Your job contains 1 sequence.
>psy9085
MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGNGSQLVNIFLILGCTII
FQNKTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVM
HARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEV
GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFR
TYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKSSLDRRLLDSLWNKYWV
NTLSSSSLLTNADYLTGQMCDLSDKLEQAESALVRNFLISESQERRPETKLMKATKDCCK
TTIECIHGLMAQMIKQQLFNHNMKHVETEDSVMA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9085
(394 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0027053 - symbol:CSN5 "COP9 complex homolog subuni... 1285 5.0e-131 1
UNIPROTKB|F1MBP8 - symbol:COPS5 "Uncharacterized protein"... 1236 7.8e-126 1
UNIPROTKB|Q5ZLC3 - symbol:COPS5 "Uncharacterized protein"... 1235 9.9e-126 1
UNIPROTKB|E2QWE0 - symbol:COPS5 "Uncharacterized protein"... 1235 9.9e-126 1
UNIPROTKB|Q92905 - symbol:COPS5 "COP9 signalosome complex... 1235 9.9e-126 1
UNIPROTKB|F2Z540 - symbol:COPS5 "Uncharacterized protein"... 1235 9.9e-126 1
MGI|MGI:1349415 - symbol:Cops5 "COP9 (constitutive photom... 1235 9.9e-126 1
RGD|1310301 - symbol:Cops5 "COP9 signalosome subunit 5" s... 1235 9.9e-126 1
ZFIN|ZDB-GENE-040426-1686 - symbol:cops5 "COP9 constituti... 1231 2.6e-125 1
DICTYBASE|DDB_G0284597 - symbol:csn5 "Mov34/MPN/PAD-1 fam... 1081 2.1e-109 1
TAIR|locus:2032288 - symbol:CSN5B "COP9-signalosome 5B" s... 1066 8.1e-108 1
TAIR|locus:2017764 - symbol:CSN5A "COP9 signalosome 5A" s... 1044 1.7e-105 1
WB|WBGene00000817 - symbol:csn-5 species:6239 "Caenorhabd... 951 1.2e-95 1
UNIPROTKB|P91001 - symbol:csn-5 "COP9 signalosome complex... 951 1.2e-95 1
ASPGD|ASPL0000041877 - symbol:csnE species:162425 "Emeric... 849 8.0e-85 1
UNIPROTKB|G4N5N6 - symbol:MGG_05274 "COP9 signalosome com... 808 1.8e-80 1
UNIPROTKB|E5RHF2 - symbol:COPS5 "COP9 signalosome complex... 706 1.1e-69 1
POMBASE|SPAC1687.13c - symbol:csn5 "COP9/signalosome comp... 592 1.4e-57 1
DICTYBASE|DDB_G0272566 - symbol:psmD14 "putative multidru... 361 4.1e-33 1
SGD|S000002375 - symbol:RRI1 "Catalytic subunit of the CO... 352 3.7e-32 1
ZFIN|ZDB-GENE-070410-56 - symbol:psmd14 "proteasome (pros... 350 6.0e-32 1
UNIPROTKB|E1C6N0 - symbol:PSMD14 "Uncharacterized protein... 349 7.7e-32 1
TAIR|locus:2171696 - symbol:AT5G23540 "AT5G23540" species... 345 2.0e-31 1
UNIPROTKB|Q17QP9 - symbol:PSMD14 "Proteasome (Prosome, ma... 343 3.3e-31 1
UNIPROTKB|O00487 - symbol:PSMD14 "26S proteasome non-ATPa... 343 3.3e-31 1
UNIPROTKB|F1RPQ3 - symbol:PSMD14 "Uncharacterized protein... 343 3.3e-31 1
MGI|MGI:1913284 - symbol:Psmd14 "proteasome (prosome, mac... 343 3.3e-31 1
RGD|1594532 - symbol:Psmd14 "proteasome (prosome, macropa... 343 3.3e-31 1
UNIPROTKB|F1LMW6 - symbol:Psmd14 "Protein Psmd14" species... 343 3.3e-31 1
FB|FBgn0028694 - symbol:Rpn11 "Regulatory particle non-AT... 341 5.4e-31 1
WB|WBGene00018135 - symbol:F37A4.5 species:6239 "Caenorha... 338 1.1e-30 1
WB|WBGene00004467 - symbol:rpn-11 species:6239 "Caenorhab... 337 1.4e-30 1
UNIPROTKB|O76577 - symbol:rpn-11 "26S proteasome non-ATPa... 337 1.4e-30 1
CGD|CAL0003932 - symbol:orf19.7264 species:5476 "Candida ... 333 3.8e-30 1
SGD|S000001900 - symbol:RPN11 "Metalloprotease subunit of... 331 6.2e-30 1
ASPGD|ASPL0000076795 - symbol:AN4492 species:162425 "Emer... 323 4.4e-29 1
GENEDB_PFALCIPARUM|MAL13P1.343 - symbol:MAL13P1.343 "prot... 321 7.1e-29 1
UNIPROTKB|Q8ID28 - symbol:MAL13P1.343 "Proteasome regulat... 321 7.1e-29 1
POMBASE|SPAC31G5.13 - symbol:rpn11 "19S proteasome regula... 315 3.1e-28 1
UNIPROTKB|B5X8M4 - symbol:brcc3 "Lys-63-specific deubiqui... 154 9.0e-09 1
UNIPROTKB|Q66GV6 - symbol:brcc3 "Lys-63-specific deubiqui... 149 3.7e-08 1
UNIPROTKB|Q4VA72 - symbol:brcc3 "Lys-63-specific deubiqui... 145 1.1e-07 1
UNIPROTKB|C9JW37 - symbol:PSMD14 "26S proteasome non-ATPa... 127 1.6e-07 1
ZFIN|ZDB-GENE-051030-42 - symbol:eif3hb "eukaryotic trans... 146 1.8e-07 1
ZFIN|ZDB-GENE-040808-19 - symbol:eif3ha "eukaryotic trans... 144 3.0e-07 1
UNIPROTKB|B5RI54 - symbol:eif3h "Eukaryotic translation i... 142 5.5e-07 1
UNIPROTKB|Q56JZ5 - symbol:EIF3H "Eukaryotic translation i... 138 1.6e-06 1
UNIPROTKB|O15372 - symbol:EIF3H "Eukaryotic translation i... 138 1.6e-06 1
MGI|MGI:1915385 - symbol:Eif3h "eukaryotic translation in... 138 1.6e-06 1
RGD|735178 - symbol:Eif3h "eukaryotic translation initiat... 138 1.6e-06 1
UNIPROTKB|B3KS98 - symbol:EIF3S3 "Eukaryotic translation ... 138 1.8e-06 1
UNIPROTKB|Q5PPY6 - symbol:eif3h "Eukaryotic translation i... 137 1.9e-06 1
UNIPROTKB|Q5ZLE6 - symbol:EIF3H "Eukaryotic translation i... 133 5.8e-06 1
UNIPROTKB|B5FY35 - symbol:EIF3H "Eukaryotic translation i... 133 5.8e-06 1
UNIPROTKB|Q6P381 - symbol:eif3h "Eukaryotic translation i... 131 9.0e-06 1
UNIPROTKB|B6MUN4 - symbol:MYSM1 "Histone H2A deubiquitina... 136 1.0e-05 1
MGI|MGI:3647286 - symbol:Gm5136 "predicted gene 5136" spe... 128 1.4e-05 1
TAIR|locus:2016279 - symbol:BRCC36A "AT1G80210" species:3... 127 3.6e-05 1
UNIPROTKB|G4NCJ9 - symbol:MGG_01059 "26S proteasome regul... 124 6.2e-05 1
RGD|1588543 - symbol:Brcc3 "BRCA1/BRCA2-containing comple... 105 6.4e-05 3
TAIR|locus:2083318 - symbol:BRCC36B "AT3G06820" species:3... 122 0.00013 1
MGI|MGI:2389572 - symbol:Brcc3 "BRCA1/BRCA2-containing co... 106 0.00022 2
UNIPROTKB|F1RZ41 - symbol:BRCC36 "Uncharacterized protein... 109 0.00033 2
TAIR|locus:2196469 - symbol:TIF3H1 "AT1G10840" species:37... 115 0.00057 1
UNIPROTKB|A5PJP6 - symbol:BRCC3 "Lys-63-specific deubiqui... 105 0.00062 2
UNIPROTKB|G5E595 - symbol:BRCC3 "Lys-63-specific deubiqui... 105 0.00062 2
POMBASE|SPCC1682.10 - symbol:rpn8 "19S proteasome regulat... 114 0.00069 1
FB|FBgn0022023 - symbol:eIF-3p40 "Eukaryotic initiation f... 114 0.00074 1
SGD|S000005787 - symbol:RPN8 "non-ATPase regulatory subun... 114 0.00074 1
FB|FBgn0002579 - symbol:RpL36 "Ribosomal protein L36" spe... 92 0.00099 1
>FB|FBgn0027053 [details] [associations]
symbol:CSN5 "COP9 complex homolog subunit 5" species:7227
"Drosophila melanogaster" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome"
evidence=ISS;NAS;IMP;IDA;TAS] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0001751
"compound eye photoreceptor cell differentiation" evidence=IMP;TAS]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007310 "oocyte
dorsal/ventral axis specification" evidence=IMP] [GO:0007314
"oocyte anterior/posterior axis specification" evidence=IMP]
[GO:0000338 "protein deneddylation" evidence=IMP] [GO:0019781
"NEDD8 activating enzyme activity" evidence=IMP] [GO:0048477
"oogenesis" evidence=TAS] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0032435 "negative regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE014297
GO:GO:0005737 GO:GO:0007095 GO:GO:0050821 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0007409 GO:GO:0008180
eggNOG:COG1310 GO:GO:0001751 GO:GO:0008347 GO:GO:0045787
GO:GO:0032435 GO:GO:0007314 GO:GO:0000338 GO:GO:0019781 KO:K09613
OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
EMBL:AF129083 EMBL:AF132563 RefSeq:NP_477442.1 UniGene:Dm.1223
ProteinModelPortal:Q9XZ58 SMR:Q9XZ58 DIP:DIP-22022N IntAct:Q9XZ58
MINT:MINT-884235 STRING:Q9XZ58 PaxDb:Q9XZ58 PRIDE:Q9XZ58
EnsemblMetazoa:FBtr0083292 GeneID:42000 KEGG:dme:Dmel_CG14884
CTD:42000 FlyBase:FBgn0027053 InParanoid:Q9XZ58 OrthoDB:EOG4ZCRM3
PhylomeDB:Q9XZ58 ChiTaRS:COPS5 GenomeRNAi:42000 NextBio:826668
Bgee:Q9XZ58 GermOnline:CG14884 GO:GO:0007310 Uniprot:Q9XZ58
Length = 327
Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
Identities = 236/317 (74%), Positives = 272/317 (85%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW +ENNI+TL + DEIF+YD ++Q+ +I AKPWEKDPHFFKDIKISALALLKMVMHAR
Sbjct: 8 KTWELENNIQTLPSCDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHAR 67
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGGTLEVMGL+LGK++ N+MIVMDAFALPVEGTETRVNAQAQAYEYMTAY+EAAKEVGR+
Sbjct: 68 SGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRM 127
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
E+A+GWYHSHPGYGCWLSGIDVSTQMLNQ +QEPFVAIV+DPVRT+SAGKVCLG+FRTYP
Sbjct: 128 EHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYP 187
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP NEEPSEYQTIPLNKIEDFGVHCKQYY L++SYFK WNKYWVNT
Sbjct: 188 KGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTL 247
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVRNFLISESQERRPETKLMKATKDCCKTTI 363
TN +Y TGQ+ DLS+KLEQ+E+ L R ++ E+R E KL KAT+DC ++TI
Sbjct: 248 GSSGLLTNTEYTTGQIMDLSEKLEQSENFLGRG---TDVNEKRSEDKLSKATRDCSRSTI 304
Query: 364 ECIHGLMAQMIKQQLFN 380
E IHGLMAQ++K +LFN
Sbjct: 305 ELIHGLMAQIVKDKLFN 321
>UNIPROTKB|F1MBP8 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 GO:GO:0010388 KO:K09613 OMA:SAGKVCL
GeneTree:ENSGT00550000074850 CTD:10987 EMBL:DAAA02038695
IPI:IPI00700780 RefSeq:NP_001179068.1 UniGene:Bt.9730
ProteinModelPortal:F1MBP8 Ensembl:ENSBTAT00000003609 GeneID:507179
KEGG:bta:507179 NextBio:20867939 Uniprot:F1MBP8
Length = 334
Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
Identities = 230/319 (72%), Positives = 266/319 (83%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW + NN++ + DEI+KYD+K+QQ+++AAKPW KD H+FK KISALALLKMVMHAR
Sbjct: 11 KTWELANNMQEAQSVDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE AK+VGRL
Sbjct: 71 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG+FRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+L+VSYFK WNKYWVNT
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 250
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVR-NFLIS-ESQERRPETKLMKATKDCCKT 361
TNADY TGQ+ DLS+KLEQ+E+ L R +F++ E+ +R+ E KL KAT+D CKT
Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKT 310
Query: 362 TIECIHGLMAQMIKQQLFN 380
TIE IHGLM+Q+IK +LFN
Sbjct: 311 TIEAIHGLMSQVIKDKLFN 329
>UNIPROTKB|Q5ZLC3 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0008180 "signalosome"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000116528
KO:K09613 OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
CTD:10987 HOVERGEN:HBG051137 OrthoDB:EOG41NTMD EMBL:AADN02048438
EMBL:AADN02048434 EMBL:AADN02048433 EMBL:AADN02048414
EMBL:AADN02048415 EMBL:AADN02048416 EMBL:AADN02048417
EMBL:AADN02048432 EMBL:AADN02048427 EMBL:AADN02048399
EMBL:AADN02048400 EMBL:AADN02048401 EMBL:AADN02048402
EMBL:AADN02048403 EMBL:AADN02048404 EMBL:AADN02048405
EMBL:AADN02048406 EMBL:AADN02048407 EMBL:AADN02048408
EMBL:AADN02048409 EMBL:AADN02048410 EMBL:AADN02048411
EMBL:AADN02048412 EMBL:AADN02048413 EMBL:AADN02048418
EMBL:AADN02048419 EMBL:AADN02048420 EMBL:AADN02048421
EMBL:AADN02048422 EMBL:AADN02048423 EMBL:AADN02048424
EMBL:AADN02048425 EMBL:AADN02048426 EMBL:AADN02048428
EMBL:AADN02048429 EMBL:AADN02048430 EMBL:AADN02048431
EMBL:AADN02048435 EMBL:AADN02048436 EMBL:AADN02048437
EMBL:AADN02048439 EMBL:AADN02048440 EMBL:AADN02064737 EMBL:AJ719811
IPI:IPI00571765 RefSeq:NP_001034400.1 UniGene:Gga.49592
STRING:Q5ZLC3 Ensembl:ENSGALT00000023424 GeneID:426579
KEGG:gga:426579 InParanoid:Q5ZLC3 NextBio:20828097 Uniprot:Q5ZLC3
Length = 338
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 230/319 (72%), Positives = 266/319 (83%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW + NN++ + DEI+KYDRK+QQ+++AAKPW KD H+FK KISALALLKMVMHAR
Sbjct: 15 KTWELANNMQEAQSIDEIYKYDRKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 74
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE AK+VGRL
Sbjct: 75 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 134
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG+FRTYP
Sbjct: 135 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 194
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+L+VSYFK WNKYWVNT
Sbjct: 195 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 254
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVR-NFLIS-ESQERRPETKLMKATKDCCKT 361
TNADY TGQ+ DLS+KLEQ+E+ L R +F++ E+ +++ E KL KAT+D CKT
Sbjct: 255 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDKKSEDKLAKATRDSCKT 314
Query: 362 TIECIHGLMAQMIKQQLFN 380
TIE IHGLM+Q+IK +LFN
Sbjct: 315 TIEAIHGLMSQVIKDKLFN 333
>UNIPROTKB|E2QWE0 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0045944 GO:GO:0008237
GO:GO:0051726 GO:GO:0046328 GO:GO:0008180 GO:GO:0010388 KO:K09613
OMA:SAGKVCL GeneTree:ENSGT00550000074850 CTD:10987
EMBL:AAEX03015841 RefSeq:XP_535093.1 Ensembl:ENSCAFT00000011845
GeneID:477901 KEGG:cfa:477901 NextBio:20853308 Uniprot:E2QWE0
Length = 334
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 230/319 (72%), Positives = 266/319 (83%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW + NN++ + DEI+KYD+K+QQ+++AAKPW KD H+FK KISALALLKMVMHAR
Sbjct: 11 KTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE AK+VGRL
Sbjct: 71 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG+FRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+L+VSYFK WNKYWVNT
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 250
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVR-NFLIS-ESQERRPETKLMKATKDCCKT 361
TNADY TGQ+ DLS+KLEQ+E+ L R +F++ E+ +R+ E KL KAT+D CKT
Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKT 310
Query: 362 TIECIHGLMAQMIKQQLFN 380
TIE IHGLM+Q+IK +LFN
Sbjct: 311 TIEAIHGLMSQVIKDKLFN 329
>UNIPROTKB|Q92905 [details] [associations]
symbol:COPS5 "COP9 signalosome complex subunit 5"
species:9606 "Homo sapiens" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000338 "protein
deneddylation" evidence=IMP] [GO:0008237 "metallopeptidase
activity" evidence=IMP] [GO:0008180 "signalosome" evidence=IDA]
[GO:0010388 "cullin deneddylation" evidence=IDA] [GO:0046328
"regulation of JNK cascade" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003713 "transcription coactivator activity"
evidence=TAS] [GO:0003743 "translation initiation factor activity"
evidence=TAS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0048471 GO:GO:0046872
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0045944 GO:GO:0006508
GO:GO:0008237 GO:GO:0051726 GO:GO:0003713 GO:GO:0006366
GO:GO:0003743 GO:GO:0046328 GO:GO:0008180 eggNOG:COG1310
Pathway_Interaction_DB:hif1apathway GO:GO:0005852 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL MEROPS:M67.002 CTD:10987
HOVERGEN:HBG051137 OrthoDB:EOG41NTMD ChiTaRS:COPS5 EMBL:U65928
EMBL:U70734 EMBL:CR541678 EMBL:BC001187 EMBL:BC001859 EMBL:BC007272
EMBL:BX648542 EMBL:AY078082 IPI:IPI00009958 PIR:S71820
RefSeq:NP_006828.2 UniGene:Hs.491912 ProteinModelPortal:Q92905
DIP:DIP-34546N IntAct:Q92905 MINT:MINT-1188008 STRING:Q92905
PhosphoSite:Q92905 DMDM:55976562 REPRODUCTION-2DPAGE:IPI00009958
PaxDb:Q92905 PRIDE:Q92905 DNASU:10987 Ensembl:ENST00000357849
GeneID:10987 KEGG:hsa:10987 UCSC:uc003xxd.3 GeneCards:GC08M068005
HGNC:HGNC:2240 HPA:CAB004242 HPA:HPA004845 MIM:604850
neXtProt:NX_Q92905 PharmGKB:PA26757 InParanoid:Q92905
GenomeRNAi:10987 NextBio:41743 ArrayExpress:Q92905 Bgee:Q92905
CleanEx:HS_COPS5 Genevestigator:Q92905 GermOnline:ENSG00000121022
Uniprot:Q92905
Length = 334
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 230/319 (72%), Positives = 266/319 (83%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW + NN++ + DEI+KYD+K+QQ+++AAKPW KD H+FK KISALALLKMVMHAR
Sbjct: 11 KTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE AK+VGRL
Sbjct: 71 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG+FRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+L+VSYFK WNKYWVNT
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 250
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVR-NFLIS-ESQERRPETKLMKATKDCCKT 361
TNADY TGQ+ DLS+KLEQ+E+ L R +F++ E+ +R+ E KL KAT+D CKT
Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKT 310
Query: 362 TIECIHGLMAQMIKQQLFN 380
TIE IHGLM+Q+IK +LFN
Sbjct: 311 TIEAIHGLMSQVIKDKLFN 329
>UNIPROTKB|F2Z540 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 GO:GO:0010388 OMA:SAGKVCL
GeneTree:ENSGT00550000074850 EMBL:CU582915 EMBL:JX570667
Ensembl:ENSSSCT00000006798 Uniprot:F2Z540
Length = 334
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 230/319 (72%), Positives = 266/319 (83%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW + NN++ + DEI+KYD+K+QQ+++AAKPW KD H+FK KISALALLKMVMHAR
Sbjct: 11 KTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE AK+VGRL
Sbjct: 71 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG+FRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+L+VSYFK WNKYWVNT
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 250
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVR-NFLIS-ESQERRPETKLMKATKDCCKT 361
TNADY TGQ+ DLS+KLEQ+E+ L R +F++ E+ +R+ E KL KAT+D CKT
Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKT 310
Query: 362 TIECIHGLMAQMIKQQLFN 380
TIE IHGLM+Q+IK +LFN
Sbjct: 311 TIEAIHGLMSQVIKDKLFN 329
>MGI|MGI:1349415 [details] [associations]
symbol:Cops5 "COP9 (constitutive photomorphogenic) homolog,
subunit 5 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000338 "protein deneddylation" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO] [GO:0010388
"cullin deneddylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046328 "regulation of JNK cascade" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1349415 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0045944 GO:GO:0006508 GO:GO:0008237 GO:GO:0005667
GO:GO:0051726 GO:GO:0003713 GO:GO:0046328 GO:GO:0008180
eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000116528 KO:K09613
OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850 CTD:10987
HOVERGEN:HBG051137 OrthoDB:EOG41NTMD EMBL:U70736 EMBL:AF068223
EMBL:AF065386 EMBL:AK012499 EMBL:AK146271 EMBL:AK151492
EMBL:BC046753 IPI:IPI00135087 RefSeq:NP_038743.1 UniGene:Mm.402384
ProteinModelPortal:O35864 STRING:O35864 PhosphoSite:O35864
REPRODUCTION-2DPAGE:O35864 PaxDb:O35864 PRIDE:O35864
Ensembl:ENSMUST00000027050 GeneID:26754 KEGG:mmu:26754
UCSC:uc007ahe.1 InParanoid:O35864 NextBio:304667 Bgee:O35864
Genevestigator:O35864 GermOnline:ENSMUSG00000025917 Uniprot:O35864
Length = 334
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 230/319 (72%), Positives = 266/319 (83%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW + NN++ + DEI+KYD+K+QQ+++AAKPW KD H+FK KISALALLKMVMHAR
Sbjct: 11 KTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE AK+VGRL
Sbjct: 71 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG+FRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+L+VSYFK WNKYWVNT
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 250
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVR-NFLIS-ESQERRPETKLMKATKDCCKT 361
TNADY TGQ+ DLS+KLEQ+E+ L R +F++ E+ +R+ E KL KAT+D CKT
Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKT 310
Query: 362 TIECIHGLMAQMIKQQLFN 380
TIE IHGLM+Q+IK +LFN
Sbjct: 311 TIEAIHGLMSQVIKDKLFN 329
>RGD|1310301 [details] [associations]
symbol:Cops5 "COP9 signalosome subunit 5" species:10116 "Rattus
norvegicus" [GO:0000338 "protein deneddylation" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008237 "metallopeptidase activity" evidence=IEA;ISO]
[GO:0010388 "cullin deneddylation" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0046328 "regulation of JNK cascade"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1310301
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 eggNOG:COG1310 EMBL:CH473984 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL MEROPS:M67.002
GeneTree:ENSGT00550000074850 CTD:10987 HOVERGEN:HBG051137
OrthoDB:EOG41NTMD EMBL:BC098736 IPI:IPI00366535
RefSeq:NP_001020866.1 UniGene:Rn.2243 STRING:Q4KM69
Ensembl:ENSRNOT00000008877 GeneID:312916 KEGG:rno:312916
UCSC:RGD:1310301 InParanoid:Q4KM69 NextBio:665375
Genevestigator:Q4KM69 Uniprot:Q4KM69
Length = 334
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 230/319 (72%), Positives = 266/319 (83%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW + NN++ + DEI+KYD+K+QQ+++AAKPW KD H+FK KISALALLKMVMHAR
Sbjct: 11 KTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE AK+VGRL
Sbjct: 71 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG+FRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+L+VSYFK WNKYWVNT
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 250
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVR-NFLIS-ESQERRPETKLMKATKDCCKT 361
TNADY TGQ+ DLS+KLEQ+E+ L R +F++ E+ +R+ E KL KAT+D CKT
Sbjct: 251 SSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKT 310
Query: 362 TIECIHGLMAQMIKQQLFN 380
TIE IHGLM+Q+IK +LFN
Sbjct: 311 TIEAIHGLMSQVIKDKLFN 329
>ZFIN|ZDB-GENE-040426-1686 [details] [associations]
symbol:cops5 "COP9 constitutive photomorphogenic
homolog subunit 5" species:7955 "Danio rerio" [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-040426-1686 GO:GO:0048471 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0008180 eggNOG:COG1310 HOGENOM:HOG000116528
KO:K09613 OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
EMBL:BC059493 IPI:IPI00500950 RefSeq:NP_957019.1 UniGene:Dr.81074
ProteinModelPortal:Q6PC30 STRING:Q6PC30 PRIDE:Q6PC30
Ensembl:ENSDART00000080332 GeneID:393698 KEGG:dre:393698 CTD:10987
HOVERGEN:HBG051137 InParanoid:Q6PC30 OrthoDB:EOG41NTMD
NextBio:20814701 Bgee:Q6PC30 Uniprot:Q6PC30
Length = 334
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 228/319 (71%), Positives = 267/319 (83%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KTW + N+++ + + DEI+KYD+K+QQ+++AAKPW KD H+FK K+SALALLKMVMHAR
Sbjct: 9 KTWELSNSMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMHAR 68
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE AK+VGRL
Sbjct: 69 SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 128
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG+FRTYP
Sbjct: 129 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 188
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
KGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+L+VSYFK WNKYWVNT
Sbjct: 189 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 248
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVR-NFLIS-ESQERRPETKLMKATKDCCKT 361
TNADY TGQ+ DLS+KLEQAE+ L R +F++ ++ +R+ E KL KAT+D CKT
Sbjct: 249 SSSSLLTNADYTTGQVFDLSEKLEQAEAQLGRGSFMLGLDTHDRKSEDKLAKATRDSCKT 308
Query: 362 TIECIHGLMAQMIKQQLFN 380
TIE IHGLM+Q+IK +LFN
Sbjct: 309 TIEAIHGLMSQVIKDKLFN 327
>DICTYBASE|DDB_G0284597 [details] [associations]
symbol:csn5 "Mov34/MPN/PAD-1 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IEA;ISS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0284597 GO:GO:0005737
GenomeReviews:CM000153_GR GO:GO:0046872 GO:GO:0008283 GO:GO:0006508
GO:GO:0008237 GO:GO:0008180 eggNOG:COG1310 EMBL:AAFI02000069
KO:K09613 OMA:SAGKVCL EMBL:DQ309433 RefSeq:XP_638491.1
ProteinModelPortal:Q54PF3 STRING:Q54PF3 MEROPS:M67.A13 PRIDE:Q54PF3
EnsemblProtists:DDB0233103 GeneID:8624671 KEGG:ddi:DDB_G0284597
ProtClustDB:CLSZ2497175 Uniprot:Q54PF3
Length = 332
Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
Identities = 195/317 (61%), Positives = 248/317 (78%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
KT+ +ENNI+T+ D++FKYD ++ Q + +KPW KDPH+FK +KISA+ALLKMVMHAR
Sbjct: 11 KTFELENNIQTIDH-DQLFKYDPQQYQQFLQSKPWSKDPHYFKHVKISAIALLKMVMHAR 69
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG LEVMG+L+GK++ N+MI+MD+FALPVEGTETRVNAQ +AYEYM Y+E K+ GRL
Sbjct: 70 SGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYMVEYLELIKQTGRL 129
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENA+GWYHSHPGYGCWLSGIDV TQ +NQ + EP++ IVIDP RT+SAGKV +G+FRTYP
Sbjct: 130 ENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVSAGKVEIGAFRTYP 189
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
+GYKP NE PSEYQ+IPL+KIEDFGVHCKQYYSL+++YFK WNKYWVNT
Sbjct: 190 QGYKPPNEGPSEYQSIPLSKIEDFGVHCKQYYSLEITYFKSSLDQQLLDKLWNKYWVNTL 249
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVRNFLISESQERRPETKLMKATKDCCKTTI 363
+N DY+TGQ+ DLS+KLEQAE+ L + S +++ E+ L K +KD K TI
Sbjct: 250 SSSPIFSNRDYITGQINDLSEKLEQAETQLSHS-RSSILDKKKEESLLSKVSKDSSKVTI 308
Query: 364 ECIHGLMAQMIKQQLFN 380
E + G+M+Q+ K +FN
Sbjct: 309 EQVQGIMSQVFKNSIFN 325
>TAIR|locus:2032288 [details] [associations]
symbol:CSN5B "COP9-signalosome 5B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0000338 "protein
deneddylation" evidence=IGI] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010387 "signalosome assembly" evidence=IMP]
[GO:0010971 "positive regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:2000082 "regulation of L-ascorbic acid
biosynthetic process" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0009733 GO:GO:0046872 GO:GO:0006508
GO:GO:0000085 GO:GO:0008237 GO:GO:0009585 GO:GO:0008180
eggNOG:COG1310 GO:GO:0000338 EMBL:AF087412 EMBL:AF395061
EMBL:AC016162 EMBL:AF411778 EMBL:AY124816 IPI:IPI00526805
PIR:H96736 PIR:T52042 RefSeq:NP_177279.1 UniGene:At.17922
UniGene:At.68950 ProteinModelPortal:Q9FVU9 IntAct:Q9FVU9
STRING:Q9FVU9 MEROPS:M67.A02 PRIDE:Q9FVU9 EnsemblPlants:AT1G71230.1
GeneID:843463 KEGG:ath:AT1G71230 TAIR:At1g71230
HOGENOM:HOG000116528 InParanoid:Q9FVU9 KO:K09613 OMA:SAGKVCL
PhylomeDB:Q9FVU9 ProtClustDB:CLSN2681857 Genevestigator:Q9FVU9
GermOnline:AT1G71230 GO:GO:0010100 GO:GO:0010387 Uniprot:Q9FVU9
Length = 358
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 205/334 (61%), Positives = 247/334 (73%)
Query: 56 GCTIIFQNKTWIMENNIETL----SATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKIS 111
G + KTW +EN+I T+ S +D IF YD Q KPWE DPH+FK +KIS
Sbjct: 3 GSSSTIARKTWELENSILTVDSPDSTSDNIFYYDDTSQTRFQQEKPWENDPHYFKRVKIS 62
Query: 112 ALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMT 171
ALALLKMV+HARSGGT+E+MGL+ GK D +++IVMDAFALPVEGTETRVNAQ AYEYM
Sbjct: 63 ALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMV 122
Query: 172 AYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISA 231
Y + K GRLEN +GWYHSHPGYGCWLSGIDVSTQ LNQ QEPF+A+VIDP RT+SA
Sbjct: 123 EYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSA 182
Query: 232 GKVCLGSFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXX 291
GKV +G+FRTY KGYKP +E SEYQTIPLNKIEDFGVHCKQYYSLDV+YFK
Sbjct: 183 GKVEIGAFRTYSKGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYSLDVTYFKSSLDSHLL 242
Query: 292 XXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRN-F--LISES--QERR 346
WNKYWVNT N DY+ GQ+ DL++KLEQAES LV++ F ++ S +++
Sbjct: 243 DLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESHLVQSRFGGVVPSSLHKKKE 302
Query: 347 PETKLMKATKDCCKTTIECIHGLMAQMIKQQLFN 380
E++L K T+D K T+E +HGLM+Q+IK +LFN
Sbjct: 303 DESQLTKITRDSAKITVEQVHGLMSQVIKDELFN 336
>TAIR|locus:2017764 [details] [associations]
symbol:CSN5A "COP9 signalosome 5A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000338 "protein deneddylation"
evidence=TAS] [GO:0010093 "specification of floral organ identity"
evidence=IMP] [GO:0009733 "response to auxin stimulus"
evidence=IGI] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=IGI] [GO:0010387 "signalosome
assembly" evidence=IMP] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0031347
"regulation of defense response" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0009733 GO:GO:0046872 GO:GO:0006508
GO:GO:0000085 GO:GO:0008237 GO:GO:0009585 GO:GO:0010093
GO:GO:0008180 eggNOG:COG1310 GO:GO:0031347 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 ProtClustDB:CLSN2681857
GO:GO:0010100 GO:GO:0010387 EMBL:AF087413 EMBL:AF395062
EMBL:AF042334 EMBL:AF000657 EMBL:AY087510 EMBL:BT003909
IPI:IPI00517251 PIR:C86363 PIR:T52180 RefSeq:NP_173705.1
UniGene:At.10441 ProteinModelPortal:Q8LAZ7 IntAct:Q8LAZ7
STRING:Q8LAZ7 MEROPS:M67.A01 PaxDb:Q8LAZ7 PRIDE:Q8LAZ7
EnsemblPlants:AT1G22920.1 GeneID:838899 KEGG:ath:AT1G22920
GeneFarm:4559 TAIR:At1g22920 InParanoid:Q8LAZ7 OMA:IFHYDDA
PhylomeDB:Q8LAZ7 Genevestigator:Q8LAZ7 Uniprot:Q8LAZ7
Length = 357
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 200/344 (58%), Positives = 248/344 (72%)
Query: 56 GCTIIFQNKTWIMENNI----ETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKIS 111
G + KTW +ENNI T SA+D IF YD Q + KPW DP++FK + IS
Sbjct: 3 GSSSAIARKTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHIS 62
Query: 112 ALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMT 171
ALALLKMV+HARSGGT+E+MGL+ GK + +++IVMDAFALPVEGTETRVNAQ+ AYEYM
Sbjct: 63 ALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMV 122
Query: 172 AYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISA 231
Y + +K GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQ +QEPF+A+VIDP RT+SA
Sbjct: 123 EYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSA 182
Query: 232 GKVCLGSFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXX 291
GKV +G+FRTYP+G+K +++ SEYQTIPLNKIEDFGVHCKQYYSLD++YFK
Sbjct: 183 GKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLL 242
Query: 292 XXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF---LISESQERRPE 348
WNKYWVNT N DY+ GQ+ DL++KLEQAES L + + +RR E
Sbjct: 243 DLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKE 302
Query: 349 TK--LMKATKDCCKTTIECIHGLMAQMIKQQLFNHNMKHVETED 390
+ L K T+D K T+E +HGLM+Q+IK LFN + ++ D
Sbjct: 303 DEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSAD 346
>WB|WBGene00000817 [details] [associations]
symbol:csn-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0008180 "signalosome" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017151 "DEAD/H-box RNA helicase binding" evidence=IPI]
[GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0031672 "A band" evidence=IDA]
[GO:0000338 "protein deneddylation" evidence=IGI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0009792
GO:GO:0040007 GO:GO:0030154 GO:GO:0008406 GO:GO:0002119
GO:GO:0046872 GO:GO:0006508 GO:GO:0048477 GO:GO:0008237
GO:GO:0000910 GO:GO:0040035 GO:GO:0008180 eggNOG:COG1310
GO:GO:0000338 HOGENOM:HOG000116528 KO:K09613 OMA:IFHYDDA
EMBL:FO080232 PIR:T29320 RefSeq:NP_500841.1
ProteinModelPortal:P91001 SMR:P91001 DIP:DIP-26100N IntAct:P91001
MINT:MINT-114117 STRING:P91001 MEROPS:M67.002 PaxDb:P91001
PRIDE:P91001 EnsemblMetazoa:B0547.1.1 EnsemblMetazoa:B0547.1.2
GeneID:177342 KEGG:cel:CELE_B0547.1 UCSC:B0547.1.1 CTD:177342
WormBase:B0547.1 GeneTree:ENSGT00550000074850 InParanoid:P91001
NextBio:896356 GO:GO:0031672 Uniprot:P91001
Length = 368
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 179/316 (56%), Positives = 223/316 (70%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
+ W ENN++ + D IF+Y+ K+Q ++ AKPW+KDPH+FK IKISA+ALLKM MHA+
Sbjct: 15 RNWEKENNVQNV---DSIFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAK 71
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
GG LE+MGLL G+IDANS I++D FALPVEGTETRVNAQAQAYEYMT Y E GR
Sbjct: 72 RGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRK 131
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
E +GWYHSHPGYGCWLSGIDVSTQ LNQ FQEP+VAIVIDP+RT+SAGKV +G+FRTYP
Sbjct: 132 EKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYP 191
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
+GY+P ++ PSEYQ+IPL KIEDFGVHCK+YYSLDVS+FK WN YW++T
Sbjct: 192 EGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLDAHILTSLWNSYWISTL 251
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVRNFLISESQERRPETKLMKATKDCCKTTI 363
+N ++L Q+ D++ KL + L N + E LMK D
Sbjct: 252 SSSPLFSNVEFLNNQIQDINQKLSAVDKKLQLNDRSVDGHEA-----LMKVVTDAKAVGD 306
Query: 364 ECIHGLMAQMIKQQLF 379
E G ++ ++KQ LF
Sbjct: 307 ELETGRISHLVKQLLF 322
>UNIPROTKB|P91001 [details] [associations]
symbol:csn-5 "COP9 signalosome complex subunit 5"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0009792 GO:GO:0040007 GO:GO:0030154 GO:GO:0008406
GO:GO:0002119 GO:GO:0046872 GO:GO:0006508 GO:GO:0048477
GO:GO:0008237 GO:GO:0000910 GO:GO:0040035 GO:GO:0008180
eggNOG:COG1310 GO:GO:0000338 HOGENOM:HOG000116528 KO:K09613
OMA:IFHYDDA EMBL:FO080232 PIR:T29320 RefSeq:NP_500841.1
ProteinModelPortal:P91001 SMR:P91001 DIP:DIP-26100N IntAct:P91001
MINT:MINT-114117 STRING:P91001 MEROPS:M67.002 PaxDb:P91001
PRIDE:P91001 EnsemblMetazoa:B0547.1.1 EnsemblMetazoa:B0547.1.2
GeneID:177342 KEGG:cel:CELE_B0547.1 UCSC:B0547.1.1 CTD:177342
WormBase:B0547.1 GeneTree:ENSGT00550000074850 InParanoid:P91001
NextBio:896356 GO:GO:0031672 Uniprot:P91001
Length = 368
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 179/316 (56%), Positives = 223/316 (70%)
Query: 64 KTWIMENNIETLSATDEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
+ W ENN++ + D IF+Y+ K+Q ++ AKPW+KDPH+FK IKISA+ALLKM MHA+
Sbjct: 15 RNWEKENNVQNV---DSIFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAK 71
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
GG LE+MGLL G+IDANS I++D FALPVEGTETRVNAQAQAYEYMT Y E GR
Sbjct: 72 RGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRK 131
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
E +GWYHSHPGYGCWLSGIDVSTQ LNQ FQEP+VAIVIDP+RT+SAGKV +G+FRTYP
Sbjct: 132 EKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYP 191
Query: 244 KGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTX 303
+GY+P ++ PSEYQ+IPL KIEDFGVHCK+YYSLDVS+FK WN YW++T
Sbjct: 192 EGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLDAHILTSLWNSYWISTL 251
Query: 304 XXXXXXTNADYLTGQMCDLSDKLEQAESALVRNFLISESQERRPETKLMKATKDCCKTTI 363
+N ++L Q+ D++ KL + L N + E LMK D
Sbjct: 252 SSSPLFSNVEFLNNQIQDINQKLSAVDKKLQLNDRSVDGHEA-----LMKVVTDAKAVGD 306
Query: 364 ECIHGLMAQMIKQQLF 379
E G ++ ++KQ LF
Sbjct: 307 ELETGRISHLVKQLLF 322
>ASPGD|ASPL0000041877 [details] [associations]
symbol:csnE species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0008180
"signalosome" evidence=ISS;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=TAS] [GO:0010388 "cullin deneddylation"
evidence=TAS] [GO:0030448 "hyphal growth" evidence=IMP] [GO:0045116
"protein neddylation" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005737 GO:GO:0046872 EMBL:BN001307
GO:GO:0006508 GO:GO:0008237 EMBL:AACD01000032 GO:GO:0008180
eggNOG:COG1310 HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL
EMBL:AY126455 RefSeq:XP_659733.1 ProteinModelPortal:Q5BBF1
STRING:Q5BBF1 EnsemblFungi:CADANIAT00008806 GeneID:2875469
KEGG:ani:AN2129.2 OrthoDB:EOG4HDX37 Uniprot:Q5BBF1
Length = 335
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 164/318 (51%), Positives = 210/318 (66%)
Query: 65 TWIMENNIETLSAT-DEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHAR 123
+W +EN + + D +++YD + + + +PW KDPH+FK ++ISA+ALLKMVMHAR
Sbjct: 7 SWELENAVTLIDPQRDSLYRYDEETHKYLSDTRPWTKDPHYFKSVRISAVALLKMVMHAR 66
Query: 124 SGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRL 183
SGG+LEVMGL+ G I N+ +V DAF LPVEGTETRVNAQ +A EYM +Y+++ +E GR+
Sbjct: 67 SGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDEANEYMVSYLQSCREAGRM 126
Query: 184 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYP 243
ENA+GWYHSHPGYGCWLSGIDVSTQ + Q PFVA+VIDP RTISAGKV +G+FRT+P
Sbjct: 127 ENAVGWYHSHPGYGCWLSGIDVSTQDMQQ-MSGPFVAVVIDPERTISAGKVDIGAFRTFP 185
Query: 244 KGYKPANEEPSE--YQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVN 301
K Y P EE E YQT+PLNK EDFG H YYSL+VS FK WNKYWV
Sbjct: 186 KDYTPPKEEQEEDEYQTVPLNKAEDFGAHASHYYSLEVSLFKSALDTEILSLLWNKYWVA 245
Query: 302 TXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNFLISESQERRPETKLMKATKDCCKT 361
T T DY + QM DLS K + + N + + + +L + KD +
Sbjct: 246 TLSQSPLFTTRDYGSKQMLDLSQKTRRVARGIESNPPRGGAPTQVRDQQLERVVKDGQRI 305
Query: 362 TIECIHGLMAQMIKQQLF 379
E + GL+A +K QLF
Sbjct: 306 VSEEVKGLLAAEVKMQLF 323
>UNIPROTKB|G4N5N6 [details] [associations]
symbol:MGG_05274 "COP9 signalosome complex subunit 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 EMBL:CM001233 KO:K09613 MEROPS:M67.002
RefSeq:XP_003712833.1 ProteinModelPortal:G4N5N6
EnsemblFungi:MGG_05274T0 GeneID:2675301 KEGG:mgr:MGG_05274
Uniprot:G4N5N6
Length = 344
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 144/275 (52%), Positives = 190/275 (69%)
Query: 64 KTWIMENNIETLSAT-DEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHA 122
K+W ++NN++ + + D ++ YD + Q+ + +PW KDP++FK ++ISA+AL+KMVMHA
Sbjct: 6 KSWELDNNVKLVDPSRDALYNYDAESQKAINQQRPWAKDPNYFKSVRISAIALIKMVMHA 65
Query: 123 RSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGR 182
RSGG+LEVMG++ G +D +++V DAF LPVEGTETRVNA +A EY+ Y+ ++E GR
Sbjct: 66 RSGGSLEVMGMMQGYVDGTALVVTDAFRLPVEGTETRVNAHDEANEYLVEYLRLSREQGR 125
Query: 183 LENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTY 242
LEN +GWYHSHPGYGCWLSGIDVSTQ L Q F +PFVA+VIDP RTISAGKV +G+FRTY
Sbjct: 126 LENVVGWYHSHPGYGCWLSGIDVSTQFLQQQFMDPFVAVVIDPDRTISAGKVEIGAFRTY 185
Query: 243 PKGYKPANEEPSE-YQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVN 301
P+ YK S+ YQ +PL K EDFG H +YY+L+ +FK WNKYWV
Sbjct: 186 PENYKAEEASTSDGYQPVPLAKAEDFGAHASRYYALETEHFKSTLDAHLLELLWNKYWVQ 245
Query: 302 TXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRN 336
T TN DY QM DL ++ + RN
Sbjct: 246 TLSQSPLITNRDYGNKQMLDLGSRIRDVVGVMQRN 280
>UNIPROTKB|E5RHF2 [details] [associations]
symbol:COPS5 "COP9 signalosome complex subunit 5"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0051726
GO:GO:0008180 ChiTaRS:COPS5 HGNC:HGNC:2240 EMBL:AC109335
EMBL:AC110998 IPI:IPI00985306 ProteinModelPortal:E5RHF2 SMR:E5RHF2
Ensembl:ENST00000518747 ArrayExpress:E5RHF2 Bgee:E5RHF2
Uniprot:E5RHF2
Length = 151
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 131/151 (86%), Positives = 140/151 (92%)
Query: 118 MVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAA 177
MVMHARSGG LEVMGL+LGK+D +MI+MD+FALPVEGTETRVNAQA AYEYM AYIE A
Sbjct: 1 MVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 60
Query: 178 KEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLG 237
K+VGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV LG
Sbjct: 61 KQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLG 120
Query: 238 SFRTYPKGYKPANEEPSEYQTIPLNKIEDFG 268
+FRTYPKGYKP +E PSEYQTIPLNKIEDFG
Sbjct: 121 AFRTYPKGYKPPDEGPSEYQTIPLNKIEDFG 151
>POMBASE|SPAC1687.13c [details] [associations]
symbol:csn5 "COP9/signalosome complex subunit Csn5"
species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008180 "signalosome"
evidence=IDA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IGI] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPAC1687.13c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
GO:GO:0008180 eggNOG:COG1310 GO:GO:0004843 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:IFHYDDA MEROPS:M67.002
OrthoDB:EOG4HDX37 PIR:T37756 RefSeq:NP_593131.1
ProteinModelPortal:O94454 STRING:O94454 EnsemblFungi:SPAC1687.13c.1
GeneID:2541529 KEGG:spo:SPAC1687.13c NextBio:20802626
Uniprot:O94454
Length = 299
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 110/243 (45%), Positives = 153/243 (62%)
Query: 79 DEIFKYDRKRQQDMIAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKI 138
+ +F++D ++++ I PW+ DP FF+ +KISA+ALLKM+ H G LEVMG + GK+
Sbjct: 6 ENVFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVMGYVQGKV 65
Query: 139 DANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGC 198
+ S+I++D+FALPVEGTETRVNA +A EY Y K V R EN IGWYHSHP YGC
Sbjct: 66 EGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGC 125
Query: 199 WLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKVCLGSFRTYPKGYK-----PANEEP 253
WLSG+DV TQ NQ +Q+PFVA+V+DP R++ + V +G+FRTYP G + P
Sbjct: 126 WLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGNDGSIRTKSRHHP 185
Query: 254 SE-YQTIPLNKIEDFGVHCKQYYSLDVSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNA 312
S ++ +P +KIED G H + YYSL ++YF N+ W + N
Sbjct: 186 SVLFKNLPSSKIEDAGAHAEAYYSLPITYFHSKAEKKVTEFLRNRNWSRSITECSILQNN 245
Query: 313 DYL 315
++L
Sbjct: 246 EFL 248
>DICTYBASE|DDB_G0272566 [details] [associations]
symbol:psmD14 "putative multidrug resistance protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0272566 GO:GO:0045335
GO:GO:0046872 GenomeReviews:CM000151_GR GO:GO:0008237 GO:GO:0004175
EMBL:AAFI02000008 GO:GO:0000502 GO:GO:0006511 eggNOG:COG1310
MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012 KO:K03030
OMA:MVLGQEP EMBL:U96916 RefSeq:XP_644863.1
ProteinModelPortal:Q86IJ1 STRING:Q86IJ1 EnsemblProtists:DDB0191298
GeneID:8618542 KEGG:ddi:DDB_G0272566 ProtClustDB:CLSZ2438686
Uniprot:Q86IJ1
Length = 306
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 97/286 (33%), Positives = 146/286 (51%)
Query: 102 PHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRV 160
P + I IS+LALLKM+ HAR+G LEVMGL+LG+ ID ++ V+D FA+P GT V
Sbjct: 25 PDTAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIRVIDVFAMPQSGTSVSV 84
Query: 161 NAQAQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVA 220
A ++ T ++ K+ GR E IGWYHSHPG+GCWLS +DV+TQ + Q VA
Sbjct: 85 EAIDPVFQ--TKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVNTQQSFEQLQSRAVA 142
Query: 221 IVIDPVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHC------KQY 274
+V+DP++++ GKV + +FRT P EP + T L ++D + + Y
Sbjct: 143 VVVDPLQSVR-GKVVIDAFRTIKTS--PT-AEPRQI-TSNLGHLQDPSIQALIHGLNRNY 197
Query: 275 YSLDVSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALV 334
YS+ ++Y K K W T+ Q+ +L + +Q + +
Sbjct: 198 YSIAINYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQINNLLELTKQYQKS-- 255
Query: 335 RNFLISESQERRPETKLMKATK--DCCKTTIECIHGLMAQMIKQQL 378
I + + PE K + A D + I +H LMA + + L
Sbjct: 256 ----IQDEDKIEPEKKEVSAVGKLDPKRHLISDVHTLMANNVVRVL 297
>SGD|S000002375 [details] [associations]
symbol:RRI1 "Catalytic subunit of the COP9 signalosome (CSN)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0010388
"cullin deneddylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IEA;IDA] [GO:0000754 "adaptation of signaling pathway by
response to pheromone involved in conjugation with cellular fusion"
evidence=IMP] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IMP] [GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 SGD:S000002375
GO:GO:0005737 GO:GO:0046872 GO:GO:0006508 EMBL:BK006938
GO:GO:0004222 EMBL:X99000 GO:GO:0008180 eggNOG:COG1310
GO:GO:0000754 GO:GO:0010388 KO:K09613 MEROPS:M67.002
GeneTree:ENSGT00550000074850 OrthoDB:EOG4HDX37 EMBL:Z74264
PIR:S67775 RefSeq:NP_010065.2 ProteinModelPortal:Q12468
DIP:DIP-1809N IntAct:Q12468 MINT:MINT-411234 STRING:Q12468
EnsemblFungi:YDL216C GeneID:851310 KEGG:sce:YDL216C
HOGENOM:HOG000112018 OMA:YYELETI NextBio:968331
Genevestigator:Q12468 GermOnline:YDL216C Uniprot:Q12468
Length = 440
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 71/163 (43%), Positives = 104/163 (63%)
Query: 105 FKDIKISALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS L+ K+ +A GG +E+MG+L+G ++++VMD F LPV GTETRVNAQ
Sbjct: 68 YTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQL 127
Query: 165 QAYEYMTAYIEA---------AKEV-GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNF 214
++YEYM YI+ ++ G N +GW+HSHPGY CWLS ID+ TQ LNQ F
Sbjct: 128 ESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRF 187
Query: 215 QEPFVAIVIDPVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQ 257
Q+P+VAIV+DP++++ + +G+FRT + N S Y+
Sbjct: 188 QDPYVAIVVDPLKSLEDKILRMGAFRTI-ESKSDDNSATSYYE 229
>ZFIN|ZDB-GENE-070410-56 [details] [associations]
symbol:psmd14 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 14" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 ZFIN:ZDB-GENE-070410-56 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CR450841
IPI:IPI00800873 PRIDE:F1QHE5 Ensembl:ENSDART00000091901 Bgee:F1QHE5
Uniprot:F1QHE5
Length = 310
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 92/284 (32%), Positives = 146/284 (51%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR EP + + LNK I+ +H + YYS+
Sbjct: 147 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIT 204
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF- 337
++Y K K W+ T DY + C L++ + + L +N+
Sbjct: 205 INYRKNELEQKMLLNLHKKSWME------GLTLQDY--SEHCKLNETIVKEMLELAKNYN 256
Query: 338 -LISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E + PE +K +D + E + LM I Q L
Sbjct: 257 KAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
>UNIPROTKB|E1C6N0 [details] [associations]
symbol:PSMD14 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0061133 "endopeptidase activator activity"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0070628 "proteasome binding"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:AADN02058674
IPI:IPI00604055 Ensembl:ENSGALT00000018142 ArrayExpress:E1C6N0
Uniprot:E1C6N0
Length = 300
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 92/284 (32%), Positives = 146/284 (51%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 19 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 78
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 79 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 136
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR EP + + LNK I+ +H + YYS+
Sbjct: 137 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIT 194
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF- 337
++Y K K W+ T DY + C L++ + + L +N+
Sbjct: 195 INYRKNELEQKMLLNLHKKSWME------GLTLQDY--SEHCKLNETVVKEMLELAKNYN 246
Query: 338 -LISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E + PE +K +D + E + LM I Q L
Sbjct: 247 KAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 290
>TAIR|locus:2171696 [details] [associations]
symbol:AT5G23540 "AT5G23540" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA;TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005829 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0009651
GO:GO:0006508 GO:GO:0008237 GO:GO:0030163 GO:GO:0000502
eggNOG:COG1310 MEROPS:M67.001 EMBL:AB025633 InterPro:IPR024969
Pfam:PF13012 EMBL:AY230843 EMBL:AY230844 EMBL:AY230845
EMBL:AY070073 EMBL:AY091329 EMBL:AY086277 IPI:IPI00538427
RefSeq:NP_197745.1 UniGene:At.22926 ProteinModelPortal:Q9LT08
SMR:Q9LT08 IntAct:Q9LT08 STRING:Q9LT08 PaxDb:Q9LT08 PRIDE:Q9LT08
DNASU:832420 EnsemblPlants:AT5G23540.1 GeneID:832420
KEGG:ath:AT5G23540 TAIR:At5g23540 HOGENOM:HOG000183690
InParanoid:Q9LT08 KO:K03030 OMA:MVLGQEP PhylomeDB:Q9LT08
ProtClustDB:CLSN2686290 Genevestigator:Q9LT08 GermOnline:AT5G23540
Uniprot:Q9LT08
Length = 308
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 91/282 (32%), Positives = 147/282 (52%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V+ +A
Sbjct: 28 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTG--VSVEA 85
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
+ + T ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + + VA+V+D
Sbjct: 86 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 145
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR+ +EP + + LNK I+ +H + YYS+
Sbjct: 146 PIQSVK-GKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIA 203
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNFL 338
++Y K K W + T++ T + + + L A N
Sbjct: 204 INYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSK--TNEQT-VQEMLSLAAKY---NKA 257
Query: 339 ISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E E PE + +D K E + LM+ I Q L
Sbjct: 258 VQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTL 299
>UNIPROTKB|Q17QP9 [details] [associations]
symbol:PSMD14 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 14" species:9913 "Bos taurus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IDA] [GO:0070628 "proteasome
binding" evidence=IDA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0061133 "endopeptidase
activator activity" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000502 GO:GO:0061133
GO:GO:0070628 eggNOG:COG1310 MEROPS:M67.001 GO:GO:0004221
GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742 OrthoDB:EOG4R23V7
EMBL:DAAA02004429 EMBL:DAAA02004430 EMBL:BC118241 IPI:IPI00689118
RefSeq:NP_001069535.1 UniGene:Bt.31257 SMR:Q17QP9 STRING:Q17QP9
Ensembl:ENSBTAT00000046166 GeneID:535683 KEGG:bta:535683
InParanoid:Q17QP9 NextBio:20876811 Uniprot:Q17QP9
Length = 310
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 91/284 (32%), Positives = 145/284 (51%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR EP + + LNK I+ +H + YYS+
Sbjct: 147 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIT 204
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF- 337
++Y K K W+ T DY + C ++ + + L +N+
Sbjct: 205 INYRKNELEQKMLLNLHKKSWME------GLTLQDY--SEHCKHNESVVKEMLELAKNYN 256
Query: 338 -LISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E + PE +K +D + E + LM I Q L
Sbjct: 257 KAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
>UNIPROTKB|O00487 [details] [associations]
symbol:PSMD14 "26S proteasome non-ATPase regulatory subunit
14" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP;TAS]
[GO:0008237 "metallopeptidase activity" evidence=TAS] [GO:0070536
"protein K63-linked deubiquitination" evidence=IMP;TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0061133 "endopeptidase activator activity" evidence=IMP]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IMP] [GO:0070628 "proteasome binding" evidence=IDA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IMP] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0010950 "positive regulation of endopeptidase
activity" evidence=IMP] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0046872 GO:GO:0000082 GO:GO:0008237 EMBL:CH471058
GO:GO:0051436 GO:GO:0000724 GO:GO:0061133 GO:GO:0070628
GO:GO:0008541 GO:GO:0000216 GO:GO:0000209 eggNOG:COG1310
GO:GO:0070536 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
GO:GO:0006303 MEROPS:M67.001 GO:GO:0004221 GO:GO:0006521
GO:GO:0061136 Reactome:REACT_383 InterPro:IPR024969 Pfam:PF13012
HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP EMBL:U86782
EMBL:AK055128 EMBL:BC066336 IPI:IPI00024821 RefSeq:NP_005796.1
UniGene:Hs.740477 ProteinModelPortal:O00487 SMR:O00487
IntAct:O00487 STRING:O00487 PhosphoSite:O00487 OGP:O00487
REPRODUCTION-2DPAGE:IPI00024821 PaxDb:O00487 PeptideAtlas:O00487
PRIDE:O00487 Ensembl:ENST00000409682 GeneID:10213 KEGG:hsa:10213
UCSC:uc002ubu.2 CTD:10213 GeneCards:GC02P162164 HGNC:HGNC:16889
HPA:HPA002114 MIM:607173 neXtProt:NX_O00487 PharmGKB:PA134957776
HOVERGEN:HBG053742 InParanoid:O00487 OrthoDB:EOG4R23V7
BindingDB:O00487 ChEMBL:CHEMBL2007629 GenomeRNAi:10213
NextBio:38668 ArrayExpress:O00487 Bgee:O00487 CleanEx:HS_PSMD14
Genevestigator:O00487 GermOnline:ENSG00000115233 Uniprot:O00487
Length = 310
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 91/284 (32%), Positives = 145/284 (51%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR EP + + LNK I+ +H + YYS+
Sbjct: 147 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIT 204
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF- 337
++Y K K W+ T DY + C ++ + + L +N+
Sbjct: 205 INYRKNELEQKMLLNLHKKSWME------GLTLQDY--SEHCKHNESVVKEMLELAKNYN 256
Query: 338 -LISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E + PE +K +D + E + LM I Q L
Sbjct: 257 KAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
>UNIPROTKB|F1RPQ3 [details] [associations]
symbol:PSMD14 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070628 "proteasome binding" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0061133
GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CU571357
Ensembl:ENSSSCT00000017304 Uniprot:F1RPQ3
Length = 310
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 91/284 (32%), Positives = 145/284 (51%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR EP + + LNK I+ +H + YYS+
Sbjct: 147 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIT 204
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF- 337
++Y K K W+ T DY + C ++ + + L +N+
Sbjct: 205 INYRKNELEQKMLLNLHKKSWME------GLTLQDY--SEHCKHNESVVKEMLELAKNYN 256
Query: 338 -LISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E + PE +K +D + E + LM I Q L
Sbjct: 257 KAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
>MGI|MGI:1913284 [details] [associations]
symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=ISO] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
"positive regulation of endopeptidase activity" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0061133 "endopeptidase activator
activity" evidence=ISO] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO] [GO:0070628 "proteasome
binding" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1913284 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0004175 GO:GO:0000724 GO:GO:0061133
GO:GO:0008541 eggNOG:COG1310 GO:GO:0070536 GO:GO:0006303
MEROPS:M67.001 GO:GO:0004221 GO:GO:0061136 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742
OrthoDB:EOG4R23V7 EMBL:Y13071 EMBL:AK012013 EMBL:AK151104
EMBL:AK151733 EMBL:BC003742 IPI:IPI00113262 RefSeq:NP_067501.2
UniGene:Mm.218198 ProteinModelPortal:O35593 SMR:O35593
IntAct:O35593 MINT:MINT-4049993 STRING:O35593 PhosphoSite:O35593
REPRODUCTION-2DPAGE:O35593 PaxDb:O35593 PRIDE:O35593
Ensembl:ENSMUST00000028278 GeneID:59029 KEGG:mmu:59029
InParanoid:O35593 BindingDB:O35593 ChiTaRS:PSMD14 NextBio:314614
Bgee:O35593 Genevestigator:O35593 GermOnline:ENSMUSG00000026914
Uniprot:O35593
Length = 310
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 91/284 (32%), Positives = 145/284 (51%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR EP + + LNK I+ +H + YYS+
Sbjct: 147 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIT 204
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF- 337
++Y K K W+ T DY + C ++ + + L +N+
Sbjct: 205 INYRKNELEQKMLLNLHKKSWME------GLTLQDY--SEHCKHNESVVKEMLELAKNYN 256
Query: 338 -LISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E + PE +K +D + E + LM I Q L
Sbjct: 257 KAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
>RGD|1594532 [details] [associations]
symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14" species:10116 "Rattus norvegicus" [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
"positive regulation of endopeptidase activity" evidence=ISO]
[GO:0022624 "proteasome accessory complex" evidence=ISO]
[GO:0061133 "endopeptidase activator activity" evidence=ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=ISO] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISO] [GO:0070628 "proteasome binding" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
GO:GO:0000502 GO:GO:0061133 eggNOG:COG1310 MEROPS:M67.001
EMBL:CH473949 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
HOGENOM:HOG000183690 KO:K03030 CTD:10213 HOVERGEN:HBG053742
OrthoDB:EOG4R23V7 IPI:IPI00372125 EMBL:BC097427 EMBL:BC158645
RefSeq:NP_001020860.1 UniGene:Rn.161794 SMR:Q4V8E2 IntAct:Q4V8E2
STRING:Q4V8E2 GeneID:311078 KEGG:rno:311078 UCSC:RGD:1594532
InParanoid:Q4V8E2 NextBio:662956 Genevestigator:Q4V8E2
Uniprot:Q4V8E2
Length = 310
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 91/284 (32%), Positives = 145/284 (51%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR EP + + LNK I+ +H + YYS+
Sbjct: 147 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIT 204
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF- 337
++Y K K W+ T DY + C ++ + + L +N+
Sbjct: 205 INYRKNELEQKMLLNLHKKSWME------GLTLQDY--SEHCKHNESVVKEMLELAKNYN 256
Query: 338 -LISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E + PE +K +D + E + LM I Q L
Sbjct: 257 KAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
>UNIPROTKB|F1LMW6 [details] [associations]
symbol:Psmd14 "Protein Psmd14" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA] [GO:0070628 "proteasome binding" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 IPI:IPI00372125
Ensembl:ENSRNOT00000006605 ArrayExpress:F1LMW6 Uniprot:F1LMW6
Length = 294
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 91/284 (32%), Positives = 145/284 (51%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 13 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 72
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 73 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 130
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLD 278
P++++ GKV + +FR EP + + LNK I+ +H + YYS+
Sbjct: 131 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIT 188
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNF- 337
++Y K K W+ T DY + C ++ + + L +N+
Sbjct: 189 INYRKNELEQKMLLNLHKKSWME------GLTLQDY--SEHCKHNESVVKEMLELAKNYN 240
Query: 338 -LISESQERRPETKLMK--ATKDCCKTTIECIHGLMAQMIKQQL 378
+ E + PE +K +D + E + LM I Q L
Sbjct: 241 KAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 284
>FB|FBgn0028694 [details] [associations]
symbol:Rpn11 "Regulatory particle non-ATPase 11" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IMP;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005875 EMBL:AE014134 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0004175 GO:GO:0008541
GO:GO:0032436 GO:GO:0009987 eggNOG:COG1310 MEROPS:M67.001
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
KO:K03030 OMA:MVLGQEP EMBL:AF145313 EMBL:AY070977 EMBL:AF195189
RefSeq:NP_608905.1 UniGene:Dm.3343 ProteinModelPortal:Q9V3H2
SMR:Q9V3H2 IntAct:Q9V3H2 MINT:MINT-819727 STRING:Q9V3H2
PaxDb:Q9V3H2 PRIDE:Q9V3H2 EnsemblMetazoa:FBtr0079027 GeneID:33738
KEGG:dme:Dmel_CG18174 CTD:33738 FlyBase:FBgn0028694
InParanoid:Q9V3H2 OrthoDB:EOG4SQVC9 PhylomeDB:Q9V3H2
GenomeRNAi:33738 NextBio:785010 Bgee:Q9V3H2 GermOnline:CG18174
Uniprot:Q9V3H2
Length = 308
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 84/257 (32%), Positives = 135/257 (52%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVD 86
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 87 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 144
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHC------KQYYSLD 278
P++++ GKV + +FR +EP + T L ++ V + YYS+
Sbjct: 145 PIQSVK-GKVVIDAFRLINPNMLVLGQEPRQ-TTSNLGHLQKPSVQALIHGLNRHYYSIS 202
Query: 279 VSYFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNFL 338
++Y K K W + T +DY + C +++ L +N+
Sbjct: 203 INYRKNELEQKMLLNLHKKSWKD------GLTLSDY--NEHCSINEDTVAEMLDLAKNYN 254
Query: 339 IS-ESQERR-PETKLMK 353
S E +E+ PE +K
Sbjct: 255 KSLEDEEKMTPEQLAIK 271
>WB|WBGene00018135 [details] [associations]
symbol:F37A4.5 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000003 eggNOG:COG1310
EMBL:FO081312 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
PIR:S44642 RefSeq:NP_498470.1 UniGene:Cel.10529
ProteinModelPortal:P41883 SMR:P41883 IntAct:P41883 STRING:P41883
MEROPS:M67.A10 PaxDb:P41883 PRIDE:P41883 EnsemblMetazoa:F37A4.5.1
EnsemblMetazoa:F37A4.5.2 GeneID:185404 KEGG:cel:CELE_F37A4.5
UCSC:F37A4.5 CTD:185404 WormBase:F37A4.5 InParanoid:P41883
OMA:KMLRHAR NextBio:928158 Uniprot:P41883
Length = 319
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 80/194 (41%), Positives = 116/194 (59%)
Query: 102 PHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRV 160
P + + IS+LALLKM+ HARSG LEVMGL+LG +D ++ V D FA+P GT V
Sbjct: 23 PDTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTV 82
Query: 161 NAQAQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVA 220
+ Y+ T +++ K VGR EN +GWYHSHPG+GCWLS +DV+TQ + VA
Sbjct: 83 ESVDPVYQ--TKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVA 140
Query: 221 IVIDPVRTISAGKVCLGSFRTY-PKGY--KPA--NEEPSE------YQTIP--LNKIEDF 267
+V+DP++++ GKV L +FR+ P +P EP + + T P ++ +
Sbjct: 141 VVVDPIQSVK-GKVMLDAFRSVNPLNLQIRPLAPTAEPRQTTSNLGHLTKPSLISVVHGL 199
Query: 268 GVHCKQYYSLDVSY 281
G +YYSL+V+Y
Sbjct: 200 GT---KYYSLNVAY 210
>WB|WBGene00004467 [details] [associations]
symbol:rpn-11 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0006508 GO:GO:0040011 GO:GO:0008237 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
InParanoid:O76577 NextBio:880901 Uniprot:O76577
Length = 312
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 69/181 (38%), Positives = 110/181 (60%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQAQA 166
+ IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPV 92
Query: 167 YEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPV 226
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + + VA+V+DP+
Sbjct: 93 FQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPI 150
Query: 227 RTISAGKVCLGSFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHC------KQYYSLDVS 280
+++ GKV + +FRT N+EP + T L ++ + + YYS+ ++
Sbjct: 151 QSVK-GKVVIDAFRTINPQSMALNQEPRQ-TTSNLGHLQKPSIQALIHGLNRHYYSIPIA 208
Query: 281 Y 281
Y
Sbjct: 209 Y 209
>UNIPROTKB|O76577 [details] [associations]
symbol:rpn-11 "26S proteasome non-ATPase regulatory subunit
14" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0046872 GO:GO:0006508 GO:GO:0040011
GO:GO:0008237 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 GO:GO:0005838 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
InParanoid:O76577 NextBio:880901 Uniprot:O76577
Length = 312
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 69/181 (38%), Positives = 110/181 (60%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQAQA 166
+ IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPV 92
Query: 167 YEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPV 226
++ ++ K+ GR E +GWYHSHPG+GCWLSG+D++TQ + + VA+V+DP+
Sbjct: 93 FQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPI 150
Query: 227 RTISAGKVCLGSFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHC------KQYYSLDVS 280
+++ GKV + +FRT N+EP + T L ++ + + YYS+ ++
Sbjct: 151 QSVK-GKVVIDAFRTINPQSMALNQEPRQ-TTSNLGHLQKPSIQALIHGLNRHYYSIPIA 208
Query: 281 Y 281
Y
Sbjct: 209 Y 209
>CGD|CAL0003932 [details] [associations]
symbol:orf19.7264 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0000266 "mitochondrial fission"
evidence=IEA] [GO:0016559 "peroxisome fission" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 CGD:CAL0003932
eggNOG:COG1310 MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012
EMBL:AACQ01000092 HOGENOM:HOG000183690 KO:K03030 RefSeq:XP_715061.1
ProteinModelPortal:Q59ZS7 STRING:Q59ZS7 GeneID:3643326
KEGG:cal:CaO19.7264 Uniprot:Q59ZS7
Length = 312
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 76/199 (38%), Positives = 113/199 (56%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQAQA 166
+ IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V D FA+P GT V A
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDFTIHVHDVFAMPQSGTGVSVEAVDDV 92
Query: 167 YEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPV 226
++ T ++ ++ GR + +GWYHSHPG+GCWLS +DV+TQ + + VA+VIDP+
Sbjct: 93 FQ--TKMMDMLRQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQQSFEQLNKRAVAVVIDPI 150
Query: 227 RTISAGKVCLGSFRTYPKGYKPANEEP--SEYQTIPLNK--IEDFGVHC--KQYYSLDVS 280
+++ GKV + +FRT +EP S LNK I+ +H + YYSL++
Sbjct: 151 QSVK-GKVVIDAFRTIDTTTLMMGQEPRQSTSNVGHLNKPSIQAL-IHGLNRHYYSLNID 208
Query: 281 YFKXXXXXXXXXXXWNKYW 299
Y K K W
Sbjct: 209 YHKTEYETNMLLNLHKKNW 227
>SGD|S000001900 [details] [associations]
symbol:RPN11 "Metalloprotease subunit of the 19S regulatory
particle of the 26S pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016559 "peroxisome fission" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IMP] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=IGI;IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0000266
"mitochondrial fission" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 SGD:S000001900 GO:GO:0005739
GO:GO:0005634 GO:GO:0043161 EMBL:D50617 EMBL:BK006940 GO:GO:0008237
GO:GO:0016559 GO:GO:0008541 eggNOG:COG1310 MEROPS:M67.001
GO:GO:0004843 GO:GO:0016579 GO:GO:0000266 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
OrthoDB:EOG40CMRT EMBL:X79561 EMBL:AY152546 EMBL:AY692755
PIR:S56259 RefSeq:NP_116659.1 ProteinModelPortal:P43588 SMR:P43588
DIP:DIP-1573N IntAct:P43588 MINT:MINT-405184 STRING:P43588
PaxDb:P43588 PeptideAtlas:P43588 PRIDE:P43588 EnsemblFungi:YFR004W
GeneID:850554 KEGG:sce:YFR004W CYGD:YFR004w NextBio:966339
Genevestigator:P43588 GermOnline:YFR004W Uniprot:P43588
Length = 306
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 73/198 (36%), Positives = 111/198 (56%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQAQA 166
+ IS++ALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 27 VYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDV 86
Query: 167 YEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPV 226
++ ++ K+ GR + +GWYHSHPG+GCWLS +DV+TQ + VA+V+DP+
Sbjct: 87 FQ--AKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPI 144
Query: 227 RTISAGKVCLGSFRTYPKGYKPANEEPSEY--QTIPLNKIEDFG-VHC--KQYYSLDVSY 281
+++ GKV + +FR G N EP + T LNK +H + YYSL++ Y
Sbjct: 145 QSVK-GKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDY 203
Query: 282 FKXXXXXXXXXXXWNKYW 299
K + W
Sbjct: 204 HKTAKETKMLMNLHKEQW 221
>ASPGD|ASPL0000076795 [details] [associations]
symbol:AN4492 species:162425 "Emericella nidulans"
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0000266
"mitochondrial fission" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034399 "nuclear
periphery" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0000502
EMBL:BN001303 InterPro:IPR024969 Pfam:PF13012
EnsemblFungi:CADANIAT00005953 OMA:GHAGADQ Uniprot:C8V8E2
Length = 338
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 86/263 (32%), Positives = 135/263 (51%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQAQA 166
+ IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V D FA+P GT V A
Sbjct: 35 VHISSLALLKMLRHGRAGVPMEVMGLMLGEFVDEYTVRVTDVFAMPQSGTGVSVEAVDPV 94
Query: 167 YEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPV 226
++ T ++ ++ GR E +GWYHSHPG+GCWLS +D++TQ + VA+V+DP+
Sbjct: 95 FQ--TKMMDMLRQTGRPEPVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPI 152
Query: 227 RTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNK--IEDFGVHC--KQYYSLDVS 280
+++ GKV + +FR +EP + + LNK I+ +H + YYS+ ++
Sbjct: 153 QSVK-GKVVIDAFRLIQPQTVVMGQEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIGIN 210
Query: 281 YFKXXXXXXXXXXXWNKYWVNTXXXXXXXTNADYLTGQMCDLSDKLEQAESALVRNFLIS 340
Y K + W QM D D+ + + + ++
Sbjct: 211 YRKTGLEENMLMNLHKQVWTEAL--------------QMNDFHDECQHNVDRMKQLVNLA 256
Query: 341 ESQERR--PETKLMKATKDCCKT 361
E E+R ET+L TKD KT
Sbjct: 257 EGYEKRVKEETEL---TKDQLKT 276
>GENEDB_PFALCIPARUM|MAL13P1.343 [details] [associations]
symbol:MAL13P1.343 "proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 72/203 (35%), Positives = 108/203 (53%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGKI-DANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS LALLK++ H R+G +EVMGL+LG+I D ++ ++D FA+P G V A
Sbjct: 31 EQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVSVEAVD 90
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
Y+ T +E K+ GR E +GWYHSHPG+GCWLSG DV+TQ + + +V+D
Sbjct: 91 PVYQ--TNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGVVVD 148
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSE------YQTIPLNKIEDFGVHCKQYYSLD 278
P++++ GKV + FR +EP + Y T P G++ + YYS+
Sbjct: 149 PIQSVK-GKVVIDCFRLINPHILMLGQEPRQTTSNIGYLTKPTLTALVHGLN-RNYYSIV 206
Query: 279 VSYFKXXXXXXXXXXXWNKYWVN 301
++Y K W N
Sbjct: 207 INYRKNELEKNMLLNLHKDMWTN 229
>UNIPROTKB|Q8ID28 [details] [associations]
symbol:MAL13P1.343 "Proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 72/203 (35%), Positives = 108/203 (53%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGKI-DANSMIVMDAFALPVEGTETRVNAQA 164
+ + IS LALLK++ H R+G +EVMGL+LG+I D ++ ++D FA+P G V A
Sbjct: 31 EQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVSVEAVD 90
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
Y+ T +E K+ GR E +GWYHSHPG+GCWLSG DV+TQ + + +V+D
Sbjct: 91 PVYQ--TNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGVVVD 148
Query: 225 PVRTISAGKVCLGSFRTYPKGYKPANEEPSE------YQTIPLNKIEDFGVHCKQYYSLD 278
P++++ GKV + FR +EP + Y T P G++ + YYS+
Sbjct: 149 PIQSVK-GKVVIDCFRLINPHILMLGQEPRQTTSNIGYLTKPTLTALVHGLN-RNYYSIV 206
Query: 279 VSYFKXXXXXXXXXXXWNKYWVN 301
++Y K W N
Sbjct: 207 INYRKNELEKNMLLNLHKDMWTN 229
>POMBASE|SPAC31G5.13 [details] [associations]
symbol:rpn11 "19S proteasome regulatory subunit Rpn11"
species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
complex" evidence=IDA;IPI] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0033554
"cellular response to stress" evidence=IMP] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IC] [GO:0046898 "response to
cycloheximide" evidence=IEA] [GO:0071947 "protein deubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
PomBase:SPAC31G5.13 GO:GO:0007346 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0046677 GO:GO:0035690
GO:GO:0000502 eggNOG:COG1310 GO:GO:0071313 GO:GO:0097237
GO:GO:0034399 MEROPS:M67.001 GO:GO:0004843 GO:GO:0046898
InterPro:IPR024969 Pfam:PF13012 EMBL:D84656 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:D31731 EMBL:D45047 PIR:T43293 PIR:T44427
RefSeq:NP_594014.1 ProteinModelPortal:P41878 IntAct:P41878
STRING:P41878 PRIDE:P41878 EnsemblFungi:SPAC31G5.13.1
GeneID:2543040 KEGG:spo:SPAC31G5.13 OrthoDB:EOG40CMRT
NextBio:20804070 GO:GO:0071947 Uniprot:P41878
Length = 308
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 69/183 (37%), Positives = 105/183 (57%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRVNAQAQA 166
+ IS+LALLKM+ H R G +EVMGL+LG+ +D ++ V+D FA+P GT V A
Sbjct: 30 VYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPV 89
Query: 167 YEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPV 226
++ ++ K+ GR E +GWYHSHPG+GCWLS +D++TQ + VA+V+DP+
Sbjct: 90 FQ--KNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPI 147
Query: 227 RTISAGKVCLGSFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHC------KQYYSLDVS 280
+++ GKV + +FR +EP + T L I + + YYSL ++
Sbjct: 148 QSVK-GKVVIDAFRLINPSTLMMGQEPRQ-TTSNLGHINKPSIQALIHGLGRHYYSLRIN 205
Query: 281 YFK 283
Y K
Sbjct: 206 YKK 208
>UNIPROTKB|B5X8M4 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8030 "Salmo salar" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 GO:GO:0070537 MEROPS:M67.004 CTD:79184
EMBL:BT047393 RefSeq:NP_001134356.1 UniGene:Ssa.10060
ProteinModelPortal:B5X8M4 GeneID:100195855 Uniprot:B5X8M4
Length = 260
Score = 154 (59.3 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 46/174 (26%), Positives = 80/174 (45%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAY 167
+ + + A L + HA S EVMGL +G++D N ++ + + + + + +
Sbjct: 6 VHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPE 65
Query: 168 EYMTAYIEA---AKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
+ +A EA A+ GR +GWYHSHP W S +DV TQ + Q + FV ++
Sbjct: 66 QLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFS 125
Query: 225 PV---RTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNKI--EDFGVHC 271
+ G+V F++ ++ SEY+ I P++ + E G C
Sbjct: 126 CFIEDKNTKTGRVLYTCFQSVQA------QKGSEYERIEIPIHVVPHEAIGKVC 173
>UNIPROTKB|Q66GV6 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 EMBL:BC082208 RefSeq:NP_001087827.1 UniGene:Xl.13095
ProteinModelPortal:Q66GV6 GeneID:447688 KEGG:xla:447688
Xenbase:XB-GENE-5812935 Uniprot:Q66GV6
Length = 261
Score = 149 (57.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 44/165 (26%), Positives = 73/165 (44%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAY 167
+ I A L V H+ S EVMGL +G++D ++ + + + + + +
Sbjct: 6 VHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKLVHIHSVIILRRSDKRKDRVEISPE 65
Query: 168 EYMTAYIEA---AKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
+ A IEA A GR +GWYHSHP W S +DV TQ + Q FV ++
Sbjct: 66 QLSAATIEADRLADITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFS 125
Query: 225 PV---RTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNKI 264
+ G++ F++ ++ SEY+ I PL+ +
Sbjct: 126 CFIEDKNTKTGRILYTCFQSVQA------QKSSEYERIEVPLHVV 164
>UNIPROTKB|Q4VA72 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0031593
"polyubiquitin binding" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0070531 "BRCA1-A
complex" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0070552 "BRISC complex"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 EMBL:CR760965 EMBL:BC096514
RefSeq:NP_001016457.1 UniGene:Str.51157 ProteinModelPortal:Q4VA72
STRING:Q4VA72 GeneID:549211 KEGG:xtr:549211 Xenbase:XB-GENE-5812885
Uniprot:Q4VA72
Length = 261
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQAQAY 167
+ I A L V H+ S EVMGL +G++D ++ + + + + + +
Sbjct: 6 VHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKVVHIHSVIILRRSDKRKDRVEISPE 65
Query: 168 EYMTAYIEA---AKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 224
+ A EA A+ GR +GWYHSHP W S +DV TQ + Q FV ++
Sbjct: 66 QLSAATTEADRLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFS 125
Query: 225 PV---RTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI--PLNKI 264
+ G++ F++ ++ SEY+ I PL+ +
Sbjct: 126 CFIEDKNTKTGRILYTCFQSVQA------QKSSEYERIEVPLHVV 164
>UNIPROTKB|C9JW37 [details] [associations]
symbol:PSMD14 "26S proteasome non-ATPase regulatory subunit
14" species:9606 "Homo sapiens" [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
HGNC:HGNC:16889 EMBL:AC009487 EMBL:AC009299 IPI:IPI00915790
ProteinModelPortal:C9JW37 SMR:C9JW37 STRING:C9JW37 PRIDE:C9JW37
Ensembl:ENST00000437630 ArrayExpress:C9JW37 Bgee:C9JW37
Uniprot:C9JW37
Length = 84
Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 106 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-IDANSMIVMDAFALPVEGTETRV 160
+ + IS+LALLKM+ H R+G +EVMGL+LG+ +D ++ V+D FA+P GT V
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSV 84
>ZFIN|ZDB-GENE-051030-42 [details] [associations]
symbol:eif3hb "eukaryotic translation initiation
factor 3, subunit H, b" species:7955 "Danio rerio" [GO:0006413
"translational initiation" evidence=IEA;ISS] [GO:0003743
"translation initiation factor activity" evidence=IEA;ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-051030-42 GO:GO:0007420 GO:GO:0007507 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF HAMAP:MF_03007
EMBL:BC086809 EMBL:BC107824 IPI:IPI00655366 RefSeq:NP_001030341.1
UniGene:Dr.86151 STRING:Q5PR67 PRIDE:Q5PR67 GeneID:567151
KEGG:dre:567151 CTD:567151 NextBio:20888545 Uniprot:Q5PR67
Length = 333
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K I+I L ++K++ H + G G+ V G+LLG + + + + + F P + TE +A
Sbjct: 18 KQIQIEGLVVMKIIKHYQEEGQGSEVVQGVLLGLVVEDQLEITNCFPFP-QHTED--DAD 74
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG ++S + +Q Q+ E V ++
Sbjct: 75 FDEVQYQMEMMRSLRHVNIDHLHVGWYQSTL-YGSFVSRALLDSQFSYQHAIEESVVLIY 133
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T + G +CL ++R PK
Sbjct: 134 DPIKT-AQGSLCLKAYRLTPK 153
>ZFIN|ZDB-GENE-040808-19 [details] [associations]
symbol:eif3ha "eukaryotic translation initiation
factor 3, subunit H, a" species:7955 "Danio rerio" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA;ISS]
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007420 "brain
development" evidence=IMP] [GO:0048882 "lateral line development"
evidence=IMP] [GO:0001944 "vasculature development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-040808-19 GO:GO:0007420 GO:GO:0006413 GO:GO:0003743
GO:GO:0001944 GO:GO:0005852 EMBL:BC079514 IPI:IPI00496845
RefSeq:NP_001003763.1 UniGene:Dr.150579 STRING:Q6AXJ2
MEROPS:M67.971 PRIDE:Q6AXJ2 Ensembl:ENSDART00000044634
Ensembl:ENSDART00000110583 GeneID:445306 KEGG:dre:445306 CTD:445306
eggNOG:NOG314046 GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
NextBio:20832051 ArrayExpress:Q6AXJ2 Bgee:Q6AXJ2 GO:GO:0048882
HAMAP:MF_03007 Uniprot:Q6AXJ2
Length = 335
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K I++ L +LK++ H + G G+ V G+LLG + + + + + F P + TE V +
Sbjct: 20 KQIQVDGLVVLKIIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDV--E 76
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG ++S + +Q Q+ E V ++
Sbjct: 77 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVSRALLDSQFSYQHAIEESVVLIY 135
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T + G +CL ++R PK
Sbjct: 136 DPLKT-AQGSLCLKAYRLTPK 155
>UNIPROTKB|B5RI54 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8030 "Salmo salar" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 HAMAP:MF_03007
EMBL:BT043978 UniGene:Ssa.31091 Uniprot:B5RI54
Length = 344
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K I+I L +LKM+ H + G G+ V G+LLG + + + + + F P + TE +A
Sbjct: 29 KQIQIEGLVVLKMIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 85
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG ++S + +Q Q+ E V ++
Sbjct: 86 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVSRALLDSQFSYQHAIEESVVLIY 144
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T + G + L ++R PK
Sbjct: 145 DPIKT-AQGSLSLKAYRLTPK 164
>UNIPROTKB|Q56JZ5 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9913 "Bos taurus" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:AY911332 EMBL:BC102096 IPI:IPI00714818
RefSeq:NP_001020493.1 UniGene:Bt.16723 STRING:Q56JZ5 PRIDE:Q56JZ5
Ensembl:ENSBTAT00000018645 GeneID:506873 KEGG:bta:506873 CTD:8667
InParanoid:Q56JZ5 NextBio:20867779 Uniprot:Q56JZ5
Length = 352
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I L +LK++ H + G GT V G+LLG + + + + + F P + TE +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 93
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T + G + L ++R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>UNIPROTKB|O15372 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9606 "Homo sapiens" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006413 "translational initiation"
evidence=IC;IDA;TAS] [GO:0006446 "regulation of translational
initiation" evidence=TAS] [GO:0003743 "translation initiation
factor activity" evidence=IC;IDA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006412 "translation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_17015
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
GO:GO:0006413 GO:GO:0006446 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 HOVERGEN:HBG000883 KO:K03247
OrthoDB:EOG4SJ5FF HAMAP:MF_03007 Reactome:REACT_1762 CTD:8667
EMBL:U54559 EMBL:AF092576 EMBL:AF092569 EMBL:AF092570 EMBL:AF092571
EMBL:AF092572 EMBL:AF092573 EMBL:AF092574 EMBL:AF092575
EMBL:BC000386 IPI:IPI00977658 RefSeq:NP_003747.1 UniGene:Hs.492599
ProteinModelPortal:O15372 SMR:O15372 DIP:DIP-33689N IntAct:O15372
MINT:MINT-5000446 STRING:O15372 PhosphoSite:O15372 PaxDb:O15372
PRIDE:O15372 DNASU:8667 Ensembl:ENST00000521861 GeneID:8667
KEGG:hsa:8667 UCSC:uc003yoa.3 GeneCards:GC08M117727 HGNC:HGNC:3273
HPA:HPA023117 HPA:HPA023553 MIM:603912 neXtProt:NX_O15372
PharmGKB:PA162384854 InParanoid:O15372 PhylomeDB:O15372
ChiTaRS:EIF3H GenomeRNAi:8667 NextBio:32511 ArrayExpress:O15372
Bgee:O15372 CleanEx:HS_EIF3H Genevestigator:O15372
GermOnline:ENSG00000147677 Uniprot:O15372
Length = 352
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I L +LK++ H + G GT V G+LLG + + + + + F P + TE +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 93
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T + G + L ++R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>MGI|MGI:1915385 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3,
subunit H" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1915385 GO:GO:0006413 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 GeneTree:ENSGT00550000074674
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 CTD:8667 EMBL:BC014755 IPI:IPI00128202
RefSeq:NP_542366.1 UniGene:Mm.289800 ProteinModelPortal:Q91WK2
SMR:Q91WK2 MINT:MINT-4098428 STRING:Q91WK2 PhosphoSite:Q91WK2
PaxDb:Q91WK2 PRIDE:Q91WK2 Ensembl:ENSMUST00000022925 GeneID:68135
KEGG:mmu:68135 InParanoid:Q91WK2 NextBio:326504 Bgee:Q91WK2
Genevestigator:Q91WK2 GermOnline:ENSMUSG00000022312 Uniprot:Q91WK2
Length = 352
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I L +LK++ H + G GT V G+LLG + + + + + F P + TE +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 93
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T + G + L ++R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>RGD|735178 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3, subunit
H" species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;ISS] [GO:0006413
"translational initiation" evidence=ISO;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
RGD:735178 GO:GO:0043231 GO:GO:0032403 GO:GO:0006413 GO:GO:0003743
EMBL:CH473950 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:BC060586 IPI:IPI00208038
RefSeq:NP_942046.1 RefSeq:XP_003750149.1 UniGene:Rn.129213
STRING:Q6P9U8 PhosphoSite:Q6P9U8 PRIDE:Q6P9U8
Ensembl:ENSRNOT00000005786 GeneID:100911110 GeneID:299899
KEGG:rno:100911110 KEGG:rno:299899 UCSC:RGD:735178
InParanoid:Q6P9U8 NextBio:645940 Genevestigator:Q6P9U8
Uniprot:Q6P9U8
Length = 352
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I L +LK++ H + G GT V G+LLG + + + + + F P + TE +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 93
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T + G + L ++R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>UNIPROTKB|B3KS98 [details] [associations]
symbol:EIF3S3 "Eukaryotic translation initiation factor 3,
subunit 3 gamma, 40kDa, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 EMBL:CH471060
GO:GO:0003743 HOGENOM:HOG000248787 HOVERGEN:HBG000883 OMA:NCFPFPK
UniGene:Hs.492599 HGNC:HGNC:3273 ChiTaRS:EIF3H EMBL:AP002905
EMBL:AC023520 EMBL:AK093128 IPI:IPI00647650
ProteinModelPortal:B3KS98 SMR:B3KS98 STRING:B3KS98 PRIDE:B3KS98
Ensembl:ENST00000276682 UCSC:uc003yob.3 ArrayExpress:B3KS98
Bgee:B3KS98 Uniprot:B3KS98
Length = 366
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I L +LK++ H + G GT V G+LLG + + + + + F P + TE +A
Sbjct: 51 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 107
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 108 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 166
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T + G + L ++R PK
Sbjct: 167 DPIKT-AQGSLSLKAYRLTPK 186
>UNIPROTKB|Q5PPY6 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8355 "Xenopus laevis" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 KO:K03247
HAMAP:MF_03007 CTD:8667 EMBL:BC087438 RefSeq:NP_001088779.1
UniGene:Xl.7704 GeneID:496043 KEGG:xla:496043
Xenbase:XB-GENE-958120 Uniprot:Q5PPY6
Length = 334
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I L +LK++ H + G G+ V G+LLG + + + + + F P + TE V+
Sbjct: 19 KQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDFD 77
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG ++S + +Q Q+ E V ++
Sbjct: 78 E--VQYQMEMMRSLRHVNIDHLHVGWYQS-TFYGTFVSRALLDSQFSYQHAIEESVVLIY 134
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T S G + L ++R PK
Sbjct: 135 DPIKT-SQGSLSLKAYRLTPK 154
>UNIPROTKB|Q5ZLE6 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9031 "Gallus gallus" [GO:0006413 "translational
initiation" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:AJ719788 IPI:IPI00592172
RefSeq:NP_001026122.1 UniGene:Gga.4721 STRING:Q5ZLE6 PRIDE:Q5ZLE6
Ensembl:ENSGALT00000025971 GeneID:420288 KEGG:gga:420288
InParanoid:Q5ZLE6 NextBio:20823227 Uniprot:Q5ZLE6
Length = 348
Score = 133 (51.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 45/182 (24%), Positives = 86/182 (47%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I L +LK++ H + G G V G+LLG + + + + + F P + TE +A
Sbjct: 33 KQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFP-QHTED--DAD 89
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 90 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 148
Query: 224 DPVRTISAGKVCLGSFRTYPKGYKPANEE---PSEYQTIPL---NKIEDFGVHCKQYYSL 277
DP++T + G + L ++R PK + E+ P + + N E+ + K Y +
Sbjct: 149 DPIKT-AQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYENMFEEVPIVIKNSYLI 207
Query: 278 DV 279
+V
Sbjct: 208 NV 209
>UNIPROTKB|B5FY35 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:59729 "Taeniopygia guttata" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:DQ213760 RefSeq:NP_001232560.1
UniGene:Tgu.10677 STRING:B5FY35 PRIDE:B5FY35 GeneID:100190645
KEGG:tgu:100190645 Uniprot:B5FY35
Length = 348
Score = 133 (51.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 45/182 (24%), Positives = 86/182 (47%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I L +LK++ H + G G V G+LLG + + + + + F P + TE +A
Sbjct: 33 KQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFP-QHTED--DAD 89
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 90 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 148
Query: 224 DPVRTISAGKVCLGSFRTYPKGYKPANEE---PSEYQTIPL---NKIEDFGVHCKQYYSL 277
DP++T + G + L ++R PK + E+ P + + N E+ + K Y +
Sbjct: 149 DPIKT-AQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYENMFEEVPIVIKNSYLI 207
Query: 278 DV 279
+V
Sbjct: 208 NV 209
>UNIPROTKB|Q6P381 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 HAMAP:MF_03007
CTD:8667 EMBL:BC064151 RefSeq:NP_989359.1 UniGene:Str.1956
ProteinModelPortal:Q6P381 STRING:Q6P381 GeneID:394989
KEGG:xtr:394989 Xenbase:XB-GENE-958115 InParanoid:Q6P381
OrthoDB:EOG4VQ9PV Uniprot:Q6P381
Length = 335
Score = 131 (51.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 106 KDIKISALALLKMVMHARS-G-GTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
K ++I + +LK++ H + G G+ V G+LLG + + + + + F P + TE V+
Sbjct: 20 KQVQIDGMVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDFD 78
Query: 164 AQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 223
+Y + + + V +GWY S YG ++S + +Q Q+ E V ++
Sbjct: 79 E--VQYQMEMMRSLRHVNIDHLHVGWYQS-TFYGTFVSRALLDSQFSYQHAIEESVVLIY 135
Query: 224 DPVRTISAGKVCLGSFRTYPK 244
DP++T G + L ++R PK
Sbjct: 136 DPIKT-GQGSLSLKAYRLTPK 155
>UNIPROTKB|B6MUN4 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:7739 "Branchiostoma floridae" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0016578 "histone deubiquitination" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008237 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0003713 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
EMBL:ABEP02030881 EMBL:ABEP02030882 EMBL:ABEP02030884
ProteinModelPortal:B6MUN4 Uniprot:B6MUN4
Length = 809
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 47/149 (31%), Positives = 70/149 (46%)
Query: 82 FKYDRKRQQDMIAAKPW-EKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKIDA 140
F YD + ++ K + E+ P F +KI A AL+ + MHA T EV+GLL G
Sbjct: 569 FSYDPFK---LVPCKRFSEESPAPFS-VKIHATALVTIDMHAHIS-TAEVIGLLGGVFHR 623
Query: 141 NSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWL 200
+ + A A P T + + T EA + G + +GWYHSHP +
Sbjct: 624 DPGALEVASAEPCNSLSTGMQCEMDPVS-QTQASEALSQAGY--SVVGWYHSHPTFAPNP 680
Query: 201 SGIDVSTQMLNQN-FQE---PFVAIVIDP 225
S D+ TQ Q F + PF+ I+++P
Sbjct: 681 SVRDIETQTKFQEWFAQGGSPFIGIIVNP 709
>MGI|MGI:3647286 [details] [associations]
symbol:Gm5136 "predicted gene 5136" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:3647286 GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
GO:GO:0010212 GO:GO:0006302 GO:GO:0031593 GO:GO:0045739
GO:GO:0031572 GO:GO:0004843 GO:GO:0004221 GO:GO:0070531
GO:GO:0070552 EMBL:BC120506 EMBL:BC120508 EMBL:AK134982
EMBL:BN000130 IPI:IPI00279112 RefSeq:NP_988991.1 UniGene:Mm.452758
ProteinModelPortal:Q7M757 MEROPS:M67.007 PRIDE:Q7M757 GeneID:368203
KEGG:mmu:368203 UCSC:uc007gzj.2 KO:K11864 NextBio:400944
Genevestigator:Q7M757 GO:GO:0070537 Uniprot:Q7M757
Length = 291
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 109 KISALALLKMVMHARSGGTLEVMGL----LLGKIDANSMIVMDAFALPVEGTETRVNAQA 164
++ L + ++ H RS L G + K++A ++ + + + +T+ +
Sbjct: 33 EVMGLCIGQLNDHGRSDSRLAYAGAEMCTVAKKMEATRIVHIHSVIILRRSDKTKDRVEI 92
Query: 165 QAYEYMTAYIEA---AKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAI 221
+ A IEA A++ GR +GWYHSHP W S +DV TQ + Q + FV +
Sbjct: 93 SPEQLSAASIEAERLAEQTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQSFVGL 152
Query: 222 V 222
+
Sbjct: 153 I 153
>TAIR|locus:2016279 [details] [associations]
symbol:BRCC36A "AT1G80210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair" evidence=IMP]
[GO:0006310 "DNA recombination" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0006281 GO:GO:0006310 KO:K11864
eggNOG:NOG322509 UniGene:At.33958 UniGene:At.50812 MEROPS:M67.A03
EMBL:AY093768 EMBL:BT002265 IPI:IPI00536421 RefSeq:NP_178138.2
ProteinModelPortal:Q8RW94 SMR:Q8RW94 PRIDE:Q8RW94
EnsemblPlants:AT1G80210.1 GeneID:844361 KEGG:ath:AT1G80210
TAIR:At1g80210 HOGENOM:HOG000005846 InParanoid:Q8RW94 OMA:QEAMHRS
PhylomeDB:Q8RW94 ProtClustDB:CLSN2680823 Genevestigator:Q8RW94
Uniprot:Q8RW94
Length = 406
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 47/166 (28%), Positives = 72/166 (43%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKI----DANSMIVMDAFALPVEGTETRVN-A 162
+ +S L + HA S T E+MGLLLG I D S M A P ++ + +
Sbjct: 6 VNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDRQKDRV 65
Query: 163 QAQAYEYMTAYIEAAK---EVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFV 219
+ + A +A + GR IGWYHSHP S +DV TQ + Q F+
Sbjct: 66 ETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFI 125
Query: 220 AIVIDPVRTIS--AGKVCLGSFRTYPKGYKPANEEPSEYQTIPLNK 263
++ + G++ + +F++ G KP N P + NK
Sbjct: 126 GLIFSCFSEDANKVGRIQVIAFQS-SDG-KP-NSIPKSMSLVLANK 168
>UNIPROTKB|G4NCJ9 [details] [associations]
symbol:MGG_01059 "26S proteasome regulatory subunit rpn-8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CM001235 GO:GO:0000502 InterPro:IPR024969 Pfam:PF13012
KO:K03038 RefSeq:XP_003717880.1 ProteinModelPortal:G4NCJ9
SMR:G4NCJ9 EnsemblFungi:MGG_01059T0 GeneID:2674847
KEGG:mgr:MGG_01059 Uniprot:G4NCJ9
Length = 357
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 106 KDIKISALALLKMVMH-----ARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRV 160
+++ ++ L LL +V H A V+G+LLG+ D ++ V ++FA+P E E
Sbjct: 14 RNVSVAPLVLLSVVDHYNRESANQTKNKRVVGVLLGQNDGKNVRVSNSFAVPFEEDEKNP 73
Query: 161 NAQAQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVA 220
+ + Y+ + + K+V E IGWYHS P S ++++ ++ + P +
Sbjct: 74 SVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRA--SDLEIN-ELFKRYTPNPLL- 129
Query: 221 IVIDPVRTISAG 232
++ID V+ AG
Sbjct: 130 VIID-VQPKEAG 140
>RGD|1588543 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase
complex" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO;ISS]
[GO:0010165 "response to X-ray" evidence=IEA;ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA;ISO] [GO:0031572 "G2 DNA
damage checkpoint" evidence=ISO;ISS] [GO:0031593 "polyubiquitin
binding" evidence=ISO;ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISO;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO;ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO;ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISO;ISS] [GO:0070552 "BRISC complex" evidence=ISO;ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1588543
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 EMBL:CH474092 EMBL:BC166833
IPI:IPI00197234 RefSeq:NP_001120772.1 UniGene:Rn.52727
ProteinModelPortal:B2RYM5 PRIDE:B2RYM5 GeneID:316794
KEGG:rno:316794 NextBio:671241 Genevestigator:B2RYM5 Uniprot:B2RYM5
Length = 291
Score = 105 (42.0 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 177 AKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIV 222
A+ GR +GWYHSHP W S +DV TQ + Q + FV ++
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 46 (21.3 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKID 139
+ + + A L + HA S EVMGL +G+++
Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGELN 43
Score = 45 (20.9 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 219 VAIVIDPVRTISAGKVCLGSFRTYPKGYKPANEEPSEYQTI 259
+ I + V ++ GKVCL S PK EE Y+ I
Sbjct: 187 IEIPVHVVPHVTIGKVCLESAVELPKIL--CQEEQDAYRRI 225
>TAIR|locus:2083318 [details] [associations]
symbol:BRCC36B "AT3G06820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002686 GO:GO:0006281 KO:K11864
IPI:IPI00538324 RefSeq:NP_001078118.1 UniGene:At.40457
ProteinModelPortal:F4JC55 SMR:F4JC55 MEROPS:M67.A03 PRIDE:F4JC55
EnsemblPlants:AT3G06820.2 GeneID:819866 KEGG:ath:AT3G06820
Uniprot:F4JC55
Length = 405
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 45/166 (27%), Positives = 72/166 (43%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKIDAN------SMIVMDAFALP-VEGTETRV 160
+ +S L + HA S T E+MGLLLG I+ + + ++ A P + + RV
Sbjct: 6 VNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGESATAMIWGASPQPRSDRQKDRV 65
Query: 161 NAQAQAYEYMTAYIEAAK-EVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFV 219
+ +A + GR IGWYHSHP S +DV TQ + Q F+
Sbjct: 66 ETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFI 125
Query: 220 AIVIDPVRTIS--AGKVCLGSFRTYPKGYKPANEEPSEYQTIPLNK 263
++ + G++ + +F++ G KP N P + NK
Sbjct: 126 GLIFSCFSEDANKVGRIQVIAFQS-SDG-KP-NSIPKSMSLVLANK 168
>MGI|MGI:2389572 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=ISO] [GO:0010165 "response to X-ray"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=ISO] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050790 "regulation of catalytic activity" evidence=ISO]
[GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO] [GO:0070537 "histone H2A
K63-linked deubiquitination" evidence=ISO] [GO:0070552 "BRISC
complex" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:2389572 GO:GO:0030234 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0010212 GO:GO:0006302
GO:GO:0031593 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 HOVERGEN:HBG002142 GO:GO:0000152 EMBL:S68022
EMBL:AK011876 EMBL:AK149844 EMBL:AL671860 EMBL:BC021313
EMBL:BC048179 IPI:IPI00137103 IPI:IPI00880818 RefSeq:NP_001159929.1
RefSeq:NP_001159931.1 RefSeq:NP_666068.1 UniGene:Mm.226957
ProteinModelPortal:P46737 SMR:P46737 STRING:P46737
PhosphoSite:P46737 PaxDb:P46737 PRIDE:P46737
Ensembl:ENSMUST00000033544 Ensembl:ENSMUST00000114074
Ensembl:ENSMUST00000118428 GeneID:210766 KEGG:mmu:210766
UCSC:uc009tpy.2 GeneTree:ENSGT00390000000360 InParanoid:Q3UDZ4
OrthoDB:EOG45490C NextBio:373053 Bgee:P46737 CleanEx:MM_BRCC3
Genevestigator:P46737 GermOnline:ENSMUSG00000031201 Uniprot:P46737
Length = 291
Score = 106 (42.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 177 AKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPV---RTISAGK 233
A+ GR +GWYHSHP W S +DV TQ + Q + FV ++ + G+
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGR 167
Query: 234 VCLGSFRTYPKGYKPANEEPSEYQTIPL 261
V F++ ++ SEY+ I +
Sbjct: 168 VLYTCFQSIQA------QKSSEYERIEI 189
Score = 51 (23.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETR 159
+ + + A L + HA S EVMGL +G++ N I D+ GTE R
Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGEL--NDDIRSDS-KFTYTGTEMR 60
>UNIPROTKB|F1RZ41 [details] [associations]
symbol:BRCC36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070552 "BRISC complex" evidence=IEA] [GO:0070537
"histone H2A K63-linked deubiquitination" evidence=IEA] [GO:0070531
"BRCA1-A complex" evidence=IEA] [GO:0045739 "positive regulation of
DNA repair" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0010165
"response to X-ray" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0030234 GO:GO:0008237 GO:GO:0006302 GO:GO:0010165
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 GO:GO:0000152
GeneTree:ENSGT00390000000360 EMBL:CU914693 EMBL:CU861979
RefSeq:NP_001229952.1 UniGene:Ssc.49952 Ensembl:ENSSSCT00000014006
GeneID:100516948 KEGG:ssc:100516948 CTD:100516948 OMA:IPIHVVP
Uniprot:F1RZ41
Length = 291
Score = 109 (43.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 32/131 (24%), Positives = 57/131 (43%)
Query: 137 KIDANSMIVMDAFALPVEGTETRVNAQAQAYEYMTAYIEA---AKEVGRLENAIGWYHSH 193
K+DA ++ + + + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 194 PGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPV---RTISAGKVCLGSFRTYPKGYKPAN 250
P W S +DV TQ + Q + FV ++ + G+V F++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQA------ 178
Query: 251 EEPSEYQTIPL 261
++ SEY+ I +
Sbjct: 179 QKSSEYERIEI 189
Score = 46 (21.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKID 139
+ + + A L + HA S EVMGL +G+++
Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGELN 43
>TAIR|locus:2196469 [details] [associations]
symbol:TIF3H1 "AT1G10840" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0003743 EMBL:AC007354
eggNOG:COG1310 HOGENOM:HOG000248787 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 EMBL:AF285833 EMBL:AY054641 EMBL:AY081546
EMBL:BT000765 EMBL:AY087338 IPI:IPI00526917 PIR:B86242
RefSeq:NP_563880.1 UniGene:At.17013 ProteinModelPortal:Q9C5Z2
IntAct:Q9C5Z2 STRING:Q9C5Z2 PaxDb:Q9C5Z2 PRIDE:Q9C5Z2
EnsemblPlants:AT1G10840.1 GeneID:837627 KEGG:ath:AT1G10840
TAIR:At1g10840 InParanoid:Q9C5Z2 PhylomeDB:Q9C5Z2
ProtClustDB:CLSN2687763 Genevestigator:Q9C5Z2 Uniprot:Q9C5Z2
Length = 337
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKIDANSMI-VMDAFALPVEGTETRVNAQAQA 166
++I LA+LK++ H + V G LLG +D S++ V + F PV + + +A
Sbjct: 25 VQIEGLAVLKIIKHCKEFSPTLVTGQLLG-LDVGSVLEVTNCFPFPVRDDDEEI--EADG 81
Query: 167 YEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 225
Y + +EV N +GWY S G + + + T M Q + V I+ DP
Sbjct: 82 ANYQLEMMRCLREVNVDNNTVGWYQSTV-LGSYQTVELIETFMNYQENIKRCVCIIYDP 139
>UNIPROTKB|A5PJP6 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9913 "Bos taurus" [GO:0070552 "BRISC complex" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0031593 "polyubiquitin binding" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070531 "BRCA1-A complex"
evidence=ISS] [GO:0031572 "G2 DNA damage checkpoint" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0010212 GO:GO:0006302
GO:GO:0031593 GO:GO:0045739 GO:GO:0031572 GO:GO:0004843
GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537
EMBL:BT021737 EMBL:BC142193 IPI:IPI00687250 IPI:IPI00854460
RefSeq:NP_001069258.1 UniGene:Bt.58955 ProteinModelPortal:A5PJP6
STRING:A5PJP6 MEROPS:M67.004 GeneID:519513 KEGG:bta:519513
CTD:79184 eggNOG:NOG322509 HOGENOM:HOG000007866 NextBio:20872891
Uniprot:A5PJP6
Length = 316
Score = 105 (42.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 177 AKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIV 222
A+ GR +GWYHSHP W S +DV TQ + Q + FV ++
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 49 (22.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
+ + + A L + HA S EVMGL +G++ N + D GTE R A+
Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGEL--NDDLRNDP-KFTYTGTEMRTVAE 64
>UNIPROTKB|G5E595 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9913 "Bos taurus" [GO:0070552 "BRISC complex" evidence=IEA]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=IEA]
[GO:0070531 "BRCA1-A complex" evidence=IEA] [GO:0045739 "positive
regulation of DNA repair" evidence=IEA] [GO:0031593 "polyubiquitin
binding" evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0000152
"nuclear ubiquitin ligase complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0030234 GO:GO:0008237
GO:GO:0006302 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 GO:GO:0000152 GeneTree:ENSGT00390000000360
OMA:IPIHVVP EMBL:DAAA02070025 EMBL:DAAA02070022 EMBL:DAAA02070023
EMBL:DAAA02070024 Ensembl:ENSBTAT00000010280 Uniprot:G5E595
Length = 316
Score = 105 (42.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 177 AKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIV 222
A+ GR +GWYHSHP W S +DV TQ + Q + FV ++
Sbjct: 108 AELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 49 (22.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 108 IKISALALLKMVMHARSGGTLEVMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQ 163
+ + + A L + HA S EVMGL +G++ N + D GTE R A+
Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGEL--NDDLRNDP-KFTYTGTEMRTVAE 64
>POMBASE|SPCC1682.10 [details] [associations]
symbol:rpn8 "19S proteasome regulatory subunit Rpn8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPCC1682.10 GO:GO:0005829 GO:GO:0007346
GO:GO:0005635 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0008541 eggNOG:COG1310 GO:GO:0004843 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 MEROPS:M67.973
PIR:T41067 RefSeq:NP_587803.1 ProteinModelPortal:O74440 SMR:O74440
IntAct:O74440 STRING:O74440 PRIDE:O74440 EnsemblFungi:SPCC1682.10.1
GeneID:2538912 KEGG:spo:SPCC1682.10 OMA:KKINANE OrthoDB:EOG4QC4FM
NextBio:20800090 Uniprot:O74440
Length = 324
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 36/130 (27%), Positives = 67/130 (51%)
Query: 106 KDIKISALALLKMV-MHARSG-GTLE-VMGLLLGKIDANSMIVMDAFALPVEGTETRVNA 162
+ + + L LL V + RS GT V+G+LLG+ + + + V +++A+P E E +
Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASV 74
Query: 163 QAQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIV 222
+ +M + E K++ E +GWYH+ P S ++++ +L + P V ++
Sbjct: 75 WFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRP--SDLEINN-LLKKYIPNP-VLVI 130
Query: 223 IDPVRTISAG 232
ID V+ S G
Sbjct: 131 ID-VKPKSVG 139
>FB|FBgn0022023 [details] [associations]
symbol:eIF-3p40 "Eukaryotic initiation factor 3 p40 subunit"
species:7227 "Drosophila melanogaster" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
EMBL:AE014134 GO:GO:0022008 GO:GO:0003743 eggNOG:COG1310
GO:GO:0005852 GeneTree:ENSGT00550000074674 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 EMBL:AF160896 EMBL:BT071794 RefSeq:NP_524834.2
RefSeq:NP_995631.1 UniGene:Dm.1462 ProteinModelPortal:Q9U9Q4
IntAct:Q9U9Q4 MINT:MINT-1564430 STRING:Q9U9Q4 PaxDb:Q9U9Q4
PRIDE:Q9U9Q4 EnsemblMetazoa:FBtr0079030 EnsemblMetazoa:FBtr0079031
GeneID:45682 KEGG:dme:Dmel_CG9124 UCSC:CG9124-RA CTD:45682
FlyBase:FBgn0022023 InParanoid:Q9U9Q4 OrthoDB:EOG4JWSW1
PhylomeDB:Q9U9Q4 ChiTaRS:eIF-3p40 GenomeRNAi:45682 NextBio:838284
Bgee:Q9U9Q4 Uniprot:Q9U9Q4
Length = 338
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 94 AAKPWEKDPHFFKDIKISALALLKMVMHARS-GGTLEV-MGLLLGKIDANSMIVMDAFAL 151
AA+ + D + ++ LA++KMV H +++ G LLG + + + + F
Sbjct: 9 AARTEDSD-NTINYVQCDGLAVMKMVKHCHEESSNMDLAQGALLGLVVDKCLEITNCFPF 67
Query: 152 PVEGTETRVNAQAQAYEYMTAYIEAAKEVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLN 211
P G ET + Y+ +T + + V +GWY S G LS + +Q
Sbjct: 68 PKSGDETM---DEEMYQ-LTV-MRRLRRVNVDHLHVGWYQSSD-VGNSLSMALLESQYHY 121
Query: 212 QNFQEPFVAIVIDPVRTISAGKVCLGSFRTYPKG---YKPANEEPSEYQTI 259
Q E V +V D ++ S G +CL ++R P+ YK + P ++T+
Sbjct: 122 QTSIEESVVVVYDTQKS-SRGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTL 171
>SGD|S000005787 [details] [associations]
symbol:RPN8 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034515 "proteasome storage granule" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 SGD:S000005787 EMBL:BK006948 GO:GO:0008541
GO:GO:0006511 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 RefSeq:NP_014907.3 GeneID:854437
KEGG:sce:YOR264W GO:GO:0034515 RefSeq:NP_014904.3 PDB:4B4T
PDBsum:4B4T GeneID:854435 KEGG:sce:YOR261C KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 OrthoDB:EOG4QC4FM
EMBL:Z75169 EMBL:AY558039 PIR:S67158 ProteinModelPortal:Q08723
SMR:Q08723 DIP:DIP-1574N IntAct:Q08723 MINT:MINT-405204
STRING:Q08723 PaxDb:Q08723 PeptideAtlas:Q08723 EnsemblFungi:YOR261C
NextBio:976670 Genevestigator:Q08723 GermOnline:YOR261C
Uniprot:Q08723
Length = 338
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 108 IKISALALLKMVMHARSGGTLE---VMGLLLGKIDANSMIVMDAFALPVEGTETRVNAQA 164
+ I+ L LL + H T E +G++LG +++++ V ++FALP E E +
Sbjct: 8 VTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDVWF 67
Query: 165 QAYEYMTAYIEAAKEVGRLENAIGWYHSHP 194
+ Y+ E K++ E IGWYHS P
Sbjct: 68 LDHNYIENMNEMCKKINAKEKLIGWYHSGP 97
>FB|FBgn0002579 [details] [associations]
symbol:RpL36 "Ribosomal protein L36" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR000509 Pfam:PF01158
PROSITE:PS01190 GO:GO:0005811 GO:GO:0006412 EMBL:AE014298
GO:GO:0005840 GO:GO:0003735 EMBL:AL031581 eggNOG:COG5051 KO:K02920
OMA:GTHRRAK PANTHER:PTHR10114 GeneTree:ENSGT00390000011943
CTD:25873 EMBL:U20543 EMBL:AY070831 EMBL:BT029917 PIR:T13383
RefSeq:NP_476629.1 RefSeq:NP_726686.1 RefSeq:NP_726687.1
RefSeq:NP_726688.1 UniGene:Dm.14146 ProteinModelPortal:P49630
SMR:P49630 DIP:DIP-21779N MINT:MINT-751097 STRING:P49630
PaxDb:P49630 PRIDE:P49630 EnsemblMetazoa:FBtr0070155
EnsemblMetazoa:FBtr0070156 EnsemblMetazoa:FBtr0070157
EnsemblMetazoa:FBtr0070158 GeneID:31009 KEGG:dme:Dmel_CG7622
FlyBase:FBgn0002579 InParanoid:P49630 OrthoDB:EOG4FXPR3
PhylomeDB:P49630 ChiTaRS:RpL36 GenomeRNAi:31009 NextBio:771455
Bgee:P49630 GermOnline:CG7622 Uniprot:P49630
Length = 115
Score = 92 (37.4 bits), Expect = 0.00099, P = 0.00099
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLK 42
MA RYELA+GL KGH+ +KI+ K K+ +R SRLK
Sbjct: 1 MAVRYELAIGLNKGHKTSKIRNVKYTGDK--KVKGLRGSRLK 40
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 394 376 0.00088 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 614 (65 KB)
Total size of DFA: 267 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 27.73u 0.08s 27.81t Elapsed: 00:00:27
Total cpu time: 27.74u 0.08s 27.82t Elapsed: 00:00:28
Start: Thu Aug 15 13:07:28 2013 End: Thu Aug 15 13:07:56 2013