BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9086
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49630|RL36_DROME 60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36 PE=3
SV=1
Length = 115
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/112 (75%), Positives = 93/112 (83%), Gaps = 2/112 (1%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RYELA+GL KGH+ +KI+ K K+ +R SRLK IQT++TKF RDLVREV
Sbjct: 1 MAVRYELAIGLNKGHKTSKIRNVKYTGDK--KVKGLRGSRLKNIQTRHTKFMRDLVREVV 58
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKA 112
GHAPYEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQ+RKA
Sbjct: 59 GHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRKA 110
>sp|Q4PM12|RL36_IXOSC 60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1
Length = 110
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 86/113 (76%), Gaps = 12/113 (10%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
M +Y+LAVGL KGH+ TK ++ K RPSR KG +K+T+F RDL+REVC
Sbjct: 1 MGVQYKLAVGLGKGHKVTKNEY------------KPRPSRRKGALSKHTRFVRDLIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKAA 113
G AP+E+RAMELLKVSKDKRALKF+K+RLGTH+R KRKR+ELSN+L RKAA
Sbjct: 49 GFAPFERRAMELLKVSKDKRALKFIKKRLGTHLRGKRKRDELSNVLVAQRKAA 101
>sp|Q6DER2|RL36_XENTR 60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1
Length = 105
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 80/106 (75%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KGHR TK + K R R +G TK+TKF RD++REVC
Sbjct: 1 MAIRYPMAVGLNKGHRVTK------------NVTKPRHCRRRGRLTKHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVL 94
>sp|Q66KU4|RL36_XENLA 60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1
Length = 105
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 80/106 (75%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KGHR TK + K R R +G TK+TKF RD++REVC
Sbjct: 1 MAIRYPMAVGLNKGHRVTK------------NVTKPRHCRRRGRLTKHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVL 94
>sp|Q5RAZ9|RL36_PONAB 60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3
Length = 105
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KGH+ TK + K R SR +G TK+TKF RD++REVC
Sbjct: 1 MALRYPMAVGLNKGHKVTK------------NVSKPRHSRRRGRLTKHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>sp|Q9Y3U8|RL36_HUMAN 60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3
Length = 105
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KGH+ TK + K R SR +G TK+TKF RD++REVC
Sbjct: 1 MALRYPMAVGLNKGHKVTK------------NVSKPRHSRRRGRLTKHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>sp|Q3T171|RL36_BOVIN 60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3
Length = 105
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KGH+ TK + K R SR +G TK+TKF RD++REVC
Sbjct: 1 MALRYPMAVGLNKGHKVTK------------NVGKPRHSRRRGRLTKHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>sp|Q8UW19|RL36_LAPHA 60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3 SV=1
Length = 105
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 80/106 (75%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KGH+ TK + K R R +G TK+TKF RD++REVC
Sbjct: 1 MAIRYPMAVGLNKGHKVTK------------NVSKPRHCRRRGRLTKHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>sp|Q90YT2|RL36_ICTPU 60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3 SV=1
Length = 105
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 80/106 (75%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGLKKGH TK + K + SR G TK++KF RD++REVC
Sbjct: 1 MAIRYPMAVGLKKGHPVTK------------NVTKPKHSRRGGRLTKHSKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNIL
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNIL 94
>sp|P39032|RL36_RAT 60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2
Length = 105
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 80/106 (75%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KGH+ TK + K R SR +G TK+TKF RD++REVC
Sbjct: 1 MALRYPMAVGLNKGHKVTK------------NVSKPRHSRRRGRLTKHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 AFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>sp|Q98TF6|RL36_CHICK 60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1
Length = 105
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 80/106 (75%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KG++ TK + K R R +G TK+TKF RD++REVC
Sbjct: 1 MAIRYPMAVGLNKGYKVTK------------NVSKPRHCRRRGRLTKHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>sp|Q6Q415|RL36_DANRE 60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=3 SV=1
Length = 105
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 78/106 (73%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
M RY +AVGL KGH+ TK + K + SR +G TK+ KF RDL+REVC
Sbjct: 1 MVVRYPMAVGLNKGHKVTK------------NVSKPKHSRRRGRLTKHAKFARDLIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN L
Sbjct: 49 GFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNTL 94
>sp|P47964|RL36_MOUSE 60S ribosomal protein L36 OS=Mus musculus GN=Rpl36 PE=2 SV=2
Length = 105
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 78/106 (73%), Gaps = 12/106 (11%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA RY +AVGL KGH+ TK + K R SR + T +TKF RD++REVC
Sbjct: 1 MALRYPMAVGLNKGHKVTK------------NVSKPRHSRRRSRLTNHTKFVRDMIREVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 106
G APYE+RAMELLKVSK KRALKF+K+R+GTHIRAKRKREELSN+L
Sbjct: 49 GFAPYERRAMELLKVSKSKRALKFIKKRVGTHIRAKRKREELSNVL 94
>sp|P49181|RL36_CAEEL 60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36 PE=1
SV=3
Length = 104
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 12/106 (11%)
Query: 7 LAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPYE 66
LAVGL KGH T++ VK R +R KG+ +K TK R+LVRE+ G APYE
Sbjct: 9 LAVGLNKGHAATQLP------------VKQRQNRHKGVASKKTKIVRELVREITGFAPYE 56
Query: 67 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKA 112
+R +E+L++SKDKRALKFLKRR+GTH RAK KREEL N++ RKA
Sbjct: 57 RRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRKA 102
>sp|P0C6E6|RL36X_HUMAN Putative 60S ribosomal protein L36-like 1 OS=Homo sapiens PE=5 SV=1
Length = 105
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 73/113 (64%), Gaps = 12/113 (10%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
M Y + VGL KGH+ TK + K R SR G TK+TK R +++EVC
Sbjct: 1 MVLCYTMVVGLNKGHKLTK------------NLSKPRHSRSLGRPTKHTKCVRGMIQEVC 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKAA 113
G PYE+ MELLKVSKDK+ALKF+K+R+GTHI KRKREELSN+L RK A
Sbjct: 49 GFTPYERCTMELLKVSKDKQALKFIKKRVGTHIHTKRKREELSNVLAITRKVA 101
>sp|Q9LRB8|RL36_ENTCP 60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3
SV=1
Length = 101
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 12/108 (11%)
Query: 6 ELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPY 65
E+AVGL KGH Q T K RPSR KG ++ K R +VREV G APY
Sbjct: 3 EIAVGLNKGH------------QVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPY 50
Query: 66 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKAA 113
E+R MELLKV KDKRALK KR+LGTH+R K+KREE++ +L +M+ A+
Sbjct: 51 ERRVMELLKVGKDKRALKMCKRKLGTHMRGKKKREEMAGVLRKMQAAS 98
>sp|O80929|RL361_ARATH 60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2
SV=1
Length = 113
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 68/104 (65%), Gaps = 12/104 (11%)
Query: 7 LAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPYE 66
L VGL KGH T+ + A RP+ KG +K T F R L+REV G APYE
Sbjct: 10 LFVGLNKGHVVTRRELAP------------RPNSRKGKTSKRTIFIRKLIREVAGMAPYE 57
Query: 67 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMR 110
KR ELLKV KDKRALK KR+LGTH RAKRKREE+S++L +MR
Sbjct: 58 KRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>sp|Q9LZ57|RL363_ARATH 60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=3
SV=1
Length = 108
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 68/107 (63%), Gaps = 12/107 (11%)
Query: 7 LAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPYE 66
L VGL KGH TK + RP+ KG +K T F R+L++EV G APYE
Sbjct: 6 LFVGLNKGHVVTKREQPP------------RPNNRKGKTSKRTIFIRNLIKEVAGQAPYE 53
Query: 67 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKAA 113
KR ELLKV KDKRALK KR+LGTH RAKRKREE+S++L +MR
Sbjct: 54 KRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 100
>sp|Q9M352|RL362_ARATH 60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2
SV=1
Length = 112
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 68/107 (63%), Gaps = 12/107 (11%)
Query: 7 LAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPYE 66
L VGL KGH T+ + A RP KG +K T F R+L++EV G APYE
Sbjct: 10 LFVGLNKGHVVTRRELAP------------RPRSRKGKTSKRTIFIRNLIKEVAGQAPYE 57
Query: 67 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKAA 113
KR ELLKV KDKRALK KR+LGTH RAKRKREE+S++L +MR
Sbjct: 58 KRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 104
>sp|Q9HFR7|RL36_TRIHM 60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3 SV=1
Length = 105
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 12/106 (11%)
Query: 7 LAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPYE 66
LAVGL KGH+ T +++VK R SR KG +K T F R++V+EV G APYE
Sbjct: 11 LAVGLNKGHKTT------------ARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYE 58
Query: 67 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKA 112
+R +ELL+ SKDKRA K K+RLGT RAKRK +EL ++ + R+A
Sbjct: 59 RRVIELLRNSKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESRRA 104
>sp|Q92365|RL36A_SCHPO 60S ribosomal protein L36-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36a PE=3 SV=2
Length = 99
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 66/112 (58%), Gaps = 14/112 (12%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MAP L VGL KG TK + RPSR KG +K T F R +VREV
Sbjct: 1 MAP--GLVVGLNKGKVLTKRQLPE------------RPSRRKGQLSKRTSFVRSIVREVA 46
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKA 112
G APYE+R MEL++ S+DKRA K K+RLGT RAK K EEL++++ R A
Sbjct: 47 GFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSRLA 98
>sp|O94658|RL36B_SCHPO 60S ribosomal protein L36-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36b PE=3 SV=1
Length = 99
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 66/112 (58%), Gaps = 14/112 (12%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MAP L VGL KG TK + RPSR KG +K T F R +VREV
Sbjct: 1 MAP--GLVVGLNKGKTLTKRQLPE------------RPSRRKGHLSKRTAFVRSIVREVA 46
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKA 112
G APYE+R MEL++ S+DKRA K K+RLGT RAK K EEL++++ R A
Sbjct: 47 GFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSRLA 98
>sp|O14455|RL36B_YEAST 60S ribosomal protein L36-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36B PE=1 SV=3
Length = 100
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 12/111 (10%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
MA + +A+GL KG + T++ A ++ K KG + TKF R LVRE+
Sbjct: 1 MAVKTGIAIGLNKGKKVTQMTPAPKISYK------------KGAASNRTKFVRSLVREIA 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRK 111
G +PYE+R ++L++ S +KRA K K+RLG+ RAK K EE++NI+ R+
Sbjct: 49 GLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>sp|P05745|RL36A_YEAST 60S ribosomal protein L36-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36A PE=1 SV=3
Length = 100
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 12/111 (10%)
Query: 1 MAPRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVC 60
M + +A+GL KG + T + A ++ K KG + TKF R LVRE+
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPKISYK------------KGAASNRTKFVRSLVREIA 48
Query: 61 GHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRK 111
G +PYE+R ++L++ S +KRA K K+RLG+ RAK K EE++NI+ R+
Sbjct: 49 GLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>sp|P52866|RL36_DAUCA 60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2
Length = 106
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 3 PRYELAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGH 62
P L VGL KGH TK K + RPS KG +K T F R+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK------------KELAPRPSDRKGKTSKRTHFVRNLIREVAGF 53
Query: 63 APYEKRAMELLKVSKDKRALKFLKRRLG 90
PYEKR ELLKV KDKRALK + ++G
Sbjct: 54 XPYEKRITELLKVGKDKRALKVRQEKVG 81
>sp|Q55AQ9|RL36_DICDI 60S ribosomal protein L36 OS=Dictyostelium discoideum GN=rpl36 PE=3
SV=1
Length = 105
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 42 KGIQTKNTKFTRDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 101
K + TK RD++RE+ G +PYE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 102 LSNI 105
++NI
Sbjct: 95 IANI 98
>sp|P47834|RL36_CANAX 60S ribosomal protein L36 OS=Candida albicans GN=RPL36 PE=3 SV=1
Length = 99
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 12/105 (11%)
Query: 7 LAVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPYE 66
+A G+ KG + T +K V + S KG ++ T F R +V+EV G APYE
Sbjct: 6 IAAGVNKGRKTT------------AKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYE 53
Query: 67 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRK 111
+R +EL++ + +KRA K K+RLGTH RA RK EE++ ++ + R+
Sbjct: 54 RRLIELIRNAGEKRAKKLAKKRLGTHKRALRKVEEMTQVIAESRR 98
>sp|Q24F59|RL36_TETTS 60S ribosomal protein L36 OS=Tetrahymena thermophila (strain SB210)
GN=RPL36 PE=1 SV=1
Length = 104
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 12/107 (11%)
Query: 8 AVGLKKGHRNTKIKWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPYEK 67
AVG+ KG T+++ K+ K + KG K R ++REV G APYEK
Sbjct: 6 AVGINKGFITTQLE---------KKLQKHSAVQRKGKLGKRVALVRQVIREVTGFAPYEK 56
Query: 68 RAMELLKV--SKD-KRALKFLKRRLGTHIRAKRKREELSNILTQMRK 111
R +EL+K +KD K+A K ++RLGTH RAK K+ L + RK
Sbjct: 57 RIIELIKAGSAKDSKKATKIARKRLGTHRRAKVKKALLEEAVRAQRK 103
>sp|Q8SRP1|RL36_ENCCU 60S ribosomal protein L36 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL36 PE=1 SV=1
Length = 107
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 45 QTKNTKFTRDLV-REVCGHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 103
+T+ ++F V E+ G +P EK+A+ LL+ + +A K L++RLG+H RA K E+L+
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 104 NILTQ 108
+L +
Sbjct: 102 RMLLE 106
>sp|Q54XN7|Y8827_DICDI Uncharacterized helicase DDB_G0278827 OS=Dictyostelium discoideum
GN=DDB_G0278827 PE=3 SV=1
Length = 1816
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 26 LAQKTSKIVKMRPSRLKGIQTKNT------KFTRDLVREVCGHAPYEKRAMELLKVSKDK 79
LAQ+ + R + I+ K +F + L R + P + MEL ++ +
Sbjct: 1175 LAQRVYNDITHRNTNPNIIEEKKQLDLVIERFQKSLGRALADLEPNDPEKMELERLKAKR 1234
Query: 80 RALKFLKRRLG----THIRAKRKREELSNILTQMRKAAH 114
+L +LK + G + I K K++ L+ LTQ A H
Sbjct: 1235 ASLDYLKPQFGNLLSSDIDEKVKKDPLAPALTQGIAAHH 1273
>sp|P75342|Y436_MYCPN Uncharacterized lipoprotein MG307 homolog OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_436 PE=3 SV=1
Length = 1244
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 12 KKGHRNTKI-KWANSLAQKTSKIVKMRPSRLKGIQTKNTKFTRDLVREVCGHAPYEKRAM 70
K G T I + +N L KT+ + K+R L+ IQTK F ++ ++ P +
Sbjct: 731 KVGQEETSISEESNKLKTKTADVDKIRDKILENIQTKVNDFVKNKLKPALAPRPAYSNVI 790
Query: 71 ELLKVSKDK 79
LL V+ DK
Sbjct: 791 -LLNVNNDK 798
>sp|E1B7X9|SMRCD_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Bos
taurus GN=SMARCAD1 PE=3 SV=2
Length = 1028
Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 53 RDLVREVCGHAPYEKRAMELLKVSKDKRALKF-LKRRLGTHIRAKRKREELSNILTQMRK 111
R + EV P +K +EL +S+ + L L RL I K E+ N++ Q+RK
Sbjct: 723 RRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMEKNTEMCNVMMQLRK 782
Query: 112 AAH 114
A+
Sbjct: 783 MAN 785
>sp|Q9H4L7|SMRCD_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Homo
sapiens GN=SMARCAD1 PE=1 SV=2
Length = 1026
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 53 RDLVREVCGHAPYEKRAMELLKVSKDKRALKF-LKRRLGTHIRAKRKREELSNILTQMRK 111
R + EV P +K +EL +S+ + L L RL I K E+ N++ Q+RK
Sbjct: 721 RRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRK 780
Query: 112 AAH 114
A+
Sbjct: 781 MAN 783
>sp|A3PAY7|PUR9_PROM0 Bifunctional purine biosynthesis protein PurH OS=Prochlorococcus
marinus (strain MIT 9301) GN=purH PE=3 SV=1
Length = 517
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 53 RDLVREVCGHAPYEKRAMELLKVSKDKRALKFLKRRL 89
+D+ E +++ A+E+LKV K+ R LKF K +L
Sbjct: 326 KDIFLECVVAPSFDEEALEILKVKKNLRILKFSKDQL 362
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.130 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,067,110
Number of Sequences: 539616
Number of extensions: 1140394
Number of successful extensions: 3780
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3727
Number of HSP's gapped (non-prelim): 53
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)