Y~~~V~A~~ 77 (104)
T 2rb8_A 56 NQYSIGNLKPDTEYEVSLISRR 77 (104)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 5789999999999999888765
No 12
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=63.64 E-value=8.3 Score=23.40 Aligned_cols=22 Identities=14% Similarity=0.235 Sum_probs=18.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
.-++.|.||.|...|.+.|...
T Consensus 63 ~ts~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 63 YSTATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp CCEEEECSCCTTCCEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 3578999999999999888765
No 13
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=63.13 E-value=7.2 Score=23.52 Aligned_cols=23 Identities=26% Similarity=0.277 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.-++.|+||.|...|.+.|...-
T Consensus 54 ~t~~~l~gL~P~t~Y~~~V~A~~ 76 (98)
T 3tes_A 54 ERSYDLTGLKPGTEYTVSIYGVK 76 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEe
Confidence 35799999999999998887665
No 14
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=62.60 E-value=5.4 Score=23.43 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|....
T Consensus 54 ~~~~~l~~L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 54 EDTAELQGLRPGSEYTVSVVALH 76 (94)
T ss_dssp CCEEEECSCCCCSEEEEEEEECS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEc
Confidence 56899999999999998887654
No 15
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.48 E-value=11 Score=22.71 Aligned_cols=22 Identities=18% Similarity=0.232 Sum_probs=19.2
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..+.|.||.|...|.+.|...-
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n 85 (109)
T 2e7h_A 64 NRAELRGLKRGASYLVQVRARS 85 (109)
T ss_dssp SEEEEESCCTTSCEEEEEEEEC
T ss_pred CEEEECCCCCCCeEEEEEEEEe
Confidence 4889999999999999887764
No 16
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=61.33 E-value=8.3 Score=22.74 Aligned_cols=23 Identities=22% Similarity=0.387 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|....
T Consensus 54 ~~~~~i~~L~p~t~Y~~~V~A~n 76 (98)
T 3teu_A 54 STSVTITGLTPGVEYVVSVYALK 76 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEecCCCCCCEEEEEEEEEe
Confidence 46899999999999999887665
No 17
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=61.11 E-value=9.3 Score=22.55 Aligned_cols=22 Identities=9% Similarity=0.170 Sum_probs=19.0
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.++.|.||.|...|.+.|...-
T Consensus 62 ~~~~i~~L~p~t~Y~~~V~A~n 83 (107)
T 2dn7_A 62 QHFTVTGLHKGTTYIFRLAAKN 83 (107)
T ss_dssp CEEEEECCCTTCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCEEEEEEEEEc
Confidence 4889999999999998887664
No 18
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=61.08 E-value=9.4 Score=22.72 Aligned_cols=24 Identities=25% Similarity=0.313 Sum_probs=20.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
...+.|.||.|...|.+.|...-.
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n~ 85 (108)
T 2djs_A 62 TNTARIDGLRPGMVYVVQVRARTV 85 (108)
T ss_dssp SSEEEEESCCTTCEEEEEEEEEES
T ss_pred ccEEEEcCCCCCCEEEEEEEEEeC
Confidence 367899999999999998877653
No 19
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=60.74 E-value=8.4 Score=23.10 Aligned_cols=23 Identities=22% Similarity=0.333 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 54 ~t~~~i~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 54 ITSLTLTNLEPNTTYEIRIVARN 76 (100)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEE
T ss_pred ceEEEECCCCCCCEEEEEEEEEe
Confidence 46899999999999999887765
No 20
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.64 E-value=7.2 Score=24.59 Aligned_cols=23 Identities=13% Similarity=0.245 Sum_probs=19.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|...|.+.|...-
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n 99 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTK 99 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECC
T ss_pred ceEEEecCCCCCCEEEEEEEEeC
Confidence 46789999999999999886543
No 21
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=60.49 E-value=8.5 Score=23.38 Aligned_cols=23 Identities=17% Similarity=0.182 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 58 ~ts~~l~~L~p~t~Y~~~V~A~~ 80 (105)
T 2cum_A 58 ITSHQLLGLFPSTSYNARLQAMW 80 (105)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEB
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 35899999999999999887764
No 22
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=59.86 E-value=6.2 Score=24.14 Aligned_cols=24 Identities=8% Similarity=0.047 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
..++.|.||.|...|.+.|.....
T Consensus 66 ~~~~~l~~L~p~t~Y~~~VRa~~~ 89 (109)
T 1uc6_A 66 GTAHTITDAYAGKEYIIQVAAKDN 89 (109)
T ss_dssp CSEEEETTCCSSSCEEEEEECCBS
T ss_pred CCEEEEeCCCCCCEEEEEEEEEeC
Confidence 357899999999999998887653
No 23
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=59.58 E-value=8.4 Score=23.61 Aligned_cols=22 Identities=14% Similarity=0.126 Sum_probs=19.5
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
-++.|.||.|...|.+.|....
T Consensus 59 t~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 59 VDYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp SEEEECSCCSSSEEEEEEEEEE
T ss_pred cEEEEeCCCCCCEEEEEEEEEe
Confidence 5789999999999999888765
No 24
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=59.46 E-value=12 Score=22.49 Aligned_cols=24 Identities=21% Similarity=0.095 Sum_probs=20.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
...+.|.||.|...|.+.|...-.
T Consensus 77 ~~~~~i~~L~p~t~Y~~~V~A~n~ 100 (122)
T 1va9_A 77 SEVYTLDNLKKFAQYGVVVQAFNR 100 (122)
T ss_dssp EEEEEEESCCSSCCEEEEEEEEET
T ss_pred eeEEEeCCCCCCCEEEEEEEEEcC
Confidence 378999999999999998887653
No 25
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=59.05 E-value=8.9 Score=24.21 Aligned_cols=22 Identities=18% Similarity=0.134 Sum_probs=19.4
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
-++.|.||.|...|.+.|.-+.
T Consensus 70 t~~~l~gL~PgT~Y~~~V~A~~ 91 (112)
T 2cui_A 70 HSAVLRDLRSGTLYSLTLYGLR 91 (112)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCEEEEEEEEEE
Confidence 3799999999999999888764
No 26
>3fpu_B C-C motif chemokine 3; protein:protein complex, glycoprotein, secreted, chemotaxis, cytokine, inflammatory response, polymorphism, immune system; 1.76A {Homo sapiens} SCOP: d.9.1.1 PDB: 2x69_A 3h44_C 3kbx_A 2x6g_A 1b50_A 1b53_A 3tn1_A
Probab=57.63 E-value=2.6 Score=25.14 Aligned_cols=15 Identities=13% Similarity=0.000 Sum_probs=12.7
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+||.||.+
T Consensus 36 ~~~aVIf~tk~g~~v 50 (70)
T 3fpu_B 36 SKPGVIFLTKRSRQV 50 (70)
T ss_dssp SSCCEEEEETTSCEE
T ss_pred CCceEEEEecCCCEE
Confidence 568999999999953
No 27
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=56.87 E-value=7.8 Score=24.06 Aligned_cols=23 Identities=17% Similarity=0.262 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|+..|.+.|....
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~ 89 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTK 89 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEEC
T ss_pred cCEEEeCCCCCCcEEEEEEEEec
Confidence 45899999999999999887664
No 28
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=56.81 E-value=12 Score=22.73 Aligned_cols=22 Identities=18% Similarity=0.413 Sum_probs=19.2
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.++.|.||.|...|.+.|...-
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFN 90 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred eEEEcCCCCCCCEEEEEEEEEc
Confidence 5799999999999999887664
No 29
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.41 E-value=11 Score=22.24 Aligned_cols=23 Identities=22% Similarity=0.129 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~A~n 82 (106)
T 2ed8_A 60 GLSYKLEGLKKFTEYSLRFLAYN 82 (106)
T ss_dssp SSCEEEESCCTTCEEEEEEEEEC
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 46889999999999998887654
No 30
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=56.04 E-value=12 Score=22.61 Aligned_cols=23 Identities=26% Similarity=0.275 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 79 ~~~~~i~~L~p~t~Y~~~V~A~n 101 (125)
T 1uen_A 79 KTHGMLPGLEPFSHYTLNVRVVN 101 (125)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEec
Confidence 46889999999999999888765
No 31
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=55.96 E-value=11 Score=22.53 Aligned_cols=24 Identities=17% Similarity=0.286 Sum_probs=20.2
Q ss_pred ccceEEEeCCCCCCCeeEEEEEEE
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
....+.|.||.|...|.+.|...-
T Consensus 64 ~~~~~~i~~L~p~t~Y~~rV~A~n 87 (105)
T 2haz_A 64 MEGIVTIVGLKPETTYAVRLAALN 87 (105)
T ss_dssp HHSEEEECSCCTTCEEEEEEEEEE
T ss_pred CccEEEECCCCCCCEEEEEEEEEc
Confidence 346889999999999999887664
No 32
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.95 E-value=13 Score=21.68 Aligned_cols=23 Identities=26% Similarity=0.233 Sum_probs=19.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|...-
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~A~n 82 (106)
T 2dju_A 60 TTRYSIGGLSPFSEYAFRVLAVN 82 (106)
T ss_dssp SSEEEEESCCTTCEEEEEEEEEC
T ss_pred ccEEEEeCCCCCcEEEEEEEEEe
Confidence 46789999999999998886553
No 33
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.89 E-value=13 Score=22.41 Aligned_cols=23 Identities=17% Similarity=0.238 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|...|.+.|...-
T Consensus 72 ~~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 72 QTSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEc
Confidence 46889999999999998887765
No 34
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=55.64 E-value=11 Score=23.82 Aligned_cols=23 Identities=17% Similarity=0.320 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 81 ~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 81 KSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp CCEEEECCCCTTCEEEEEEEEEC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 36899999999999999887653
No 35
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=55.33 E-value=11 Score=23.53 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=20.3
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
-++.|.||.|...|.+.|......
T Consensus 57 ts~~l~gL~P~T~Y~v~V~A~~~~ 80 (114)
T 3qwq_B 57 HTATISGLKPGVDYTITVYAVTDH 80 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEECC
Confidence 578999999999999988776643
No 36
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.21 E-value=13 Score=22.92 Aligned_cols=22 Identities=9% Similarity=0.200 Sum_probs=19.1
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.++.|.||.|...|.+.|...-
T Consensus 71 ~~~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 71 RYYSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp CEEEECSCCSSSBEEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEe
Confidence 5789999999999999887664
No 37
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=55.14 E-value=8.6 Score=23.97 Aligned_cols=21 Identities=14% Similarity=0.039 Sum_probs=19.1
Q ss_pred ceEEEeCCCCCCCeeEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
-.+.|.||.|...|.+.|..+
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~ 79 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPV 79 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEEE
Confidence 578999999999999999887
No 38
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=54.98 E-value=8.4 Score=23.95 Aligned_cols=22 Identities=18% Similarity=0.317 Sum_probs=19.3
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
-++.+.||.|...|.+.|--+.
T Consensus 59 ~s~~l~~L~PgT~Y~V~v~a~~ 80 (95)
T 2h41_A 59 TSVNIPDLLPGRKYIVNVYQIS 80 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEc
Confidence 6788999999999999987655
No 39
>3tn2_A C-C motif chemokine 4; cytokine; 1.60A {Homo sapiens} PDB: 1hum_A 1hun_A 2x6l_A 3kkh_A 1je4_A 2ffk_B 2fin_B
Probab=54.73 E-value=3.1 Score=24.92 Aligned_cols=15 Identities=13% Similarity=-0.013 Sum_probs=13.0
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+.+|+|.+||.||.+
T Consensus 36 ~~~aVIf~tk~gr~i 50 (68)
T 3tn2_A 36 SQPAVVFQTKRSKQV 50 (68)
T ss_dssp SSCCEEEEETTSCEE
T ss_pred CCCeEEEEECCCCEE
Confidence 578999999999973
No 40
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=54.10 E-value=13 Score=22.29 Aligned_cols=23 Identities=13% Similarity=0.101 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|...-
T Consensus 70 ~~~~~i~~L~p~t~Y~~~V~A~n 92 (116)
T 1x5g_A 70 SHSYTINGLKKYTEYSFRVVAYN 92 (116)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEC
T ss_pred CceEEEcCCCCCCEEEEEEEEEc
Confidence 46889999999999998887664
No 41
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=54.08 E-value=13 Score=22.45 Aligned_cols=23 Identities=26% Similarity=0.333 Sum_probs=19.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|...|.+.|...-
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n 96 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQN 96 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEC
Confidence 57899999999999998887654
No 42
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=53.89 E-value=12 Score=22.33 Aligned_cols=24 Identities=25% Similarity=0.404 Sum_probs=20.2
Q ss_pred ccceEEEeCCCCCCCeeEEEEEEE
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
+...+.+.||.|...|.+.|...-
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~n 91 (115)
T 1x5z_A 68 PGTSYRLQGLKPNSLYYFRLAARS 91 (115)
T ss_dssp SSSEEEEECCCTTCEEEECEEEEC
T ss_pred CCcEEEECCCCCCCeEEEEEEEEC
Confidence 357899999999999998887654
No 43
>1rjt_A Small inducible cytokine B11; chemokine; NMR {Synthetic} SCOP: d.9.1.1
Probab=53.74 E-value=5.6 Score=23.82 Aligned_cols=15 Identities=0% Similarity=-0.438 Sum_probs=12.7
Q ss_pred CCceeeeccc-CCcCC
Q psy9084 3 PDEALCGWPW-ISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~-~GRrm 17 (103)
+.+|+|.+|| +||..
T Consensus 37 ~~~~VIf~tk~~g~~v 52 (73)
T 1rjt_A 37 DKIEVIITLKENKGQR 52 (73)
T ss_dssp SSCBCCBCCSSSCCCC
T ss_pred CCCEEEEEECcCCCeE
Confidence 5689999999 99864
No 44
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=53.68 E-value=14 Score=21.95 Aligned_cols=23 Identities=13% Similarity=0.124 Sum_probs=19.1
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|...|.+.|...-
T Consensus 63 ~~~~~v~~L~p~t~Y~frV~A~n 85 (109)
T 1x5x_A 63 DLAYTVKNLRRSTKYKFKVIAYN 85 (109)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEC
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 46789999999999998876653
No 45
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.98 E-value=13 Score=22.48 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 2ee2_A 73 EYSARLENLLPDTQYFIEVGACN 95 (119)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEC
T ss_pred EeEEEECCCCCCCEEEEEEEEEc
Confidence 35899999999999998887764
No 46
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=52.60 E-value=15 Score=22.11 Aligned_cols=23 Identities=17% Similarity=0.281 Sum_probs=19.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 73 TLEYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEc
Confidence 46889999999999998887654
No 47
>1f9q_A Platelet factor 4; blood clotting; 2.00A {Homo sapiens} SCOP: d.9.1.1 PDB: 1rhp_A 1f9s_A 1f9r_A 1pfm_A 1pfn_A 1plf_A
Probab=52.60 E-value=4.5 Score=24.12 Aligned_cols=14 Identities=21% Similarity=0.157 Sum_probs=12.1
Q ss_pred CCceeeecccCCcC
Q psy9084 3 PDEALCGWPWISRR 16 (103)
Q Consensus 3 ~~~~~~~~t~~GRr 16 (103)
+..|+|.+||+||.
T Consensus 37 ~~~~VIf~tk~g~~ 50 (70)
T 1f9q_A 37 PTAQLIATLKNGRK 50 (70)
T ss_dssp SSCEEEEEETTSCE
T ss_pred CCCEEEEEEcCCCE
Confidence 46899999999985
No 48
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=52.51 E-value=15 Score=23.92 Aligned_cols=23 Identities=13% Similarity=0.065 Sum_probs=18.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..+|.|+||.|...|...+.-..
T Consensus 60 ~nSYtI~GL~P~~~YE~qv~S~~ 82 (98)
T 1oww_A 60 LNSYTIKGLKPGVVYEGQLISIQ 82 (98)
T ss_dssp CCEEEECSCCSSEEEEEEEEEEE
T ss_pred cceEEEecCCCCcEEEEEEEEee
Confidence 47899999999999997665443
No 49
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=51.79 E-value=17 Score=21.70 Aligned_cols=23 Identities=13% Similarity=0.283 Sum_probs=19.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 60 ~~~~~v~~L~p~t~Y~frV~A~n 82 (106)
T 1x4x_A 60 GLSYEIKGLSPATTYYCRVQALS 82 (106)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEC
T ss_pred cceEEEcCCCCCCEEEEEEEEEc
Confidence 35789999999999998887654
No 50
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.90 E-value=17 Score=22.70 Aligned_cols=25 Identities=8% Similarity=0.268 Sum_probs=20.3
Q ss_pred ccceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
+..++.|.||.|...|.+.|..+-.
T Consensus 78 ~~~~~~v~gL~p~t~Y~frV~A~N~ 102 (127)
T 2dmk_A 78 KQNHYTVHGLQSGTRYIFIVKAINQ 102 (127)
T ss_dssp CSSEEEEESCCSSCEEEEEEEEEES
T ss_pred cCCeEEECCCCCCCEEEEEEEEEeC
Confidence 3568899999999999988766653
No 51
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=50.75 E-value=15 Score=22.29 Aligned_cols=21 Identities=29% Similarity=0.494 Sum_probs=18.4
Q ss_pred EEEeCCCCCCCeeEEEEEEEc
Q psy9084 23 VRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 23 ~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
+.|.||.|...|.+.|...-.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~ 84 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTP 84 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECS
T ss_pred EEECCCCCCCEEEEEEEEECC
Confidence 899999999999998887654
No 52
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=50.70 E-value=16 Score=22.34 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.+.||.|...|.+.|...-
T Consensus 84 ~~~~~i~~L~p~t~Y~~~V~A~n 106 (130)
T 1wfo_A 84 ARQYTATGLKPESVYLFRITAQT 106 (130)
T ss_dssp CCEEEEESCCSSSEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEe
Confidence 46899999999999998887664
No 53
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=50.44 E-value=16 Score=22.10 Aligned_cols=23 Identities=17% Similarity=0.229 Sum_probs=19.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.-++.|.||+|...|.+.|...-
T Consensus 64 ~~~~~l~~L~p~t~Y~v~V~A~n 86 (102)
T 3n1f_C 64 KQWHMIGHLQPETSYDIKMQCFN 86 (102)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred ceEEECCCCCCCCEEEEEEEEEC
Confidence 34789999999999999887654
No 54
>1zxt_A ORF K6, VMIP-I, functional macrophage inflammatory protein 1-ALPH; chemokine fold, greek KEY motif, signaling protein; 1.70A {Human herpesvirus 8}
Probab=50.43 E-value=4 Score=24.94 Aligned_cols=15 Identities=13% Similarity=0.158 Sum_probs=12.6
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+||.||+.
T Consensus 36 ~~~aVIf~tk~g~~v 50 (76)
T 1zxt_A 36 PKPGVILLTKRGRQI 50 (76)
T ss_dssp SSCCEEEEETTCCEE
T ss_pred CCccEEEEEeCCCEE
Confidence 568999999999863
No 55
>1tvx_A NAP-2, neutrophil activating peptide 2 variant; cytokine; 1.75A {Homo sapiens} SCOP: d.9.1.1 PDB: 1nap_A
Probab=50.34 E-value=5 Score=24.25 Aligned_cols=15 Identities=7% Similarity=-0.075 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+.+|+|.+||+||..
T Consensus 37 ~~~~VIf~tk~g~~v 51 (75)
T 1tvx_A 37 NQVEVIATLKDGRKI 51 (75)
T ss_dssp CSCEEEEEETTSCEE
T ss_pred CCCEEEEEecCCCeE
Confidence 468999999999853
No 56
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.24 E-value=16 Score=21.79 Aligned_cols=23 Identities=13% Similarity=0.309 Sum_probs=19.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 68 ~~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 2ede_A 68 RLTHQIMDLNLDTMYYFRIQARN 90 (114)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEe
Confidence 35789999999999998887664
No 57
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=49.95 E-value=16 Score=21.71 Aligned_cols=22 Identities=18% Similarity=0.093 Sum_probs=19.1
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..+.+.||.|...|.+.|...-
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2dm4_A 63 NFTEIKNLLVNTLYTVRVAAVT 84 (108)
T ss_dssp SEEEECSCCSSCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCEEEEEEEEEC
Confidence 4789999999999999887765
No 58
>1mgs_A Human melanoma growth stimulatory activity; chemokine(growth factor); NMR {Homo sapiens} SCOP: d.9.1.1 PDB: 1msg_A 1msh_A 1qnk_A
Probab=49.83 E-value=5.3 Score=23.92 Aligned_cols=14 Identities=7% Similarity=-0.045 Sum_probs=12.1
Q ss_pred CCceeeecccCCcC
Q psy9084 3 PDEALCGWPWISRR 16 (103)
Q Consensus 3 ~~~~~~~~t~~GRr 16 (103)
+.+|+|.+|+.||.
T Consensus 36 ~~~aVIf~tk~g~~ 49 (73)
T 1mgs_A 36 AQTEVIATLKNGRK 49 (73)
T ss_dssp SSCEEEEEETTSCE
T ss_pred CCCEEEEEcCCCCE
Confidence 46899999999985
No 59
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.78 E-value=7.2 Score=22.84 Aligned_cols=23 Identities=22% Similarity=0.312 Sum_probs=19.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|....
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n 85 (103)
T 2edy_A 63 DTRFTLTGLKPDTTYDIKVRAWT 85 (103)
T ss_dssp SSCCEECSCCTTCCEEEECCEEC
T ss_pred cceEEEcCCCCCCEEEEEEEEEC
Confidence 35788999999999998887654
No 60
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.77 E-value=15 Score=22.80 Aligned_cols=22 Identities=14% Similarity=0.108 Sum_probs=19.0
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.++.|.||.|...|.+.|...-
T Consensus 60 t~~~l~~L~p~T~Y~v~V~A~~ 81 (108)
T 2ee3_A 60 TSAMLGPLSSSTTYTVRVTCLY 81 (108)
T ss_dssp CEEEECSCCSSCEEEEEEEEEC
T ss_pred CEEEcCCCCCCCEEEEEEEEEe
Confidence 5789999999999999887663
No 61
>1g2s_A Eotaxin-3; beta-BETA-beta-alpha helix, cytokine; NMR {Homo sapiens} SCOP: d.9.1.1 PDB: 1g2t_A
Probab=49.66 E-value=4.2 Score=24.31 Aligned_cols=15 Identities=7% Similarity=-0.048 Sum_probs=12.6
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 35 ~~~aVIf~tk~g~~v 49 (71)
T 1g2s_A 35 SQRAVIFTTKRGKKV 49 (71)
T ss_dssp SSCCEEEEETTSCEE
T ss_pred CCcEEEEEEeCCCEE
Confidence 568999999999853
No 62
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.65 E-value=18 Score=22.03 Aligned_cols=24 Identities=17% Similarity=0.070 Sum_probs=20.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
..++.+.||.|...|.+.|...-.
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~ 101 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTD 101 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEET
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcC
Confidence 468999999999999998877653
No 63
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=49.38 E-value=13 Score=22.09 Aligned_cols=23 Identities=17% Similarity=0.317 Sum_probs=19.5
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|...-
T Consensus 65 ~~~~~i~~L~p~t~Y~~~V~A~n 87 (111)
T 1x5l_A 65 TTRATVSGLKPGTRYVFQVRART 87 (111)
T ss_dssp SSEEEECSCCTTCEEEECEEEEE
T ss_pred CCEEEEcCCCCCCEEEEEEEEEe
Confidence 46789999999999998887765
No 64
>1ha6_A Macrophage inflammatory protein 3 alpha; immune system, chemiokine, mouse, CCL20/MIP-3A, defensins; NMR {Mus musculus} SCOP: d.9.1.1
Probab=49.09 E-value=6.9 Score=23.13 Aligned_cols=15 Identities=7% Similarity=-0.154 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 33 ~~~aVIf~tk~g~~v 47 (70)
T 1ha6_A 33 DINAIIFHTKKRKSV 47 (70)
T ss_dssp SSCEEEEEESSSSSE
T ss_pred CCCEEEEEecCCCEE
Confidence 468999999999864
No 65
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=48.92 E-value=19 Score=21.60 Aligned_cols=23 Identities=22% Similarity=0.228 Sum_probs=19.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.+.||.|...|.+.|...-
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1wf5_A 75 ATSVTVKGLVPARSYQFRLCAVN 97 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred ccEEEECCcCCCCEEEEEEEEEc
Confidence 46789999999999998887654
No 66
>1el0_A I-309; NMR {Synthetic} SCOP: d.9.1.1
Probab=48.88 E-value=4.5 Score=24.31 Aligned_cols=15 Identities=13% Similarity=-0.097 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 36 ~~~aVIf~tk~g~~v 50 (74)
T 1el0_A 36 SNEGLIFKLKRGKEA 50 (74)
T ss_dssp SSCCEEEEESSSSEE
T ss_pred CCceEEEEecCCCEE
Confidence 468999999999863
No 67
>1b3a_A Protein (rantes); chemical protein synthesis, chemokine, HIV-1, anti-HIV protein; HET: AOP; 1.60A {Synthetic} SCOP: d.9.1.1 PDB: 1hrj_A 1rtn_A 1rto_A 1u4l_A* 1u4m_A* 2l9h_A 1u4p_A 1eqt_A 1u4r_A 2vxw_A
Probab=48.81 E-value=5.3 Score=23.47 Aligned_cols=14 Identities=14% Similarity=0.050 Sum_probs=12.1
Q ss_pred CCceeeecccCCcC
Q psy9084 3 PDEALCGWPWISRR 16 (103)
Q Consensus 3 ~~~~~~~~t~~GRr 16 (103)
+..|+|.+|++||.
T Consensus 34 ~~~aVIf~tk~g~~ 47 (67)
T 1b3a_A 34 SNPAVVFVTRKNRQ 47 (67)
T ss_dssp SSCCEEEEETTCCE
T ss_pred CCceEEEEEcCCCE
Confidence 46899999999985
No 68
>3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A*
Probab=48.80 E-value=15 Score=26.06 Aligned_cols=27 Identities=19% Similarity=0.304 Sum_probs=20.9
Q ss_pred ccceEEEeCCCCCCCeeEEEEEEEccC
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFVPVDD 45 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~~~d~ 45 (103)
....+.+..|.|+..|+|.+.+.+..+
T Consensus 158 ~~~~~vi~~L~P~T~YCv~V~~~~~~~ 184 (199)
T 3s9d_B 158 GNFTYIIDKLIPNTNYCVSVYLEHSDE 184 (199)
T ss_dssp SEEEEEECSCCSSCEEEEEEEEEC---
T ss_pred CcceEEEeccCCCCcEEEEEEEEeCCC
Confidence 335789999999999999999877555
No 69
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.74 E-value=20 Score=21.71 Aligned_cols=23 Identities=9% Similarity=0.002 Sum_probs=18.6
Q ss_pred ccceEEEeCCCCCCCeeEEEEEE
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
...++.|.||.|...|.+.|...
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2db8_A 63 KETMCTVDGLHFNSTYNARVKAF 85 (110)
T ss_dssp SCSCEEEECCCSSSCCEEEEEEE
T ss_pred CcCEEEECCCCCCCEEEEEEEEE
Confidence 34678999999999999887655
No 70
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=48.65 E-value=21 Score=24.21 Aligned_cols=25 Identities=24% Similarity=0.080 Sum_probs=21.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
.-.+.+.||+|...|++.+.....+
T Consensus 154 ~~~~~l~~L~p~t~Ycv~V~a~~~~ 178 (201)
T 3lqm_A 154 YDFEVLRNLEPWTTYCVQVRGFLPD 178 (201)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETT
T ss_pred CceEEEecCCCCCcEEEEEEEEecc
Confidence 3468899999999999999988754
No 71
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=48.32 E-value=24 Score=21.06 Aligned_cols=23 Identities=13% Similarity=0.050 Sum_probs=19.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.+.||.|...|.+.|...-
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEc
Confidence 56899999999999998877654
No 72
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=47.46 E-value=18 Score=22.33 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|...|.+.|...-
T Consensus 66 ~~~~~i~~L~p~t~Y~~rV~A~n 88 (122)
T 2e3v_A 66 EGIVTIVGLKPETTYAVRLAALN 88 (122)
T ss_dssp TTEEEECSCCTTCEEEEEEEEEE
T ss_pred cceEEeCCCCCCCEEEEEEEEEe
Confidence 46889999999999999888665
No 73
>1eig_A Eotaxin-2; chemokine, chemotactic cytokine, eosinophil chemoattractant; NMR {Homo sapiens} SCOP: d.9.1.1 PDB: 1eih_A
Probab=47.35 E-value=7 Score=23.40 Aligned_cols=15 Identities=0% Similarity=-0.281 Sum_probs=12.6
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 33 ~~~aVIf~tk~g~~v 47 (73)
T 1eig_A 33 LKAGVIFTTKKGQQS 47 (73)
T ss_dssp SSCCEEEEETTSCCE
T ss_pred CCcEEEEEEcCCCEE
Confidence 568999999999863
No 74
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=47.35 E-value=15 Score=22.48 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n 98 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALT 98 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEEc
Confidence 46899999999999999887765
No 75
>1cm9_A VMIP-II, protein (viral macrophage inflammatory protein-II; chemokine, karposi'S sarcoma; 2.10A {Human herpesvirus 8} SCOP: d.9.1.1 PDB: 1hhv_A* 1hfg_A 1hfn_A 1vmp_A 2fht_A 2fj2_A
Probab=47.08 E-value=5.9 Score=23.80 Aligned_cols=15 Identities=7% Similarity=-0.039 Sum_probs=12.6
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|++||..
T Consensus 39 ~~~aVIf~tk~g~~v 53 (74)
T 1cm9_A 39 SKPGVIFLTKRGRQV 53 (74)
T ss_dssp SSCCEEEEETTSCEE
T ss_pred CCcEEEEEEcCCCEE
Confidence 568999999999853
No 76
>2q8r_E CCL14; common CC chemokine fold, cytokine; 1.82A {Homo sapiens}
Probab=47.08 E-value=5.9 Score=23.17 Aligned_cols=15 Identities=0% Similarity=-0.146 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 33 ~~~aVIf~tk~g~~v 47 (66)
T 2q8r_E 33 SKPGIVFITKRGHSV 47 (66)
T ss_dssp SSCCEEEEETTSCEE
T ss_pred CCceEEEEEeCCCEE
Confidence 568999999999853
No 77
>1nr4_A CCL17, thymus and activation-regulated chemokine, CC chemokine; TARC, cytokine, chemotaxis; 1.72A {Synthetic} SCOP: d.9.1.1 PDB: 1nr2_A
Probab=47.03 E-value=5.9 Score=23.60 Aligned_cols=15 Identities=13% Similarity=0.065 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|++||..
T Consensus 35 ~~~aVIf~tk~g~~v 49 (71)
T 1nr4_A 35 SRDAIVFVTVQGRAI 49 (71)
T ss_dssp SSCCEEEEETTSCEE
T ss_pred CccEEEEEeCCCCEE
Confidence 568999999999853
No 78
>1icw_A Interleukin-8, IL-8; cytokine, chemokine; 2.01A {Homo sapiens} SCOP: d.9.1.1 PDB: 1ikl_A* 1ikm_A* 1il8_A 1ilp_A* 1ilq_A* 2il8_A 3il8_A 1qe6_A 1rod_A
Probab=46.98 E-value=7 Score=23.31 Aligned_cols=15 Identities=7% Similarity=-0.070 Sum_probs=12.4
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 35 ~~~aVIf~tk~g~~v 49 (72)
T 1icw_A 35 ANTCIIVKLSDGREL 49 (72)
T ss_dssp SSCEEEEEETTSCEE
T ss_pred CCcEEEEEecCCCEE
Confidence 468999999999853
No 79
>2r3z_A CXCL10, small-inducible cytokine B10; IP-10/CXCL10, chemokine, chemotaxis, inflammatory response, attractant; 2.50A {Mus musculus}
Probab=46.48 E-value=6.8 Score=23.10 Aligned_cols=15 Identities=7% Similarity=-0.084 Sum_probs=12.2
Q ss_pred CCceeeeccc-CCcCC
Q psy9084 3 PDEALCGWPW-ISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~-~GRrm 17 (103)
+++|+|.+|| +||..
T Consensus 37 ~~~~VIf~tk~~g~~v 52 (68)
T 2r3z_A 37 PRVEIIATMKKNDEQR 52 (68)
T ss_dssp SSCEEEEECTTTSCEE
T ss_pred CCCEEEEEEccCCCEE
Confidence 4689999999 99853
No 80
>1esr_A MCP-2, monocyte chemotactic protein 2; cytokine, chemokine, monocyte chemoattractant protein, HIV- 1, pyroglutamic acid, X-RAY crystallography; 2.00A {Homo sapiens} SCOP: d.9.1.1
Probab=46.43 E-value=5 Score=24.20 Aligned_cols=15 Identities=20% Similarity=0.140 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 37 ~~~aVIf~tk~g~~v 51 (76)
T 1esr_A 37 PKEAVIFKTQRGKEV 51 (76)
T ss_dssp SSCCEEEEETTCCEE
T ss_pred CCcEEEEEecCCCEE
Confidence 568999999999853
No 81
>1mi2_A Macrophage inflammatory protein-2; MIP-2, chemokine, cytokine; NMR {Mus musculus} SCOP: d.9.1.1 PDB: 3n52_A
Probab=46.26 E-value=5.6 Score=23.78 Aligned_cols=14 Identities=0% Similarity=-0.161 Sum_probs=12.0
Q ss_pred CCceeeecccCCcC
Q psy9084 3 PDEALCGWPWISRR 16 (103)
Q Consensus 3 ~~~~~~~~t~~GRr 16 (103)
+.+|+|.+|+.||.
T Consensus 36 ~~~aVIf~tk~g~~ 49 (73)
T 1mi2_A 36 AQTEVIATLKGGQK 49 (73)
T ss_dssp CSCEEEEEETTTEE
T ss_pred CCcEEEEEecCCCe
Confidence 46899999999985
No 82
>1eot_A Eotaxin; cytokine, chemokine, protein synthesis, solution structure, CCR3, eosinophil; NMR {Homo sapiens} SCOP: d.9.1.1 PDB: 2eot_A
Probab=45.96 E-value=5.5 Score=23.90 Aligned_cols=15 Identities=13% Similarity=0.213 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 35 ~~~aVIf~tk~g~~v 49 (74)
T 1eot_A 35 PQKAVIFKTKLAKDI 49 (74)
T ss_dssp SSCEEEEEETTSCEE
T ss_pred CCcEEEEEeCCCCEE
Confidence 568999999999853
No 83
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.75 E-value=6.9 Score=23.68 Aligned_cols=22 Identities=18% Similarity=0.366 Sum_probs=18.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
..++.|.||.|...|.+.|...
T Consensus 60 ~~~~~l~~L~p~t~Y~~~V~A~ 81 (105)
T 2ekj_A 60 RSHVTLPDLQAATKYRVLVSAI 81 (105)
T ss_dssp SSEEEECSCCSSCCCBCBBCBB
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 3689999999999999776544
No 84
>1m8a_A Small inducible cytokine A20; CC-chemokine, IL-8 type dimer; 1.70A {Synthetic} SCOP: d.9.1.1 PDB: 2jyo_A 2hci_A
Probab=45.69 E-value=6.6 Score=23.22 Aligned_cols=14 Identities=7% Similarity=-0.313 Sum_probs=12.0
Q ss_pred CCceeeecccCCcC
Q psy9084 3 PDEALCGWPWISRR 16 (103)
Q Consensus 3 ~~~~~~~~t~~GRr 16 (103)
+..|+|.+|+.||.
T Consensus 33 ~~~aVIf~tk~g~~ 46 (70)
T 1m8a_A 33 DINAIIFHTKKKLS 46 (70)
T ss_dssp SSCEEEEEETTCCE
T ss_pred CCcEEEEEecCCCE
Confidence 46899999999985
No 85
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.68 E-value=21 Score=21.24 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=19.8
Q ss_pred ccceEEEeCCCCCCCeeEEEEEEE
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
....+.+.||.|...|.+.|...-
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2yuw_A 63 DKTKFTITGLPTDAKIFVRVKAVN 86 (110)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccCEEEECCCCCCCEEEEEEEEEc
Confidence 456899999999999998876654
No 86
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=45.54 E-value=23 Score=21.48 Aligned_cols=23 Identities=13% Similarity=0.277 Sum_probs=18.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|...|.+.|...-
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEc
Confidence 36789999999999998886654
No 87
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=45.37 E-value=21 Score=21.28 Aligned_cols=23 Identities=22% Similarity=0.376 Sum_probs=18.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.+.||.|...|.+.|...-
T Consensus 71 ~~~~~i~~L~p~t~Y~frV~A~n 93 (117)
T 1uem_A 71 TTLYTVRGLRPNTIYLFMVRAIN 93 (117)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEC
Confidence 45789999999999998886654
No 88
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=45.13 E-value=23 Score=24.31 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=20.7
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
..+.|.||.|...|++.+......
T Consensus 160 ~~~~i~~L~p~t~Ycv~Vra~~~~ 183 (206)
T 4doh_B 160 IPVHLETMEPGAAYCVKAQTFVKA 183 (206)
T ss_dssp SEEEEEECCSSSCEEEEEEEEEGG
T ss_pred eEEEEeCCCCCCcEEEEEEEEecC
Confidence 578999999999999999987643
No 89
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=44.95 E-value=25 Score=21.24 Aligned_cols=24 Identities=21% Similarity=0.166 Sum_probs=19.9
Q ss_pred ccceEEEeCCCCCCCeeEEEEEEE
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
....+.+.||.|...|.+.|...-
T Consensus 73 ~~~~~~v~~L~p~t~Y~frV~A~n 96 (120)
T 2crm_A 73 ATREHLCDRLNPGCFYRLRVYCIS 96 (120)
T ss_dssp SCSEEEECSCCTTSCEEEEEEEEE
T ss_pred cccEEEECCCCCCCEEEEEEEEEc
Confidence 356899999999999998887654
No 90
>1g91_A MPIF-1, myeloid progenitor inhibitory factor-1; chemokine, cytokine, CKB8, CCL23; NMR {Homo sapiens} SCOP: d.9.1.1 PDB: 2hcc_A
Probab=44.90 E-value=7.1 Score=23.76 Aligned_cols=15 Identities=13% Similarity=0.038 Sum_probs=12.7
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 36 ~~~aVIf~tk~g~~v 50 (77)
T 1g91_A 36 SKPGVIFLTKKGRRF 50 (77)
T ss_dssp SSCCEEEECTTSCEE
T ss_pred CCcEEEEEEcCCCEE
Confidence 568999999999863
No 91
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=44.89 E-value=19 Score=24.16 Aligned_cols=22 Identities=14% Similarity=0.270 Sum_probs=19.5
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
-++.+.||.|...|.+.|...-
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 6799999999999999887765
No 92
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=44.88 E-value=24 Score=21.79 Aligned_cols=24 Identities=17% Similarity=0.073 Sum_probs=19.5
Q ss_pred ccceEEEeCCCCCCCeeEEEEEEE
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
....+.+.||.|...|.+.|...-
T Consensus 66 ~~~~~~v~~L~p~t~Y~frV~A~N 89 (112)
T 1bpv_A 66 LENEFTVSGLTEDAAYEFRVIAKN 89 (112)
T ss_dssp CSSEEEECSCCSSCCEEEEEEEEC
T ss_pred ccCEEEECCCCCCCEEEEEEEEEE
Confidence 356899999999999998876554
No 93
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=44.44 E-value=14 Score=23.10 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=18.9
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.++.|.||.|...|.+.|...-
T Consensus 81 ~~~~i~~L~p~t~Y~~~V~A~n 102 (126)
T 1x5i_A 81 RYYTIENLDPSSHYVITLKAFN 102 (126)
T ss_dssp CEEEECSCCSSCEECCEEEEEC
T ss_pred eEEEEeCCCCCCEEEEEEEEEe
Confidence 6789999999999998887654
No 94
>1dok_A MCP-1, MCAF, monocyte chemoattractant protein 1; cytokine,; 1.85A {Homo sapiens} SCOP: d.9.1.1 PDB: 1dol_A 1dom_A 1don_A 2bdn_A 3ifd_A 2nz1_D 1ml0_D 1bo0_A 1ncv_A
Probab=44.32 E-value=7.1 Score=23.60 Aligned_cols=15 Identities=20% Similarity=0.317 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|++||..
T Consensus 38 ~~~aVIf~tk~g~~v 52 (77)
T 1dok_A 38 PKEAVIFKTIVAKEI 52 (77)
T ss_dssp SSCEEEEEETTCCEE
T ss_pred CCcEEEEEEcCCCEE
Confidence 568999999999853
No 95
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.09 E-value=18 Score=21.80 Aligned_cols=23 Identities=9% Similarity=0.213 Sum_probs=19.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|...|.+.|...-
T Consensus 84 ~~~~~i~~L~p~t~Y~~~V~A~n 106 (124)
T 2ed9_A 84 NLWYLFTGLEKGSQYSFQVSAMT 106 (124)
T ss_dssp CSEEEEECCCSSCEEEECEEEEC
T ss_pred cCEEEEcCCCCCCEEEEEEEEEc
Confidence 46789999999999998887654
No 96
>2q8t_A CCL14; common CC chemokine fold, cytokine; 2.23A {Homo sapiens}
Probab=44.03 E-value=7 Score=23.45 Aligned_cols=15 Identities=0% Similarity=-0.146 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 41 ~~~aVIf~tk~g~~v 55 (74)
T 2q8t_A 41 SKPGIVFITKRGHSV 55 (74)
T ss_dssp SSCCEEEEETTSCEE
T ss_pred CCceEEEEecCCCEE
Confidence 568999999999863
No 97
>1f2l_A Fractalkine; chemoattractant, neurotactin, cytokine; 2.00A {Homo sapiens} SCOP: d.9.1.1 PDB: 3ona_B 1b2t_A
Probab=43.92 E-value=5.8 Score=24.07 Aligned_cols=15 Identities=13% Similarity=-0.103 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 35 ~~~aVIf~tk~gr~v 49 (76)
T 1f2l_A 35 GKRAIILETRQHRLF 49 (76)
T ss_dssp SSCCEEEEETTCCEE
T ss_pred CCeEEEEEEcCCCEE
Confidence 568999999999853
No 98
>1f9p_A CTAP-III, connective tissue activating peptide-III; chemokine-heparin analog complex, blood clotting; 1.93A {Homo sapiens} SCOP: d.9.1.1
Probab=43.89 E-value=7.2 Score=24.20 Aligned_cols=15 Identities=7% Similarity=-0.075 Sum_probs=12.5
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+||+||..
T Consensus 47 ~~~aVIf~tk~g~~v 61 (85)
T 1f9p_A 47 NQVEVIATLKDGRKI 61 (85)
T ss_dssp CSCEEEEEETTSCEE
T ss_pred CCCEEEEEecCCCeE
Confidence 468999999999863
No 99
>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*
Probab=42.81 E-value=16 Score=26.37 Aligned_cols=17 Identities=12% Similarity=-0.054 Sum_probs=14.3
Q ss_pred CceeeecccCCcCCCcc
Q psy9084 4 DEALCGWPWISRRMFPT 20 (103)
Q Consensus 4 ~~~~~~~t~~GRrmFP~ 20 (103)
+-+.|++++.||.-||+
T Consensus 199 ~g~~i~v~~~~r~W~p~ 215 (252)
T 3pkv_A 199 QDLFLLLGPPGRRWLFS 215 (252)
T ss_dssp TTEEEEEECSCSBCTTS
T ss_pred CcEEEEEcCCCCccccc
Confidence 45678889999999995
No 100
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.71 E-value=14 Score=22.09 Aligned_cols=25 Identities=16% Similarity=0.107 Sum_probs=20.9
Q ss_pred ccceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 19 PTFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 19 P~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
...++.|.||.|...|.+.|...-.
T Consensus 74 ~~~~~~i~~L~p~t~Y~~~V~A~n~ 98 (121)
T 2dlh_A 74 DSQITTIGNLVPQKTYSVKVLAFTS 98 (121)
T ss_dssp SCSEECCBSCCSSCEEEEEEEEEES
T ss_pred CceEEEecCCCCCCEEEEEEEEEeC
Confidence 3567899999999999998887653
No 101
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=42.55 E-value=36 Score=24.14 Aligned_cols=41 Identities=12% Similarity=-0.076 Sum_probs=28.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEccC---CceeeeeccceeEee
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPVDD---KRYRYAFHRQIGSLV 60 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~d~---~ryry~~~~~~vsF~ 60 (103)
...+.|.||+|...|.+-|....... ....|..-++.+.|.
T Consensus 266 ~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~ 309 (314)
T 3bpo_C 266 TSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIG 309 (314)
T ss_dssp EEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEES
T ss_pred ceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEec
Confidence 56899999999999999999887521 223344444556554
No 102
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=42.43 E-value=25 Score=22.27 Aligned_cols=21 Identities=14% Similarity=0.066 Sum_probs=17.0
Q ss_pred ceEEEeCCCCCCCeeEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
-.+.|.||.|...|.+.|-.+
T Consensus 64 ~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 64 DHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp CCEEECCCCTTCCEEEEEEEE
T ss_pred CEEEEcCCCCCCEEEEEEEEE
Confidence 468899999999999877544
No 103
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=42.23 E-value=16 Score=23.22 Aligned_cols=22 Identities=18% Similarity=0.161 Sum_probs=19.1
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
..++.|.||+|...|.+.|...
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~ 95 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPY 95 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEE
Confidence 4689999999999999888764
No 104
>2ra4_A Small-inducible cytokine A13; CCL13, MCP-4, CC chemokine family, chemotaxis, monocytes, CY inflammatory response, pyrrolidone carboxylic acid; 1.70A {Homo sapiens}
Probab=41.48 E-value=8 Score=23.32 Aligned_cols=15 Identities=13% Similarity=0.255 Sum_probs=12.6
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|++||..
T Consensus 37 ~~~aVIf~tk~g~~v 51 (76)
T 2ra4_A 37 PQKAVIFRTKLGKEI 51 (76)
T ss_dssp SSCCEEEEETTSCEE
T ss_pred CCcEEEEEEcCCCEE
Confidence 568999999999853
No 105
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.34 E-value=14 Score=22.08 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.+.||.|...|.+.|...-
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYN 95 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEE
T ss_pred ceEEEeCCCCCCCEEEEEEEEEc
Confidence 56899999999999998887765
No 106
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=41.24 E-value=27 Score=20.03 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=18.6
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..+.+.||.|...|.+.|...-
T Consensus 51 ~~~~~~~L~~~t~Y~~~V~A~n 72 (88)
T 1k85_A 51 TTATISGLAADTSYTFTVKAKD 72 (88)
T ss_dssp SEEEECCCCSSCEEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 5788999999999998877664
No 107
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=40.83 E-value=26 Score=24.35 Aligned_cols=24 Identities=17% Similarity=0.247 Sum_probs=19.7
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
..+.|.||+|...|++.+.....+
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~ 196 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPG 196 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSS
T ss_pred cEEEEecCCCCCcEEEEEEEEEcC
Confidence 467788999999999999986543
No 108
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=40.76 E-value=21 Score=23.71 Aligned_cols=22 Identities=14% Similarity=-0.028 Sum_probs=17.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
.+.++++||+|...|.+..=-.
T Consensus 18 ~VtV~~tGl~p~~~y~v~~Ca~ 39 (113)
T 1noa_A 18 VVKVAGAGLQAGTAYDVGQCAW 39 (113)
T ss_dssp EEEEEEESCCTTCEEEEEEEEE
T ss_pred EEEEEEEccCCCCeEEEEEccc
Confidence 4789999999999999765433
No 109
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=40.69 E-value=21 Score=23.66 Aligned_cols=22 Identities=27% Similarity=0.227 Sum_probs=17.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
.+.++++||+|+..|.+..=-.
T Consensus 17 ~VtV~~tGl~p~~~y~v~~Ca~ 38 (112)
T 2mcm_A 17 TVTVSATGLTPGTVYHVGQCAV 38 (112)
T ss_dssp EEEEEEESCCTTCEEEEEEEEE
T ss_pred EEEEEEEccCCCCeEEEEEccc
Confidence 4689999999999999765433
No 110
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=40.40 E-value=18 Score=21.75 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=18.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.+.||.|...|.+.|...-
T Consensus 72 ~~~~~v~~L~p~t~Y~frV~A~n 94 (118)
T 1x3d_A 72 QKQFKITKLSPAMGCKFRLSARN 94 (118)
T ss_dssp CSEEEEESCCTTCEEEEECCEEE
T ss_pred CcEEEeCCCCCCCEEEEEEEEEE
Confidence 36789999999999998776654
No 111
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=40.32 E-value=59 Score=22.07 Aligned_cols=23 Identities=17% Similarity=0.125 Sum_probs=19.9
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
.++.+.||+|...|.+-|.....
T Consensus 180 ~~~~l~~L~p~t~Y~vqVRa~~~ 202 (227)
T 1eer_B 180 TECVLSNLRGRTRYTFAVRARMA 202 (227)
T ss_dssp CEEEECCCCSSCEEEEEEEEEEC
T ss_pred eEEEEcccCCCCeEEEEEEEeEC
Confidence 47889999999999999998853
No 112
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=39.90 E-value=26 Score=22.92 Aligned_cols=23 Identities=17% Similarity=0.275 Sum_probs=19.7
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
.++.+.||.|...|.+.|...-.
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~~~ 187 (201)
T 2ha1_A 165 TSVNIPDLLPGRKYIVNVYQISE 187 (201)
T ss_dssp CEEEECSCCTTCEEEEEEEEEET
T ss_pred eEEEeCCCCCCCEEEEEEEEEcC
Confidence 67899999999999998877653
No 113
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=39.69 E-value=20 Score=21.34 Aligned_cols=23 Identities=13% Similarity=0.215 Sum_probs=17.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||.|...|.+.|...-
T Consensus 64 ~~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2crz_A 64 EVECTVSSLLPGKTYSFRLRAAN 86 (110)
T ss_dssp CSEEEEESCCTTCEEEECCEEEC
T ss_pred cEEEEECCcCCCCEEEEEEEEEc
Confidence 46788899999999987776553
No 114
>3gv3_A CXCL12 protein; SDF, chemokine, disulfide bond, cytokine; 1.60A {Homo sapiens} SCOP: d.9.1.1 PDB: 2nwg_A* 2kee_A 2kec_A 2ked_A 3hp3_A 2j7z_A 1qg7_A 1sdf_A 2sdf_A 1a15_A 2kol_A 2k01_A 2k03_A* 2k04_A 2k05_A*
Probab=38.79 E-value=8.6 Score=22.30 Aligned_cols=15 Identities=7% Similarity=-0.008 Sum_probs=12.1
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
|.+|+|-.|++||.+
T Consensus 31 ~~~aIif~tk~g~~v 45 (63)
T 3gv3_A 31 ALQIVARLKNNNRQV 45 (63)
T ss_dssp SCCEEEEETTTCCEE
T ss_pred CCcEEEEEEeCCCEE
Confidence 568889889999863
No 115
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.72 E-value=22 Score=21.82 Aligned_cols=23 Identities=13% Similarity=0.024 Sum_probs=19.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.|.||.|...|.+.|...-
T Consensus 78 ~~~~~l~~L~p~t~Y~~~V~A~n 100 (124)
T 2dbj_A 78 GSRARISVQVHNATCTVRIAAVT 100 (124)
T ss_dssp TSCEEEECCCSSSEEEECEEEEE
T ss_pred cceEEecCCCCCCEEEEEEEEEC
Confidence 35789999999999998887664
No 116
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=37.97 E-value=28 Score=22.99 Aligned_cols=23 Identities=35% Similarity=0.364 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|...-
T Consensus 167 ~~~~~i~~L~p~t~Y~~~V~A~~ 189 (203)
T 2gee_A 167 DNAVVLTNLLPGTEYVVSVSSVY 189 (203)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEec
Confidence 36889999999999999887665
No 117
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=37.87 E-value=26 Score=23.14 Aligned_cols=22 Identities=18% Similarity=0.265 Sum_probs=19.1
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.++.|.||.|...|.+-|...-
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n 103 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEY 103 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEEe
Confidence 5788999999999999988665
No 118
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=37.75 E-value=34 Score=21.72 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=19.2
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..+.|.||.|...|.+-|..+-
T Consensus 75 t~~~v~gL~p~t~Y~frV~A~n 96 (120)
T 1wfu_A 75 TRHVVEGLEPRTLYKFRLKVTS 96 (120)
T ss_dssp SEEEEESCCTTCEEEEEEEEEC
T ss_pred cEEEECCCCCCCEEEEEEEEEC
Confidence 5689999999999998888775
No 119
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=37.57 E-value=64 Score=21.17 Aligned_cols=23 Identities=26% Similarity=0.280 Sum_probs=18.6
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
..+.+.||.|...|.+.|.....
T Consensus 172 ~~~~l~~L~p~t~Y~~~Vra~~~ 194 (215)
T 1cd9_B 172 DQFELCGLHQAPVYTLQMRCIRS 194 (215)
T ss_dssp EEEEECCCCSCSCEEEEEEEEES
T ss_pred eEEEEcCCCCCCEEEEEEEeeEC
Confidence 56788888888888888887764
No 120
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=37.09 E-value=40 Score=22.56 Aligned_cols=24 Identities=13% Similarity=0.079 Sum_probs=20.5
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
.++.+.+|+|...|.+-|...+.+
T Consensus 151 ~~~~l~~l~p~~~Y~vqVR~~~~~ 174 (199)
T 2b5i_C 151 HKFSLPSVDGQKRYTFRVRSRFNP 174 (199)
T ss_dssp CEEEECSCCTTSCEEEEEEEECCS
T ss_pred eEEEecCCCCCcEEEEEEEEeccC
Confidence 578889999999999999987743
No 121
>1lv9_A Small inducible cytokine B10; chemokine; HET: MLE; NMR {Synthetic} SCOP: d.9.1.1 PDB: 1o7y_A 1o7z_A 1o80_A
Probab=36.93 E-value=9.6 Score=22.99 Aligned_cols=14 Identities=7% Similarity=-0.007 Sum_probs=11.7
Q ss_pred CCceeeeccc-CCcC
Q psy9084 3 PDEALCGWPW-ISRR 16 (103)
Q Consensus 3 ~~~~~~~~t~-~GRr 16 (103)
+.+|+|.+|| +||.
T Consensus 37 ~~~~VIf~tk~~g~~ 51 (77)
T 1lv9_A 37 PRVEIIATMKKKGEK 51 (77)
T ss_dssp SSEEEEEEETTTTEE
T ss_pred CCCEEEEEECcCCCe
Confidence 4689999999 9974
No 122
>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*
Probab=36.76 E-value=34 Score=24.14 Aligned_cols=22 Identities=23% Similarity=0.472 Sum_probs=19.0
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
-.+.+.+|+|...|++.+...-
T Consensus 167 ~~~~l~~L~p~t~YCv~v~~~~ 188 (211)
T 3dlq_R 167 REYEFFGLTPDTEFLGTIMILV 188 (211)
T ss_dssp SEEEEESCCTTCEEEEEEEEEE
T ss_pred CEEEEccCCCCCcEEEEEEEEE
Confidence 4678899999999999999865
No 123
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=35.20 E-value=35 Score=21.67 Aligned_cols=23 Identities=13% Similarity=0.121 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|...-
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A~n 179 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSAQN 179 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEEE
T ss_pred ccEEEeCCcCCCCEEEEEEEEEe
Confidence 46789999999999998887665
No 124
>3cxe_C Granulocyte-macrophage colony-stimulating factor subunit alpha; GM-CSF, receptor complex, dodecamer, disease mutation, glyco membrane; HET: NAG BMA; 3.30A {Homo sapiens}
Probab=34.83 E-value=17 Score=24.12 Aligned_cols=39 Identities=10% Similarity=0.009 Sum_probs=26.6
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEccCCceeeeeccceeEeec
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVDDKRYRYAFHRQIGSLVS 61 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry~~~~~~vsF~k 61 (103)
-++.+.+++|.++|.|-|........+ |..-+|+++|.+
T Consensus 79 ~~~~~~~~~~~~~ytVrVRa~~~~~~~--WS~WSqp~~ig~ 117 (120)
T 3cxe_C 79 NRYNFPSSEPRAKHSVKIRAADVRILN--WSSWSEAIEFGS 117 (120)
T ss_dssp CCCCCBCCSTTCBCCCEEEEEESSSCC--CBCCCCCCCBC-
T ss_pred ceeEeeecCCCccEEEEEEeCCCCCCc--cCCCCCceEccc
Confidence 456678889999999888866544444 566667776654
No 125
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=34.58 E-value=45 Score=21.97 Aligned_cols=24 Identities=17% Similarity=0.501 Sum_probs=20.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
..++.|.||.|...|.+-|.....
T Consensus 164 ~~~~~l~~L~p~t~Y~v~Vra~~~ 187 (210)
T 3n06_B 164 QTEFKILSLHPGQKYLVQVRCKPD 187 (210)
T ss_dssp CSEEEECCCCTTCEEEEEEEEEES
T ss_pred ceEEEEeccCCCCEEEEEEEEecC
Confidence 357889999999999999988873
No 126
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=34.56 E-value=44 Score=22.42 Aligned_cols=22 Identities=14% Similarity=0.055 Sum_probs=19.5
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..+.+.||.|...|.+.|...-
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n 181 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARN 181 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEE
T ss_pred eEEEeCCCCCCCeEEEEEEEEC
Confidence 5899999999999999888765
No 127
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=34.27 E-value=29 Score=21.44 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=18.2
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..+.|.||.|...|.+-|..+-
T Consensus 71 ~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 71 FTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEECSCCSSEEEEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEe
Confidence 4688999999999998886654
No 128
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=33.99 E-value=36 Score=22.22 Aligned_cols=22 Identities=9% Similarity=0.188 Sum_probs=19.0
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..+.+.||.|...|.+.|...-
T Consensus 174 ~~~~i~~L~p~t~Y~~~V~A~n 195 (214)
T 2ibg_A 174 RSFKIAPLETATMYEFKLQSFS 195 (214)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred eEEEeCCCCCCCEEEEEEEEEc
Confidence 5789999999999998887764
No 129
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=33.72 E-value=41 Score=21.51 Aligned_cols=23 Identities=22% Similarity=0.225 Sum_probs=19.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.+.||.|...|.+.|....
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~ 79 (186)
T 1qr4_A 57 STSFILRGLDAGTEYTISLVAEK 79 (186)
T ss_dssp CSEEEEESCCSSCEEEEEEEEES
T ss_pred CCEEEECCCCCCCEEEEEEEEEc
Confidence 35789999999999999888754
No 130
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=33.39 E-value=38 Score=22.17 Aligned_cols=22 Identities=32% Similarity=0.197 Sum_probs=19.0
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.++.+.||.|...|.+.|...-
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n 186 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVAEN 186 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEEEe
Confidence 5789999999999998887665
No 131
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=33.39 E-value=20 Score=22.83 Aligned_cols=21 Identities=14% Similarity=0.094 Sum_probs=17.5
Q ss_pred ceEEEeCCCCCCCeeEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
.+|.|+||.|.-.|..-+--+
T Consensus 38 nSYtIsGLkPGvtYegQLisV 58 (89)
T 1q38_A 38 NSYTIKGLKPGVVYEGQLISI 58 (89)
T ss_dssp SCCCCCCCCTTCCEEEEEEEE
T ss_pred ceEEEeccCCCcEEEEEEEee
Confidence 689999999999999766544
No 132
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=33.26 E-value=34 Score=23.79 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=21.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
..++.|.||+|...|.+-|.....+
T Consensus 194 ~~~~~l~~L~p~t~Y~vqVRa~~~~ 218 (236)
T 1axi_B 194 TTSVPVYSLKVDKEYEVRVRSKQRN 218 (236)
T ss_dssp SSEEEEEEEETTSCEEEEEEEEETT
T ss_pred CCEEEEeccCCCCEEEEEEEEEECC
Confidence 3688999999999999999988754
No 133
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=32.85 E-value=38 Score=22.16 Aligned_cols=23 Identities=13% Similarity=0.223 Sum_probs=19.6
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|...-
T Consensus 165 ~~~~~i~~L~p~t~Y~~~V~A~n 187 (211)
T 3p4l_A 165 RLTHQIQELTLDTPYYFKIQARN 187 (211)
T ss_dssp CSEEEECCCCTTCEEEEEEEEEE
T ss_pred eeEEEEcCCCCCCEEEEEEEEEc
Confidence 45789999999999999887765
No 134
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=32.43 E-value=23 Score=30.21 Aligned_cols=33 Identities=15% Similarity=0.233 Sum_probs=21.5
Q ss_pred ceeeecccC-CcCCCccceEEEeCCCCCCCeeEE
Q psy9084 5 EALCGWPWI-SRRMFPTFQVRLFNLDPDAEYMLM 37 (103)
Q Consensus 5 ~~~~~~t~~-GRrmFP~l~~~vsGL~p~~~Y~v~ 37 (103)
++++..-+. .+.--|...+++.||||++.|.+.
T Consensus 663 ~avv~~~~~~~~~~~~~~~~rl~GLdp~~~Y~v~ 696 (745)
T 3mi6_A 663 QAIAARYQLLNHPNAPYTRFYFKGLRPNQRYQIN 696 (745)
T ss_dssp EEEEEEEESSCCSSCCCEEECCCSCCTTCEEEET
T ss_pred EEEEEEEEecccCCCCccceECCCCCCCCeEEEC
Confidence 455533322 222334567999999999999974
No 135
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=32.11 E-value=31 Score=23.43 Aligned_cols=42 Identities=5% Similarity=-0.029 Sum_probs=22.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEccCCceeeeeccceeEeecC
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPVDDKRYRYAFHRQIGSLVSL 62 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~d~~ryry~~~~~~vsF~kq 62 (103)
.+.+.+.+|.|.+.|.+-|...+.+ ....|..-++++.|..+
T Consensus 158 ~~~~~~~~L~p~~~Y~vqVR~k~~~-~~G~WSeWS~~~~~~t~ 199 (207)
T 1iar_B 158 SLRIAASTLKSGISYRARVRAWAQA-YNTTWSEWSPSTKWHNS 199 (207)
T ss_dssp EEEECC-----CCCEEEEEEEECGG-GTCCCCCCCCCEEEC--
T ss_pred EEEEEHHHCCCCCEEEEEEEEecCC-CCCCCCCCCcCeEEECC
Confidence 3455567888999999888888754 33345555566776653
No 136
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=31.99 E-value=40 Score=21.96 Aligned_cols=23 Identities=4% Similarity=0.098 Sum_probs=19.4
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
..++.+.||.|...|.+.|...-
T Consensus 163 ~~~~~i~~L~p~t~Y~~~V~A~n 185 (205)
T 1cfb_A 163 QNNIVIADQPTFVKYLIKVVAIN 185 (205)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEE
T ss_pred ccEEEEcCCCCCcEEEEEEEEEc
Confidence 36889999999999998887665
No 137
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=30.90 E-value=67 Score=21.52 Aligned_cols=24 Identities=25% Similarity=0.110 Sum_probs=20.8
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
..+.+.||+|...|.+-|......
T Consensus 167 ~~~~l~~L~p~t~Y~vqVRa~~~~ 190 (206)
T 3v6o_A 167 KSVSLPVPDLCAVYAVQVRCKRLD 190 (206)
T ss_dssp CEEEECCSCTTSCEEEEEEEEETT
T ss_pred eeEEeecCCCCCEEEEEEEEecCC
Confidence 468899999999999999988864
No 138
>1vmc_A Stromal cell-derived factor 1; CXC-chemokine, cytokine; NMR {Homo sapiens} SCOP: d.9.1.1
Probab=30.07 E-value=12 Score=21.95 Aligned_cols=15 Identities=7% Similarity=-0.008 Sum_probs=11.9
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+.+++|.+|++||..
T Consensus 38 ~~~aIIf~tk~g~~v 52 (71)
T 1vmc_A 38 ALQIVARLKNNNRQV 52 (71)
T ss_dssp EEEEEEEETTTTEEE
T ss_pred CCCEEEEEEcCCCEE
Confidence 458899999999853
No 139
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=29.62 E-value=53 Score=22.37 Aligned_cols=22 Identities=27% Similarity=0.458 Sum_probs=19.3
Q ss_pred ceEEEeCCCCCCCeeEEEEEEE
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.++.+.||.|...|.+.|....
T Consensus 248 ~~~~i~~L~p~t~Y~~~V~A~~ 269 (283)
T 1tdq_A 248 TSYTLTDLEPGAEYIISITAER 269 (283)
T ss_dssp SEEEECCCCTTCCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEc
Confidence 5789999999999999888765
No 140
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=29.53 E-value=49 Score=21.62 Aligned_cols=25 Identities=20% Similarity=0.337 Sum_probs=21.1
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
...+.|.||.|...|.+.|......
T Consensus 163 ~~~~~i~~L~p~t~Y~~~V~A~n~~ 187 (215)
T 1bqu_A 163 RSSFTVQDLKPFTEYVFRIRCMKED 187 (215)
T ss_dssp CSEEEECSCCSSEEEEEEEEEEETT
T ss_pred cceEEeCCCCCCCEEEEEEEEccCC
Confidence 3589999999999999998887643
No 141
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=29.23 E-value=19 Score=24.93 Aligned_cols=23 Identities=17% Similarity=0.349 Sum_probs=9.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
...+.|.||+|...|++.+....
T Consensus 171 ~~~~~i~~L~p~t~Ycv~V~a~~ 193 (211)
T 3g9v_A 171 HRAVEIEALTPHSSYCVVAEIYQ 193 (211)
T ss_dssp SCCCC----------CEEEEEEE
T ss_pred CcEEEEecCCCCCeEEEEEEEEe
Confidence 34667889999999999998875
No 142
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=29.13 E-value=44 Score=24.00 Aligned_cols=24 Identities=17% Similarity=0.423 Sum_probs=20.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
.-.+.|.||+|...|++.+...-.
T Consensus 158 ~~~~~l~~L~p~t~Y~~~V~A~~~ 181 (306)
T 3s98_A 158 YSRHKIYKLSPETTYCLKVKAALL 181 (306)
T ss_dssp CTEEEECSCCTTCEEEEEEEEEEG
T ss_pred cceEEEccCCCCCeEEEEEEEEEc
Confidence 457899999999999999988763
No 143
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=28.63 E-value=70 Score=23.79 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=21.8
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
.-.+.|.||+|...|.+-|......
T Consensus 376 ~~~~~l~~L~p~t~Y~~qVRa~~~~ 400 (419)
T 2gys_A 376 AHSMALPALEPSTRYWARVRVRTSR 400 (419)
T ss_dssp CSEEECCCCCSSCCCEEEEEEEECC
T ss_pred ccEEEeccCCCCCeEEEEEEEEEcC
Confidence 4578999999999999999988865
No 144
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=28.45 E-value=73 Score=22.48 Aligned_cols=41 Identities=10% Similarity=-0.060 Sum_probs=28.6
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEccC--CceeeeeccceeEeec
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVDD--KRYRYAFHRQIGSLVS 61 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d~--~ryry~~~~~~vsF~k 61 (103)
-++.+.+|+|...|.+-|.....+. ..-.|..-++++.|..
T Consensus 189 ~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t 231 (247)
T 2erj_C 189 HKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS 231 (247)
T ss_dssp CEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEEC
Confidence 4788999999999999999887542 1222444456666655
No 145
>1akp_A Apokedarcidin; antibiotic chromoprotein; NMR {Actinomycete atcc 53650} SCOP: b.1.7.1
Probab=28.27 E-value=25 Score=23.36 Aligned_cols=22 Identities=9% Similarity=0.013 Sum_probs=17.7
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
.+.++++||+|+..|.+..=-.
T Consensus 18 tVtVs~tGl~p~~~y~v~qCa~ 39 (114)
T 1akp_A 18 TVTVSASGFATSTSATALQCAI 39 (114)
T ss_dssp BCCEEEECCSSCSCBBCCEEEE
T ss_pred EEEEEEEccCCCCeEEEEEccc
Confidence 4689999999999999765433
No 146
>3nqk_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.61A {Bacteroides ovatus} PDB: 3sot_A*
Probab=28.14 E-value=45 Score=25.64 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=29.3
Q ss_pred ecccCCcCCC-ccceEEEeCCCCCCCeeEEEEEEEccC
Q psy9084 9 GWPWISRRMF-PTFQVRLFNLDPDAEYMLMMDFVPVDD 45 (103)
Q Consensus 9 ~~t~~GRrmF-P~l~~~vsGL~p~~~Y~v~v~~~~~d~ 45 (103)
++-++|-..- -.+.+++.||++...|.|=+.|..+..
T Consensus 99 VtIpAG~~~s~~~I~f~l~~Ld~~~~YvLPl~I~s~s~ 136 (319)
T 3nqk_A 99 VHIPAGSCVELLNIDFNLQDIDMLEKWVLPLTIVDDGS 136 (319)
T ss_dssp EEECTTCCEEEEEEEEECTTCCTTSCEEEEEEEEECSC
T ss_pred EEEcCCCEeeeeeEEEEeCCCCCCCeEEEEEEEEecCC
Confidence 3445677554 457888999999999999999998766
No 147
>1x4r_A PARP14 protein; WWE domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.67 E-value=43 Score=21.58 Aligned_cols=16 Identities=6% Similarity=0.075 Sum_probs=13.7
Q ss_pred CceeeeeccceeEeec
Q psy9084 46 KRYRYAFHRQIGSLVS 61 (103)
Q Consensus 46 ~ryry~~~~~~vsF~k 61 (103)
-.|.|.++.+-++|||
T Consensus 27 VeWqY~d~~~~~~FDk 42 (99)
T 1x4r_A 27 VEWQYIDKNITQCFDK 42 (99)
T ss_dssp CEEEEECSSCEEECCT
T ss_pred hEEEEeCCCeEeechH
Confidence 4699988878899999
No 148
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=27.37 E-value=52 Score=22.57 Aligned_cols=42 Identities=12% Similarity=0.202 Sum_probs=29.2
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEccCCce--eeeeccceeEeec
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPVDDKRY--RYAFHRQIGSLVS 61 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~d~~ry--ry~~~~~~vsF~k 61 (103)
...+.+.||.|...|.+-|...+.....| .|..-+++++|.-
T Consensus 163 ~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T 206 (219)
T 3tgx_A 163 SVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQT 206 (219)
T ss_dssp EEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEEC
T ss_pred EEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEEC
Confidence 45666779999999999999988654323 2334446676665
No 149
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=26.75 E-value=54 Score=22.54 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=20.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
..++.+.||.|...|.+.|.....
T Consensus 254 ~~~~~i~~L~p~t~Y~~~V~A~~~ 277 (290)
T 3r8q_A 254 VTEATITGLEPGTEYTIYVIALKN 277 (290)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEET
T ss_pred ccEEEECCCCCCCEEEEEEEEEeC
Confidence 358999999999999998877653
No 150
>1j8i_A Lymphotactin; chemokine, cytokine; NMR {Homo sapiens} SCOP: d.9.1.1 PDB: 1j9o_A 2jp1_A 2nyz_D 2hdm_A
Probab=26.42 E-value=19 Score=22.61 Aligned_cols=15 Identities=7% Similarity=-0.228 Sum_probs=12.4
Q ss_pred CCceeeecccCCcCC
Q psy9084 3 PDEALCGWPWISRRM 17 (103)
Q Consensus 3 ~~~~~~~~t~~GRrm 17 (103)
+..|+|.+|+.||..
T Consensus 33 ~~~aVIf~tk~gr~v 47 (93)
T 1j8i_A 33 SLRAVIFITKRGLKV 47 (93)
T ss_dssp TTCCEEEEETTSCEE
T ss_pred CCeeEEEEecCCCEE
Confidence 578999999999853
No 151
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=26.41 E-value=56 Score=22.34 Aligned_cols=23 Identities=26% Similarity=0.251 Sum_probs=19.6
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
.++.+.||.|...|.+.|...-.
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~ 275 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTD 275 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEET
T ss_pred eEEEeCCCCCCCEEEEEEEEEeC
Confidence 57899999999999998876653
No 152
>3p02_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.55A {Bacteroides ovatus}
Probab=25.97 E-value=71 Score=24.50 Aligned_cols=37 Identities=11% Similarity=-0.011 Sum_probs=29.6
Q ss_pred ecccCCcCCC-ccceEEEeCCCCCCCeeEEEEEEEccC
Q psy9084 9 GWPWISRRMF-PTFQVRLFNLDPDAEYMLMMDFVPVDD 45 (103)
Q Consensus 9 ~~t~~GRrmF-P~l~~~vsGL~p~~~Y~v~v~~~~~d~ 45 (103)
++-++|-..- -.+.+++.||++...|.|=+.|..++.
T Consensus 96 vtI~AG~~~s~~pI~~~~~~Ld~~~~YvLPl~I~s~s~ 133 (317)
T 3p02_A 96 LTIPAGQSHALLPIEFSLDGLDDSQKWALPLKVCEDAN 133 (317)
T ss_dssp EEECTTCCCCEEEEEEECTTCCTTSCEEEEEEEEEC-C
T ss_pred EEEcCCCEeeeeeEEEEcCCCCCCCeEEEEEEEEecCC
Confidence 4456787666 457888999999999999999999766
No 153
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=25.11 E-value=26 Score=21.51 Aligned_cols=22 Identities=23% Similarity=0.277 Sum_probs=17.3
Q ss_pred cceEEEeCCCCCCCeeEEEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFV 41 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~ 41 (103)
...+.|.||.|...|.+.|..+
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~ 99 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQV 99 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEE
T ss_pred ceEEEeCCCCCCCEEEEEEEEE
Confidence 3578899999999998766554
No 154
>1fyh_B Interferon-gamma receptor alpha chain; cytokine-receptor complex, fibronectin type-III, immune system; 2.04A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1fg9_C 1jrh_I
Probab=24.36 E-value=97 Score=21.81 Aligned_cols=21 Identities=14% Similarity=0.113 Sum_probs=18.6
Q ss_pred eEEEeCCCCCCCeeEEEEEEE
Q psy9084 22 QVRLFNLDPDAEYMLMMDFVP 42 (103)
Q Consensus 22 ~~~vsGL~p~~~Y~v~v~~~~ 42 (103)
.+.+.+|+|...|+|.+....
T Consensus 184 ~~~i~~L~p~t~YCv~v~~~~ 204 (229)
T 1fyh_B 184 QLAIPVSSLNSQYCVSAEGVL 204 (229)
T ss_dssp EEEEECCTTCCEEEEEEEEEE
T ss_pred eEEEeeCCCCCeEEEEEEEEe
Confidence 478899999999999999864
No 155
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=24.34 E-value=27 Score=21.22 Aligned_cols=20 Identities=15% Similarity=0.104 Sum_probs=16.0
Q ss_pred cceEEEeCCCCCCCeeEEEE
Q psy9084 20 TFQVRLFNLDPDAEYMLMMD 39 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~ 39 (103)
...+.+.||.|...|.+.|.
T Consensus 73 ~~~~~v~~L~p~t~Y~frV~ 92 (120)
T 2yux_A 73 RTSATITELVIGNEYYFRVF 92 (120)
T ss_dssp SSCCEECCCCSSEEEEEEEC
T ss_pred cCEEEECCCCCCCEEEEEEE
Confidence 45778899999999987664
No 156
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=23.30 E-value=60 Score=24.53 Aligned_cols=24 Identities=13% Similarity=0.193 Sum_probs=21.2
Q ss_pred ceEEEeCCCCCCCeeEEEEEEEcc
Q psy9084 21 FQVRLFNLDPDAEYMLMMDFVPVD 44 (103)
Q Consensus 21 l~~~vsGL~p~~~Y~v~v~~~~~d 44 (103)
-+++|+||.|...|.+.|.-....
T Consensus 424 ~~~~i~~L~p~t~Y~~~v~a~~~~ 447 (461)
T 3csg_A 424 STATISGLSPGVDYTITVYAYSYY 447 (461)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTT
T ss_pred ceEEecCCCCCCEEEEEEEEEecc
Confidence 579999999999999999877754
No 157
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=22.17 E-value=72 Score=22.69 Aligned_cols=24 Identities=25% Similarity=0.362 Sum_probs=19.9
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
...+.+.||.|...|.+.|...-.
T Consensus 330 ~~~~~i~~L~p~t~Y~~~V~A~~~ 353 (375)
T 3t1w_A 330 RNSITLTNLTPGTEYVVSIVALNG 353 (375)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEET
T ss_pred ccEEEECCCCCCCEEEEEEEEECC
Confidence 347899999999999998877653
No 158
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=21.25 E-value=91 Score=22.01 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=20.0
Q ss_pred cceEEEeCCCCCCCeeEEEEEEEc
Q psy9084 20 TFQVRLFNLDPDAEYMLMMDFVPV 43 (103)
Q Consensus 20 ~l~~~vsGL~p~~~Y~v~v~~~~~ 43 (103)
...+.+.||.|...|.+.|...-.
T Consensus 328 ~~~~~~~~L~p~t~Y~~~V~A~~~ 351 (368)
T 1fnf_A 328 KSTATISGLKPGVDYTITVYAVTG 351 (368)
T ss_dssp CCEEEECSCCTTCCEEEEEEEECC
T ss_pred eeEEEecCCCCCCEEEEEEEEeCC
Confidence 358899999999999988877653
No 159
>2hdl_A Small inducible cytokine B14; CXCL14, BRAK, chemokine; NMR {Homo sapiens}
Probab=20.60 E-value=35 Score=20.69 Aligned_cols=14 Identities=0% Similarity=-0.189 Sum_probs=11.5
Q ss_pred CCceeeeccc-----CCcC
Q psy9084 3 PDEALCGWPW-----ISRR 16 (103)
Q Consensus 3 ~~~~~~~~t~-----~GRr 16 (103)
+.+|+|.+|+ .||.
T Consensus 31 ~~~~VIfttk~~~~~~g~~ 49 (78)
T 2hdl_A 31 EEKMVIITTKSVSRYRGQE 49 (78)
T ss_dssp SSCCEEEEECSSSTTTTSE
T ss_pred CCcEEEEEEcccccCCCCE
Confidence 4689999999 7875
Done!