BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9088
(756 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242025486|ref|XP_002433155.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518696|gb|EEB20417.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 436
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/389 (73%), Positives = 329/389 (84%), Gaps = 2/389 (0%)
Query: 36 ILKSTTTLEQLLEEINFQRAKEKRQYLRNDMFL--TQGTSYWTDLFVRYFLFQTDSNIDC 93
+LK+++ +EQL+EEINFQRAKE RQ L++D GT+YWTDLFVR FLFQT+ +IDC
Sbjct: 15 LLKTSSMMEQLIEEINFQRAKEMRQLLKDDRGYGGMHGTTYWTDLFVRNFLFQTELSIDC 74
Query: 94 DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDY 153
DDLLFFVRKK+IK SSR LPKFETEVEVFRKDS+KLPIGDPD+DWEETVYLN+IIHQFDY
Sbjct: 75 DDLLFFVRKKHIKGSSRYLPKFETEVEVFRKDSKKLPIGDPDIDWEETVYLNLIIHQFDY 134
Query: 154 TLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFH 213
LTLAICTRTS K LQ+LKRHSQKVYASPS RRMDTKGE E+MTYP +CF +DNF+EVF
Sbjct: 135 VLTLAICTRTSCKELQILKRHSQKVYASPSHRRMDTKGETEDMTYPYICFMIDNFDEVFS 194
Query: 214 DILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIF 273
DI VRDGEMVCVELVA+DR GS VIFLGSIRYDALK VYDAR S + K +QRM+FG+F
Sbjct: 195 DITVRDGEMVCVELVATDREGSTHGVIFLGSIRYDALKWVYDARVSANAKMSQRMTFGLF 254
Query: 274 SNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDF 333
S+ S+ RIE+V+MKGP GKG AE+AVTKP G G ETPTSEPG C DMWD DW+ DPEDF
Sbjct: 255 SSASSGRIEYVRMKGPDGKGHAEVAVTKPPGAGCETPTSEPGLCAVDMWDQDWNQDPEDF 314
Query: 334 YYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRDE 393
+ YRHQRRLSDPSAN+N F + WK + + SE+EGLDSLA+ + E+EAGD+RDE
Sbjct: 315 FVYRHQRRLSDPSANLNYFVRGGWKSKSDSVNPRTRSENEGLDSLANTMTEVEAGDVRDE 374
Query: 394 LDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
LDDGAYNPLWTM+GFTQTFHFWKE+KRAQ
Sbjct: 375 LDDGAYNPLWTMKGFTQTFHFWKENKRAQ 403
>gi|189236528|ref|XP_975467.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270005304|gb|EFA01752.1| hypothetical protein TcasGA2_TC007350 [Tribolium castaneum]
Length = 676
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/360 (78%), Positives = 315/360 (87%), Gaps = 6/360 (1%)
Query: 37 LKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNIDCD 94
LK+ T LEQLLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ +S IDCD
Sbjct: 9 LKTPTVLEQLLEEINFQRTKEMRQLLKDDSGFVMLQGTTYWTDLFVRHFLFQNESTIDCD 68
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++K S R LPKFETEV+VFRKDSRKLPIGDPD+DWEETVYLN+IIHQF+YT
Sbjct: 69 DLLFFVRKKHVKGSPRYLPKFETEVDVFRKDSRKLPIGDPDIDWEETVYLNLIIHQFEYT 128
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVLKRHSQKVYASPSRRRMDTKGEVEEMTYP +CF VDNF+EVFHD
Sbjct: 129 LTLAICTRTSPKELQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPHICFMVDNFDEVFHD 188
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIF 273
ILVRDGEMVCVELVASDRAG+V+ VIFLGSIRYDALK+VYDAR +S+S K QRM+FG+F
Sbjct: 189 ILVRDGEMVCVELVASDRAGTVQGVIFLGSIRYDALKKVYDARQSSLSTKMAQRMTFGLF 248
Query: 274 SNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDF 333
S S+ R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWDSDWD+DPE+F
Sbjct: 249 STASSQRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWDSDWDEDPEEF 308
Query: 334 YYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRDE 393
Y YR+QRRLSDPSANIN F + WK +K AK SE EGLD + +GV+EIEAGD+RDE
Sbjct: 309 YVYRNQRRLSDPSANINNFVRGGWK---SKLDAKCRSESEGLDCIDNGVSEIEAGDLRDE 365
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/31 (93%), Positives = 31/31 (100%)
Query: 392 DELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
+ELDDGAYNPLWTMRGFTQTFHFWKE+KRAQ
Sbjct: 613 NELDDGAYNPLWTMRGFTQTFHFWKENKRAQ 643
>gi|345487891|ref|XP_001604539.2| PREDICTED: hypothetical protein LOC100120947 [Nasonia vitripennis]
Length = 706
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 264/365 (72%), Positives = 312/365 (85%), Gaps = 4/365 (1%)
Query: 31 GEDESILKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTD 88
G S+ ++ T LEQLLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ +
Sbjct: 6 GSSASLGRAPTMLEQLLEEINFQRTKEMRQLLKDDSGFVMLQGTTYWTDLFVRHFLFQAE 65
Query: 89 SNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMII 148
ID DDLLFFVRKK++KTSSR LPKFETEV+VFRKDS+KLPIGDPD+DWEETVYLN+++
Sbjct: 66 HTIDGDDLLFFVRKKHVKTSSRYLPKFETEVDVFRKDSKKLPIGDPDIDWEETVYLNLVV 125
Query: 149 HQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNF 208
HQFDYTLTLAICTRTSPK LQVL+RHSQKVYASPSRRRMD KG++EEMTYP +CF VDNF
Sbjct: 126 HQFDYTLTLAICTRTSPKELQVLRRHSQKVYASPSRRRMDAKGDLEEMTYPHICFMVDNF 185
Query: 209 NEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRM 268
+EVF DILVRDGEMVCVELVASDR G+V+ VIFLGSIRYDALK+VYDAR+S+S K QRM
Sbjct: 186 DEVFCDILVRDGEMVCVELVASDREGTVQGVIFLGSIRYDALKKVYDARSSLSTKVAQRM 245
Query: 269 SFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETD-MWDSDWD 327
+FG+FS ++ R+EFV+MKGPQGKG AEMAVTKPKG G ETPTSEPGYC TD +WD++W
Sbjct: 246 TFGLFSGATSQRVEFVRMKGPQGKGHAEMAVTKPKGSGAETPTSEPGYCATDALWDAEW- 304
Query: 328 DDPEDFYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEA 387
DD E+ + YRHQRRLSDPSAN+N F + W+ + KA SE+EGLDS+A+G++EIEA
Sbjct: 305 DDAEELFMYRHQRRLSDPSANLNNFVRGGWRTKPDGAATKARSENEGLDSMANGLSEIEA 364
Query: 388 GDMRD 392
GD+RD
Sbjct: 365 GDVRD 369
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/30 (96%), Positives = 30/30 (100%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWTMRGFTQTFHFWKE+KRAQ
Sbjct: 644 ELDDGAYNPLWTMRGFTQTFHFWKETKRAQ 673
>gi|328789567|ref|XP_392206.3| PREDICTED: hypothetical protein LOC408669 [Apis mellifera]
Length = 692
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/377 (70%), Positives = 315/377 (83%), Gaps = 9/377 (2%)
Query: 35 SILKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNID 92
+ + T LEQLLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ + ID
Sbjct: 11 GLARPPTMLEQLLEEINFQRTKELRQMLKDDSGFVILQGTTYWTDLFVRHFLFQAEHTID 70
Query: 93 CDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFD 152
DDLLFFVRKK++KTSSR LPKFETEV+VFRKDS+KLPIGDPD+DWEETVYLN+++HQFD
Sbjct: 71 GDDLLFFVRKKHVKTSSRYLPKFETEVDVFRKDSKKLPIGDPDIDWEETVYLNLVVHQFD 130
Query: 153 YTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVF 212
YTLTLAICTRTSPK LQVL+RHSQKVYASPSRRRMD KG++EEMTYP +CF VDNF+EVF
Sbjct: 131 YTLTLAICTRTSPKELQVLRRHSQKVYASPSRRRMDAKGDLEEMTYPHICFMVDNFDEVF 190
Query: 213 HDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
DILVRDGEMVCVELVASDR G+++ VIFLGSIRYDALK+VYDAR+S+S K QRM+FG+
Sbjct: 191 CDILVRDGEMVCVELVASDREGAIQGVIFLGSIRYDALKKVYDARSSLSTKMAQRMTFGL 250
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETD-MWDSDWDDDPE 331
FS ++ RIEFV+MKGP+GKG AEMAVTKPKG G ETPTSEPGYC TD +WD+DW DD E
Sbjct: 251 FSGAASQRIEFVRMKGPRGKGHAEMAVTKPKGSGAETPTSEPGYCATDSLWDADW-DDAE 309
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMR 391
+ + YRHQRRLSDPSAN+N F + W+ + KA SE+EGLDS+A+G+ EIEAGD+R
Sbjct: 310 ELFLYRHQRRLSDPSANLNNFVRGGWRTKPDTAATKARSENEGLDSMANGLNEIEAGDVR 369
Query: 392 D-ELDDGAYNPLWTMRG 407
D +L D + W RG
Sbjct: 370 DADLQDSS----WGGRG 382
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/30 (93%), Positives = 30/30 (100%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWTMRGFTQTFHFWKE++RAQ
Sbjct: 630 ELDDGAYNPLWTMRGFTQTFHFWKETRRAQ 659
>gi|340710383|ref|XP_003393771.1| PREDICTED: hypothetical protein LOC100647836 [Bombus terrestris]
gi|350415534|ref|XP_003490673.1| PREDICTED: hypothetical protein LOC100743471 [Bombus impatiens]
Length = 684
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/377 (70%), Positives = 315/377 (83%), Gaps = 9/377 (2%)
Query: 35 SILKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNID 92
+ + T LEQLLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ + ID
Sbjct: 11 GLTRPPTMLEQLLEEINFQRTKELRQMLKDDSGFVILQGTTYWTDLFVRHFLFQAEHTID 70
Query: 93 CDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFD 152
DDLLFFVRKK++KTSSR LPKFETEV+VFRKDS+KLPIGDPD+DWEETVYLN+++HQFD
Sbjct: 71 GDDLLFFVRKKHVKTSSRYLPKFETEVDVFRKDSKKLPIGDPDIDWEETVYLNLVVHQFD 130
Query: 153 YTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVF 212
YTLTLAICTRTSPK LQVL+RHSQKVYASPSRRRMD KG++EEMTYP +CF VDNF+EVF
Sbjct: 131 YTLTLAICTRTSPKELQVLRRHSQKVYASPSRRRMDAKGDLEEMTYPHICFMVDNFDEVF 190
Query: 213 HDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
DILVRDGEMVCVELVASDR G+++ VIFLGSIRYDALK+VYDAR+S+S K QRM+FG+
Sbjct: 191 CDILVRDGEMVCVELVASDREGAIQGVIFLGSIRYDALKKVYDARSSLSTKMAQRMTFGL 250
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETD-MWDSDWDDDPE 331
FS ++ RIEFV+MKGP+GKG AEMAVTKPKG G ETPTSEPGYC TD +WD+DW DD E
Sbjct: 251 FSGAASQRIEFVRMKGPRGKGHAEMAVTKPKGSGAETPTSEPGYCATDSLWDADW-DDAE 309
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMR 391
+ + YRHQRRLSDPSAN+N F + W+ + KA SE+EGLDS+A+G+ EIEAGD+R
Sbjct: 310 ELFMYRHQRRLSDPSANLNNFVRGGWRTKPDTAATKARSENEGLDSMANGLNEIEAGDVR 369
Query: 392 D-ELDDGAYNPLWTMRG 407
D +L D + W RG
Sbjct: 370 DADLQDSS----WGGRG 382
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/30 (93%), Positives = 30/30 (100%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWTMRGFTQTFHFWKE++RAQ
Sbjct: 622 ELDDGAYNPLWTMRGFTQTFHFWKETRRAQ 651
>gi|383853483|ref|XP_003702252.1| PREDICTED: uncharacterized protein LOC100877391 [Megachile
rotundata]
Length = 689
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/375 (71%), Positives = 313/375 (83%), Gaps = 9/375 (2%)
Query: 37 LKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNIDCD 94
L T LEQLLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ + ID D
Sbjct: 12 LARPTMLEQLLEEINFQRTKELRQMLKDDSGFVVLQGTTYWTDLFVRHFLFQAEHTIDGD 71
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++KTSSR LPKFETEV VFRKDS+KLPIGDPD+DWEETVYLN+++HQFDYT
Sbjct: 72 DLLFFVRKKHVKTSSRYLPKFETEVNVFRKDSKKLPIGDPDIDWEETVYLNLVVHQFDYT 131
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVL+RHSQKVYASPSRRRMD KG++EE+TYP +CF VDNF+EVF D
Sbjct: 132 LTLAICTRTSPKELQVLRRHSQKVYASPSRRRMDAKGDLEEITYPHICFMVDNFDEVFCD 191
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFS 274
ILVRDGEMVCVELVASDR G+++ VIFLGSIRYDALK+VYDAR+S+S K QRM+FG+FS
Sbjct: 192 ILVRDGEMVCVELVASDREGAIQGVIFLGSIRYDALKKVYDARSSLSTKMAQRMTFGLFS 251
Query: 275 NNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETD-MWDSDWDDDPEDF 333
++ RIEFV+MKGP+GKG AEMAVTKPKG G ETPTSEPGYC TD +WD+DW DD E+
Sbjct: 252 GAASQRIEFVRMKGPRGKGHAEMAVTKPKGSGAETPTSEPGYCATDSLWDADW-DDAEEL 310
Query: 334 YYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRD- 392
+ YRHQRRLSDPSAN+N F + W+ + KA SE+EGLDS+A+G+ EIEAGD+RD
Sbjct: 311 FMYRHQRRLSDPSANLNNFVRGGWRTKPDTAATKARSENEGLDSMANGLNEIEAGDVRDA 370
Query: 393 ELDDGAYNPLWTMRG 407
+L D + W RG
Sbjct: 371 DLQDSS----WGGRG 381
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/30 (93%), Positives = 30/30 (100%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWTMRGFTQTFHFWKE++RAQ
Sbjct: 627 ELDDGAYNPLWTMRGFTQTFHFWKETRRAQ 656
>gi|157136216|ref|XP_001656778.1| hypothetical protein AaeL_AAEL003445 [Aedes aegypti]
gi|108881046|gb|EAT45271.1| AAEL003445-PA [Aedes aegypti]
Length = 887
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/369 (72%), Positives = 318/369 (86%), Gaps = 11/369 (2%)
Query: 35 SILKST-TTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS-- 89
S+LKS T L+ LLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+
Sbjct: 15 SMLKSPPTALQLLLEEINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEKQH 74
Query: 90 NIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIH 149
+IDCDDLLFFVRKK++K SSR +PK+ETE+EVFRKDSRKLPIGDPDVDWEETVYLN++IH
Sbjct: 75 SIDCDDLLFFVRKKHVKGSSRVMPKYETEIEVFRKDSRKLPIGDPDVDWEETVYLNLVIH 134
Query: 150 QFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFN 209
QFDYTLTLAICTRTSPK LQVL+RHSQKVYASPSRR+MDTKGE EE+TYP +CF VDNF+
Sbjct: 135 QFDYTLTLAICTRTSPKELQVLRRHSQKVYASPSRRKMDTKGESEEITYPHICFMVDNFD 194
Query: 210 EVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRM 268
EVFHDILVRDGEMVCVELVA+DR GSV+ VIFLGSIRYDALK+VYDAR +S+ +K QRM
Sbjct: 195 EVFHDILVRDGEMVCVELVATDRDGSVQGVIFLGSIRYDALKKVYDARQSSLGSKVAQRM 254
Query: 269 SFGIFSNNS-NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWD 327
SFG+FS+ +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWDS+W+
Sbjct: 255 SFGLFSSGGPQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWDSEWE 314
Query: 328 DDPEDFYYYRHQRRLSDPSANINMFAKSIWKGP-VNKTT---AKAVSEDEGLDSLAHGVA 383
+D +++Y YRHQRRLSDPSAN+N F++ W+ N+++ KA SE+EGLD LA+ V+
Sbjct: 315 EDCDEYYNYRHQRRLSDPSANLNNFSRYGWRAKNTNESSYGGTKARSENEGLDCLANEVS 374
Query: 384 EIEAGDMRD 392
EIEAGD+RD
Sbjct: 375 EIEAGDLRD 383
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT +GFTQTFHFWKE++R Q
Sbjct: 825 ELDDGAYNPLWTTKGFTQTFHFWKENRRQQ 854
>gi|170047986|ref|XP_001851482.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870233|gb|EDS33616.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 871
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/370 (73%), Positives = 317/370 (85%), Gaps = 12/370 (3%)
Query: 35 SILKST-TTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS-- 89
++LKS T L+ LLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+
Sbjct: 9 ALLKSPPTALQLLLEEINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEKRH 68
Query: 90 NIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIH 149
IDCDDLLFFVRKK++K SSR +PK+ETE+EVFRKDSRKLPIGDPDVDWEETVYLN++IH
Sbjct: 69 TIDCDDLLFFVRKKHVKGSSRVMPKYETEIEVFRKDSRKLPIGDPDVDWEETVYLNLVIH 128
Query: 150 QFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFN 209
QFDYTLTLAICTRTSPK LQVL+RHSQKVYASPSRR+MDTKGE EE+TYP +CF VDNF+
Sbjct: 129 QFDYTLTLAICTRTSPKELQVLRRHSQKVYASPSRRKMDTKGESEEITYPHICFMVDNFD 188
Query: 210 EVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRM 268
EVFHDILVRDGEMVCVELVASDR GSV+ VIFLGSIRYDALK+VYDAR +S+S K QRM
Sbjct: 189 EVFHDILVRDGEMVCVELVASDRDGSVQGVIFLGSIRYDALKKVYDARQSSLSTKVAQRM 248
Query: 269 SFGIFSNNSNS-RIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWD 327
SFG+FS+ S R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWDS+W+
Sbjct: 249 SFGLFSSGGPSTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWDSEWE 308
Query: 328 DDPEDFYYYRHQRRLSDPSANINMFAKSIWKGP-VNKTTA----KAVSEDEGLDSLAHGV 382
+D +++Y YRHQRRLSDPSAN+N F++ W+ N +++ KA SE+EGLD LA+ V
Sbjct: 309 EDCDEYYNYRHQRRLSDPSANLNNFSRYGWRTKNANDSSSYGGTKARSENEGLDCLANEV 368
Query: 383 AEIEAGDMRD 392
+EIEAGD+RD
Sbjct: 369 SEIEAGDLRD 378
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 391 RDELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
+ ELDDGAYNPLWT +GFTQTFHFWKE++R Q
Sbjct: 807 KKELDDGAYNPLWTTKGFTQTFHFWKENRRQQ 838
>gi|158300952|ref|XP_320746.4| AGAP011764-PA [Anopheles gambiae str. PEST]
gi|157013406|gb|EAA00390.4| AGAP011764-PA [Anopheles gambiae str. PEST]
Length = 891
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/376 (71%), Positives = 317/376 (84%), Gaps = 14/376 (3%)
Query: 31 GEDESILKS-TTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQT 87
G ++LKS T L+ LLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ+
Sbjct: 10 GTASALLKSPQTALQLLLEEINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQS 69
Query: 88 D--SNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLN 145
+ +IDCDDLLFFVRKK+IK SSR +P++ETE+EVFRKDSRKLPIGDPDVDWEETVYLN
Sbjct: 70 EPEHSIDCDDLLFFVRKKHIKGSSRAMPRYETEIEVFRKDSRKLPIGDPDVDWEETVYLN 129
Query: 146 MIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTV 205
++IHQF+YTLTLAICTRTSPK LQVL+RHSQKVYASPSRR+MDTKG+ EE+TYP +CF V
Sbjct: 130 LVIHQFNYTLTLAICTRTSPKELQVLRRHSQKVYASPSRRKMDTKGDSEEITYPHICFMV 189
Query: 206 DNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKF 264
DNF+EVFHDILVRDGEMVCVELVA+DR GSV+ VIFLGSIRYDALK+VYDAR +S+ +K
Sbjct: 190 DNFDEVFHDILVRDGEMVCVELVATDRDGSVQGVIFLGSIRYDALKKVYDARQSSLGSKV 249
Query: 265 TQRMSFGIFSNNS-NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWD 323
QRMSFG+FS+ +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD
Sbjct: 250 AQRMSFGLFSSGGPQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD 309
Query: 324 SDWDDDPEDFYYYRHQRRLSDPSANINMFAKSIWK-------GPVNKTTAKAVSEDEGLD 376
S+W++D E++Y YRHQRRLSDPSAN+N F++ W+ G +KA SE+EGLD
Sbjct: 310 SEWEEDCEEYYNYRHQRRLSDPSANLNNFSRYGWRTKNATDPGGSAYGGSKARSENEGLD 369
Query: 377 SLAHGVAEIEAGDMRD 392
LA+ V+EIEAGD+RD
Sbjct: 370 CLANEVSEIEAGDLRD 385
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT +GFTQTFHFWKE++R Q
Sbjct: 829 ELDDGAYNPLWTTKGFTQTFHFWKENRRQQ 858
>gi|312381709|gb|EFR27395.1| hypothetical protein AND_05929 [Anopheles darlingi]
Length = 1503
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/373 (72%), Positives = 316/373 (84%), Gaps = 15/373 (4%)
Query: 36 ILKS-TTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTD--SN 90
+LKS T L+ LLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ++ +
Sbjct: 23 MLKSPQTALQLLLEEINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQSEPEHS 82
Query: 91 IDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQ 150
IDCDDLLFFVRKK+IK SSR +PK+ETE+EVFRKDSRKLPIGDPDVDWEETVYLN++IHQ
Sbjct: 83 IDCDDLLFFVRKKHIKGSSRTMPKYETEIEVFRKDSRKLPIGDPDVDWEETVYLNLVIHQ 142
Query: 151 FDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNE 210
F+YTLTLAICTRTSPK LQVL+RHSQKVYASPSRR+MDTKG+ EE+TYP +CF VDNF+E
Sbjct: 143 FNYTLTLAICTRTSPKELQVLRRHSQKVYASPSRRKMDTKGDSEEITYPHICFMVDNFDE 202
Query: 211 VFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMS 269
VFHDILVRDGEMVCVELVA+DR GSV+ VIFLGSIRYDALKRVYDAR +S+ +K QRMS
Sbjct: 203 VFHDILVRDGEMVCVELVATDRDGSVQGVIFLGSIRYDALKRVYDARQSSLGSKVAQRMS 262
Query: 270 FGIFSNNS-NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDD 328
FG+FS+ +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWDS+W++
Sbjct: 263 FGLFSSGGPQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWDSEWEE 322
Query: 329 DPEDFYYYRHQRRLSDPSANINMFAKSIW--KGPVN------KTTAKAVSEDEGLDSLAH 380
D E++Y YRHQRRLSDPSAN+N F++ W K P +KA SE+EGLD LA+
Sbjct: 323 DCEEYYNYRHQRRLSDPSANLNNFSRYGWRTKNPAEGSCSSSYGGSKARSENEGLDCLAN 382
Query: 381 GVAEIEAGDMRDE 393
V+EIEAGD+RD+
Sbjct: 383 EVSEIEAGDLRDD 395
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT +GFTQTFHFWKE++R Q
Sbjct: 1018 ELDDGAYNPLWTTKGFTQTFHFWKENRRQQ 1047
>gi|195124467|ref|XP_002006714.1| GI21217 [Drosophila mojavensis]
gi|193911782|gb|EDW10649.1| GI21217 [Drosophila mojavensis]
Length = 927
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/381 (70%), Positives = 319/381 (83%), Gaps = 19/381 (4%)
Query: 38 KSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTD--SNIDC 93
K T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID
Sbjct: 12 KPQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDS 71
Query: 94 DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDY 153
DDLLFFVRKK++K+SSR++PK+ETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDY
Sbjct: 72 DDLLFFVRKKHVKSSSRHMPKYETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDY 131
Query: 154 TLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFH 213
TLTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF
Sbjct: 132 TLTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFS 191
Query: 214 DILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGI 272
DILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+
Sbjct: 192 DILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGL 251
Query: 273 FSNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDP 330
FS+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++
Sbjct: 252 FSSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEN 310
Query: 331 EDFYYYRHQRRLSDPSANINMFAKSIWK---------GPVNKTTA--KAVSEDEGLDSLA 379
+D+ YRHQRRLSDPSAN+N F++ W+ G TTA KA SE+EGLDSLA
Sbjct: 311 DDYCTYRHQRRLSDPSANLNNFSRYGWRTKNTNQDMVGSGTSTTAGVKARSENEGLDSLA 370
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 371 SEVSEIEAGDLRDDQQRPAFS 391
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 865 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 894
>gi|195381149|ref|XP_002049317.1| GJ20819 [Drosophila virilis]
gi|194144114|gb|EDW60510.1| GJ20819 [Drosophila virilis]
Length = 909
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/381 (69%), Positives = 318/381 (83%), Gaps = 19/381 (4%)
Query: 38 KSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS--NIDC 93
K T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID
Sbjct: 12 KPQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDS 71
Query: 94 DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDY 153
DDLLFFVRKK++K+SSR++PK+ETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDY
Sbjct: 72 DDLLFFVRKKHVKSSSRHMPKYETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDY 131
Query: 154 TLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFH 213
TLTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF
Sbjct: 132 TLTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFS 191
Query: 214 DILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGI 272
DILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+
Sbjct: 192 DILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGL 251
Query: 273 FSNNSN--SRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDP 330
FS+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++
Sbjct: 252 FSSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEN 310
Query: 331 EDFYYYRHQRRLSDPSANINMFAKSIWK-----------GPVNKTTAKAVSEDEGLDSLA 379
+D+ YRHQRRLSDPSAN+N F++ W+ G AKA SE+EGLD+LA
Sbjct: 311 DDYCTYRHQRRLSDPSANLNNFSRYGWRTKNTNQDMVSSGTSASAGAKARSENEGLDTLA 370
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
+ V+EIEAGD+RD+ A++
Sbjct: 371 NEVSEIEAGDLRDDQQRPAFS 391
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 847 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 876
>gi|198457553|ref|XP_001360710.2| GA21937 [Drosophila pseudoobscura pseudoobscura]
gi|198136018|gb|EAL25285.2| GA21937 [Drosophila pseudoobscura pseudoobscura]
Length = 892
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/379 (69%), Positives = 317/379 (83%), Gaps = 20/379 (5%)
Query: 41 TTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTD--SNIDCDDL 96
T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID DDL
Sbjct: 16 TPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPEHSIDSDDL 75
Query: 97 LFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYTLT 156
LFFVRKK++K+SSR++PK+ETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYTLT
Sbjct: 76 LFFVRKKHVKSSSRHMPKYETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYTLT 135
Query: 157 LAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDIL 216
LAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF DIL
Sbjct: 136 LAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSDIL 195
Query: 217 VRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIFSN 275
VRDGEMVCVELVA+D+ GSV+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+FS+
Sbjct: 196 VRDGEMVCVELVANDKDGSVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLFSS 255
Query: 276 NS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDF 333
+ +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +D+
Sbjct: 256 GAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEENDDY 314
Query: 334 YYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLAHG 381
YRHQRRLSDPSAN+N F++ W+ G + AKA SE+EGLDSLA
Sbjct: 315 CTYRHQRRLSDPSANLNNFSRYGWRTKNANAQDMVGSGTSSNVGAKARSENEGLDSLASE 374
Query: 382 VAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 375 VSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 830 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 859
>gi|24654329|ref|NP_611183.1| CG9646 [Drosophila melanogaster]
gi|7302838|gb|AAF57912.1| CG9646 [Drosophila melanogaster]
Length = 889
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/381 (69%), Positives = 317/381 (83%), Gaps = 20/381 (5%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS--NIDCD 94
S T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID D
Sbjct: 14 SQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDSD 73
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++K+SSR++PKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYT
Sbjct: 74 DLLFFVRKKHVKSSSRHMPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYT 133
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF D
Sbjct: 134 LTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSD 193
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIF 273
ILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+F
Sbjct: 194 ILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLF 253
Query: 274 SNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPE 331
S+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +
Sbjct: 254 SSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEND 312
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLA 379
D+ YRHQRRLSDPSAN+N F++ W+ G AKA SE+EGLDSLA
Sbjct: 313 DYCTYRHQRRLSDPSANLNNFSRYGWRTKNSNNQDMVGSGTSPSVGAKARSENEGLDSLA 372
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 373 SEVSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 827 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 856
>gi|195335123|ref|XP_002034225.1| GM21752 [Drosophila sechellia]
gi|194126195|gb|EDW48238.1| GM21752 [Drosophila sechellia]
Length = 889
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/381 (69%), Positives = 317/381 (83%), Gaps = 20/381 (5%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS--NIDCD 94
S T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID D
Sbjct: 14 SQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDSD 73
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++K+SSR++PKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYT
Sbjct: 74 DLLFFVRKKHVKSSSRHMPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYT 133
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF D
Sbjct: 134 LTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSD 193
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIF 273
ILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+F
Sbjct: 194 ILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLF 253
Query: 274 SNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPE 331
S+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +
Sbjct: 254 SSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEND 312
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLA 379
D+ YRHQRRLSDPSAN+N F++ W+ G AKA SE+EGLDSLA
Sbjct: 313 DYCTYRHQRRLSDPSANLNNFSRYGWRTKNSNNQDMVGSGNSPSVGAKARSENEGLDSLA 372
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 373 SEVSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 827 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 856
>gi|21428746|gb|AAM50033.1| SD21944p [Drosophila melanogaster]
Length = 889
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/381 (69%), Positives = 317/381 (83%), Gaps = 20/381 (5%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS--NIDCD 94
S T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID D
Sbjct: 14 SQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPMHSIDSD 73
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++K+SSR++PKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYT
Sbjct: 74 DLLFFVRKKHVKSSSRHMPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYT 133
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF D
Sbjct: 134 LTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSD 193
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIF 273
ILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+F
Sbjct: 194 ILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLF 253
Query: 274 SNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPE 331
S+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +
Sbjct: 254 SSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEND 312
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLA 379
D+ YRHQRRLSDPSAN+N F++ W+ G AKA SE+EGLDSLA
Sbjct: 313 DYCTYRHQRRLSDPSANLNNFSRYGWRTKNSNNQDMVGSGTSPSVGAKARSENEGLDSLA 372
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 373 SEVSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 827 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 856
>gi|195150761|ref|XP_002016319.1| GL11518 [Drosophila persimilis]
gi|194110166|gb|EDW32209.1| GL11518 [Drosophila persimilis]
Length = 892
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/379 (69%), Positives = 317/379 (83%), Gaps = 20/379 (5%)
Query: 41 TTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS--NIDCDDL 96
T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID DDL
Sbjct: 16 TPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPEHSIDSDDL 75
Query: 97 LFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYTLT 156
LFFVRKK++K+SSR++PK+ETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYTLT
Sbjct: 76 LFFVRKKHVKSSSRHMPKYETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYTLT 135
Query: 157 LAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDIL 216
LAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF DIL
Sbjct: 136 LAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSDIL 195
Query: 217 VRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIFSN 275
VRDGEMVCVELVA+D+ GSV+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+FS+
Sbjct: 196 VRDGEMVCVELVANDKDGSVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLFSS 255
Query: 276 NS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDF 333
+ +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +D+
Sbjct: 256 GAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEENDDY 314
Query: 334 YYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLAHG 381
YRHQRRLSDPSAN+N F++ W+ G + AKA SE+EGLDSLA
Sbjct: 315 CTYRHQRRLSDPSANLNNFSRYGWRTKNANAQDMVGSGTSSNVGAKARSENEGLDSLASE 374
Query: 382 VAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 375 VSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 830 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 859
>gi|195488847|ref|XP_002092486.1| GE11641 [Drosophila yakuba]
gi|194178587|gb|EDW92198.1| GE11641 [Drosophila yakuba]
Length = 889
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/381 (69%), Positives = 317/381 (83%), Gaps = 20/381 (5%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS--NIDCD 94
S T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID D
Sbjct: 14 SQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDSD 73
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++K+SSR++PKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYT
Sbjct: 74 DLLFFVRKKHVKSSSRHMPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYT 133
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF D
Sbjct: 134 LTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSD 193
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIF 273
ILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+F
Sbjct: 194 ILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLF 253
Query: 274 SNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPE 331
S+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +
Sbjct: 254 SSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEND 312
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLA 379
D+ YRHQRRLSDPSAN+N F++ W+ G AKA SE+EGLDSLA
Sbjct: 313 DYCTYRHQRRLSDPSANLNNFSRYGWRTKNSNNQDMVGSGTSPSVGAKARSENEGLDSLA 372
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 373 SEVSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 827 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 856
>gi|194756632|ref|XP_001960580.1| GF11434 [Drosophila ananassae]
gi|190621878|gb|EDV37402.1| GF11434 [Drosophila ananassae]
Length = 891
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/381 (69%), Positives = 317/381 (83%), Gaps = 20/381 (5%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTD--SNIDCD 94
S T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID D
Sbjct: 14 SQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDSD 73
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++K+SSR++PKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYT
Sbjct: 74 DLLFFVRKKHVKSSSRHMPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYT 133
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF D
Sbjct: 134 LTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSD 193
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIF 273
ILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+F
Sbjct: 194 ILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLF 253
Query: 274 SNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPE 331
S+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +
Sbjct: 254 SSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEND 312
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLA 379
D+ YRHQRRLSDPSAN+N F++ W+ G AKA SE+EGLDSLA
Sbjct: 313 DYCTYRHQRRLSDPSANLNNFSRYGWRTKNSNNPDMVGSGTSPSVGAKARSENEGLDSLA 372
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 373 SEVSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 829 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 858
>gi|195584112|ref|XP_002081859.1| GD11243 [Drosophila simulans]
gi|194193868|gb|EDX07444.1| GD11243 [Drosophila simulans]
Length = 888
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/381 (69%), Positives = 317/381 (83%), Gaps = 20/381 (5%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTD--SNIDCD 94
S T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID D
Sbjct: 14 SQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDSD 73
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++K+SSR++PKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYT
Sbjct: 74 DLLFFVRKKHVKSSSRHMPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYT 133
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF D
Sbjct: 134 LTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSD 193
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIF 273
ILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+F
Sbjct: 194 ILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLF 253
Query: 274 SNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPE 331
S+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +
Sbjct: 254 SSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEND 312
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLA 379
D+ YRHQRRLSDPSAN+N F++ W+ G AKA SE+EGLDSLA
Sbjct: 313 DYCTYRHQRRLSDPSANLNNFSRYGWRTKNSNNQDMVGSGTSPSVGAKARSENEGLDSLA 372
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 373 SEVSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 826 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 855
>gi|195056331|ref|XP_001995064.1| GH22838 [Drosophila grimshawi]
gi|193899270|gb|EDV98136.1| GH22838 [Drosophila grimshawi]
Length = 910
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/381 (69%), Positives = 318/381 (83%), Gaps = 19/381 (4%)
Query: 38 KSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS--NIDC 93
K T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID
Sbjct: 12 KPQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDS 71
Query: 94 DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDY 153
DDLLFFVRKK++K+SSR++PK+ETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDY
Sbjct: 72 DDLLFFVRKKHVKSSSRHMPKYETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDY 131
Query: 154 TLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFH 213
TLTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF
Sbjct: 132 TLTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFS 191
Query: 214 DILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGI 272
DILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+
Sbjct: 192 DILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGL 251
Query: 273 FSNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDP 330
FS+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++
Sbjct: 252 FSSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEN 310
Query: 331 EDFYYYRHQRRLSDPSANINMFAKSIWK-----------GPVNKTTAKAVSEDEGLDSLA 379
+D+ YRHQRRLSDPSAN+N F++ W+ G + AKA SE+EGLDSLA
Sbjct: 311 DDYCTYRHQRRLSDPSANLNNFSRYGWRTKNTGQDMVTSGTSSSAGAKARSENEGLDSLA 370
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 371 SEVSEIEAGDLRDDQQRPAFS 391
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 848 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 877
>gi|307207314|gb|EFN85064.1| Uncharacterized protein C22orf9-like protein [Harpegnathos
saltator]
Length = 715
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/360 (71%), Positives = 304/360 (84%), Gaps = 2/360 (0%)
Query: 35 SILKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNID 92
+ ++ T LEQLLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ + ID
Sbjct: 11 GLTRAPTMLEQLLEEINFQRTKELRQMLKDDSGFVVLQGTTYWTDLFVRHFLFQAEHTID 70
Query: 93 CDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFD 152
DDLLFFVRKK++KTSSR LPKFETEV+VFRKDS+KLPIGDPD+DWEETVYLN+++HQFD
Sbjct: 71 GDDLLFFVRKKHVKTSSRYLPKFETEVDVFRKDSKKLPIGDPDIDWEETVYLNLVVHQFD 130
Query: 153 YTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVF 212
YTLTLAICTRTSPK LQVL+RHSQKVYASPSRRRMD KG++EEMTYP +CF VDNF+EVF
Sbjct: 131 YTLTLAICTRTSPKELQVLRRHSQKVYASPSRRRMDAKGDLEEMTYPHICFMVDNFDEVF 190
Query: 213 HDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
DILVRDGEMVCVELVASDR G+V+ VIFLGSIRYDALK+VYDAR+S+S K QRM+FG+
Sbjct: 191 CDILVRDGEMVCVELVASDREGAVQGVIFLGSIRYDALKKVYDARSSLSTKMAQRMTFGL 250
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPED 332
FS ++ RIEFV+MKGP+GKG AEMAVTKPKG G ETPTSEPGYC TD DD E+
Sbjct: 251 FSGAASQRIEFVRMKGPRGKGHAEMAVTKPKGSGAETPTSEPGYCATDALWDADWDDAEE 310
Query: 333 FYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRD 392
+ YRHQRRLSDPSAN+N F + W+ + KA SE+EGLDS+A+G++EIEAGD+RD
Sbjct: 311 LFMYRHQRRLSDPSANLNNFVRGGWRTKPDTAATKARSENEGLDSMANGLSEIEAGDVRD 370
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/30 (96%), Positives = 30/30 (100%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWTMRGFTQTFHFWKE+KRAQ
Sbjct: 653 ELDDGAYNPLWTMRGFTQTFHFWKETKRAQ 682
>gi|194882333|ref|XP_001975266.1| GG20656 [Drosophila erecta]
gi|190658453|gb|EDV55666.1| GG20656 [Drosophila erecta]
Length = 890
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/381 (69%), Positives = 315/381 (82%), Gaps = 20/381 (5%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDS--NIDCD 94
S T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+ +ID D
Sbjct: 14 SQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDSD 73
Query: 95 DLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYT 154
DLLFFVRKK++K+SSR +PKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IHQFDYT
Sbjct: 74 DLLFFVRKKHVKSSSRQMPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIHQFDYT 133
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+EVF D
Sbjct: 134 LTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFDEVFSD 193
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFGIF 273
ILVRDGEMVCVELVA+D+ G+V+ VIFLGSIRYDALK+VYDAR +S+S+K QRMSFG+F
Sbjct: 194 ILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRMSFGLF 253
Query: 274 SNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPE 331
S+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W+++ +
Sbjct: 254 SSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EWEEEND 312
Query: 332 DFYYYRHQRRLSDPSANINMFAKSIWK------------GPVNKTTAKAVSEDEGLDSLA 379
D+ YRHQRRLSDPSAN+N F++ W+ G KA SE+EGLDSLA
Sbjct: 313 DYCTYRHQRRLSDPSANLNNFSRYGWRTKNSNNQDMVGSGTSPSVGVKARSENEGLDSLA 372
Query: 380 HGVAEIEAGDMRDELDDGAYN 400
V+EIEAGD+RD+ A++
Sbjct: 373 SEVSEIEAGDLRDDQQRPAFS 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 828 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 857
>gi|332024598|gb|EGI64796.1| Uncharacterized protein C22orf9-like protein [Acromyrmex
echinatior]
Length = 710
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/360 (71%), Positives = 305/360 (84%), Gaps = 3/360 (0%)
Query: 35 SILKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNID 92
+ ++ T LEQLLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ + ID
Sbjct: 12 GLTRAPTMLEQLLEEINFQRTKELRQMLKDDSGFVVLQGTTYWTDLFVRHFLFQAEHAID 71
Query: 93 CDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFD 152
DDLLFFVRKK++KTSSR LPKFETEV+VFRKDS+KLPIGDPD+DWEETVYLN+++HQFD
Sbjct: 72 GDDLLFFVRKKHVKTSSRYLPKFETEVDVFRKDSKKLPIGDPDIDWEETVYLNLVVHQFD 131
Query: 153 YTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVF 212
YTLTLAICTRTSPK LQVL+RHSQKVYASPSRRRMD KG++EEMTYP +CF VDNF+EVF
Sbjct: 132 YTLTLAICTRTSPKELQVLRRHSQKVYASPSRRRMDAKGDLEEMTYPHICFMVDNFDEVF 191
Query: 213 HDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
DILVRDGEMVCVELVASDR G+++ VIFLGSIRYDALK+VYDAR+S+S K QRM+FG+
Sbjct: 192 CDILVRDGEMVCVELVASDREGAIQGVIFLGSIRYDALKKVYDARSSLSTKMAQRMTFGL 251
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPED 332
FS ++ R+EFV+MKGP+GKG AEMAVTKPKG G ETPTSEPGYC TD+ DD E+
Sbjct: 252 FSGAASQRVEFVRMKGPRGKGHAEMAVTKPKGSGAETPTSEPGYCATDL-WDADWDDAEE 310
Query: 333 FYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRD 392
+ YRHQRRLSDPSAN+N F + W+ + KA SE+EGLDS+A+G++EIEAGD+RD
Sbjct: 311 LFMYRHQRRLSDPSANLNNFVRGGWRTKPDTVATKARSENEGLDSMANGLSEIEAGDVRD 370
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/30 (96%), Positives = 30/30 (100%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWTMRGFTQTFHFWKE+KRAQ
Sbjct: 648 ELDDGAYNPLWTMRGFTQTFHFWKETKRAQ 677
>gi|307167593|gb|EFN61137.1| Uncharacterized protein C22orf9-like protein [Camponotus
floridanus]
Length = 712
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/360 (71%), Positives = 304/360 (84%), Gaps = 3/360 (0%)
Query: 35 SILKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNID 92
+ ++ T LEQLLEEINFQR KE RQ L++D + QGT+YWTDLFVR+FLFQ + ID
Sbjct: 12 GLTRAPTMLEQLLEEINFQRTKELRQMLKDDSGFVVLQGTTYWTDLFVRHFLFQAEHAID 71
Query: 93 CDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFD 152
DDLLFFVRKK++KTSSR LPKFETEV+VFRKDS+KLPIGDPD+DWEETVYLN+++HQFD
Sbjct: 72 GDDLLFFVRKKHVKTSSRYLPKFETEVDVFRKDSKKLPIGDPDIDWEETVYLNLVVHQFD 131
Query: 153 YTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVF 212
YTLTLAICTRTSPK LQVL+RHSQKVYASPSRRRMD KG++EEMTYP +CF VDNF+EVF
Sbjct: 132 YTLTLAICTRTSPKELQVLRRHSQKVYASPSRRRMDAKGDLEEMTYPHICFMVDNFDEVF 191
Query: 213 HDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
DILVRDGEMVCVELVASDR G+++ VIFLGSIRYDALK+VYDAR+S+S K QRM+FG+
Sbjct: 192 CDILVRDGEMVCVELVASDREGAIQGVIFLGSIRYDALKKVYDARSSLSTKMAQRMTFGL 251
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPED 332
FS ++ RIEFV+MKGP+GKG AEMAVTKPKG G ETPTSEPGYC TD+ DD E+
Sbjct: 252 FSGAASQRIEFVRMKGPRGKGHAEMAVTKPKGSGAETPTSEPGYCATDL-WDADWDDAEE 310
Query: 333 FYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRD 392
+ YRHQRRLSDPSAN+N F + W+ + KA SE+EGLDS+A+G+ EIEAGD+RD
Sbjct: 311 LFMYRHQRRLSDPSANLNNFVRGGWRTKPDTVATKARSENEGLDSMANGLNEIEAGDVRD 370
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/30 (96%), Positives = 30/30 (100%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWTMRGFTQTFHFWKE+KRAQ
Sbjct: 650 ELDDGAYNPLWTMRGFTQTFHFWKETKRAQ 679
>gi|195441981|ref|XP_002068739.1| GK17865 [Drosophila willistoni]
gi|194164824|gb|EDW79725.1| GK17865 [Drosophila willistoni]
Length = 898
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/388 (69%), Positives = 323/388 (83%), Gaps = 23/388 (5%)
Query: 35 SILK-STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTD--S 89
++LK S T L+QLLE+INFQR KE RQ L++D + QGT+YWTDLFVR+FLFQT+
Sbjct: 9 ALLKGSQTALQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYWTDLFVRHFLFQTEPQH 68
Query: 90 NIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIH 149
+ID DDLLFFVRKK++K+SSR++PK+ETEVEVFRKDSRKLPIGDPDVDWEETVYLNM+IH
Sbjct: 69 SIDSDDLLFFVRKKHVKSSSRHMPKYETEVEVFRKDSRKLPIGDPDVDWEETVYLNMVIH 128
Query: 150 QFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFN 209
QFDYTLTLAICTRTSPK LQVL+RHSQ+VYASPSRR+MDTKGE EE+TYP +CF VDNF+
Sbjct: 129 QFDYTLTLAICTRTSPKELQVLRRHSQRVYASPSRRKMDTKGEGEEITYPHICFMVDNFD 188
Query: 210 EVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRM 268
EVF DILVRDGEMVCVELVA+D+ GSV+ VIFLGSIRYDALK+VYDAR +S+S+K QRM
Sbjct: 189 EVFSDILVRDGEMVCVELVANDKDGSVQGVIFLGSIRYDALKKVYDARQSSLSSKVAQRM 248
Query: 269 SFGIFSNNS--NSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDW 326
SFG+FS+ + +R EFV+MKGPQGKG AEMAVTKPKG GVETPTSEPG+C TDMWD +W
Sbjct: 249 SFGLFSSGAGVQTRCEFVRMKGPQGKGHAEMAVTKPKGSGVETPTSEPGFCATDMWD-EW 307
Query: 327 DDDPEDFYYYRHQRRLSDPSANINMFAKSIWKGP-VNK-------------TTAKAVSED 372
D++ +D+ YRHQRRLSDPSAN+N F++ W+ VN AKA SE+
Sbjct: 308 DEENDDYCTYRHQRRLSDPSANLNNFSRYGWRTKNVNNPQDMVGSGTSSSSAAAKARSEN 367
Query: 373 EGLDSLAHGVAEIEAGDMRDELDDGAYN 400
EGLDSLA+ V+EIEAGD+RD+ A++
Sbjct: 368 EGLDSLANEVSEIEAGDLRDDQKRPAFS 395
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
ELDDGAYNPLWT RGFTQ+FHFWKE++R Q
Sbjct: 836 ELDDGAYNPLWTSRGFTQSFHFWKENRRQQ 865
>gi|357613729|gb|EHJ68688.1| hypothetical protein KGM_13289 [Danaus plexippus]
Length = 627
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/361 (67%), Positives = 298/361 (82%), Gaps = 8/361 (2%)
Query: 35 SILKSTTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNID 92
+ L++ T LEQLLEEINFQR KE RQ +++D + QGT+YWTDLFVR+FLFQ + +ID
Sbjct: 7 TFLQNATMLEQLLEEINFQRTKEMRQLMKDDSGFVVLQGTTYWTDLFVRHFLFQEEQSID 66
Query: 93 CDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFD 152
CDDLLFFVRK+++K SSR LPK+ET+VEVFRKDS+KLPIGDP++DWEETVYLN+I+HQFD
Sbjct: 67 CDDLLFFVRKRHVKGSSRYLPKYETDVEVFRKDSKKLPIGDPEIDWEETVYLNLIVHQFD 126
Query: 153 YTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVF 212
YTLTLAICTRTSPK LQVLKRHSQKVYASPSRR+MDTKGE EEMTYP +CF VDNF+EVF
Sbjct: 127 YTLTLAICTRTSPKELQVLKRHSQKVYASPSRRKMDTKGEGEEMTYPHICFMVDNFDEVF 186
Query: 213 HDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDAR-TSVSNKFTQRMSFG 271
DI+VRDGEMVCVELVA R G+ ++VIFLGSIRYDAL RVYDAR +S+S K QRMSFG
Sbjct: 187 CDIVVRDGEMVCVELVARGRGGAAQAVIFLGSIRYDALTRVYDARQSSLSTKVAQRMSFG 246
Query: 272 IFSNNSN--SRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDD 329
+ + +R EFV+MKGP GKG AE+AV++ + GV TP SEPG ++WDSD++DD
Sbjct: 247 LLGRGAGAAARCEFVRMKGPGGKGHAEVAVSRARSSGVHTPCSEPGL-GPELWDSDFEDD 305
Query: 330 PEDFYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGD 389
P++ + YRHQRRLSDPSAN+N F + W+ T++ SE+EGLD+LA G+AE+EAGD
Sbjct: 306 PDELFLYRHQRRLSDPSANLNHFVRGGWRARDKDDTSR--SENEGLDALADGLAEVEAGD 363
Query: 390 M 390
+
Sbjct: 364 L 364
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 393 ELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMS--SENWTSIS 439
ELDDGAYNPLW MRGFTQTFH WKE +R Q F++ + W SI+
Sbjct: 565 ELDDGAYNPLWAMRGFTQTFHLWKEGRRQQSAPLCAFLTYVTLPWWSIA 613
>gi|321476188|gb|EFX87149.1| hypothetical protein DAPPUDRAFT_312713 [Daphnia pulex]
Length = 488
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/438 (57%), Positives = 310/438 (70%), Gaps = 53/438 (12%)
Query: 38 KSTTTLEQLLEEINFQRAKEKRQYLR--NDMFLTQGTSYWTDLFVRYFLFQTDSNIDCDD 95
+S LEQLLEE+NFQR KE+R+Y+R +D L GT YWTDLFVR+FLF++D +ID DD
Sbjct: 18 RSPNALEQLLEEVNFQRRKERRKYVREDSDFVLLHGTPYWTDLFVRHFLFESDQSIDADD 77
Query: 96 LLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYTL 155
LLFFVRKK IK S+R L KFETEVEVFR+DS+KLPIGDPDV WEET+YLN+IIHQFDY L
Sbjct: 78 LLFFVRKKLIKGSTRFLMKFETEVEVFRRDSKKLPIGDPDVAWEETLYLNLIIHQFDYML 137
Query: 156 TLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDI 215
TLA+CTRTSPK LQVLKRH Q+VYASPSRRRMD KG++EE+TYP +CF VDNF+EV+ D+
Sbjct: 138 TLAVCTRTSPKDLQVLKRHCQRVYASPSRRRMDVKGDLEEITYPNICFMVDNFDEVYEDM 197
Query: 216 LVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSN 275
LVRDGEMVCVELVA++R G + V+FLGSIRY+ALK+VYD+R S+ + Q+ S G+++
Sbjct: 198 LVRDGEMVCVELVATNRRGVPQGVLFLGSIRYEALKKVYDSRASLGTRVAQKFSMGLWNG 257
Query: 276 NSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDFYY 335
S R+EFV+MKGPQGKG +EMAVTKPK G++TP SEPG+ T++WD++WD +PED
Sbjct: 258 ASTHRMEFVRMKGPQGKGHSEMAVTKPKSSGLDTPCSEPGFSATELWDAEWDSEPEDLCS 317
Query: 336 YRHQRRLSDPSANI---NMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRD 392
QRRLS+PS + N + +N TT + SE+EGLD + EIEAGD+RD
Sbjct: 318 NTRQRRLSEPSGGMPISNRCQRPNTSHQMNGTTNMSRSENEGLDKCNNTWNEIEAGDVRD 377
Query: 393 ------------------------------------------------ELDDGAYNPLWT 404
ELDDG NPLWT
Sbjct: 378 GMLAEEPESTDVPGRKTGATFKQLVDGNRVHFLDGQSARSSEPAGPRTELDDGVCNPLWT 437
Query: 405 MRGFTQTFHFWKESKRAQ 422
M+GFTQTFH+ KES+RAQ
Sbjct: 438 MKGFTQTFHYLKESRRAQ 455
>gi|405978767|gb|EKC43130.1| Uncharacterized protein C22orf9-like protein [Crassostrea gigas]
Length = 391
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 228/357 (63%), Gaps = 14/357 (3%)
Query: 68 LTQGTSYWTDLFVRYFLFQTDSNIDC-DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDS 126
+ TS+WTD+F +YF+ + D DD+LF+VRK + F E+EV+R+DS
Sbjct: 1 MNDSTSFWTDIFTKYFIDPSKLPDDQRDDMLFYVRKTH--NPKNKSFTFRPEIEVYRRDS 58
Query: 127 RKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRR 185
+ LP + D +DWEETVY+N+I HQ YT T A+CTRTS HLQ+L++ SQ+VY SPS+R
Sbjct: 59 KSLPALEDKTIDWEETVYMNIISHQLVYTATCAVCTRTSEHHLQILRKFSQRVYPSPSKR 118
Query: 186 RMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSI 245
RMD KG EE+TYP + FTVDNF E F DI+VRDGE+V VEL ASDR G + VIFLG++
Sbjct: 119 RMDDKGTEEELTYPNIYFTVDNFEEAFGDIVVRDGELVSVELTASDRHGRAQGVIFLGAV 178
Query: 246 RYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGY 305
RY+ LK+VYDAR S+++K Q MS G+ N R+EFV+M+GP+ KG AE+AV++ G
Sbjct: 179 RYEVLKKVYDARLSLTSKMMQTMSLGMIKQ--NKRVEFVRMRGPKSKGHAEIAVSRVPGS 236
Query: 306 GVETPTSEPGYCETDMWDSDWDDDPEDFYYYRHQRRLSDPSANINMFAKSIWKGPVNK-T 364
G ETP E E ++ + DP Y H RR+SDPS + + S+ +G + + +
Sbjct: 237 GPETPNKENFKLED--FNDEQAQDPNQQNQYTH-RRMSDPSESFS----SLVRGGIRRLS 289
Query: 365 TAKAVSEDEGLDSLAHGVAEIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRA 421
K+ SE E +++ E+EA ++ EL+ + + + F Q + +KE KRA
Sbjct: 290 MKKSRSETEDVNAGIVNCQEVEATTLQSELEQSTHANGFLGKAFGQAWMLFKEQKRA 346
>gi|156402794|ref|XP_001639775.1| predicted protein [Nematostella vectensis]
gi|156226905|gb|EDO47712.1| predicted protein [Nematostella vectensis]
Length = 232
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 171/230 (74%), Gaps = 7/230 (3%)
Query: 73 SYWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-I 131
S+WT LF +YF+++ D + DDLLF+V K S R ++E+ VFRKD++ LP +
Sbjct: 9 SFWTRLFSQYFIYKHDDS--RDDLLFYV--KSAAPSKRGKDSSKSEILVFRKDTKNLPSL 64
Query: 132 GDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKG 191
GDPD+DWEETVYLN+I+HQF+YTLT A+CT+ K L++L+R SQ+VYA+PSRRRMD+KG
Sbjct: 65 GDPDIDWEETVYLNLILHQFEYTLTCAVCTKPHEKELRILRRISQQVYATPSRRRMDSKG 124
Query: 192 EVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALK 251
E E++YP + F +D+F E F D V+D EMVCVELVA D+ S K V+FLGSIR+++LK
Sbjct: 125 ETTEISYPNIFFVIDDFEETFKDFTVKDNEMVCVELVARDKTESFKGVVFLGSIRFESLK 184
Query: 252 RVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
+VY+ R S++ K Q+MS G + S +EF+KMKGP GKG AEMA+++
Sbjct: 185 KVYENRASMATKVAQKMSMGWWKGQST--VEFIKMKGPSGKGHAEMAISR 232
>gi|324513200|gb|ADY45433.1| Unknown [Ascaris suum]
Length = 440
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 229/371 (61%), Gaps = 37/371 (9%)
Query: 67 FLTQGTSYWTDLFVRYFLFQTDSNIDC---------DDLLFFVRKKYIKTSSRNLPKF-- 115
F++ W+ +F + + N+ C DD+L++V + + +S+N P
Sbjct: 47 FVSNQERRWSKVFSDFIV----GNVHCTSDKCSAHSDDMLWYVPMQ--QRASQNSPYSGL 100
Query: 116 -ETEVEVFRKDSRKLPIG-DPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKR 173
+++V+R+ S K P D ++WEETV LN+I+ Q D+ +T A+CT+TSP++LQ+L++
Sbjct: 101 GNGQLQVYRRQSPKQPAAFDSGINWEETVCLNLILQQLDFHVTCAVCTKTSPQNLQILRK 160
Query: 174 HSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRA 233
+ Q+VY SPSRRRMD+KG+ EE+T+P + F +D+F ++F D++VRDGE VCVELVA DR
Sbjct: 161 NCQRVYPSPSRRRMDSKGDCEEITFPKIYFAIDDFEQIFSDVIVRDGECVCVELVARDRY 220
Query: 234 GSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKG 293
+ ++VIFLGSIRY+ LK+VYD R S + + QR+ ++S R EFV+M+GP GKG
Sbjct: 221 KNREAVIFLGSIRYEVLKQVYDTRASTTWHWAQRL-----ISSSQRRQEFVRMRGPHGKG 275
Query: 294 FAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDFYYYRHQRRLSDPS-ANINMF 352
+AEMAV + G ETP S D D D + ++RRLSD + ++ ++
Sbjct: 276 YAEMAVARVANCGFETPMS----------DQPMDFDGSNSLDQYNRRRLSDTNLSHRPVY 325
Query: 353 AKS-IWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRDELDDGAYNPLWTMRGFTQT 411
+S + GP T++A D++ + E+EA + DELD+ + LW++RGF Q
Sbjct: 326 NRSAMTPGPSGCQTSRARRWQSEADTV-NQYPEVEANTIDDELDENVLSRLWSVRGFGQA 384
Query: 412 FHFWKESKRAQ 422
+H+ +E +RA+
Sbjct: 385 WHWLREKRRAE 395
>gi|72010481|ref|XP_786746.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 2
[Strongylocentrotus purpuratus]
gi|390344020|ref|XP_003726025.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 1
[Strongylocentrotus purpuratus]
Length = 410
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 228/373 (61%), Gaps = 29/373 (7%)
Query: 41 TTLEQLLEEINFQRAKEK--RQYLRNDMF---LTQGTSYWTDLFVRYFLFQTDSNIDCDD 95
++ +++ EI +R ++K R D F + +W LF ++F+ + + DD
Sbjct: 14 SSFRKMINEILDERGRDKLCRSLPSQDGFGRIPMEVNCFWARLFSQHFVAEVPEELR-DD 72
Query: 96 LLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFDYT 154
+LFF+ +K + +SR + + +EVFR+DS+ LP +G+P++DWEETVYLN+I+ Q++Y
Sbjct: 73 MLFFIHRK--QPTSRQ-DRQQARLEVFRQDSKNLPSLGEPNIDWEETVYLNLILQQYNYI 129
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
LT A+C + S L +L++H+++V+ASPSRRRMD+KGE E++YP + F +DNF+E+F D
Sbjct: 130 LTCAVCIK-SEGTLTILRKHTEQVFASPSRRRMDSKGEESEVSYPNIFFIIDNFDEIFGD 188
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFS 274
V++G+M CVELVAS++ G +SV+FLGS+R++ALK+VYD R SVS+K ++S G F
Sbjct: 189 FTVQEGQMFCVELVASEKQGPFRSVVFLGSVRHEALKKVYDNRASVSSKVASKVSMGFF- 247
Query: 275 NNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDFY 334
R+EF++M+GP+GKGFAE+AV++ ++E + ++ +DS D
Sbjct: 248 QGGRGRVEFIRMRGPEGKGFAEVAVSRASWSSSVESSTEDVHSASESFDSTTD------- 300
Query: 335 YYRHQRRLSDPSANINMFAKSIWKG-PVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRDE 393
PS + + + G P++K K+ S+ E L +L +G E A DE
Sbjct: 301 ---------GPSTSTGSLPRDVIIGSPIHKGLRKSQSDSETLSTLTNGKDEEAACQSEDE 351
Query: 394 LDDGAYNPLWTMR 406
+++ W R
Sbjct: 352 GPPSSWSRRWMRR 364
>gi|348522648|ref|XP_003448836.1| PREDICTED: uncharacterized protein KIAA0930-like [Oreochromis
niloticus]
Length = 422
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 189/282 (67%), Gaps = 15/282 (5%)
Query: 42 TLEQLLEEINFQRAK-EKRQYLRN-DMFLTQGTSYWTDLFVRYFLFQTDSNIDCDDLLFF 99
+L+Q+L+ I +R++ RQ + F +WT +F YF+ + D D+LF+
Sbjct: 24 SLQQMLKAIADERSRLNSRQEISGIGCFKDDRIVFWTWMFSTYFMEKWAPRQD--DMLFY 81
Query: 100 VRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLA 158
VR+K S+ N + EVEV+R+DS+KLP +GDPD+DWEE+VYLN+I+ + DY +T A
Sbjct: 82 VRRKLSYVSADNSEGKKVEVEVYRRDSKKLPGLGDPDIDWEESVYLNLILQKLDYVVTCA 141
Query: 159 ICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVR 218
+CTR+ + + K+ Q+V+ASPS+ MD+KGE +M+YP + F +DNF EVF D+ V
Sbjct: 142 VCTRSDAGDIHIHKKKCQEVFASPSKHAMDSKGEESKMSYPNIFFMIDNFEEVFSDMTVG 201
Query: 219 DGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSN 278
+GEMVCVELVASD++ + + VIF GSIRY+ALK+VYD R SV+ K QRMSFG + N+
Sbjct: 202 EGEMVCVELVASDKSNTFQGVIFQGSIRYEALKKVYDNRVSVAAKMAQRMSFGFYKYNN- 260
Query: 279 SRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETD 320
+EFV+MKGPQGKG AEMAV++ PT C T+
Sbjct: 261 --MEFVRMKGPQGKGHAEMAVSR-------VPTGNTSPCGTE 293
>gi|291241833|ref|XP_002740815.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 422
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/240 (49%), Positives = 178/240 (74%), Gaps = 7/240 (2%)
Query: 65 DMFLTQGTSYWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRK 124
+ + + TS+WT LF +F+ D DD+LF+VRK+ + + + +++VFR+
Sbjct: 34 EFVVIESTSFWTQLFKHHFVESIDEL--RDDMLFYVRKRE-EIDRDQVQNEKVKLDVFRR 90
Query: 125 DSRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPS 183
D++ LP +GDPD+DWE++VYLN+I+ QF+YTLT AIC R K + V+K+HSQ VYASPS
Sbjct: 91 DAKILPSLGDPDIDWEQSVYLNLILQQFEYTLTCAIC-RKPGKDIHVIKKHSQSVYASPS 149
Query: 184 RRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLG 243
+R+MD+KGEV E+ YP + F +DNF+E F D+++ +G+MVCVELVA ++ G+ + VIFLG
Sbjct: 150 KRQMDSKGEVAEVAYPNIYFIIDNFDEAFGDMMIEEGQMVCVELVAQEKLGTFQGVIFLG 209
Query: 244 SIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPK 303
S+RY+AL+RVY+ R S++++ QRMS G ++ R+EF++MKGP+GKG AEMAV++ K
Sbjct: 210 SVRYEALRRVYEGRASMASRIAQRMSLGKYTG--RGRMEFIRMKGPEGKGHAEMAVSRYK 267
>gi|268579979|ref|XP_002644972.1| Hypothetical protein CBG10937 [Caenorhabditis briggsae]
Length = 454
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 216/362 (59%), Gaps = 38/362 (10%)
Query: 75 WTDLFVRY-----FLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKL 129
W LF+ + + T + DD++++V + + T+S + ++ ++VFR++ +
Sbjct: 73 WAKLFMEFIIGNAYCQSTKCHAHSDDMIWYVNQAKL-TNSFYIQGNQSLLQVFRRNGKNQ 131
Query: 130 PI-GDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMD 188
P D + +WEETV LN+I+ Q D+ +T A+CT+T P++LQ+++++ Q+V+ SPSRRRMD
Sbjct: 132 PAPADDNYNWEETVCLNIIMQQIDFYVTCAVCTKTGPQNLQIIRKNCQRVFPSPSRRRMD 191
Query: 189 TKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYD 248
+KGE EE+TYP + F +D F E+F+D++VRDGE VCVELVA DR + +SV+FLGSIRY+
Sbjct: 192 SKGENEEITYPKLYFAIDGFEEIFNDVIVRDGECVCVELVARDRQKTRESVVFLGSIRYE 251
Query: 249 ALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVE 308
LK+VYD + S + ++ Q++ + R EFV+M+GPQGKG+AEMAVT+ G E
Sbjct: 252 ILKQVYDTKASSTWQWAQKLM-----KAGDRRQEFVRMRGPQGKGYAEMAVTRVPNCGYE 306
Query: 309 TPTSEPGYCETDMWDSDWDDDPEDFYYYRH------QRRLSDP--SANINMFAKSIWKGP 360
TP +E +P DF +RR+S+ + MF P
Sbjct: 307 TPLTE---------------NPIDFSELAGVEQSLGKRRMSETNLAGGTRMFPSRSIATP 351
Query: 361 VNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKR 420
+ + + + + E+E ++ DELD+G N LW+MRGF Q +H +E KR
Sbjct: 352 SHSSRGRRWQSEA---DTVNQYPEVEGSNIDDELDEGPTNKLWSMRGFAQVWHGLREKKR 408
Query: 421 AQ 422
A+
Sbjct: 409 AE 410
>gi|410926637|ref|XP_003976784.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Takifugu
rubripes]
Length = 424
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 190/289 (65%), Gaps = 25/289 (8%)
Query: 42 TLEQLLEEINFQRAKEKRQYLRNDM-----FLTQGTSYWTDLFVRYFLFQTDSNIDCDDL 96
+L+Q+L+ I +R R LR ++ F +WT +F YF+ + DD+
Sbjct: 23 SLQQMLKAIADERT---RLNLRQELSGLGCFKDDRIVFWTWMFSTYFMEKLAP--PQDDM 77
Query: 97 LFFVRKK--YIKTSSRNLPKF--ETEVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQF 151
LF+VR+K Y+ + K + EVEV+R+DS+KLP +GDPD+DWEE+VYLN+I+ +
Sbjct: 78 LFYVRRKPAYVGADNSEGKKVGCKVEVEVYRRDSKKLPGLGDPDIDWEESVYLNLILQKL 137
Query: 152 DYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEV 211
DY +T A+CTRT + + K+ Q+V+ASPS+ MD+KGE +M+YP + F +DNF EV
Sbjct: 138 DYVVTCAVCTRTDAGDIHIHKKKCQEVFASPSKHAMDSKGEESKMSYPNIFFMIDNFEEV 197
Query: 212 FHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFG 271
F D+ V +GEMVCVELVASD+ + + VIF GSIRY+ALK+VYD R SV+ K QRMSFG
Sbjct: 198 FSDMTVGEGEMVCVELVASDKGNTFQGVIFQGSIRYEALKKVYDNRVSVAAKMAQRMSFG 257
Query: 272 IFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETD 320
+ N+ +EFV+MKGPQGKG AEMAV++ PT + C T+
Sbjct: 258 FYKYNN---MEFVRMKGPQGKGHAEMAVSR-------VPTGDTSPCGTE 296
>gi|308511499|ref|XP_003117932.1| hypothetical protein CRE_00575 [Caenorhabditis remanei]
gi|308238578|gb|EFO82530.1| hypothetical protein CRE_00575 [Caenorhabditis remanei]
Length = 463
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 214/356 (60%), Gaps = 18/356 (5%)
Query: 75 WTDLFVRY-----FLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKL 129
W LF+ + + T DD++++V + + T+S + + ++VFR+ S+
Sbjct: 74 WAKLFMEFIIGNAYCQSTKCQAQSDDMIWYVHQAKL-TNSFYIQGNQNLLQVFRRHSKNQ 132
Query: 130 PI-GDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMD 188
P D + +WEETV LN+I+ Q D+ +T A+CT+T P++LQ+++++ Q+V+ SPSRRRMD
Sbjct: 133 PTPCDDNYNWEETVCLNIIMQQIDFYVTCAVCTKTGPQNLQIIRKNCQRVFPSPSRRRMD 192
Query: 189 TKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYD 248
+KGE EE+TYP + F +D F E+F+D++VRDGE VCVELVA DR + +SV+FLGSIRY+
Sbjct: 193 SKGENEEITYPKLYFAIDGFEEIFNDVIVRDGECVCVELVARDRQKTRESVVFLGSIRYE 252
Query: 249 ALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVE 308
LK+VYD + S + ++ Q++ + R EFV+M+GPQGKG+AEMAV + G E
Sbjct: 253 ILKQVYDTKASSTWQWAQKLMKA-----GDRRQEFVRMRGPQGKGYAEMAVARVPNCGYE 307
Query: 309 TPTSEPGYCETDMWDSDWDDDPEDFYYYRHQRRLSDP--SANINMFAKSIWKGPVNKTTA 366
TP +E +++ + E +RR+S+ + MF P + +
Sbjct: 308 TPLTENPIDFSELAGVS-EKKRESVEQSLGKRRMSETNLAGGTRMFPSRSIATPSHSSRG 366
Query: 367 KAVSEDEGLDSLAHGVAEIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
+ + + E+E ++ DELD+G N LW+MRGF Q +H +E KRA+
Sbjct: 367 RRWQSEA---DTVNQYPEVEGSNIDDELDEGPTNKLWSMRGFAQVWHGLREKKRAE 419
>gi|17550490|ref|NP_509174.1| Protein C16E9.2, isoform a [Caenorhabditis elegans]
gi|351058153|emb|CCD64767.1| Protein C16E9.2, isoform a [Caenorhabditis elegans]
Length = 457
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 217/364 (59%), Gaps = 42/364 (11%)
Query: 75 WTDLFVRY-----FLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKL 129
W LF+ + + T DD++++V + + ++S + ++ ++VFR+ S+
Sbjct: 76 WAKLFMEFIIGTAYCQSTKCQAHSDDMIWYVHQAKL-SNSFYIQGNQSLLQVFRRHSKNQ 134
Query: 130 PI-GDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMD 188
P D +WEETV LN+I+ Q D+ +T A+CT+T P++LQ+++++ Q+V+ SPSRRRMD
Sbjct: 135 PTPCDDSYNWEETVCLNIIMQQIDFYVTCAVCTKTGPQNLQIIRKNCQRVFPSPSRRRMD 194
Query: 189 TKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYD 248
+KGE EE+TYP + F +D F EVF+D++VRDGE VCVELVA DR + +SV+FLGSIRY+
Sbjct: 195 SKGENEEITYPKLYFAIDGFEEVFNDVIVRDGECVCVELVARDRQKTRESVVFLGSIRYE 254
Query: 249 ALKRVYDARTSVSNKFTQR-MSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGV 307
LK+VYD + S + ++ Q+ M G + R EFV+M+GPQGKG+AEMAV + G
Sbjct: 255 ILKQVYDTKASSTWQWAQKLMKVG------DRRQEFVRMRGPQGKGYAEMAVARVPNCGY 308
Query: 308 ETPTSEPGYCETDMWDSDWDDDPEDFYYYRH------QRRLSDP--SANINMFAKSIWKG 359
ETP +E +P DF +RR+S+ + MF
Sbjct: 309 ETPLTE---------------NPIDFSELAGVEQSLGKRRMSETNLAGGTRMFPSRSIAT 353
Query: 360 PVNKTTAKA-VSEDEGLDSLAHGVAEIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKES 418
P + + + SE + ++ E+E ++ DELD+G N LW+MRGF Q +H +E
Sbjct: 354 PSHSSRGRRWQSEADTVNQYP----EVEGSNIDDELDEGPTNKLWSMRGFAQVWHGLREK 409
Query: 419 KRAQ 422
KRA+
Sbjct: 410 KRAE 413
>gi|393905150|gb|EJD73881.1| hypothetical protein LOAG_18727 [Loa loa]
Length = 433
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 238/403 (59%), Gaps = 37/403 (9%)
Query: 34 ESILKSTTT-----LEQLLEEINFQRAKEKRQYLRNDMFLTQGTSYWTDLFVRYFLFQTD 88
ES LK++T+ ++LL+ I+ R + + + ++ ++ W LF + T
Sbjct: 9 ESALKTSTSNYCTSFDELLKRISNLR-QNQLTFDKDFEVISNHERKWCKLFADFIAGSTY 67
Query: 89 SNI-DC----DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPI-GDPDVDWEETV 142
N +C DD+L++V + + + + + +++V+R+ S P+ DP ++WEETV
Sbjct: 68 CNAKNCAAHSDDMLWYVSMQQLNRDF-CIGQEDGQLQVYRRQSPNKPVLNDPLINWEETV 126
Query: 143 YLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVC 202
LN+I+ Q D+ +T A+C +TSP++LQ+L+++ Q+VY SPS+RRMD+KGE EE+TYP +
Sbjct: 127 CLNLILQQLDFQVTCAVCIKTSPQNLQILRKNCQRVYPSPSKRRMDSKGECEEITYPKIY 186
Query: 203 FTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSN 262
F +D+F ++F D++VRDGE VCVELVA DR + ++VIFLGSIRY+ LK+ YD+R S S
Sbjct: 187 FAIDDFEQIFSDVVVRDGECVCVELVARDRRKNCEAVIFLGSIRYEVLKQAYDSRASFSW 246
Query: 263 KFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMW 322
++ Q++ I N R EFV+M+GP GKG+AEMAV + G ETP SE D+
Sbjct: 247 QWAQKL---ITPN--QRRREFVRMRGPHGKGYAEMAVMRLANCGYETPVSEQSLNFEDLG 301
Query: 323 DSDWDDDPEDFYYYRHQRRLSDPSANINMFAKSIWKGP---VNKTTAKAVSEDEGLDSLA 379
RR+SD N++ + K + P ++ D+L
Sbjct: 302 QCG-------------MRRMSD--TNLSHYPKRLTMTPGLSEGYDASRGRRWQSETDTL- 345
Query: 380 HGVAEIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
+ E+EA + D L++G + LW++RGF Q +H+ +E +RA+
Sbjct: 346 NQYREVEANSIDDVLNEGMMSRLWSVRGFGQAWHWLREKRRAE 388
>gi|432964881|ref|XP_004087016.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Oryzias
latipes]
Length = 412
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 175/255 (68%), Gaps = 20/255 (7%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRN-------LPKFETEVEVFRKDS 126
+WT +F YF+ + D D+LF+VR+K S+ N F+ EVEV+R+DS
Sbjct: 42 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKPAYMSADNGEGRKVRSAVFQVEVEVYRRDS 99
Query: 127 RKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRR 185
+KLP +GDPD+DWEE+VYLN+I+ + DY +T A+CTR+ + + ++ Q+V+ASPS+
Sbjct: 100 KKLPGLGDPDIDWEESVYLNLILQKLDYVVTCAVCTRSDAGDIHIHRKKCQEVFASPSKH 159
Query: 186 RMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSI 245
MD+KGE +M+YP + F +DNF EVF D+ V +GEMVCVELVASD++ + + VIF GSI
Sbjct: 160 AMDSKGEESKMSYPNIFFMIDNFEEVFRDMTVGEGEMVCVELVASDKSNTFQGVIFQGSI 219
Query: 246 RYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGY 305
RY+ALK+VYD R SV+ K QRMSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 220 RYEALKKVYDNRVSVAAKMAQRMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR---- 272
Query: 306 GVETPTSEPGYCETD 320
PT + C T+
Sbjct: 273 ---VPTGDTSPCGTE 284
>gi|363728205|ref|XP_416465.3| PREDICTED: uncharacterized protein KIAA0930-like [Gallus gallus]
Length = 441
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 176/243 (72%), Gaps = 14/243 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKK--YIKTSSRNLPKFETEVEVFRKDSRKLP- 130
+WT +F YF+ + DD+LF+VR+K Y+ S + K + EVEV+R+DS+KLP
Sbjct: 74 FWTWMFSTYFMEKWAPR--QDDMLFYVRRKLSYVSGDSTDGKK-QVEVEVYRRDSKKLPG 130
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTK 190
+GDPD+DWEE+VYLN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+K
Sbjct: 131 LGDPDIDWEESVYLNLILQKLDYVVTCAVCTRSDGGDIHIHKKKSQQVFASPSKHPMDSK 190
Query: 191 GEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDAL 250
GE +++YP + F +D+F EVF D+ V +GEMVCVELVASD++ + + VIF GSIRY+AL
Sbjct: 191 GEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKSNTFQGVIFQGSIRYEAL 250
Query: 251 KRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK-PKG----Y 305
K+VYD R SV+ K QRMSFG + N+ +EFV+MKGPQGKG AEMAV++ P G Y
Sbjct: 251 KKVYDNRVSVAAKMAQRMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSRVPTGDTSPY 307
Query: 306 GVE 308
G E
Sbjct: 308 GTE 310
>gi|327273377|ref|XP_003221457.1| PREDICTED: uncharacterized protein C22orf9-like [Anolis
carolinensis]
Length = 429
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/267 (47%), Positives = 185/267 (69%), Gaps = 15/267 (5%)
Query: 42 TLEQLLEEINFQRAKEKRQYLRNDM-----FLTQGTSYWTDLFVRYFLFQTDSNIDCDDL 96
+L+Q+L I +R+ R +R+++ F +WT +F YF+ + S DD+
Sbjct: 28 SLQQMLRAIAEERS---RLSIRHEISGLGCFKDDRIVFWTWMFSTYFMEKLASR--QDDM 82
Query: 97 LFFVRKKYIKTSSRNL-PKFETEVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFDYT 154
LF+VR+K N K + EVEV+R+DS+KLP +GDPD+DWEE+V LN+I+ + DY
Sbjct: 83 LFYVRRKLSYVGEDNGDGKKQVEVEVYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYI 142
Query: 155 LTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHD 214
+T A+CTR+ + + ++ SQ+V+ASPS+ MD+KGE +++YP + F +DNF EVF D
Sbjct: 143 VTCAVCTRSDGGDIHIHRKKSQQVFASPSKHPMDSKGEESKISYPNIFFMIDNFEEVFSD 202
Query: 215 ILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFS 274
+ V +GEMVCVELVASD++ + + VIF GSIRY+ALK+VYD R SV+ K QRMSFG +
Sbjct: 203 MTVGEGEMVCVELVASDKSNTFQGVIFQGSIRYEALKKVYDNRVSVAAKMAQRMSFGFYK 262
Query: 275 NNSNSRIEFVKMKGPQGKGFAEMAVTK 301
N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 263 YNN---MEFVRMKGPQGKGHAEMAVSR 286
>gi|326912478|ref|XP_003202577.1| PREDICTED: uncharacterized protein C22orf9-like [Meleagris
gallopavo]
Length = 418
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 176/243 (72%), Gaps = 14/243 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKK--YIKTSSRNLPKFETEVEVFRKDSRKLP- 130
+WT +F YF+ + DD+LF+VR+K Y+ S + K + EVEV+R+DS+KLP
Sbjct: 51 FWTWMFSTYFMEKWAPR--QDDMLFYVRRKLSYVSGDSTDGKK-QVEVEVYRRDSKKLPG 107
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTK 190
+GDPD+DWEE+VYLN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+K
Sbjct: 108 LGDPDIDWEESVYLNLILQKLDYVVTCAVCTRSDGGDIHIHKKKSQQVFASPSKHPMDSK 167
Query: 191 GEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDAL 250
GE +++YP + F +D+F EVF D+ V +GEMVCVELVASD++ + + VIF GSIRY+AL
Sbjct: 168 GEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKSNTFQGVIFQGSIRYEAL 227
Query: 251 KRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK-PKG----Y 305
K+VYD R SV+ K QRMSFG + N+ +EFV+MKGPQGKG AEMAV++ P G Y
Sbjct: 228 KKVYDNRVSVAAKMAQRMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSRVPTGDTSPY 284
Query: 306 GVE 308
G E
Sbjct: 285 GTE 287
>gi|339240677|ref|XP_003376264.1| conserved hypothetical protein [Trichinella spiralis]
gi|316975032|gb|EFV58491.1| conserved hypothetical protein [Trichinella spiralis]
Length = 457
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 231/409 (56%), Gaps = 47/409 (11%)
Query: 38 KSTTTLEQLLEEINFQRAKEKRQYLRNDMFLTQGTSY-WTDLFVRYFLF-----QTDSNI 91
+S + LL++I+ R K+ L + + ++ + W +F +FL ++ +
Sbjct: 9 ESCLCVSLLLQKISNLRKKQSFTELDSYVMVSNVDKHAWARIFAEFFLVNAHCTKSHCSF 68
Query: 92 DCDDLLFFV-RKKYIKTSSRNLPKFETEVEVFRKDSRKLPI-GDPDVDWEETVYLNMIIH 149
DD+L++V +I S L ++V+RK S+K P G ++WEET+YLN+++H
Sbjct: 69 QTDDILWYVPHSSFIYNSF--LTSQSGFIKVYRKTSKKQPSPGSQSINWEETLYLNLLLH 126
Query: 150 Q------FDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCF 203
+ +Y LT A+CTRTSP++LQ+LK++SQ+VYASPSR RMD+KGE EE TYP +CF
Sbjct: 127 ENTVFFEVEYVLTCAVCTRTSPQNLQILKKYSQRVYASPSRHRMDSKGESEEFTYPNICF 186
Query: 204 TVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNK 263
VDNF +VF +I++RDGE VCVELVA D +G S IFLGSIRY+ LK+VYD++
Sbjct: 187 PVDNFEQVFKEIVIRDGECVCVELVAKDLSGQYVSTIFLGSIRYEVLKQVYDSKICS--- 243
Query: 264 FTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG-YCETDMW 322
T + + + + R+EFV M+GP+GKGFAEMAV + G +TP S G Y E D+
Sbjct: 244 -TWNWANNLIRSTGHKRLEFVIMRGPRGKGFAEMAVARVPVQGYQTPVSSIGSYDEKDLL 302
Query: 323 DSDWDDDPEDFYYYRHQRRLSDPS-ANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHG 381
+ +QRR SD + + + S ++ K+T V + +
Sbjct: 303 SA----------VKAYQRRRSDTNLSRWSCVTSSFYEN--YKSTCHPVKKCPSETDTSRQ 350
Query: 382 VAEIEAGDMRDELDDG---------AYNPLWTMRGFTQTFHFWKESKRA 421
E+EA +DDG A LW+ RGF+Q +H +E +RA
Sbjct: 351 WPEVEAST----IDDGSNKIGNESLALGQLWSTRGFSQAWHRLREKRRA 395
>gi|449273316|gb|EMC82839.1| Putative protein C22orf9 like protein, partial [Columba livia]
Length = 369
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 170/231 (73%), Gaps = 9/231 (3%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKK--YIKTSSRNLPKFETEVEVFRKDSRKLP- 130
+WT +F YF+ + DD+LF+VR+K Y+ S K + EVEV+R+DS+KLP
Sbjct: 12 FWTWMFSTYFMEKWAPR--QDDMLFYVRRKLSYVSGDSTEGKK-QVEVEVYRRDSKKLPG 68
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTK 190
+GDPD+DWEE+VYLN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+K
Sbjct: 69 LGDPDIDWEESVYLNLILQKLDYVVTCAVCTRSDGGDIHIHKKKSQQVFASPSKHPMDSK 128
Query: 191 GEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDAL 250
GE +++YP + F +D+F EVF D+ V +GEMVCVELVASD++ + + VIF GSIRY+AL
Sbjct: 129 GEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKSNTFQGVIFQGSIRYEAL 188
Query: 251 KRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
K+VYD R SV+ K QRMSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 189 KKVYDNRVSVAAKMAQRMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 236
>gi|348551097|ref|XP_003461367.1| PREDICTED: uncharacterized protein KIAA0930-like [Cavia porcellus]
Length = 456
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 168/237 (70%), Gaps = 14/237 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEV--EVFRKD 125
+WT +F YF+ + D D+LF+VR+K T S R LP E EV EV+R+D
Sbjct: 81 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYTGSEGSADARKLPDAEPEVDVEVYRRD 138
Query: 126 SRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSR 184
S+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 139 SKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSK 198
Query: 185 RRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGS 244
MD+KGE +M+YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GS
Sbjct: 199 HPMDSKGEESKMSYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGS 258
Query: 245 IRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
IRY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 259 IRYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 312
>gi|166157929|ref|NP_001107374.1| uncharacterized protein LOC100135200 [Xenopus (Silurana)
tropicalis]
gi|163916295|gb|AAI57244.1| LOC100135200 protein [Xenopus (Silurana) tropicalis]
gi|213624521|gb|AAI71214.1| hypothetical protein LOC100135200 [Xenopus (Silurana) tropicalis]
gi|213625733|gb|AAI71216.1| hypothetical protein LOC100135200 [Xenopus (Silurana) tropicalis]
Length = 425
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 174/250 (69%), Gaps = 15/250 (6%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKK--YIKTSSRNLPKFETEVEVFRKDSRKLP- 130
+WT ++ YF+ + DD+LF+VR+K Y+ T K + EVEV+RKDS+KLP
Sbjct: 57 FWTWMYSTYFMEKWAPR--QDDMLFYVRRKPAYMGTDGTEGRK-QVEVEVYRKDSKKLPG 113
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTK 190
+GDPD+DWEE+VYLN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+K
Sbjct: 114 LGDPDIDWEESVYLNLILQKLDYMVTCAVCTRSDAGDIHIHKKKSQQVFASPSKHPMDSK 173
Query: 191 GEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDAL 250
GE +++YP + F +DNF EVF D+ V +GEMVCVELVA D+ + + VIF GSIRY+AL
Sbjct: 174 GEESKISYPNIFFMIDNFEEVFSDMTVGEGEMVCVELVARDKTNTFQGVIFQGSIRYEAL 233
Query: 251 KRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK-----PKGY 305
K+VYD R SV+ K Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++ Y
Sbjct: 234 KKVYDNRVSVAAKMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSRVSTGDTSPY 290
Query: 306 GVETPTSEPG 315
G E S PG
Sbjct: 291 GTEE-DSNPG 299
>gi|148236388|ref|NP_001079690.1| uncharacterized protein KIAA0930 homolog [Xenopus laevis]
gi|28703807|gb|AAH47259.1| MGC53303 protein [Xenopus laevis]
Length = 425
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 174/250 (69%), Gaps = 15/250 (6%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKK--YIKTSSRNLPKFETEVEVFRKDSRKLP- 130
+WT ++ YF+ + DD+LF+VR+K Y+ N + + EVEV+RKDS+KLP
Sbjct: 57 FWTWMYSTYFMEKWAPR--QDDMLFYVRRKPAYMGPDG-NEGRKQVEVEVYRKDSKKLPG 113
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTK 190
+GDPD+DWEE+VYLN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+K
Sbjct: 114 LGDPDIDWEESVYLNLILQKLDYMVTCAVCTRSDAGDIHIHKKKSQQVFASPSKHPMDSK 173
Query: 191 GEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDAL 250
GE +++YP + F +DNF EVF D+ V +GEMVCVELVA D+ + + VIF GSIRY+AL
Sbjct: 174 GEESKISYPNIFFMIDNFEEVFSDMTVGEGEMVCVELVARDKTNTFQGVIFQGSIRYEAL 233
Query: 251 KRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK-----PKGY 305
K+VYD R SV+ K Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++ Y
Sbjct: 234 KKVYDNRVSVAAKMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSRVSTGDTSPY 290
Query: 306 GVETPTSEPG 315
G E S PG
Sbjct: 291 GTEE-DSNPG 299
>gi|126258174|sp|Q801S4.2|K0930_XENLA RecName: Full=Uncharacterized protein KIAA0930 homolog
Length = 399
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 174/250 (69%), Gaps = 15/250 (6%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKK--YIKTSSRNLPKFETEVEVFRKDSRKLP- 130
+WT ++ YF+ + DD+LF+VR+K Y+ N + + EVEV+RKDS+KLP
Sbjct: 31 FWTWMYSTYFMEKWAPR--QDDMLFYVRRKPAYMGPDG-NEGRKQVEVEVYRKDSKKLPG 87
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTK 190
+GDPD+DWEE+VYLN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+K
Sbjct: 88 LGDPDIDWEESVYLNLILQKLDYMVTCAVCTRSDAGDIHIHKKKSQQVFASPSKHPMDSK 147
Query: 191 GEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDAL 250
GE +++YP + F +DNF EVF D+ V +GEMVCVELVA D+ + + VIF GSIRY+AL
Sbjct: 148 GEESKISYPNIFFMIDNFEEVFSDMTVGEGEMVCVELVARDKTNTFQGVIFQGSIRYEAL 207
Query: 251 KRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK-----PKGY 305
K+VYD R SV+ K Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++ Y
Sbjct: 208 KKVYDNRVSVAAKMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSRVSTGDTSPY 264
Query: 306 GVETPTSEPG 315
G E S PG
Sbjct: 265 GTEE-DSNPG 273
>gi|449482094|ref|XP_002187924.2| PREDICTED: uncharacterized protein KIAA0930 homolog [Taeniopygia
guttata]
Length = 364
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 161/211 (76%), Gaps = 7/211 (3%)
Query: 94 DDLLFFVRKK--YIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQ 150
DD+LF+VR+K Y+ S K + EVEV+R+DS+KLP +GDPD+DWEE+VYLN+I+ +
Sbjct: 15 DDMLFYVRRKLSYVTGESTEGKK-QVEVEVYRRDSKKLPGLGDPDIDWEESVYLNLILQK 73
Query: 151 FDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNE 210
DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+KGE +++YP + F +D+F E
Sbjct: 74 LDYVVTCAVCTRSDGGDIHIHKKKSQQVFASPSKHPMDSKGEESKISYPNIFFMIDSFEE 133
Query: 211 VFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSF 270
VF D+ V +GEMVCVELVASD++ + + VIF GSIRY+ALK+VYD R SV+ K QRMSF
Sbjct: 134 VFSDMTVGEGEMVCVELVASDKSNTFQGVIFQGSIRYEALKKVYDNRVSVAAKMAQRMSF 193
Query: 271 GIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
G + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 194 GFYKYNN---MEFVRMKGPQGKGHAEMAVSR 221
>gi|170575267|ref|XP_001893168.1| MGC53303 protein [Brugia malayi]
gi|158600965|gb|EDP38000.1| MGC53303 protein, putative [Brugia malayi]
Length = 439
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 228/404 (56%), Gaps = 52/404 (12%)
Query: 41 TTLEQLLEEINFQRAKEKRQYLRNDMFLTQGTSYWTDLFVRYFLFQTDSNI-----DCDD 95
T+ ++LL+ I+ R + + + + ++ W LF + N DD
Sbjct: 21 TSFDELLKRISNLR-QNQLTFDKGYEVISNHERKWCKLFADFIAGNAYCNAKNYASHSDD 79
Query: 96 LLFFVRKKYIKTSSRN--LPKFETEVEVFRKDSRKLPI-GDPDVDWEETVYLNMIIHQFD 152
+L++V I+ SR+ + + + +++V+R++S P+ DP ++WEETV LN+I+ Q D
Sbjct: 80 MLWYVS---IQQISRDFCIGQGDGQLQVYRRESPNKPVLNDPSINWEETVCLNLILQQLD 136
Query: 153 YTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVF 212
+ +T A+C +TSP++LQ+L+++ Q+VY SPS+RRMD+KGE EE+TYP + F +D+F ++F
Sbjct: 137 FQVTCAVCIKTSPQNLQILRKNCQRVYPSPSKRRMDSKGECEEITYPEIYFAIDDFEQIF 196
Query: 213 HDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
DI+VRDGE VCVELVA DR + ++VIFLGSIRY+ LK+ YD R S S ++ Q++ I
Sbjct: 197 SDIVVRDGECVCVELVAKDRCKNCEAVIFLGSIRYEVLKQAYDTRASFSWQWAQKL---I 253
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEP-------GYCET-DMWDS 324
N R EFV+M+GP GKG+AEMAV + G ETP SE G C M D+
Sbjct: 254 TPN--QRRREFVRMRGPHGKGYAEMAVMRLPNCGYETPLSEQSLNFEGLGQCGVRRMSDT 311
Query: 325 DWDDDPEDFYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAE 384
+ P+ M + G V + SE L+ E
Sbjct: 312 NLSHYPQRL-----------------MVTSGLSNGHVASRGRRWQSETNTLNQ----YRE 350
Query: 385 IEAGDMRD------ELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
+EA + D L++G + LW++RGF Q +H+ +E +RA+
Sbjct: 351 VEASSIDDVVFVRLVLNEGMMSRLWSVRGFGQAWHWLRERRRAE 394
>gi|338721437|ref|XP_001488217.3| PREDICTED: uncharacterized protein KIAA0930-like [Equus caballus]
Length = 560
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K S R + E EVEV+R+DS+
Sbjct: 187 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAFAGSESGADGRKAAEPEVEVEVYRRDSK 244
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 245 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 304
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 305 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 364
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 365 YEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 416
>gi|395537704|ref|XP_003770833.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Sarcophilus
harrisii]
Length = 410
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 170/237 (71%), Gaps = 15/237 (6%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKY--------IKTSSRNLPKFETEVEVFRKD 125
+WT +F YF+ + D D+LF+VR+K + S + P+ + +VEV+R+D
Sbjct: 36 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLSFVGREGGLGGSRADSPQ-QVDVEVYRRD 92
Query: 126 SRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSR 184
S+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+
Sbjct: 93 SKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRSDTGDIHIHKKKSQQVFASPSK 152
Query: 185 RRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGS 244
MD+KGE +++YP + F +DNF EVF D+ V +GEMVCVELVASD+A + + VIF GS
Sbjct: 153 HPMDSKGEESKISYPNIFFMIDNFEEVFCDMFVGEGEMVCVELVASDKANTFQGVIFQGS 212
Query: 245 IRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
IRY+ALK+VYD R SV+ K QRMSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 213 IRYEALKKVYDNRVSVAAKMAQRMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 266
>gi|47210771|emb|CAF90664.1| unnamed protein product [Tetraodon nigroviridis]
Length = 415
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 185/304 (60%), Gaps = 36/304 (11%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IG 132
+WT +F YF+ + DD+LF+VR+K + + E+EV+R+DSRKLP +G
Sbjct: 11 FWTWMFSTYFMEKLAP--PQDDMLFYVRRKPAYVPADGSEGRKVELEVYRRDSRKLPGLG 68
Query: 133 DPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGE 192
DPD+DWEE+VYLN+I+ + DY +T A+CTRT + V ++ Q+V+ASPS+ MD+KGE
Sbjct: 69 DPDIDWEESVYLNLILQKLDYVVTCAVCTRTDAGDIHVHRKKCQEVFASPSKHAMDSKGE 128
Query: 193 VEEMTYPCVCFTVDNFNE------------------VFHDILVRDGEMVCVELVASDRAG 234
+M+YP + F +DNF E VF D+ V +GEMVCVELVASD++
Sbjct: 129 ESKMSYPNIFFMIDNFEEVTVAVATGAPTAAGSADAVFGDMTVGEGEMVCVELVASDKSN 188
Query: 235 SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGF 294
+ + V+F GSIRY+AL++VYD R SV+ K QRMSFG + N+ +EFV+MKGPQGKG
Sbjct: 189 TFQGVVFQGSIRYEALRKVYDNRVSVAAKMAQRMSFGFYRYNN---MEFVRMKGPQGKGH 245
Query: 295 AEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDD-----PEDFYYYRHQRRLSDPSANI 349
AEMAV++ PT + C T+ + + D P + +R + PS +
Sbjct: 246 AEMAVSR-------VPTGDTSPCGTEEDPASPEPDRVSGRPRPLRAFGRRRLIGRPSVQV 298
Query: 350 NMFA 353
F+
Sbjct: 299 TSFS 302
>gi|402884542|ref|XP_003905739.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 2
[Papio anubis]
Length = 386
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 168/235 (71%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 13 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKATEPEVEVEVYRRDSK 70
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 71 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 130
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD++ + + VIF GSIR
Sbjct: 131 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKSNTFQGVIFQGSIR 190
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 191 YEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 242
>gi|402884540|ref|XP_003905738.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 1
[Papio anubis]
Length = 404
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 168/235 (71%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKATEPEVEVEVYRRDSK 88
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 89 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 148
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD++ + + VIF GSIR
Sbjct: 149 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKSNTFQGVIFQGSIR 208
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 209 YEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 260
>gi|23468240|gb|AAH38414.1| C22orf9 protein, partial [Homo sapiens]
Length = 475
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 102 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 159
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 160 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 219
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 220 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 279
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 280 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 331
>gi|397482456|ref|XP_003812441.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 1 [Pan
paniscus]
Length = 467
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 94 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 151
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 152 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 211
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 212 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 271
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 272 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 323
>gi|395753540|ref|XP_002831300.2| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 1
[Pongo abelii]
Length = 467
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 167/235 (71%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K +SS R + E EVEV+R+DS+
Sbjct: 94 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSSSESGADGRKAAEPEVEVEVYRRDSK 151
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 152 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 211
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 212 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 271
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R S++ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 272 YEALKKVYDNRVSMAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 323
>gi|57863293|ref|NP_056079.1| uncharacterized protein KIAA0930 isoform a [Homo sapiens]
gi|34530497|dbj|BAC85917.1| unnamed protein product [Homo sapiens]
Length = 409
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 36 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 93
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 94 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 153
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 154 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 213
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 214 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 265
>gi|380811040|gb|AFE77395.1| hypothetical protein LOC23313 isoform b [Macaca mulatta]
gi|380811042|gb|AFE77396.1| hypothetical protein LOC23313 isoform b [Macaca mulatta]
gi|383409559|gb|AFH27993.1| hypothetical protein LOC23313 isoform b [Macaca mulatta]
gi|383409561|gb|AFH27994.1| hypothetical protein LOC23313 isoform b [Macaca mulatta]
gi|384940104|gb|AFI33657.1| hypothetical protein LOC23313 isoform b [Macaca mulatta]
Length = 404
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 167/235 (71%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKATEPEVEVEVYRRDSK 88
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 89 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 148
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 149 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 208
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 209 YEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 260
>gi|410222304|gb|JAA08371.1| KIAA0930 [Pan troglodytes]
gi|410250944|gb|JAA13439.1| KIAA0930 [Pan troglodytes]
gi|410302480|gb|JAA29840.1| KIAA0930 [Pan troglodytes]
gi|410350241|gb|JAA41724.1| KIAA0930 [Pan troglodytes]
Length = 409
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 36 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 93
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 94 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 153
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 154 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 213
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 214 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 265
>gi|426394813|ref|XP_004063681.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 1
[Gorilla gorilla gorilla]
Length = 467
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 94 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 151
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 152 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 211
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 212 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 271
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 272 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 323
>gi|291414554|ref|XP_002723526.1| PREDICTED: C22orf9 protein-like [Oryctolagus cuniculus]
Length = 387
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 166/236 (70%), Gaps = 13/236 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNL-------PKFETEVEVFRKDS 126
+WT +F YF+ + D D+LF+VR+K S + + E EVEV+R+DS
Sbjct: 13 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYAGSESSLDGRKVSAQPEVEVEVYRRDS 70
Query: 127 RKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRR 185
+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + V K+ SQ+V+ASPS+
Sbjct: 71 KKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHVHKKKSQQVFASPSKH 130
Query: 186 RMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSI 245
MD+KGE +M+YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSI
Sbjct: 131 PMDSKGEESKMSYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSI 190
Query: 246 RYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
RY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 191 RYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 243
>gi|119593780|gb|EAW73374.1| chromosome 22 open reading frame 9, isoform CRA_a [Homo sapiens]
gi|168273124|dbj|BAG10401.1| C22orf9 protein [synthetic construct]
Length = 413
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + DD+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 40 FWTWMFSTYFMEKWAPR--QDDMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 97
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 98 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 157
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 158 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 217
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 218 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 269
>gi|297709139|ref|XP_002831301.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 2
[Pongo abelii]
Length = 386
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 167/235 (71%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K +SS R + E EVEV+R+DS+
Sbjct: 13 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSSSESGADGRKAAEPEVEVEVYRRDSK 70
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 71 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 130
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 131 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 190
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R S++ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 191 YEALKKVYDNRVSMAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 242
>gi|426394815|ref|XP_004063682.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 2
[Gorilla gorilla gorilla]
gi|164691183|dbj|BAF98774.1| unnamed protein product [Homo sapiens]
gi|221041618|dbj|BAH12486.1| unnamed protein product [Homo sapiens]
Length = 386
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + DD+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 13 FWTWMFSTYFMEKWAPR--QDDMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 70
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 71 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 130
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 131 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 190
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 191 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 242
>gi|57863295|ref|NP_001009880.1| uncharacterized protein KIAA0930 isoform b [Homo sapiens]
gi|74748760|sp|Q6ICG6.1|K0930_HUMAN RecName: Full=Uncharacterized protein KIAA0930
gi|47678335|emb|CAG30288.1| bK268H5.1 [Homo sapiens]
gi|109451060|emb|CAK54391.1| C22orf9 [synthetic construct]
gi|109451638|emb|CAK54690.1| C22orf9 [synthetic construct]
gi|119593782|gb|EAW73376.1| chromosome 22 open reading frame 9, isoform CRA_c [Homo sapiens]
gi|193787757|dbj|BAG52960.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 88
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 89 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 148
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 149 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 208
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 209 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 260
>gi|297475484|ref|XP_002688024.1| PREDICTED: uncharacterized protein KIAA0930 [Bos taurus]
gi|296486906|tpg|DAA29019.1| TPA: hypothetical protein BOS_6223 [Bos taurus]
Length = 603
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 190/304 (62%), Gaps = 29/304 (9%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K S R + E EVEV+R+DS+
Sbjct: 230 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAFAGSEGALDGRKAAEPEVEVEVYRRDSK 287
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + ++ SQ+V+ASPS+
Sbjct: 288 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHRKRSQQVFASPSKHP 347
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 348 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 407
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYG 306
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 408 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR----- 459
Query: 307 VETPTSEPGYCETDMWDSDWDDDPEDFYYYRHQRRLSDPSANIN----MFAKSI-WKGPV 361
V T + P C T+ D P + R + P+ N F+ S+ KGP
Sbjct: 460 VSTGDTSP--CGTEE-----DSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKGPR 512
Query: 362 NKTT 365
N+ T
Sbjct: 513 NRIT 516
>gi|397482458|ref|XP_003812442.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 2 [Pan
paniscus]
gi|410222302|gb|JAA08370.1| KIAA0930 [Pan troglodytes]
gi|410250942|gb|JAA13438.1| KIAA0930 [Pan troglodytes]
gi|410302478|gb|JAA29839.1| KIAA0930 [Pan troglodytes]
gi|410302482|gb|JAA29841.1| KIAA0930 [Pan troglodytes]
gi|410350243|gb|JAA41725.1| KIAA0930 [Pan troglodytes]
Length = 404
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 88
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 89 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 148
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 149 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 208
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 209 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 260
>gi|301775077|ref|XP_002922960.1| PREDICTED: uncharacterized protein C22orf9-like [Ailuropoda
melanoleuca]
Length = 477
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 165/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYI------KTSSRNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K R + E EVEV+R+DS+
Sbjct: 104 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYPGGEGSVDGRKAAEPEVEVEVYRRDSK 161
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTRT + + K+ SQ+V+ASPS+
Sbjct: 162 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRTDGGDIHIHKKKSQQVFASPSKHP 221
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GSIR
Sbjct: 222 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNLFQGVIFQGSIR 281
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 282 YEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 333
>gi|410965820|ref|XP_003989438.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Felis catus]
Length = 470
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 167/237 (70%), Gaps = 14/237 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEV--EVFRKD 125
+WT +F YF+ + D D+LF+VR+K S R L + E EV EV+R+D
Sbjct: 95 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYAGSEGSVDGRKLAETEPEVDVEVYRRD 152
Query: 126 SRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSR 184
S+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTRT + + K+ SQ+V+ASPS+
Sbjct: 153 SKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRTDGGDIHIHKKKSQQVFASPSK 212
Query: 185 RRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGS 244
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GS
Sbjct: 213 HPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNMFQGVIFQGS 272
Query: 245 IRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
IRY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 273 IRYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 326
>gi|403282738|ref|XP_003932797.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Saimiri
boliviensis boliviensis]
Length = 404
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 165/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 88
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 89 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 148
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GSIR
Sbjct: 149 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNMFQGVIFQGSIR 208
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 209 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 260
>gi|358412566|ref|XP_001789220.2| PREDICTED: uncharacterized protein KIAA0930 [Bos taurus]
Length = 404
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 190/304 (62%), Gaps = 29/304 (9%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + DD+LF+VR+K S R + E EVEV+R+DS+
Sbjct: 31 FWTWMFSTYFMEKWAPR--QDDMLFYVRRKLAFAGSEGALDGRKAAEPEVEVEVYRRDSK 88
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + ++ SQ+V+ASPS+
Sbjct: 89 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHRKRSQQVFASPSKHP 148
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 149 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 208
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYG 306
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 209 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR----- 260
Query: 307 VETPTSEPGYCETDMWDSDWDDDPEDFYYYRHQRRLSDPSANIN----MFAKSI-WKGPV 361
V T + P C T+ D P + R + P+ N F+ S+ KGP
Sbjct: 261 VSTGDTSP--CGTEE-----DSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKGPR 313
Query: 362 NKTT 365
N+ T
Sbjct: 314 NRIT 317
>gi|395819588|ref|XP_003783164.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Otolemur
garnettii]
Length = 403
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 165/234 (70%), Gaps = 11/234 (4%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRN-----LPKFETEVEVFRKDSRK 128
+WT +F YF+ + D D+LF+VR+K S + E EVEV+R+DS+K
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYAGSETSTDGRKAEPEVEVEVYRRDSKK 88
Query: 129 LP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRM 187
LP +GDPD+DWEE+V LN+I+ + DY +T A+CTRT + + ++ SQ+V+ASPS+ M
Sbjct: 89 LPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRTDSGDIHIHRKKSQQVFASPSKHPM 148
Query: 188 DTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRY 247
D+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GSIRY
Sbjct: 149 DSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNMFQGVIFQGSIRY 208
Query: 248 DALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 209 EALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 259
>gi|90083154|dbj|BAE90659.1| unnamed protein product [Macaca fascicularis]
Length = 370
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 158/215 (73%), Gaps = 10/215 (4%)
Query: 94 DDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYLNM 146
DD+LF+VR+K + S R + E EVEV+R+DS+KLP +GDPD+DWEE+V LN+
Sbjct: 15 DDMLFYVRRKLAYSGSESGADGRKATEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLNL 74
Query: 147 IIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVD 206
I+ + DY +T A+CTR + + K+ SQ+V+ASPS+ MD+KGE +++YP + F +D
Sbjct: 75 ILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEESKISYPNIFFMID 134
Query: 207 NFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQ 266
+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIRY+ALK+VYD R SV+ + Q
Sbjct: 135 SFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMAQ 194
Query: 267 RMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 195 KMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 226
>gi|345776713|ref|XP_538331.3| PREDICTED: uncharacterized protein KIAA0930 [Canis lupus
familiaris]
Length = 403
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 164/234 (70%), Gaps = 11/234 (4%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRN-----LPKFETEVEVFRKDSRK 128
+WT +F YF+ + D D+LF+VR+K + E EVEV+R+DS+K
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYPGGEGSVDGRKAEPEVEVEVYRRDSKK 88
Query: 129 LP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRM 187
LP +GDPD+DWEE+V LN+I+ + DY +T A+CTRT + + K+ SQ+V+ASPS+ M
Sbjct: 89 LPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRTDGGDIHIHKKKSQQVFASPSKHPM 148
Query: 188 DTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRY 247
D+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GSIRY
Sbjct: 149 DSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNMFQGVIFQGSIRY 208
Query: 248 DALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 209 EALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 259
>gi|426394817|ref|XP_004063683.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 3
[Gorilla gorilla gorilla]
gi|31566150|gb|AAH53595.1| C22orf9 protein [Homo sapiens]
Length = 370
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 157/215 (73%), Gaps = 10/215 (4%)
Query: 94 DDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYLNM 146
DD+LF+VR+K + S R + E EVEV+R+DS+KLP +GDPD+DWEE+V LN+
Sbjct: 15 DDMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLNL 74
Query: 147 IIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVD 206
I+ + DY +T A+CTR + + K+ SQ+V+ASPS+ MD+KGE +++YP + F +D
Sbjct: 75 ILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEESKISYPNIFFMID 134
Query: 207 NFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQ 266
+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIRY+ALK+VYD R SV+ + Q
Sbjct: 135 SFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMAQ 194
Query: 267 RMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 195 KMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 226
>gi|350583704|ref|XP_003481569.1| PREDICTED: uncharacterized protein KIAA0930-like isoform 2 [Sus
scrofa]
Length = 404
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 166/235 (70%), Gaps = 12/235 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLP------KFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K S P + E EVEV+R+DS+
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLALAGSEGAPDGRKVTEPEVEVEVYRRDSK 88
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTRT + V K+ SQ+V+ASPS+
Sbjct: 89 KLPGLGDPDIDWEESVCLNLILQKLDYVVTCAVCTRTDSGDIHVHKKKSQQVFASPSKHP 148
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GSIR
Sbjct: 149 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFHGVIFQGSIR 208
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 209 YEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 260
>gi|427780875|gb|JAA55889.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 374
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 193/356 (54%), Gaps = 47/356 (13%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRNDMFLTQGTSYWTDLFVRYFLFQTDSNIDCDDLLF 98
++ L + EI+ R +E + + S+W D+F+R+FL S+ DDL+F
Sbjct: 11 ASNALSSVFAEISQLRTREATDITPSGFVVVTSASFWMDIFIRHFLCAEGSDQH-DDLVF 69
Query: 99 FVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYTLTLA 158
FV+K K S R +P+ ET V+VFR++S+KLPI D D+ WEETVYLN+I+ Q +YTLT A
Sbjct: 70 FVKKTACKASRRYVPRLETTVQVFRRNSKKLPIADLDLHWEETVYLNLIVQQLEYTLTAA 129
Query: 159 ICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVR 218
C RT +HLQVL+R SQ+VYASP+R M+ KG+ EE+ YP + F VDN+ E F + +R
Sbjct: 130 ACLRTGNQHLQVLRRRSQRVYASPTRHSMEDKGDTEEVAYPDIFFAVDNYEEAFQGLNLR 189
Query: 219 DGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSN 278
GE++CVEL A R G +++FLG + ++ L R AR S+ T R
Sbjct: 190 PGELLCVELCARCRDGPQAALLFLGCVAHEPLARTL-ARADASSSTTPR----------- 237
Query: 279 SRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDFYYYRH 338
R FV ++GPQG+G A++A+ + P+ E W P
Sbjct: 238 GRCHFVSLRGPQGRGQAQVALRR----ATAVPSQE------------WPCSP-------- 273
Query: 339 QRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRDEL 394
RR S+P GP+++ SE +G+D E+EA D+RD L
Sbjct: 274 WRRSSEPG-----LVPPPNPGPLHRCR----SERQGIDQCGTS-EELEADDLRDAL 319
>gi|357618708|gb|EHJ71589.1| hypothetical protein KGM_20827 [Danaus plexippus]
Length = 371
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 129/161 (80%), Gaps = 1/161 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++LAQVSC +V PK RPNEG+LFIN E+SPMA+PQFE RQTD +V +NR LEKC+K+
Sbjct: 53 TKILAQVSCEVVQPKQIRPNEGILFINVEISPMAAPQFEANRQTDLTVYLNRLLEKCYKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCIDLESLC+V EEKVW++RVD+ VLN+DGNL+ C SIA LA+LAHF+ PDVT +GD I
Sbjct: 113 SKCIDLESLCIVVEEKVWSLRVDIKVLNHDGNLIECASIATLASLAHFKRPDVTRSGDSI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE 614
IIH+ +EKDPIP + HYPV +++A+FN S P F E
Sbjct: 173 IIHTLSEKDPIPTVLYHYPVCVTFAIFNNNILVSD-PSFIE 212
>gi|427783115|gb|JAA57009.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 365
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 193/356 (54%), Gaps = 47/356 (13%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRNDMFLTQGTSYWTDLFVRYFLFQTDSNIDCDDLLF 98
++ L + EI+ R +E + + S+W D+F+R+FL S+ DDL+F
Sbjct: 11 ASNALSSVFAEISQLRTREATDITPSGFVVVTSASFWMDIFIRHFLCAEGSDQH-DDLVF 69
Query: 99 FVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMIIHQFDYTLTLA 158
FV+K K S R +P+ ET V+VFR++S+KLPI D D+ WEETVYLN+I+ Q +YTLT A
Sbjct: 70 FVKKTACKASRRYVPRLETTVQVFRRNSKKLPIADLDLHWEETVYLNLIVQQLEYTLTAA 129
Query: 159 ICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVR 218
C RT +HLQVL+R SQ+VYASP+R M+ KG+ EE+ YP + F VDN+ E F + +R
Sbjct: 130 ACLRTGNQHLQVLRRRSQRVYASPTRHSMEDKGDTEEVAYPDIFFAVDNYEEAFQGLNLR 189
Query: 219 DGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSN 278
GE++CVEL A R G +++FLG + ++ L R AR S+ T R
Sbjct: 190 PGELLCVELCARCRDGPQAALLFLGCVAHEPLARTL-ARADASSSTTPR----------- 237
Query: 279 SRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDFYYYRH 338
R FV ++GPQG+G A++A+ + P+ E W P
Sbjct: 238 GRCHFVSLRGPQGRGQAQVALRR----ATAVPSQE------------WPCSP-------- 273
Query: 339 QRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGVAEIEAGDMRDEL 394
RR S+P GP+++ SE +G+D E+EA D+RD L
Sbjct: 274 WRRSSEPG-----LVPPPNPGPLHRCR----SERQGIDQCGTS-EELEADDLRDAL 319
>gi|85701776|ref|NP_001028445.1| uncharacterized protein KIAA0930 homolog [Mus musculus]
gi|74207907|dbj|BAE29080.1| unnamed protein product [Mus musculus]
Length = 447
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 177/276 (64%), Gaps = 27/276 (9%)
Query: 42 TLEQLLEEINFQRAKE--KRQYLRNDMFLTQGTSYWTDLFVRYFLFQTDSNIDCDDLLFF 99
+L+ +L I +R + +R+ F +WT +F YF+ + D D+LF+
Sbjct: 40 SLQHMLRAIAEERGRLSLRREVCGLGCFKDDRIVFWTWMFSTYFMEKLAPRQD--DMLFY 97
Query: 100 VRKKYIKTSSRNLPKFETEVE-------------VFRKDSRKLP-IGDPDVDWEETVYLN 145
VR+K R P E ++ V+R+DS+KLP +GDPD+DWEE+V LN
Sbjct: 98 VRRK------RAYPGNEGTIDGRKAEAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLN 151
Query: 146 MIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTV 205
+I+ + DY +T A+CTR + + ++ SQ+V+ASPS+ MD+KGE +M+YP + F +
Sbjct: 152 LILQKLDYMVTCAVCTRADGGDIHIHRKKSQQVFASPSKHPMDSKGEESKMSYPNIFFMI 211
Query: 206 DNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFT 265
D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIRY+ALK+VYD R SV+ +
Sbjct: 212 DSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMA 271
Query: 266 QRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 272 QKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 304
>gi|50510715|dbj|BAD32343.1| mKIAA0930 protein [Mus musculus]
Length = 425
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 177/276 (64%), Gaps = 27/276 (9%)
Query: 42 TLEQLLEEINFQRAKE--KRQYLRNDMFLTQGTSYWTDLFVRYFLFQTDSNIDCDDLLFF 99
+L+ +L I +R + +R+ F +WT +F YF+ + D D+LF+
Sbjct: 16 SLQHMLRAIAEERGRLSLRREVCGLGCFKDDRIVFWTWMFSTYFMEKLAPRQD--DMLFY 73
Query: 100 VRKKYIKTSSRNLPKFETEVE-------------VFRKDSRKLP-IGDPDVDWEETVYLN 145
VR+K R P E ++ V+R+DS+KLP +GDPD+DWEE+V LN
Sbjct: 74 VRRK------RAYPGNEGTIDGRKAEAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLN 127
Query: 146 MIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTV 205
+I+ + DY +T A+CTR + + ++ SQ+V+ASPS+ MD+KGE +M+YP + F +
Sbjct: 128 LILQKLDYMVTCAVCTRADGGDIHIHRKKSQQVFASPSKHPMDSKGEESKMSYPNIFFMI 187
Query: 206 DNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFT 265
D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIRY+ALK+VYD R SV+ +
Sbjct: 188 DSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMA 247
Query: 266 QRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 248 QKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 280
>gi|74215288|dbj|BAE41862.1| unnamed protein product [Mus musculus]
Length = 447
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 177/276 (64%), Gaps = 27/276 (9%)
Query: 42 TLEQLLEEINFQRAKE--KRQYLRNDMFLTQGTSYWTDLFVRYFLFQTDSNIDCDDLLFF 99
+L+ +L I +R + +R+ F +WT +F YF+ + D D+LF+
Sbjct: 40 SLQHMLRAIAEERGRLSLRREVCGLGCFKDDRIVFWTWMFSTYFMEKLAPRQD--DMLFY 97
Query: 100 VRKKYIKTSSRNLPKFETEVE-------------VFRKDSRKLP-IGDPDVDWEETVYLN 145
VR+K R P E ++ V+R+DS+KLP +GDPD+DWEE+V LN
Sbjct: 98 VRRK------RAYPGNEGTIDGRKAEAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLN 151
Query: 146 MIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTV 205
+I+ + DY +T A+CTR + + ++ SQ+V+ASPS+ MD++GE +M+YP + F +
Sbjct: 152 LILQKLDYMVTCAVCTRADGGDIHIHRKKSQQVFASPSKHPMDSEGEESKMSYPNIFFMI 211
Query: 206 DNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFT 265
D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIRY+ALK+VYD R SV+ +
Sbjct: 212 DSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMA 271
Query: 266 QRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 272 QKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 304
>gi|402534533|ref|NP_001257976.1| uncharacterized protein KIAA0930 homolog [Rattus norvegicus]
gi|119371896|sp|Q4G008.2|K0930_RAT RecName: Full=Uncharacterized protein KIAA0930 homolog
gi|149065720|gb|EDM15593.1| similar to CG9646-PA [Rattus norvegicus]
Length = 404
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 166/236 (70%), Gaps = 13/236 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS-------RNLPKFETEVEVFRKDS 126
+WT +F YF+ + DD+LF+VR+K T S + + E EVEV+R+DS
Sbjct: 31 FWTWMFSTYFMEKLAPR--QDDMLFYVRRKRAYTGSESTADGRKAEAEPEVEVEVYRRDS 88
Query: 127 RKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRR 185
+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + ++ SQ+V+ASPS+
Sbjct: 89 KKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHRKKSQQVFASPSKH 148
Query: 186 RMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSI 245
MD+KGE +M+YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GSI
Sbjct: 149 PMDSKGEESKMSYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNMFQGVIFQGSI 208
Query: 246 RYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
RY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 209 RYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 261
>gi|351706872|gb|EHB09791.1| hypothetical protein GW7_03015 [Heterocephalus glaber]
Length = 554
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 168/237 (70%), Gaps = 14/237 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEV--FRKD 125
+WT +F YF+ + D D+LF+VR+K + S R LP+ E EVEV +R+D
Sbjct: 136 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESSVDGRKLPEAEPEVEVEVYRRD 193
Query: 126 SRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSR 184
S+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 194 SKKLPGLGDPDIDWEESVCLNLILQKLDYVVTCAVCTRADGGDIHIHKKKSQQVFASPSK 253
Query: 185 RRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGS 244
MD+KGE +M+YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GS
Sbjct: 254 HPMDSKGEESKMSYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTTMSQGVIFQGS 313
Query: 245 IRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
IRY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 314 IRYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 367
>gi|198417594|ref|XP_002130649.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 384
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 121/273 (44%), Positives = 181/273 (66%), Gaps = 22/273 (8%)
Query: 35 SILKSTTTLEQLLEEINFQRAKEKRQYLRNDMFLTQG-TSYWTDLFVRYFLFQTDSNIDC 93
+ L ++++ +++ EI K+ ++D F+ ++WT +F +YFL +N
Sbjct: 2 ATLPASSSFMEMMNEIVSNDQKQ-----QSDGFVNVAPIAFWTQIFAKYFLHA--NNPHH 54
Query: 94 DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFD 152
DDLLF+V+K S + EV V+R++S P +GDP DW ETVYLNMII Q +
Sbjct: 55 DDLLFYVKKTESLES-------QNEVVVYRRESMNAPGLGDPAYDWTETVYLNMIIQQME 107
Query: 153 YTLTLAICTRT---SPKH-LQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNF 208
YTLT AICT+ +PK + V K+ SQ VYASPSR M+ K EM+YP + FT+D+F
Sbjct: 108 YTLTCAICTKAETGNPKGDVTVHKKVSQHVYASPSRHNMENKEGGTEMSYPNIFFTIDSF 167
Query: 209 NEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRM 268
+EV+ D+++ +GE+VCVE++ASD++ + SVIFLGS++YD+L +VY+ RT NKFTQ M
Sbjct: 168 DEVWSDLILHEGEIVCVEVIASDKSKKLSSVIFLGSVKYDSLVKVYERRTKAPNKFTQFM 227
Query: 269 SFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
+ G++ ++ +EFV+MKGP GKG+AEMA+ K
Sbjct: 228 TLGLY--KTSDSVEFVRMKGPGGKGYAEMAIQK 258
>gi|354500847|ref|XP_003512508.1| PREDICTED: uncharacterized protein KIAA0930-like [Cricetulus
griseus]
Length = 385
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 165/242 (68%), Gaps = 25/242 (10%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVE------------- 120
+WT +F YF+ + D D+LF+VR+K R P ++ V+
Sbjct: 11 FWTWMFSTYFMEKLAPRQD--DMLFYVRRK------RAYPGNDSSVDGRKAEAEPEVEVE 62
Query: 121 VFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVY 179
V+R+DS+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + ++ SQ+V+
Sbjct: 63 VYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHRKKSQQVF 122
Query: 180 ASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSV 239
ASPS+ MD+KGE +M+YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + V
Sbjct: 123 ASPSKHPMDSKGEESKMSYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGV 182
Query: 240 IFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAV 299
IF GSIRY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV
Sbjct: 183 IFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAV 239
Query: 300 TK 301
++
Sbjct: 240 SR 241
>gi|355735330|gb|AES11635.1| hypothetical protein [Mustela putorius furo]
Length = 397
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 172/256 (67%), Gaps = 19/256 (7%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS--------RNLPKFETEVEVFRKD 125
+WT +F YF+ + D D+LF+VR+K S R + E EVEV+R+D
Sbjct: 22 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYPGSEASVDGRKRAEAEPEVEVEVYRRD 79
Query: 126 SRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSR 184
S+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTRT + + K+ SQ+V+ASPS+
Sbjct: 80 SKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRTDGGDIHIHKKKSQQVFASPSK 139
Query: 185 RRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGS 244
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GS
Sbjct: 140 HPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNLFQGVIFQGS 199
Query: 245 IRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKG 304
IRY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 200 IRYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR--- 253
Query: 305 YGVETPTSEPGYCETD 320
V T + P E D
Sbjct: 254 --VSTGDTSPCGTEED 267
>gi|350583702|ref|XP_003481568.1| PREDICTED: uncharacterized protein KIAA0930-like isoform 1 [Sus
scrofa]
Length = 372
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 157/217 (72%), Gaps = 12/217 (5%)
Query: 94 DDLLFFVRKKYIKTSSRNLP--------KFETEVEVFRKDSRKLP-IGDPDVDWEETVYL 144
DD+LF+VR+K S P + E EVEV+R+DS+KLP +GDPD+DWEE+V L
Sbjct: 15 DDMLFYVRRKLALAGSEGAPDGRKPAEAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCL 74
Query: 145 NMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFT 204
N+I+ + DY +T A+CTRT + V K+ SQ+V+ASPS+ MD+KGE +++YP + F
Sbjct: 75 NLILQKLDYVVTCAVCTRTDSGDIHVHKKKSQQVFASPSKHPMDSKGEESKISYPNIFFM 134
Query: 205 VDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKF 264
+D+F EVF D+ V +GEMVCVELVASD+ + VIF GSIRY+ALK+VYD R SV+ +
Sbjct: 135 IDSFEEVFSDMTVGEGEMVCVELVASDKTNTFHGVIFQGSIRYEALKKVYDNRVSVAARM 194
Query: 265 TQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 195 AQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 228
>gi|119371895|sp|Q3UE31.2|K0930_MOUSE RecName: Full=Uncharacterized protein KIAA0930 homolog
gi|148672496|gb|EDL04443.1| mCG13582 [Mus musculus]
Length = 404
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 164/242 (67%), Gaps = 25/242 (10%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVE------------- 120
+WT +F YF+ + D D+LF+VR+K R P E ++
Sbjct: 31 FWTWMFSTYFMEKLAPRQD--DMLFYVRRK------RAYPGNEGTIDGRKAEAEPEVEVE 82
Query: 121 VFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVY 179
V+R+DS+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + ++ SQ+V+
Sbjct: 83 VYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHRKKSQQVF 142
Query: 180 ASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSV 239
ASPS+ MD+KGE +M+YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + V
Sbjct: 143 ASPSKHPMDSKGEESKMSYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGV 202
Query: 240 IFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAV 299
IF GSIRY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV
Sbjct: 203 IFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAV 259
Query: 300 TK 301
++
Sbjct: 260 SR 261
>gi|417410514|gb|JAA51729.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 415
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 188/295 (63%), Gaps = 31/295 (10%)
Query: 42 TLEQLLEEINFQRAKE--KRQ-----YLRNDMFLTQGTSYWTDLFVRYFLFQTDSNIDCD 94
+L+ +L I +R + +R+ Y+++D ++WT +F YF+ + D
Sbjct: 6 SLQHMLRAIAEERGRVSLRREVCGLGYVKDDRI-----AFWTWMFSTYFMEKWAPR--QD 58
Query: 95 DLLFFVRKKYIKTSSRN--------LPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYLN 145
D+LF+VR+K + + E EVEV+R+DS+KLP +GDPD+DWEE+V LN
Sbjct: 59 DMLFYVRRKRAFAGGESGGDARKVAEAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLN 118
Query: 146 MIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTV 205
+I+ + DY +T A+CTR + + K+ SQ+V+ASPSR MD+KGE +++YP + F +
Sbjct: 119 LILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSRHPMDSKGEESQISYPNIFFMI 178
Query: 206 DNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFT 265
D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIRY+ALK+VYD R SV+ +
Sbjct: 179 DSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMA 238
Query: 266 QRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPGYCETD 320
Q+MSFG + N+ +EFV+MKGPQGKG AEMAV + V T + P E D
Sbjct: 239 QKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVNR-----VSTGDTSPCGTEED 285
>gi|149436609|ref|XP_001511180.1| PREDICTED: uncharacterized protein KIAA0930-like [Ornithorhynchus
anatinus]
Length = 331
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 145/187 (77%), Gaps = 4/187 (2%)
Query: 116 ETEVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRH 174
E EVEV+R+DS+KLP +GDPD+DWEE VYLN+++ + DYT+T A+CTR+ + + ++
Sbjct: 4 EVEVEVYRRDSKKLPGLGDPDMDWEECVYLNLVLQKLDYTVTCAVCTRSDSGDIHIHRKK 63
Query: 175 SQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAG 234
SQ+V+ASPS+ MD+KGE +++YP + F +DNF EVF D+ V +GEMVCVELVASD+
Sbjct: 64 SQQVFASPSKHPMDSKGEESKISYPNIFFMIDNFEEVFSDLTVGEGEMVCVELVASDKTD 123
Query: 235 SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGF 294
+ + VIF GSIRY+AL++VYD R SV+ + QR+SFG + + +EFV+MKGPQGKG
Sbjct: 124 TFQGVIFQGSIRYEALRKVYDNRVSVAARVAQRVSFGFYKYHP---MEFVRMKGPQGKGH 180
Query: 295 AEMAVTK 301
AEMAV++
Sbjct: 181 AEMAVSR 187
>gi|344298531|ref|XP_003420945.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
KIAA0930-like [Loxodonta africana]
Length = 407
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 166/237 (70%), Gaps = 14/237 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRN--------LPKFETEVEVFRKD 125
+WT +F YF+ + D D+LF+VR+K S + + E EVEV+R+D
Sbjct: 33 FWTWMFSTYFMEKWAPQQD--DMLFYVRRKRAFAGSESGTEEGKVAEMEPEVEVEVYRRD 90
Query: 126 SRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSR 184
S+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+
Sbjct: 91 SKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRSDGGDIHIHKKKSQQVFASPSK 150
Query: 185 RRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGS 244
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GS
Sbjct: 151 HPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNMFQGVIFQGS 210
Query: 245 IRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
IRY+ALK+VYD R SV+ + Q+MSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 211 IRYEALKKVYDNRVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 264
>gi|4589504|dbj|BAA76774.1| KIAA0930 protein [Homo sapiens]
Length = 348
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 143/187 (76%), Gaps = 4/187 (2%)
Query: 116 ETEVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRH 174
E EVEV+R+DS+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+
Sbjct: 21 EVEVEVYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKK 80
Query: 175 SQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAG 234
SQ+V+ASPS+ MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+
Sbjct: 81 SQQVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTN 140
Query: 235 SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGF 294
+ + VIF GSIRY+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG
Sbjct: 141 TFQGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGH 197
Query: 295 AEMAVTK 301
AEMAV++
Sbjct: 198 AEMAVSR 204
>gi|312087241|ref|XP_003145393.1| hypothetical protein LOAG_09818 [Loa loa]
Length = 431
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 167/245 (68%), Gaps = 12/245 (4%)
Query: 75 WTDLFVRYFLFQTDSNI-DC----DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKL 129
W LF + T N +C DD+L++V + + + + + +++V+R+ S
Sbjct: 116 WCKLFADFIAGSTYCNAKNCAAHSDDMLWYVSMQQLNRDF-CIGQEDGQLQVYRRQSPNK 174
Query: 130 PI-GDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMD 188
P+ DP ++WEETV LN+I+ Q D+ +T A+C +TSP++LQ+L+++ Q+VY SPS+RRMD
Sbjct: 175 PVLNDPLINWEETVCLNLILQQLDFQVTCAVCIKTSPQNLQILRKNCQRVYPSPSKRRMD 234
Query: 189 TKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYD 248
+KGE EE+TYP + F +D+F ++F D++VRDGE VCVELVA DR + ++VIFLGSIRY+
Sbjct: 235 SKGECEEITYPKIYFAIDDFEQIFSDVVVRDGECVCVELVARDRRKNCEAVIFLGSIRYE 294
Query: 249 ALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVE 308
LK+ YD+R S S ++ Q++ I N R EFV+M+GP GKG+AEMAV + G E
Sbjct: 295 VLKQAYDSRASFSWQWAQKL---ITPN--QRRREFVRMRGPHGKGYAEMAVMRLANCGYE 349
Query: 309 TPTSE 313
TP SE
Sbjct: 350 TPVSE 354
>gi|431899987|gb|ELK07922.1| hypothetical protein PAL_GLEAN10007155, partial [Pteropus alecto]
Length = 391
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 166/239 (69%), Gaps = 16/239 (6%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEV----FR 123
+WT +F YF+ + D D+LF+VR+K S R L + E EVEV +R
Sbjct: 14 FWTWMFSTYFMERGAPRQD--DMLFYVRRKRAFAGSEGGADRRKLAEAEPEVEVEVEVYR 71
Query: 124 KDSRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASP 182
+DS+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASP
Sbjct: 72 RDSKKLPGLGDPDIDWEESVCLNLILQKLDYVVTCAVCTRADGGDIHIHKKKSQQVFASP 131
Query: 183 SRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFL 242
S+ MD+KGE ++YP + F +D+F EVF D+ V +GEMVCVELVASD++ + + VIF
Sbjct: 132 SKHPMDSKGEESRISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKSNTFQGVIFQ 191
Query: 243 GSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
GSIRY+ALK+VYD R SV+ + Q+MS G + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 192 GSIRYEALKKVYDNRVSVAARVAQKMSLGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 247
>gi|440905579|gb|ELR55948.1| hypothetical protein M91_12339, partial [Bos grunniens mutus]
Length = 397
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 166/237 (70%), Gaps = 14/237 (5%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEV--FRKD 125
+WT +F YF+ + D D+LF+VR+K S R L + E EVEV +R+D
Sbjct: 22 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAFAGSEGALDGRKLAEAEPEVEVEVYRRD 79
Query: 126 SRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSR 184
S+KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + ++ SQ+V+ASPS+
Sbjct: 80 SKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHRKRSQQVFASPSK 139
Query: 185 RRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGS 244
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GS
Sbjct: 140 HPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGS 199
Query: 245 IRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
IRY+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 200 IRYEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 253
>gi|341897025|gb|EGT52960.1| hypothetical protein CAEBREN_21304 [Caenorhabditis brenneri]
Length = 405
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/245 (44%), Positives = 165/245 (67%), Gaps = 12/245 (4%)
Query: 75 WTDLFVRY-----FLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKL 129
W LF+ + + T DD++++V + + T+S + + ++VFR+ S+
Sbjct: 74 WAKLFMEFIIGNAYCQSTKCVAQSDDMIWYVHQAKL-TNSFYIQGNQNLLQVFRRHSKNQ 132
Query: 130 PI-GDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMD 188
P D +WEETV LN+I+ Q D+ +T A+CT+T P++LQ+++++ Q+V+ SPSRRRMD
Sbjct: 133 PTPCDDSYNWEETVCLNIIMQQIDFYVTCAVCTKTGPQNLQIIRKNCQRVFPSPSRRRMD 192
Query: 189 TKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYD 248
+KGE EE+TYP + F +D F E+F+D++VRDGE VCVELVA DR + +SV+FLGSIRY+
Sbjct: 193 SKGENEEITYPKLYFAIDGFEEIFNDVIVRDGECVCVELVARDRQKTRESVVFLGSIRYE 252
Query: 249 ALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVE 308
LK+VYD + S + ++ Q++ + R EFV+M+GPQGKG+AEMAV + G E
Sbjct: 253 ILKQVYDTKASSTWQWAQKL-----MKAGDRRQEFVRMRGPQGKGYAEMAVARVPNCGYE 307
Query: 309 TPTSE 313
TP +E
Sbjct: 308 TPLTE 312
>gi|332027278|gb|EGI67362.1| Exosome complex exonuclease RRP45 [Acromyrmex echinatior]
Length = 390
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 127/151 (84%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++ +AQVSC++ PKA+RPNEG++ IN EL+P+A+ FE GRQ++ +++INR LEKCFK+
Sbjct: 53 TKAVAQVSCDIQQPKASRPNEGMIRINVELAPLAAQHFEGGRQSEAAILINRQLEKCFKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+DLESLC+VA++KVWN+R+D+N++N+DGNL+ C SIA LAAL HF PDVTSTG++I
Sbjct: 113 SKCVDLESLCIVADKKVWNLRIDINIINHDGNLVDCASIATLAALMHFHRPDVTSTGEEI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
IIH A+EKD +P+T+ HYPV IS+ F G+
Sbjct: 173 IIHPASEKDFLPLTLFHYPVCISFITFKSGN 203
>gi|347967668|ref|XP_312616.5| AGAP002348-PA [Anopheles gambiae str. PEST]
gi|333468355|gb|EAA07626.5| AGAP002348-PA [Anopheles gambiae str. PEST]
Length = 439
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 146/225 (64%), Gaps = 16/225 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ LA+++C +V PKATRPNEG+LF+N EL PMA+P F+ GRQ+D V +NR LE+ K+
Sbjct: 53 TRALARITCEVVEPKATRPNEGMLFLNVELGPMAAPHFDGGRQSDECVQLNRILERALKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S C+DLESLC+V+EEKVW +RVD+ VLN++GN + CCSIAAL ALAHF+ PD+T G+ +
Sbjct: 113 SNCVDLESLCLVSEEKVWKLRVDVTVLNHEGNAIDCCSIAALTALAHFKRPDITVDGEDV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQKLGV 633
I+H+ EKDP+ +T+ HYP+ +SYA+FN G P + E +++ R G+
Sbjct: 173 IVHTIEEKDPLKVTLFHYPLCVSYAIFNQGKIAIADPTYLE-------ERVAEARMVFGL 225
Query: 634 DSAYANLVN--------KTDRILLDEGEKDSGETKVKVEKVGPGI 670
+S Y L + +LL K S ++ VE++ I
Sbjct: 226 NS-YGELCGLHLGGTTLTSAELLLRTSAKASKRARLVVERIKAAI 269
>gi|307214871|gb|EFN89739.1| Exosome complex exonuclease RRP45 [Harpegnathos saltator]
Length = 390
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 126/151 (83%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++ +AQVSC++ PK +RPNEG++ IN ELS +A+ FE+GRQ++ +VMI+R LEKCFK+
Sbjct: 53 TKAIAQVSCDIQQPKISRPNEGMIHINVELSQLAAQNFESGRQSEAAVMISRQLEKCFKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+DLESLC+VA++KVWN+RVD+N++N+DGNL+ C SIA LAAL+HF PDVTSTG++I
Sbjct: 113 SKCVDLESLCIVADKKVWNIRVDINIINHDGNLIDCASIATLAALSHFHRPDVTSTGEEI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
IIH A+EKD + +T+ HYPV IS+ F G+
Sbjct: 173 IIHPASEKDFLSLTLFHYPVCISFITFESGN 203
>gi|328790286|ref|XP_624243.3| PREDICTED: exosome complex exonuclease RRP45-like [Apis mellifera]
Length = 414
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 126/151 (83%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+AQV+C++ PK +RPNEG+L IN EL+PMA+ F++GRQ++ S++I+R LEKC+++
Sbjct: 53 TRVIAQVTCDIQQPKTSRPNEGMLHINVELNPMAAQHFDSGRQSEISILISRQLEKCYQD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCIDLESLC++A++KVWN+RVD+NV+N+DGNL+ C SIA LAAL+HF PDVTS G+ I
Sbjct: 113 SKCIDLESLCIIADKKVWNLRVDINVINHDGNLIDCASIATLAALSHFHRPDVTSNGEDI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
I+H +EKDP+P+T+ HYPV +S+ F G+
Sbjct: 173 IVHPFSEKDPLPLTLYHYPVCVSFITFESGN 203
>gi|350402638|ref|XP_003486552.1| PREDICTED: exosome complex component RRP45-like [Bombus impatiens]
Length = 410
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 125/151 (82%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+AQV+C++ PK +RPNEG+L IN EL+PMA+ F+ GRQ++ SV+I+R LEKC+++
Sbjct: 53 TRVIAQVTCDIQQPKTSRPNEGMLHINVELNPMAAQHFDGGRQSEISVLISRQLEKCYQD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCIDLESLC++A+++VWN+RVD+NV+N+DGNL+ C SIA LAAL+HF PDVTS G+ I
Sbjct: 113 SKCIDLESLCIIADKQVWNLRVDVNVINHDGNLIDCASIATLAALSHFHRPDVTSNGEDI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
I+H +EKDP+P+T+ HYPV +S+ F GS
Sbjct: 173 IVHPFSEKDPLPLTLYHYPVCVSFITFESGS 203
>gi|340728541|ref|XP_003402580.1| PREDICTED: exosome complex component RRP45-like [Bombus terrestris]
Length = 410
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 125/151 (82%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+AQV+C++ PK +RPNEG+L IN EL+PMA+ F+ GRQ++ S++I+R LEKC+++
Sbjct: 53 TRVIAQVTCDIQQPKTSRPNEGMLHINVELNPMAAQHFDGGRQSEISILISRQLEKCYQD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCIDLESLC++A+++VWN+RVD+NV+N+DGNL+ C SIA LAAL+HF PDVTS G+ I
Sbjct: 113 SKCIDLESLCIIADKQVWNLRVDVNVINHDGNLIDCASIATLAALSHFHRPDVTSNGEDI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
I+H +EKDP+P+T+ HYPV +S+ F GS
Sbjct: 173 IVHPFSEKDPLPLTLYHYPVCVSFITFESGS 203
>gi|307180205|gb|EFN68238.1| Exosome complex exonuclease RRP45 [Camponotus floridanus]
Length = 387
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 126/151 (83%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++ +AQVSC++ PK RPNEG ++IN EL+P+A+ FE+GRQ++ +++I+R LEKCFK+
Sbjct: 53 TKAIAQVSCDIRQPKTFRPNEGTIYINVELAPLAAQHFESGRQSEAAILISRQLEKCFKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+DLESLC+VA++KVW++R+D+N++N+DGNL+ C SIA LAAL HF PDVTSTG++I
Sbjct: 113 SKCVDLESLCIVADKKVWSLRIDINIINHDGNLIDCASIAVLAALMHFHRPDVTSTGEEI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
IIH A+EKD +P+T+ HYPV +S+ F G+
Sbjct: 173 IIHPASEKDFLPLTLFHYPVCVSFITFENGN 203
>gi|383858184|ref|XP_003704582.1| PREDICTED: exosome complex component RRP45-like [Megachile
rotundata]
Length = 410
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 122/151 (80%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +AQV+C++ PK +RPNEG+L IN EL+ M + F+ G+Q + SV+I+R LEKCFK+
Sbjct: 53 TRAVAQVTCDIQQPKTSRPNEGMLHINVELNAMVTQNFDAGKQAEVSVLISRQLEKCFKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCIDLESLC++A++KVWN+RVD+N++N+DGNL+ C SIA LAAL+HF PDVTSTG++I
Sbjct: 113 SKCIDLESLCIIADKKVWNLRVDINIINHDGNLIDCASIATLAALSHFHRPDVTSTGEEI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
IIH EKDP+P+TI HYPV +S+ F G+
Sbjct: 173 IIHPFCEKDPLPLTIYHYPVCVSFITFESGN 203
>gi|380025250|ref|XP_003696390.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex component
RRP45-like [Apis florea]
Length = 411
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 125/151 (82%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+AQV+C++ PK +RPNEG+L IN EL+PMA+ F++GRQ++ S++I+R LEKC+++
Sbjct: 53 TRVIAQVTCDIQQPKTSRPNEGMLHINVELNPMAAQHFDSGRQSEISILISRQLEKCYQD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCIDLESLC++A++KVWN+RVD+NV+N+D NL+ C SIA LAAL+HF PDVTS G+ I
Sbjct: 113 SKCIDLESLCIIADKKVWNLRVDINVINHDXNLIDCASIATLAALSHFHRPDVTSNGEDI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
I+H +EKDP+P+T+ HYPV +S+ F G+
Sbjct: 173 IVHPFSEKDPLPLTLYHYPVCVSFITFESGN 203
>gi|322799219|gb|EFZ20634.1| hypothetical protein SINV_00940 [Solenopsis invicta]
Length = 384
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 125/151 (82%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ QVSC++ PKA+RPNEG + IN EL+P+A+ FE+GR ++ +++I+R LEKCFK+
Sbjct: 53 TRVVTQVSCDIQQPKASRPNEGTIRINVELAPLAAQHFESGRPSEAAILISRQLEKCFKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+DLESLC+VA++KVWN+R+D+NV+N+DGNL+ C S+A LAAL HF PDVTSTG+++
Sbjct: 113 SKCVDLESLCIVADKKVWNLRIDVNVINHDGNLIDCASVATLAALIHFHRPDVTSTGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
IIH A+EKD +P+T+ HYP+ IS+ F G+
Sbjct: 173 IIHPASEKDFLPLTLFHYPICISFITFQSGN 203
>gi|156551918|ref|XP_001607202.1| PREDICTED: exosome complex component RRP45-like [Nasonia
vitripennis]
Length = 412
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 121/146 (82%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCI 517
AQVSC++ PKA+RPNEG+L +N EL+P+A+ FE+GRQ++ + +INR LEK KES+C+
Sbjct: 57 AQVSCDIQQPKASRPNEGMLHVNVELNPLAAQHFESGRQSEAAALINRQLEKSLKESRCV 116
Query: 518 DLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHS 577
DLESLC+VA++KVWN+RVD++++N+DGNL+ C SIAALAAL HF PDVTSTG+++IIH
Sbjct: 117 DLESLCIVADKKVWNIRVDVSIINHDGNLIDCASIAALAALMHFHRPDVTSTGEEVIIHP 176
Query: 578 AAEKDPIPMTILHYPVTISYAVFNGG 603
EKDP+P+T+ H+PV IS+ F G
Sbjct: 177 FTEKDPLPLTLYHHPVCISFITFENG 202
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 26/143 (18%)
Query: 611 GFTECIQLDTALALSQDRQ--KLGVDSAYANLVNKTDRILLDEGEKDSGETKVKVEKVGP 668
F+ CI D ++ +R KL S + + ++I+ D+ + D V++ VG
Sbjct: 287 SFSHCIATDKITSMMSERINIKLTTWSNCHKIEDMENQIMDDDQDAD-----VEISNVGD 341
Query: 669 GIADLISKSDIEPSGIKNQWVS--SSDDESSAEDDKAETPRVQSVEDEGDEVMLVDSVNP 726
G A+LI K+ +G KN W S SSD+E +D V+ VE++ P
Sbjct: 342 GTAELIMKNADVGTGGKNTWNSSDSSDNEFEHHND------VEFVEEK-----------P 384
Query: 727 RTKVREEVVLSGDSEEEDTVMLT 749
KV + + LSGDSEEE T +L+
Sbjct: 385 TKKVLDNIELSGDSEEESTTVLS 407
>gi|91080613|ref|XP_974147.1| PREDICTED: similar to AGAP002348-PA [Tribolium castaneum]
gi|270005510|gb|EFA01958.1| hypothetical protein TcasGA2_TC007574 [Tribolium castaneum]
Length = 389
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 124/171 (72%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLAQ SC + PK++RP+EG+L IN EL+P+A+P FE GRQ++ SV +NR LEKC K+
Sbjct: 56 TKVLAQTSCEIQQPKSSRPSEGILNINIELNPLAAPHFEAGRQSELSVQLNRLLEKCVKD 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SK +DLESLC+ EKVW ++VD+NVLN++GN+L C SIA LA+L HFR PDVT G++
Sbjct: 116 SKAVDLESLCIKTNEKVWALKVDINVLNHEGNILDCASIAMLASLTHFRRPDVTCDGEEF 175
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALAL 624
IIHS ++DPIP I HYPV I+YA+FNGG P E D L +
Sbjct: 176 IIHSYQQRDPIPTVIHHYPVCITYAIFNGGEYILADPSLLEEGSADAMLTI 226
>gi|410930716|ref|XP_003978744.1| PREDICTED: exosome complex component RRP45-like [Takifugu rubripes]
Length = 386
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 140/206 (67%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVKPSE--VLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ I G C +V+ E V+AQVSC +V PK +RPNEG+LF N ELS
Sbjct: 24 LDGRQTYDYRRIKVSFGADYGCCFVELGETRVMAQVSCELVAPKESRPNEGILFFNIELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
PMASP FE GRQ++ SV +NR LE+C + SKCID ESLCVV+ EKVW +RVD+++LN+DG
Sbjct: 84 PMASPAFEAGRQSELSVKLNRQLERCLRNSKCIDTESLCVVSGEKVWQIRVDVHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
NL+ SIAA+ AL+HFR PDV+S G++I + S E+DPIP+ I H P+++S++ F G+
Sbjct: 144 NLMDAASIAAITALSHFRRPDVSSVGEEITVFSPEERDPIPLCIYHMPISVSFSFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPCEREERVMDGLLMIAMNKHR 229
>gi|443726519|gb|ELU13639.1| hypothetical protein CAPTEDRAFT_176766 [Capitella teleta]
Length = 340
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 169/273 (61%), Gaps = 15/273 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETG-RQTDTSVMINRFLEKCFK 512
S V+ QVSC + PK TRP+EG+LF+N ELSPMASP FE G R +D V +NR LE+C K
Sbjct: 53 SIVMTQVSCEVTPPKQTRPSEGILFVNVELSPMASPTFEPGGRMSDFGVELNRLLERCLK 112
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
ES+C+D ESLC++A KVW +RVD +VLNYDGNL+ CCS +A+AALAHFR PDV+ +G++
Sbjct: 113 ESRCVDTESLCIMAGLKVWTIRVDCHVLNYDGNLVDCCSASAIAALAHFRRPDVSVSGEE 172
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK-L 631
+ IH+ E+DPIP++I H P+ +++A F+ G P E +D + + ++ + +
Sbjct: 173 VTIHTLDERDPIPLSIHHMPLCVTFAFFSQGKYLLVDPSLKEEKVMDGKMVIGMNKHREI 232
Query: 632 GVDSAYANLVNKTDRILLDEGEKDSGETKVKVEKVGPGI-----ADLISKSDIEPSGIKN 686
N++ D++L + S VKV ++ I AD +++S +P G
Sbjct: 233 CTLQMSGNMLIMKDQVL-----RCSNIAVVKVTEITELIQKSLQADSLARSKGQPFGFP- 286
Query: 687 QWVSSSDDESSAEDDKAETPRVQSVEDEGDEVM 719
+ + +A + K+E V +E++ ++++
Sbjct: 287 --AAIETRKVTANEKKSEVIDVVGIEEKAEQIV 317
>gi|289740851|gb|ADD19173.1| exosomal 3'-5' exoribonuclease complex subunit Rrp45 [Glossina
morsitans morsitans]
Length = 404
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 126/181 (69%), Gaps = 9/181 (4%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
+W S+ GE ++VL QVS + PKATRPNEG+L IN EL PMA+ FE
Sbjct: 42 DWGSVIVALGE---------TKVLGQVSSELGEPKATRPNEGILHINVELGPMAAAHFEA 92
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
GR + +V INR LE+ FK+S+ IDLESLCV++EE+VW +RVDLNVLN++GNL+ CCS+A
Sbjct: 93 GRNCELTVQINRTLERTFKDSRAIDLESLCVISEERVWMLRVDLNVLNHEGNLIDCCSVA 152
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFT 613
L ALAHFR PDV+ D+I IH++AEK+P+ M + HYPV +SY +F+GG P
Sbjct: 153 TLCALAHFRRPDVSVIEDEIRIHTSAEKEPLKMVMHHYPVCVSYVIFDGGRIAVADPTVA 212
Query: 614 E 614
E
Sbjct: 213 E 213
>gi|443717730|gb|ELU08658.1| hypothetical protein CAPTEDRAFT_228278 [Capitella teleta]
Length = 272
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 155/237 (65%), Gaps = 14/237 (5%)
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD KG EE+TYP + FTVDNF E F DI+VRD EMV VEL+A DR G+ + VIFLGSIR
Sbjct: 1 MDGKGTGEEITYPNIFFTVDNFEEAFADIVVRDSEMVVVELIAKDRHGTFQGVIFLGSIR 60
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYG 306
YD+LKRVYD R S+S++ QRMS G F S+ R+EFV+M+GPQ KG AEMAV++ G G
Sbjct: 61 YDSLKRVYDTRASMSHRMAQRMSLGWF--KSHKRVEFVRMRGPQSKGHAEMAVSRILGSG 118
Query: 307 VETPTSEPGYCETDMWDSDWDDDPEDFYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTA 366
ETP P + D+D++ E+ Y QRR+SDPS + + F + +K
Sbjct: 119 PETPDQTPNTENFPV--EDFDNNQENGY---SQRRMSDPSQSWSHFIRGSFK---QSGIR 170
Query: 367 KAVSEDEGLDSLAHGVAEIEAGDMRDELDDGA--YNPLWTMRGFTQTFHFWKESKRA 421
K+ SE E +D++ G E+EAG++ DE D+ + YN + + F Q +H++KE KRA
Sbjct: 171 KSRSETENVDTVG-GCTEVEAGNIEDEFDEESEHYNGFFG-KSFGQAWHWFKERKRA 225
>gi|348521108|ref|XP_003448068.1| PREDICTED: exosome complex component RRP45-like [Oreochromis
niloticus]
Length = 410
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 139/214 (64%), Gaps = 2/214 (0%)
Query: 419 KRAQDWTDVDFMSSENWTSISAENGEAVWCPWV--KPSEVLAQVSCNMVIPKATRPNEGL 476
K ++ +D + ++ I G C +V + V+AQVSC +V PK RPNEG+
Sbjct: 16 KAIEEKKRLDGRQTYDYRKIKISFGTDYGCCFVDLGQTRVMAQVSCELVAPKENRPNEGI 75
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
+F N ELSPMASP FE GRQ++ SV +NR LE+C + SKCID ESLCVV+ EKVW +RVD
Sbjct: 76 MFFNIELSPMASPGFEQGRQSELSVKLNRQLERCLRNSKCIDTESLCVVSGEKVWQIRVD 135
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
++ LN DGNL+ SIAA+ AL HFR PDV++ G ++ ++S E+DPIP++I H P+++S
Sbjct: 136 VHTLNNDGNLMDAASIAAITALCHFRRPDVSTQGQEVTVYSPEERDPIPLSIYHMPISVS 195
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+A F G+ P E +D L ++ ++ +
Sbjct: 196 FAFFQQGTYLLVDPCEREERVMDGLLVIAMNKHR 229
>gi|47213776|emb|CAF92665.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 141/214 (65%), Gaps = 2/214 (0%)
Query: 419 KRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSE--VLAQVSCNMVIPKATRPNEGL 476
K ++ +D + ++ I G C +V+ E V+AQVSC +V PK +RPNEG+
Sbjct: 16 KAIEEKKRLDGRQTYDYRRIRVSFGADYGCCFVELGETRVMAQVSCELVAPKESRPNEGI 75
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
LF N ELSP+ASP FE GRQ++ SV +NR LE+C + SKCID ESLCVV+ EKVW +RVD
Sbjct: 76 LFFNIELSPLASPAFEAGRQSELSVNLNRQLERCLRNSKCIDTESLCVVSGEKVWQIRVD 135
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+++LN+DGNL+ SIAA+ AL HFR PDV G++I + S E+DPIP++I H P+++S
Sbjct: 136 VHMLNHDGNLMDAASIAAITALCHFRRPDVGIVGEEIKVFSPEERDPIPLSIYHMPISVS 195
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
++ F G+ P E +D L ++ ++ +
Sbjct: 196 FSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHR 229
>gi|449671358|ref|XP_002170387.2| PREDICTED: uncharacterized protein KIAA0930 homolog [Hydra
magnipapillata]
Length = 382
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 165/284 (58%), Gaps = 23/284 (8%)
Query: 39 STTTLEQLLEEINFQRAKEKRQYLRND--MFLTQGTSYWTDLFVRYFLFQTDSNIDC--- 93
+ ++ LLE + + + ND + S W LF YF+ + + D
Sbjct: 2 ANSSKSNLLEALKTHIKSDTADSISNDDSFIVNADESLWPSLFGCYFMGISSEDSDNRNE 61
Query: 94 --------DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYL 144
DD+LF+V+ KY ++ + E++VFRK S+ LP +GDP ++W E+VYL
Sbjct: 62 TAENQQNDDDMLFYVQSKYNQSGN--------EIKVFRKTSKNLPGLGDPHINWMESVYL 113
Query: 145 NMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFT 204
NMI+H +YTLT AICTR L+VL + S KV+AS RRMD+KGE +++YP + F
Sbjct: 114 NMIMHDMEYTLTCAICTRLPTNDLKVLYKTSLKVHASHHMRRMDSKGESSDLSYPNIFFI 173
Query: 205 VDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKF 264
+D+++EVF + + E++CVEL A + VIFLGS+R++AL Y+A+T++ KF
Sbjct: 174 IDSYDEVFESMSIEQEEILCVELSAKYKGTKENIVIFLGSVRHEALLMTYEAKTTIGTKF 233
Query: 265 TQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVE 308
Q+MS+ I S E+++M+GP GKGFAEM + K VE
Sbjct: 234 AQKMSW-INLGGSTDHFEYIRMRGPYGKGFAEMRIGLCKNNLVE 276
>gi|149411987|ref|XP_001513016.1| PREDICTED: exosome complex component RRP45-like [Ornithorhynchus
anatinus]
Length = 439
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/271 (41%), Positives = 161/271 (59%), Gaps = 19/271 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MASP FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVAPKLNRATEGILFFNLELSQMASPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+D ESLCV+A EKVW +RVDL+VLN+DGN+L SIAA+ AL HFR PDV+ GD+I
Sbjct: 113 SKCVDTESLCVIAGEKVWQIRVDLHVLNHDGNILDAASIAAIVALCHFRRPDVSVQGDEI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLD--TALALSQDRQKL 631
+++ E+DP+P++I H P+ +S+A F G+ P E +D +A+++ R+
Sbjct: 173 TLYTPEERDPVPLSIHHMPIYVSFAFFLQGAYLLVDPSEREERVMDGLMVIAMNKHREIC 232
Query: 632 GVDSAYANLVNKTDRIL------------LDEGEKDSGETKVKVEKVGP--GIADLISKS 677
+ S+ ++ K D++L + E + + E KV K G G A+ I
Sbjct: 233 TIQSSGGVMLLK-DQVLRCSKIAGVKVAEITELIQKALENDRKVRKEGGKFGFAESIPNH 291
Query: 678 DIEPSGIKNQWVSSSDDESSAED--DKAETP 706
I +++ V SD E AE+ +AE P
Sbjct: 292 RITVFKMESAAVDMSDVEEKAEEIITEAEPP 322
>gi|449271151|gb|EMC81699.1| Exosome complex exonuclease RRP45, partial [Columba livia]
Length = 389
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 161/264 (60%), Gaps = 24/264 (9%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLAQVSC +V PK RP EG+LF N ELSPMA+P FE GRQ + V +NR +E+C + SK
Sbjct: 2 VLAQVSCELVPPKPNRPAEGILFFNFELSPMAAPGFEPGRQPELLVKVNRLIERCLRNSK 61
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
C+D ESLCVVA EKVW +R+DL++LN+DGN++ SIA + AL HFR PDV+ G+++ +
Sbjct: 62 CVDTESLCVVAGEKVWQIRLDLHLLNHDGNIIDAASIAGIVALCHFRRPDVSVQGEEVTV 121
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQ-KLGVD 634
++ E+DP+P++I H P+ +S+A ++ G+ P E +D L ++ ++ ++
Sbjct: 122 YTPEERDPVPLSIHHMPICVSFAFYHQGTYLLVDPSEREERVMDGLLVIAMNKHGEICTI 181
Query: 635 SAYANLVNKTDRILLDEGEKDSGETKVKVEKVGPGIADLISKS-----DIEPSG------ 683
+ ++ TD++L + S T VKV + I +LI K+ + G
Sbjct: 182 QSSGGIMLVTDQVL-----RCSNITAVKVAE----ITELIQKALENDQKVRKEGGKFGFA 232
Query: 684 --IKNQWVSSSDDESSAED-DKAE 704
I NQ +++ ES+A D DK E
Sbjct: 233 ESIPNQKITAFKMESTAVDTDKVE 256
>gi|327274166|ref|XP_003221849.1| PREDICTED: exosome complex exonuclease RRP45-like [Anolis
carolinensis]
Length = 439
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +L QVSC +V PK R EG+LF N ELSPMASP FE GRQ + V +NR LE+C +
Sbjct: 53 TRILGQVSCELVTPKPNRATEGILFFNLELSPMASPAFEPGRQPELLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL+VLN++GNL+ SIAA+ AL HFR PDV+ G+++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHVLNHNGNLIDAASIAAIVALCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTFLLVDPSEQEERVMDGLLVIAMNKHR 229
>gi|296195656|ref|XP_002745482.1| PREDICTED: exosome complex component RRP45 [Callithrix jacchus]
Length = 440
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVAPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ S+AA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASVAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|449499646|ref|XP_002187964.2| PREDICTED: exosome complex component RRP45 [Taeniopygia guttata]
Length = 395
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 116/151 (76%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQVSC +V PK +RP EG+LF N ELSPMA+P E GRQ++ V +NR LE+C ++
Sbjct: 7 TRVLAQVSCELVPPKPSRPTEGVLFFNLELSPMAAPGLEPGRQSELVVSLNRLLERCLRD 66
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCI+ ESLCVVA EKVW +R+D+++LN+DGN+ SIA + AL HFR PDV+ G+++
Sbjct: 67 SKCIETESLCVVAGEKVWQIRLDMHLLNHDGNITDAASIAGIVALCHFRRPDVSVQGEEV 126
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
+++A E+DP+P++I H P+ +S+A F+ G+
Sbjct: 127 TVYTAEERDPVPLSIHHMPICVSFAFFHQGT 157
>gi|312374015|gb|EFR21670.1| hypothetical protein AND_16645 [Anopheles darlingi]
Length = 371
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 109/139 (78%)
Query: 476 LLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRV 535
+LF+N EL PMA+P F+ GRQ+D SV +NR LE+ K+S C+DLESLC+VAEEKVWN+R+
Sbjct: 1 MLFVNVELGPMAAPHFDGGRQSDESVHLNRILERALKDSGCVDLESLCLVAEEKVWNLRI 60
Query: 536 DLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTI 595
D+ VLN++GN++ CCSIAAL ALAHF+ PD+T G+ +I+H+ EK+PI +T+ HYP+ +
Sbjct: 61 DVTVLNHEGNVIDCCSIAALTALAHFKRPDITVDGENVIVHTLEEKEPIKVTLFHYPICV 120
Query: 596 SYAVFNGGSEGSTVPGFTE 614
SYA+FN G+ P + E
Sbjct: 121 SYAIFNKGTVAVADPSYLE 139
>gi|221128137|ref|XP_002160444.1| PREDICTED: exosome complex component RRP45-like [Hydra
magnipapillata]
Length = 437
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 127/189 (67%), Gaps = 2/189 (1%)
Query: 419 KRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSE--VLAQVSCNMVIPKATRPNEGL 476
K + +D + ++ +IS + G C V+ E VLAQ SC +V P TRP EG
Sbjct: 18 KSIKSGIRLDGRQAFDYRNISIQFGIDYGCCEVQLGETRVLAQTSCELVKPIGTRPTEGQ 77
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L +N +LSPMASP FETGR T + INR +E+C KES+CID+ESLC++A EKVW++RVD
Sbjct: 78 LHLNVDLSPMASPSFETGRMTSQGLEINRLIERCIKESRCIDVESLCLIAGEKVWSIRVD 137
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+ VLN GN+L C IA +A+LAHF+H DVT TG ++IIH+ EKDPIP+ + H P++ +
Sbjct: 138 IVVLNDCGNILDCSCIAGIASLAHFKHHDVTVTGTEVIIHNFKEKDPIPLNVHHMPISTT 197
Query: 597 YAVFNGGSE 605
+ + G +
Sbjct: 198 FGFIDDGEQ 206
>gi|225708190|gb|ACO09941.1| Exosome complex exonuclease RRP45 [Osmerus mordax]
Length = 398
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 133/199 (66%), Gaps = 2/199 (1%)
Query: 434 NWTSISAENGEAVWCPWV--KPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
++ +I G C +V + V+ QVSC +V+PK RP++G++F N ELSPMASP F
Sbjct: 31 DYRTIKISFGTDYGCCFVDLGKTRVMTQVSCELVVPKDNRPSDGIMFFNVELSPMASPGF 90
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
E GRQ++ V +NR LE+C + SKC D ESLCVV+ EKVW +RVD++VLN+DGNL+ S
Sbjct: 91 EVGRQSELLVKLNRQLERCLRNSKCFDTESLCVVSGEKVWQIRVDVHVLNHDGNLMDAAS 150
Query: 552 IAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
+AA+ AL+HFR PDV G+++ ++ + E+DPIP++I H P+ +S++ F G+ P
Sbjct: 151 VAAITALSHFRRPDVGIHGEEVTVYGSEERDPIPLSIYHMPICVSFSFFQQGTYLLVDPC 210
Query: 612 FTECIQLDTALALSQDRQK 630
E +D L ++ ++ +
Sbjct: 211 EREERVMDGLLMIAMNKHR 229
>gi|326918964|ref|XP_003205754.1| PREDICTED: exosome complex exonuclease RRP45-like, partial
[Meleagris gallopavo]
Length = 403
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 145/226 (64%), Gaps = 12/226 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELSPMA+P FE GRQ++ V +NR +E+C +
Sbjct: 16 TRVLGQVSCELVPPKPNRATEGILFCNLELSPMAAPGFEPGRQSELLVKVNRLIERCLRN 75
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIA + AL HFR PDV+ G ++
Sbjct: 76 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAGIVALCHFRRPDVSVQGKEV 135
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTAL--ALSQDRQKL 631
++S E+DP+P++I H P+ +S+A F G+ P E +D L A+++ R+
Sbjct: 136 TVYSPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREIC 195
Query: 632 GVDSAYANLVNKTDRILLDEGEKDSGETKVKVEKVGPGIADLISKS 677
+ S+ ++ K D++L + S T VKV + I +LI K+
Sbjct: 196 TIQSSGGIMLLK-DQVL-----RCSKITAVKVAE----ITELIQKA 231
>gi|77797833|ref|NP_001030000.1| exosome complex exonuclease RRP45 [Gallus gallus]
gi|50593178|gb|AAT79383.1| polymyositis/scleroderma autoantigen 1 [Gallus gallus]
Length = 440
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 145/226 (64%), Gaps = 12/226 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELSPMA+P FE GRQ++ V +NR +E+C +
Sbjct: 53 TRVLGQVSCELVPPKPNRATEGILFCNLELSPMAAPGFEPGRQSELLVKVNRLIERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIA + AL HFR PDV+ G ++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIVDAASIAGIVALCHFRRPDVSVQGKEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTAL--ALSQDRQKL 631
++S E+DP+P++I H P+ +S+A F G+ P E +D L A+++ R+
Sbjct: 173 TVYSPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREIC 232
Query: 632 GVDSAYANLVNKTDRILLDEGEKDSGETKVKVEKVGPGIADLISKS 677
+ S+ ++ K D++L + S T VKV + I +LI K+
Sbjct: 233 TIQSSGGIMLLK-DQVL-----RCSKITAVKVAE----ITELIQKA 268
>gi|351703822|gb|EHB06741.1| Exosome complex exonuclease RRP45 [Heterocephalus glaber]
Length = 462
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 132/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIKISFGTDYGCCIVELGKTRVLGQVSCELVAPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVD+++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDIHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ G+++ +++ E+DP+ ++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAVVALCHFRRPDVSVQGEEVTLYTPEERDPVALSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|432843370|ref|XP_004065602.1| PREDICTED: exosome complex component RRP45-like [Oryzias latipes]
Length = 427
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 141/214 (65%), Gaps = 2/214 (0%)
Query: 419 KRAQDWTDVDFMSSENWTSISAENGEAVWCPWV--KPSEVLAQVSCNMVIPKATRPNEGL 476
K ++ +D + ++ I G C +V + V+AQVSC +V PK +RPNEG+
Sbjct: 16 KAIEEKKRLDGRQTYDYRKIKISFGTDYGCCFVDLGQTRVMAQVSCELVAPKESRPNEGI 75
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
+F N ELSP+ASP FE GRQ++ SV +NR LE+C + SKCID ESLCVV+ EKVW +RVD
Sbjct: 76 MFFNIELSPLASPAFEQGRQSELSVKLNRQLERCLRNSKCIDTESLCVVSGEKVWQIRVD 135
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+++LN DGNL+ SIAA+AAL HFR PDV G+++ ++S E+DPIP++I H P+++S
Sbjct: 136 VHMLNNDGNLMDASSIAAIAALCHFRRPDVAVQGEEVTVYSPEERDPIPLSIYHMPISVS 195
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
++ F G+ P E +D L ++ ++ +
Sbjct: 196 FSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHR 229
>gi|198401795|gb|ACH87550.1| exosome component 9 [Platynereis dumerilii]
Length = 530
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 114/149 (76%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V+AQ SC + PK TRP+EG +F+N ELSPMA+P FE GRQ+D V + R LE+C KES+
Sbjct: 150 VMAQTSCEVTTPKQTRPSEGNVFVNVELSPMAAPHFEAGRQSDAGVELTRILERCIKESR 209
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
C+D ESLC+++ KVW +RVD++VLN++GNL+ SIAA+++L HFR PDV+ +G+ + I
Sbjct: 210 CVDTESLCIMSGVKVWTIRVDVHVLNHNGNLIDAASIAAISSLVHFRRPDVSVSGEDVTI 269
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGGS 604
HS ++DPIP+++ H P+ ++ A ++ G+
Sbjct: 270 HSLEDRDPIPLSVHHMPICVTCAFYHKGT 298
>gi|156383487|ref|XP_001632865.1| predicted protein [Nematostella vectensis]
gi|156219927|gb|EDO40802.1| predicted protein [Nematostella vectensis]
Length = 268
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 115/150 (76%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQVSC + PK R +G ++IN ELSPMASP FE GR ++ V +NRF+E+ + E
Sbjct: 31 TRVLAQVSCEITKPKTNRQTDGHIYINVELSPMASPAFEAGRMSELGVELNRFVERFYIE 90
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ ID ESLC+VA EKVW+VRVD+ VL++ GN+L C I+A+ AL+HFR PDV+ +G+++
Sbjct: 91 SRAIDTESLCIVAGEKVWSVRVDIQVLDHSGNILDCACISAITALSHFRRPDVSVSGEEV 150
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
IHS A++DP+P++ILH P+ +++A F+ G
Sbjct: 151 TIHSEADRDPVPLSILHMPICVTFAFFDNG 180
>gi|402585680|gb|EJW79619.1| hypothetical protein WUBG_09472, partial [Wuchereria bancrofti]
Length = 241
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 134/191 (70%), Gaps = 11/191 (5%)
Query: 75 WTDLFVRYFLFQTDSNI-DC----DDLLFFVRKKYIKTSSRNLP--KFETEVEVFRKDSR 127
W LF + N +C DD+L++V ++ SR+ + + +++V+R+ S
Sbjct: 54 WCKLFADFIAGNAYCNAKNCASHSDDMLWYVS---VQQVSRDFCVGQEDGQLQVYRRQSP 110
Query: 128 KLPI-GDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
P+ DP ++WEETV LN+I+ Q D+ +T A+C +TSP++LQ+L+R+ Q+VY SPS+RR
Sbjct: 111 NKPVLNDPSINWEETVCLNLILQQLDFQITCAVCIKTSPQNLQILRRNCQRVYPSPSKRR 170
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE EE+TYP + F +D+F ++F D++VRDGE VCVELVA DR + ++VIFLGSIR
Sbjct: 171 MDSKGECEEITYPKIYFAIDDFEQIFSDVVVRDGECVCVELVAKDRCKNCEAVIFLGSIR 230
Query: 247 YDALKRVYDAR 257
Y+ LK+ YDAR
Sbjct: 231 YEVLKQAYDAR 241
>gi|221221406|gb|ACM09364.1| Exosome complex exonuclease RRP45 [Salmo salar]
Length = 231
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 129/188 (68%), Gaps = 2/188 (1%)
Query: 419 KRAQDWTDVDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGL 476
K ++ +D + ++ SI G C +V + ++AQVSC ++ PK RPNEG+
Sbjct: 16 KAIEEKKRLDGRQTYDYRSIKISFGTDYGCCFVDLGKTRIMAQVSCELITPKENRPNEGI 75
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
+F N ELSPMASP FE GRQ++ V +NR LE+C + SKCID ESLCVV+ EKVW +RVD
Sbjct: 76 MFFNIELSPMASPAFEMGRQSELLVKLNRQLERCLRNSKCIDTESLCVVSGEKVWQIRVD 135
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+ +LN+DGNL+ SIAA+AAL HFR PDV G+++ ++S E+DPIP++I H P+ +S
Sbjct: 136 VRLLNHDGNLMDAASIAAIAALCHFRRPDVGIQGEEVTVYSTEERDPIPLSIYHMPICVS 195
Query: 597 YAVFNGGS 604
++ F G+
Sbjct: 196 FSFFQQGT 203
>gi|444519035|gb|ELV12525.1| hypothetical protein TREES_T100014460 [Tupaia chinensis]
Length = 462
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 162/293 (55%), Gaps = 70/293 (23%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS--------RNLPKFETEVEVFRKD 125
+WT +F YF+ + D D+LF+VR+K T + + E EVEV+R+
Sbjct: 31 FWTWMFSTYFMEKCAPRQD--DMLFYVRRKLAFTGGESSVDGRKQAEAEPEVEVEVYRRA 88
Query: 126 SRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTL---------------------AICTRT 163
S+KLP +GDPD+DWEE+V LN+I+ + DY +T A C
Sbjct: 89 SKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRTESGDIHIHKKKSQLRAPCPGN 148
Query: 164 SPKH------LQVLKR-------HS----------------------QKVYASPSRRRMD 188
SP+ LQ R H Q+V+ASPS+ MD
Sbjct: 149 SPEPGPPKGPLQRAPRLRASSEQHGCAGLALLCKARGLTQAFTSAPFQQVFASPSKHPMD 208
Query: 189 TKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYD 248
+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + VIF GSIRY+
Sbjct: 209 SKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNMFQGVIFQGSIRYE 268
Query: 249 ALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 269 ALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 318
>gi|291229746|ref|XP_002734834.1| PREDICTED: exosome component 9-like [Saccoglossus kowalevskii]
Length = 421
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 125/177 (70%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC ++ P+ RP EG L+ N ELSPMASP FE GRQ++ + I RFLEK ++
Sbjct: 83 TRVLCQVSCEIIEPRQNRPTEGGLYFNVELSPMASPLFEPGRQSEFGIEIIRFLEKTVRD 142
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ ID ESLC+VA EKVW +R+D++VLN+DGN++ C ++AA+ AL+HFR PDV+ G+ +
Sbjct: 143 SRAIDTESLCIVAGEKVWEIRIDIHVLNHDGNIMDCVTMAAVTALSHFRRPDVSVVGEDV 202
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+HSAA++DP+ +++ H PV++++A F+ G P E +D ++ LS + +
Sbjct: 203 QVHSAADRDPVSLSVHHLPVSVTFAYFDEGKYLLVDPTEREECVMDGSMILSMNIHR 259
>gi|351710102|gb|EHB13021.1| Exosome complex exonuclease RRP45 [Heterocephalus glaber]
Length = 364
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 179/334 (53%), Gaps = 32/334 (9%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIKISFGTDYGCCIVELGKTRVLGQVSCELVAPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + KC D ESLC VA EKVW +RVD+++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNLKCTDTESLCAVAGEKVWQIRVDIHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N+ SI A+ A HFR PDV+ G ++ +++ E DP+ ++I H P+ +S+A F G+
Sbjct: 144 NITDAASIDAIVASCHFRRPDVSVQG-EVTLYTPEEHDPVALSIHHMPICVSFAFFQQGT 202
Query: 605 EGSTVPGFTECIQLDTALALSQDRQKLGVDSAYANLVNKTDRILLDEGEKDSGETKVKVE 664
P E +D L ++ ++ + Y+ + +L D+ + S T VKV
Sbjct: 203 YLLVDPNEREECVMDGLLVIAMNKHREICTIQYSGGI----MLLKDQVLRCSKITGVKVA 258
Query: 665 KVGPGIADLISKSDIEPSGIKNQWVSSSDDESSAEDDKAETPRVQSVEDEG--DEVMLVD 722
++ I + + G++N W D E S +D EDEG DE +++D
Sbjct: 259 EITELIQKTLENNQKIREGVENSW---GDLEDSEKD-----------EDEGGSDEAVILD 304
Query: 723 SVNPRTKVR--------EEVVLSGDSEEEDTVML 748
++ T + +VLS DSEEE+ ++L
Sbjct: 305 NIKMDTGAEASDIGSQDDPIVLS-DSEEEEMIIL 337
>gi|335293904|ref|XP_003129265.2| PREDICTED: exosome complex component RRP45-like [Sus scrofa]
Length = 440
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/271 (40%), Positives = 162/271 (59%), Gaps = 19/271 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTAL--ALSQDRQKL 631
+++ E+DP+P++I H P+ +S+A F G+ P E +D L A+++ R+
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREIC 232
Query: 632 GVDSAYANLVNKTDRIL------------LDEGEKDSGETKVKVEKVGP--GIADLISKS 677
+ S+ ++ K D++L + E + + E KV K G G A+ I+
Sbjct: 233 TIQSSGGIMLLK-DQVLRCSKIAGVKVLEITELIQKALENDQKVRKEGGKFGFAESIANQ 291
Query: 678 DIEPSGIKNQWVSSSDDESSAED--DKAETP 706
I ++ + +SD E AE+ +AE P
Sbjct: 292 RITAFKMEKAPIDTSDVEEKAEEIISEAEPP 322
>gi|444721920|gb|ELW62627.1| Exosome complex component RRP45 [Tupaia chinensis]
Length = 438
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 159/268 (59%), Gaps = 17/268 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTAL--ALSQDRQKL 631
+++ E+DP+P++I H P+ +S+A F G+ P E +D L A+++ R+
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREIC 232
Query: 632 GVDSAYANLVNKTDRIL------------LDEGEKDSGETKVKVEKVGP--GIADLISKS 677
+ S+ ++ K D++L + E + + E KV K G G A+ I+
Sbjct: 233 TIQSSGGIMLLK-DQVLRCSKIAGVKVAEITELIQKALENDQKVRKEGGKFGFAESIANQ 291
Query: 678 DIEPSGIKNQWVSSSDDESSAEDDKAET 705
I ++ + +SD E AE AE
Sbjct: 292 RITAFKMEKAPIDTSDVEEKAEGIIAEA 319
>gi|427795691|gb|JAA63297.1| Putative exosome component 9, partial [Rhipicephalus pulchellus]
Length = 514
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 108/150 (72%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+AQVS +++PK RP EG LF+N ELSPMA+P FE GR D V + R LE+C ++
Sbjct: 99 TKVMAQVSAEIIVPKPGRPTEGELFVNLELSPMAAPHFEAGRLGDYGVEVARLLERCIRD 158
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+CIDLESLCVV+ EKVW +RVD VLN+ GN++ C IA + AL HFR PDVT G ++
Sbjct: 159 SQCIDLESLCVVSGEKVWALRVDAQVLNHQGNIVECAGIATIGALMHFRRPDVTVIGTEV 218
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+H+ +++P+P+ + HYP + +A ++ G
Sbjct: 219 TVHNPRDREPVPLHLHHYPFLVCFAFYDDG 248
>gi|321478855|gb|EFX89812.1| hypothetical protein DAPPUDRAFT_40604 [Daphnia pulex]
Length = 279
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 117/150 (78%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+AQVSC++ +PK++R NEG+LFIN E+S MA+ FE GR + +NR +E+C K+
Sbjct: 53 TRVMAQVSCSVQVPKSSRANEGMLFINVEMSTMAAEHFEAGRLGQQGIEVNRLVERCIKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+CIDLESLC++ EE+ W VRVD+++LN++GNL+ ++AAL AL HF+ PDVT G +
Sbjct: 113 SRCIDLESLCILVEEQAWEVRVDIHILNHEGNLIDAATLAALGALCHFKRPDVTLDGRDV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
IIH E+DP+P+TILH+P+T+S+A+FN G
Sbjct: 173 IIHQLDERDPVPLTILHHPLTLSFALFNQG 202
>gi|395545185|ref|XP_003774485.1| PREDICTED: exosome complex component RRP45 isoform 2 [Sarcophilus
harrisii]
Length = 453
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIKISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD+I +++ E+DP+P++I H P+ IS+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEITLYALEERDPVPLSIHHMPICISFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|395545183|ref|XP_003774484.1| PREDICTED: exosome complex component RRP45 isoform 1 [Sarcophilus
harrisii]
Length = 439
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIKISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD+I +++ E+DP+P++I H P+ IS+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEITLYALEERDPVPLSIHHMPICISFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|427795753|gb|JAA63328.1| Putative exosome component 9, partial [Rhipicephalus pulchellus]
Length = 477
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 108/150 (72%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+AQVS +++PK RP EG LF+N ELSPMA+P FE GR D V + R LE+C ++
Sbjct: 99 TKVMAQVSAEIIVPKPGRPTEGELFVNLELSPMAAPHFEAGRLGDYGVEVARLLERCIRD 158
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+CIDLESLCVV+ EKVW +RVD VLN+ GN++ C IA + AL HFR PDVT G ++
Sbjct: 159 SQCIDLESLCVVSGEKVWALRVDAQVLNHQGNIVECAGIATIGALMHFRRPDVTVIGTEV 218
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+H+ +++P+P+ + HYP + +A ++ G
Sbjct: 219 TVHNPRDREPVPLHLHHYPFLVCFAFYDDG 248
>gi|332244452|ref|XP_003271388.1| PREDICTED: exosome complex component RRP45 isoform 2 [Nomascus
leucogenys]
Length = 456
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ +L HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVSLCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|126330624|ref|XP_001362799.1| PREDICTED: exosome complex component RRP45-like isoform 1
[Monodelphis domestica]
Length = 438
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD+I
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ IS+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYALEERDPVPLSIHHMPICISFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|440908962|gb|ELR58930.1| Exosome complex exonuclease RRP45 [Bos grunniens mutus]
Length = 446
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 162/271 (59%), Gaps = 19/271 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTAL--ALSQDRQKL 631
+++ E+DP+P++I H P+ +S+A F G+ P E +D L A+++ R+
Sbjct: 173 TLYTLEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPSEREERVMDGLLVIAMNKHREIC 232
Query: 632 GVDSAYANLVNKTDRIL------------LDEGEKDSGETKVKVEKVGP--GIADLISKS 677
+ S+ ++ K D++L + E + + E KV K G G A+ ++
Sbjct: 233 TIQSSGGIMLLK-DQVLRCSKIAGVKVVEITELIQKALENDQKVRKEGGKFGFAESMANQ 291
Query: 678 DIEPSGIKNQWVSSSDDESSAED--DKAETP 706
I ++ + +SD E AE+ +AE P
Sbjct: 292 RITAFKMEKAPIDTSDVEEKAEEIISEAEPP 322
>gi|332244450|ref|XP_003271387.1| PREDICTED: exosome complex component RRP45 isoform 1 [Nomascus
leucogenys]
Length = 439
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ +L HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVSLCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|296486842|tpg|DAA28955.1| TPA: exosome complex exonuclease RRP45 [Bos taurus]
Length = 440
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 162/271 (59%), Gaps = 19/271 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTAL--ALSQDRQKL 631
+++ E+DP+P++I H P+ +S+A F G+ P E +D L A+++ R+
Sbjct: 173 TLYTLEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPSEREERVMDGLLVIAMNKHREIC 232
Query: 632 GVDSAYANLVNKTDRIL------------LDEGEKDSGETKVKVEKVGP--GIADLISKS 677
+ S+ ++ K D++L + E + + E KV K G G A+ ++
Sbjct: 233 TIQSSGGIMLLK-DQVLRCSKIAGVKVVEITELIQKALENDQKVRKEGGKFGFAESMANQ 291
Query: 678 DIEPSGIKNQWVSSSDDESSAED--DKAETP 706
I ++ + +SD E AE+ +AE P
Sbjct: 292 RITAFKMEKAPIDTSDVEEKAEEIISEAEPP 322
>gi|149698257|ref|XP_001503169.1| PREDICTED: exosome complex component RRP45-like [Equus caballus]
Length = 440
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L L+ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVLAMNKHR 229
>gi|426231206|ref|XP_004009631.1| PREDICTED: exosome complex component RRP45 [Ovis aries]
Length = 440
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 162/271 (59%), Gaps = 19/271 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTAL--ALSQDRQKL 631
+++ E+DP+P++I H P+ +S+A F G+ P E +D L A+++ R+
Sbjct: 173 TLYTLEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPSEREERVMDGLLVIAMNKHREIC 232
Query: 632 GVDSAYANLVNKTDRIL------------LDEGEKDSGETKVKVEKVGP--GIADLISKS 677
+ S+ ++ K D++L + E + + E KV K G G A+ ++
Sbjct: 233 TIQSSGGIMLLK-DQVLRCSKIAGVKVVEITELIQKALENDQKVRKEGGKFGFAESMANQ 291
Query: 678 DIEPSGIKNQWVSSSDDESSAED--DKAETP 706
I ++ + +SD E AE+ +AE P
Sbjct: 292 RITAFKMEKAPIDTSDVEEKAEEIISEAEPP 322
>gi|395845692|ref|XP_003795559.1| PREDICTED: exosome complex component RRP45 [Otolemur garnettii]
Length = 439
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIKISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL+HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALSHFRRPDVSVQGDEVTLYTHEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|432097876|gb|ELK27905.1| Exosome complex component RRP45 [Myotis davidii]
Length = 423
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 167/291 (57%), Gaps = 17/291 (5%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ SI G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 7 LDGRQTYDYRSIRISFGADYGCCVVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 66
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 67 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 126
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 127 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 186
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK-LGVDSAYANLVNKTDRIL------------LDE 651
P E +D L ++ ++ + + + ++ +++L + E
Sbjct: 187 FLLVDPSEREERVMDGLLVIAVNKHREICTIQSSGGIMLLNEQVLRCSKIAGVKVAEITE 246
Query: 652 GEKDSGETKVKVEKVGP--GIADLISKSDIEPSGIKNQWVSSSDDESSAED 700
+ + E KV K G G A+ I+K I ++ V +SD E AE+
Sbjct: 247 LIQKALENDQKVRKEGGKFGFAESIAKQRITAFRMEKAPVDTSDVEEKAEE 297
>gi|297674268|ref|XP_002815154.1| PREDICTED: exosome complex component RRP45 isoform 3 [Pongo abelii]
gi|297674270|ref|XP_002815155.1| PREDICTED: exosome complex component RRP45 isoform 4 [Pongo abelii]
Length = 456
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREECVMDGLLVIAMNKHR 229
>gi|332244454|ref|XP_003271389.1| PREDICTED: exosome complex component RRP45 isoform 3 [Nomascus
leucogenys]
Length = 392
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ +L HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVSLCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|297674264|ref|XP_002815152.1| PREDICTED: exosome complex component RRP45 isoform 1 [Pongo abelii]
gi|297674266|ref|XP_002815153.1| PREDICTED: exosome complex component RRP45 isoform 2 [Pongo abelii]
Length = 439
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREECVMDGLLVIAMNKHR 229
>gi|297674272|ref|XP_002815156.1| PREDICTED: exosome complex component RRP45 isoform 5 [Pongo abelii]
Length = 392
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREECVMDGLLVIAMNKHR 229
>gi|403290342|ref|XP_003936279.1| PREDICTED: exosome complex component RRP45 [Saimiri boliviensis
boliviensis]
Length = 440
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVAPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|417400960|gb|JAA47389.1| Putative exosomal 3'-5' exoribonuclease complex subunit rrp45
[Desmodus rotundus]
Length = 440
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ SI G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRSIKISFGTDYGCCVVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MASP FE GRQ+D V +NR LE+C + SKCID ESLCV+A EKVW +RVDL++LN+DG
Sbjct: 84 QMASPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVIAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P+++ H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSVHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 FLLVDPSEREERVMDGLLVIAMNKHR 229
>gi|256084132|ref|XP_002578286.1| hypothetical protein [Schistosoma mansoni]
Length = 621
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 167/300 (55%), Gaps = 29/300 (9%)
Query: 27 IVNIGEDESILKSTTTLEQLLEEINFQRAKEKRQYLRNDM---FLTQGTSYWTDLFVRYF 83
+VN G + TL ++E I QR + F+ ++W +LF + F
Sbjct: 12 LVNTGCLNNTPVGNITLNYIMESIIRQRQLCTENIPKKSFDVTFINSHNNFWFNLFTQAF 71
Query: 84 LFQT-DSNIDC--DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWE 139
L ++++D DDLLFFV +K R + E+ VFR++S LP + D VDWE
Sbjct: 72 LSPALENSVDGPGDDLLFFVH--LLKQKDR-----KPELSVFRRNSSNLPKLTDDYVDWE 124
Query: 140 ETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYP 199
ETVYLN+++ F Y +T+A+CTRT P+ Q+LK+ SQ VYASPS R+M+ KG EE+ YP
Sbjct: 125 ETVYLNLLMQYFVYVVTVAVCTRTGPQEWQILKKFSQTVYASPSHRQMNMKGSYEEIVYP 184
Query: 200 CVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTS 259
+ FT+DN+ E F + ++RD E + VEL A DR G V V FLG++ YD +K+ YD +
Sbjct: 185 DLYFTIDNYEEAFGECVLRDSECINVELTAYDRHGRVHGVCFLGTVSYDTIKQFYDRSSQ 244
Query: 260 V----------SNKFTQRMSFGIFSNNSNSRIE-----FVKMKGPQGKGFAEMAVTKPKG 304
S RMS +S++S I+ F+++ GPQ KG AE+A+ K
Sbjct: 245 ACSTGNLVNHRSGYRDNRMSNSYYSSSSPPNIDYTSTRFMRVIGPQAKGSAEIAIKSMKN 304
>gi|355687576|gb|EHH26160.1| hypothetical protein EGK_16059 [Macaca mulatta]
gi|355749543|gb|EHH53942.1| hypothetical protein EGM_14660 [Macaca fascicularis]
Length = 456
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|410956922|ref|XP_003985085.1| PREDICTED: exosome complex component RRP45 [Felis catus]
Length = 445
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|114595906|ref|XP_001154031.1| PREDICTED: exosome complex component RRP45 isoform 4 [Pan
troglodytes]
Length = 456
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|402870361|ref|XP_003899195.1| PREDICTED: exosome complex component RRP45 isoform 2 [Papio anubis]
Length = 456
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|147898885|ref|NP_001085439.1| exosome component 9 [Xenopus laevis]
gi|49114791|gb|AAH72749.1| SCL75 protein [Xenopus laevis]
Length = 431
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 113/150 (75%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK +RP EG+LF N E+SPMA P FE GRQ++ SV +NR LE+C +
Sbjct: 53 TRVLCQVSCEIVTPKMSRPTEGILFFNLEISPMAFPGFEMGRQSELSVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCV A EKVW +RVDL++LN++GN++ SIAA+A L HFR PDV+ G+++
Sbjct: 113 SKCIDTESLCVAAGEKVWQIRVDLHLLNHEGNIIDAASIAAIAGLCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+++ E+DP+P++I H P+ +S+A F G
Sbjct: 173 TVYTPEERDPVPLSIHHMPICVSFAFFQQG 202
>gi|114595908|ref|XP_001154164.1| PREDICTED: exosome complex component RRP45 isoform 6 [Pan
troglodytes]
gi|410265114|gb|JAA20523.1| exosome component 9 [Pan troglodytes]
gi|410292732|gb|JAA24966.1| exosome component 9 [Pan troglodytes]
Length = 439
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|402870359|ref|XP_003899194.1| PREDICTED: exosome complex component RRP45 isoform 1 [Papio anubis]
gi|380813850|gb|AFE78799.1| exosome complex component RRP45 isoform 2 [Macaca mulatta]
Length = 439
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|71724847|gb|AAZ38885.1| 3' exoribonuclease [Xenopus laevis]
Length = 431
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 113/150 (75%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK +RP EG+LF N E+SPMA P FE GRQ++ SV +NR LE+C +
Sbjct: 53 TRVLCQVSCEIVTPKMSRPTEGILFFNLEISPMAFPGFEMGRQSELSVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCV A EKVW +RVDL++LN++GN++ SIAA+A L HFR PDV+ G+++
Sbjct: 113 SKCIDTESLCVAAGEKVWQIRVDLHLLNHEGNIIDAASIAAIAGLCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+++ E+DP+P++I H P+ +S+A F G
Sbjct: 173 TVYTPEERDPVPLSIHHMPICVSFAFFQQG 202
>gi|332820219|ref|XP_001154217.2| PREDICTED: exosome complex component RRP45 isoform 7 [Pan
troglodytes]
Length = 392
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|402870363|ref|XP_003899196.1| PREDICTED: exosome complex component RRP45 isoform 3 [Papio anubis]
Length = 392
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|344277527|ref|XP_003410552.1| PREDICTED: exosome complex component RRP45 [Loxodonta africana]
Length = 439
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|78045505|ref|NP_001030225.1| exosome complex component RRP45 [Bos taurus]
gi|122140086|sp|Q3SWZ4.1|EXOS9_BOVIN RecName: Full=Exosome complex component RRP45; AltName:
Full=Exosome component 9
gi|74356309|gb|AAI04588.1| Exosome component 9 [Bos taurus]
Length = 440
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTLEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPSEREERVMDGLLVIAMNKHR 229
>gi|281343292|gb|EFB18876.1| hypothetical protein PANDA_013099 [Ailuropoda melanoleuca]
Length = 456
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|73983962|ref|XP_533302.2| PREDICTED: exosome complex component RRP45 isoform 1 [Canis lupus
familiaris]
Length = 440
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|297293310|ref|XP_001101063.2| PREDICTED: exosome complex exonuclease RRP45 [Macaca mulatta]
Length = 432
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|56754130|gb|AAW25254.1| SJCHGC06789 protein [Schistosoma japonicum]
Length = 378
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 167/296 (56%), Gaps = 29/296 (9%)
Query: 28 VNIGEDESILKSTTTLEQLLEEINFQRAKEKRQYLRNDM---FLTQGTSYWTDLFVRYFL 84
VN G +I TL +L+ I QR L++ + +W LF + FL
Sbjct: 13 VNTGISNNIPPGNITLHSILKMIIRQRGLYTENILKDGFDGAVINSHNDFWFGLFTQAFL 72
Query: 85 FQT-DSNIDC--DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWEE 140
+S++D DDLLF+V ++K ++ + E+ VFR++S LP + D +DWEE
Sbjct: 73 SPALESSVDGPGDDLLFYVH--HLKQNNE-----KPELSVFRRNSSNLPKLTDDYIDWEE 125
Query: 141 TVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPC 200
TVYLN+++ F Y +T+A+CTRT P+ Q+LK+ S VY+SPS R+M+ KG E++ YP
Sbjct: 126 TVYLNLLMQYFVYVVTIAVCTRTGPQEWQILKKFSHTVYSSPSHRQMNVKGSYEQIAYPD 185
Query: 201 VCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDART-- 258
+ FT+DN+ E F + ++RD E + +EL A +R+G V V FLG+I Y +K+ YD +
Sbjct: 186 LYFTIDNYEEAFAECVLRDSECLNIELTAYNRSGQVHGVCFLGTISYSTIKQFYDHLSHA 245
Query: 259 --------SVSNKFTQRMSFGIFSNNS----NSRIEFVKMKGPQGKGFAEMAVTKP 302
++S RM+ +S+ S + +F+++ GPQ G E+A+ KP
Sbjct: 246 SRSNYHPITLSRHRNNRMTNSSYSSTSPILDYTSTQFMRVIGPQANGLVEIAI-KP 300
>gi|431899671|gb|ELK07625.1| Exosome complex exonuclease RRP45 [Pteropus alecto]
Length = 440
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|354496605|ref|XP_003510416.1| PREDICTED: exosome complex component RRP45-like [Cricetulus
griseus]
Length = 437
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ G+++ +++ E+DP+P++I H P+ IS+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEERDPVPLSIHHMPICISFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|301776905|ref|XP_002923870.1| PREDICTED: exosome complex exonuclease RRP45-like [Ailuropoda
melanoleuca]
Length = 440
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|122920907|pdb|2NN6|A Chain A, Structure Of The Human Rna Exosome Composed Of Rrp41,
Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
Length = 358
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 41 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 100
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR +E+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 101 QMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 160
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 161 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 220
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 221 YLLVDPNEREERVMDGLLVIAMNKHR 246
>gi|387015828|gb|AFJ50033.1| Exosome complex exonuclease RRP45-like [Crotalus adamanteus]
Length = 434
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 123/177 (69%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELSPMASP FE GRQ++ V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKPNRATEGILFFNLELSPMASPAFEPGRQSELLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+D ESLCVVA EKVW +RVDL++LN++GN++ SIAA+ AL HFR PDV+ G+++
Sbjct: 113 SKCVDTESLCVVAGEKVWQIRVDLHLLNHNGNIIDAASIAAIVALCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPSEQEERVMDGLLVIAMNKHR 229
>gi|146218577|gb|AAI40040.1| Exosome component 9 [synthetic construct]
gi|146218579|gb|AAI40039.1| Exosome component 9 [synthetic construct]
gi|148745755|gb|AAI42979.1| Exosome component 9 [Homo sapiens]
Length = 439
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR +E+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGAYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|77812670|ref|NP_005024.2| exosome complex component RRP45 isoform 2 [Homo sapiens]
gi|147744559|sp|Q06265.3|EXOS9_HUMAN RecName: Full=Exosome complex component RRP45; AltName:
Full=Autoantigen PM/Scl 1; AltName: Full=Exosome
component 9; AltName: Full=P75 polymyositis-scleroderma
overlap syndrome-associated autoantigen; AltName:
Full=Polymyositis/scleroderma autoantigen 1; AltName:
Full=Polymyositis/scleroderma autoantigen 75 kDa;
Short=PM/Scl-75
gi|28172864|emb|CAD44530.1| polymyositis/scleroderma autoantigen 1 [Homo sapiens]
gi|119625653|gb|EAX05248.1| exosome component 9, isoform CRA_b [Homo sapiens]
Length = 439
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR +E+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|77812672|ref|NP_001029366.1| exosome complex component RRP45 isoform 1 [Homo sapiens]
gi|28172868|emb|CAD56889.1| polymyositis/scleroderma autoantigen 1 [Homo sapiens]
gi|119625652|gb|EAX05247.1| exosome component 9, isoform CRA_a [Homo sapiens]
Length = 456
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR +E+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|194378034|dbj|BAG63380.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR +E+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|355686813|gb|AER98195.1| exosome component 9 [Mustela putorius furo]
Length = 394
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIKISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|242003305|ref|XP_002422688.1| Exosome complex exonuclease RRP45, putative [Pediculus humanus
corporis]
gi|212505510|gb|EEB09950.1| Exosome complex exonuclease RRP45, putative [Pediculus humanus
corporis]
Length = 349
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 130/185 (70%), Gaps = 9/185 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ ++ + + D+ ++W GE S+V++QV C + P+A RPNEGL
Sbjct: 25 DGRKLEGFRDLKIHFGKDWGLCYVSLGE---------SKVVSQVKCEIQEPQAVRPNEGL 75
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
F+N ELS MASP E GR ++ S I R L+KC +SK IDLESLC+VAE+KVW +++D
Sbjct: 76 FFMNVELSLMASPYIEPGRASNLSTHIQRLLDKCLYDSKAIDLESLCIVAEDKVWAIKID 135
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
++VLN+DG+L+ C SI+ALAALAHF+ PDVT+ G++I +HS AE+DPIP+T+ HYP+ +S
Sbjct: 136 VHVLNHDGSLVDCASISALAALAHFKRPDVTTDGEEIKVHSTAERDPIPLTLHHYPICVS 195
Query: 597 YAVFN 601
+A+ N
Sbjct: 196 FALLN 200
>gi|344245223|gb|EGW01327.1| Exosome complex exonuclease RRP45 [Cricetulus griseus]
Length = 386
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ G+++ +++ E+DP+P++I H P+ IS+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEERDPVPLSIHHMPICISFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|70794772|ref|NP_001020577.1| exosome complex component RRP45 [Rattus norvegicus]
gi|81918190|sp|Q4QR75.1|EXOS9_RAT RecName: Full=Exosome complex component RRP45; AltName:
Full=Exosome component 9
gi|67678411|gb|AAH97413.1| Exosome component 9 [Rattus norvegicus]
gi|149048739|gb|EDM01280.1| exosome component 9, isoform CRA_b [Rattus norvegicus]
gi|149048740|gb|EDM01281.1| exosome component 9, isoform CRA_b [Rattus norvegicus]
Length = 437
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ G+++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|241608403|ref|XP_002405972.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp43, putative
[Ixodes scapularis]
gi|215500728|gb|EEC10222.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp43, putative
[Ixodes scapularis]
Length = 425
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 114/156 (73%), Gaps = 3/156 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLAQVS +++PK RPNEG LF+N ELSPMA+P FE GR D V I R LE+C ++
Sbjct: 54 TKVLAQVSSEVIVPKPNRPNEGELFVNLELSPMAAPHFEAGRLGDFGVEIARLLERCVRD 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S C+DLESLC+VA EKVW++RVD+ VLN+ GN+ C S+A +AAL HFR PDVT G ++
Sbjct: 114 SHCVDLESLCIVAREKVWSLRVDVQVLNHRGNIAECASVATVAALLHFRRPDVTVVGTEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
+H E++P+P+ + HYP +S+A ++ EG TV
Sbjct: 174 TVHDPREREPVPLHLHHYPYLMSFAFYD---EGKTV 206
>gi|54400656|ref|NP_001006077.1| exosome complex exonuclease RRP45 [Danio rerio]
gi|53734430|gb|AAH83243.1| Exosome component 9 [Danio rerio]
gi|182889156|gb|AAI64713.1| Exosc9 protein [Danio rerio]
Length = 393
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 127/191 (66%), Gaps = 8/191 (4%)
Query: 416 KESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPN 473
KE KR +D + ++ +I G C V+ + VL+QVSC +V PK +RP
Sbjct: 19 KEKKR------LDGRQTYDYRNIKISFGTDYGCCVVELGKTRVLSQVSCELVPPKDSRPT 72
Query: 474 EGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNV 533
EG++F N ELSPMASP FE RQ++ V +NR LE+C + SKCID ESLCVV+ EKVW +
Sbjct: 73 EGIVFFNLELSPMASPAFEPNRQSELLVTLNRQLERCLRNSKCIDTESLCVVSGEKVWQI 132
Query: 534 RVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPV 593
RVD++VLN+DGNL+ SIAA++AL+HFR PDV G + + E+DPIP++I H P+
Sbjct: 133 RVDVHVLNHDGNLMDAASIAAISALSHFRRPDVAIQGRDVTVFGPEERDPIPLSIYHMPI 192
Query: 594 TISYAVFNGGS 604
+S+A F GS
Sbjct: 193 CVSFAFFLQGS 203
>gi|119625656|gb|EAX05251.1| exosome component 9, isoform CRA_e [Homo sapiens]
Length = 242
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR +E+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|119625657|gb|EAX05252.1| exosome component 9, isoform CRA_f [Homo sapiens]
Length = 423
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR +E+C +
Sbjct: 37 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRN 96
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 97 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 156
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 157 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 213
>gi|397490985|ref|XP_003816461.1| PREDICTED: exosome complex component RRP45 isoform 1 [Pan paniscus]
Length = 439
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++ N+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLFNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|397490987|ref|XP_003816462.1| PREDICTED: exosome complex component RRP45 isoform 2 [Pan paniscus]
Length = 456
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++ N+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLFNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|397490989|ref|XP_003816463.1| PREDICTED: exosome complex component RRP45 isoform 3 [Pan paniscus]
Length = 392
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 132/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++ N+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLFNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|187957240|gb|AAI58076.1| Exosc9 protein [Mus musculus]
Length = 438
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ G+++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|9506981|ref|NP_062266.1| exosome complex component RRP45 [Mus musculus]
gi|14285679|sp|Q9JHI7.1|EXOS9_MOUSE RecName: Full=Exosome complex component RRP45; AltName:
Full=Autoantigen PM/Scl 1; AltName: Full=Exosome
component 9; AltName: Full=P75 polymyositis-scleroderma
overlap syndrome-associated autoantigen; AltName:
Full=Polymyositis/scleroderma autoantigen 1; AltName:
Full=Polymyositis/scleroderma autoantigen 75 kDa;
Short=PM/Scl-75
gi|8132103|gb|AAF73218.1|AF152841_1 polymyositis scleroderma overlap syndrome (PM-SCL) antigen 1 a [Mus
musculus]
gi|8132105|gb|AAF73219.1|AF152842_1 polymyositis scleroderma overlap syndrome (PM-SCL) antigen 1 b [Mus
musculus]
gi|13542847|gb|AAH05622.1| Exosome component 9 [Mus musculus]
gi|30354433|gb|AAH52156.1| Exosome component 9 [Mus musculus]
Length = 438
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ G+++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|148703131|gb|EDL35078.1| exosome component 9, isoform CRA_a [Mus musculus]
gi|148703133|gb|EDL35080.1| exosome component 9, isoform CRA_a [Mus musculus]
Length = 437
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ G+++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|426345379|ref|XP_004040392.1| PREDICTED: exosome complex component RRP45 isoform 1 [Gorilla
gorilla gorilla]
Length = 439
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GR +D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRHSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|426345381|ref|XP_004040393.1| PREDICTED: exosome complex component RRP45 isoform 2 [Gorilla
gorilla gorilla]
Length = 456
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GR +D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRHSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|426345383|ref|XP_004040394.1| PREDICTED: exosome complex component RRP45 isoform 3 [Gorilla
gorilla gorilla]
Length = 392
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 132/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GR +D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRHSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|12847890|dbj|BAB27749.1| unnamed protein product [Mus musculus]
Length = 395
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV+ G+++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|291401826|ref|XP_002717277.1| PREDICTED: exosome component 9 [Oryctolagus cuniculus]
Length = 440
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 111/150 (74%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR LE+C +
Sbjct: 53 TRVLGQVSCELVAPKLNRATEGILFCNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+D ESLCVVA EKVW +RVDL++LN+DGN++ SIAA+ AL HFR PDV+ GD++
Sbjct: 113 SKCMDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+++ E+DP+P++I H P+ +S+A F G
Sbjct: 173 TLYTPEERDPVPLSIHHMPICVSFAFFQQG 202
>gi|410932317|ref|XP_003979540.1| PREDICTED: exosome complex component RRP45-like [Takifugu rubripes]
Length = 312
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 110/151 (72%), Gaps = 2/151 (1%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVKPSE--VLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ I G C +V+ E V+AQVSC +V PK +RPNEG+LF N ELS
Sbjct: 24 LDGRQTYDYRRIKVSFGADYGCCFVELGETRVMAQVSCELVAPKESRPNEGILFFNIELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
PMASP FE GRQ++ SV +NR LE+C + SKCID ESLCVV+ EKVW +RVD+++LN+DG
Sbjct: 84 PMASPAFEAGRQSELSVKLNRQLERCLRNSKCIDTESLCVVSGEKVWQIRVDVHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
NL+ SIAA+ AL+HFR PDV+S G++I +
Sbjct: 144 NLMDAASIAAITALSHFRRPDVSSVGEEITV 174
>gi|260806963|ref|XP_002598353.1| hypothetical protein BRAFLDRAFT_261208 [Branchiostoma floridae]
gi|229283625|gb|EEN54365.1| hypothetical protein BRAFLDRAFT_261208 [Branchiostoma floridae]
Length = 444
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 112/150 (74%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLAQVS + PK RP EG + IN ELSPMASP FE GR T++ + +NR LE+ ++
Sbjct: 53 TKVLAQVSGKIEEPKKNRPTEGSIIINLELSPMASPAFEPGRPTESGIEMNRILERNIRD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +D ESLC+VA EKVW++R D++VLN +GN++ SIAA+ AL+HFR PDV+ G+++
Sbjct: 113 SRAVDTESLCIVAGEKVWSIRADVHVLNDEGNIMDAASIAAITALSHFRRPDVSVMGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+HS ++DP+P+++ H PV +++A F+ G
Sbjct: 173 TVHSPEDRDPVPLSVHHMPVCVTFAFFDQG 202
>gi|390333942|ref|XP_788833.3| PREDICTED: exosome complex component RRP45-like [Strongylocentrotus
purpuratus]
Length = 479
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 113/150 (75%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +LAQVSC +V PK RPNEG LF+N ELSPMAS FE GR +D + +NR LE+ K+
Sbjct: 51 TRILAQVSCEVVEPKENRPNEGQLFVNLELSPMASTTFEAGRLSDYGIELNRLLERTVKD 110
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +D+ESLC+VA EKVW +R+D++VLN+DGN+L +AALAAL+HFR PDVT G+ +
Sbjct: 111 SRAVDVESLCIVAGEKVWKIRLDVHVLNHDGNILDSACLAALAALSHFRRPDVTVIGESV 170
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
IHS ++DP+P+ + H PV +++A ++ G
Sbjct: 171 TIHSPQDRDPVPLNVHHIPVCVTFAFYHKG 200
>gi|350529331|ref|NP_001121760.2| uncharacterized protein LOC100003412 [Danio rerio]
Length = 234
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 138/215 (64%), Gaps = 11/215 (5%)
Query: 31 GEDESILKSTTTLEQLLEEINFQRAKEKRQYLRNDM-----FLTQGTSYWTDLFVRYFLF 85
G+ + + +L+ +L+ I +R R +R D+ F +WT +F YF+
Sbjct: 12 GQSDDPAEPDESLQHMLKAIADER---NRLNVRQDLSGLGCFKDDRIVFWTWMFSTYFME 68
Query: 86 QTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWEETVYL 144
+ D D+LF+VR+K S N + EVEV+R+DS+KLP +GDPD+DWEE+VYL
Sbjct: 69 KWAPRQD--DMLFYVRRKLSYVSEDNTEGKKVEVEVYRRDSKKLPGLGDPDIDWEESVYL 126
Query: 145 NMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFT 204
N+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+KGE +M+YP + F
Sbjct: 127 NLILQKLDYVVTCAVCTRSDAGDIHIHKKKSQQVFASPSKHPMDSKGEESKMSYPNIFFM 186
Query: 205 VDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSV 239
+DNF EVF D+ V +GEMVCVELVASD++ + + V
Sbjct: 187 IDNFEEVFSDMTVGEGEMVCVELVASDKSNTFQGV 221
>gi|348582824|ref|XP_003477176.1| PREDICTED: exosome complex component RRP45-like [Cavia porcellus]
Length = 439
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D + ++ +I G C V+ + VL QVSC +V PK R EG+LF N ELS
Sbjct: 24 LDGRQTYDYRNIKISFGTDYGCCIVELGKTRVLGQVSCELVAPKLNRATEGILFFNLELS 83
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDG 544
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DG
Sbjct: 84 QMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDG 143
Query: 545 NLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
N++ SIAA+ AL HFR PDV G+++ +++ E+DP+ ++I H P+ +S+A F G+
Sbjct: 144 NIIDAASIAAIVALCHFRRPDVCVQGEEVTLYTPEERDPVALSIHHMPICVSFAFFQQGT 203
Query: 605 EGSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 204 YLLVDPNEREERVMDGLLVIAMNKHR 229
>gi|240849627|ref|NP_001155833.1| 3 exoribonuclease-like [Acyrthosiphon pisum]
gi|239791374|dbj|BAH72161.1| ACYPI010191 [Acyrthosiphon pisum]
Length = 400
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 112/147 (76%), Gaps = 8/147 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V AQVSC + P +RPNEG+L I+AEL+ + + IN+ LE+ +K+
Sbjct: 53 TRVFAQVSCEIYQPNNSRPNEGVLQISAELA--------GDNKINDLTKINQVLERFYKD 104
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCIDLE+LC++AEEKVW ++VDL+VLN DGN LGCCSIA LAAL HFR+PDV STG+++
Sbjct: 105 SKCIDLEALCIIAEEKVWKIKVDLSVLNMDGNTLGCCSIATLAALMHFRYPDVVSTGEKV 164
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
+++S++E+DPIP+++ H+PV S+A+F
Sbjct: 165 VVYSSSERDPIPLSLHHHPVIASFAIF 191
>gi|159155804|gb|AAI54551.1| Zgc:172139 protein [Danio rerio]
Length = 208
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 119/167 (71%), Gaps = 3/167 (1%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IG 132
+WT +F YF+ + D D+LF+VR+K S N + EVEV+R+DS+KLP +G
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLSYVSEDNTEGKKVEVEVYRRDSKKLPGLG 88
Query: 133 DPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGE 192
DPD+DWEE+VYLN+I+ + DY +T A+CTR+ + + K+ SQ+V+ASPS+ MD+KGE
Sbjct: 89 DPDIDWEESVYLNLILQKLDYVVTCAVCTRSDAGDIHIHKKKSQQVFASPSKHPMDSKGE 148
Query: 193 VEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSV 239
+M+YP + F +DNF EVF D+ V +GEMVCVELVASD++ + + V
Sbjct: 149 ESKMSYPNIFFMIDNFEEVFSDMTVGEGEMVCVELVASDKSNTFQGV 195
>gi|187607878|ref|NP_001120226.1| exosome component 9 [Xenopus (Silurana) tropicalis]
gi|169642591|gb|AAI60389.1| LOC100145275 protein [Xenopus (Silurana) tropicalis]
Length = 406
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 119/177 (67%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVS +V PK RP EG+LF + +SPMA P FE GR ++ SV +NR LE+C +
Sbjct: 53 TRVLCQVSSEIVTPKMNRPTEGILFFDLAISPMAFPGFEMGRNSELSVKLNRLLERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCV A EKVW +RVDL++LN++GN++ SIAA+A L HFR PDV+ G+++
Sbjct: 113 SKCIDTESLCVAAGEKVWQIRVDLHLLNHEGNIIDAASIAAIAGLCHFRRPDVSVQGEEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
+++ E+DP+P++I H P+ +S+A F G P E +D L +S ++ +
Sbjct: 173 TVYTPEERDPVPLSIHHMPICVSFAFFQQGIYLLVDPSEREEWVMDGLLVISMNKHR 229
>gi|350644351|emb|CCD60900.1| hypothetical protein Smp_199160 [Schistosoma mansoni]
Length = 521
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 126/203 (62%), Gaps = 16/203 (7%)
Query: 118 EVEVFRKDSRKLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQ 176
E+ VFR++S LP + D VDWEETVYLN+++ F Y +T+A+CTRT P+ Q+LK+ SQ
Sbjct: 2 ELSVFRRNSSNLPKLTDDYVDWEETVYLNLLMQYFVYVVTVAVCTRTGPQEWQILKKFSQ 61
Query: 177 KVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSV 236
VYASPS R+M+ KG EE+ YP + FT+DN+ E F + ++RD E + VEL A DR G V
Sbjct: 62 TVYASPSHRQMNMKGSYEEIVYPDLYFTIDNYEEAFGECVLRDSECINVELTAYDRHGRV 121
Query: 237 KSVIFLGSIRYDALKRVYDARTSV----------SNKFTQRMSFGIFSNNSNSRIE---- 282
V FLG++ YD +K+ YD + S RMS +S++S I+
Sbjct: 122 HGVCFLGTVSYDTIKQFYDRSSQACSTGNLVNHRSGYRDNRMSNSYYSSSSPPNIDYTST 181
Query: 283 -FVKMKGPQGKGFAEMAVTKPKG 304
F+++ GPQ KG AE+A+ K
Sbjct: 182 RFMRVIGPQAKGSAEIAIKSMKN 204
>gi|410056072|ref|XP_003317357.2| PREDICTED: uncharacterized protein KIAA0930 homolog [Pan
troglodytes]
Length = 414
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 146/247 (59%), Gaps = 26/247 (10%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSS------RNLPKFETEVEVFRKDSR 127
+WT +F YF+ + D D+LF+VR+K + S R + E EVEV+R+DS+
Sbjct: 31 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSGSESGADGRKAAEPEVEVEVYRRDSK 88
Query: 128 KLP-IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
KLP +GDPD+DWEE+V LN+I+ + DY +T A+CTR + + K+ SQ+V+ASPS+
Sbjct: 89 KLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHP 148
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNE-----VFHDILVRD---GEMVCVELVASDRAGSVKS 238
MD+KGE +++YP + F +D+F E H R+ +V E++A A V S
Sbjct: 149 MDSKGEESKISYPNIFFMIDSFEEPMRATCLHLKCERELPPQSLVPWEVMADGVA--VTS 206
Query: 239 VIFLGSIRYDALKR----VYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGF 294
+ L S + + A SV+ + Q+MSFG + S +EFV+MKGPQGKG
Sbjct: 207 SLSLASCDWPWERSESPPTKQADVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGH 263
Query: 295 AEMAVTK 301
AEMAV++
Sbjct: 264 AEMAVSR 270
>gi|448081285|ref|XP_004194851.1| Piso0_005372 [Millerozyma farinosa CBS 7064]
gi|359376273|emb|CCE86855.1| Piso0_005372 [Millerozyma farinosa CBS 7064]
Length = 305
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 104/158 (65%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S++ +VS +V P RP EG+ IN E+SPMASPQFE GR +D ++I+R +EK +
Sbjct: 55 SKLTVRVSAEVVKPFEDRPFEGIFTINTEISPMASPQFEQGRVSDDEILISRLIEKAIRR 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLE+LC+VA KVW +R D+NVL +DG ++ S + AL HFR PDV+ G +
Sbjct: 115 SNALDLEALCMVAGAKVWYIRADVNVLEFDGGIIDAASFGVMVALQHFRKPDVSIHGSDV 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
I+HS E++P+P+++LH P+ ++++ FN + G
Sbjct: 175 IVHSLQEREPVPLSVLHVPICVTFSFFNPSDSEENIKG 212
>gi|289740849|gb|ADD19172.1| exosomal 3'-5' exoribonuclease complex subunit Rrp45 [Glossina
morsitans morsitans]
Length = 320
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 96/129 (74%)
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
MA+ FE GR + +V INR LE+ FK+S+ IDLESLCV+++E+VW +RVDLNVLN++GN
Sbjct: 1 MAASHFEAGRNCELTVQINRTLERTFKDSRAIDLESLCVISDERVWMLRVDLNVLNHEGN 60
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
L+ CCS+A L ALAHFR PDV+ D+I IH++AEK+P+ M + HYPV +SY VF+GG
Sbjct: 61 LIDCCSVATLCALAHFRRPDVSVIEDEIRIHTSAEKEPLKMVMHHYPVCVSYVVFDGGRI 120
Query: 606 GSTVPGFTE 614
P E
Sbjct: 121 AIADPTVAE 129
>gi|190345706|gb|EDK37633.2| hypothetical protein PGUG_01731 [Meyerozyma guilliermondii ATCC
6260]
Length = 312
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 105/158 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++ +VS + P RP EG+ IN E+SPMASPQFE G+ +D V+++R +EK +
Sbjct: 62 TKLAVRVSAEIAKPYDDRPFEGIFTINTEISPMASPQFENGKNSDDEVLVSRIVEKAIRR 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLESLC+VA KVW VR D+N L++DG L+ C++ + AL HFR PDV+ G+ I
Sbjct: 122 SNALDLESLCIVAGSKVWAVRADVNFLDFDGGLIDACALGVMVALQHFRKPDVSIDGESI 181
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
++HS E+ P+ ++ILH P+ +S++ FN TV G
Sbjct: 182 VVHSMDERQPVALSILHVPLCVSFSFFNPSDIEETVKG 219
>gi|448085760|ref|XP_004195940.1| Piso0_005372 [Millerozyma farinosa CBS 7064]
gi|359377362|emb|CCE85745.1| Piso0_005372 [Millerozyma farinosa CBS 7064]
Length = 305
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 446 VWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINR 505
V W K +++ +VS +V P RP EG+ IN E+SPMASPQFE GR +D ++++R
Sbjct: 48 VEIDWGK-TKLTVRVSAEVVKPFEDRPFEGIFTINTEISPMASPQFEQGRVSDDEILMSR 106
Query: 506 FLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
+EK + S +DLE+LC+VA KVW +R D+NVL +DG ++ S + AL HFR PD
Sbjct: 107 LIEKAIRRSNALDLEALCMVAGAKVWYIRADVNVLEFDGGIIDAASFGVMVALQHFRKPD 166
Query: 566 VTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
V+ G +IIHS E++P+P+++LH P+ ++++ FN + G
Sbjct: 167 VSIHGSDVIIHSLQEREPVPLSVLHVPICVTFSFFNPSDSEENIKG 212
>gi|260950159|ref|XP_002619376.1| hypothetical protein CLUG_00535 [Clavispora lusitaniae ATCC 42720]
gi|238846948|gb|EEQ36412.1| hypothetical protein CLUG_00535 [Clavispora lusitaniae ATCC 42720]
Length = 305
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 103/158 (65%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++ +VSC + P RP EG IN E+S MASP FE G+ +D V+I+R +EK +
Sbjct: 55 TKLAVRVSCEIGKPFEDRPFEGTFTINTEISSMASPMFENGKNSDEEVLISRLIEKAVRR 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLESLCV+A EKVW++R D+N LNYDG L+ I + AL HF+ PDV+ G +
Sbjct: 115 SNALDLESLCVIAGEKVWHIRADINFLNYDGGLIDASCIGVMTALQHFKKPDVSIQGTDV 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
I+S E+ P+P++ILH P+ ++Y+ FN G + + G
Sbjct: 175 TIYSFDERQPVPLSILHVPICVTYSFFNPGDKEENIKG 212
>gi|146420206|ref|XP_001486060.1| hypothetical protein PGUG_01731 [Meyerozyma guilliermondii ATCC
6260]
Length = 312
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 104/158 (65%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++ +V + P RP EG+ IN E+SPMASPQFE G+ +D V+++R +EK +
Sbjct: 62 TKLAVRVLAEIAKPYDDRPFEGIFTINTEISPMASPQFENGKNSDDEVLVSRIVEKAIRR 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLESLC+VA KVW VR D+N L++DG L+ C++ + AL HFR PDV+ G+ I
Sbjct: 122 SNALDLESLCIVAGSKVWAVRADVNFLDFDGGLIDACALGVMVALQHFRKPDVSIDGESI 181
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
++HS E+ P+ ++ILH P+ +S++ FN TV G
Sbjct: 182 VVHSMDERQPVALSILHVPLCVSFSFFNPSDIEETVKG 219
>gi|58264608|ref|XP_569460.1| exosome complex exonuclease rrp45 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134109839|ref|XP_776469.1| hypothetical protein CNBC5230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259145|gb|EAL21822.1| hypothetical protein CNBC5230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225692|gb|AAW42153.1| exosome complex exonuclease rrp45, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 281
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 101/147 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +LAQVS +V P+ RP EG L IN+E+ PMAS +E GR D VMI R LEK +
Sbjct: 54 TAILAQVSATIVKPRDDRPYEGFLLINSEIGPMASSVYENGRPGDDEVMIGRLLEKSIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
++ ID E+LC++A EKVW +R+ L+ L+ GNLL C ++A +AAL HFR PDV GD++
Sbjct: 114 TEAIDREALCILAGEKVWQLRLTLHFLSDSGNLLDCAALAGMAALKHFRKPDVEVIGDEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
IIHS E+ P+P+ I H P+ +++A F
Sbjct: 174 IIHSPEERAPVPLAIHHTPLCLTFAYF 200
>gi|195379528|ref|XP_002048530.1| GJ11305 [Drosophila virilis]
gi|194155688|gb|EDW70872.1| GJ11305 [Drosophila virilis]
Length = 423
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 122/209 (58%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +++ ++ DV +W +++ GE ++VLAQVSC++ P + R NEG
Sbjct: 31 DGRKSNEFRDVKLTFGADWGTVAVSIGE---------TKVLAQVSCDIGTPSSARANEGT 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
LF+N ++ +A + +N LE+ FK S+C+DLESLC+ E+ VW VRVD
Sbjct: 82 LFLNVDIKGVAFLDEAQATHDQRFLTLNSLLERTFKSSRCLDLESLCIAVEQSVWCVRVD 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NVLN+DGNL +IAALAAL HFR P+V+ ++I S E++ +P+ LHYPV+++
Sbjct: 142 INVLNHDGNLYDASTIAALAALMHFRRPEVSYVEEEIRTFSERERELLPLLFLHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y V+ S+ P E D+ + LS
Sbjct: 202 YCVYKSSSQPLVDPTLLEENAADSVIVLS 230
>gi|328767537|gb|EGF77586.1| hypothetical protein BATDEDRAFT_91577 [Batrachochytrium
dendrobatidis JAM81]
Length = 276
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 105/161 (65%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +++ VSC +V P + P++G++ N E SPMASP FE ++ ++I+R LEK +
Sbjct: 55 TRIMSTVSCEIVRPSSGNPSDGVIHFNTEFSPMASPAFEVDSTSENEILISRMLEKALRR 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
++ +D E LC+VA EKVW +RVD+ VLN++GN+L C IAA+ +L HF+ PDVT G+ +
Sbjct: 115 ARVVDTEGLCIVAGEKVWAIRVDIRVLNHEGNILDCACIAAMCSLLHFKRPDVTVIGEDV 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE 614
IH+ EK+PI + I H P+ +++A F+ G P E
Sbjct: 175 TIHTLEEKNPIGLNIHHIPICVTFAFFHQGEYQVIDPSLLE 215
>gi|345569202|gb|EGX52070.1| hypothetical protein AOL_s00043g460 [Arthrobotrys oligospora ATCC
24927]
Length = 298
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 104/156 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA++S ++ P+ RP EG I+ E+ PMASP FE GR TD ++R LEK +
Sbjct: 54 TRVLARISAEIIRPRPDRPFEGTFTISTEMGPMASPSFEVGRPTDLDNTLSRLLEKSIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLESLC+V ++VW++R DL+ L++DGNL+ IA + ALAHFR P VT +G+ I
Sbjct: 114 STALDLESLCIVTAQRVWSLRADLHFLSHDGNLIDTACIATITALAHFRLPVVTVSGEDI 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
IH E+ P+P+++LH+P+ ++++ F +G V
Sbjct: 174 TIHPVTERVPVPLSLLHWPICVTFSFFGEDDDGEMV 209
>gi|195480861|ref|XP_002101422.1| GE15642 [Drosophila yakuba]
gi|194188946|gb|EDX02530.1| GE15642 [Drosophila yakuba]
Length = 415
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +R+ + DV+ +W +++ G+ ++VL V+C+M P +RPNEG
Sbjct: 31 DGRRSNECRDVELTFGADWGTVAVSMGD---------TKVLTHVTCDMGAPATSRPNEGK 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L +N L +A S+ +N LE+ F+ S+ +DLESLCV AE+ VW +RVD
Sbjct: 82 LQLNVNLGGVAFLDEVQTTHDQRSLTLNSLLERTFRSSRSVDLESLCVAAEQHVWCIRVD 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NVLN+DGNL +IA LAAL HFR PDVT T D++ I++ E++ IP+ LHYPV+++
Sbjct: 142 VNVLNHDGNLYDASTIATLAALMHFRRPDVTFTDDELRIYTEKEREFIPLLFLHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y ++ + P E D+ + LS
Sbjct: 202 YCIYKSSGQPIVDPTLLEENAADSVIVLS 230
>gi|321253395|ref|XP_003192721.1| exosome complex exonuclease rrp45 [Cryptococcus gattii WM276]
gi|317459190|gb|ADV20934.1| Exosome complex exonuclease rrp45, putative [Cryptococcus gattii
WM276]
Length = 281
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 103/155 (66%), Gaps = 1/155 (0%)
Query: 446 VWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINR 505
V C K S +LAQVS +V P+ RP EG L IN+E+ PMAS +E GR D VMI R
Sbjct: 47 VECRLGKTS-ILAQVSATIVKPRDDRPYEGFLLINSEIGPMASSVYENGRPGDDEVMIGR 105
Query: 506 FLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
LEK + ++ ID E+LC++A EKVW +R+ L+ L+ GNLL C ++A +AAL HFR PD
Sbjct: 106 LLEKSIRRTEAIDREALCILAGEKVWQLRLTLHFLSDSGNLLDCAALAGMAALKHFRKPD 165
Query: 566 VTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
V GD++IIHS E+ P+ + I H P+ +++A F
Sbjct: 166 VEVIGDEVIIHSPDERAPVALAIHHTPLCLTFAYF 200
>gi|302685534|ref|XP_003032447.1| hypothetical protein SCHCODRAFT_15142 [Schizophyllum commune H4-8]
gi|300106141|gb|EFI97544.1| hypothetical protein SCHCODRAFT_15142 [Schizophyllum commune H4-8]
Length = 281
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 110/172 (63%), Gaps = 5/172 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+AQV MV P RP +G++ I++ELSPMAS ++E GR ++ V+I R L+K K
Sbjct: 53 TRVVAQVDAKMVRPPPERPFDGIITIHSELSPMASTEYEIGRASEEEVVITRVLDKLIKR 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +D ESLCV+A E+VW+VR+ ++ L GN+L C AA+AAL HFR PDV GD++
Sbjct: 113 SEAVDRESLCVLAGERVWHVRLTIHCLADAGNMLDCACFAAMAALKHFRRPDVEVVGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALS 625
IH +E+ P+P+ I H P +++A F GS P + QL+ LAL
Sbjct: 173 TIHPPSERAPVPLAINHAPYCLTFAFF-----GSGAPPLLDPSQLEATLALG 219
>gi|195020434|ref|XP_001985193.1| GH14641 [Drosophila grimshawi]
gi|193898675|gb|EDV97541.1| GH14641 [Drosophila grimshawi]
Length = 415
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 122/209 (58%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +++ ++ DV +W +++ G+ ++VLAQVSC++ P + R NEG
Sbjct: 31 DGRKSNEFRDVKLTFGADWGTVALSMGD---------TKVLAQVSCDIGTPSSARGNEGT 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L +N ++ +A + +N LE+ F+ S+C+DLESLC+ E+ VW VRVD
Sbjct: 82 LHLNVDIKGVAFLDEVQATHDQRQLTLNSLLERTFRSSRCLDLESLCIATEQHVWCVRVD 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NVLN+DGNL +IAALAAL HFR PDV+ D+I +S E++ +P+ LHYPV+++
Sbjct: 142 INVLNHDGNLYDASTIAALAALMHFRRPDVSFIEDEIRTYSERERELMPLLFLHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y V+ ++ P E D+ + LS
Sbjct: 202 YCVYKSSTQPLVDPTLLEENAADSIIVLS 230
>gi|441618221|ref|XP_003281319.2| PREDICTED: uncharacterized protein KIAA0930 homolog [Nomascus
leucogenys]
Length = 417
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 43/266 (16%)
Query: 74 YWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLP---KFETEVEVFRKDSRKLP 130
+WT +F YF+ + D D+LF+VR+K +SS + K + K P
Sbjct: 13 FWTWMFSTYFMEKWAPRQD--DMLFYVRRKLAYSSSESCADGRKVSDPRPRPLRPCPKHP 70
Query: 131 IG--------------DPDVDW-EETVYLNMIIHQFDYTLT---------------LAIC 160
G W +++V+L + F T L +
Sbjct: 71 CGVCSQRACGLSYSAHAYQRPWTKQSVFLGSPLCAFGRRGTWLCVLLALRWWPEPCLWLW 130
Query: 161 TRTSP-----KHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDI 215
T + P HL Q+V+ASPS+ MD+KGE +++YP + F +D+F EVF D+
Sbjct: 131 TGSGPVCWVGPHLSSKSAFFQQVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDM 190
Query: 216 LVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSN 275
V +GEMVCVELVASD+ + + VIF GSIRY+ALK+VYD R SV+ + Q+MSFG +
Sbjct: 191 TVGEGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFY-- 248
Query: 276 NSNSRIEFVKMKGPQGKGFAEMAVTK 301
S +EFV+MKGPQGKG AEMAV++
Sbjct: 249 -KYSNMEFVRMKGPQGKGHAEMAVSR 273
>gi|403170373|ref|XP_003329715.2| exosome complex component RRP45 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168691|gb|EFP85296.2| exosome complex component RRP45 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 288
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 127/195 (65%), Gaps = 6/195 (3%)
Query: 440 AENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT 499
AE+G +V C + + V A VS ++ P A RP EGL I++E++PMA+ ++TGR ++
Sbjct: 41 AEDGHSVDCS-LGNTRVAAHVSASITKPWADRPFEGLFQISSEINPMANFIYDTGRSSEN 99
Query: 500 SVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALA 559
+ I+R L+K S ID E+LC++A + VW++R+DL+ LN +GNLL C SIAA+AAL
Sbjct: 100 EIQISRMLDKSLSRSGVIDKEALCILAGQMVWSIRLDLHFLNDEGNLLDCASIAAIAALQ 159
Query: 560 HFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV---PGFTECI 616
F+ PDVT G++I IHS E+ P+P+T+ H P++++Y F S S+V P + E
Sbjct: 160 TFQRPDVTLVGEEITIHSIQERVPVPLTLHHTPISLTYGFFELDSHKSSVVLDPNYLEE- 218
Query: 617 QLDTA-LALSQDRQK 630
QL T + L+ + QK
Sbjct: 219 QLSTGTITLALNPQK 233
>gi|194891452|ref|XP_001977495.1| GG18224 [Drosophila erecta]
gi|190649144|gb|EDV46422.1| GG18224 [Drosophila erecta]
Length = 415
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 120/209 (57%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +R+ + DV+ +W +++ G+ ++VL +V+C+M P +RPNEG
Sbjct: 31 DGRRSNECRDVELTFGSDWGTVAVSMGD---------TKVLTRVTCDMGTPATSRPNEGK 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
+N L+ +A S+ +N LE+ F+ S+ +DLESLCV AE VW +RVD
Sbjct: 82 FQLNVNLAGVAFLDELQTTHDQRSLTLNSLLERTFRSSRSVDLESLCVAAEHHVWCIRVD 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NVLN+DGNL +IA LAAL HFR PDVT D++ I++ E+D IP+ LHYPV+++
Sbjct: 142 VNVLNHDGNLYDASTIATLAALMHFRRPDVTFADDKLRIYTEKERDFIPLLFLHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y ++ + P E D+ + LS
Sbjct: 202 YCIYKSSWQPIVDPTLLEENAADSVIVLS 230
>gi|405123132|gb|AFR97897.1| exosome complex exonuclease rrp45 [Cryptococcus neoformans var.
grubii H99]
Length = 282
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 101/148 (68%), Gaps = 1/148 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +LAQVS +V P+ RP EG L IN+E+ PMAS +E GR D VMI R LEK +
Sbjct: 54 TAILAQVSAAIVKPRDDRPYEGFLLINSEIGPMASSVYENGRPGDDEVMIGRLLEKSIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
++ ID E+LC++A EKVW +R+ L+ L+ GNLL C ++A +AAL HFR PDV GD++
Sbjct: 114 TEAIDREALCILAGEKVWQLRLTLHFLSDSGNLLDCAALAGMAALKHFRKPDVEVIGDEV 173
Query: 574 II-HSAAEKDPIPMTILHYPVTISYAVF 600
II HS E+ P+P+ I H P+ +++A F
Sbjct: 174 IIQHSPDERAPVPLAIHHTPLCLTFAYF 201
>gi|392572304|gb|EIW65456.1| hypothetical protein TREMEDRAFT_70580 [Tremella mesenterica DSM
1558]
Length = 281
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Query: 438 ISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGR 495
I E G + C + + VLAQV+ +V P+ RP EG L IN+E+SPMAS +E GR
Sbjct: 36 IELEFGAELGCCQCRLGKTAVLAQVTATIVKPRDDRPYEGSLLINSEISPMASTAYENGR 95
Query: 496 QTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAAL 555
++ ++I R LEK + ++ +D E+LC++A +KVW +R+ L+ L+ GNLL C S+A++
Sbjct: 96 SSEDELIITRMLEKSIRRTEAVDREALCIIAGDKVWQLRLTLHFLSDSGNLLDCASLASM 155
Query: 556 AALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
AAL HFR P++ GD++IIHS E+ P+P+++ H P+ +++A F
Sbjct: 156 AALRHFRKPEIEVIGDEVIIHSPEERAPVPLSMHHVPLCVTFAYF 200
>gi|195457250|ref|XP_002075492.1| GK14785 [Drosophila willistoni]
gi|194171577|gb|EDW86478.1| GK14785 [Drosophila willistoni]
Length = 415
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +++ D+ DV +W ++ G+ ++VLAQVSC++ P + RPNEG
Sbjct: 31 DGRKSGDFRDVKLTFGADWGTVIVAIGD---------TKVLAQVSCDIGTPSSARPNEGT 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L +N L +A + +N LE+ F+ S+ +DLESLCV AE+ VW VRVD
Sbjct: 82 LHLNVSLGGVAYLNESQTTHDQRFLTLNSLLERTFRNSRSLDLESLCVAAEQHVWCVRVD 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+ VLN+DGNL ++AALAAL HFR PDVT ++I I+S E++ IP+ LHYPV+++
Sbjct: 142 ITVLNHDGNLYDASTVAALAALMHFRRPDVTFLDEEIRIYSDKERELIPLLFLHYPVSVT 201
Query: 597 YAVFNGGSEGSTV-PGFTECIQLDTALALS 625
Y ++ S V P E D+ + LS
Sbjct: 202 YCLYKSNSHYPYVDPILLEENAADSIIVLS 231
>gi|296423319|ref|XP_002841202.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637437|emb|CAZ85393.1| unnamed protein product [Tuber melanosporum]
Length = 293
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 102/150 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+VS +V P RP +G+ I EL PMASP FE GRQT+ V+++R +EK +
Sbjct: 54 TRVLARVSAEVVKPFTDRPFDGIFTITTELGPMASPAFEPGRQTEQEVLLSRLIEKAIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W +R D++ L++DG L+ IA +AAL HFR PDV+ G+++
Sbjct: 114 SNALDTESLCIVAGQKCWQIRADVHFLSHDGALVDASCIAVVAALQHFRRPDVSVEGEKV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
IH+ E+ P+P++ILH P+ ++++ + G
Sbjct: 174 TIHTMTERIPVPLSILHVPICVTFSFYLDG 203
>gi|310789357|gb|EFQ24890.1| 3' exoribonuclease family protein [Glomerella graminicola M1.001]
Length = 298
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 104/153 (67%), Gaps = 2/153 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+VS + +P RP EG+ I +ELSPMASP FE R T+ V+++R LEK +
Sbjct: 54 TRVLAKVSAEVTVPYTDRPFEGIFQITSELSPMASPAFEVNRPTEAEVLLSRILEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A +KVW+VR D++VL++DGNL +A +AAL HFR PD ++ G +
Sbjct: 114 SGALDTESLCLIAGQKVWSVRADVHVLSHDGNLTDAACLAVIAALRHFRKPDTSNEGQSL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEG 606
I + AE++P+P++ LH P ++++ F G EG
Sbjct: 174 TIFTPAEREPVPLSWLHSPFCVTFSFF--GDEG 204
>gi|440792691|gb|ELR13899.1| 3' exoribonuclease family, domain 1 domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 524
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 128/225 (56%), Gaps = 9/225 (4%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETG-RQTDTSVMINRFLEKCFKESKCIDLESLCVV 525
P A RP EG N E SPMAS FE G R ++ +V + R +E+ ++S+ ID E+LC+
Sbjct: 73 PYADRPTEGFFIFNTEFSPMASASFEVGARVSEEAVEVGRLIERSLRDSRAIDTEALCIR 132
Query: 526 AEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIP 585
A EKVW V++D++VL+ GNL+ SIA ++AL HFR PDV+ TGD I +HS A+++P+P
Sbjct: 133 AGEKVWAVQIDVHVLDDGGNLIDAASIATVSALLHFRRPDVSITGDAITVHSVADREPVP 192
Query: 586 MTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALAL--SQDRQKLGVDSAYANLVNK 643
++I H P+ +++AVF G + P F E L+ + L +Q R+ GV +
Sbjct: 193 LSIHHLPLCVTFAVFGDGDQVVVDPWFKEEQSLNGRVTLIHNQHRELCGVHKSGG----- 247
Query: 644 TDRILLDEGEKDSGETKVKVEKVGPGIADLISKSDIEPSGIKNQW 688
+ L+ K S VKV+ V I I+ PS + +
Sbjct: 248 -PGLPLNTLVKCSKIAAVKVQDVIQAIQSAITAQPPTPSAVPRPF 291
>gi|195128659|ref|XP_002008779.1| GI11625 [Drosophila mojavensis]
gi|193920388|gb|EDW19255.1| GI11625 [Drosophila mojavensis]
Length = 417
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 121/209 (57%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ ++A ++ DV +W +++ G+ ++VLAQVSC++ P + R NEG
Sbjct: 31 DGRKANEFRDVKLTFGSDWGTVAVSMGD---------TKVLAQVSCDIGTPSSARANEGT 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L++N ++ +A + +N LE+ F+ S+C+DLESLC+ E+ VW VRVD
Sbjct: 82 LYLNVDIKGVAFLDEIQSTHDQRFLTLNSLLERTFRSSRCLDLESLCIAVEQHVWCVRVD 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NVLN+DGNL +IAALAAL HFR P+V+ ++I S E++ +P+ LHYPV+++
Sbjct: 142 INVLNHDGNLYDASTIAALAALMHFRRPEVSYAEEKIHTFSERERELMPLLFLHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y ++ S P E D+ + LS
Sbjct: 202 YCLYKSSSNPLVDPTLLEENAADSIIVLS 230
>gi|407917787|gb|EKG11090.1| Exoribonuclease phosphorolytic domain 1 [Macrophomina phaseolina
MS6]
Length = 292
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 105/150 (70%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL ++S ++ P A R +G+ I+ E SPMASP FE GRQT+ V+++R LEK +
Sbjct: 54 TRVLVRISSDVTAPFADRKFDGIFNISTEFSPMASPAFEVGRQTEAEVILSRILEKAIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA K ++VR D+N+L++DGNL+ IA +AAL HFR PD+ G+++
Sbjct: 114 SGALDTESLCIVAGSKCFSVRADVNILDHDGNLIDASCIAIIAALQHFRRPDIAVEGEKV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ S E++P+P+++LH+P+ ++++ +N G
Sbjct: 174 TVFSPREREPVPLSMLHHPLCVTFSYYNNG 203
>gi|340371255|ref|XP_003384161.1| PREDICTED: exosome complex component RRP45-like [Amphimedon
queenslandica]
Length = 410
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V A V C +V+P+ RP +GLL+ N SPMA+P ++ G+ + T + + R L++CFKE
Sbjct: 57 TRVQACVGCEVVVPRPQRPTDGLLYFNVLPSPMAAPNYDIGKSSLT-MRVERLLDRCFKE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +D ESLC++A +KVW++RVD+++LN GN+ CC +A+ AL H R P VT +G+
Sbjct: 116 SRSLDTESLCIIAGQKVWSIRVDIHILNDSGNITDCCVMASFCALKHCRRPYVTVSGEHA 175
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
IH +E++P+P+ I H P+ I++ + G+
Sbjct: 176 TIHPVSEREPVPLNIHHTPICITFGFLSEGN 206
>gi|328861810|gb|EGG10912.1| hypothetical protein MELLADRAFT_33545 [Melampsora larici-populina
98AG31]
Length = 286
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 112/161 (69%), Gaps = 1/161 (0%)
Query: 440 AENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT 499
+E+G++V C + + V A VS + P+ RP EGLL ++AE++P+AS +E GR ++
Sbjct: 41 SEDGDSVECSLGR-TRVSAHVSATITRPRPDRPFEGLLQVSAEINPLASFVYEIGRASED 99
Query: 500 SVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALA 559
V ++R L+K S ID E+LC++A +KVW +RVDL+ LN +GN+L C S+AA+AAL
Sbjct: 100 EVHLSRLLDKTLVRSGVIDREALCILAGQKVWCIRVDLHFLNDEGNMLDCASVAAIAALQ 159
Query: 560 HFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
+FR PD+T G++I +HS E+ PIP+T+ H P+ +++A F
Sbjct: 160 NFRRPDITLVGEEITVHSFDERLPIPLTLHHLPICLTFAFF 200
>gi|347442048|emb|CCD34969.1| similar to exosome complex endonuclease 2/ribosomal RNA processing
protein [Botryotinia fuckeliana]
Length = 294
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 120/190 (63%), Gaps = 2/190 (1%)
Query: 418 SKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEG 475
SK ++ +D S + + ++ E G+ V+ + VL ++ + P R +G
Sbjct: 16 SKALKENLRIDGRSFDQFRALELEFGDEYGVADVRLGKTRVLVNITAEVTSPFPDRLFDG 75
Query: 476 LLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRV 535
+ I ELSPMASP FET R T+ V+++R LEK + S +D ESLC++A +K W+VR
Sbjct: 76 IFTITTELSPMASPAFETNRPTEQEVLLSRLLEKTLRRSAALDTESLCLIAGQKCWSVRA 135
Query: 536 DLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTI 595
D+++L++DGNL+ IA +AAL HFR PD ++ G+ + +++ AE++P+P+++LH+P+ +
Sbjct: 136 DVHILSHDGNLIDASCIAIIAALQHFRKPDTSTEGETVTVYTLAEREPVPLSLLHFPLCV 195
Query: 596 SYAVFNGGSE 605
+++ + G E
Sbjct: 196 TFSFYGKGQE 205
>gi|194766922|ref|XP_001965573.1| GF22565 [Drosophila ananassae]
gi|190619564|gb|EDV35088.1| GF22565 [Drosophila ananassae]
Length = 412
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +R+ + DV +W +++ GE ++VLAQVS ++ +P R NEG
Sbjct: 31 DGRRSNECRDVQLTFGADWGTVAVTLGE---------TKVLAQVSSDIGVPTTARANEGK 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L +N + +A + +N LE+ F+ S+C+DLESLCV AE+ VW VRVD
Sbjct: 82 LQLNVNIGGVAFLDEAQSTHDQRFLTLNSLLERTFRSSRCLDLESLCVAAEQHVWCVRVD 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NVLN+DGNL +IA LAAL H+R PDVT D++ I++ E++ P+ LHYPV+++
Sbjct: 142 INVLNHDGNLYDASTIATLAALMHYRRPDVTFAEDELRIYTEKEREFQPLLFLHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y ++ S+ P E D+ + LS
Sbjct: 202 YCIYKSSSQPIVDPSLLEENAADSVIVLS 230
>gi|320163129|gb|EFW40028.1| polymyositis/scleroderma autoantigen 1 [Capsaspora owczarzaki ATCC
30864]
Length = 313
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 9/170 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ QVSC + P RP EG + N ELSPMASP FE GR ++ ++ ++R +E+ K+
Sbjct: 53 TRVMVQVSCELTKPFPDRPAEGAVQFNVELSPMASPAFEPGRPSEQAIELSRMVERVVKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT----ST 569
S ID SLCV++ E VWN+RVDL+ L++DGNL +AALA L HFR P+V+ S+
Sbjct: 113 SNAIDTTSLCVISGEAVWNIRVDLHALDHDGNLSDALCMAALAGLIHFRKPEVSMPSLSS 172
Query: 570 GDQ-----IIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE 614
GD+ +IIH E++P+P+++ H P+ +++A + G P F E
Sbjct: 173 GDESVAGNLIIHDVREREPLPLSVHHMPLCVTFAFLDDGEHMVVDPTFQE 222
>gi|324510352|gb|ADY44328.1| Exosome complex exonuclease RRP45 [Ascaris suum]
Length = 431
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V AQV+CN+V PK+ R N G + ++ ++SPM SP E GR + + R LE ++
Sbjct: 53 TKVSAQVTCNIVEPKSARGNMGAVEVHVDMSPMGSPTHEDGRLGPKGIELTRVLELLCRD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+DLE+LC+ A +KVW +RVD+++L DG L+ C S+AA+ ALAHFR PDVT D I
Sbjct: 113 CGAVDLEALCLTAYKKVWQIRVDVHILQADGALIDCASVAAITALAHFRRPDVTVLVDSI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQKLGV 633
++H + +K PIP+T+ H P+ +S+ + G + P E + L A ++ +++
Sbjct: 173 LVHGSDKKAPIPLTVYHMPICVSFGIAPDGEQVVIDPTEREAMCLKGAFVVAANKRH--- 229
Query: 634 DSAYANLVNKTDRILLDE 651
+++T +LL+E
Sbjct: 230 ---EVCALHQTGNLLLNE 244
>gi|324513828|gb|ADY45664.1| Exosome complex exonuclease RRP45 [Ascaris suum]
Length = 419
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V AQV+CN+V PK+ R N G + ++ ++SPM SP E GR + + R LE ++
Sbjct: 53 TKVSAQVTCNIVEPKSARGNMGAVEVHVDMSPMGSPTHEDGRLGPKGIELTRVLELLCRD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+DLE+LC+ A +KVW +RVD+++L DG L+ C S+AA+ ALAHFR PDVT D I
Sbjct: 113 CGAVDLEALCLTAYKKVWQIRVDVHILQADGALIDCASVAAITALAHFRRPDVTVLVDSI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQKLGV 633
++H + +K PIP+T+ H P+ +S+ + G + P E + L A ++ +++
Sbjct: 173 LVHGSDKKAPIPLTVYHMPICVSFGIAPDGEQVVIDPTEREAMCLKGAFVVAANKRH--- 229
Query: 634 DSAYANLVNKTDRILLDE 651
+++T +LL+E
Sbjct: 230 ---EVCALHQTGNLLLNE 244
>gi|346319692|gb|EGX89293.1| 3' exoribonuclease [Cordyceps militaris CM01]
Length = 297
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 106/156 (67%), Gaps = 2/156 (1%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
V ++VLA+VS + +P + RP +G+ I +ELSPM +P FE R T+T V+++R LEK
Sbjct: 51 VGKTKVLAKVSAEVTVPFSDRPFDGVFTIASELSPMVAPSFEVNRPTETEVVLSRLLEKT 110
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG 570
+ S +D ESLC+VA +K W++R DL+VL +DGNLL +A +AAL HFR P+ T G
Sbjct: 111 IRRSGALDTESLCLVAAQKCWSIRADLHVLAHDGNLLDASCLAVIAALRHFRKPETTMEG 170
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEG 606
+ +++ AE++P+P++ LH P ++++ F G EG
Sbjct: 171 GVLTVYTPAEREPVPLSWLHSPFCVTFSFF--GEEG 204
>gi|400601572|gb|EJP69215.1| 3' exoribonuclease family protein [Beauveria bassiana ARSEF 2860]
Length = 297
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 104/149 (69%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLA+VS + +P + RP +G+ I +ELSPMA+P FE R T+T V+++R LEK +
Sbjct: 54 TKVLAKVSAEVTVPFSDRPFDGVFTIASELSPMAAPSFEVNRPTETEVILSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A +K W+VRVDL+VL ++GNLL +A +AAL HFR P+ T G +
Sbjct: 114 SGALDTESLCLIAGQKCWSVRVDLHVLAHEGNLLDTSCLAVVAALRHFRKPETTMEGGVL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNG 602
+++ AE+ P+P++ LH P ++++ F G
Sbjct: 174 TVYTPAERVPVPLSWLHSPFCVTFSFFGG 202
>gi|171685834|ref|XP_001907858.1| hypothetical protein [Podospora anserina S mat+]
gi|170942878|emb|CAP68531.1| unnamed protein product [Podospora anserina S mat+]
Length = 297
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+ S + +P A RP +G+ I ELSPM SP FE R T+T V+I+R LEK +
Sbjct: 54 TRVLAKASAELTVPYADRPLDGIFNIATELSPMTSPAFEVNRPTETEVLISRLLEKTVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W++RVD++VL++DGNL+ A +AAL HFR PD + G +
Sbjct: 114 SGALDTESLCLVAGQKCWSIRVDVHVLSHDGNLIDAACFAVVAALRHFRKPDTSMEGGVL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEG 606
+++ AE++P+P++ LH P ++++ F G EG
Sbjct: 174 TVYTPAEREPVPLSWLHSPFCVTWSFF--GEEG 204
>gi|426227184|ref|XP_004007702.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Ovis aries]
Length = 338
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
Query: 176 QKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGS 235
++V+ASPS+ MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ +
Sbjct: 72 KQVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTDT 131
Query: 236 VKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFA 295
+ VIF GSIRY+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG A
Sbjct: 132 FQGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHA 188
Query: 296 EMAVTK 301
EMAV++
Sbjct: 189 EMAVSR 194
>gi|429850259|gb|ELA25551.1| 3 exoribonuclease [Colletotrichum gloeosporioides Nara gc5]
Length = 298
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
+L +VS + +P A RP EG+ I ELSPMASP FE R T+ V+++R LEK + S
Sbjct: 56 ILVKVSAEVTVPYADRPFEGIFQIVTELSPMASPAFEVNRPTEAEVLLSRLLEKTIRRSG 115
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+D ESLC+VA +KVW+VR D++VL++DGNL + +AAL HFR PD ++ G+ + I
Sbjct: 116 ALDTESLCLVAGQKVWSVRADVHVLSHDGNLTDAACLGVIAALRHFRKPDTSNEGEALTI 175
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGGSEG 606
+ AE++P+P++ LH P ++++ + G EG
Sbjct: 176 FTPAEREPVPLSWLHSPFCVTFSFY--GDEG 204
>gi|365984549|ref|XP_003669107.1| hypothetical protein NDAI_0C02040 [Naumovozyma dairenensis CBS 421]
gi|343767875|emb|CCD23864.1| hypothetical protein NDAI_0C02040 [Naumovozyma dairenensis CBS 421]
Length = 306
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Query: 424 WTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAEL 483
+ DV + + ++ E G+ ++V ++SC + P RP EGL I+ E
Sbjct: 33 FRDVKIAFGDEYGDVTIEMGK---------TKVHCRISCQITQPYEDRPFEGLFLISTEN 83
Query: 484 SPMASPQFETGRQTDT-SVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNY 542
SPMA PQFE G T+ V+I R +EK + S +D+E LC+VA K W VR D++ LN
Sbjct: 84 SPMAGPQFENGNNTNEDEVLIARIIEKAVRRSGALDIEGLCIVAGSKCWAVRADVHFLNC 143
Query: 543 DGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
DG + IA +A L HFR PD+T G+Q+I+H E++P+P+ ILH P+ ++++ FN
Sbjct: 144 DGGFIDASCIAVMAGLLHFRKPDITVHGEQVIMHPVDEREPVPLGILHVPICVTFSFFN 202
>gi|367027518|ref|XP_003663043.1| hypothetical protein MYCTH_2304429 [Myceliophthora thermophila ATCC
42464]
gi|347010312|gb|AEO57798.1| hypothetical protein MYCTH_2304429 [Myceliophthora thermophila ATCC
42464]
Length = 293
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+ + + +P A RP +G+ I ELSPM SP FE R T+T V+++R LEK +
Sbjct: 54 TRVLAKATAEVTVPYADRPLDGIFTIATELSPMTSPAFEVNRPTETEVLLSRLLEKTVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W+VRVD++VL++DGNL A +AAL HFR PD + G ++
Sbjct: 114 SGALDTESLCLVAGQKCWSVRVDVHVLSHDGNLTDAACFAVVAALRHFRKPDTSMEGGRL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEG 606
+++ AE++P+P++ LH P ++++ F G EG
Sbjct: 174 TVYTPAEREPVPLSWLHSPFCVTWSFF--GDEG 204
>gi|358381167|gb|EHK18843.1| hypothetical protein TRIVIDRAFT_193923 [Trichoderma virens Gv29-8]
Length = 293
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 102/156 (65%), Gaps = 2/156 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+VS + +P RP +G+ I +EL PM +P FE R T+T V++ R LEK +
Sbjct: 54 TRVLAKVSAEVTVPFPDRPFDGIFQITSELGPMVAPSFEVNRPTETEVLLARLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W+VRVDL+VL+ DGNL+ A +AAL HFR PD + G+ +
Sbjct: 114 SGALDTESLCLVAGQKCWSVRVDLHVLSADGNLIDSSCFAVVAALRHFRKPDTSMEGETL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
I++AAE++P+P++ LH P S+ F G +G V
Sbjct: 174 TIYTAAEREPVPLSWLHSPFCTSFDFF--GEDGEIV 207
>gi|154301511|ref|XP_001551168.1| hypothetical protein BC1G_10425 [Botryotinia fuckeliana B05.10]
Length = 244
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 103/150 (68%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL ++ + P R +G+ I ELSPMASP FET R T+ V+++R LEK + S
Sbjct: 6 VLVNITAEVTSPFPDRLFDGIFTITTELSPMASPAFETNRPTEQEVLLSRLLEKTLRRSA 65
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+D ESLC++A +K W+VR D+++L++DGNL+ IA +AAL HFR PD ++ G+ + +
Sbjct: 66 ALDTESLCLIAGQKCWSVRADVHILSHDGNLIDASCIAIIAALQHFRKPDTSTEGETVTV 125
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
++ AE++P+P+++LH+P+ ++++ + G E
Sbjct: 126 YTLAEREPVPLSLLHFPLCVTFSFYGKGQE 155
>gi|358396358|gb|EHK45739.1| hypothetical protein TRIATDRAFT_140053 [Trichoderma atroviride IMI
206040]
Length = 293
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+VS + +P + RP +G+ I +EL PM +P FE R T+T V++ R LEK +
Sbjct: 54 TRVLAKVSAEVTVPFSDRPFDGIFQITSELGPMVAPSFEVNRPTETEVLLARLLEKTVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A +K W+VRVDL++L+ DGNL+ +A +AAL HFR PD + G+ +
Sbjct: 114 SGALDTESLCLIAGQKCWSVRVDLHILSADGNLIDSSCLAVVAALRHFRRPDTSIEGETL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
I++AAE++P+P++ LH P ++ F G +G V
Sbjct: 174 TIYTAAEREPVPLSWLHSPFCTTFDFF--GEDGEIV 207
>gi|156841697|ref|XP_001644220.1| hypothetical protein Kpol_1051p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156114858|gb|EDO16362.1| hypothetical protein Kpol_1051p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 305
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFK 512
++V +VSC++ P RP EGL FI+ E SPMA PQFE G T + V+ R +EK +
Sbjct: 54 TKVQCRVSCSIAQPYEDRPFEGLFFISTESSPMAGPQFENGNNTGEDEVLCARIIEKAVR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W +R D++ LN DG + IA +AAL HFR PD++ G+Q
Sbjct: 114 RSGALDIEGLCIVAGSKCWAIRADVHFLNCDGGFIDASCIAVMAALMHFRKPDISVFGEQ 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ +H E++P+P+ ILH P+ ++++ FN
Sbjct: 174 VTVHPVDEREPVPLGILHIPICVTFSFFN 202
>gi|378733642|gb|EHY60101.1| exoribonuclease like to ribonuclease PH [Exophiala dermatitidis
NIH/UT8656]
Length = 291
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 2/165 (1%)
Query: 439 SAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTD 498
AE G A + + V Q+S + P R EG+ I ELSP+ASP +E GRQT+
Sbjct: 41 GAEYGTATL--RLGKTRVHVQISAEVTKPLEERKFEGIFTIVTELSPIASPAYEVGRQTE 98
Query: 499 TSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
V+++R LEK + S +D ESLC++A K W+VR D++VL+ DG L+ IA +AAL
Sbjct: 99 QEVILSRILEKAIRRSNALDTESLCIIAGAKCWSVRADVHVLDSDGGLIDASCIAIVAAL 158
Query: 559 AHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
HFR PDV+ G+ + I++ AE+ P+P++++H PV I+++ ++GG
Sbjct: 159 RHFRRPDVSVDGENVTIYTMAERVPVPLSLMHNPVCITFSFYHGG 203
>gi|392587997|gb|EIW77330.1| ribosomal protein S5 domain 2-like protein [Coniophora puteana
RWD-64-598 SS2]
Length = 303
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 106/155 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQV MV P RP EGL+ I++E+SPMA P+++T R ++ + I+R L+K K
Sbjct: 59 TRVLAQVDAKMVKPLPERPYEGLITIHSEISPMAGPEYDTARPSEEEIGISRMLDKIVKR 118
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCV+A ++VW++R+ ++ ++ GN+L C +A++ AL HFR P+V GD++
Sbjct: 119 SDALDKESLCVLAGQRVWHLRLTVHFISDAGNMLDCAVLASMVALRHFRRPEVEVIGDEV 178
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGST 608
IIHS +E+ P+P+ + H P+ +++A F S ++
Sbjct: 179 IIHSPSERAPVPLALHHIPLCLTFAFFPPPSNPTS 213
>gi|344302579|gb|EGW32853.1| hypothetical protein SPAPADRAFT_136976 [Spathaspora passalidarum
NRRL Y-27907]
Length = 304
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 106/166 (63%), Gaps = 2/166 (1%)
Query: 446 VWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINR 505
V W K +++ +V+ + P RP EG+ IN+E+S MAS +F+T R ++ ++I R
Sbjct: 48 VEVSWGK-TKLACRVTATVTTPYEDRPFEGIFTINSEISTMASMRFDTSR-SNEEILIAR 105
Query: 506 FLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
+EK + S +DLESLC++A EKVW + VDLN LNYDGN + A + AL HF+ PD
Sbjct: 106 IIEKAVRRSNSLDLESLCIIAGEKVWEITVDLNYLNYDGNFIDVGCFAVMLALHHFKKPD 165
Query: 566 VTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
++ G+ I++H E+ P+P++ILH P+ ++Y+ +N + S + G
Sbjct: 166 ISINGNSIVVHDINERQPVPLSILHIPICLTYSFYNLTDKESNIKG 211
>gi|340959729|gb|EGS20910.1| hypothetical protein CTHT_0027490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 293
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+ S + +P A RP +G+ I ELSPM SP FE R T+T V+++R LEK +
Sbjct: 54 TRVLAKASAEVTVPYADRPLDGIFTIATELSPMTSPTFEVNRPTETEVLLSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W++RVD++V+++DGNL+ IA +AAL HFR PD + +
Sbjct: 114 SGALDTESLCLVAGQKCWSIRVDVHVMSHDGNLVDAACIAVVAALRHFRKPDTSIESGVL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEG 606
I++ AE++P+P++ LH P ++++ F G EG
Sbjct: 174 TIYTPAEREPVPLSWLHTPFCVTWSFF--GDEG 204
>gi|195168570|ref|XP_002025104.1| GL26867 [Drosophila persimilis]
gi|194108549|gb|EDW30592.1| GL26867 [Drosophila persimilis]
Length = 398
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 106/172 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+AQV+C+M P +RPNEG L + L+ ++ S+ +N LE+ F+
Sbjct: 59 TKVMAQVTCDMGTPTTSRPNEGKLQLYVTLAGVSYLDSVQKTHDKRSLTLNSLLERTFRT 118
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+C+DLESLCV +E VW +RVD+NVLN+DGNL ++A LAAL HFR PDVT T ++
Sbjct: 119 SRCVDLESLCVASELHVWCIRVDVNVLNHDGNLYDASTVAVLAALMHFRRPDVTFTDGEL 178
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALS 625
++ E+D IP+ LHYPV+++Y ++ + P E D+ + LS
Sbjct: 179 RTYTEKERDMIPLLFLHYPVSVTYCIYTSNFQPFVDPTLLEENTADSTIILS 230
>gi|198471344|ref|XP_001355587.2| GA21908 [Drosophila pseudoobscura pseudoobscura]
gi|198145876|gb|EAL32646.2| GA21908 [Drosophila pseudoobscura pseudoobscura]
Length = 398
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 106/172 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+AQV+C+M P +RPNEG L + L+ ++ S+ +N LE+ F+
Sbjct: 59 TKVMAQVTCDMGTPTTSRPNEGKLQLYVTLAGVSYLDSVQKTHDKRSLTLNSLLERTFRT 118
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+C+DLESLCV +E VW +RVD+NVLN+DGNL ++A LAAL HFR PDVT T ++
Sbjct: 119 SRCVDLESLCVASELHVWCIRVDVNVLNHDGNLYDASTVAVLAALMHFRRPDVTFTDGEL 178
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALS 625
++ E+D IP+ LHYPV+++Y ++ + P E D+ + LS
Sbjct: 179 RTYTEKERDMIPLLFLHYPVSVTYCIYTSNFQPFVDPTLLEENTADSTIILS 230
>gi|195351560|ref|XP_002042302.1| GM13365 [Drosophila sechellia]
gi|194124145|gb|EDW46188.1| GM13365 [Drosophila sechellia]
Length = 405
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +R+ + DV+ +W S++ G+ ++V+AQV+C M P +RPNEG
Sbjct: 31 DGRRSNESRDVELTFGTDWGSVAVSMGD---------TKVMAQVTCEMGPPALSRPNEGK 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L +N L +A S+ +N LE+ F+ SK IDLESLCV AE+ VW +RV+
Sbjct: 82 LHLNVLLGGVAFLDEAYSTHDQRSLKLNSLLERTFRSSKSIDLESLCVAAEKHVWCIRVN 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NV+N+DGNL SIA LAAL HFR PDV+ ++ I E++ +P+ HYPV+++
Sbjct: 142 VNVINHDGNLYDASSIATLAALMHFRRPDVSYKDGELCIFKQNEREFMPLLFHHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y V+ + P E D+ + LS
Sbjct: 202 YCVYKSSGQPILDPTLLEENAADSVIVLS 230
>gi|322709290|gb|EFZ00866.1| 3' exoribonuclease [Metarhizium anisopliae ARSEF 23]
Length = 288
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 108/159 (67%), Gaps = 2/159 (1%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
V ++++A+VS + +P RP +G+ I++ELSPMA+P FE R T+ V+++R LEK
Sbjct: 46 VADAKIVARVSAEVTVPFTDRPFDGIFTISSELSPMAAPSFEVNRPTEQEVLLSRILEKT 105
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG 570
+ S +D ESLC+VA +K W+VR D++VL++DGNLL A +AAL HFR P+ T G
Sbjct: 106 IRRSGALDTESLCLVAGQKCWSVRADVHVLSHDGNLLDVACFAVVAALRHFRKPETTMDG 165
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
+ + +++ AE++P+ ++ LH P ++++ F G +G TV
Sbjct: 166 ETLTVYTPAEREPVALSWLHSPFCVTFSFF--GHDGETV 202
>gi|385301287|gb|EIF45489.1| rrp45p [Dekkera bruxellensis AWRI1499]
Length = 261
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFE---------TGRQTDTSVMIN 504
+EV ++S ++ P RP EGL IN E+SPM SP FE + RQT ++I+
Sbjct: 21 TEVACKISASIEQPYKDRPFEGLFQINTEISPMCSPFFEVSQGAAGGTSSRQTSEEILIS 80
Query: 505 RFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
R +EK + S +DLE+LC+VA K W+VR DL+ LNYDGN + IA + AL HF+ P
Sbjct: 81 RMIEKSVRRSNALDLENLCLVAGSKCWSVRADLHFLNYDGNFIDASCIAVMTALLHFKKP 140
Query: 565 DVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFT--ECIQLDTAL 622
DV +GD I++ ++DP+P++ILH P+ +++ +N + + G + E I +DT L
Sbjct: 141 DVEVSGDDIVVFDTKQRDPVPLSILHIPLCVTFNFYNPNGDEENIKGESNGELIVVDTNL 200
Query: 623 ALSQDRQKLG 632
++R LG
Sbjct: 201 I--EERLSLG 208
>gi|85087002|ref|XP_957805.1| hypothetical protein NCU00334 [Neurospora crassa OR74A]
gi|28918900|gb|EAA28569.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 297
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++LA+ S + +P A RP +G+ I ELSPMA+P FE R T+T V+++R LEK +
Sbjct: 55 TKILAKASAEVTVPFADRPLDGIFTIATELSPMAAPHFEVNRPTETEVLLSRLLEKTVRR 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W+VRVD++VL++DGNL A +AAL HFR PD + +
Sbjct: 115 SGALDTESLCLVAGQKCWSVRVDVHVLSHDGNLTDAACFAVVAALRHFRKPDTSMENGVL 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGST 608
+++ AE++P+P+ LH P ++++ F G EG T
Sbjct: 175 TVYTPAEREPVPLGWLHSPFCVTWSFF--GEEGET 207
>gi|336469878|gb|EGO58040.1| hypothetical protein NEUTE1DRAFT_82175 [Neurospora tetrasperma FGSC
2508]
gi|350290437|gb|EGZ71651.1| ribosomal protein S5 domain 2-like protein [Neurospora tetrasperma
FGSC 2509]
Length = 297
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++LA+ S + +P A RP +G+ I ELSPMA+P FE R T+T V+++R LEK +
Sbjct: 55 TKILAKASAEVTVPFADRPLDGIFTIATELSPMAAPHFEVNRPTETEVLLSRLLEKTVRR 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W+VRVD++VL++DGNL A +AAL HFR PD + +
Sbjct: 115 SGALDTESLCLVAGQKCWSVRVDVHVLSHDGNLTDAACFAVVAALRHFRKPDTSMENGVL 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGST 608
+++ AE++P+P+ LH P ++++ F G EG T
Sbjct: 175 TVYTPAEREPVPLGWLHSPFCVTWSFF--GDEGET 207
>gi|406604497|emb|CCH44059.1| hypothetical protein BN7_3618 [Wickerhamomyces ciferrii]
Length = 304
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 98/148 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A++S +V P R EGL ++ E+SPMAS FE GRQ+D ++I R +EK +
Sbjct: 54 TRVVARISAEIVTPYEDRAFEGLFQVSTEISPMASAMFENGRQSDDELLITRTVEKAVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLESLC++A K W++R D++ L+ DG + IA +A L HFR D+T +G+QI
Sbjct: 114 SGALDLESLCIIAGSKCWSIRADVHFLDCDGGFIDASCIAVMAGLQHFRKNDITVSGEQI 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
I+H E+ P+ ++ILH P+ +++A +N
Sbjct: 174 IVHPVEERAPVELSILHVPICVTFAFYN 201
>gi|402086889|gb|EJT81787.1| exosome complex exonuclease RRP45 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 302
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 103/154 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +LA+ S + +P A RP +G+ I ELSPMASP FE R T+ V+++R LEK +
Sbjct: 54 TRILAKTSAEVTVPYADRPFDGIFNIVTELSPMASPAFEVNRPTEAEVLLSRLLEKTVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A K W+VRVDL+VL++DGNL+ +A + AL HFR PD + G+ +
Sbjct: 114 SGALDTESLCLIAGLKCWSVRVDLHVLSHDGNLVDASCLAVVTALRHFRKPDTSIEGEAL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGS 607
+++ AE++P+P++ LH P ++++ F S+ +
Sbjct: 174 TVYTPAEREPVPLSWLHSPFCVTFSFFGEASQSA 207
>gi|336258954|ref|XP_003344283.1| hypothetical protein SMAC_06484 [Sordaria macrospora k-hell]
gi|380091844|emb|CCC10573.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 297
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++LA+ S + +P A RP +G+ I ELSPMA+P FE R T+T V+++R LEK +
Sbjct: 55 TKILAKASAEVTVPFADRPLDGIFTIATELSPMAAPHFEVNRPTETEVLLSRLLEKTVRR 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W+VRVD++VL++DGNL A +AAL HFR PD + +
Sbjct: 115 SGALDTESLCLVAGQKCWSVRVDVHVLSHDGNLTDAACFAVVAALRHFRKPDTSMENGVL 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGST 608
+++ AE++P+P+ LH P ++++ F G EG T
Sbjct: 175 TVYTPAEREPVPLGWLHSPFCVTWSFF--GDEGET 207
>gi|322699612|gb|EFY91372.1| 3' exoribonuclease [Metarhizium acridum CQMa 102]
Length = 288
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 105/155 (67%), Gaps = 2/155 (1%)
Query: 455 EVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKES 514
+++A+VS + +P RP +G+ I++ELSPM +P FE R T+ V+++R LEK + S
Sbjct: 50 KIVAKVSAEVTVPFTDRPFDGIFSISSELSPMVAPSFEVNRPTEQEVLLSRILEKTIRRS 109
Query: 515 KCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQII 574
+D ESLC+VA +K W+VR D++VL++DGNLL A +AAL HFR P+ T G+ +
Sbjct: 110 GALDTESLCLVAGQKCWSVRADVHVLSHDGNLLDVACFAVVAALRHFRKPETTMEGETLT 169
Query: 575 IHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
I++ AE++P+ ++ LH P ++++ F G EG TV
Sbjct: 170 IYTPAEREPVALSWLHSPFCVTFSFF--GHEGETV 202
>gi|408397088|gb|EKJ76238.1| hypothetical protein FPSE_03493 [Fusarium pseudograminearum CS3096]
Length = 293
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+VS + +P RP +G+ I +ELSPM +P +E R + V+++R LEK +
Sbjct: 54 TRVLAKVSAEVTVPYTDRPFDGVFTITSELSPMVAPSYEVNRPSLEEVLLSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A +K W++RVDL+VL +DGNL +A +AAL HFR PD + G+ +
Sbjct: 114 SGALDTESLCLIAGKKCWSIRVDLHVLAHDGNLTDAACVAVIAALRHFRKPDSSIEGETL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
I+++AE++P+P++ LH P ++Y+ + G +GS V
Sbjct: 174 TIYTSAEREPVPLSWLHSPFCVTYSFY--GEDGSQV 207
>gi|391334104|ref|XP_003741448.1| PREDICTED: exosome complex component RRP45-like [Metaseiulus
occidentalis]
Length = 294
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLAQ S ++ PK TRPNEG L I ++SP+A+ + R + V I R L++ ++
Sbjct: 55 TKVLAQCSAHICEPKPTRPNEGRLAIQFDVSPVAA-SLQDSRTMEYRVGIGRLLDRVIRD 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+C+DLE+LC+VA E+ W VRVD+ ++N GN+ C SIA++AALAHF+ P+VT G ++
Sbjct: 114 SECVDLENLCLVAGERAWEVRVDVVLMNLGGNVAECASIASVAALAHFKRPEVTIVGKEM 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
+H E +P+P+ I HYP +S+A F
Sbjct: 174 TVHPVTEHEPVPLHIYHYPYCLSFAFF 200
>gi|330804424|ref|XP_003290195.1| hypothetical protein DICPUDRAFT_154682 [Dictyostelium purpureum]
gi|325079706|gb|EGC33294.1| hypothetical protein DICPUDRAFT_154682 [Dictyostelium purpureum]
Length = 303
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Query: 424 WTDVDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINA 481
+T +D S + SI E G++ V+ + V ++C++V PK RPNEG N
Sbjct: 20 YTRIDGRSITDMRSIKIEFGKSFGLVEVQLGKTRVYTSITCDIVEPKPERPNEGFYVFNT 79
Query: 482 ELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLN 541
++SPM+S + R + R +EK KES+ ID ESLC+++ KVW++++ +++L+
Sbjct: 80 DISPMSSVSVDPNRGNPLENELGRIIEKGLKESRAIDTESLCIISGSKVWSIKISIHILD 139
Query: 542 YDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
GNLL C SI+ +AAL HFR PDVT G++ IH E++P+P++I H P++I++ F
Sbjct: 140 DCGNLLDCASISVIAALLHFRKPDVTVIGNEATIHPIDEREPVPLSIHHTPISITFGFF 198
>gi|340515703|gb|EGR45955.1| predicted protein [Trichoderma reesei QM6a]
Length = 296
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 455 EVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKES 514
++LA+VS + +P A RP +G+ I +EL PM +P +E R T+T V++ R LEK + S
Sbjct: 58 QLLAKVSAEVTVPFADRPFDGIFQITSELGPMVAPSYEVNRPTETEVLLARLLEKTIRRS 117
Query: 515 KCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQII 574
+D ESLC+VA +K W+VRVDL+VL+ DGNL+ A +AAL HFR PD + G+ +
Sbjct: 118 GALDTESLCLVAGQKCWSVRVDLHVLSADGNLIDSACFAVVAALRHFRKPDTSIEGETLT 177
Query: 575 IHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
+++ AE++P+P++ LH P ++ F G EG V
Sbjct: 178 VYTPAEREPVPLSWLHSPFCATFDFF--GDEGDIV 210
>gi|46122263|ref|XP_385685.1| hypothetical protein FG05509.1 [Gibberella zeae PH-1]
Length = 293
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+VS + +P RP +G+ I +ELSPM +P +E R + V+++R LEK +
Sbjct: 54 TRVLAKVSAEVTVPYTDRPFDGVFTITSELSPMVAPSYEVNRPSLEEVLLSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A +K W++RVDL+VL +DGNL +A +AAL HFR PD + G+ +
Sbjct: 114 SGALDTESLCLIAGKKCWSIRVDLHVLAHDGNLTDAACVAVIAALRHFRKPDSSIEGETL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
I++ AE++P+P++ LH P ++Y+ + G +GS V
Sbjct: 174 TIYTPAEREPVPLSWLHSPFCVTYSFY--GEDGSQV 207
>gi|195567204|ref|XP_002107160.1| GD15722 [Drosophila simulans]
gi|194204561|gb|EDX18137.1| GD15722 [Drosophila simulans]
Length = 407
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +R+ + DV+ +W S++ G+ ++V+AQV C M +P +RPNEG
Sbjct: 31 DGRRSNESRDVELTFGTDWGSVAVSMGD---------TKVMAQVICEMGLPSLSRPNEGK 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L +N L +A S+ +N LE+ F+ SKCIDLESLCV AE+ VW +RV+
Sbjct: 82 LQLNVLLGGVAFLDEAYSTHDQRSLKLNSLLERTFRSSKCIDLESLCVAAEKHVWCIRVN 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NV+N+DGNL SIA LAAL HFR PDV+ ++ I + P+ HYPV+++
Sbjct: 142 VNVINHDGNLYDASSIATLAALMHFRRPDVSYKDGELRIFKQNGLEFTPLLFHHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y V+ + P E D+ + LS
Sbjct: 202 YCVYKSSGQPILDPTLLEENAADSVIVLS 230
>gi|255718091|ref|XP_002555326.1| KLTH0G06644p [Lachancea thermotolerans]
gi|238936710|emb|CAR24889.1| KLTH0G06644p [Lachancea thermotolerans CBS 6340]
Length = 305
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFK 512
++V ++SC + P RP EGL FI+ E SPMA PQFE G T + V+ +R +EK +
Sbjct: 54 TKVHCRISCTITQPYEDRPFEGLFFISTETSPMAGPQFENGNNTGEDEVLCSRIIEKAVR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W VR D++ LN DG + IA + L HF+ PDV+ +G+Q
Sbjct: 114 RSGALDVEGLCIVAGSKCWAVRADVHFLNCDGGFIDASCIAVMVGLLHFKKPDVSVSGEQ 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ IH E++P+P+ +LH P+ +S++ FN
Sbjct: 174 VTIHPVDEREPVPLGVLHVPICVSFSFFN 202
>gi|225710860|gb|ACO11276.1| Exosome complex exonuclease RRP45 [Caligus rogercresseyi]
Length = 364
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 12/215 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA SC++ P++ RPNEG+L + E P + T+T V +NR +E+ KE
Sbjct: 50 TRVLASTSCSVGEPRSVRPNEGILKTHIE------PLSKRSISTETLVELNRVIERVLKE 103
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+D+ESLC+ +EEKVW + +++ +LN GN C SIA LAAL HF+ PDVT GD+I
Sbjct: 104 SKCVDMESLCISSEEKVWIISLEMTLLNDAGNAADCASIAGLAALCHFKRPDVTLKGDKI 163
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQD--RQKL 631
IH E+DP+ + I H+PV ++A++ G P E I +D + L + R+
Sbjct: 164 RIHPFYERDPVSLAIHHHPVLSTFALY--GRVALLDPSKEEEIVMDGKVVLGMNPYREIC 221
Query: 632 GVDSAYANLVNKTDRILLDEGEKDSGETKVKVEKV 666
+ A LV+KT ++L K + E+K V+++
Sbjct: 222 ALHLAGQKLVDKT--LVLQLASKAAEESKRIVDQL 254
>gi|19075183|ref|NP_587683.1| exosome subunit Rrp45 (predicted) [Schizosaccharomyces pombe 972h-]
gi|21759396|sp|O74918.1|RRP45_SCHPO RecName: Full=Exosome complex component rrp45; AltName:
Full=Ribosomal RNA-processing protein 45
gi|3702641|emb|CAA21233.1| exosome subunit Rrp45 (predicted) [Schizosaccharomyces pombe]
Length = 291
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 100/150 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A+++ + P RP +G+ I EL+P+A FE GR +D ++I+R +EK +
Sbjct: 54 TRVMARITTEITKPYTDRPFDGIFSITTELTPLAYSAFEAGRVSDQEIVISRLIEKAVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+++ +K W+VR ++ +N+DGNL+ IA +AAL HFR P++T G+++
Sbjct: 114 SNALDTESLCIISGQKCWHVRASVHFINHDGNLVDAACIAVIAALCHFRRPELTVVGEEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+H E+ P+P++ILH P+ ++++ FN G
Sbjct: 174 TVHPVEERVPVPLSILHMPICVTFSFFNNG 203
>gi|367050304|ref|XP_003655531.1| hypothetical protein THITE_2170949 [Thielavia terrestris NRRL 8126]
gi|347002795|gb|AEO69195.1| hypothetical protein THITE_2170949 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 100/148 (67%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+ + + +P A RP +G+ I ELSPM SP FE R T+T V+++R LEK +
Sbjct: 54 TRVLAKATAEVTVPYADRPLDGIFTIATELSPMTSPAFEVNRPTETEVLLSRLLEKTVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W+VRVD++VL++DGNL+ +A +AAL HFR PD + +
Sbjct: 114 SGALDTESLCLVAGQKCWSVRVDVHVLSHDGNLIDASCLAVVAALRHFRKPDTSMDAGVL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
+++ AE++P+P++ LH P ++++ F
Sbjct: 174 TVYTPAEREPVPLSWLHSPFCVTWSFFG 201
>gi|150865099|ref|XP_001384176.2| hypothetical protein PICST_59559 [Scheffersomyces stipitis CBS
6054]
gi|149386355|gb|ABN66147.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 307
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 110/180 (61%), Gaps = 4/180 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++ +VS + P RP EGL IN E+S MA F+ + ++ ++I R +EK +
Sbjct: 55 TKLAVRVSAQIGKPYEDRPFEGLFQINCEISSMAWAHFDNSKNSNEEILIARIIEKAIRR 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT--STGD 571
S +DLE+LC++A EKVWN+ VDLN LN+DGN + A+ AL HF+ PD++ + G+
Sbjct: 115 SNSLDLEALCIIAGEKVWNITVDLNFLNFDGNFVDVGCFGAMLALHHFKKPDISIVNGGE 174
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGF--TECIQLDTALALSQDRQ 629
II+H E+ P+P++ILH P+ ++Y+ +N G++ S + G E LD L Q R+
Sbjct: 175 DIIVHDIDERQPVPLSILHVPICLTYSFYNPGNKESNLKGEDDDEIYLLDANLIEEQVRE 234
>gi|393215116|gb|EJD00608.1| hypothetical protein FOMMEDRAFT_112158 [Fomitiporia mediterranea
MF3/22]
Length = 282
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 98/148 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA V MV P RP EG++ I++E+SPMAS FE GR ++ V+I R LEK +
Sbjct: 53 TRVLAHVDAKMVKPPEERPLEGIITIHSEISPMASSDFEPGRPSEEEVLITRMLEKVLRR 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCV+A ++VW++R+ ++ L GN+L C +A + AL HFR P+V GD++
Sbjct: 113 SDAVDKESLCVLAGQRVWHLRLTIHFLADAGNMLDCACLAGMVALKHFRRPEVEVIGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
+HS E+ P+P+++ H P +++A F+
Sbjct: 173 TLHSPEERAPVPLSLHHTPFCLTFAYFD 200
>gi|366996108|ref|XP_003677817.1| hypothetical protein NCAS_0H01580 [Naumovozyma castellii CBS 4309]
gi|342303687|emb|CCC71468.1| hypothetical protein NCAS_0H01580 [Naumovozyma castellii CBS 4309]
Length = 303
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT-SVMINRFLEKCFK 512
+ V ++SC + P RP EGL I+ E SPMA PQFE G TD ++ R +EK +
Sbjct: 54 TRVHCRISCQISQPYEDRPFEGLFLISTENSPMAGPQFENGNNTDEDEILCARIIEKAVR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W VR D++ LN DG + IA +A L HF+ PD+T G+Q
Sbjct: 114 RSGALDIEGLCIVAGSKCWAVRADVHFLNCDGGFIDASCIAVMAGLIHFKKPDITVHGEQ 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+IIH E++P P+ ILH P+ ++++ FN
Sbjct: 174 VIIHPIEEREPTPLGILHIPICVTFSFFN 202
>gi|406868202|gb|EKD21239.1| exosome complex exonuclease [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 305
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 123/215 (57%), Gaps = 3/215 (1%)
Query: 418 SKRAQDWTDVDFMSSENWTSISAENGE--AVWCPWVKPSEVLAQVSCNMVIPKATRPNEG 475
+K + +D + + + ++ E GE V + + + +S + P T P +G
Sbjct: 16 AKALHENIRLDGRAFDQYRAVELEFGEELGVVDLSLGKTRIHTHISATITPPLPTHPTDG 75
Query: 476 LLFINAELSPMASPQFETG-RQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVR 534
L I ELSPM SP E+ R + +++R LEK + S +D ESLC++A KVW++R
Sbjct: 76 LFTITTELSPMLSPSIESSSRPSVNETLLSRLLEKTIRRSSALDTESLCLIAGSKVWHIR 135
Query: 535 VDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVT 594
D++VL++DGNL+ + +AAL HFR PDV + G+++I++S E++P+ +++LH+P+
Sbjct: 136 ADVHVLSHDGNLVDAACLGVIAALQHFRKPDVETKGEEVIVYSTREREPVKLSLLHFPLC 195
Query: 595 ISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQ 629
++++ + G G G E + LD L Q R+
Sbjct: 196 VTFSFYGEGILGKDGEGEKEKVLLDAGLLEEQLRE 230
>gi|196007548|ref|XP_002113640.1| hypothetical protein TRIADDRAFT_14906 [Trichoplax adhaerens]
gi|190584044|gb|EDV24114.1| hypothetical protein TRIADDRAFT_14906, partial [Trichoplax
adhaerens]
Length = 267
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S VLA +C ++ P TRP EG L N ELSPMASP + D + + R LE+CF E
Sbjct: 50 SRVLAVTTCELIRP-ITRPEEGRLLFNVELSPMASPLNHSNDVIDRRIALERRLEQCFVE 108
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S IDLESLCV+A EKVW +RV ++VL+ GN+L C SIAA+A+LAHFR P VT G+ +
Sbjct: 109 SAAIDLESLCVIAGEKVWFIRVAIHVLDDVGNILDCASIAAIASLAHFRRPQVTVVGEDV 168
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
IH+ EKD IP+ I H P+ I++A F+G + P E +++ L ++ +R +
Sbjct: 169 TIHNRNEKDYIPLNIHHMPLCITFAFFHGNGCMAIDPTDQEEAVMESKLVMALNRHR 225
>gi|24642649|ref|NP_573163.1| Rrp45 [Drosophila melanogaster]
gi|19527801|gb|AAL90015.1| AT07738p [Drosophila melanogaster]
gi|22832411|gb|AAF48665.2| Rrp45 [Drosophila melanogaster]
gi|220949552|gb|ACL87319.1| Rrp45-PA [synthetic construct]
gi|220958432|gb|ACL91759.1| Rrp45-PA [synthetic construct]
Length = 412
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 9/209 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +R+ + DV+ ++W S++ G+ ++VLAQV+C M P +RPNEG
Sbjct: 31 DGRRSNESRDVELTFGKDWGSVAVSMGD---------TKVLAQVTCEMGPPALSRPNEGK 81
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
+ +N L +A S+ +N LE+ F+ S+ IDLESLCV E+ VW +RV+
Sbjct: 82 IHLNVYLGGVAFLDEAHTTHDQRSLKLNSLLERTFRSSRSIDLESLCVAVEKHVWCIRVN 141
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NVLN+DGNL +IA LAAL HFR PDV ++ I E++ IP+ HYPV+++
Sbjct: 142 VNVLNHDGNLYDASTIATLAALMHFRRPDVWYKDGELRIFKKKEREFIPLLFHHYPVSVT 201
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALS 625
Y V+ + P E D+ + LS
Sbjct: 202 YCVYKSSVQPILDPTLLEENAADSVIVLS 230
>gi|402592869|gb|EJW86796.1| hypothetical protein WUBG_02293 [Wuchereria bancrofti]
Length = 393
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 99/150 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLAQVSC++V P TR N G + + ++SPMASP +E GR + + R LE +++
Sbjct: 53 TKVLAQVSCSLVEPSTTRGNMGTIEVQVDMSPMASPDYEDGRLNSKGLELMRILELLYRD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+DLESLC+ ++VW +R+D++VL DG+L+ C IA+ ALAHFR PDV+ D I
Sbjct: 113 CGVVDLESLCLRTFKQVWQIRIDVHVLASDGSLVDCACIASSTALAHFRRPDVSVLPDSI 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
IIHS EK PI + I H P+ +++ + + G
Sbjct: 173 IIHSNDEKIPISLNIYHMPICVTFGITSDG 202
>gi|328866220|gb|EGG14605.1| Putative exosome complex exonuclease RRP45 [Dictyostelium
fasciculatum]
Length = 469
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 9/184 (4%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +R D DV + + + + G + V VSC + P+ RPNEG
Sbjct: 24 DGRRLDDMRDVKISFGKEYGMVEVQLGR---------TRVYTSVSCEVAEPRPERPNEGF 74
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
N +S M++ + + GR + + R +E+ KES+ ID E+LC+VA +KVW + +
Sbjct: 75 FVFNTNISQMSNVEVDIGRSNPAELELGRLVERGLKESRAIDTEALCIVAGQKVWRIVTN 134
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+++L+ GNLL C SI+ + AL HFR PDVT G++ IH+ E++P+P++I HYPV+++
Sbjct: 135 IHILDDCGNLLDCASISVITALLHFRKPDVTLVGNEATIHTLEEREPVPLSIHHYPVSVT 194
Query: 597 YAVF 600
+ F
Sbjct: 195 FGFF 198
>gi|367002015|ref|XP_003685742.1| hypothetical protein TPHA_0E02160 [Tetrapisispora phaffii CBS 4417]
gi|357524041|emb|CCE63308.1| hypothetical protein TPHA_0E02160 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 97/149 (65%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFK 512
++V +VSC++ P RP EGL I+ E+SPMA PQFE G T D V+ +R +EK +
Sbjct: 54 TKVQCRVSCSITQPYEDRPFEGLFIISTEMSPMAGPQFENGSNTGDDEVLCSRIIEKAIR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W +R D++VL+ DG ++ +A + AL HFR PDV+ G+Q
Sbjct: 114 RSGALDVEGLCIVAGSKCWAIRADVHVLDCDGGIIDASCLAVICALLHFRKPDVSILGEQ 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ +H E++P+ + ILH P+ ++++ FN
Sbjct: 174 VTVHPINEREPVALGILHIPICVTFSFFN 202
>gi|395328492|gb|EJF60884.1| ribosomal protein S5 domain 2-like protein [Dichomitus squalens
LYAD-421 SS1]
Length = 281
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 99/147 (67%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQV MV P RP EG++ I++ELSPMAS ++E GR T+ V + R L+K +
Sbjct: 54 TRVLAQVDGKMVKPPPERPLEGIISIHSELSPMASNEYEPGRPTEEEVALTRMLDKVLRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCV+A ++VW++R+ ++VL+ GN++ C +A + AL HFR P+V GD+I
Sbjct: 114 SDAVDKESLCVLAGQRVWHIRLTIHVLSDAGNMVDCACLAGIVALKHFRRPEVEVEGDEI 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
+H +E+ P+P+++ H P ++A F
Sbjct: 174 TVHHPSERAPVPLSMHHTPFCFTFAFF 200
>gi|380479303|emb|CCF43100.1| 3' exoribonuclease [Colletotrichum higginsianum]
Length = 298
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 105/153 (68%), Gaps = 2/153 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +L +VS + +P A RP EG+ I +ELSPMASP FE R T+ V+++R LEK +
Sbjct: 54 TRILVKVSAEVTVPYADRPFEGIFQITSELSPMASPAFEINRPTEAEVLLSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +KVW+VR D++VL++DGNL +A +AAL HFR PD ++ G+ +
Sbjct: 114 SGALDTESLCLVAGQKVWSVRADVHVLSHDGNLTDAACLAVVAALRHFRKPDTSNEGESL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEG 606
I + AE++P+P++ LH P ++++ F G EG
Sbjct: 174 TIFTPAEREPVPLSWLHSPFCVTFSFF--GDEG 204
>gi|170109350|ref|XP_001885882.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639153|gb|EDR03426.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 282
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 95/147 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQV MV P RP +G + I++E+ PMAS ++E GR +D V I R L+K K
Sbjct: 53 TRVLAQVEAKMVKPAPERPFQGTITIHSEILPMASSEYEPGRPSDEEVTITRMLDKVLKR 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A ++VW++R+ L+ L GN+L C +A + AL HFR PDV GD++
Sbjct: 113 SDAVDKESLCILAGQRVWHIRLTLHFLADAGNMLDCACLAGITALQHFRRPDVEVVGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
I+HS ++ P+P+ I H P ++A F
Sbjct: 173 IVHSPWDRAPVPLAIHHTPFCFTFAFF 199
>gi|50290581|ref|XP_447723.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527034|emb|CAG60670.1| unnamed protein product [Candida glabrata]
Length = 303
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 107/186 (57%), Gaps = 10/186 (5%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ +R + DV + + ++ G+ + V ++SC + P RP EGL
Sbjct: 26 DGRRLDQFRDVQIEFGKEYGDVTVRMGKTL---------VQCRISCQITEPYEDRPFEGL 76
Query: 477 LFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRV 535
I+ E+SPMA PQFE G T + V+ R +EK + S +D+E LC+VA K W VR
Sbjct: 77 FVISTEISPMAGPQFENGNSTGEDEVLCARIIEKAVRRSGALDVEGLCIVAGSKCWAVRA 136
Query: 536 DLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTI 595
D++ LN DG + IA +AAL+HFR PD++ G+ ++++ E++P+P+ ILH P+ +
Sbjct: 137 DVHYLNCDGGFIDASCIAVMAALSHFRKPDISVHGEDVVVYPVDEREPVPLGILHIPICV 196
Query: 596 SYAVFN 601
+++ FN
Sbjct: 197 TFSFFN 202
>gi|254586253|ref|XP_002498694.1| ZYRO0G16412p [Zygosaccharomyces rouxii]
gi|238941588|emb|CAR29761.1| ZYRO0G16412p [Zygosaccharomyces rouxii]
Length = 306
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Query: 424 WTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAEL 483
+ DVD + + ++ G+ +++ ++SC + P RP EGL I+ E
Sbjct: 33 FRDVDIKFGKEYGDVTVTMGK---------TKIHCRISCQIAQPYEDRPFEGLFLISTET 83
Query: 484 SPMASPQFETGRQT-DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNY 542
SPMA PQFE G T + V+ R +EK + S +D+E LC+VA K W +R D++ L+
Sbjct: 84 SPMAGPQFENGNSTGEDEVLCVRIIEKAVRRSGALDVEGLCIVAGSKCWAIRADVHFLDC 143
Query: 543 DGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
DG LL IA + AL HF+ PD+T GD++ +H E++P+P+ ILH P+ ++++ FN
Sbjct: 144 DGGLLDASCIAVMTALLHFKKPDITVLGDRVTVHPTDEREPVPLGILHIPICVTFSFFN 202
>gi|403413602|emb|CCM00302.1| predicted protein [Fibroporia radiculosa]
Length = 283
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+AQV MV P RP EG++ I++ELSPMAS ++E GR +D V I R L+K +
Sbjct: 54 TRVMAQVDARMVKPPPERPLEGIITIHSELSPMASNEYEVGRPSDEEVTITRMLDKVLRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCV+A ++VW++R+ ++ L GN+L C +A + AL HFR P+V GD++
Sbjct: 114 SDVVDKESLCVLAGQRVWHIRLTIHCLADAGNMLDCACLAGIVALKHFRRPEVEVVGDEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVP 610
+H E+ P+P+++ H P +++A F + ST+P
Sbjct: 174 TVHHPLERAPMPLSMHHTPFCLTFAYF---PDPSTLP 207
>gi|179287|gb|AAA58384.1| autoantigen [Homo sapiens]
gi|63992811|gb|AAY40968.1| unknown [Homo sapiens]
Length = 355
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 101/145 (69%)
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
MA+P FE GRQ+D V +NR +E+C + SKCID ESLCVVA EKVW +RVDL++LN+DGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 61 IIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTY 120
Query: 606 GSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 121 LLVDPNEREERVMDGLLVIAMNKHR 145
>gi|389739495|gb|EIM80688.1| ribosomal protein S5 domain 2-like protein [Stereum hirsutum
FP-91666 SS1]
Length = 286
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 98/155 (63%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQV M+ P RP EG + I++E+SPMAS ++E GR +D V ++R L+K +
Sbjct: 53 TRVLAQVDAKMIRPTPERPYEGQILIHSEISPMASSEYEPGRPSDEEVALSRMLDKVLRR 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D E LC++A ++VW +R+ ++ L GNLL C +A +AAL HFR P+V GD++
Sbjct: 113 SDAVDKEGLCILAGQRVWQLRITIHCLADAGNLLDCACLAGIAALKHFRRPEVEVVGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGST 608
+H + + P+P+++ H P I++A F S T
Sbjct: 173 TVHPPSSRAPVPLSLHHTPFCITFAYFPSPSHPHT 207
>gi|392559741|gb|EIW52925.1| ribosomal protein S5 domain 2-like protein [Trametes versicolor
FP-101664 SS1]
Length = 283
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 98/148 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQV MV P RP EG++ I++ELS MAS +FE GR +D V I R L+K +
Sbjct: 54 TRVLAQVDGKMVKPLPERPLEGIITIHSELSSMASNEFEPGRPSDQEVTITRMLDKVLRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCV+A ++VW++R+ ++VL+ GN+L C +A + AL HFR P+V GD++
Sbjct: 114 SDAVDKESLCVLAGQRVWHIRLTIHVLSDAGNMLDCACLAGIVALKHFRRPEVEVQGDEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
IH +E+ P+P+ + H P ++A F+
Sbjct: 174 TIHHPSERAPVPLALHHAPFCFTFAFFS 201
>gi|497643|gb|AAA18832.1| PM-Scl-75 autoantigen [Homo sapiens]
Length = 372
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 101/145 (69%)
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
MA+P FE GRQ+D V +NR +E+C + SKCID ESLCVVA EKVW +RVDL++LN+DGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
++ SIAA+ AL HFR PDV+ GD++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 61 IIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTY 120
Query: 606 GSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 121 LLVDPNEREERVMDGLLVIAMNKHR 145
>gi|149048738|gb|EDM01279.1| exosome component 9, isoform CRA_a [Rattus norvegicus]
Length = 353
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 101/145 (69%)
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
++ SIAA+ AL HFR PDV+ G+++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 61 IIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTY 120
Query: 606 GSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 121 LLVDPNEREERVMDGLLVIAMNKHR 145
>gi|365766354|gb|EHN07852.1| Rrp45p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 305
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 12/213 (5%)
Query: 390 MRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCP 449
M +++ A + + Q + + + + DV+ + + +S + G
Sbjct: 1 MAKDIEISASESKFILEALRQNYRL--DGRSFDQFRDVEITFGKEFGDVSVKMGN----- 53
Query: 450 WVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLE 508
++V ++SC + P RP EGL I+ E+SPMA QFE G T + V+ +R +E
Sbjct: 54 ----TKVHCRISCQIAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIE 109
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K + S +D+E LC+VA K W VR D++ L+ DG + IA +A L HF+ PD+T
Sbjct: 110 KSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITV 169
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
G+QII+H E++P+P+ ILH P+ ++++ FN
Sbjct: 170 XGEQIIVHPVNEREPVPLGILHIPICVTFSFFN 202
>gi|170084377|ref|XP_001873412.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650964|gb|EDR15204.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 284
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 2/149 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGR--QTDTSVMINRFLEKCF 511
+ VLAQV MV P RP EG + I++E+SPMAS ++E GR +D V I R L+K
Sbjct: 53 TRVLAQVEAKMVKPAPERPFEGTITIHSEISPMASSEYEPGRGRPSDEEVAITRMLDKVL 112
Query: 512 KESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
K S +D ESLC++A ++VW++R+ L+ L GN+L C +A + AL HFR PDV GD
Sbjct: 113 KRSDAVDKESLCILAGQRVWHIRLTLHFLADAGNMLDCACLAGITALRHFRRPDVEVVGD 172
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISYAVF 600
++I+HS ++ P+P+ I H P ++A F
Sbjct: 173 EVIVHSPLDRAPVPLAIHHTPFCFTFAFF 201
>gi|449303023|gb|EMC99031.1| hypothetical protein BAUCODRAFT_146018 [Baudoinia compniacensis
UAMH 10762]
Length = 295
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ + VL VSC +V P R +G+ I+ EL PMASP FE GR T ++I+R LEK
Sbjct: 54 IGKTRVLCNVSCEVVTPYPDRKFDGVFTISCELGPMASPAFEVGRPDQTEMLISRILEKT 113
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG 570
+ S +D ESLC+VA +K ++VR D++VL++DGNLL IA +AAL HFR PD G
Sbjct: 114 IRRSGALDTESLCIVAGQKCFHVRADIHVLDHDGNLLDAACIALMAALLHFRRPDFEVHG 173
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ + + S E++P+ +T+ H+P I+ + ++ G
Sbjct: 174 EDVTVFSVREREPVKLTVQHHPFCITTSYYDSG 206
>gi|389632461|ref|XP_003713883.1| exosome complex exonuclease RRP45 [Magnaporthe oryzae 70-15]
gi|351646216|gb|EHA54076.1| exosome complex exonuclease RRP45 [Magnaporthe oryzae 70-15]
Length = 293
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 100/148 (67%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++A+ S + IP RP +G+ I ELSPMASP FE R T+T V+++R LEK +
Sbjct: 54 TRIVAKASAEVTIPYTDRPFDGIFNIVTELSPMASPAFEVNRPTETEVLLSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W++RVD++ ++DGNL+ +A +AAL HFR PD + G+ +
Sbjct: 114 SNALDTESLCLVAGQKCWSIRVDVHAESHDGNLIDASCLAVVAALRHFRKPDTSIEGEVV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
+++ AE++P+P++ LH P ++++ F
Sbjct: 174 TVYTPAEREPVPLSWLHSPFCVTFSFFG 201
>gi|410083339|ref|XP_003959247.1| hypothetical protein KAFR_0J00440 [Kazachstania africana CBS 2517]
gi|372465838|emb|CCF60112.1| hypothetical protein KAFR_0J00440 [Kazachstania africana CBS 2517]
Length = 306
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT-SVMINRFLEKCFK 512
++V ++SC + P RP EGL I+ E +PMA PQFE G T V+I+R +EK +
Sbjct: 54 TKVHVRISCQVTQPYEDRPFEGLFLISTESTPMAGPQFENGTNTSGDEVLISRIIEKAIR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W VR +++ LN DG + IA +A L HF+ PD+T G++
Sbjct: 114 RSGALDVEGLCIVAGSKCWAVRANVHFLNCDGGFIDASCIAVIAGLMHFKKPDITVHGEK 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+I+H E++P+P+ ILH P+ ++++ FN
Sbjct: 174 VIVHPLDEREPVPLGILHIPICVTFSFFN 202
>gi|365761400|gb|EHN03058.1| Rrp45p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401838753|gb|EJT42221.1| RRP45-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 305
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 10/190 (5%)
Query: 413 HFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
H+ + + + DV + + +S E G ++V ++SC + P RP
Sbjct: 22 HYRLDGRSFDQFRDVKITFGKEFGDVSVEMGN---------TKVHCRISCQIAQPYEDRP 72
Query: 473 NEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
EGL I+ E+SPMA QFE G T + V+ +R +EK + S +D+E LC+VA K W
Sbjct: 73 FEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIEKSVRRSGALDVEGLCIVAGSKCW 132
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
VR D++ L+ DG + IA + L HF+ PD+T G+QII+H E++P+P+ ILH
Sbjct: 133 AVRADVHFLDCDGGFIDASCIAVITGLMHFKKPDITVHGEQIIVHPINEREPVPLGILHI 192
Query: 592 PVTISYAVFN 601
P+ ++++ FN
Sbjct: 193 PICVTFSFFN 202
>gi|440473323|gb|ELQ42126.1| exosome complex exonuclease RRP45 [Magnaporthe oryzae Y34]
gi|440486517|gb|ELQ66377.1| exosome complex exonuclease RRP45 [Magnaporthe oryzae P131]
Length = 251
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 100/148 (67%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++A+ S + IP RP +G+ I ELSPMASP FE R T+T V+++R LEK +
Sbjct: 54 TRIVAKASAEVTIPYTDRPFDGIFNIVTELSPMASPAFEVNRPTETEVLLSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W++RVD++ ++DGNL+ +A +AAL HFR PD + G+ +
Sbjct: 114 SNALDTESLCLVAGQKCWSIRVDVHAESHDGNLIDASCLAVVAALRHFRKPDTSIEGEVV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
+++ AE++P+P++ LH P ++++ F
Sbjct: 174 TVYTPAEREPVPLSWLHSPFCVTFSFFG 201
>gi|448522633|ref|XP_003868739.1| hypothetical protein CORT_0C04610 [Candida orthopsilosis Co 90-125]
gi|380353079|emb|CCG25835.1| hypothetical protein CORT_0C04610 [Candida orthopsilosis]
Length = 329
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 446 VWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGR-QTDTSVMIN 504
V W K +++ +V+ +V P RP EG+ IN+E+SP AS +F+T R Q +++
Sbjct: 51 VEVSWGK-TKLSVRVTAQIVKPYPDRPFEGIFTINSEISPQASLKFDTTRAQQQDETLVS 109
Query: 505 RFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
R LEK + S +DLESLC++A +KVW + VDLN NYDGNL+ A + +L HFR P
Sbjct: 110 RILEKAIRRSNAVDLESLCIIAGDKVWELVVDLNFWNYDGNLIDVGCFATMLSLLHFRKP 169
Query: 565 DVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
D++ GD+I++H E+ P+ ++ILH P+ ++++ +N S+
Sbjct: 170 DISINGDEIVVHDENERQPVSLSILHVPICLTFSFYNLSSQ 210
>gi|313870783|gb|ADR82276.1| exosome complex exonuclease [Blumeria graminis f. sp. tritici]
Length = 303
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 103/155 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ + A VS + P RP EGL I ELSPM E GR + ++++R LEK +
Sbjct: 54 TRIHAHVSAEVTQPYPDRPYEGLFTIVTELSPMTHAHLEPGRNSPLEMLVSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A + W++RVD++VL+ +GNL+ SIA +AALAHF+ P+ + G ++
Sbjct: 114 SGALDPESLCLLAGQTCWSIRVDVHVLSVEGNLIDAASIAVIAALAHFKRPETNTVGGEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGST 608
+++ AE++P+P+++LH+P+ I+++ + SEG++
Sbjct: 174 TLYTLAEREPVPLSLLHWPLCITFSFYKDHSEGAS 208
>gi|451850324|gb|EMD63626.1| hypothetical protein COCSADRAFT_26966 [Cochliobolus sativus ND90Pr]
Length = 291
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 11/176 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A++S ++ P R +G+ I E SPMASP FE GR TD V+++R LEK +
Sbjct: 54 TRVIARISVDVTTPPPERKFDGIFQIVTEFSPMASPAFEVGRPTDAEVILSRILEKAIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A K + +R D++++++DG L+ IA +AAL HFR PDV G++
Sbjct: 114 SNALDTESLCIIAGLKCFALRADVHIVDHDGGLIDASCIAVMAALQHFRRPDVVVEGEKA 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQ 629
I S E++PIP++ILH P+ ++++ F G E +D LA Q RQ
Sbjct: 174 TILSVREREPIPLSILHQPLCVTFSCFEG-----------EIFLVDANLAEEQVRQ 218
>gi|6320486|ref|NP_010566.1| Rrp45p [Saccharomyces cerevisiae S288c]
gi|14285753|sp|Q05636.1|RRP45_YEAST RecName: Full=Exosome complex component RRP45; AltName:
Full=Ribosomal RNA-processing protein 45
gi|266618484|pdb|2WP8|A Chain A, Yeast Rrp44 Nuclease
gi|1230649|gb|AAB64446.1| Ydr280wp [Saccharomyces cerevisiae]
gi|45269387|gb|AAS56074.1| YDR280W [Saccharomyces cerevisiae]
gi|151942253|gb|EDN60609.1| 3'-5'-exoribonuclease [Saccharomyces cerevisiae YJM789]
gi|190404776|gb|EDV08043.1| 3'->5' exoribonuclease [Saccharomyces cerevisiae RM11-1a]
gi|256270394|gb|EEU05592.1| Rrp45p [Saccharomyces cerevisiae JAY291]
gi|259145518|emb|CAY78782.1| Rrp45p [Saccharomyces cerevisiae EC1118]
gi|285811296|tpg|DAA12120.1| TPA: Rrp45p [Saccharomyces cerevisiae S288c]
gi|323309622|gb|EGA62830.1| Rrp45p [Saccharomyces cerevisiae FostersO]
gi|323349166|gb|EGA83396.1| Rrp45p [Saccharomyces cerevisiae Lalvin QA23]
gi|349577332|dbj|GAA22501.1| K7_Rrp45p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300393|gb|EIW11484.1| Rrp45p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 305
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 12/213 (5%)
Query: 390 MRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCP 449
M +++ A + + Q + + + + DV+ + + +S + G
Sbjct: 1 MAKDIEISASESKFILEALRQNYRL--DGRSFDQFRDVEITFGKEFGDVSVKMGN----- 53
Query: 450 WVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLE 508
++V ++SC + P RP EGL I+ E+SPMA QFE G T + V+ +R +E
Sbjct: 54 ----TKVHCRISCQIAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIE 109
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K + S +D+E LC+VA K W VR D++ L+ DG + IA +A L HF+ PD+T
Sbjct: 110 KSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITV 169
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
G+QII+H E++P+P+ ILH P+ ++++ FN
Sbjct: 170 HGEQIIVHPVNEREPVPLGILHIPICVTFSFFN 202
>gi|312080640|ref|XP_003142686.1| hypothetical protein LOAG_07104 [Loa loa]
gi|307762153|gb|EFO21387.1| hypothetical protein LOAG_07104 [Loa loa]
Length = 521
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLAQVSC++V P R N G + ++ ++SPMASP +E GR + + R LE ++
Sbjct: 181 TKVLAQVSCSLVEPSTVRGNMGTVEVHVDMSPMASPDYEDGRLGSKGLELMRILELLYRN 240
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S IDLESLC+ ++VW +R+D++VL DG+L+ C IA+L ALAHFR PDV+ D I
Sbjct: 241 SGVIDLESLCLRTFKQVWQIRIDVHVLASDGSLVDCACIASLTALAHFRRPDVSVLPDSI 300
Query: 574 II--HSAAEKDPIPMTILHYPVTISYAVFNGG 603
II H EK PI + I H PV I++ + + G
Sbjct: 301 IIASHGNDEKMPISLNIYHMPVCITFGITSDG 332
>gi|323338208|gb|EGA79441.1| Rrp45p [Saccharomyces cerevisiae Vin13]
Length = 305
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 12/213 (5%)
Query: 390 MRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCP 449
M +++ A + + Q + + + + DV+ + + +S + G
Sbjct: 1 MAKDIEISASESKFILEALRQNYRL--DGRSFDQFRDVEITFGKXFGDVSVKMGN----- 53
Query: 450 WVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLE 508
++V ++SC + P RP EGL I+ E+SPMA QFE G T + V+ +R +E
Sbjct: 54 ----TKVHCRISCQIAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIE 109
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K + S +D+E LC+VA K W VR D++ L+ DG + IA +A L HF+ PD+T
Sbjct: 110 KSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITV 169
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
G+QII+H E++P+P+ ILH P+ ++++ FN
Sbjct: 170 HGEQIIVHPVNEREPVPLGILHIPICVTFSFFN 202
>gi|148703132|gb|EDL35079.1| exosome component 9, isoform CRA_b [Mus musculus]
Length = 353
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 101/145 (69%)
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
MA+P FE GRQ+D V +NR LE+C + SKCID ESLCVVA EKVW +RVDL++LN+DGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
++ SIAA+ AL HFR PDV+ G+++ +++ E+DP+P++I H P+ +S+A F G+
Sbjct: 61 IIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTY 120
Query: 606 GSTVPGFTECIQLDTALALSQDRQK 630
P E +D L ++ ++ +
Sbjct: 121 LLVDPNEREERVMDGLLVIAMNKHR 145
>gi|198419225|ref|XP_002123693.1| PREDICTED: similar to Exosome component 9 [Ciona intestinalis]
Length = 385
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 108/177 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+AQV+ + P+ +R +EG L + E+S MA+P + + D+ + + LE+
Sbjct: 55 TKVMAQVAAELCRPRESRQSEGSLGVQVEMSMMAAPHLDPAKPGDSGAELQQMLERSIVM 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +DLE LCV EK WN+++ ++VL++DGNLL C +IA++ +L HF+ PDV+ G ++
Sbjct: 115 SQAVDLEELCVRVGEKSWNIQIFVHVLSHDGNLLDCATIASMTSLKHFKRPDVSVVGQEV 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
IH +K PIP+T+ H P +S+A F GG P E +D L ++ ++ K
Sbjct: 175 TIHKFEDKHPIPLTLHHVPFCVSFAFFQGGGLMVVDPTLNEEKVMDGKLMVAVNKHK 231
>gi|409075918|gb|EKM76293.1| hypothetical protein AGABI1DRAFT_122693 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 283
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 95/146 (65%), Gaps = 1/146 (0%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ-TDTSVMINRFLEKCFKES 514
V+AQV MV P RP EG + I++E+SPMAS ++E GR ++ VMINR L+K + S
Sbjct: 55 VIAQVDAKMVKPTPERPFEGSISIHSEISPMASSEYEAGRAASEEEVMINRMLDKVLRRS 114
Query: 515 KCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQII 574
ID ESLC++A +VW++R+ + L+ GN+L C +A + AL HFR P+V GD++I
Sbjct: 115 DAIDKESLCILAGHRVWHLRITFHFLSDAGNMLDCACLAGIVALRHFRRPEVEVIGDEVI 174
Query: 575 IHSAAEKDPIPMTILHYPVTISYAVF 600
+H E+ P+P+ I H P ++A F
Sbjct: 175 VHPPTERAPVPLAIHHTPFCFTFAFF 200
>gi|448262633|pdb|4IFD|A Chain A, Crystal Structure Of An 11-subunit Eukaryotic Exosome
Complex Bound To Rna
Length = 304
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Query: 424 WTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAEL 483
+ DV+ + + +S + G ++V ++SC + P RP EGL I+ E+
Sbjct: 32 FRDVEITFGKEFGDVSVKMGN---------TKVHCRISCQIAQPYEDRPFEGLFVISTEI 82
Query: 484 SPMASPQFETGRQT-DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNY 542
SPMA QFE G T + V+ +R +EK + S +D+E LC+VA K W VR D++ L+
Sbjct: 83 SPMAGSQFENGNITGEDEVLCSRIIEKSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDC 142
Query: 543 DGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
DG + IA +A L HF+ PD+T G+QII+H E++P+P+ ILH P+ ++++ FN
Sbjct: 143 DGGFIDASCIAVMAGLMHFKKPDITVHGEQIIVHPVNEREPVPLGILHIPICVTFSFFN 201
>gi|426192955|gb|EKV42890.1| hypothetical protein AGABI2DRAFT_228615 [Agaricus bisporus var.
bisporus H97]
Length = 283
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 95/146 (65%), Gaps = 1/146 (0%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ-TDTSVMINRFLEKCFKES 514
V+AQV MV P RP EG + I++E+SPMAS ++E GR ++ VMINR L+K + S
Sbjct: 55 VIAQVDAKMVKPTPERPFEGSISIHSEISPMASSEYEAGRAASEEEVMINRMLDKVLRRS 114
Query: 515 KCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQII 574
ID ESLC++A +VW++R+ + L+ GN+L C +A + AL HFR P+V GD++I
Sbjct: 115 DAIDKESLCILAGHRVWHLRITFHFLSDAGNMLDCACLAGIVALRHFRRPEVEVIGDEVI 174
Query: 575 IHSAAEKDPIPMTILHYPVTISYAVF 600
+H E+ P+P+ I H P ++A F
Sbjct: 175 VHPPTERAPVPLAIHHTPFCFTFAFF 200
>gi|169621181|ref|XP_001804001.1| hypothetical protein SNOG_13798 [Phaeosphaeria nodorum SN15]
gi|160704198|gb|EAT78822.2| hypothetical protein SNOG_13798 [Phaeosphaeria nodorum SN15]
Length = 292
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 10/176 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A++S ++ P R +G+ I E SPMASP FE GR TD V+++R LEK +
Sbjct: 54 TRVVARISIDVTTPLPERKFDGVFQIVTEFSPMASPAFEIGRPTDAEVILSRILEKAIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A K + +R D++V+++DG L+ IA +AAL HFR PDV G++
Sbjct: 114 SNALDTESLCIIAGLKCFALRADVHVIDHDGGLIDASCIAVMAALQHFRRPDVLVEGEKA 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQ 629
+ S E+DPIP++ILH P+ ++++ F G E +D LA Q RQ
Sbjct: 174 TVLSVRERDPIPLSILHQPLCVTFSYFAEG----------ELFLVDANLAEEQVRQ 219
>gi|207346511|gb|EDZ72988.1| YDR280Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 212
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 12/213 (5%)
Query: 390 MRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCP 449
M +++ A + + Q + + + + DV+ + + +S + G
Sbjct: 1 MAKDIEISASESKFILEALRQNYRL--DGRSFDQFRDVEITFGKEFGDVSVKMGN----- 53
Query: 450 WVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLE 508
++V ++SC + P RP EGL I+ E+SPMA QFE G T + V+ +R +E
Sbjct: 54 ----TKVHCRISCQIAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIE 109
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K + S +D+E LC+VA K W VR D++ L+ DG + IA +A L HF+ PD+T
Sbjct: 110 KSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITV 169
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
G+QII+H E++P+P+ ILH P+ ++++ FN
Sbjct: 170 HGEQIIVHPVNEREPVPLGILHIPICVTFSFFN 202
>gi|281207355|gb|EFA81538.1| Putative exosome complex exonuclease [Polysphondylium pallidum
PN500]
Length = 470
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 92/147 (62%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V V+C + PK RPNEG N ++SPM+S ++ R + R +E+ KE
Sbjct: 52 TRVYTTVTCEVTEPKPERPNEGFFIFNTDVSPMSSVSVDSSRGNPVEAELGRLIERGLKE 111
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ ID E+LC+VA KVW V+ +++VL+ GNLL C SI+ + AL HFR PDVT G+
Sbjct: 112 SRAIDTEALCIVAGSKVWKVKTNVHVLDDCGNLLDCASISVITALLHFRKPDVTVVGNDA 171
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
IH E++P+P++I H P++I++ F
Sbjct: 172 TIHPIDEREPVPLSIHHTPISITFGFF 198
>gi|225713980|gb|ACO12836.1| Exosome complex exonuclease RRP45 [Lepeophtheirus salmonis]
Length = 363
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 125/215 (58%), Gaps = 12/215 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA SC++ P+++RPNEG+L I E P + T+ V +NR +E+ K+
Sbjct: 50 TRVLASTSCSVGEPQSSRPNEGVLKIRME------PLAKRSMTTEALVELNRVIERVLKQ 103
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+D+ESLC+ +EEKVW + +++ +LN GN C S+A LAAL HF+ PDVT GD+I
Sbjct: 104 SKCLDMESLCISSEEKVWIISLEMTILNDAGNAADCASVAGLAALCHFKRPDVTLKGDKI 163
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQD--RQKL 631
IH E+DP+ + + H+PV ++A++ G + P E + +D + L + R+
Sbjct: 164 RIHPFYERDPVSLAVHHHPVLSTFALY--GRVALSDPSRDEEVVMDGKVVLGMNPYREIC 221
Query: 632 GVDSAYANLVNKTDRILLDEGEKDSGETKVKVEKV 666
+ A LV+K R++L K + K V K+
Sbjct: 222 ALHLAGQKLVDK--RLVLQLASKAAEYAKNIVNKL 254
>gi|119593781|gb|EAW73375.1| chromosome 22 open reading frame 9, isoform CRA_b [Homo sapiens]
Length = 256
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 88/115 (76%), Gaps = 3/115 (2%)
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MD+KGE +++YP + F +D+F EVF D+ V +GEMVCVELVASD+ + + VIF GSIR
Sbjct: 1 MDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTFQGVIFQGSIR 60
Query: 247 YDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
Y+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV++
Sbjct: 61 YEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 112
>gi|403214419|emb|CCK68920.1| hypothetical protein KNAG_0B04860 [Kazachstania naganishii CBS
8797]
Length = 307
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFK 512
++V ++SC + +P RP EGL I+ E +PMA QFE G T + V+I R +EK +
Sbjct: 54 TKVHCRISCEVTLPYEDRPFEGLFLISTEFTPMAGGQFENGNSTGEDEVLIARIIEKAVR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W +R D++ L+ DG + IA +AAL HF+ PD+T G
Sbjct: 114 RSGALDVEGLCIVAGSKCWAIRADVHFLDCDGGFIDASCIAVMAALMHFKKPDITVQGHS 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+++H E++P+P+ ILH P+ ++++ FN
Sbjct: 174 VVVHPVEEREPVPLGILHVPICVTFSFFN 202
>gi|336369000|gb|EGN97342.1| hypothetical protein SERLA73DRAFT_169702 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381784|gb|EGO22935.1| hypothetical protein SERLADRAFT_450637 [Serpula lacrymans var.
lacrymans S7.9]
Length = 282
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 97/147 (65%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+AQV MV P RP EG++ I++E+SPMAS ++E GR ++ V+I R L+K +
Sbjct: 53 TRVIAQVDGKMVKPLPERPFEGMITIHSEISPMASSEYEPGRPSEEEVIITRMLDKVIRR 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCV+A ++VW++R+ ++ L GN+L C +A + AL HFR P+V GD++
Sbjct: 113 SDAVDKESLCVLAGQRVWHLRLTIHCLADAGNMLDCACLAGIVALKHFRRPEVEVIGDEV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
IH+ E+ PIP+ I H P ++A F
Sbjct: 173 TIHAPTERAPIPLAIHHTPYCFTFAFF 199
>gi|452000347|gb|EMD92808.1| hypothetical protein COCHEDRAFT_1020759 [Cochliobolus
heterostrophus C5]
Length = 291
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A++S ++ P R +G+ I E SPMASP FE GR TD V+++R LEK +
Sbjct: 54 TRVIARISVDVTTPPPERKFDGIFQIVTEFSPMASPAFEVGRPTDAEVILSRILEKAIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A K + +R D++++++DG L+ IA +AAL HFR PDV G++
Sbjct: 114 SNALDTESLCIIAGLKCFALRADVHIVDHDGGLIDASCIAVMAALQHFRRPDVVVEGEKA 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQ 629
I S E +PIP++ILH P+ ++++ F G E +D LA Q RQ
Sbjct: 174 TILSVREHEPIPLSILHQPLCVTFSYFEG-----------ELFLVDANLAEEQVRQ 218
>gi|396479694|ref|XP_003840816.1| similar to exosome complex endonuclease 2/ribosomal RNA processing
protein [Leptosphaeria maculans JN3]
gi|312217389|emb|CBX97337.1| similar to exosome complex endonuclease 2/ribosomal RNA processing
protein [Leptosphaeria maculans JN3]
Length = 291
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 111/187 (59%)
Query: 414 FWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPN 473
F K++ R Q D + ++ + V + + V+A++S ++ P R
Sbjct: 14 FIKQALREQIRLDKRAFDAFRPVELTFGDEYGVADVQLGKTRVIARISVDVTTPLPERKF 73
Query: 474 EGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNV 533
+G+ I +E SPMASP FE GR TD V+++R LEK + S +D ESLC++A K + +
Sbjct: 74 DGIFQIVSEFSPMASPAFEIGRPTDAEVILSRILEKAIRRSNALDTESLCIIAGLKCFAL 133
Query: 534 RVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPV 593
R D++V+++DG L+ IA +AAL HFR PDV G++ + S E+DPIP++ILH P+
Sbjct: 134 RADVHVIDHDGGLIDASCIAVMAALQHFRRPDVVVEGEKATVLSVRERDPIPLSILHQPL 193
Query: 594 TISYAVF 600
++++ F
Sbjct: 194 CVTFSYF 200
>gi|453085196|gb|EMF13239.1| exoribonuclease [Mycosphaerella populorum SO2202]
Length = 299
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 101/153 (66%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ + VL +S +V+P R +G+ I+ ELSP+ASP FE GRQ T ++++R LEK
Sbjct: 51 IGKTRVLVNISAEVVVPYVDRKFDGVFTISTELSPIASPAFEVGRQDQTEIILSRILEKT 110
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG 570
+ S +D ESLC+VA +K +++R D++VL++DGNL+ +A +AAL HFR PDV G
Sbjct: 111 IRRSGALDTESLCIVAGQKCFHIRADIHVLDHDGNLVDASCLALVAALMHFRRPDVEVHG 170
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+++ + S E++P+ +++ H P ++ + + GG
Sbjct: 171 EEVTVFSVREREPVRLSMQHQPFCVTMSYYEGG 203
>gi|225718348|gb|ACO15020.1| Exosome complex exonuclease RRP45 [Caligus clemensi]
Length = 366
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 122/224 (54%), Gaps = 34/224 (15%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA SC++ P++ RPNEG+L + E P + T+ V +NR +E+ KE
Sbjct: 50 TRVLASTSCSVGEPRSVRPNEGILKTHIE------PLSKRSMTTEALVELNRVIERVLKE 103
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKC+D+ESLC+ +EEKVW + +++ +L+ GN C SIA LAAL HF+ PDVT GD+I
Sbjct: 104 SKCVDMESLCISSEEKVWIISLEMTLLSDAGNAADCASIAGLAALCHFKRPDVTLKGDKI 163
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS------------EGSTVPGFTECIQLDTA 621
IH +DP+P+ I H+PV ++A++ S +G VPG ++
Sbjct: 164 RIHPFYGRDPVPLAIHHHPVLSTFALYGRVSLLDPSREEEAVMDGKVVPGMNPYREI--- 220
Query: 622 LALSQDRQKLGVDSAYA------------NLVNKTDRILLDEGE 653
AL QKL VD A N+VN+ ILL + +
Sbjct: 221 CALHLAGQKL-VDKALVLQLASKAAEEAKNIVNQLKNILLRDAQ 263
>gi|323334135|gb|EGA75519.1| Rrp45p [Saccharomyces cerevisiae AWRI796]
Length = 255
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFK 512
++V ++SC + P RP EGL I+ E+SPMA QFE G T + V+ +R +EK +
Sbjct: 4 TKVHCRISCQIAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIEKSVR 63
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W VR D++ L+ DG + IA +A L HF+ PD+T G+Q
Sbjct: 64 RSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITVHGEQ 123
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
II+H E++P+P+ ILH P+ ++++ FN
Sbjct: 124 IIVHPVNEREPVPLGILHIPICVTFSFFN 152
>gi|66824935|ref|XP_645822.1| hypothetical protein DDB_G0271100 [Dictyostelium discoideum AX4]
gi|60473944|gb|EAL71882.1| hypothetical protein DDB_G0271100 [Dictyostelium discoideum AX4]
Length = 526
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 94/147 (63%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V ++C++V PK RPNEG N ++SPM+S + + R +EK K+
Sbjct: 52 TRVFTAITCDIVEPKPERPNEGFYIFNTDISPMSSVSVNVNQPNPMESELGRIIEKGLKD 111
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ ID E+LC+++ KVW++++ ++VL+ GNLL C SI+ + AL HFR PDVT G+
Sbjct: 112 SRAIDTEALCIISGSKVWSIKIAIHVLDDCGNLLDCASISVMTALIHFRKPDVTVIGNDA 171
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
IHS E++P+P++I H P++I++ F
Sbjct: 172 TIHSLDEREPVPLSIHHTPISITFGFF 198
>gi|330935982|ref|XP_003305202.1| hypothetical protein PTT_17982 [Pyrenophora teres f. teres 0-1]
gi|311317878|gb|EFQ86700.1| hypothetical protein PTT_17982 [Pyrenophora teres f. teres 0-1]
Length = 291
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 106/176 (60%), Gaps = 11/176 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A++S ++ P R +G+ I E SPMASP FE GR TD+ V+++R LEK +
Sbjct: 54 TRVIARISVDVTTPLPERKFDGIFQIVTEFSPMASPAFEVGRPTDSEVILSRILEKAIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A K + +R D++++++DG L+ IA +AAL HFR PDV G++
Sbjct: 114 SNALDTESLCIIAGSKCFALRADVHIIDHDGGLIDASCIAVMAALQHFRRPDVVVEGEKA 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQ 629
I S +++PIP++ILH P+ ++++ F E +D LA Q RQ
Sbjct: 174 TILSVRDREPIPLSILHQPLCVTFSYFE-----------DEIFLIDANLAEEQVRQ 218
>gi|358336680|dbj|GAA55137.1| 20S proteasome subunit alpha 3, partial [Clonorchis sinensis]
Length = 924
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 164/378 (43%), Gaps = 129/378 (34%)
Query: 46 LLEEINFQRAKEKRQYLRNDMFLTQ---GTSYWTDLFVRYFLFQTDSNIDC----DDLLF 98
LL I R ++ Q L ND + T W +LF + FL ++ DDLLF
Sbjct: 63 LLATIIQIREQQTAQSLINDSEYPEFQSSTDSWCNLFSQGFLVNPAASHSTHGPRDDLLF 122
Query: 99 FVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPI-GDPDVDWE------------------ 139
FV K+ P + + V RK+S LP GD V+WE
Sbjct: 123 FVDKQ-------RSPGSKCALRVLRKNSPNLPSPGDGSVNWEQTVYLNLLMQYLQPLYDK 175
Query: 140 -------------------------------ETVYLNMIIHQ---------------FDY 153
E VY N+ H F Y
Sbjct: 176 YAVLTADDDDDDESDTISTVPQLNVVHWLRHELVYQNVRHHHHRQHDIGVQHRCFTAFIY 235
Query: 154 TLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFH 213
T+A+CTRT P +Q+LK+ S+ VYASPSRRRMD+KG EE+ YP + F+V+N++E+F
Sbjct: 236 VATVAVCTRTGPHEIQILKKFSETVYASPSRRRMDSKGTREEVVYPNLFFSVENYSELFS 295
Query: 214 DILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSV------------- 260
+ +RD E +CVEL A D +G ++ V FLG+++Y +LK+ +D++ S+
Sbjct: 296 ECSLRDSECLCVELTAYDLSGRLQGVCFLGTLQYGSLKKFHDSKVSLFLRYRLHLNILWF 355
Query: 261 ------SNKF-------------------TQRM--------SFGIFSNNSNSR----IEF 283
N+F T R+ FG N+ S ++F
Sbjct: 356 RILEYRLNRFLSIDVAHSPLPLLEPQTAPTSRLDTTTMLKRQFGTTPNHVQSSRLSDVKF 415
Query: 284 VKMKGPQGKGFAEMAVTK 301
+++ GPQGKG AE A+++
Sbjct: 416 MQVLGPQGKGQAEFAISR 433
>gi|384499441|gb|EIE89932.1| hypothetical protein RO3G_14643 [Rhizopus delemar RA 99-880]
Length = 204
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V A V+ +V P A RP EG+L N E+SPMA+P FE+G +++ V+I+R +EK +
Sbjct: 54 TKVAANVTAEVVRPYADRPTEGILIFNTEISPMAAPTFESGSRSEEEVLISRVVEKALRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ ID E LC+V+ EKVW +RVDL L++DGNL+ C IAA+ AL HFR PDVT +G+ +
Sbjct: 114 SRAIDTEGLCIVSGEKVWQIRVDLMFLDHDGNLVDCACIAAITALLHFRRPDVTVSGEDV 173
Query: 574 -IIHSAA 579
I H+ A
Sbjct: 174 TIFHTTA 180
>gi|339239765|ref|XP_003375808.1| exosome complex exonuclease RRP45 [Trichinella spiralis]
gi|316975514|gb|EFV58947.1| exosome complex exonuclease RRP45 [Trichinella spiralis]
Length = 448
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 101/174 (58%), Gaps = 1/174 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V + SC++V P TRP+ G+L IN E P A +E GR + + R LE+ K+
Sbjct: 69 TKVFVKTSCSVVTPSLTRPSSGILKINLEFGPQAVAHYEVGR-LEKCIEYQRLLERNIKD 127
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
++C+ L++LC+++ EKVW +R D+ VLN DG+L+ C +A L+AL HFR P VT G
Sbjct: 128 ARCVCLDTLCIISGEKVWQIRCDVYVLNNDGSLVDCACVAILSALRHFRIPSVTRHGTDY 187
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQD 627
IHS +K+P+ + I HYP I+ ++G P E LD L+ +
Sbjct: 188 TIHSFDDKEPLRLDIFHYPCMITLGYYSGKEIFICEPSLLEETVLDQCFILAMN 241
>gi|254572173|ref|XP_002493196.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|238032994|emb|CAY71017.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|328352789|emb|CCA39187.1| exosome complex component RRP45 [Komagataella pastoris CBS 7435]
Length = 298
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 115/187 (61%), Gaps = 5/187 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF-ETGRQTDTSVMINRFLEKCFK 512
++V+ ++S +V P RP EG+ +++EL M P F E + + VM++R +EK +
Sbjct: 48 AKVVVRISSEIVTPYEDRPFEGIFQVSSELDGMGHPSFNEASHRQEEEVMLSRLIEKAIR 107
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +DLESLC++A +K W+VR D+++++YDGN+ I +A L HF+ PD++
Sbjct: 108 RSNALDLESLCIIAGQKCWSVRADVHIIDYDGNMTDIVCIGVIAGLLHFKKPDISIRNGT 167
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG-FTECIQLDTAL---ALSQDR 628
+I+H +E++P+P+++LH P+ +++ +++ GS V G E + +D L AL+Q
Sbjct: 168 VILHDMSEREPVPLSVLHIPICVTFQIYSSGSMEDNVKGDGREFVIVDATLKEEALTQGT 227
Query: 629 QKLGVDS 635
L ++S
Sbjct: 228 ITLTLNS 234
>gi|189206730|ref|XP_001939699.1| 3' exoribonuclease [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975792|gb|EDU42418.1| 3' exoribonuclease [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 291
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A++S ++ P R +G+ I E SPMASP FE GR TD V+++R LEK +
Sbjct: 54 TRVIARISVDVTTPLPERKFDGIFQIVTEFSPMASPAFEVGRPTDAEVILSRILEKAIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A K + +R D++++++DG L+ IA +AAL HFR PDV G++
Sbjct: 114 SNALDTESLCIIAGSKCFALRADVHIIDHDGGLIDASCIAVMAALQHFRRPDVVVEGEKA 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQ 629
I S +++PIP++ILH P+ ++++ F E +D LA Q RQ
Sbjct: 174 TILSVRDREPIPLSILHQPLCVTFSYFE-----------DEIFLIDANLAEEQVRQ 218
>gi|444315341|ref|XP_004178328.1| hypothetical protein TBLA_0A10310 [Tetrapisispora blattae CBS 6284]
gi|387511367|emb|CCH58809.1| hypothetical protein TBLA_0A10310 [Tetrapisispora blattae CBS 6284]
Length = 305
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFK 512
++V ++SC++ P RP EGL I+ E+SP+A QFE G T D V+ +R LEK +
Sbjct: 54 TKVHCRISCSLTQPYEDRPFEGLFVISTEISPIAGAQFENGNNTGDYEVLCSRILEKSIR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W +R D++ L+ DG + IA +AAL HF+ PD++ G+Q
Sbjct: 114 RSGALDVEGLCIVAGSKCWTIRADVHFLDCDGGFIDASCIAVMAALLHFKKPDISVHGEQ 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+II E+ P+P+ ILH P+ ++++ FN
Sbjct: 174 VIILPVDERPPVPLGILHIPICVTFSFFN 202
>gi|358056344|dbj|GAA97711.1| hypothetical protein E5Q_04390 [Mixia osmundae IAM 14324]
Length = 287
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
S AE G +V C K + V+AQVS +V P RP EG L I+ E++P+AS +E RQ
Sbjct: 38 SFGAELG-SVTCSMGK-TRVMAQVSAEVVRPPPERPYEGFLVISTEVTPLASAAYEMNRQ 95
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
T+ +++ R LEK + ++ +D ESLC+VA +KVW++RVD++ LN DGNL C +AA+A
Sbjct: 96 TEEEILVARTLEKAIRRTEAVDRESLCIVAGDKVWSIRVDVHFLNDDGNLADCACLAAMA 155
Query: 557 ALAHFRHPDVT-STGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
AL HFR PDVT G + IHS E+ P+P+ I H P+ +++A F
Sbjct: 156 ALLHFRRPDVTVENGADVTIHSLEERVPVPLAIHHTPLCVTFAFF 200
>gi|409041875|gb|EKM51360.1| hypothetical protein PHACADRAFT_129278 [Phanerochaete carnosa
HHB-10118-sp]
Length = 283
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 95/147 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQV MV P RP EG++ IN+E+SPMAS ++E GR +D V + R L+K +
Sbjct: 54 TRVLAQVDGKMVKPTPERPLEGIITINSEISPMASSEYEPGRPSDEEVTMTRMLDKVLRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCV A ++VW++R+ ++ L GNLL C +A + AL H+R P+V GD++
Sbjct: 114 SDAVDKESLCVQAGQRVWHLRLTIHCLADAGNLLDCACLAGIVALKHYRRPEVEVVGDEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
IH +E+ P+ +++ H P ++A F
Sbjct: 174 TIHHPSERAPVSLSLHHTPYCFTFAYF 200
>gi|313230944|emb|CBY18942.1| unnamed protein product [Oikopleura dioica]
Length = 441
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 94/146 (64%), Gaps = 2/146 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ LA VSC++ P RP+EG + EL P+ASP FE +++ ++ +NR LEK +
Sbjct: 53 TRALAHVSCSLDRPSEVRPSEGKIVFKVELPPLASPSFELNKKSAFAIDLNRLLEKAIVQ 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+CID+E LCV A E+ W +RV++ LN++GNL +AA+ AL HF+ P+VT G +
Sbjct: 113 SRCIDIEELCVRAGEQCWTLRVEVTALNHEGNLSDALCLAAMGALMHFKRPEVTVDGHDV 172
Query: 574 IIHSAAEKDPIPMTILHYP--VTISY 597
IH+A EK+P +T+ H P VTI Y
Sbjct: 173 KIHTADEKEPTRLTLHHKPFCVTIGY 198
>gi|353237792|emb|CCA69757.1| probable RRP45-Exosome complex exonuclease [Piriformospora indica
DSM 11827]
Length = 313
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 96/148 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA V MV P RP EG + I++E SPMAS ++E GR +D V I R L+K +
Sbjct: 54 TRVLASVEAKMVKPTPDRPYEGTINIHSEFSPMASSEYEQGRTSDEEVTITRMLDKVLRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCVVA ++VW++++ + L+ GN+L C +A + AL HFR P+V G+++
Sbjct: 114 SDALDKESLCVVAGQRVWSLKLTVQFLSDAGNMLDCACLAGIVALRHFRKPEVEIDGEEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
I+HS + P+P+ I H P+ ++A+++
Sbjct: 174 IVHSPDSRAPLPLAIHHTPICFTFALYS 201
>gi|354547981|emb|CCE44716.1| hypothetical protein CPAR2_405200 [Candida parapsilosis]
Length = 330
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 3/157 (1%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT-SVMINRFLEKCFKESKC 516
+V+ +V P RP EG+ IN+E+SP AS +F+T RQ V+++R LEK + S
Sbjct: 62 VRVTAQIVKPYPDRPFEGIFTINSEVSPQASLKFDTTRQQQQDEVLVSRILEKAIRRSNA 121
Query: 517 IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD--QII 574
+DLESLC+VA +KVW + VDLN NYDGNL+ A + AL HFR PD++ GD +
Sbjct: 122 VDLESLCIVAGDKVWELCVDLNFWNYDGNLIDVGCFATMLALLHFRKPDISIHGDGGAVT 181
Query: 575 IHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
+H E+ P+ ++ILH P+ ++++ +N S+ + G
Sbjct: 182 VHDVNERQPVSLSILHVPICLTFSFYNLSSQEMNIKG 218
>gi|344234677|gb|EGV66545.1| ribosomal protein S5 domain 2-like protein [Candida tenuis ATCC
10573]
Length = 301
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 100/149 (67%), Gaps = 3/149 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ + S +V P RPNEGLL IN ELSPMAS +F+ R D VMINR +EK ++
Sbjct: 52 TKVVIKTSSEIVKPFEDRPNEGLLVINNELSPMASIKFDE-RSVD-EVMINRIIEKSIRK 109
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT-STGDQ 572
S +DLE LC+ EKVW +RVDL+++N+DGNL+ C ++ +L HF+ P+ + T
Sbjct: 110 SNALDLEGLCIKTGEKVWLIRVDLSIINFDGNLIDSCCFGSIISLIHFKLPNYSLDTNGN 169
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
I +++ EK PI +++LH P+T+S + FN
Sbjct: 170 IKVYNLDEKPPISLSVLHIPITLSISFFN 198
>gi|356497351|ref|XP_003517524.1| PREDICTED: exosome complex component rrp45-like [Glycine max]
Length = 350
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR TD +V + R +++ +E
Sbjct: 58 THVITFVTAQLVRPYRDRPNEGSLSIFTEFSPMADPSFEPGRPTDAAVELGRVVDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ ID ESLCV++ + VW +RVD+++L+ GNL+ +IAAL +L FR P+ + TG+
Sbjct: 118 SRAIDTESLCVLSGKLVWAIRVDIHILDNAGNLVDAANIAALVSLLTFRRPECSLTGEDG 177
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+++H E+DPIP+ I H P+ +++ F+
Sbjct: 178 QDVVVHPPEERDPIPLIIHHLPIAVTFGFFS 208
>gi|323355606|gb|EGA87426.1| Rrp45p [Saccharomyces cerevisiae VL3]
Length = 212
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 12/209 (5%)
Query: 390 MRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCP 449
M +++ A + + Q + + + + DV+ + + +S + G
Sbjct: 1 MAKDIEISASESKFILEALRQNYRL--DGRSFDQFRDVEITFGKEFGDVSVKMGN----- 53
Query: 450 WVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLE 508
++V ++SC + P RP EGL I+ E+SPMA QFE G T + V+ +R +E
Sbjct: 54 ----TKVHCRISCQIAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIE 109
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K + S +D+E LC+VA K W VR D++ L+ DG + IA +A L HF+ PD+T
Sbjct: 110 KSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITV 169
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISY 597
G+QII+H E++P+P+ ILH P+ +++
Sbjct: 170 HGEQIIVHPVNEREPVPLGILHIPICVTF 198
>gi|25144570|ref|NP_741217.1| Protein EXOS-9, isoform a [Caenorhabditis elegans]
gi|351062706|emb|CCD70741.1| Protein EXOS-9, isoform a [Caenorhabditis elegans]
Length = 434
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 141/263 (53%), Gaps = 12/263 (4%)
Query: 428 DFMSSENWTSI----SAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAEL 483
DF S E + + AE G A+ + ++V+A VS + P + RP++G++ I+ +L
Sbjct: 25 DFRSLEEFRDVKLVVGAEVGTAIC--TIGNTKVMAAVSAEIAEPSSMRPHKGVINIDVDL 82
Query: 484 SPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYD 543
SPMA+ E R + + R LE ++S+CID+E+LC+ A +++W +RVD+ +L+ D
Sbjct: 83 SPMANYANEHDRLGSKGMELIRLLELIIRDSRCIDVEALCIRAGKEIWKIRVDVRILDED 142
Query: 544 GNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
G+LL C +AA+ AL HFR P+VT +I+S EK P+P+ I H P+ + + + G
Sbjct: 143 GSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEKAPVPLNIYHMPICTTIGLLDKG 202
Query: 604 SEGSTVPGFTECIQLDTALALS-QDRQKLGVDSAYANLVNKTDRILLDEGEKDSGETKVK 662
P E LD ++ ++ R+++ NL+ T +I E+ +
Sbjct: 203 QIVVIDPTDKETACLDGSIVVACNKRREVCALHQSTNLILSTKQI-----ERCVKLAMAR 257
Query: 663 VEKVGPGIADLISKSDIEPSGIK 685
E + ++D+I + IE S K
Sbjct: 258 AEALTAVVSDVIKQDQIERSAFK 280
>gi|326493068|dbj|BAJ84995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 104/154 (67%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR + ++ + R +++ +E
Sbjct: 55 TRVMGYVTAQLVQPYKDRPNEGTLAIFTEFSPMADPAFEPGRPGEAAIELGRVIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW+VRVDL++L+ +GNL+ +IAALAAL+ FR P+ T GD
Sbjct: 115 SRAVDMESLCVVAGKHVWSVRVDLHILDNEGNLIDAANIAALAALSTFRRPECTVGGDDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H + +DP+P+TI H P+ +++A F G+
Sbjct: 175 QQVTVHDSEVRDPLPLTIHHLPIAVTFAYFGDGN 208
>gi|320582164|gb|EFW96382.1| Exosome non-catalytic core component [Ogataea parapolymorpha DL-1]
Length = 311
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETG-----RQTDTSVMINRFLE 508
++V +V+ + P RP +G+ I+ ++SP+ SP FE+G +Q++ ++I+R +E
Sbjct: 55 TKVACRVTAEITKPYEDRPFDGIFQISTDISPICSPFFESGLTTGSKQSNDEILISRLIE 114
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K + S +DLESLC++A K W VR DL LNYDGN + SIA + AL HFR PD+
Sbjct: 115 KAVRRSGALDLESLCIIAGSKCWAVRADLQFLNYDGNFIDISSIAVMVALLHFRKPDMEI 174
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG--FTECIQLDTALALSQ 626
G+ +I+ +++P+P++ILH P+ ++ +N + + G E I LD L +
Sbjct: 175 DGNNVILFDEDQRNPVPLSILHIPLCFTFQFYNPNDDEENIKGNLNNELILLDANLI--E 232
Query: 627 DRQKLG 632
+R LG
Sbjct: 233 ERLSLG 238
>gi|326498189|dbj|BAJ94957.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 104/154 (67%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR + ++ + R +++ +E
Sbjct: 55 TRVMGYVTAQLVQPYKDRPNEGTLAIFTEFSPMADPAFEPGRPGEAAIELGRVIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW+VRVDL++L+ +GNL+ +IAALAAL+ FR P+ T GD
Sbjct: 115 SRAVDMESLCVVAGKHVWSVRVDLHILDNEGNLIDAANIAALAALSTFRRPECTVGGDDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H + +DP+P+TI H P+ +++A F G+
Sbjct: 175 QQVTVHDSEVRDPLPLTIHHLPIAVTFAYFGDGN 208
>gi|367014585|ref|XP_003681792.1| hypothetical protein TDEL_0E03380 [Torulaspora delbrueckii]
gi|359749453|emb|CCE92581.1| hypothetical protein TDEL_0E03380 [Torulaspora delbrueckii]
Length = 305
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFK 512
++V ++SC + P RP EGL I+ E SPMA PQFE G T + V+ R +EK +
Sbjct: 54 TKVQCRISCQIAQPYEDRPFEGLFLISTESSPMAGPQFENGNNTGEDEVLCARIIEKAVR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +D+E LC+VA K W VR D++ L+ DG + +A + AL HF+ PD++ GD+
Sbjct: 114 RSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCVAVMTALLHFKKPDISVLGDR 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ +H E++P+ + ILH P+ ++++ FN
Sbjct: 174 VTVHPVDEREPVSLGILHIPICVTFSFFN 202
>gi|297817356|ref|XP_002876561.1| hypothetical protein ARALYDRAFT_486522 [Arabidopsis lyrata subsp.
lyrata]
gi|297322399|gb|EFH52820.1| hypothetical protein ARALYDRAFT_486522 [Arabidopsis lyrata subsp.
lyrata]
Length = 438
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 152/279 (54%), Gaps = 27/279 (9%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ MV P RPNEG L I E SPMA P FE GR +++V + R +++ +E
Sbjct: 58 THVMGFVTAQMVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STG 570
S+ +D ESLC++A + VW+VR+DL++L+ GNL+ +IAALAAL FR PD T G
Sbjct: 118 SRAVDTESLCILAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENG 177
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE----CIQLDTALALSQ 626
++IIH E++P+P+ I H P+ ++ FN G+ P + E C ++ + +
Sbjct: 178 QEVIIHPPEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANG 237
Query: 627 D---RQKLGVDSAYANLV-----------NKTDRILLDEGEKDSGETKVKVEKVGPGIAD 672
D QK G + +++ T +I+ +E E + E ++ K P +A
Sbjct: 238 DICAIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNRERSLQKVKRHPTLA- 296
Query: 673 LISKSDIE-PS-GIKNQWVSSSDDESSAEDDKAETPRVQ 709
KS++ P+ +K ++ SSD E +AE + R++
Sbjct: 297 ---KSEVSGPTVAVKEEYRKSSDQEKAAEISREHVERLK 332
>gi|393247723|gb|EJD55230.1| ribosomal protein S5 domain 2-like protein [Auricularia delicata
TFB-10046 SS5]
Length = 285
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 446 VWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETG--RQTDTSVMI 503
V C K + V+A + MV P+ R EG++ I++ELSPMAS ++E G R ++ V I
Sbjct: 47 VECSLGKTNRVIASIEAKMVRPQPDRLFEGIITIHSELSPMASSEYEGGYGRPSEQEVEI 106
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R L+K + S ID ESLCV+A ++VW++R+ + L GN+L C +A + AL HFR
Sbjct: 107 TRMLDKVLRRSDAIDKESLCVLAGQRVWHLRLTFHFLADAGNMLDCACLAGITALKHFRR 166
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
P+V GD++ IH+ E+ P+P+ I H P+ +++A+F+
Sbjct: 167 PEVEVVGDEVTIHAPEERAPLPLAIHHTPLCLTFALFD 204
>gi|346971187|gb|EGY14639.1| exosome complex exonuclease RRP45 [Verticillium dahliae VdLs.17]
Length = 305
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 101/147 (68%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + +P A RP +G+ + ELSPMASP FE G+ TDT ++++R LEK +
Sbjct: 54 TRVIVRISAEVTVPHADRPFDGIFQLATELSPMASPHFEPGKPTDTEMLLSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D+ESLC+VA KVW+VR D++V+++DGN++ +AA+AAL HFR PD G+ +
Sbjct: 114 SGALDMESLCLVAGAKVWSVRADVHVVSHDGNIVDAACLAAVAALRHFRKPDAQVDGEDL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
+ + AE+ P+P+ LH P +++A F
Sbjct: 174 TVFTPAERAPVPLGWLHSPFCVTFAHF 200
>gi|50305471|ref|XP_452695.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641828|emb|CAH01546.1| KLLA0C11099p [Kluyveromyces lactis]
Length = 305
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 106/178 (59%), Gaps = 3/178 (1%)
Query: 427 VDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
+D S + + + E GEA V ++V ++SC + P RP EGL I+ E +
Sbjct: 25 LDGRSYDQFRDVKIEIGEAYGDVTVTMGNTKVHCRISCEIAQPYEDRPFEGLFHISTETT 84
Query: 485 PMASPQFETGRQT-DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYD 543
PMA QFE G T + V+I+R +EK + S +D+E LC++A K W++R D++ L+ D
Sbjct: 85 PMAGAQFENGNNTGEEEVLISRMIEKAVRRSGALDVEGLCIIAGSKCWSLRADVHFLDCD 144
Query: 544 GNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
G L+ IA +A L HF+ PDVT G+++ +H E++P+ + +LH P+ ++++ FN
Sbjct: 145 GGLIDASCIAVMAGLLHFKKPDVTVLGERVTVHPIDEREPVSLGVLHVPICVTFSFFN 202
>gi|356539154|ref|XP_003538065.1| PREDICTED: exosome complex component rrp45-like [Glycine max]
Length = 438
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P F+ GR +D +V + R +++ +E
Sbjct: 58 THVMTFVTAQLVRPYRDRPNEGSLSIFTEFSPMADPSFDPGRPSDAAVELGRVVDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ ID ESLCV++ + VW +RVD+++L+ GNL+ +IAALA+L FR P+ + G+
Sbjct: 118 SRAIDTESLCVLSGKLVWAIRVDIHILDNAGNLVDAANIAALASLLTFRRPECSLAGEDG 177
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+++H E+DPIP+ I H P+ +++ F+
Sbjct: 178 QDVVVHPPEERDPIPLIIHHLPIAVTFGFFS 208
>gi|452823313|gb|EME30324.1| exosome complex component RRP45 [Galdieria sulphuraria]
Length = 389
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 166/321 (51%), Gaps = 35/321 (10%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFE-----TGRQTDT---SVMINR 505
++V + +V P RP EG + + +LSPMAS +GR + T + I R
Sbjct: 53 TKVFSSAIAEVVEPTIDRPAEGFVTFSVDLSPMASENLMLEYLYSGRTSSTLEEAAEIVR 112
Query: 506 FLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
FL++ +E++ ID E+LC+VA +VW +RVD++VL++ GN+L C +AA+A+L H R P
Sbjct: 113 FLQQIIRENQAIDTETLCIVAGVQVWAIRVDIHVLDHCGNVLDACCMAAVASLLHMRKPV 172
Query: 566 VTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALS 625
VT G + IH E++P+P+T+ H P+++S+ +F G + P E ++ L+++
Sbjct: 173 VTVVGKDVFIHGIDEREPVPLTVHHLPISVSFGIFLDGDLIAIDPSIQEESVMEGTLSIA 232
Query: 626 QDRQK-----------------LGVDSAYANLVNKTDRILLDEGEKDSGETKVKVEKVGP 668
+ K + +++YA L + L++ KD+ ++ V V P
Sbjct: 233 VNAHKEICAFRKAGGASIETSLIFKNASYAYLRATEVTVQLEKALKDT-YSRNAVASVKP 291
Query: 669 GIADLISKS---DIEPSGIKNQWVSSSDDESSAEDDKAET---PRVQSVEDEGDEVMLVD 722
+ KS + + G+ W + + SA +DK +T P + SV + E+ + D
Sbjct: 292 LQVETTKKSFPLNEQVQGVTTVWKQVA--KQSALEDKEKTVDQPNITSVTNAEMEIFIDD 349
Query: 723 SVNPRTKVREEVVLSGDSEEE 743
S TK +E+ S DS+EE
Sbjct: 350 SEESYTK-SDELSASTDSDEE 369
>gi|45184700|ref|NP_982418.1| AAL124Wp [Ashbya gossypii ATCC 10895]
gi|44980046|gb|AAS50242.1| AAL124Wp [Ashbya gossypii ATCC 10895]
gi|374105616|gb|AEY94527.1| FAAL124Wp [Ashbya gossypii FDAG1]
Length = 305
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 93/149 (62%), Gaps = 1/149 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLEKCFK 512
+++ ++S + P RP EGL I+ E+SPMA QFE G T + V+I+R +EK +
Sbjct: 54 TKIHCRISAQIAQPYEDRPFEGLFVISTEMSPMAGAQFENGNNTGEDEVLISRMIEKAVR 113
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +DLE LC++A K W +R D++ L+ DG + IA + L HFR PDV+ G+Q
Sbjct: 114 RSSAMDLEGLCIIAGSKCWAIRADVHFLDCDGGFIDASCIAVMTGLLHFRKPDVSVQGEQ 173
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+I+H E++P+ + ILH PV ++++ +N
Sbjct: 174 VIVHPVDEREPVALGILHIPVCVTFSFYN 202
>gi|308502001|ref|XP_003113185.1| CRE-EXOS-9 protein [Caenorhabditis remanei]
gi|308265486|gb|EFP09439.1| CRE-EXOS-9 protein [Caenorhabditis remanei]
Length = 432
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 7/225 (3%)
Query: 428 DFMSSENWTSI----SAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAEL 483
DF S E + + +E G A+ + ++V+A VS + P + RPN+G++ I+ +L
Sbjct: 25 DFRSLEEFRDVKLVVGSEVGTAIC--TIGNTKVMAAVSAQIAEPSSMRPNKGVINIDVDL 82
Query: 484 SPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYD 543
SPMA+ E R + + R LE ++S+CID+ESLC+ A ++W VRVD+ +L+ D
Sbjct: 83 SPMANVANEHDRLGSKGMELIRLLELIIRDSRCIDVESLCIRAGSEIWKVRVDVRILDED 142
Query: 544 GNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
G+LL C +AA+ AL HF+ P+V+ +I+S EK P+P+ I H P+ + + + G
Sbjct: 143 GSLLDCACLAAITALQHFKRPNVSLEAHHTLIYSEYEKAPVPLNIYHMPICTTIGLLDKG 202
Query: 604 SEGSTVPGFTECIQLDTALALS-QDRQKLGVDSAYANLVNKTDRI 647
P E LD ++ ++ R+++ NLV T +I
Sbjct: 203 QMVVIDPTEKEAACLDGSIVVACNKRREVCALHQSTNLVLTTKQI 247
>gi|302903929|ref|XP_003048964.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729898|gb|EEU43251.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 293
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+V+ + +P + RP +G+ I +ELSPM +P +E R + V+++R LEK +
Sbjct: 54 TRVLAKVTAEVTVPYSDRPFDGVFTITSELSPMVAPSYEVNRPSLEEVLLSRLLEKTVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A +K W++RVDL+VL +DGNL +A +AAL HFR PD + G+ +
Sbjct: 114 SGALDTESLCLIAGQKCWSIRVDLHVLTHDGNLTDAACLAVVAALRHFRKPDSSIEGENL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
+++ AE++P+P++ LH P ++Y+ F G EG+ V
Sbjct: 174 TVYTPAEREPVPLSWLHSPFCVTYSFF--GEEGNQV 207
>gi|413937195|gb|AFW71746.1| hypothetical protein ZEAMMB73_342555 [Zea mays]
gi|413937196|gb|AFW71747.1| hypothetical protein ZEAMMB73_342555 [Zea mays]
Length = 446
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR + ++ + R +++ +E
Sbjct: 55 THVMGYVTVQLVQPYRDRPNEGTLAIFTEFSPMADPSFEPGRPGELAIELGRVIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW+VRVDL++L+ GNL+ +IAALAAL+ FR P+ T GD
Sbjct: 115 SRAVDMESLCVVAGKHVWSVRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGDDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 175 QQVTVHDPEVRDPLPLTIHHMPIAVTFAYFGEGN 208
>gi|268573886|ref|XP_002641920.1| C. briggsae CBR-EXOS-9 protein [Caenorhabditis briggsae]
Length = 434
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
+ +E G A+ + ++V+A VS + P + RP++G++ I+ +LSPMA+ E R
Sbjct: 39 VGSEIGTAIC--TIGNTKVIAAVSAQIAEPSSMRPHKGVIIIDVDLSPMANVSNEHDRLG 96
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAA 557
+ + R LE ++S+CID+ESLC+ A +++W VRVD+ +L+ DG+LL C +AA+ A
Sbjct: 97 SKGMELIRLLELIIRDSRCIDVESLCIRAGKEIWKVRVDVRILDEDGSLLDCACLAAITA 156
Query: 558 LAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQ 617
L HF+ P+VT +I+S EK P+P+ I H P+ + + + G P E
Sbjct: 157 LQHFKRPNVTLEPHHTLIYSEYEKAPVPLNIYHMPICTTIGLLDKGQMVVIDPTEKEAAC 216
Query: 618 LDTALALS-QDRQKLGVDSAYANLVNKTDRI 647
LD ++ ++ R+++ NLV T +I
Sbjct: 217 LDGSIVVACNKRREVCALHQSTNLVLSTKQI 247
>gi|452843608|gb|EME45543.1| hypothetical protein DOTSEDRAFT_71300 [Dothistroma septosporum
NZE10]
Length = 299
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 95/150 (63%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ +S +V P R +G+ I+ ELSP+ASP FE GRQ T V+++R LEK +
Sbjct: 54 TRVMVTISAELVTPYPDRKFDGVFTISTELSPIASPAFEVGRQDQTEVLLSRILEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A K W++R D+++L++DGN++ IA +AAL HFR PD G+++
Sbjct: 114 SGALDTESLCIIAGAKCWHIRADIHILDHDGNIVDASCIALVAALMHFRRPDHEIHGEEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
++ E++P+ + + H P I+ + + G
Sbjct: 174 TVYGLREREPVKLQMQHQPFCITTSYYEAG 203
>gi|293335353|ref|NP_001170333.1| uncharacterized protein LOC100384304 [Zea mays]
gi|224030955|gb|ACN34553.1| unknown [Zea mays]
gi|224035157|gb|ACN36654.1| unknown [Zea mays]
gi|413937197|gb|AFW71748.1| hypothetical protein ZEAMMB73_342555 [Zea mays]
Length = 393
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR + ++ + R +++ +E
Sbjct: 55 THVMGYVTVQLVQPYRDRPNEGTLAIFTEFSPMADPSFEPGRPGELAIELGRVIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW+VRVDL++L+ GNL+ +IAALAAL+ FR P+ T GD
Sbjct: 115 SRAVDMESLCVVAGKHVWSVRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGDDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 175 QQVTVHDPEVRDPLPLTIHHMPIAVTFAYFGEGN 208
>gi|357447261|ref|XP_003593906.1| Exosome complex exonuclease RRP45 [Medicago truncatula]
gi|355482954|gb|AES64157.1| Exosome complex exonuclease RRP45 [Medicago truncatula]
Length = 449
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 99/151 (65%), Gaps = 3/151 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V++ VS +V P RPNEG L I E SPMA P FE GR +++V + R +++ +E
Sbjct: 58 TRVMSFVSAQLVQPYKDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ ID ESLC+++ + VW +R+D+++L+ GNL+ +IAALA+L FR P+ + G+
Sbjct: 118 SRAIDTESLCILSAKLVWAIRIDIHILDNAGNLVDAANIAALASLKTFRRPECSLGGEDG 177
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
Q+++H ++P+P+ I H PV +++ F+
Sbjct: 178 QQVVVHPPEVREPLPLIIHHLPVAVTFGFFS 208
>gi|413937194|gb|AFW71745.1| hypothetical protein ZEAMMB73_342555 [Zea mays]
Length = 363
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR + ++ + R +++ +E
Sbjct: 55 THVMGYVTVQLVQPYRDRPNEGTLAIFTEFSPMADPSFEPGRPGELAIELGRVIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW+VRVDL++L+ GNL+ +IAALAAL+ FR P+ T GD
Sbjct: 115 SRAVDMESLCVVAGKHVWSVRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGDDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 175 QQVTVHDPEVRDPLPLTIHHMPIAVTFAYFGEGN 208
>gi|363752717|ref|XP_003646575.1| hypothetical protein Ecym_4741 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890210|gb|AET39758.1| hypothetical protein Ecym_4741 [Eremothecium cymbalariae
DBVPG#7215]
Length = 305
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 450 WVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT-DTSVMINRFLE 508
++ ++V + + + P RP EGL I+ E+SPMA QFE G T + V+I+R +E
Sbjct: 50 YLGETKVHCRTTAEISQPYDNRPFEGLFLISTEMSPMAGTQFEHGNNTGEDEVLISRIIE 109
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K + S +DLE LC+ A K W++R D++ L+ DG + IA +A+L HFR PDVT
Sbjct: 110 KSVRRSGALDLEGLCISAGSKCWSIRADVHFLDCDGGFIDASCIAVMASLLHFRKPDVTV 169
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
G+++ +HS E++ +P+ ILH P+ ++++ FN + + G
Sbjct: 170 FGERVTVHSIEEREAVPLGILHIPICVTFSFFNPDATEENIKG 212
>gi|116207378|ref|XP_001229498.1| hypothetical protein CHGG_02982 [Chaetomium globosum CBS 148.51]
gi|88183579|gb|EAQ91047.1| hypothetical protein CHGG_02982 [Chaetomium globosum CBS 148.51]
Length = 268
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA+ + + +P RP +G+ I ELSPM SP FE R T+T V+++R LEK +
Sbjct: 54 TRVLAKATAEVTVPYVDRPLDGIFTIATELSPMTSPAFEVNRPTETEVLLSRLLEKTVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+VA +K W+VRVD++V+++DG L +A +AAL HFR PD + ++
Sbjct: 114 SGALDTESLCLVAGQKCWSVRVDVHVVSHDGGLTDAACVAVVAALRHFRKPDTSMEAGRL 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGST 608
+++ AE++P+P++ LH P+ ++++ F G +G T
Sbjct: 174 TVYTPAEREPVPLSWLHSPLCVTWSFF--GDDGET 206
>gi|413937198|gb|AFW71749.1| hypothetical protein ZEAMMB73_342555 [Zea mays]
Length = 337
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR + ++ + R +++ +E
Sbjct: 55 THVMGYVTVQLVQPYRDRPNEGTLAIFTEFSPMADPSFEPGRPGELAIELGRVIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW+VRVDL++L+ GNL+ +IAALAAL+ FR P+ T GD
Sbjct: 115 SRAVDMESLCVVAGKHVWSVRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGDDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 175 QQVTVHDPEVRDPLPLTIHHMPIAVTFAYFGEGN 208
>gi|290990431|ref|XP_002677840.1| 3' exoribonuclease domain-containing protein [Naegleria gruberi]
gi|284091449|gb|EFC45096.1| 3' exoribonuclease domain-containing protein [Naegleria gruberi]
Length = 367
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 457 LAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF---ETGRQTDTSVMINRFLEKCFKE 513
L VSC+++ P RPNEG L + S + S +T +Q + + I R +++ +
Sbjct: 99 LGIVSCSIMEPYMDRPNEGFLTFQIDFSTVGSRPIGTKQTSQQRELCIEIGRVIDRSLRG 158
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ ID E+LC++A KVW++RVD+++L DGN+ CC +AA+AAL HF+ P+VT GD++
Sbjct: 159 SRSIDTEALCIIAGRKVWSLRVDVHILQDDGNVFDCCHLAAVAALLHFKRPEVTIEGDRV 218
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
++H+ ++ P+P+++ H P+ S++ F+ S
Sbjct: 219 VVHTVQDRQPVPLSVHHIPICTSFSFFDHDS 249
>gi|341897277|gb|EGT53212.1| CBN-EXOS-9 protein [Caenorhabditis brenneri]
Length = 432
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
+ AE G A+ + ++VLA VS + P + RP++G++ I+ +LSPMA+ E R
Sbjct: 39 VGAEIGTAIC--TIGNTKVLAAVSAQIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLG 96
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAA 557
+ + R LE ++S+CID+ESLC+ A +++W VRVD+ +L+ DG+LL C +AA+ A
Sbjct: 97 SRGMELIRLLELIIRDSRCIDVESLCIRAGKEIWKVRVDVRILDDDGSLLDCACLAAITA 156
Query: 558 LAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQ 617
L HF+ P+VT +I+S EK P+P+ I H P+ + + + G P E
Sbjct: 157 LQHFKRPNVTLEPHHTLIYSEYEKAPVPLNIYHMPICTTIGLLDKGQMVVIDPTDKEAAC 216
Query: 618 LDTALALS-QDRQKLGVDSAYANLVNKTDRI 647
LD ++ ++ R+++ NLV T +I
Sbjct: 217 LDGSIVVACNKRREVCALHQSTNLVLSTKQI 247
>gi|320591825|gb|EFX04264.1| exosome subunit rrp45 [Grosmannia clavigera kw1407]
Length = 294
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 10/209 (4%)
Query: 422 QDWTDVDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFI 479
QD +D S E++ I G+ V+ + V+A+ + + P + RP +G+ I
Sbjct: 20 QDGQRLDGRSFEDYRPIDLTLGDEFGVADVRIGNTRVVAKATAEVTTPFSDRPFDGIFNI 79
Query: 480 NAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNV 539
ELSPMASP FE GR ++ V+++R LEK + S +D ESLC+ A K W+VRVD++V
Sbjct: 80 VTELSPMASPSFEAGRPSEAEVLLSRILEKTIRRSGALDTESLCLAAGNKCWSVRVDVHV 139
Query: 540 LNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAV 599
++++GNL+ +A +AAL HFR + + + +++ AE++P+P++ LH P ++++
Sbjct: 140 MSHEGNLVDASCLAVVAALRHFRKAETSIENGVLTVYTPAEREPVPLSWLHSPFCVTFSF 199
Query: 600 FNGGSEGSTVPGFTECIQLDTALALSQDR 628
F TE LD +L Q R
Sbjct: 200 FEADD--------TEITLLDASLLEEQTR 220
>gi|15232342|ref|NP_191609.1| 3'-5'-exoribonuclease CER7 protein [Arabidopsis thaliana]
gi|42572741|ref|NP_974466.1| 3'-5'-exoribonuclease CER7 protein [Arabidopsis thaliana]
gi|334186154|ref|NP_001190143.1| 3'-5'-exoribonuclease CER7 protein [Arabidopsis thaliana]
gi|7287998|emb|CAB81836.1| nucleolar autoantigen-like protein [Arabidopsis thaliana]
gi|28393589|gb|AAO42214.1| putative nucleolar autoantigen protein [Arabidopsis thaliana]
gi|28973593|gb|AAO64121.1| putative nucleolar autoantigen protein [Arabidopsis thaliana]
gi|113196170|gb|ABI31441.1| CER7 [Arabidopsis thaliana]
gi|332646547|gb|AEE80068.1| 3'-5'-exoribonuclease CER7 protein [Arabidopsis thaliana]
gi|332646548|gb|AEE80069.1| 3'-5'-exoribonuclease CER7 protein [Arabidopsis thaliana]
gi|332646549|gb|AEE80070.1| 3'-5'-exoribonuclease CER7 protein [Arabidopsis thaliana]
Length = 438
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 151/279 (54%), Gaps = 27/279 (9%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR +++V + R +++ +E
Sbjct: 58 THVMGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STG 570
S+ +D ESLCV+A + VW+VR+DL++L+ GNL+ +IAALAAL FR PD T G
Sbjct: 118 SRAVDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENG 177
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE----CIQLDTALALSQ 626
++IIH E++P+P+ I H P+ ++ FN G+ P + E C ++ + +
Sbjct: 178 QEVIIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANG 237
Query: 627 D---RQKLGVDSAYANLV-----------NKTDRILLDEGEKDSGETKVKVEKVGPGIAD 672
D QK G + +++ T +I+ +E E + E ++ K P +A
Sbjct: 238 DICAIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLA- 296
Query: 673 LISKSDIE-PS-GIKNQWVSSSDDESSAEDDKAETPRVQ 709
KS++ P+ +K + SSD E +AE + R++
Sbjct: 297 ---KSEVSGPTVAVKEEHRKSSDQERAAEISREHVERLK 332
>gi|452985011|gb|EME84768.1| hypothetical protein MYCFIDRAFT_163550 [Pseudocercospora fijiensis
CIRAD86]
Length = 304
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 99/153 (64%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ + VLA++S +V P R +G+ I+ ELSP+ASP FE GRQ T V+++R LEK
Sbjct: 51 IGKTRVLAKISATVVQPYEDRKFDGVFTISTELSPIASPAFEVGRQDQTEVLLSRILEKT 110
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG 570
+ S +D ESLC+VA +K W+VR D+++L++DGNL+ A +AA+ HFR PDV G
Sbjct: 111 IRRSGALDTESLCIVAGQKCWHVRADIHILDHDGNLVDAACAALVAAIMHFRRPDVEVHG 170
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ + + E++P+ + + H P ++++ ++ G
Sbjct: 171 EDVTVFGLREREPVKLQMQHQPFCVTFSYYDAG 203
>gi|115446633|ref|NP_001047096.1| Os02g0550700 [Oryza sativa Japonica Group]
gi|50725756|dbj|BAD33267.1| putative polymyositis/scleroderma autoantigen 1 [Oryza sativa
Japonica Group]
gi|113536627|dbj|BAF09010.1| Os02g0550700 [Oryza sativa Japonica Group]
Length = 395
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ + +V P RPNEG L I E SPMA P FE GR ++++ + R +++ +E
Sbjct: 56 TRVMGYATAQLVQPYKDRPNEGTLAIFTEFSPMADPAFEPGRPGESAIELGRVVDRGLRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW+VRVDL++L+ GNL+ +IAALAAL+ FR P+ T G+
Sbjct: 116 SRAVDMESLCVVAGKHVWSVRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGEDG 175
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 176 QQVTVHDPEVRDPLPLTIHHLPIAVTFAYFGEGN 209
>gi|342877488|gb|EGU78940.1| hypothetical protein FOXB_10540 [Fusarium oxysporum Fo5176]
Length = 247
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCI 517
A+VS + +P + RP +G+ I +ELSPM +P +E R + V+++R LEK + S +
Sbjct: 12 AKVSAEVTVPYSDRPFDGVFTITSELSPMVAPSYEVNRPSLEEVLLSRLLEKTIRRSGAL 71
Query: 518 DLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHS 577
D ESLC++A +K W++RVDL+VL +DGNL +A +AAL HFR PD + G+ I I++
Sbjct: 72 DTESLCLIAGQKCWSIRVDLHVLTHDGNLTDAACLAVVAALRHFRKPDSSIEGENITIYT 131
Query: 578 AAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
AE++P+P++ LH P ++++ F G +GS V
Sbjct: 132 PAEREPVPLSWLHSPFCVTFSFF--GEDGSQV 161
>gi|357149446|ref|XP_003575115.1| PREDICTED: exosome complex component RRP45-like isoform 2
[Brachypodium distachyon]
Length = 394
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 165/315 (52%), Gaps = 29/315 (9%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RP+EG L I E SPMA P FE GR + ++ + R +++ +E
Sbjct: 55 TRVMGYVTAQLVQPYKDRPSEGTLAIFTEFSPMADPAFEPGRPGEAAIELGRVIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW++RVDL++L+ GNL+ +IAALAAL+ FR P+ T G+
Sbjct: 115 SRAVDMESLCVVAGKHVWSLRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGEDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDR-- 628
Q+ +H +DP+P+TI H P+ +++A F G+ P + E + + + +
Sbjct: 175 QQVTVHDPEVRDPLPLTIHHLPIAVTFAYFGDGNIMVIDPTYKEEAVMGGRMTATINSNG 234
Query: 629 -----QKLGVDSAYANLVNKTDRILLDEGEKDSGETKVKVE-----------KVGPG-IA 671
QK G + ++++ + RI + + + K KVE K P +
Sbjct: 235 DVCSIQKAGGEGVMSSVIMQCLRIASVKAADITSKIKSKVEDYTTTKALQKVKRTPALVP 294
Query: 672 DLISKSDI---EPSG-IKNQWVSSSDDESSAEDDKAETPRVQSVEDEGDEVMLVDSVNPR 727
+ D+ E +G ++NQ +S+D D T V+ + E E+ML +S NP
Sbjct: 295 KKVHVPDVAMKESTGALENQASKTSNDVQQISKDPPAT--VKDNKQEDVELMLTES-NPE 351
Query: 728 TKVREEVVLSGDSEE 742
K +G+++E
Sbjct: 352 VKSTSNSGAAGETDE 366
>gi|342320414|gb|EGU12354.1| Hypothetical Protein RTG_01376 [Rhodotorula glutinis ATCC 204091]
Length = 1080
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 23/171 (13%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGR------------------ 495
+ V+AQVS +V P RP EG + + E+SPMAS +E GR
Sbjct: 54 TRVVAQVSAEIVKPLPDRPYEGFVNLVTEISPMASAAYEAGRLRGGACACDGVSKRELTS 113
Query: 496 -----QTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCC 550
++ V++ R LEK + S +D E+LC+VA +KVW++RVD++ L+ +GNLL C
Sbjct: 114 TTARRASEDEVLMTRLLEKALRRSNTVDREALCIVAGQKVWSIRVDVHFLDDEGNLLDCA 173
Query: 551 SIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
SIAA+ AL HFR PDVT G+++ +HS E+ P+P+ I H P+ +++A F
Sbjct: 174 SIAAMTALRHFRKPDVTVVGEEVTVHSMTERVPVPLAIHHSPMCLTFAFFG 224
>gi|402592095|gb|EJW86024.1| hypothetical protein WUBG_03067, partial [Wuchereria bancrofti]
Length = 245
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 116/220 (52%), Gaps = 28/220 (12%)
Query: 211 VFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSF 270
+F D++VRDGE VCVELVA DR + ++VIFLGSIRY+ LK+ YDARTS S ++ Q+
Sbjct: 1 IFSDVVVRDGECVCVELVAKDRCKNCEAVIFLGSIRYEVLKQAYDARTSFSWQWAQK--- 57
Query: 271 GIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEP-------GYCET-DMW 322
F + R EFV+M+GP GKG+AEMAV + G ETP SE G C M
Sbjct: 58 --FITPNQRRREFVRMRGPHGKGYAEMAVMRLPNCGSETPLSEKSLNFEVLGQCGVRRMS 115
Query: 323 DSDWDDDPEDFYYYRHQRRLSDPSANINMFAKSIWKGPVNKTTAKAVSEDEGLDSLAHGV 382
D++ P+ S S N+ W+ + E +D +
Sbjct: 116 DTNLSHYPQRLMV------TSGLSDGHNVSRGRRWQSETDTLNQYREVEASSIDDVVF-- 167
Query: 383 AEIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQ 422
+R LD+G + LW++RGF Q +H+ +E +RA+
Sbjct: 168 -------VRLVLDEGMMSRLWSVRGFGQAWHWLREKRRAE 200
>gi|156032965|ref|XP_001585319.1| hypothetical protein SS1G_13558 [Sclerotinia sclerotiorum 1980]
gi|154698961|gb|EDN98699.1| hypothetical protein SS1G_13558 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 209
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 88/120 (73%)
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
MASP FET R T+ V+++R LEK + S +D ESLC++A +K W+VR D+++L++DGN
Sbjct: 1 MASPAFETNRPTEQEVLLSRLLEKTLRRSAALDTESLCLIAGQKCWSVRADVHILSHDGN 60
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
L+ IA +AAL HF+ PD ++ G+ + +++ AE++P+P+++LH+P+ ++++ + G E
Sbjct: 61 LIDASCIAIIAALQHFKKPDTSTEGETVTVYTLAEREPVPLSLLHFPLCVTFSFYGKGEE 120
>gi|357149443|ref|XP_003575114.1| PREDICTED: exosome complex component RRP45-like isoform 1
[Brachypodium distachyon]
Length = 336
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RP+EG L I E SPMA P FE GR + ++ + R +++ +E
Sbjct: 55 TRVMGYVTAQLVQPYKDRPSEGTLAIFTEFSPMADPAFEPGRPGEAAIELGRVIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D+ESLCVVA + VW++RVDL++L+ GNL+ +IAALAAL+ FR P+ T G+
Sbjct: 115 SRAVDMESLCVVAGKHVWSLRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGEDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 175 QQVTVHDPEVRDPLPLTIHHLPIAVTFAYFGDGN 208
>gi|149240693|ref|XP_001526201.1| hypothetical protein LELG_02759 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450324|gb|EDK44580.1| hypothetical protein LELG_02759 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 341
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 98/160 (61%), Gaps = 12/160 (7%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGR-QTDTSVMINRFLEKCFKESKC 516
++S ++ P RP EG+ IN+E+SPMAS +F+T R Q V+I+R +EK + S
Sbjct: 59 VRISASITKPYEDRPFEGIFVINSEISPMASLKFDTTRSQQQDEVLISRIIEKSIRRSNA 118
Query: 517 IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG------ 570
+DLE+LC++A E+ W + DLN NYDG ++ A + AL+HF+ PDV+ T
Sbjct: 119 LDLENLCIIAGEQCWEITADLNFWNYDGGMIDIGCFATMLALSHFKKPDVSITHGGFGGS 178
Query: 571 -----DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
+ +IIH E+ P+ ++ILH P+ ++Y+ FN GS+
Sbjct: 179 GNGGVNGVIIHDVNERQPVGLSILHIPICLTYSFFNLGSK 218
>gi|384250786|gb|EIE24265.1| exoribonuclease PH component of the exosome [Coccomyxa
subellipsoidea C-169]
Length = 293
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 98/157 (62%), Gaps = 7/157 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ ++ + P RPNEG + N E SPMASP F+ GR + ++ + R LE+ F++
Sbjct: 20 TKVMTVITPTLTAPYEDRPNEGAVRFNVEYSPMASPSFQAGRPGEAAIEVTRLLERAFRD 79
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD--VTSTGD 571
S+ ID E+LCV+A +VW++ +D++VL+ GNL C + LAAL FR PD V + G
Sbjct: 80 SRAIDQEALCVLAGHRVWSLSIDVHVLDNGGNLADACMLCTLAALMAFRRPDTEVAAGGA 139
Query: 572 Q-----IIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ + + S + ++P+P+++ H P+ IS+A F G
Sbjct: 140 ESGRARVTVLSPSAREPVPLSLHHLPLGISFAFFEDG 176
>gi|50546251|ref|XP_500645.1| YALI0B08514p [Yarrowia lipolytica]
gi|49646511|emb|CAG82887.1| YALI0B08514p [Yarrowia lipolytica CLIB122]
Length = 299
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 101/169 (59%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ ++S + P RP EG+ ++ ++ MASP FE Q++ +MI++ +EK +
Sbjct: 49 TKVVVRISAEITKPNERRPFEGIFVVHTDIGSMASPIFENNHQSEQEIMISQVVEKAVRR 108
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLESLC+VA +K W +R D++ L++DG L+ A +A L HF+ PDV G +
Sbjct: 109 SGALDLESLCIVAGKKCWEIRADVHYLDFDGGLVDATCAAVMAGLYHFKKPDVDVDGGAV 168
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTAL 622
+ E+ P+ +++LH PV+++Y +F ++ + EC+ TA+
Sbjct: 169 TVCDMEERHPVALSVLHLPVSVTYGLFELKNDETNEVEKVECVLDCTAI 217
>gi|328705174|ref|XP_003242720.1| PREDICTED: hypothetical protein LOC100569654 [Acyrthosiphon pisum]
Length = 1060
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 98/210 (46%), Gaps = 53/210 (25%)
Query: 74 YWTDLFVRYFLF-----QTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRK 128
+WTD+F+RYF+F +T + D DDLLFFVR++ K D+R
Sbjct: 102 WWTDVFLRYFVFDEDCTRTATTADSDDLLFFVRRRRNKRKCTKRRLSSQRRRRVTYDTRA 161
Query: 129 --------------------LPIGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPK-- 166
LPIGDP V W TV LN I+H+ YTLT+A+C R K
Sbjct: 162 YRKQQHNQQQQQQQQQKPTMLPIGDPAVLWRHTVCLNAIVHRLRYTLTVAVCARVPRKAA 221
Query: 167 -------------------------HLQVLKRHSQKVYASPSRRRMD-TKGEVEEMTYPC 200
LQ+L RH VYAS S RRMD KG E YP
Sbjct: 222 ASACFSGYDGSREFVSADRQEDCEYDLQLLSRHVHTVYASTSGRRMDAAKGPRERPVYPA 281
Query: 201 VCFTVDNFNEVFHDILVRDGEMVCVELVAS 230
+C+ VD+F E F ++VR G+ VC ELVA+
Sbjct: 282 LCWAVDDFAEAFRTVVVRPGQTVCAELVAA 311
>gi|18399822|ref|NP_566441.1| ribonuclease PH45A [Arabidopsis thaliana]
gi|79313209|ref|NP_001030684.1| ribonuclease PH45A [Arabidopsis thaliana]
gi|334185300|ref|NP_001189874.1| ribonuclease PH45A [Arabidopsis thaliana]
gi|15795131|dbj|BAB02509.1| nucleolar autoantigen-like protein [Arabidopsis thaliana]
gi|27765042|gb|AAO23642.1| At3g12990 [Arabidopsis thaliana]
gi|110742714|dbj|BAE99268.1| hypothetical protein [Arabidopsis thaliana]
gi|332641750|gb|AEE75271.1| ribonuclease PH45A [Arabidopsis thaliana]
gi|332641751|gb|AEE75272.1| ribonuclease PH45A [Arabidopsis thaliana]
gi|332641752|gb|AEE75273.1| ribonuclease PH45A [Arabidopsis thaliana]
Length = 307
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 102/164 (62%), Gaps = 3/164 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V+ +V P RP+EG I E SPMA P FE G +++V + R +++ +E
Sbjct: 58 THVMAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ- 572
S+ +D ESLCV+A + VW+VR+DL++L+ GNL+ ++AALAAL FR PD T GD
Sbjct: 118 SRAVDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNS 177
Query: 573 --IIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE 614
+IIH E++P+P+ I H P+ ++ FN GS P + E
Sbjct: 178 QDVIIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVE 221
>gi|21536581|gb|AAM60913.1| nucleolar autoantigen-like protein [Arabidopsis thaliana]
Length = 307
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 102/164 (62%), Gaps = 3/164 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V+ +V P RP+EG I E SPMA P FE G +++V + R +++ +E
Sbjct: 58 THVMAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ- 572
S+ +D ESLCV+A + VW+VR+DL++L+ GNL+ ++AALAAL FR PD T GD
Sbjct: 118 SRAVDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNS 177
Query: 573 --IIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE 614
+IIH E++P+P+ I H P+ ++ FN GS P + E
Sbjct: 178 QDVIIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVE 221
>gi|449544735|gb|EMD35707.1| hypothetical protein CERSUDRAFT_115670 [Ceriporiopsis subvermispora
B]
Length = 283
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 3/157 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLAQV MV P RP EG++ I++E+SPMAS +E GR +D V I R L+K +
Sbjct: 54 TRVLAQVDAKMVKPLPERPLEGIITIHSEISPMASSDYEPGRPSDEEVTITRMLDKVLRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A ++VW++R+ ++ L GN+L C +A + A HFR P+V G+++
Sbjct: 114 SDVVDKESLCILAGQRVWHLRLTIHCLADAGNMLDCACLAGVIAFKHFRRPEVEVVGEEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVP 610
+H +E+ P+P+++ H P +++A F + ST P
Sbjct: 174 TVHHPSERAPVPLSMHHTPYCLTFAYF---PDTSTAP 207
>gi|320165478|gb|EFW42377.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 522
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 120/214 (56%), Gaps = 32/214 (14%)
Query: 123 RKDSRKLPIG-DPDVDWEETVYLNMIIHQFDYTLTLAICTRT------------------ 163
R+ + + P D ++WEET YLN+I++QF+Y+LT+AIC RT
Sbjct: 192 RRSNHQQPAPFDRAINWEETFYLNLILNQFEYSLTVAIC-RTVKEPIPIVAGAPAAVPGQ 250
Query: 164 SPK---HLQVLKRHSQKVYASPSRRRMDT-KGEVEEMTYPCVCFTVDNFNEVFHDILVRD 219
P+ L + K+ +Q+VY SPS+R MD+ K E E+TYP + FTVDNF+E+F ++ + +
Sbjct: 251 PPRTRDRLVIHKKVTQRVYPSPSKRNMDSGKAEETELTYPHIFFTVDNFDEIFSEVYIVE 310
Query: 220 GEMVCVELVA-SDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSN 278
E +C+E+VA + KS +F GS+ Y AL Y A+ S + S
Sbjct: 311 DECLCLEMVAWPHGSPEQKSTVFQGSVVYAALLNAYQAKVKKSTPL-----YLSLLARSR 365
Query: 279 SRIEFVKMKGPQGKGFAEMAVTK--PKGYGVETP 310
+EF+ ++GP GKG A++A+++ P G G P
Sbjct: 366 GDVEFLMLRGPGGKGEAQVAMSRLLPHGSGSSLP 399
>gi|449442545|ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
Length = 452
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 5/165 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR +++V + R +++ +E
Sbjct: 58 THVMGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D ESLCVV+ + VW +RVDL++L+ GNL+ ++AALAAL+ FR P+ + +GD
Sbjct: 118 SRAVDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDG 177
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTEC 615
++I+H ++P+P+ I H P+ +++A F SE V T C
Sbjct: 178 QEVIVHPPEVREPLPLIIHHLPIAVTFAFFR--SESILVIDPTHC 220
>gi|449526860|ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
Length = 454
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 5/165 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I E SPMA P FE GR +++V + R +++ +E
Sbjct: 58 THVMGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D ESLCVV+ + VW +RVDL++L+ GNL+ ++AALAAL+ FR P+ + +GD
Sbjct: 118 SRAVDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDG 177
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTEC 615
++I+H ++P+P+ I H P+ +++A F SE V T C
Sbjct: 178 QEVIVHPPEVREPLPLIIHHLPIAVTFAFFR--SESILVIDPTHC 220
>gi|255580609|ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
gi|223529292|gb|EEF31262.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
Length = 463
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 100/151 (66%), Gaps = 3/151 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P RPNEG L I +E SPMA P FE GR +++V + R +++ +E
Sbjct: 58 THVMGFVTSQLVQPYRDRPNEGSLSIFSEFSPMADPSFEPGRPGESAVELGRIIDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D ESLCV+A + VW +R+DL++L+ GNL+ +IAALAAL FR P+ T G+
Sbjct: 118 SRAVDTESLCVLAGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGEDG 177
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
Q+I+H K+P+P+ + H P+ +++A F+
Sbjct: 178 QQVIVHPPEVKEPLPLIVHHLPIAVTFAFFS 208
>gi|159490978|ref|XP_001703450.1| 3'-5' exoribonuclease PH component of the exosome [Chlamydomonas
reinhardtii]
gi|158280374|gb|EDP06132.1| 3'-5' exoribonuclease PH component of the exosome [Chlamydomonas
reinhardtii]
Length = 296
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 4/154 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A VS + P RP+EG L N E SPMASP FE G+ + ++ + R +E+ ++
Sbjct: 57 TRVMAVVSAALEAPYPDRPSEGPLRFNVEFSPMASPAFEPGKPGEDAIQVARLIERGLRQ 116
Query: 514 SKCIDLESLCVVAEE-KVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV---TST 569
S +D E+L V A +VW +RVD +VL++ GNLL CC +AALAAL FR P+V +
Sbjct: 117 SGAVDQEALWVGAGRVRVWALRVDCHVLDHGGNLLDCCFLAALAALMAFRKPEVEVGGES 176
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
G +II+H ++P+P+TI H PV +++A+F G
Sbjct: 177 GSEIIVHPPEVREPVPLTIHHLPVAVTFALFQAG 210
>gi|258574161|ref|XP_002541262.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901528|gb|EEP75929.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 282
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 95/148 (64%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V+ ++S + P+ R ++G+ ++ EL+ MA P FETGRQ+D+ ++R L+K + S
Sbjct: 46 VIVRISAEVTAPRPERESDGIFTVSIELNDMAIPGFETGRQSDSETQLSRTLDKIVRRSN 105
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+D ESLC+ WNVR D+++++ DG L+ C +A +AAL HFR P+ T ++ +
Sbjct: 106 ALDTESLCIAKGLSCWNVRADVHIVDADGGLVDICCLAIMAALLHFRLPESTVRDGKVTV 165
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGG 603
+SA EK P+P+ + P+++++ +++ G
Sbjct: 166 YSAEEKVPVPLNLTKVPLSVTFNLYDEG 193
>gi|390595104|gb|EIN04511.1| ribosomal protein S5 domain 2-like protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 290
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 98/155 (63%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A + +V P RP EG++ I++E+SPMAS ++E GR ++ V I R L+K +
Sbjct: 53 TKVMAHIESRLVRPPPERPYEGIISIHSEVSPMASSEYEAGRPSEEEVTITRMLDKVIRR 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A + VW++R+ L+ L GN+L C +A++ AL HFR P+V G+ +
Sbjct: 113 SDTVDKESLCILAGQVVWHLRLTLHFLADAGNVLDCACLASIVALRHFRRPEVEVVGEDV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGST 608
++H E+ P+P+ + H P ++A F+ S +
Sbjct: 173 VLHQPDERAPVPLAMHHTPFCFTFAFFHPPSSSTV 207
>gi|224054532|ref|XP_002298307.1| predicted protein [Populus trichocarpa]
gi|222845565|gb|EEE83112.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ +V P R NEG+L I E SPMA P FE GR +++V + R +++ +E
Sbjct: 60 THVMGFVTGQLVQPYQDRRNEGMLLIFTEFSPMADPSFEPGRPGESAVELGRIVDRGLRE 119
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D ESLCV++ + VW +R+DL++L+ GNL+ +IAALAAL FR P+ T GD
Sbjct: 120 SRAVDTESLCVLSGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGDDG 179
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
++ +H E++P+P+ + H P+ I++A GSEG V
Sbjct: 180 QEVTVHPPEEREPLPLIVHHLPIAITFAFL--GSEGKMV 216
>gi|169783852|ref|XP_001826388.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Aspergillus oryzae RIB40]
gi|238493679|ref|XP_002378076.1| exosome complex endonuclease 2, putative [Aspergillus flavus
NRRL3357]
gi|83775132|dbj|BAE65255.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220696570|gb|EED52912.1| exosome complex endonuclease 2, putative [Aspergillus flavus
NRRL3357]
gi|391869452|gb|EIT78650.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp45 [Aspergillus
oryzae 3.042]
Length = 292
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 86/150 (57%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P RP +G+ I EL+ M SP +E GRQ D ++ L++ +
Sbjct: 54 TSLIVRISSEVTKPHDDRPFDGIFTIALELTAMGSPAWENGRQGDLETYVSNVLDRVIRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLCV+ WNVR D+++ NYDGNL+ I +A L HFR PD Q+
Sbjct: 114 SNALDTESLCVLKGVSCWNVRADVHITNYDGNLIDAACIGVMAGLQHFRRPDAVVKDGQV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
I++ E+ P+ + I H P+++++ F+ G
Sbjct: 174 IVYGVDERVPVALNITHKPLSVTFHTFDEG 203
>gi|440637012|gb|ELR06931.1| hypothetical protein GMDG_02301 [Geomyces destructans 20631-21]
Length = 252
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 423 DWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAE 482
D DV+ + + S+ + G+ + VLA +SC++ P RP +G+ + E
Sbjct: 32 DARDVEITFGDAYGSVDVQMGK---------TRVLATISCSLSPPSPPRPFDGIFTLTTE 82
Query: 483 LSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNY 542
SPMA+P + R + ++ R L+K + S +D ESLC++A + VW + DL++L++
Sbjct: 83 FSPMATPTVDPSRPSPPETLLARLLDKTLRRSAALDTESLCLLAGKSVWAICCDLHILSH 142
Query: 543 DGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
G LL C +AALA L HFR P+V+ G+++ I+SA E+ P+P+++LH P +++++F
Sbjct: 143 GGGLLDACCVAALAGLLHFRRPEVSVEGEKVTIYSAEERAPVPLSLLHLPFCVTFSIFG 201
>gi|125539848|gb|EAY86243.1| hypothetical protein OsI_07612 [Oryza sativa Indica Group]
Length = 408
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 16/167 (9%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ + +V P RPNEG L I E SPMA P FE GR ++++ + R +++ +E
Sbjct: 56 TRVMGYATAQLVQPYKDRPNEGTLAIFTEFSPMADPAFEPGRPGESAIELGRVVDRGLRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDG-------------NLLGCCSIAALAALAH 560
S+ +D+ESLCVVA + VW+VRVDL++L+ G NL+ +IAALAAL+
Sbjct: 116 SRAVDMESLCVVAGKHVWSVRVDLHILDNGGELNVPDAMVLSLRNLIDAANIAALAALST 175
Query: 561 FRHPDVTSTGD---QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
FR P+ T G+ Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 176 FRRPECTVGGEDGQQVTVHDPEVRDPLPLTIHHLPIAVTFAYFGEGN 222
>gi|302757249|ref|XP_002962048.1| hypothetical protein SELMODRAFT_77552 [Selaginella moellendorffii]
gi|302775248|ref|XP_002971041.1| hypothetical protein SELMODRAFT_94605 [Selaginella moellendorffii]
gi|300161023|gb|EFJ27639.1| hypothetical protein SELMODRAFT_94605 [Selaginella moellendorffii]
gi|300170707|gb|EFJ37308.1| hypothetical protein SELMODRAFT_77552 [Selaginella moellendorffii]
Length = 377
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA VS + P RPNEG L IN E SPMA P FE GR + +V + R +++ +E
Sbjct: 54 TRVLAVVSAQLGTPYPDRPNEGSLVINTEFSPMADPSFEPGRPGELAVELGRVIDRGLRE 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STG 570
S+ +D ESLCV+A + VW +R+D+++L+ GNL+ ++AALA L FR P+ + + G
Sbjct: 114 SRAVDTESLCVLAGKAVWFLRIDIHILDNGGNLIDVANLAALAGLLSFRRPECSIGGADG 173
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
I IH ++P+P+T+ H P+ +++ G
Sbjct: 174 QDITIHPPEVREPLPLTLHHLPIAVTFGFLADG 206
>gi|118486664|gb|ABK95169.1| unknown [Populus trichocarpa]
Length = 403
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 99/153 (64%), Gaps = 5/153 (3%)
Query: 460 VSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDL 519
V+ +V P R NEG+L I E SPMA P FE GR +++V + R +++ +ES+ +D
Sbjct: 4 VTGQLVQPYQDRRNEGMLLIFTEFSPMADPSFEPGRPGESAVELGRIVDRGLRESRAVDT 63
Query: 520 ESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD---QIIIH 576
ESLCV++ + VW +R+DL++L+ GNL+ +IAALAAL FR P+ T GD ++ +H
Sbjct: 64 ESLCVLSGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGDDGQEVTVH 123
Query: 577 SAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV 609
E++P+P+ + H P+ I++A GSEG V
Sbjct: 124 PPEEREPLPLIVHHLPIAITFAFL--GSEGKMV 154
>gi|398404486|ref|XP_003853709.1| hypothetical protein MYCGRDRAFT_108491 [Zymoseptoria tritici
IPO323]
gi|339473592|gb|EGP88685.1| hypothetical protein MYCGRDRAFT_108491 [Zymoseptoria tritici
IPO323]
Length = 292
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 96/150 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ +S ++ P R +G+ I+ ELSP+ASP FE GRQ T ++++R LEK +
Sbjct: 54 TRVMVAISAEVIAPYTDRKFDGVFTISTELSPIASPAFEVGRQDQTEILLSRLLEKTIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++A K +++R D++VL++DGN++ +A +AAL HFR PD+ G+++
Sbjct: 114 SGALDTESLCIIAGSKCFHIRADIHVLDHDGNIIDAACVALVAALMHFRRPDIEIHGEEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ S E++P+ + + H P I+ + + G
Sbjct: 174 TVFSLQEREPVKLQMQHQPFCITTSYYESG 203
>gi|121698408|ref|XP_001267812.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Aspergillus clavatus NRRL 1]
gi|119395954|gb|EAW06386.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Aspergillus clavatus NRRL 1]
Length = 292
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P+ RP +GL I EL+ M SP ++ GRQ D + L++ +
Sbjct: 54 TSLIVRISSEVTKPRDDRPFDGLFAIALELTAMGSPAWDNGRQGDLEAYVAHVLDRVVRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ W++R D+++ +YDGNL+ I +A L HFR PD Q+
Sbjct: 114 SNALDTESLCILKGVSCWSIRADIHITDYDGNLIDAACIGVMAGLQHFRRPDAVVKDGQV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
I++ E+ P+P+ I H P+++++ F+ G
Sbjct: 174 IVYGLDERVPVPLNITHKPLSVTFHTFDEG 203
>gi|303312521|ref|XP_003066272.1| 3' exoribonuclease family, domain 1 containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240105934|gb|EER24127.1| 3' exoribonuclease family, domain 1 containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 292
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 94/150 (62%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + P+ R ++G+ ++ EL+ MA P FETGRQ+D ++R L+K +
Sbjct: 54 TSVIVRISAEVTAPRPERDSDGIFTVSIELNDMALPGFETGRQSDLETQLSRTLDKIVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ WNVR D+++++ DG L+ C +A +A L HFR P+ T + ++
Sbjct: 114 SNALDTESLCIAKGLSCWNVRADVHIVDADGGLVDICCLAIMAGLLHFRIPESTVSDGKV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
++S EK P+P+ + P++I++ +++ G
Sbjct: 174 TVYSPEEKVPVPLNLTKVPLSITFNLYDEG 203
>gi|119192860|ref|XP_001247036.1| hypothetical protein CIMG_00807 [Coccidioides immitis RS]
gi|392863730|gb|EAS35502.2| exosome complex endonuclease 2/ribosomal RNA processing protein
[Coccidioides immitis RS]
Length = 292
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 93/148 (62%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V+ ++S + P+ R ++G+ ++ EL+ MA P FETGRQ+D ++R L+K + S
Sbjct: 56 VIVRISAEVTAPRPERDSDGIFTVSIELNDMALPGFETGRQSDLETQLSRTLDKIVRRSN 115
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+D ESLC+ WNVR D+++++ DG L+ C +A +A L HFR P+ T + ++ +
Sbjct: 116 ALDTESLCIAKGLSCWNVRADVHIVDADGGLVDICCLAIMAGLLHFRIPESTVSDGKVTV 175
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGG 603
+S EK P+P+ + P++I++ +++ G
Sbjct: 176 YSPEEKVPVPLNLTKVPLSITFNLYDEG 203
>gi|320033639|gb|EFW15586.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Coccidioides posadasii str. Silveira]
Length = 265
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 94/150 (62%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + P+ R ++G+ ++ EL+ MA P FETGRQ+D ++R L+K +
Sbjct: 54 TSVIVRISAEVTAPRPERDSDGIFTVSIELNDMALPGFETGRQSDLETQLSRTLDKIVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ WNVR D+++++ DG L+ C +A +A L HFR P+ T + ++
Sbjct: 114 SNALDTESLCIAKGLSCWNVRADVHIVDADGGLVDICCLAIMAGLLHFRIPESTVSDGKV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
++S EK P+P+ + P++I++ +++ G
Sbjct: 174 TVYSPEEKVPVPLNLTKVPLSITFNLYDEG 203
>gi|326428882|gb|EGD74452.1| hypothetical protein PTSG_05816 [Salpingoeca sp. ATCC 50818]
Length = 280
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 106/175 (60%), Gaps = 1/175 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETG-RQTDTSVMINRFLEKCFK 512
++ + +VSC++V P RP +G + LSPMASP ++ G R + S+ + R LE F+
Sbjct: 60 TQAICRVSCSIVRPHEDRPTKGFVRYGVTLSPMASPDYDAGGRPSAASIYLTRLLEHIFR 119
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
E++ +D ESLC+VA EKVW V V++ V N DGN+ C++AALA L HFR P V+ G
Sbjct: 120 EARALDDESLCIVAGEKVWAVSVNVTVTNDDGNMEDACALAALAGLMHFRRPYVSIAGQD 179
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQD 627
+++H E +P+ + I H P+ ++ A+F+ G P E D +++++ +
Sbjct: 180 VVVHPFDEHEPVSLAINHRPLNVTTALFDNGDLALVDPTKIELKVADGSISVAMN 234
>gi|147779414|emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
Length = 476
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 106/168 (63%), Gaps = 5/168 (2%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
+I AE+G + + + V+ V+ ++ P RPNEG L I E SPMA P FE GR
Sbjct: 52 TICAEDGSSEV--QLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRP 109
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ +V + R +++ +ES+ +D+ESLCV+A + VW++R+DL++++ GNL+ +IAALA
Sbjct: 110 GEAAVELGRVIDRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALA 169
Query: 557 ALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
AL FR P+ + G ++I+H ++P+P+ + H P+ +++A+
Sbjct: 170 ALLTFRRPECSFGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIG 217
>gi|71001078|ref|XP_755220.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Aspergillus fumigatus Af293]
gi|66852858|gb|EAL93182.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Aspergillus fumigatus Af293]
gi|159129307|gb|EDP54421.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Aspergillus fumigatus A1163]
Length = 292
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 86/148 (58%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
++ ++S + P+ RP +G+ I EL+ M SP ++ GRQ D + L++ + S
Sbjct: 56 LIVRISSEVTKPRDDRPFDGIFTIALELTAMGSPAWDNGRQGDLEAYVAHVLDRLVRHSN 115
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+D ESLC++ W++R D++V +YDGNL+ I +A L HFR PD Q+I+
Sbjct: 116 ALDTESLCILKGVSCWSIRADVHVTDYDGNLVDAACIGVMAGLQHFRRPDAVVKDGQVIV 175
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ E+ P+P+ I H P+++++ F+ G
Sbjct: 176 YGLDERVPVPLNITHKPLSVTFHTFDEG 203
>gi|119480721|ref|XP_001260389.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Neosartorya fischeri NRRL 181]
gi|119408543|gb|EAW18492.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Neosartorya fischeri NRRL 181]
Length = 292
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 87/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P+ RP +G+ I EL+ M SP ++ GRQ D + L++ +
Sbjct: 54 TSLIVRISSEVTKPRDDRPFDGIFTIALELTAMGSPAWDNGRQGDLEAYVAHVLDRLVRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ W++R D++V +YDGNL+ I +A L HFR PD Q+
Sbjct: 114 SNALDTESLCILKGVSCWSIRADVHVTDYDGNLIDAACIGVMAGLQHFRRPDAVVKDGQV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+++ E+ P+P+ I H P+++++ F+ G
Sbjct: 174 VVYGLDERVPVPLNITHKPLSVTFHTFDEG 203
>gi|225460698|ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
Length = 467
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 98/150 (65%), Gaps = 3/150 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V+ ++ P RPNEG L I E SPMA P FE GR + +V + R +++ +E
Sbjct: 58 THVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STG 570
S+ +D+ESLCV+A + VW++R+DL++++ GNL+ +IAALAAL FR P+ + G
Sbjct: 118 SRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECSFGGEDG 177
Query: 571 DQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
++I+H ++P+P+ + H P+ +++A+
Sbjct: 178 QELIVHPPEVREPLPLIVHHLPIAVTFAII 207
>gi|388579995|gb|EIM20313.1| exosome complex exonuclease rrp45 [Wallemia sebi CBS 633.66]
Length = 286
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
Query: 415 WKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSE--VLAQVSCNMVIPKATRP 472
KE+KR +D S I + G+ + +K E V++ VSC + P RP
Sbjct: 19 LKENKR------LDGRSLLEGRPIEIQFGKPLGSVTIKLGECSVMSSVSCTVTQPTPERP 72
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTS---VMINRFLEKCFKESKCIDLESLCVVAEEK 529
EG L I++ELS M +P +E G + +T+ +NR L+K + S +D E+LC++ EK
Sbjct: 73 YEGQLNISSELSAMTTPFYEPGMRGNTAEEEATLNRQLDKAIRRSGMVDREALCIIGGEK 132
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTIL 589
VW++ + L+ ++ DGNL+ IAA AAL HFR PD T G+++ HS E+ P+P+ I
Sbjct: 133 VWSLNLTLHYISDDGNLIDAGVIAAAAALLHFRRPDATVIGNEVTYHSEDERVPVPLAIN 192
Query: 590 HYPVTISYAVFN 601
H P++ SY F+
Sbjct: 193 HTPISFSYVFFD 204
>gi|222623035|gb|EEE57167.1| hypothetical protein OsJ_07096 [Oryza sativa Japonica Group]
Length = 417
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 102/167 (61%), Gaps = 16/167 (9%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ + +V P RPN+G L I E SP+A P FE GR ++++ + R +++ +E
Sbjct: 65 TRVMGYATAQLVQPYKDRPNQGTLAIFTEFSPIADPAFEPGRPGESAIELGRVVDRGLRE 124
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDG-------------NLLGCCSIAALAALAH 560
S+ +D+ESLCVVA + VW+VRVDL++L+ G NL+ +IAALAAL+
Sbjct: 125 SRAVDMESLCVVAGKHVWSVRVDLHILDNGGELNVPDAMVLSLRNLIDAANIAALAALST 184
Query: 561 FRHPDVTSTGD---QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
FR P+ T G+ Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 185 FRRPECTVGGEDGQQVTVHDPEVRDPLPLTIHHLPIAVTFAYFGEGN 231
>gi|213410258|ref|XP_002175899.1| exosome subunit Rrp45 [Schizosaccharomyces japonicus yFS275]
gi|212003946|gb|EEB09606.1| exosome subunit Rrp45 [Schizosaccharomyces japonicus yFS275]
Length = 291
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 101/151 (66%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL ++ + P +P +G+ I+ EL+PMA P E GR +D V+I+R +E +
Sbjct: 54 TRVLCHITAQIAKPYPDKPFDGIFTIHTELTPMAHPSLEAGRLSDQEVLISRLIETSVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +D ESLC+++ +K W+VR ++ +N+DGN++ +A +AAL H+R PDVT TG+++
Sbjct: 114 SRALDTESLCILSGQKCWSVRATVHFVNHDGNMVDAACLAVVAALCHYRRPDVTVTGEEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
++HS E+ P+P+++LH P+ ++ F+ GS
Sbjct: 174 VVHSPEERVPVPLSVLHMPICTTFFFFHDGS 204
>gi|255935559|ref|XP_002558806.1| Pc13g03690 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583426|emb|CAP91438.1| Pc13g03690 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 297
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 86/148 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P+ RP +GL IN EL+ M SP +E+GR D L++ +
Sbjct: 54 TNIIVRISAEVTKPREDRPFDGLFNINLELTAMGSPAWESGRTNDIEAYATNTLDRIIRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ W++R D++V++YDGN+ IA +A L HFR PD ++
Sbjct: 114 SNALDTESLCILKGVSCWSIRADVHVIDYDGNITDAACIAIMAGLQHFRRPDAVVRDGRV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
I++ ++ P+ + I H P+++++ FN
Sbjct: 174 IVYGVEQRVPVALNITHKPLSVTFHTFN 201
>gi|67539882|ref|XP_663715.1| hypothetical protein AN6111.2 [Aspergillus nidulans FGSC A4]
gi|40738896|gb|EAA58086.1| hypothetical protein AN6111.2 [Aspergillus nidulans FGSC A4]
gi|259479699|tpe|CBF70162.1| TPA: exosome complex endonuclease 2/ribosomal RNA processing
protein, putative (AFU_orthologue; AFUA_2G08860)
[Aspergillus nidulans FGSC A4]
Length = 295
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 84/150 (56%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P RP +G+ I EL+ M SP +E GRQ D + L++ +
Sbjct: 54 TSLVVRISAEVAKPHDDRPFDGIFNIAMELTAMGSPAWENGRQGDLETYVTNVLDRVIRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ W +R D+++ +YDGNL+ I +A L HFR PD Q+
Sbjct: 114 SNALDTESLCILKGVSCWTIRADVHITDYDGNLIDASCIGVMAGLQHFRRPDAVVKDGQV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
I++ E+ P P+ I H P+++++ F+ G
Sbjct: 174 IVYGLDERVPAPLNITHKPLSVTFHTFDDG 203
>gi|425766655|gb|EKV05258.1| Exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Penicillium digitatum Pd1]
gi|425775306|gb|EKV13584.1| Exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Penicillium digitatum PHI26]
Length = 324
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 85/148 (57%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P+ RP +GL IN ELS M SP +E GR D L++ +
Sbjct: 81 TNLIVRISAEVTKPREDRPFDGLFNINLELSAMGSPAWENGRTNDIEAYATNALDRIIRH 140
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ W++R D+++++YDGN+ IA +A L HFR PD ++
Sbjct: 141 SNALDTESLCILKGVSCWSIRADIHIIDYDGNITDAACIAIMAGLQHFRRPDAVVRDGRV 200
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
I++ ++ P+ + I H P+++++ FN
Sbjct: 201 IVYGVEQRVPVALNITHKPLSVTFHTFN 228
>gi|115443084|ref|XP_001218349.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188218|gb|EAU29918.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 294
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
++ ++S + P+ RP +G+ I EL+ M SP ++ GRQ D + L++ + S
Sbjct: 58 LIVRISSEVTKPRDDRPFDGIFTIALELTAMGSPAWDNGRQGDLETYVTNVLDRVVRHSN 117
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+D ESLC++ W+VR D+++ +YDGNL+ I +A L HFR PD Q+I+
Sbjct: 118 ALDTESLCILKGVSCWSVRADVHITDYDGNLIDAACIGVMAGLQHFRRPDAVVKDGQVIV 177
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
+ E+ P+ + I H P+++++ F+ G+
Sbjct: 178 YGVDERVPVALNITHKPLSVTFHTFDEGNH 207
>gi|296081159|emb|CBI18185.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 95/144 (65%), Gaps = 3/144 (2%)
Query: 460 VSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDL 519
V+ ++ P RPNEG L I E SPMA P FE GR + +V + R +++ +ES+ +D+
Sbjct: 4 VTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRAVDM 63
Query: 520 ESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIH 576
ESLCV+A + VW++R+DL++++ GNL+ +IAALAAL FR P+ + G ++I+H
Sbjct: 64 ESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECSFGGEDGQELIVH 123
Query: 577 SAAEKDPIPMTILHYPVTISYAVF 600
++P+P+ + H P+ +++A+
Sbjct: 124 PPEVREPLPLIVHHLPIAVTFAII 147
>gi|212532847|ref|XP_002146580.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Talaromyces marneffei ATCC 18224]
gi|210071944|gb|EEA26033.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Talaromyces marneffei ATCC 18224]
Length = 294
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P+ R ++G I EL+ M SP +E RQ++ ++R L++ +
Sbjct: 54 TSLVVRISAEVSKPRDDRQSDGTFLIAMELTAMGSPAWENLRQSEFETYVSRVLDRVIRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ + WN+R D++V N+DGNL+ I +A L HFR PD+ Q+
Sbjct: 114 SNALDTESLCILKGKSCWNIRADVHVTNFDGNLIDSACIGIMAGLQHFRRPDIEVKDGQV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ E+ P+P+ I H P+ I++ F+ G
Sbjct: 174 TVFGINERVPVPLNITHKPLAITFQSFHEG 203
>gi|242776727|ref|XP_002478890.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Talaromyces stipitatus ATCC 10500]
gi|218722509|gb|EED21927.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Talaromyces stipitatus ATCC 10500]
Length = 252
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 87/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S ++ ++S + P+ R ++G I EL+ M SP +E RQ + ++R L++ +
Sbjct: 12 SSLVVRISAEVSRPRDDRQSDGTFLIAMELTAMGSPAWENLRQNELETYVSRVLDRVIRH 71
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ + WN+R D++V +YDGNL+ I +A L HFR PD+ Q+
Sbjct: 72 SNALDTESLCILKGKSCWNIRADVHVTDYDGNLIDSACIGIMAGLQHFRRPDIEVKDGQV 131
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ E+ P+P+ I H P++I++ F+ G
Sbjct: 132 RVFGINERVPVPLNITHKPLSITFQSFHEG 161
>gi|29841302|gb|AAP06334.1| similar to GenBank Accession Number AE003804 CG9646 gene product in
Drosophila melanogaster [Schistosoma japonicum]
Length = 214
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 105/183 (57%), Gaps = 14/183 (7%)
Query: 28 VNIGEDESILKSTTTLEQLLEEINFQRAKEKRQYLRNDM---FLTQGTSYWTDLFVRYFL 84
VN G +I TL +L+ I QR L++ + +W LF + FL
Sbjct: 13 VNTGISNNIPPGNITLHSILKMIIRQRGLYTENILKDGFDGAVINSHNDFWFGLFTQAFL 72
Query: 85 FQT-DSNIDC--DDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-IGDPDVDWEE 140
+S++D DDLLF+V ++K ++ + E+ VFR++S LP + D +DWEE
Sbjct: 73 SPALESSVDGPGDDLLFYVH--HLKQNNE-----KPELSVFRRNSSNLPKLTDDYIDWEE 125
Query: 141 TVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGEVEEMTYPC 200
TVYLN+++ F Y +T+A+CTRT P+ Q+LK+ S VY+SPS R+M+ KG E++ YP
Sbjct: 126 TVYLNLLMQYFVYVVTIAVCTRTGPQEWQILKKFSHTVYSSPSHRQMNVKGSYEQIAYPD 185
Query: 201 VCF 203
+ F
Sbjct: 186 LYF 188
>gi|403220409|dbj|BAM38542.1| exosome complex exonuclease [Theileria orientalis strain Shintoku]
Length = 296
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 89/147 (60%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V +S +V P RPNEG L+ N ELSP S ++ G+ +D+ + FLE FKES
Sbjct: 65 VFCCISQEIVEPNFERPNEGFLYFNVELSPFTSENYDPGKTSDSENNLIYFLENIFKESS 124
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DLE+LCV + ++VW +RV ++VL DGNLLG CS AALA+L+ +R P++ + +
Sbjct: 125 FLDLETLCVKSGKEVWALRVYVHVLQDDGNLLGACSFAALASLSQYRKPNLQESEEFTYS 184
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNG 602
+P++I + P+ ++ ++ G
Sbjct: 185 SYMLWHKGVPLSIYNMPIMMTVSIMEG 211
>gi|255075435|ref|XP_002501392.1| predicted protein [Micromonas sp. RCC299]
gi|226516656|gb|ACO62650.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA VS + P R NEG + IN E SPMASP FE GR + + + LE+ +E
Sbjct: 56 TRVLAVVSAKLEPPSGARGNEGTITINVEFSPMASPNFEPGRPGEQAQELALVLERAIRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ- 572
+ +D+ESLCV+A +VW+VR D++VL+ GN+ G S+AA AAL FR P+ T + D
Sbjct: 116 TGAVDVESLCVLAGRRVWHVRCDVHVLDACGNIAGAASLAADAALLSFRRPEATVSPDTQ 175
Query: 573 -IIIHSAAEKDPIPMTILHYPVTISYAVF 600
I +H A ++P+P+ + H PV I++ F
Sbjct: 176 LITVHPADVREPVPLALHHLPVAITFGYF 204
>gi|168031159|ref|XP_001768089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680727|gb|EDQ67161.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 276
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 96/154 (62%), Gaps = 3/154 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA V + P R NEG L I E SPM P FE GR ++ +V + R +++ +E
Sbjct: 55 TRVLAVVKGEITQPYPDRGNEGSLAIFTEFSPMGDPAFEPGRPSEMAVELGRIIDRGLRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D ESLC+++ VW++RVD+++L+ GNL+ ++AALAAL +R P+ T GD
Sbjct: 115 SRAVDTESLCILSGRSVWSIRVDIHILDNYGNLVDAANLAALAALLSYRRPECTVGGDDG 174
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
QII+H ++P+ + I H P+ +++A F G+
Sbjct: 175 QQIIVHPPEVREPVGLIIHHLPIAVTFAFFGDGN 208
>gi|71031797|ref|XP_765540.1| exosome complex exonuclease Rrp45 [Theileria parva strain Muguga]
gi|68352497|gb|EAN33257.1| exosome complex exonuclease rrp45, putative [Theileria parva]
Length = 276
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 83/141 (58%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V +S +V P + RPNEG LF N E SP S +E G+ TD + FLE FKES
Sbjct: 65 VFTCISQEIVEPNSERPNEGFLFFNVETSPFTSESYEPGKTTDQEHNLIYFLENMFKESS 124
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
C+DLE+LC+ + ++VW +RV ++VL DGNLL CS++ALA+L H+R P + + +
Sbjct: 125 CLDLETLCITSGKQVWALRVYVHVLQDDGNLLSACSLSALASLLHYRKPLMELSDELNHS 184
Query: 576 HSAAEKDPIPMTILHYPVTIS 596
P+ I H P+ ++
Sbjct: 185 FYGLWHKGTPLNIYHVPMFVT 205
>gi|387192361|gb|AFJ68652.1| exosome complex component RRP45 [Nannochloropsis gaditana CCMP526]
gi|422294192|gb|EKU21492.1| exosome complex component RRP45 [Nannochloropsis gaditana CCMP526]
Length = 620
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 29/188 (15%)
Query: 443 GEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVM 502
G+A + + VL V+ + P RP EG L +N E SPMA+ + R T V
Sbjct: 49 GQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVE 108
Query: 503 INRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFR 562
++R +E+C ++S+ +D E+LCV+A KVW++R D+ +L+ GN++ +A +AAL HFR
Sbjct: 109 VDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFR 168
Query: 563 HPDVT------------STGD-----------------QIIIHSAAEKDPIPMTILHYPV 593
P+VT S D +++H + EK+P + I H P+
Sbjct: 169 LPEVTVLTGGSDERSNSSANDGESSVGRVRGGGGLGHASVVVHHSFEKEPSALPIHHVPI 228
Query: 594 TISYAVFN 601
+++ +FN
Sbjct: 229 CVTFVLFN 236
>gi|358369855|dbj|GAA86468.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Aspergillus kawachii IFO 4308]
Length = 292
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 84/150 (56%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P RP +GL I EL+ M SP ++ GRQ D + L++ +
Sbjct: 54 TSLIVRISAEVTKPHDDRPFDGLFTIAMELTAMGSPAWDNGRQGDFETYVTNVLDRVVRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ W++R D++V +YDGNL+ I +A L HFR D Q+
Sbjct: 114 SNALDTESLCILKGVSCWSIRADVHVTDYDGNLIDAACIGIMAGLQHFRRQDAVVKDGQV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
I++ E+ P+ + I H P+++++ F+ G
Sbjct: 174 IVYGLDERVPVALNITHKPLSVTFHTFDEG 203
>gi|350636872|gb|EHA25230.1| hypothetical protein ASPNIDRAFT_49678 [Aspergillus niger ATCC 1015]
Length = 292
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 84/150 (56%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P RP +GL I EL+ M SP ++ GRQ D + L++ +
Sbjct: 54 TSLIVRISAEVTKPHDDRPFDGLFTIAMELTAMGSPAWDNGRQGDFETYVTNVLDRVVRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ W++R D++V +YDGNL+ I +A L HFR D Q+
Sbjct: 114 SNALDTESLCILKGVSCWSIRADVHVTDYDGNLIDAACIGIMAGLQHFRRQDAVVKDGQV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
I++ E+ P+ + I H P+++++ F+ G
Sbjct: 174 IVYGLDERVPVALNITHKPLSVTFHTFDEG 203
>gi|388851534|emb|CCF54724.1| probable RRP45-Exosome complex exonuclease [Ustilago hordei]
Length = 322
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 99/158 (62%), Gaps = 7/158 (4%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFE-TGRQTDTS-----VMIN 504
+K + V V N+ P++ RP EG L I ++SPMA +++ TG ++S V+ +
Sbjct: 53 IKGTRVSTSVRANLFPPRSDRPYEGFLQITTDISPMAGVEYDSTGGGANSSARAKEVLFD 112
Query: 505 RFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
R +EK + ++ +D E+LCVVA E+VWNV + +++L+ G L + ++ +L HFR P
Sbjct: 113 RLIEKAIRRTEAVDREALCVVAGEQVWNVHLTVHLLSDTGAALDAAVLCSMLSLRHFRRP 172
Query: 565 DVT-STGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
D + G+Q+ ++S+ E+ PIP+ I H P+ +++A+FN
Sbjct: 173 DYSIENGNQVRLYSSDERVPIPLAIHHTPLCVTFAIFN 210
>gi|145246552|ref|XP_001395525.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Aspergillus niger CBS 513.88]
gi|134080243|emb|CAK97146.1| unnamed protein product [Aspergillus niger]
Length = 292
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 84/150 (56%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ ++ ++S + P RP +GL I EL+ M SP ++ GRQ D + L++ +
Sbjct: 54 TSLIVRISAEVTKPHDDRPFDGLFTIAMELTAMGSPAWDNGRQGDFETYVTNVLDRVVRH 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC++ W++R D++V +YDGNL+ I +A L HFR D Q+
Sbjct: 114 SNALDTESLCILKGVSCWSIRADVHVTDYDGNLIDAACIGIMAGLQHFRRQDAVVKDGQV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
I++ E+ P+ + I H P+++++ F+ G
Sbjct: 174 IVYRLDERVPVALNITHKPLSVTFHTFDEG 203
>gi|167518071|ref|XP_001743376.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778475|gb|EDQ92090.1| predicted protein [Monosiga brevicollis MX1]
Length = 330
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVM-INRFLEKCFK 512
+ V+AQ++C +V P +EG N ++ A + R + ++ + R LE+ FK
Sbjct: 58 TRVMAQLTCEVVAPHPDYDSEGFFRFNVSIAAGAGIAYAAQRSSSEEIVELTRLLERAFK 117
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
E++ ID ESLC+V EKVW VRVD+ VL GN+ +AALA + FR P V+ TG Q
Sbjct: 118 EARAIDSESLCIVKGEKVWEVRVDVTVLENGGNMADGVCLAALAGILTFRRPYVSLTGGQ 177
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ IHS E +P+ +++ H P+ ++ A GG
Sbjct: 178 VKIHSLEEHEPVSLSVHHRPIAVTIASIAGG 208
>gi|261190048|ref|XP_002621434.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Ajellomyces dermatitidis SLH14081]
gi|239591262|gb|EEQ73843.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Ajellomyces dermatitidis SLH14081]
gi|239606325|gb|EEQ83312.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Ajellomyces dermatitidis ER-3]
gi|327353102|gb|EGE81959.1| exosome complex exonuclease RRP45 [Ajellomyces dermatitidis ATCC
18188]
Length = 293
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 90/150 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + P+ R N+G+ ++ EL+ MASP +ETGRQ++ + R L++ +
Sbjct: 54 TSVVVRISAEVTKPRPERENDGIFTVSVELNDMASPAYETGRQSELETQLVRTLDRIIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ A + W+VR D++V++ DG L+ C +A + L HFR P+ ++
Sbjct: 114 SNALDTESLCIAAGKNCWHVRADVHVVDSDGGLVDSCCLAIMTGLLHFRLPEAVVRDGRV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
++ E+ P P+ + P++ ++ +++ G
Sbjct: 174 TVYRPEERVPSPLNLTKLPLSTTFNMYDEG 203
>gi|325088441|gb|EGC41751.1| exosome complex exonuclease RRP45 [Ajellomyces capsulatus H88]
Length = 293
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 91/150 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + P++ R N+G+ ++ EL+ MASP +ETGRQ++ + R L++ +
Sbjct: 54 TSVVVRISAEVTKPRSERENDGIFTVSVELNDMASPAYETGRQSELESQLVRTLDRIIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ A + W+VR D++V++ DG L+ C +A + L HFR P+ ++
Sbjct: 114 SNALDTESLCIAAGKNCWHVRADVHVVDSDGGLVDSCCLAIMTGLLHFRLPEAVVREGRV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
++ E+ P P+ + P++ ++ +++ G
Sbjct: 174 TVYRPEERVPSPLNLTKLPLSTTFNMYDEG 203
>gi|303279202|ref|XP_003058894.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460054|gb|EEH57349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 292
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA S + P R NEG + IN E SPMASP FE GR + + + LE+ +E
Sbjct: 58 TRVLAVTSAKLEPPGGGRSNEGSVTINVEFSPMASPNFEPGRPGEEASELAVVLERAIRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT--STGD 571
+ +D+ESLCV+A +VWN+RVD++VL+ GN+ G S+AA A+L FR P+ T +
Sbjct: 118 TGAVDVESLCVLAGRRVWNIRVDVHVLDACGNIAGAASLAANASLLSFRRPEATVDPSTQ 177
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISYAVF 600
+ +H A ++PIP+ + H P+ + + F
Sbjct: 178 LVTVHPADAREPIPLALHHLPIAVKFGFF 206
>gi|443895452|dbj|GAC72798.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp45 [Pseudozyma
antarctica T-34]
Length = 321
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 100/158 (63%), Gaps = 7/158 (4%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFE-TGRQTDTS-----VMIN 504
+K + V V ++ P++ RP EG L I ++SPMA +++ TG ++S V+ +
Sbjct: 53 IKGTRVSTSVRATLMPPRSDRPYEGFLQITTDISPMAGVEYDSTGGGANSSARAREVLFD 112
Query: 505 RFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
R +EK + ++ +D E+LCVVA E+VWNV + +++L+ G L ++++ +L HFR P
Sbjct: 113 RLIEKAVRRTEAVDREALCVVAGEQVWNVHLTVHLLSDTGAALDAAVLSSMLSLRHFRRP 172
Query: 565 DVT-STGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
D + G+Q+ ++SA E+ P+P+ I H P+ +++++FN
Sbjct: 173 DYSIENGNQVRLYSADERVPVPLAIHHTPLCVTFSIFN 210
>gi|240282302|gb|EER45805.1| exosome complex exonuclease RRP45 [Ajellomyces capsulatus H143]
Length = 293
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 91/150 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + P++ R N+G+ ++ EL+ MASP +ETGRQ++ + R L++ +
Sbjct: 54 TSVVVRISAEVTKPRSERENDGIFTVSMELNDMASPAYETGRQSELESQLVRTLDRIIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ A + W+VR D++V++ DG L+ C +A + L HFR P+ ++
Sbjct: 114 SNALDTESLCIAAGKNCWHVRADVHVVDSDGGLVDSCCLAIMTGLLHFRLPEAVVREGRV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
++ E+ P P+ + P++ ++ +++ G
Sbjct: 174 TVYRPEERVPSPLNLTKLPLSTTFNMYDEG 203
>gi|225559371|gb|EEH07654.1| exosome complex exonuclease RRP45 [Ajellomyces capsulatus G186AR]
Length = 293
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 91/150 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + P++ R N+G+ ++ EL+ MASP +ETGRQ++ + R L++ +
Sbjct: 54 TSVVVRISAEVTKPRSERENDGIFTVSVELNDMASPAYETGRQSELESQLVRTLDRIIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ A + W+VR D+++++ DG L+ C +A + L HFR P+ ++
Sbjct: 114 SNALDTESLCIAAGKNCWHVRADVHIVDSDGGLVDSCCLAIMTGLLHFRLPEAVVREGRV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
++ E+ P P+ + P++ ++ +++ G
Sbjct: 174 TVYRPEERVPSPLNLTKLPLSTTFNMYDEG 203
>gi|195997269|ref|XP_002108503.1| hypothetical protein TRIADDRAFT_51482 [Trichoplax adhaerens]
gi|190589279|gb|EDV29301.1| hypothetical protein TRIADDRAFT_51482 [Trichoplax adhaerens]
Length = 391
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 120/237 (50%), Gaps = 36/237 (15%)
Query: 92 DCDDLLFFVRK-----KYIKTSSRNLPKFETEVEVFRKDSRKLP---------------- 130
D DDLLFFV++ + I T SR +V+V+R+ ++ LP
Sbjct: 102 DQDDLLFFVKRCMVDEEVIVTESR-------KVQVYRRTTKNLPSSDSLIFALATVIDDM 154
Query: 131 --IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMD 188
D V W+ETV LNMI+ F+Y +T+A + ++KR S V+ASP++RRMD
Sbjct: 155 YSAADEMVLWDETVCLNMILQNFNYIITMAASNNDNAT--DIIKRWSHTVFASPNKRRMD 212
Query: 189 TKGEV-EEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVK-SVIFLGSIR 246
+KG+ E + YP + F +D F EVF D + + +ELVA +A + VIF GS+R
Sbjct: 213 SKGDTSENIDYPNIYFYIDEFEEVFKDFTFGHNQHLAIELVAVSKAEPAECRVIFQGSVR 272
Query: 247 YDALKRVYDARTSVSN--KFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
+ + + S + RM + + +S + F + GP G+G E+A+ +
Sbjct: 273 FQVAWEHFVKKQSETGGTGMLYRMLERVRYDGRDSFVRFAGLNGPDGRGRGEVALRR 329
>gi|119625655|gb|EAX05250.1| exosome component 9, isoform CRA_d [Homo sapiens]
Length = 393
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 86/177 (48%), Gaps = 46/177 (25%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR +E+C +
Sbjct: 53 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRN 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EK
Sbjct: 113 SKCIDTESLCVVAGEK-------------------------------------------- 128
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 129 --YTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 183
>gi|119625654|gb|EAX05249.1| exosome component 9, isoform CRA_c [Homo sapiens]
Length = 377
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 86/177 (48%), Gaps = 46/177 (25%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL QVSC +V PK R EG+LF N ELS MA+P FE GRQ+D V +NR +E+C +
Sbjct: 37 TRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRN 96
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SKCID ESLCVVA EK
Sbjct: 97 SKCIDTESLCVVAGEK-------------------------------------------- 112
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQK 630
++ E+DP+P++I H P+ +S+A F G+ P E +D L ++ ++ +
Sbjct: 113 --YTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHR 167
>gi|402217991|gb|EJT98069.1| ribosomal protein S5 domain 2-like protein [Dacryopinax sp. DJM-731
SS1]
Length = 299
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 28/190 (14%)
Query: 425 TDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELS 484
T + F +S W S GE + V+AQ+S + P RP EG++ I+ E S
Sbjct: 36 TTIRFGNSLGWVECSI--GE---------TRVVAQISATVTRPYFDRPFEGIIVIHTEFS 84
Query: 485 PMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK--------------- 529
PMAS +ETGR ++ + + R LEK + S+ +D E+LC++A +K
Sbjct: 85 PMASSAYETGRPSEEEITMARILEKTIRRSEALDREALCILAGQKVSVPHRETNTKIVRG 144
Query: 530 --VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMT 587
VW +R+ + L +GNLL C +AA+AAL HFR P+V GD+ + S E+ P+P+
Sbjct: 145 QQVWTLRLTIQFLADEGNLLDCACMAAMAALRHFRKPEVEVVGDEATMFSPEERAPVPLA 204
Query: 588 ILHYPVTISY 597
+ H P+ +S+
Sbjct: 205 LHHQPLCVSF 214
>gi|325184014|emb|CCA18471.1| exosome complex exonuclease RRP45like protein putati [Albugo
laibachii Nc14]
Length = 473
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 97/166 (58%), Gaps = 7/166 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA V +V P RP EG + +LSPMAS FETGR + S+ + + +++ ++
Sbjct: 61 TRVLANVHGEIVTPFPDRPTEGFFNTSVDLSPMASQNFETGRPSSLSIELAKMIDRSIRD 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT--STGD 571
+ D E+L ++A EKVW + +++V+++DGNL IA++AAL HFR PD++ +
Sbjct: 121 CRAFDTEALAILAGEKVWAIYCEVHVIDHDGNLTDAVQIASIAALMHFRRPDLSLELQKE 180
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISYAVF-----NGGSEGSTVPGF 612
I + D IP+++ H P+++S++ ++GS+ P F
Sbjct: 181 NEDIKNFEAYDTIPLSLHHIPLSVSFSYMLTRDNMDKNDGSSSPLF 226
>gi|241952166|ref|XP_002418805.1| exosome complex exonuclease, putative; ribosomal RNA-processing
protein, putative [Candida dubliniensis CD36]
gi|223642144|emb|CAX44110.1| exosome complex exonuclease, putative [Candida dubliniensis CD36]
Length = 331
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 12/168 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSV-MINRFLEKCFK 512
++V+ ++ + P RP EG++ IN E+ Q D + +INR L++ +
Sbjct: 63 TKVMVNITSRITEPYQDRPFEGIMTINCEIPNHIKIQSNDNDNEDEFINLINRALDRAIR 122
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT----- 567
S +DLE+LC++A EKVW + +DL VLNYDGNL+ +A + AL F+ PDVT
Sbjct: 123 RSNAVDLENLCIIAGEKVWELIIDLQVLNYDGNLIDSGCLAIITALLDFKKPDVTINNNN 182
Query: 568 -----STGDQIIIHSAAEKDP-IPMTILHYPVTISYAVFNGGSEGSTV 609
ST IIIH K P I ++ILH P+ +++++FN GS+ + +
Sbjct: 183 TSSNSSTSGNIIIHDDEMKRPFIELSILHIPICLTFSLFNLGSKETNL 230
>gi|326427711|gb|EGD73281.1| hypothetical protein PTSG_04997 [Salpingoeca sp. ATCC 50818]
Length = 495
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 126/230 (54%), Gaps = 13/230 (5%)
Query: 75 WTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKD-SRKLPI-G 132
W D+ ++F+ +T++ DDL+FFV + + S++ K + +++V+R+ +R LP G
Sbjct: 19 WADVLQQHFV-ETEAG---DDLIFFVPRNLELSGSKD--KDQAQLKVYRRGGTRPLPKRG 72
Query: 133 DPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRRMDTKGE 192
+++W+ETV LN ++ + LT A+C T + L+ ++ +++VYASPS R MD KG
Sbjct: 73 CSEINWKETVCLNTLMQAVSFELTTALCKETEARTLRPVQSSAKEVYASPSYRSMDVKGS 132
Query: 193 VEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIRYDALKR 252
+ +TYP + FTVD+F+ F V + +EL A R G ++++F GSI +
Sbjct: 133 GDVITYPDLFFTVDDFDAFFEKYKVHPSQTFTLELTA--RIGDFETILFTGSIAHSTASP 190
Query: 253 VYDARTSVSNKFTQRMSFGIFSNNSNSR--IEFVKMKGPQG-KGFAEMAV 299
+ R G +S S ++ + F +K P G G+ EMA+
Sbjct: 191 SNGLVAEYMSHARDRRKGGAYSWISRNQDDLVFFNIKAPTGAAGYVEMAI 240
>gi|226293456|gb|EEH48876.1| exosome complex exonuclease RRP45 [Paracoccidioides brasiliensis
Pb18]
Length = 300
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 88/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + P R N+G+ + EL+ MASP F+TG Q++ + R L++ +
Sbjct: 54 TSVVVRISAEVTKPHPERENDGIFTVVVELNDMASPAFKTGWQSEMETQLARILDRIIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ A + W++R D++V++ DG L+ C +A + AL HFR P+ ++
Sbjct: 114 SNALDTESLCIAAGKNCWHIRADVHVIDSDGGLVDSCCLAIMTALLHFRLPEAIVREGRV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ S E+ P P+ + P++ ++ +++ G
Sbjct: 174 TVFSPEERVPSPLNLTKLPLSTTFNIYDEG 203
>gi|71051057|gb|AAH98850.1| RGD1304694 protein, partial [Rattus norvegicus]
Length = 223
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%), Gaps = 3/83 (3%)
Query: 219 DGEMVCVELVASDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSN 278
+GEMVCVELVASD+ + VIF GSIRY+ALK+VYD R SV+ + Q+MSFG + N+
Sbjct: 1 EGEMVCVELVASDKTNMFQGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYNN- 59
Query: 279 SRIEFVKMKGPQGKGFAEMAVTK 301
+EFV+MKGPQGKG AEMAV++
Sbjct: 60 --MEFVRMKGPQGKGHAEMAVSR 80
>gi|225684062|gb|EEH22346.1| exosome component 9 [Paracoccidioides brasiliensis Pb03]
Length = 295
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 88/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ ++S + P R N+G+ + EL+ MASP F+TG Q++ + R L++ +
Sbjct: 54 TSVVVRISAEVTKPHPERENDGIFTVVVELNDMASPAFKTGWQSEMETQLARILDRIIRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ A + W++R D++V++ DG L+ C +A + AL HFR P+ ++
Sbjct: 114 SNALDTESLCIAAGKNCWHIRADVHVIDSDGGLVDSCCLAIMTALLHFRLPEAIVREGRV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ S E+ P P+ + P++ ++ +++ G
Sbjct: 174 TVFSPEERVPSPLNLTKLPLSTTFNIYDEG 203
>gi|410721457|ref|ZP_11360792.1| RNase PH-related exoribonuclease [Methanobacterium sp. Maddingley
MBC34]
gi|410598914|gb|EKQ53477.1| RNase PH-related exoribonuclease [Methanobacterium sp. Maddingley
MBC34]
Length = 266
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
PN G+L N+EL PMA+P FE G +TSV ++R ++C +E K +DLE L ++ +KVW
Sbjct: 74 PNVGVLITNSELLPMAAPNFEAGPPNETSVELSRVTDRCIREGKTVDLEKLVIIPGKKVW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ +DL++++YDGNL+ + +LAAL + + P T GD+++I +P+ I
Sbjct: 134 MIFLDLHIVDYDGNLMDAAVLGSLAALMNTKIPSTTIEGDEVVIDYGTM---VPIPIKEQ 190
Query: 592 PVTISYAVFNG 602
P+ + A G
Sbjct: 191 PLMCTMAKIGG 201
>gi|343426851|emb|CBQ70379.1| probable RRP45-Exosome complex exonuclease [Sporisorium reilianum
SRZ2]
Length = 316
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET-GRQTDTS-----VMIN 504
+K + V V ++ P++ RP EG L I ++SPMA +++T G ++S V+
Sbjct: 53 IKGTRVSTSVKATLIPPRSDRPYEGFLQITTDISPMAGIEYDTTGGGANSSARAREVLFE 112
Query: 505 RFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
R +EK + ++ +D E+LCVVA E+VWNV + +++L+ G L + ++ +L HFR P
Sbjct: 113 RLIEKAVRRTEAVDREALCVVAGEQVWNVHLSVHLLSDTGAALDAAVLCSMLSLRHFRRP 172
Query: 565 D-VTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
D G + + S E+ P+P+ I H P+ +++A+FN
Sbjct: 173 DYAIDNGTHVHLFSTDERVPVPLAIHHTPLCVTFAIFN 210
>gi|71004918|ref|XP_757125.1| hypothetical protein UM00978.1 [Ustilago maydis 521]
gi|46096381|gb|EAK81614.1| hypothetical protein UM00978.1 [Ustilago maydis 521]
Length = 327
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 102/171 (59%), Gaps = 7/171 (4%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFE-TGRQTDTS-----VMIN 504
+K + V V ++ P++ RP EG L I ++SPMA +++ TG ++S V+ +
Sbjct: 53 IKGTRVSTCVRATLMPPRSDRPYEGFLQITTDISPMAGIEYDSTGGGANSSARAREVLFD 112
Query: 505 RFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
R ++K + ++ +D E+LCVVA E+VWNV + +++L+ G L + ++ +L HFR P
Sbjct: 113 RLIDKAVRRTEAVDREALCVVAGEQVWNVHLTVHLLSDTGAALDAAVLCSMLSLRHFRRP 172
Query: 565 DVT-STGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE 614
D + G+Q+ ++S E+ P+P+ I H P+ +++A+FN ST T+
Sbjct: 173 DYSIENGNQVRLYSLDERVPVPLAIHHTPLCVTFAIFNHLPSISTAASKTQ 223
>gi|296812847|ref|XP_002846761.1| exosome complex exonuclease RRP45 [Arthroderma otae CBS 113480]
gi|238842017|gb|EEQ31679.1| exosome complex exonuclease RRP45 [Arthroderma otae CBS 113480]
Length = 292
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 87/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL ++S + P+ R +G+ + EL+ MA P +ETGR ++ V ++R L+K +
Sbjct: 54 TAVLVRISAELTTPRPERDCDGIFTVVVELNDMALPGYETGRPSELEVSLSRTLDKIVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ WN+R D+++L+ DG L+ +A +A L HFR P+ T ++
Sbjct: 114 SNALDTESLCIAKGRICWNIRADIHILDCDGGLIDASCLAIMAGLLHFRLPESTVRDGEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ S EK P+ + + P+ +++ +++ G
Sbjct: 174 TVFSMEEKVPVSLNLTKIPLAVTFNLYDEG 203
>gi|255725482|ref|XP_002547670.1| hypothetical protein CTRG_01977 [Candida tropicalis MYA-3404]
gi|240135561|gb|EER35115.1| hypothetical protein CTRG_01977 [Candida tropicalis MYA-3404]
Length = 299
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++++ +S ++ P RP EG+ IN EL P + +++R LEK +
Sbjct: 53 TKLIVNISARIIEPYKDRPFEGIFTINCEL-----PNNLKSEEIIDENLLSRTLEKSIRR 107
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-Q 572
S +DLE+LC++A EKVW + +DLN LNYDGNL+ +A + L F+ D++ T +
Sbjct: 108 SNSLDLENLCIIAGEKVWEIIIDLNYLNYDGNLIDSGCLAIMIGLLDFKKNDISVTSNGG 167
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
I I E+ PI ++ILH P+ ++++ FN GS+
Sbjct: 168 IKIFDLDERQPIELSILHIPICLTFSFFNLGSK 200
>gi|428672169|gb|EKX73083.1| 3' exoribonuclease family, domain 1 containing protein [Babesia
equi]
Length = 305
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 75/120 (62%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V + V +V P + RPNEG LF NAEL P+ S +E G+ ++ I+ F+E FKES
Sbjct: 66 VFSSVCAEVVEPNSERPNEGFLFFNAELMPLTSGLYEPGKASELEQNISCFIESVFKESG 125
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
++LESLC+ + + VW +RV ++VL DGNL CS +ALA+L H+R +V D + I
Sbjct: 126 SLNLESLCITSGKHVWAIRVYIHVLQDDGNLFDVCSFSALASLLHYRIQEVKVVDDTVKI 185
>gi|326469540|gb|EGD93549.1| 3' exoribonuclease [Trichophyton tonsurans CBS 112818]
gi|326478933|gb|EGE02943.1| exosome complex exonuclease RRP45 [Trichophyton equinum CBS 127.97]
Length = 292
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 88/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL ++S + P+ R +G+ + EL+ MA P +ETGR ++ V ++R L+K +
Sbjct: 54 TAVLVRISAELTTPRPERDCDGIFTVVVELNDMALPGYETGRPSELEVSLSRTLDKIVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ WNVR D+++L+ DG L+ +A +A L HFR P+ T ++
Sbjct: 114 SNALDTESLCIAKGRICWNVRADIHILDCDGGLIDASCLAIMAGLLHFRLPESTVRDGEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ + EK P+ + + P+++++ +++ G
Sbjct: 174 TVFTTEEKVPVQLNLTKIPLSVTFNLYDEG 203
>gi|302654106|ref|XP_003018865.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Trichophyton verrucosum HKI 0517]
gi|291182546|gb|EFE38220.1| exosome complex endonuclease 2/ribosomal RNA processing protein,
putative [Trichophyton verrucosum HKI 0517]
Length = 292
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 88/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL ++S + P+ R +G+ + EL+ MA P +ETGR ++ V ++R L+K +
Sbjct: 54 TAVLVRISAELTTPRPERDCDGIFTVVVELNDMALPGYETGRPSELEVSLSRTLDKIVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ WNVR D+++L+ DG L+ +A +A L HFR P+ T ++
Sbjct: 114 SNALDTESLCIAKGRICWNVRADIHILDCDGGLIDASCLAIMAGLLHFRLPESTVRDGEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ + EK P+ + + P+++++ +++ G
Sbjct: 174 TVFTTEEKVPVQLNLTKIPLSVTFNLYDEG 203
>gi|218664806|gb|ACK99565.1| Rrp45p [Pichia kudriavzevii]
gi|218664811|gb|ACK99569.1| Rrp45p [Pichia kudriavzevii]
gi|218664815|gb|ACK99572.1| Rrp45p [Pichia kudriavzevii]
gi|218664819|gb|ACK99575.1| Rrp45p [Pichia kudriavzevii]
gi|218664823|gb|ACK99578.1| Rrp45p [Pichia kudriavzevii]
gi|218664827|gb|ACK99581.1| Rrp45p [Pichia kudriavzevii]
gi|218664831|gb|ACK99584.1| Rrp45p [Pichia kudriavzevii]
gi|218664835|gb|ACK99587.1| Rrp45p [Pichia kudriavzevii]
gi|218664839|gb|ACK99590.1| Rrp45p [Pichia kudriavzevii]
gi|218664843|gb|ACK99593.1| Rrp45p [Pichia kudriavzevii]
Length = 353
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 75/120 (62%), Gaps = 4/120 (3%)
Query: 496 QTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAAL 555
Q T +++ R +EK + S +DLESLC++A +K W VR D+ LNYDGNL+ SIA +
Sbjct: 104 QGATEILLGRLIEKGVRRSNALDLESLCIIAGQKCWAVRADVRFLNYDGNLVDAASIAVI 163
Query: 556 AALAHFRHPDV----TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
AL HFR PDV + G ++II+ +++ +P++ILH P+ +++ F+ S + G
Sbjct: 164 TALLHFRKPDVELVGSGEGTELIIYDEKQREMVPLSILHIPICVTFQFFSTESVERNIKG 223
>gi|163311573|gb|ABY26746.1| Rrp45p, partial [Pichia kudriavzevii]
Length = 353
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 75/120 (62%), Gaps = 4/120 (3%)
Query: 496 QTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAAL 555
Q T +++ R +EK + S +DLESLC++A +K W VR D+ LNYDGNL+ SIA +
Sbjct: 104 QGATEILLGRLIEKGVRRSNALDLESLCIIAGQKCWAVRADVRFLNYDGNLVDAASIAVI 163
Query: 556 AALAHFRHPDV----TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
AL HFR PDV + G ++II+ +++ +P++ILH P+ +++ F+ S + G
Sbjct: 164 TALLHFRKPDVELVGSGEGTELIIYDEKQREMVPLSILHIPICVTFQFFSTESVERNIKG 223
>gi|413943885|gb|AFW76534.1| hypothetical protein ZEAMMB73_585681 [Zea mays]
Length = 280
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 80/122 (65%), Gaps = 3/122 (2%)
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
MA FE GR ++++ + R +++ +ES+ +D+E LCVVA + VW+VRVDL++L+ GN
Sbjct: 1 MADLSFEPGRPGESTIELGRVIDRGLRESRAVDMEFLCVVAGKHVWSVRVDLHILDNGGN 60
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGD---QIIIHSAAEKDPIPMTILHYPVTISYAVFNG 602
L+ +I ALAAL+ F P+ T GD Q+ +H +D +P+TI H P+ +++A F
Sbjct: 61 LIDAANIVALAALSTFWRPECTVGGDDGQQVTVHDPEVRDLLPLTIHHMPIVVTFAYFGE 120
Query: 603 GS 604
G+
Sbjct: 121 GN 122
>gi|327303316|ref|XP_003236350.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Trichophyton rubrum CBS 118892]
gi|326461692|gb|EGD87145.1| exosome complex endonuclease 2/ribosomal RNA processing protein
[Trichophyton rubrum CBS 118892]
Length = 292
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 88/150 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL ++S + P+ R +G+ + EL+ MA P +ETGR ++ V ++R L+K +
Sbjct: 54 TAVLVRISAELTTPRPERDCDGIFTVVVELNDMALPGYETGRPSELEVSLSRTLDKIVRR 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D ESLC+ WN+R D+++L+ DG L+ +A +A L HFR P+ T ++
Sbjct: 114 SNALDTESLCIAKGRICWNIRADIHILDCDGGLIDASCLAIMAGLLHFRLPESTVRDGEV 173
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ + EK P+ + + P+++++ +++ G
Sbjct: 174 TVFTTEEKVPVQLNLTKIPLSVTFNLYDEG 203
>gi|163311555|gb|ABY26732.1| Rrp45p [Pichia kudriavzevii]
gi|163311560|gb|ABY26736.1| Rrp45p [Pichia kudriavzevii]
gi|163311565|gb|ABY26740.1| Rrp45p [Pichia kudriavzevii]
Length = 410
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 75/120 (62%), Gaps = 4/120 (3%)
Query: 496 QTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAAL 555
Q T +++ R +EK + S +DLESLC++A +K W VR D+ LNYDGNL+ SIA +
Sbjct: 161 QGATEILLGRLIEKGVRRSNALDLESLCIIAGQKCWAVRADVRFLNYDGNLVDAASIAVI 220
Query: 556 AALAHFRHPDV----TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
AL HFR PDV + G ++II+ +++ +P++ILH P+ +++ F+ S + G
Sbjct: 221 TALLHFRKPDVELVGSGEGTELIIYDEKQREMVPLSILHIPICVTFQFFSTESVERNIKG 280
>gi|300121304|emb|CBK21684.2| unnamed protein product [Blastocystis hominis]
Length = 273
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 91/148 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V A +C +V + PNEGL I+ ++PM ++ T D + R LE+ K+
Sbjct: 53 TKVCAITNCEIVSGYSDHPNEGLFTIHVNVTPMGGREYTTELSDDVRFELQRVLERSLKD 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+ +D+ESLC++ EKV++V +N+++ +GN+ +AA ++L +FR PD + G Q+
Sbjct: 113 NNTVDVESLCIIPGEKVFSVHCYVNIIDNNGNIFDAAVLAATSSLCYFRRPDYSINGTQV 172
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
I++ E++P+P+ + + P++IS+ + +
Sbjct: 173 RIYAPNEQEPVPLCLHYQPISISFCLLD 200
>gi|315050464|ref|XP_003174606.1| exosome complex exonuclease RRP45 [Arthroderma gypseum CBS 118893]
gi|311339921|gb|EFQ99123.1| exosome complex exonuclease RRP45 [Arthroderma gypseum CBS 118893]
Length = 292
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 87/148 (58%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL ++S + P+ R +G+ + EL+ MA P +ETGR ++ V ++R L+K + S
Sbjct: 56 VLVRISAELTTPRPERDCDGIFTVVVELNDMALPGYETGRPSELEVSLSRTLDKIVRRSN 115
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+D ESLC+ WNVR D+++L+ DG L+ +A +A L HFR P+ T ++ +
Sbjct: 116 ALDTESLCISKGMICWNVRADIHILDCDGGLVDASCLAIMAGLLHFRLPESTVRDGEVTV 175
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ EK P+ + + P+++++ +++ G
Sbjct: 176 FTTEEKVPVQLNLTKIPLSVTFNLYDEG 203
>gi|295664845|ref|XP_002792974.1| exosome complex exonuclease RRP45 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278495|gb|EEH34061.1| exosome complex exonuclease RRP45 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 295
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
Query: 448 CPWVK----PSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
C VK + V+ ++S + P R N+G+ + EL+ M SP F+TG Q++ +
Sbjct: 44 CGHVKLQLGKTSVVVRISAEVTKPHPERENDGIFTVVVELNDMTSPAFKTGWQSEMETQL 103
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R L++ + S +D ESLC+ A + W++R D++V++ DG L+ C +A + AL HFR
Sbjct: 104 ARILDRIIRRSNALDTESLCIAAGKNCWHIRADVHVIDSDGGLVDSCCLAIMTALLHFRL 163
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+ ++I+ S E+ P P+ + P++ ++ +++ G
Sbjct: 164 SEAIVREGRVIVFSPEERVPSPLNLTKLPLSTTFNIYDEG 203
>gi|225712550|gb|ACO12121.1| Exosome complex exonuclease RRP45 [Lepeophtheirus salmonis]
Length = 210
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 75/114 (65%), Gaps = 6/114 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VLA SC++ P+++RPNEG+L I E P+A T+ V +NR +E+ K+
Sbjct: 50 TRVLASTSCSVGEPQSSRPNEGVLKIRME--PLAKRSM----TTEALVELNRVIERVLKQ 103
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT 567
SKC+D+ESLC+ + EKVW + +++ +LN GN C S+A LAAL HF+ PDVT
Sbjct: 104 SKCLDMESLCISSGEKVWIISLEMTILNDAGNAADCASVAGLAALCHFKRPDVT 157
>gi|146302863|ref|YP_001190179.1| exosome complex RNA-binding protein Rrp42 [Metallosphaera sedula
DSM 5348]
gi|145701113|gb|ABP94255.1| ribosomal RNA-processing protein RRP42 [Metallosphaera sedula DSM
5348]
Length = 280
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA V P PN+G L +NAEL P+A FE G + ++ ++R +++ ++SK
Sbjct: 63 VLAGVKVEEDEPYPDTPNQGNLVVNAELLPLAYETFEPGPPDENAIELSRVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L + +KVW V VD++VL+Y GN+L C+IAA+AAL + P V D III
Sbjct: 123 AVDLSGLVIEPGKKVWTVWVDISVLDYGGNVLDACTIAAVAALYDAKLPKVVRENDNIII 182
Query: 576 HSAAEKDPIPMTILHYP-VTISYA 598
+ P+P + YP VT+S A
Sbjct: 183 QKEEKVTPLP---IKYPVVTVSVA 203
>gi|163311569|gb|ABY26743.1| Rrp45p, partial [Pichia kudriavzevii]
Length = 353
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 496 QTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAAL 555
Q T +++ R +EK + S +DLESLC++A +K W VR D+ LN DGNL+ SIA +
Sbjct: 104 QGATEILLGRLIEKSVRRSNALDLESLCIIAGQKCWAVRADVRFLNSDGNLVDAASIAVI 163
Query: 556 AALAHFRHPDV----TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
AL HFR PDV + G ++II+ +++ +P++ILH P+ +++ F+ S + G
Sbjct: 164 TALLHFRKPDVELVGSGEGTELIIYDEKQREMVPLSILHIPICVTFQFFSTESVERNIKG 223
>gi|408382268|ref|ZP_11179813.1| exosome complex RNA-binding protein Rrp42 [Methanobacterium
formicicum DSM 3637]
gi|407814924|gb|EKF85546.1| exosome complex RNA-binding protein Rrp42 [Methanobacterium
formicicum DSM 3637]
Length = 266
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
PN G+L N+EL PMA+P FE G +TSV ++R ++C +E K +DLE L ++ +KVW
Sbjct: 74 PNVGVLITNSELVPMAAPNFEAGPPNETSVELSRVTDRCVREGKVVDLEKLVIIPGKKVW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ +DL+V++YDGNL+ + ++AAL + + P T D+++I +P+ I
Sbjct: 134 MIFLDLHVIDYDGNLMDAAVLGSVAALMNTKIPSTTIEDDEVVIDYETM---VPIPIAEQ 190
Query: 592 PVTISYAVFNG 602
P+ + A G
Sbjct: 191 PLMCTLAKIGG 201
>gi|84999936|ref|XP_954689.1| exosome complex exonuclease [Theileria annulata]
gi|65305684|emb|CAI74009.1| exosome complex exonuclease, putative [Theileria annulata]
Length = 322
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
+ VS +V P + RPNEG LF N E S S +E G+ TD + FLE FKES
Sbjct: 65 IFTCVSQEIVEPNSERPNEGFLFFNVETS-FTSECYEPGKTTDQEHNLIYFLENMFKESS 123
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
C+DLE+LC+ + ++V +RV ++VL DGNLL CS +ALA+L H+R P + + +
Sbjct: 124 CLDLETLCITSGKQVLALRVYVHVLQDDGNLLSACSFSALASLLHYRKPLMELSDELNYS 183
Query: 576 HSAAEKDPIPMTILHYPVTIS 596
P+ I H P+ ++
Sbjct: 184 FYGLWHKGTPLNIYHVPILVT 204
>gi|333986696|ref|YP_004519303.1| 3' exoribonuclease [Methanobacterium sp. SWAN-1]
gi|333824840|gb|AEG17502.1| 3' exoribonuclease [Methanobacterium sp. SWAN-1]
Length = 263
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 411 TFHFWKESKRAQDWTDVDFMSSENWTSISAENG-----EAVWCPWVKPSEVLAQVSCNMV 465
+ KE KR D + + + IS E G E + ++++ V +
Sbjct: 13 VVNLIKEGKRT------DGRAFDEYREISLETGVIDKAEGSARVKIGNTQIMVGVKTQIA 66
Query: 466 IPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVV 525
P + P G+L N+EL PMA+P FE G + SV ++R ++C +E+K +DLE LC++
Sbjct: 67 APFSDTPQMGVLMTNSELLPMAAPNFEPGPPDENSVELSRVTDRCVREAKVVDLEKLCII 126
Query: 526 AEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+KVW + VDL++L+Y+GNL+ + +AAL + + P T D+I++
Sbjct: 127 EGKKVWMIFVDLHILDYEGNLMDTAVLGTVAALMNAKIPTATVEDDEIVL 176
>gi|312137049|ref|YP_004004386.1| ribosomal RNA-processing protein rrp42 [Methanothermus fervidus DSM
2088]
gi|311224768|gb|ADP77624.1| ribosomal RNA-processing protein RRP42 [Methanothermus fervidus DSM
2088]
Length = 270
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 78/126 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V + P PN G++ N+EL PMASP FE G + S+ + R +++C +E
Sbjct: 59 TQVLVGVKPTIGEPFPDNPNLGIIITNSELLPMASPTFEPGPPDERSIELARVVDRCIRE 118
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLE LC++ EKVW + +DL++L+YDGNL + A+AAL + P V+ D++
Sbjct: 119 SNMLDLEKLCIIEGEKVWILFIDLHILDYDGNLFDASVLGAVAALMDTKLPKVSIEDDEV 178
Query: 574 IIHSAA 579
+I ++
Sbjct: 179 VIDDSS 184
>gi|68483592|ref|XP_714249.1| potential exosome component Rrp45p [Candida albicans SC5314]
gi|68483865|ref|XP_714111.1| potential exosome component Rrp45p [Candida albicans SC5314]
gi|46435645|gb|EAK95022.1| potential exosome component Rrp45p [Candida albicans SC5314]
gi|46435802|gb|EAK95176.1| potential exosome component Rrp45p [Candida albicans SC5314]
gi|238883782|gb|EEQ47420.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 337
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 20/176 (11%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSV------MINRFL 507
++V+ ++ + P RP EG++ IN E+ Q + +INR L
Sbjct: 60 TKVMVNITSRITEPYQDRPFEGIMTINCEIPNHIKLQSNDTTNNNNDNEDEFINLINRAL 119
Query: 508 EKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT 567
++ + S +DLE+LC++A EKVW + +DL VLNYDGNL+ +A + AL F+ PDVT
Sbjct: 120 DRAIRRSNAVDLENLCIIAGEKVWELIIDLQVLNYDGNLIDSGCLAIITALLDFKKPDVT 179
Query: 568 -------------STGDQIIIHSAAEKDP-IPMTILHYPVTISYAVFNGGSEGSTV 609
G II+H K P I ++ILH P+ +++++FN GS+ + +
Sbjct: 180 INNNNTSNSSSTSGGGGNIIVHDDEMKRPFIELSILHIPICLTFSLFNLGSKETNL 235
>gi|407425705|gb|EKF39504.1| ribosomal RNA processing protein 45, putative [Trypanosoma cruzi
marinkellei]
Length = 333
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVM--INRFLEKCFKE 513
V A ++C +V P RP G+L + P E T+ + + FLE+ K
Sbjct: 65 VTAAIACELVEPYPYRPKHGMLDFSVR-----QPCTERDSSAKTAGLKKLTAFLERLIKG 119
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D ESLCV+ +VW++ VD+ VLN +GN+ A +A L H+R P++T GD +
Sbjct: 120 GGVVDTESLCVLPGRRVWSISVDVTVLNDEGNVTDVAVWATVAVLLHYRRPELTIRGDSV 179
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAV 599
I+H E+DP+P++I H P+ S+AV
Sbjct: 180 IVHPTHERDPVPLSIHHTPLCFSFAV 205
>gi|298713749|emb|CBJ33722.1| 3'-5'-exoribonuclease/ RNA binding [Ectocarpus siliculosus]
Length = 174
Score = 102 bits (255), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 71/115 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL V+ +V P RP EG L N EL PMA+ R + SV I R +E ++
Sbjct: 58 TRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGEQRNSPLSVEIARVIEIGVRD 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
S+ +D E+LC++ EKVW +R D+++L++ GNL+ C++A +AAL HFR P+ S
Sbjct: 118 SQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRPEPAS 172
>gi|118371223|ref|XP_001018811.1| 3' exoribonuclease family, domain 1 containing protein [Tetrahymena
thermophila]
gi|89300578|gb|EAR98566.1| 3' exoribonuclease family, domain 1 containing protein [Tetrahymena
thermophila SB210]
Length = 776
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 429 FMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMAS 488
M S N I N + + + ++ + + ++ PK +PNEG L N +LS M
Sbjct: 472 LMDSRNIKVIFGNNVGEIEV-LIGDTHIITKTTAEIIQPKQEKPNEGSLKFNVDLSSMQD 530
Query: 489 PQFETGRQTDT-SVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLL 547
Q S I + LEK K SK ID+ESLC+V ++VW++ VD +V++ GNL+
Sbjct: 531 EQQPNNVNIKKYSNEIQKLLEKIIKGSKAIDMESLCIVTNKRVWSINVDSSVVSNGGNLI 590
Query: 548 GCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
++ + +L HFR P V S Q I EK+P P++I H P+ ++A F
Sbjct: 591 DAIYLSVIISLLHFRKPYV-SVEQQSNIKIHTEKNPQPLSIHHIPIPFTFAFF 642
>gi|440804604|gb|ELR25481.1| Hypothetical protein ACA1_295670 [Acanthamoeba castellanii str.
Neff]
Length = 357
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 45/279 (16%)
Query: 54 RAKEKRQYLRNDMFLTQGTSYWTDLFVRYFLFQTDSNIDCDDLLFFVRKKYIK---TSSR 110
+ K +R+Y D W + F F+ + D N+D DLLFFV + + S
Sbjct: 11 QPKRERKYTATD---------WAEFFWTDFVLKDDPNMD--DLLFFVPDQPLAQPVAGSA 59
Query: 111 NLPKFETEVEVFRKDS---RKLPI-GDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPK 166
+ + ++ V RK KLP GD ++W+ET +LN+I + + T S
Sbjct: 60 DGGQQGSKFFVVRKHEDAEHKLPKRGDRSINWQETYFLNIITNHLKKGRGSTVTTPRSSA 119
Query: 167 HLQVLKRHSQK-VYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILV-RDGEMVC 224
H ++ + VYASP++ RMD K + TYP + F V++F E+ DI V +GE+VC
Sbjct: 120 HDTAKRQRVETCVYASPTQVRMDMKEDEVTETYPTIFFAVNDFQEMLQDITVSEEGELVC 179
Query: 225 VELVASDRAGSVKSV------------------------IFLGSIRYDALKRVYDARTSV 260
V+L+A+ GS S+ IF G++ Y+ +++ +
Sbjct: 180 VKLLATMPEGSSTSLHLAAVMSKTDPQTPTLTKKGGPVTIFSGAVGYEIVRQAFGMEAKK 239
Query: 261 SNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAV 299
N + + S + + + F+ MKGP GKG A+MAV
Sbjct: 240 QNS-PSTLRWLTRSRDKSPQQVFLNMKGPSGKGKAQMAV 277
>gi|325959905|ref|YP_004291371.1| 3' exoribonuclease [Methanobacterium sp. AL-21]
gi|325331337|gb|ADZ10399.1| 3' exoribonuclease [Methanobacterium sp. AL-21]
Length = 263
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 71/109 (65%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVA 526
P PN G+L N EL PMA+P FE+G + SV ++R ++C +E + +DLE LC+V
Sbjct: 68 PFGDTPNVGVLMTNTELLPMAAPNFESGPPDENSVELSRVTDRCIREGEVVDLEKLCIVP 127
Query: 527 EEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
EKVW + +DL+V++YDGNL+ + ++AAL + R P+ D++++
Sbjct: 128 GEKVWMIFLDLHVVDYDGNLMDAAVLGSVAALMNTRLPEAKIIDDEVVL 176
>gi|164660754|ref|XP_001731500.1| hypothetical protein MGL_1683 [Malassezia globosa CBS 7966]
gi|159105400|gb|EDP44286.1| hypothetical protein MGL_1683 [Malassezia globosa CBS 7966]
Length = 330
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 447 WCPWVKPSEVLAQVSCNMVI--PKATRPNEGLLFINAELSPMASPQFETG------RQTD 498
WC V+ + +A S + P+ RP EGL+ I+A++SPMA ++++G +
Sbjct: 49 WC-QVQLGDTIAVASVEAALSEPRRDRPYEGLVQIHADISPMAGVEYDSGGMFGASESRE 107
Query: 499 TSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
+ + R LE+ + ++ +D E+LCV+A + VW V + +++L G + +A++ AL
Sbjct: 108 RAALFERLLERAVRNTEAVDREALCVIAGKVVWCVSLTVHLLADQGASVDAAVLASMLAL 167
Query: 559 AHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
+R P+VT + +HS+ E+ P+P+ H P+ +SYAVF
Sbjct: 168 RQYRRPEVTVENGVVTVHSSDERVPVPLACHHVPLCVSYAVF 209
>gi|297829840|ref|XP_002882802.1| hypothetical protein ARALYDRAFT_341414 [Arabidopsis lyrata subsp.
lyrata]
gi|297328642|gb|EFH59061.1| hypothetical protein ARALYDRAFT_341414 [Arabidopsis lyrata subsp.
lyrata]
Length = 294
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 87/154 (56%), Gaps = 16/154 (10%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V+ +V P RPNEG I E SPMA P FE +++V + R +++ +E
Sbjct: 58 THVMAFVTAQLVQPYKDRPNEGSFSIFTEFSPMADPSFEPVHPGESAVELGRIIDRALRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-- 571
S+ +D ESLCV A + VW NL+ +IAALAAL FR PD T G+
Sbjct: 118 SRVVDTESLCVFAGKLVW-------------NLVDAANIAALAALLTFRRPDCTVGGENS 164
Query: 572 -QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
++IIH E++P+P+ I H P+ ++ FN GS
Sbjct: 165 QEVIIHPPEEREPLPLIIHHLPIAFTFGFFNKGS 198
>gi|412994111|emb|CCO14622.1| predicted protein [Bathycoccus prasinos]
Length = 514
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 471 RPNEGLLFINAELSPMASPQ---FETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
R EG L ++ ++SPMA P E R+ +T ++R LEKCF++++ +DLESLCV A
Sbjct: 102 RSAEGSLRVHVKMSPMAHPTDAPIEKNREHETCDGLSRMLEKCFRDARALDLESLCVSAG 161
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMT 587
VW++R+D+ +LN+ G+L SI A AL FR + + + + E++ + +
Sbjct: 162 RYVWHLRLDVTLLNHGGDLPLAVSIGANCALGSFRRYECSIDNETNRVTFHEERESVKLQ 221
Query: 588 ILHYPVTISYAVFNG-GSEGSTV 609
++H+PV + +A ++G S+GS +
Sbjct: 222 LMHHPVAVRFAFYDGSNSKGSGI 244
>gi|424814254|ref|ZP_18239432.1| RNase PH-related exoribonuclease [Candidatus Nanosalina sp.
J07AB43]
gi|339757870|gb|EGQ43127.1| RNase PH-related exoribonuclease [Candidatus Nanosalina sp.
J07AB43]
Length = 262
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Query: 442 NGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSV 501
NG A+ + ++VL +S ++ P + RP G + NAEL+PMA FE+G + V
Sbjct: 41 NGSAMVS--IGDTKVLVGISIDVEEPYSDRPESGTIVTNAELAPMADRDFESGPPREPGV 98
Query: 502 MINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHF 561
+ R +++ +ES+ IDLE LC+ EKV+ V +D++VLN DGNL+ C S+AA+AAL
Sbjct: 99 ELARVVDRGIRESEAIDLEELCIEPGEKVYTVFIDIHVLNNDGNLIDCSSLAAMAALKSG 158
Query: 562 RHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTA 621
P ST ++ + KD + + PVT + NG T E +
Sbjct: 159 HLP-AYSTEERSLNRDQKWKD---IELTTEPVTATVCKINGEMVFDTTREEQEAQEARLT 214
Query: 622 LALSQDRQKLGVDSAYAN 639
+++ QD Q + + N
Sbjct: 215 VSIDQDGQVVAMQKGGTN 232
>gi|71416323|ref|XP_810197.1| ribosomal RNA processing protein 45 [Trypanosoma cruzi strain CL
Brener]
gi|70874694|gb|EAN88346.1| ribosomal RNA processing protein 45, putative [Trypanosoma cruzi]
Length = 334
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVM--INRFLEKCFKE 513
V A ++C +V P RP G++ + P E T+ + + FLE+ K
Sbjct: 66 VTAAIACELVEPFPYRPKHGIIDFSVR-----QPYTERDSSAKTAELKKLTAFLERLIKG 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D E LCV+ +VW++ VD+ VLN +GN+ A +A L H+R P++T GD +
Sbjct: 121 GGVVDTEGLCVLPGRRVWSISVDVTVLNDEGNVTDVAVWATVAVLLHYRRPELTIRGDSV 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAV 599
I+H E+DP+P++I H P++ S+A+
Sbjct: 181 ILHPTHERDPVPLSIHHTPLSFSFAI 206
>gi|71655894|ref|XP_816503.1| ribosomal RNA processing protein 45 [Trypanosoma cruzi strain CL
Brener]
gi|70881635|gb|EAN94652.1| ribosomal RNA processing protein 45, putative [Trypanosoma cruzi]
Length = 334
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVM--INRFLEKCFKE 513
V A ++C +V P RP G++ + P E T+ + + FLE+ K
Sbjct: 66 VTAAIACELVEPFPCRPKHGIIDFSVR-----QPYTERDSSAKTAELKKLTAFLERLIKG 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D E LCV+ +VW++ VD+ VLN +GN+ A +A L H+R P++T GD +
Sbjct: 121 GGVVDTEGLCVLPGRRVWSISVDVTVLNDEGNVTDVAVWATVAVLLHYRRPELTIRGDSV 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAV 599
I+H E+DP+P++I H P++ S+A+
Sbjct: 181 ILHPTHERDPVPLSIHHTPLSFSFAI 206
>gi|407859308|gb|EKG06987.1| ribosomal RNA processing protein 45 [Trypanosoma cruzi]
Length = 334
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVM--INRFLEKCFKE 513
V A ++C +V P RP G++ + P E T+ + + FLE+ K
Sbjct: 66 VTAAIACELVEPFPYRPKHGIIDFSVR-----QPYTERDSSAKTAELKKLTAFLERLIKG 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D E LCV+ +VW++ VD+ VLN +GN+ A +A L H+R P++T GD +
Sbjct: 121 GGVVDTEGLCVLPGRRVWSISVDVTVLNDEGNVTDVAVWATVAVLLHYRRPELTIRGDSV 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAV 599
I+H E+DP+P++I H P++ S+A+
Sbjct: 181 ILHPTHERDPVPLSIHHTPLSFSFAI 206
>gi|156083393|ref|XP_001609180.1| 3' exoribonuclease family, domain 1 containing protein [Babesia
bovis T2Bo]
gi|154796431|gb|EDO05612.1| 3' exoribonuclease family, domain 1 containing protein [Babesia
bovis]
Length = 196
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V VS +V P P EG++ + ELSPM S +E G+ +D I+ +EK +K+S
Sbjct: 66 VFVAVSSEIVPPNVEHPTEGIVTFSVELSPMCSLNYEPGKASDVEQEISYAIEKIYKDSG 125
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
ID+ESLC+V+ + VW +RV++++L DGNLL +IA AL +R PD GD
Sbjct: 126 IIDVESLCIVSRKHVWCLRVNIHILQNDGNLLDATNIAVFKALMSYRKPDTQLNGD 181
>gi|335308756|ref|XP_003126020.2| PREDICTED: hypothetical protein LOC100522315 [Sus scrofa]
Length = 643
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 27/166 (16%)
Query: 176 QKVYASPSRRRMDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGS 235
Q+V+ASPS+ MD+KGE +++YP + F +D+F EVF D+ V +GEM C L+
Sbjct: 290 QQVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMACPGLILPPXPAC 349
Query: 236 VKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFA 295
+ + R + SV+ + Q+MSFG + N+ +EFV+MKGPQGKG A
Sbjct: 350 LTQAV-----------RTCP-QVSVAARMAQKMSFGFYKYNN---MEFVRMKGPQGKGHA 394
Query: 296 EMAVTKPKGYGVETPTSEPGYCETDMWDSDWDDDPEDFYYYRHQRR 341
EMAV++ V T + P C T+ D P + R +R+
Sbjct: 395 EMAVSR-----VSTGDTSP--CGTEE-----DSSPASPMHERPERK 428
>gi|430811931|emb|CCJ30637.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 250
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 70/99 (70%)
Query: 503 INRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFR 562
++ ++K + S +D ESLC++ ++ W++R D++ L++DGNL+ SIA +AAL HF+
Sbjct: 70 VSSIIDKAIRRSHMLDKESLCIIYGKQCWSIRADVHYLDHDGNLIDATSIAVVAALYHFK 129
Query: 563 HPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
P VT G+++I+HS E+ P+P+ + H P++I+++ FN
Sbjct: 130 KPVVTVEGEKVIVHSIEERVPVPLILTHIPISITFSFFN 168
>gi|332796516|ref|YP_004458016.1| 3' exoribonuclease [Acidianus hospitalis W1]
gi|332694251|gb|AEE93718.1| 3' exoribonuclease [Acidianus hospitalis W1]
Length = 276
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 4/170 (2%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA V P PN+G L +N EL P+A FE G + ++ ++R +++ ++SK
Sbjct: 63 VLAGVKVEPEEPFEDTPNQGNLVVNVELLPLAYETFEPGPPDENAIELSRVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
IDL L + +K+W V VD+ VL+Y GN+L C++AA++AL R P V GD+I I
Sbjct: 123 SIDLSKLVIEPGKKIWTVWVDIYVLDYGGNILDACTLAAVSALYDTRLPKVVKEGDEIKI 182
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALS 625
+ + +PM ++PV ++ +V G P E +D ++LS
Sbjct: 183 IKEEKGEKLPM---NFPV-VTVSVAKIGKHLVVDPDLDEEGIMDAKISLS 228
>gi|240104092|ref|YP_002960401.1| exosome complex RNA-binding protein Rrp42 [Thermococcus
gammatolerans EJ3]
gi|259645408|sp|C5A2B8.1|ECX2_THEGJ RecName: Full=Probable exosome complex exonuclease 2
gi|239911646|gb|ACS34537.1| 3'-5' exoribonuclease, exosome complex exonuclease 2, Rrp42p-like
protein (Rrp42p) [Thermococcus gammatolerans EJ3]
Length = 273
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 32/249 (12%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
EI AG MRD + + KE KR +D S E + I + G
Sbjct: 5 EIMAGIMRDRI-----------------LNLLKEGKR------IDGRSFEEYRDIEIKTG 41
Query: 444 ---EAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTD 498
+A WV+ + VL + ++ P P+ G++ N EL P+ASP FE G +
Sbjct: 42 FIEKAEGSAWVRLGGTRVLVGIKVDVGEPFPDLPDRGVMTTNVELVPLASPTFEPGPPDE 101
Query: 499 TSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
++ + R +++ +ES+ ++LE L +V + V V +D++VL++DGNL +AA+AAL
Sbjct: 102 RAIELARVIDRGIRESQAVELEKLVIVPGKLVRVVFIDVHVLDHDGNLFDATGLAAMAAL 161
Query: 559 AHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQL 618
+ P V + I E +P+P+ H P+ +++A GS P E +
Sbjct: 162 MTTKIPKVEYNEETGEIIKLDEYEPLPVK--HVPIPVTFAKI--GSSIIVDPNLDEETVM 217
Query: 619 DTALALSQD 627
D+ L ++ D
Sbjct: 218 DSRLTITTD 226
>gi|70606424|ref|YP_255294.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus
acidocaldarius DSM 639]
gi|449066636|ref|YP_007433718.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus
acidocaldarius N8]
gi|449068910|ref|YP_007435991.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus
acidocaldarius Ron12/I]
gi|68567072|gb|AAY80001.1| exosome complex exonuclease RRP43-like protein [Sulfolobus
acidocaldarius DSM 639]
gi|449035144|gb|AGE70570.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus
acidocaldarius N8]
gi|449037418|gb|AGE72843.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus
acidocaldarius Ron12/I]
Length = 276
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA V P PN+G L +N EL P+A FE G + S+ + R +++ ++SK
Sbjct: 63 VLAGVKLEEDSPYPDTPNQGNLIVNVELLPLAYETFEPGPPDENSIELARIVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
IDL L + +KVW + VD+ VL+YDGN+L C +A++AA+ + P V GD+I I
Sbjct: 123 AIDLSKLVIAPGKKVWTLWVDVYVLDYDGNILDACMLASIAAIYDTKLPKVEVEGDEIKI 182
Query: 576 HSAAEKDPIPMTILHYPVT 594
+ E+ IP+ ++YPV
Sbjct: 183 NK-EERLSIPL--VNYPVV 198
>gi|403346784|gb|EJY72799.1| Polymyositis/scleroderma autoantigen 1 [Oxytricha trifallax]
Length = 463
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 441 ENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMA-SPQFETGRQT-- 497
ENG+ + + + +L Q S +V P+ +PNEG N E S + S ++ + T
Sbjct: 41 ENGQVLL--KIGKTHILTQASLKLVSPQPGKPNEGFFRFNTEFSSLLHSAEYTSSINTLS 98
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAA 557
+ V I RF++K K S+ D ESLC+V VW++ VDL +LN DGN++ C IA++
Sbjct: 99 EMRVDITRFIDKVLKSSRATDRESLCIVQGRLVWSLSVDLFLLNEDGNVMDACFIASVLC 158
Query: 558 LAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNG 602
L + R P+VT + DQ+ I+ K + + H P+ ++ G
Sbjct: 159 LMNTRLPEVTISKDQVKINYEKVK---YLNVHHIPICTTFYFIEG 200
>gi|432328766|ref|YP_007246910.1| RNase PH-related exoribonuclease [Aciduliprofundum sp. MAR08-339]
gi|432135475|gb|AGB04744.1| RNase PH-related exoribonuclease [Aciduliprofundum sp. MAR08-339]
Length = 270
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V P P +G+L NAELSPMASP FE G + ++ + R +++ +E
Sbjct: 61 TKVLVGVKIEPGTPFPDTPAQGILTTNAELSPMASPTFEPGPPGEEAIELARVVDRGIRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
IDLE L + E+VW V +D++VL+YDGNL ALAAL P
Sbjct: 121 GHAIDLEKLVIEEGEQVWVVFIDIHVLDYDGNLFDASGYGALAALTEATVPAAK------ 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYA 598
H E +P + HYPV +++A
Sbjct: 175 --HELGEDFKLP--VQHYPVPVTFA 195
>gi|341582107|ref|YP_004762599.1| exosome complex RNA-binding protein Rrp42 [Thermococcus sp. 4557]
gi|340809765|gb|AEK72922.1| exosome complex RNA-binding protein Rrp42 [Thermococcus sp. 4557]
Length = 269
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 18/213 (8%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
EI AG MRD + KE KR D+ E ++ +
Sbjct: 2 EIMAGIMRDHI-----------------LALLKEGKRVDGRGLEDYRDLEIKVNVIEKAE 44
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
+ W + ++VL V +M P P+ G++ N EL P+ASP FE G + ++ +
Sbjct: 45 GSAWV-RLGNTQVLVGVKVDMGEPFPDLPDRGVITTNVELVPLASPSFEPGPPDENAIEL 103
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R +++ +ES+ ++LE L +V + V V +D++VL++DGNLL I A+AAL R
Sbjct: 104 ARVVDRGIRESQAVELEKLVIVPGKLVRVVFIDVHVLDHDGNLLDASGIGAIAALLSTRM 163
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
P V + + E +P+P+ + PVT++
Sbjct: 164 PKVVYNEETDEVEVLDEYEPLPVRRIPIPVTMA 196
>gi|14591332|ref|NP_143410.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus horikoshii
OT3]
gi|29336585|sp|O59224.1|ECX2_PYRHO RecName: Full=Probable exosome complex exonuclease 2
gi|3257977|dbj|BAA30660.1| 274aa long hypothetical autoantigen like protein [Pyrococcus
horikoshii OT3]
Length = 274
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 22/244 (9%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
EI AG MRD + + KE KR D D+ E I E
Sbjct: 5 EIVAGIMRDHI-----------------INLLKEGKRIDDRGFEDYRPIEIEVGI-IEKA 46
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
E + ++VL + + P PN G++ N EL P+ASP FE G + ++ +
Sbjct: 47 EGSALVKLGSTQVLVGIKTTLGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDERAIEL 106
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R ++ +ES+ ++LE + +V + V V +D++VL++DGNL+ IA++AAL + +
Sbjct: 107 ARVTDRGIRESRALNLEKMVIVPGKIVRVVFIDVHVLDHDGNLMDAIGIASIAALLNAKV 166
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALA 623
P V + + EK+P+P+ + PVT + G+ P E + +D L
Sbjct: 167 PKVEYNEETGEVEILEEKEPLPVERIPIPVTFAKI----GNILVVDPSLEEELVMDGRLT 222
Query: 624 LSQD 627
++ D
Sbjct: 223 VTTD 226
>gi|315427142|dbj|BAJ48757.1| exosome complex component RRP42 [Candidatus Caldiarchaeum
subterraneum]
gi|315427161|dbj|BAJ48775.1| exosome complex component RRP42 [Candidatus Caldiarchaeum
subterraneum]
gi|343485776|dbj|BAJ51430.1| exosome complex component RRP42 [Candidatus Caldiarchaeum
subterraneum]
Length = 271
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 410 QTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKA 469
+ + K KR + + + E T++ E + +++L + + P
Sbjct: 14 KIYELLKIGKRIDEREPLQYRKIEIATNV-VEKAHGSALVSLGKTKILTGIKVEVGTPYP 72
Query: 470 TRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK 529
RPNEG+ +NAEL P+AS FE G + ++ ++R +++ +ESK I++E LC+V +K
Sbjct: 73 DRPNEGVFTVNAELLPLASKTFEPGPPDERAIELSRIVDRVIRESKAIEVEKLCIVEGQK 132
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTIL 589
V+ + +D VL+YDGN ++A+AAL P V D + EK +PM L
Sbjct: 133 VYMIFIDCYVLDYDGNYFDASVLSAVAALRTMTLP-VYRVVDGRVEAVPGEKMKLPMRTL 191
Query: 590 HYPVTISYAVFN 601
PV+++ A+
Sbjct: 192 --PVSVTMALIR 201
>gi|406701815|gb|EKD04926.1| exosome complex exonuclease rrp45 [Trichosporon asahii var. asahii
CBS 8904]
Length = 490
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 7/100 (7%)
Query: 501 VMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAH 560
VMI R LEK + ++ +D E+LC+VA EKV + GNLL C SIAA+ AL H
Sbjct: 101 VMITRLLEKSIRRTEAVDREALCIVAGEKVSS-------RGEAGNLLDCASIAAMTALKH 153
Query: 561 FRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
FR P+V GD++I+HS E+ P+P+ I H P+ +++A F
Sbjct: 154 FRKPEVEVHGDEVIVHSPDERAPLPLAIHHNPLCLTFAYF 193
>gi|397652060|ref|YP_006492641.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus furiosus
COM1]
gi|393189651|gb|AFN04349.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus furiosus
COM1]
Length = 277
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
EI AG MRD + + KE KR D D+ E + E
Sbjct: 5 EIVAGIMRDYI-----------------LNLLKEKKRIDDRGFEDYRPIEVEVGV-IEKA 46
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
E + ++VL + + P PN G++ N EL P+ASP FE G + ++ +
Sbjct: 47 EGSALVKLGNTQVLVGIKATLGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDERAIEL 106
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R +++ +ES+ ++LE + + + V V +D++VL++DGNL+ I A+AAL + R
Sbjct: 107 ARVIDRGIRESRALNLEKMVIAPGKIVRVVFIDVHVLDHDGNLMDAIGIGAIAALLNARV 166
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
P V + + EK+P+P+ + PVT +
Sbjct: 167 PKVLYNEETGEVEILEEKEPLPVEKIPIPVTFA 199
>gi|443919691|gb|ELU39792.1| exosome complex exonuclease rrp45 [Rhizoctonia solani AG-1 IA]
Length = 372
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ LA VS M P+ RP EG + I+ ELSPMA+ ++ GR + + L +
Sbjct: 135 TSALANVSATMTRPRPDRPYEGTVTIHTELSPMAAAIYDAGRLFEGVRPLTEKLCVFSPD 194
Query: 514 SK-CIDLESLCVVA---EEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
S+ ID L + +KVW +R+ ++VL+ +GN+L C +AA+ AL HFR PDV
Sbjct: 195 SRYAIDSPLLTLNPFGLGQKVWALRLTIHVLSDEGNMLDCACLAAVTALRHFRRPDVEVV 254
Query: 570 GDQIII------HSAAEKDPIPMTILHYPVTISYAVFN 601
GD++II H E+ P+P+++ H P +S+ +
Sbjct: 255 GDEVIIVGIRFSHDPEERAPLPLSLHHTPYCVSFTFLD 292
>gi|223477853|ref|YP_002582207.1| exosome complex exonuclease RRP43 [Thermococcus sp. AM4]
gi|214033079|gb|EEB73907.1| exosome complex exonuclease RRP43 [Thermococcus sp. AM4]
Length = 273
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
E+ AG MRD + + KE KR +D S E + I + G
Sbjct: 5 EVMAGIMRDRI-----------------LNLLKEGKR------IDGRSFEEYRDIEIKTG 41
Query: 444 ---EAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTD 498
+A WV+ + VL + ++ P P+ G++ N EL P+ASP FE G +
Sbjct: 42 FIEKAEGSAWVRLGGTRVLVGIKVDVGEPFPDLPDRGVMTTNVELVPLASPTFEPGPPDE 101
Query: 499 TSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
++ + R +++ +ES+ ++LE L +V + V V +D++VL++DGNL +AA+AAL
Sbjct: 102 RAIELARVIDRGIRESQAVELEKLVIVPGKLVRVVFIDVHVLDHDGNLFDATGLAAMAAL 161
Query: 559 AHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQL 618
R P V + I E +P+P+ + PVT + GS P E +
Sbjct: 162 LTTRVPKVEYNEETGEIVKLDEYEPLPVRRIPLPVTFAKI----GSSIIVDPNLDEETVM 217
Query: 619 DTALALSQD 627
D+ + ++ D
Sbjct: 218 DSRITITTD 226
>gi|212223176|ref|YP_002306412.1| exosome complex RNA-binding protein Rrp42 [Thermococcus onnurineus
NA1]
gi|226740342|sp|B6YSE7.1|ECX2_THEON RecName: Full=Probable exosome complex exonuclease 2
gi|212008133|gb|ACJ15515.1| 3'-5' exoribonuclease [Thermococcus onnurineus NA1]
Length = 272
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 410 QTFHFWKESKRA-----QDWTDVDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSC 462
KE KR +D+ D++ I G A WVK ++VL +
Sbjct: 14 HILALLKEGKRVDGRSLEDYRDLEI----KINVIEKAEGSA----WVKLGNTQVLVGIKV 65
Query: 463 NMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESL 522
+M P P +G++ N EL P+ASP FE G + ++ + R +++ +ES ++LE L
Sbjct: 66 DMGEPFPDLPEKGVITTNVELVPLASPSFEPGPPDERAIELARVVDRGIRESGAVELEKL 125
Query: 523 CVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKD 582
+V + V V +D++VL++DGNLL I A+AAL + P V + + E +
Sbjct: 126 VIVPGKLVRVVFIDVHVLDHDGNLLDASGIGAIAALMSAKMPKVVYDEESGEVQILDEYE 185
Query: 583 PIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQKL 631
P+P++ + PVTI+ G P E + +D + ++ D +
Sbjct: 186 PLPVSKMPIPVTIAKV----GGNLLVDPNLDEELVMDGRITITTDENGM 230
>gi|302348935|ref|YP_003816573.1| exosome complex exonuclease 2 [Acidilobus saccharovorans 345-15]
gi|302329347|gb|ADL19542.1| Probable exosome complex exonuclease 2 [Acidilobus saccharovorans
345-15]
Length = 280
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Query: 428 DFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELSP 485
DF + N + +A WVK ++VL V + IP PNEG+L +N+EL+P
Sbjct: 33 DFATPRNLSIQVGVIDKADGSAWVKLGNTQVLVGVKLEVGIPYRDTPNEGVLQVNSELTP 92
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
+ASP FE G + +V ++R +++ ++ K IDL SL + EK W + +D+ VL+YDGN
Sbjct: 93 VASPTFEPGPPDENAVELSRVIDRSLRDPKAIDLSSLVIRPGEKAWVLWIDIYVLDYDGN 152
Query: 546 LLGCCSIAALAALAHFRHPDV--TSTGDQII 574
+ +AAL + + P+ T +G+ II
Sbjct: 153 YFDASMLGVMAALMNTKVPEYEETESGEIII 183
>gi|288560608|ref|YP_003424094.1| exosome complex RNA-binding protein Rrp42 [Methanobrevibacter
ruminantium M1]
gi|288543318|gb|ADC47202.1| exosome complex RNA-binding protein Rrp42 [Methanobrevibacter
ruminantium M1]
Length = 263
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 76/122 (62%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ V + P A PN G+L N EL PMA+P FE G + S+ + R +++ +E
Sbjct: 54 TQVIVGVKPTIGEPFADTPNLGVLMTNCELLPMAAPGFEPGPPSPESIELARVVDRGIRE 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +DLE LC+ +KVW + +DL+V++YDGNL C ++A ++AL + + P D++
Sbjct: 114 SELVDLEKLCIEEGKKVWMLFIDLHVIDYDGNLFDCANLAVMSALLNTKLPVAEYIDDEV 173
Query: 574 II 575
++
Sbjct: 174 VL 175
>gi|389860736|ref|YP_006362976.1| ribosomal RNA-processing protein RRP42 [Thermogladius
cellulolyticus 1633]
gi|388525640|gb|AFK50838.1| ribosomal RNA-processing protein RRP42 [Thermogladius
cellulolyticus 1633]
Length = 282
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P RPNEG+L ++AE P+ASP FE G + ++ + R +++ +E
Sbjct: 61 TQVIAGVKAELGTPFEDRPNEGVLQVHAEFVPLASPSFEPGPPNEEAIEVARVIDRSLRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
K +DL L + W + D+ V+++DGN+L IA++ ALA + P + +T + I
Sbjct: 121 PKVVDLSKLVIQPGRLAWVIYDDVYVIDHDGNILDTGMIASMIALATSKLPRLDTTAEGI 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDR----- 628
+ + P+P+ L VT+ G P E +DT L++S D
Sbjct: 181 KVVYGTKDTPLPINTLVTTVTMGVL----GDILVVDPSLEEESVIDTFLSISVDEKGRIV 236
Query: 629 --QKLGVDSAYANLVNKTDRILLDEGEK 654
QK G S ++ I L GE+
Sbjct: 237 GLQKRGPRSITPKTLDSAVEIALKAGEQ 264
>gi|18977939|ref|NP_579296.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus furiosus DSM
3638]
gi|29336823|sp|Q8U0M0.1|ECX2_PYRFU RecName: Full=Probable exosome complex exonuclease 2
gi|18893709|gb|AAL81691.1| hypothetical protein PF1567 [Pyrococcus furiosus DSM 3638]
Length = 277
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
EI AG MRD + + KE KR D D+ E + E
Sbjct: 5 EIVAGIMRDYI-----------------LNLLKEKKRIDDRGFEDYRPIEVEVGV-IEKA 46
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
E + ++VL + + P PN G++ N EL P+ASP FE G + ++ +
Sbjct: 47 EGSALVKLGNTQVLVGIKATLGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDERAIEL 106
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R +++ +ES+ ++LE + + + V V +D++VL++DGNL+ I A+AAL + R
Sbjct: 107 ARVIDRGIRESRALNLEKMVIAPGKIVRVVFIDVHVLDHDGNLMDAIGIGAIAALLNARV 166
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYA 598
P V + + EK+P+P+ P+++++A
Sbjct: 167 PKVLYNEETGEVEILEEKEPLPVE--KIPISVTFA 199
>gi|294873385|ref|XP_002766601.1| Exosome complex exonuclease RRP45, putative [Perkinsus marinus ATCC
50983]
gi|239867633|gb|EEQ99318.1| Exosome complex exonuclease RRP45, putative [Perkinsus marinus ATCC
50983]
Length = 418
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 11/154 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQ-FETGR--------QTDTSVMIN 504
+ + A V+ + P + RP EG L IN E PMA+P +G QT + +
Sbjct: 34 TRIRAVVTGQLTSPPSNRPREGRLSINVEAGPMAAPAVLPSGNSSGLVGSAQTPEGISLC 93
Query: 505 RFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
LE+ K S +D+E+LC+ + VW +R+D++VL+ +GN+ +IA+ AL H+R
Sbjct: 94 NQLERMLKGSNAVDVEALCIQSGSLVWELRLDVHVLSDNGNVGDAAAIASTVALRHYRRA 153
Query: 565 DVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYA 598
+V+ +II + DPIP+++ H P+ +++A
Sbjct: 154 EVSVVNGEIIYKP--DLDPIPLSVHHMPIPVTFA 185
>gi|20093818|ref|NP_613665.1| exosome complex RNA-binding protein Rrp42 [Methanopyrus kandleri
AV19]
gi|29336820|sp|Q8TYC2.1|ECX2_METKA RecName: Full=Probable exosome complex exonuclease 2
gi|19886741|gb|AAM01595.1| Predicted exosome subunit, predicted exoribonuclease related to
RNase PH [Methanopyrus kandleri AV19]
Length = 267
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 7/188 (3%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
IS NG A+ + ++++ V + P PNEG L +NAEL P+A P FE G
Sbjct: 42 ISKANGSALV--RLGNTQLVVGVKLEVGRPYPDSPNEGALAVNAELVPLADPSFEPGPPD 99
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAA 557
+ ++ ++R +++ +ES+ IDLE LC+ E W VD++VL++DGNL I +++A
Sbjct: 100 ENAIELSRVVDRGIRESEMIDLEELCIEEGEHCWVTFVDIHVLDHDGNLFDASMIGSVSA 159
Query: 558 LAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQ 617
L+ P D++ E+D P+ I +P++++ A G P E +
Sbjct: 160 LSITEVPKAEVVDDEV---EVMEEDTEPLAINDFPISVTIAKV--GEYLLVDPCLEEEVI 214
Query: 618 LDTALALS 625
+DT L ++
Sbjct: 215 MDTRLTVT 222
>gi|348678132|gb|EGZ17949.1| hypothetical protein PHYSODRAFT_502345 [Phytophthora sojae]
Length = 517
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 12/156 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTD-------TSVMINRF 506
+ V+ V +V P RP EG L ELSPMASP FE + + R
Sbjct: 61 TRVIGNVHGEIVPPFPDRPTEGFLHFAVELSPMASPSFEAAASAGRGAASSVAAAELARL 120
Query: 507 LEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+E+ +ES+ +D E+L VVA EKVW + ++V+++ GNL+ S+AA+AAL H+R P+V
Sbjct: 121 VERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRPEV 180
Query: 567 -----TSTGDQIIIHSAAEKDPIPMTILHYPVTISY 597
T+ + ++S E +P+++ H P++IS+
Sbjct: 181 AVKEGTAGNGGVTVYSVDEHAAVPLSLHHIPISISF 216
>gi|315229928|ref|YP_004070364.1| exosome complex exonuclease 2 [Thermococcus barophilus MP]
gi|315182956|gb|ADT83141.1| exosome complex exonuclease 2 [Thermococcus barophilus MP]
Length = 270
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 27/244 (11%)
Query: 410 QTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVK--PSEVLAQVSCNMVIP 467
KE KR + D E ++ E E WVK ++VL + ++ P
Sbjct: 11 HIVELLKEKKRIDGRSLEDLRPLEVKVNV-IEKAEG--SAWVKLGNTQVLVGIKLDLGEP 67
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P++G++ N EL P+ASP FE G + ++ + R +++ +ES+ IDLE L ++
Sbjct: 68 FPDLPDKGVMTTNVELVPLASPTFEPGPPDERAIELARVVDRGIRESQAIDLEKLVIIPG 127
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV---TSTGDQIIIHSAAEKDPI 584
+ V V +D++VL++DGNL+ I A+AAL + P + TG+ +++ E +P+
Sbjct: 128 KLVRVVFIDVHVLDHDGNLVDATGIGAIAALLSTKMPKIEYNEETGEVMMLD---EYEPL 184
Query: 585 PMTILHYPVTISYAVFNGGSEGSTV---PGFTECIQLDTALALSQDRQKLGVDSAYANLV 641
P+T P+ +S+A G T+ P E +D L ++ D ++ Y + V
Sbjct: 185 PVT--KIPIPVSFAKIGG-----TIVVDPNLEEEHVMDGKLTITTD------ENGYISAV 231
Query: 642 NKTD 645
K++
Sbjct: 232 QKSE 235
>gi|429216659|ref|YP_007174649.1| RNase PH-related exoribonuclease [Caldisphaera lagunensis DSM
15908]
gi|429133188|gb|AFZ70200.1| RNase PH-related exoribonuclease [Caldisphaera lagunensis DSM
15908]
Length = 284
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 107/193 (55%), Gaps = 14/193 (7%)
Query: 412 FHFWKESKRAQDWTDVDFMS----SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
+ +++ +RA + DF S S + NG A+ + ++VLA + P
Sbjct: 20 LNLYRKGQRADER---DFYSPRKISIQTNVLEKANGSALVK--LGNTQVLAGIKIEPGEP 74
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
A P+EG+L ++AEL P+ASPQFE G + ++ + R +++ ++ K +DL+SL +
Sbjct: 75 FADMPDEGVLQVHAELVPLASPQFEPGPPDENAIELARVIDRSLRDPKAVDLKSLVIRPG 134
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV--TSTGDQIIIHSAAEKDPIP 585
+KVW + +DL +L+YDGNL +A++AAL+ R P+ TG+ + + ++ IP
Sbjct: 135 DKVWMLWLDLYILDYDGNLFDASMLASMAALSTARMPEFEEMETGEIKLTNKISD---IP 191
Query: 586 MTILHYPVTISYA 598
+ + VT++ A
Sbjct: 192 IKLNKRIVTVTTA 204
>gi|449018566|dbj|BAM81968.1| similar to exosome complex exonuclease RRP45 [Cyanidioschyzon
merolae strain 10D]
Length = 519
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Query: 457 LAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINR--FLEKCFKES 514
A +C +V P RP EG + + +SP AS + Q+D FLE+ +ES
Sbjct: 54 FATTTCRVVAPPPHRPTEGWIRVVYGISPGAS-ERTLLEQSDAVSFSEEAVFLERILRES 112
Query: 515 KCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT----STG 570
+CID ESLC+VA + + V V + V + DG+ L S+AAL +L FR PD T G
Sbjct: 113 RCIDPESLCIVAGKYAFQVTVQVCVESLDGSGLFYASLAALGSLQRFRRPDFTIERHGYG 172
Query: 571 DQ-IIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGS 607
D+ + + S E+ P+P+ + YPV + YA+F GS
Sbjct: 173 DERVRLFSPRERPPVPLQLQVYPVILEYALFFDEHRGS 210
>gi|15920654|ref|NP_376323.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus tokodaii str.
7]
gi|29336897|sp|Q975G9.1|ECX2_SULTO RecName: Full=Probable exosome complex exonuclease 2
gi|342306197|dbj|BAK54286.1| exosome core subunit Rrp42 [Sulfolobus tokodaii str. 7]
Length = 275
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA V P PN+G L +N EL P+A FE G + ++ + R +++ ++SK
Sbjct: 63 VLAGVKLEEEEPFPDTPNQGNLVVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L ++ +KVW VD+ VL+Y GN+L C++AA+AAL + + P V GD + I
Sbjct: 123 AVDLSKLVIIPGKKVWTAWVDVYVLDYGGNVLDACTLAAVAALYNTKLPKVEIEGDNVKI 182
Query: 576 HSAAEKDPIPMTILHYP-VTISYA 598
+ D P+ YP VT++ A
Sbjct: 183 IKEEKTDVTPIA---YPVVTVTVA 203
>gi|156363851|ref|XP_001626253.1| predicted protein [Nematostella vectensis]
gi|156213123|gb|EDO34153.1| predicted protein [Nematostella vectensis]
Length = 276
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSS-ENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R DF + N SIS NG A+ + + V+ V+ P A
Sbjct: 16 QFLKENIRPDGRGLFDFRETILNVGSISTANGSALV--KLGNTTVVCGVTAEFAEPAADV 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
PN+G + N +L P+ SP F G ++ + +++ F++ S+ IDLE LC+V + VW
Sbjct: 74 PNKGFIVPNVDLPPLCSPSFRPGPPSEHAQVLSTFIDNLITNSQLIDLEDLCIVDGKLVW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ +DL L+YDGN+ IA LAAL + R VT + + KD I + +
Sbjct: 134 VLYIDLMCLDYDGNVADAAVIAMLAALQNTRLHTVTINEETETPEPSENKD-IHLKLKSM 192
Query: 592 PVTISYAVFN 601
PV +++ +F+
Sbjct: 193 PVAVTFGIFD 202
>gi|390960832|ref|YP_006424666.1| exosome complex RNA-binding protein Rrp42 [Thermococcus sp. CL1]
gi|390519140|gb|AFL94872.1| exosome complex RNA-binding protein Rrp42 [Thermococcus sp. CL1]
Length = 269
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 32/220 (14%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRA-----QDWTDVDFMSSENWTSI 438
EI AG MRD + KE KR +D+ D++ I
Sbjct: 2 EIMAGIMRDHI-----------------LALLKEGKRVDGRGLEDYRDLEI----RVNVI 40
Query: 439 SAENGEAVWCPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
G A WVK ++VL + +M P P+ G++ N EL P+ASP FE G
Sbjct: 41 EKAEGSA----WVKLGNTQVLVGIKVDMGEPFPDLPDRGVITTNVELVPLASPSFEPGPP 96
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ ++ + R +++ +ES ++LE L +V + V V +D++VL++DGNLL I A+A
Sbjct: 97 DENAIELARVVDRGIRESGAVELEKLVIVPGKLVRVVFIDVHVLDHDGNLLDATGIGAIA 156
Query: 557 ALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
AL + P V + + E +P+P+ + PVT +
Sbjct: 157 ALLSTKIPKVVYNEETDEVEVLDEYEPLPVRRVPIPVTFA 196
>gi|340053933|emb|CCC48226.1| exosome complex exonuclease [Trypanosoma vivax Y486]
Length = 346
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 12/145 (8%)
Query: 460 VSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINR-----FLEKCFKES 514
++ N+V P RP GLL + L +T R++ T+ + + FL++ +
Sbjct: 70 IASNLVEPMPQRPKHGLLHFSVRL-------LQTERESPTATALTQTKLAAFLDRLIRTG 122
Query: 515 KCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQII 574
+D +LCV+ E+VW++ +D+ VLN +GN AA+A L H R P++T G+ I
Sbjct: 123 GVLDTAALCVLPGERVWSITIDVTVLNDEGNSSDAVVWAAIALLLHHRRPELTIRGNSIT 182
Query: 575 IHSAAEKDPIPMTILHYPVTISYAV 599
+H E++P+P+++ H P+ ++AV
Sbjct: 183 VHPPHEREPVPLSVHHTPLPFTFAV 207
>gi|399218325|emb|CCF75212.1| unnamed protein product [Babesia microti strain RI]
Length = 278
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 83/146 (56%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL V+ ++ P +RP EG + E+ + + FE G+ T+ + I +E ++S
Sbjct: 51 VLCTVNGEVIPPVDSRPTEGFYHFHVEIGSLTTVGFEPGKPTEQEMFICSTIEHLLRDSG 110
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
I+ ESLC+V+ + VW++RVD+ VL GN L C+++A+A+ HF+ V G++I +
Sbjct: 111 TIETESLCIVSGKYVWSIRVDMLVLEDAGNALDACALSAVASTMHFKRQQVKIDGEKIEL 170
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFN 601
S P + I H P+ +++A+ +
Sbjct: 171 LSLDHFTPGELFIHHIPIFVTFAIVD 196
>gi|330835837|ref|YP_004410565.1| exosome complex RNA-binding protein Rrp42 [Metallosphaera cuprina
Ar-4]
gi|329567976|gb|AEB96081.1| exosome complex RNA-binding protein Rrp42 [Metallosphaera cuprina
Ar-4]
Length = 283
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA V P + PN+G L +NAEL P+A FE G + ++ ++R +++ ++SK
Sbjct: 63 VLAGVKIEEDEPYSDTPNQGNLVVNAELLPLAYETFEPGPPDENAIELSRVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL +L + ++VW V VD++VL+Y GN+L C+++A+AAL + P + + I I
Sbjct: 123 AVDLSALVIEPGKRVWTVWVDISVLDYGGNILDACTLSAVAALYDTKLPRIVNDNGTINI 182
Query: 576 HSAAEKDPIPMTILHYPV-TISYA 598
+ P P + YPV T++ A
Sbjct: 183 VKEDKTTPFP---IRYPVATVTIA 203
>gi|301097178|ref|XP_002897684.1| exosome complex exonuclease RRP45-like protein [Phytophthora
infestans T30-4]
gi|262106705|gb|EEY64757.1| exosome complex exonuclease RRP45-like protein [Phytophthora
infestans T30-4]
Length = 513
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 12/162 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMIN-------RF 506
+ V+ V +V P RP EG L ELSPMASP FE + R
Sbjct: 61 TRVIGNVHGEIVPPFPDRPTEGFLHFAVELSPMASPSFEASASASRGAASSVAAAELARL 120
Query: 507 LEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+E+ +ES+ +D E+L VVA EKVW + ++V+++ GN++ S+AA+A+L H+R P+V
Sbjct: 121 VERGLRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNIVDAASLAAIASLMHYRRPEV 180
Query: 567 T----STGD-QIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+TG+ + ++S E +P+++ H P++IS+
Sbjct: 181 AVKEGTTGNGGVTVYSVDEHSAVPLSLHHIPISISFCFLQAA 222
>gi|347524282|ref|YP_004781852.1| 3' exoribonuclease [Pyrolobus fumarii 1A]
gi|343461164|gb|AEM39600.1| 3' exoribonuclease [Pyrolobus fumarii 1A]
Length = 327
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA V ++ P P+E +L ++AE P+ASP FE G + ++ + R +++ +E +
Sbjct: 63 VLAGVKMDITQPFPDTPDEAVLVVHAEFVPLASPVFEPGPPDENAIELARVVDRALREIR 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+ L+ L + + VW + VD+ VLN+DGNLL +A++AAL R P V TG+ I
Sbjct: 123 AVALDRLVLEPGKAVWRIYVDIYVLNHDGNLLDASMLASMAALMATRVPAVRRTGEGFAI 182
Query: 576 HSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDT--ALALSQDRQKLGV 633
+P+ + VT++ A GS P F E + D A+A+S D + G+
Sbjct: 183 ERGRYTGLLPIN--NRVVTVTVAKI--GSRMVVDPSFDEELVADVRLAVAVSDDNRIAGL 238
>gi|449450304|ref|XP_004142903.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Cucumis
sativus]
Length = 393
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 127/272 (46%), Gaps = 53/272 (19%)
Query: 74 YWTDLFVRYFLFQTDS-NIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-- 130
+W D+ YF+ +S DDL+FFVRK + + T R+ + KL
Sbjct: 44 FWHDVMDLYFIRGKESRGRQDDDLVFFVRKVKSQGYGSDDDNGGTSPYFVRRWASKLDNL 103
Query: 131 IGDP--DVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQV--------LKRHSQKVYA 180
+GD DVDW + YLN+I H +T+T+AIC+ ++ Q + + + VYA
Sbjct: 104 VGDASVDVDWRRSFYLNLIAHT-SFTVTVAICSHLVLRNHQAGHTTSLSPIYKVVKTVYA 162
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG-- 234
SPSR +D+K EVE YP +CF VD+F+ F +++ + + CV L A D A
Sbjct: 163 SPSRVNFHLDSKKEVETTPAYPDICFAVDDFDSTFDAVVLTETDHCYCVLLNAHDGAAFP 222
Query: 235 --------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRM 268
+ K +F G + Y ++ YDA S +F +
Sbjct: 223 AKDNAENCNSSNFVASSLDSDSQNTKNSKITLFSGFVSYQMVRDAYDAGKS---RFGSLL 279
Query: 269 SFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
S G +++ + + + MKGP G+G E+AV+
Sbjct: 280 SLG----HASGKTDKIYMKGPGGRGEVEVAVS 307
>gi|52548824|gb|AAU82673.1| 3'-5' exoribonuclease [uncultured archaeon GZfos19A5]
Length = 257
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 72/112 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EVL V + P P++G++ NAEL P+ASP+FE+G + S+ + R +++ +
Sbjct: 56 TEVLVGVKVELGTPFPDTPDKGVIITNAELVPLASPKFESGPPNENSIQLARVVDRGIRG 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
S+ IDL+ LC+ EKVW V +D++VL+ +GNL+ ++ A+ +L + R P+
Sbjct: 116 SETIDLDKLCIEEGEKVWMVFIDIHVLDDNGNLVDAAALGAITSLLNLRIPN 167
>gi|52549527|gb|AAU83376.1| 3'-5' exoribonuclease [uncultured archaeon GZfos27G5]
Length = 257
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 72/112 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EVL V + P P++G++ NAEL P+ASP+FE+G + S+ + R +++ +
Sbjct: 56 TEVLVGVKVELGTPFPDTPDKGVIITNAELVPLASPKFESGPPNENSIQLARVVDRGIRG 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
S+ IDL+ LC+ EKVW V +D++VL+ +GNL+ ++ A+ +L + R P+
Sbjct: 116 SETIDLDKLCIEEGEKVWMVFIDIHVLDDNGNLVDAAALGAITSLLNLRIPN 167
>gi|224129808|ref|XP_002320676.1| predicted protein [Populus trichocarpa]
gi|222861449|gb|EEE98991.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 124/281 (44%), Gaps = 69/281 (24%)
Query: 72 TSYWTDLFVRYFLFQTDSNIDCDD-LLFFVRKKYIKTSSRNLPKFETEVEVF-RKDSRKL 129
+ +W D+ YF+ +S DD L+FFVRK+ + N E+ F R+ + KL
Sbjct: 42 SRFWHDVLDLYFIRGKESRRKQDDDLVFFVRKRNTQGYGFN-DSVESAASYFVRRWAPKL 100
Query: 130 ----PIGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHS---------- 175
+VDW + YLN+I H YT+T+AIC++ QVL+ H
Sbjct: 101 DNLVSESSAEVDWRRSFYLNLIAHT-SYTVTVAICSQ------QVLRNHQAGQDTQLSPI 153
Query: 176 ----QKVYASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVEL 227
+ VYASPSR +D+K EVE YP +CF VD+F+ F +++ + + CV L
Sbjct: 154 YKVVKTVYASPSRVYFHLDSKKEVETTPAYPDICFAVDDFDSTFDAVVLTESDHCYCVLL 213
Query: 228 VASDRAG----------------------------SVKSVIFLGSIRYDALKRVYDARTS 259
A D A + K +F G + Y ++ YDA S
Sbjct: 214 NAHDGAAFPSDKELQDGSSSSNFCQKNDTSPGKEKNSKLTLFSGFVSYQMVREAYDAGKS 273
Query: 260 VSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
FG S + + + MKGP G+G E+AV+
Sbjct: 274 ---------RFGSLLGQSPGKTDRLYMKGPGGRGEVEVAVS 305
>gi|357145754|ref|XP_003573754.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Brachypodium
distachyon]
Length = 402
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 58/285 (20%)
Query: 74 YWTDLFVRYFLF-QTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVF-RKDSRKLP- 130
+W ++ +F+ + + + DDL+FFV +KT FE F R+ + KL
Sbjct: 67 FWHEMLDLFFVRGRVSKSREEDDLVFFVNS--MKTHG-----FEDPPPFFVRRWAPKLEK 119
Query: 131 ---IGDPDVDWEETVYLNMIIHQFDYTLTLAICT-------RTSPKHLQVLKRHSQKVYA 180
+ ++DWE + YLN++ H YT+T+AIC+ K L + + S+ VYA
Sbjct: 120 LINVSASEIDWERSFYLNLVAHT-SYTVTVAICSIGDLRNRAEKSKRLPPVYKVSKTVYA 178
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG-- 234
SP+R R+D + VE + YP +CF+VD+F++ F +++ D E CV L A D A
Sbjct: 179 SPTRVNFRLDRRKAVETVPAYPNICFSVDDFDDPFDAVVLSDPEHCYCVILNAHDGAAFP 238
Query: 235 ------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSF 270
K +F G + Y ++ YDA S KF +S
Sbjct: 239 EETKSKNDSSNIQCGANSGSNQVNPPKRTLFSGYVSYQNVREAYDAGKS---KFGSFLSL 295
Query: 271 GIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
G N++ + + M+GP+G+G E+AV+ E +PG
Sbjct: 296 G----QDNTKPDKLFMRGPEGRGEVEVAVSGIADQSHERSKKDPG 336
>gi|156101467|ref|XP_001616427.1| exosome complex exonuclease [Plasmodium vivax Sal-1]
gi|148805301|gb|EDL46700.1| exosome complex exonuclease, putative [Plasmodium vivax]
Length = 518
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ +++ +V P RPNEG++ +N ++ + + + +D + I +E+ K
Sbjct: 50 TKVICKITSEIVKPFDKRPNEGIIKVNLDIDSFTNVN-DNSQISDECLEIKNLIERILKS 108
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S ++LESLC++ +KVW + V++ V+ DGNL C ++A + L H+R+ +VT
Sbjct: 109 SNLLNLESLCIIPHKKVWCLLVNIIVIENDGNLYDSCYLSAYSGLVHYRNNEVTVDSSGN 168
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
II E + P++I + P+ ++A FN
Sbjct: 169 IIIEEGETNYTPLSIHNTPILTTFAYFN 196
>gi|374724588|gb|EHR76668.1| exosome complex component RRP42 [uncultured marine group II
euryarchaeote]
Length = 261
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V A V + P RP +G L AEL P+A ++E G + S+ + R +++ +ES
Sbjct: 57 VYAGVKFELRTPWPDRPAQGSLMCGAELRPVAHRKYEPGPPSPQSIELGRVVDRGIRESG 116
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
CID+ESLC+V EKVW V +D++VL+ GN+ C +AA+AAL
Sbjct: 117 CIDMESLCIVPGEKVWGVMIDIHVLSDGGNIFDACGLAAIAAL 159
>gi|449512119|ref|XP_004175654.1| PREDICTED: exosome complex component RRP45-like, partial
[Taeniopygia guttata]
Length = 379
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 58/78 (74%)
Query: 527 EEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPM 586
E +VW +R+D+++LN+DGN+ SIA + AL HFR PDV+ G+++ +++ E+DP+P+
Sbjct: 91 EPEVWQIRLDMHLLNHDGNITDAASIAGIVALCHFRRPDVSVQGEEVTVYTPEERDPVPL 150
Query: 587 TILHYPVTISYAVFNGGS 604
+I H P+ +S+A F+ G+
Sbjct: 151 SIHHMPICVSFAFFHQGT 168
>gi|225458900|ref|XP_002285434.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Vitis
vinifera]
gi|302142167|emb|CBI19370.3| unnamed protein product [Vitis vinifera]
Length = 396
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 72/294 (24%)
Query: 73 SYWTDLFVRYFLFQTDS-NIDCDDLLFFVRKKYIKTSSRN-----LPKFETEVEVFRKDS 126
S+W D+ YF+ +S DDL+FFVRK + N +P + + D
Sbjct: 44 SFWHDILDLYFICGRESRGRQDDDLIFFVRKLSLHGYGFNDHMEGIPPYFVRRWAPKLD- 102
Query: 127 RKLPIGDPDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHS----------- 175
+ + +VDW + YLN+I H +T+T+AIC+ QVL+ H
Sbjct: 103 KLVSENSAEVDWRRSFYLNLIAHT-SFTVTVAICSH------QVLRNHQTGQDSPLSPIY 155
Query: 176 ---QKVYASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELV 228
+ VYASPSR +D+K EVE + YP +CF VD+F+ F +++ + + CV L
Sbjct: 156 KVVKTVYASPSRVEFHLDSKKEVETIPAYPDICFAVDDFDSTFDAVVLTETDHCYCVLLN 215
Query: 229 ASDRAG----------------------------SVKSVIFLGSIRYDALKRVYDARTSV 260
A D A + K +F G + Y ++ YDA S
Sbjct: 216 AHDGAAFPSEKTSPDCSSSNTSSLRIDTDSEKSKNTKLTLFSGFVSYQMVREAYDAGKS- 274
Query: 261 SNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEP 314
+F + G S + + + MKGP G+G E+AV+ GV + +P
Sbjct: 275 --RFGSLLLLG----QSAGKTDRLYMKGPGGRGEVEVAVS-----GVADQSQQP 317
>gi|297840645|ref|XP_002888204.1| hypothetical protein ARALYDRAFT_475360 [Arabidopsis lyrata subsp.
lyrata]
gi|297334045|gb|EFH64463.1| hypothetical protein ARALYDRAFT_475360 [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 129/268 (48%), Gaps = 47/268 (17%)
Query: 72 TSYWTDLFVRYFLFQTDSNI-DCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP 130
+++W +F YF+ +S DDLLFFVRK K+ + R+ + KL
Sbjct: 42 SNFWHGVFDVYFIRCMESRRRQDDDLLFFVRKLSCKSYGLTENEEAPAPYFVRRWAPKLD 101
Query: 131 --IGD--PDVDWEETVYLNMIIHQFDYTLTLAICTRTSPK--------HLQVLKRHSQKV 178
+G+ +VDW ++ YLNMI H YT+T+AIC+ + K L + + + V
Sbjct: 102 ELLGESLAEVDWRKSFYLNMIAHT-SYTVTVAICSNEALKTYQGNKDTKLSPIYKVVKTV 160
Query: 179 YASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG 234
YASPSR +D+K EVE YP +CF VD+F+ F +++ + + CV L + D A
Sbjct: 161 YASPSRVNFHLDSKKEVETTPAYPEICFAVDDFDSTFDAVVLTEKDHCYCVLLNSHDGAA 220
Query: 235 -------------------SVKS---VIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
SVK +F G + Y ++ Y+ N+F +S G
Sbjct: 221 FPSATVKDSSDSNTSADPRSVKDPKVTLFSGFVSYQMVREAYEGE---RNRFGSLLSLG- 276
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
++ + + + M+GP G+G E+AV+
Sbjct: 277 ---HNTGKADRLYMRGPGGRGEVEVAVS 301
>gi|57641568|ref|YP_184046.1| exosome complex RNA-binding protein Rrp42 [Thermococcus
kodakarensis KOD1]
gi|73919277|sp|Q5JIR7.1|ECX2_PYRKO RecName: Full=Probable exosome complex exonuclease 2
gi|57159892|dbj|BAD85822.1| exosome subunit Rrp42p homolog, 3'-5' exoribonuclease [Thermococcus
kodakarensis KOD1]
Length = 272
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 5/218 (2%)
Query: 410 QTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKA 469
+E KR + D+ E ++ + + W + ++VL + + P
Sbjct: 14 HIIELLREGKRIDGRSFEDYRDLEIKVNVIEKAEGSAWV-RLGDTQVLVGIKAELGEPFP 72
Query: 470 TRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK 529
P+ G++ N EL P+ASP FE G + ++ + R +++ +ES+ +DLE L +V +
Sbjct: 73 DLPDRGVITTNVELVPLASPTFEPGPPDENAIELARVVDRGIRESQAVDLEKLVIVPGKL 132
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTIL 589
V + +D++VL++ GNLL I A+AAL + P V + + E +P+P+
Sbjct: 133 VRVIFIDVHVLDHGGNLLDASGIGAIAALLSTKLPKVNYNEETGEVEILDEYEPLPVN-- 190
Query: 590 HYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQD 627
H P+ +++A G+ P E +D L ++ D
Sbjct: 191 HVPIPVTFAKI--GNSIVVDPSLDEERVMDGRLTITTD 226
>gi|326511815|dbj|BAJ92052.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 51/281 (18%)
Query: 74 YWTDLFVRYFLF-QTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPIG 132
+W ++ +F+ + + + DDL+FFV K +LP F V + KL
Sbjct: 20 FWHEMLDLFFVRGRVSRSREEDDLVFFVNSSMQKME--DLPPFF--VRRWAPTLEKLINA 75
Query: 133 DP-DVDWEETVYLNMIIHQFDYTLTLAICTRTS-------PKHLQVLKRHSQKVYASPSR 184
+ +VDWE + YLN++ H YT+T+A+C+ ++ K L + + S+ VYASPSR
Sbjct: 76 NSTEVDWERSFYLNLVAHT-SYTVTVALCSISNLRNRADKSKRLPPIYKVSKTVYASPSR 134
Query: 185 --RRMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG------ 234
R+D + VE + YP + F+VD+F++ F +++ D E CV L A D A
Sbjct: 135 VNFRLDQRKAVETVPAYPNIYFSVDDFDDPFDAVVLSDPEHCYCVILNAHDGAAFPEEPE 194
Query: 235 --------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFS 274
K +F G + Y ++ YDA S KF +S G
Sbjct: 195 SSNVSSNIKSGFNSGSNGESPPKRTLFSGYVSYQNVREAYDAGRS---KFGSFLSLG--- 248
Query: 275 NNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
N++++ + M+GP+G+G E+AV+ E P + G
Sbjct: 249 -QDNTKLDKLFMRGPEGRGEVEVAVSGIADQSRERPKKDSG 288
>gi|82752803|ref|XP_727434.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23483275|gb|EAA18999.1| similar to S. cerevisiae RRP45, putative [Plasmodium yoelii yoelii]
Length = 391
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 88/150 (58%), Gaps = 4/150 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ +++ +V P +PNEG++ IN ++ + + + TD + I +E+ FK
Sbjct: 50 TKVVCKITSEIVKPYDKKPNEGIIKINLDVESFNTYNNDISKITDECLEIKNLIERIFKA 109
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT--STGD 571
S ++ ESLC++ +KVW + +++ V+ DGNL C ++A +AL HFR+ +V +TG+
Sbjct: 110 SNILNFESLCIIPYKKVWCLLINITVIENDGNLYDSCYLSAYSALLHFRNNNVNIDNTGN 169
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
II E + +++ + P+ ++A FN
Sbjct: 170 VII--DEEEVNYTSLSVHNSPILTTFAYFN 197
>gi|428164594|gb|EKX33614.1| hypothetical protein GUITHDRAFT_147790 [Guillardia theta CCMP2712]
Length = 298
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL VS +V+P A RP EG++ ++ P+A + R ++T L++ +
Sbjct: 46 TRVLGVVSAALVVPPAERPAEGIVSLDLLPLPLADSSTDANRASETMKDGRAILQRAIVK 105
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+C+D+ESLCV+A + VW V V+L VL GN+ CCS+AA+ +L HF+ +V GD++
Sbjct: 106 SRCVDVESLCVIAGKAVWKVTVELKVLENGGNVTDCCSLAAVLSLNHFKLNEVIVDGDKV 165
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNG 602
+ + +E+ I+ P + V +G
Sbjct: 166 KVFAYSER-----VIIADPSKLEEQVMHG 189
>gi|52549122|gb|AAU82971.1| tRNA nucleotidyltransferase [uncultured archaeon GZfos24D9]
Length = 260
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL V P PN+G+L NAEL P+ASP+FE+G + S+ + R +++ + S+
Sbjct: 58 VLVGVKVEPGAPFPDTPNKGILMTNAELVPLASPEFESGPPNEDSIELARVVDRGIRGSE 117
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
IDLE LC+ EKVW V +D++ L+ DGNL+ ++ A+ +L + P
Sbjct: 118 TIDLEKLCIEEGEKVWMVFIDIHTLDNDGNLVDAAALGAITSLLNVTIP 166
>gi|294495472|ref|YP_003541965.1| ribosomal RNA-processing protein RRP42 [Methanohalophilus mahii DSM
5219]
gi|292666471|gb|ADE36320.1| ribosomal RNA-processing protein RRP42 [Methanohalophilus mahii DSM
5219]
Length = 261
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ V + P P EG++ + EL+P+ASP FE G + ++ + R +++ +E
Sbjct: 57 TQVMVGVKMQVGTPFPDSPAEGVIITSMELNPIASPDFEAGPPREKAIEMGRIVDRGIRE 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S ID+ LC+ E+VW V +D++VLN GN+L S+ A+AAL P
Sbjct: 117 SGAIDINKLCITEGEEVWMVFIDVHVLNNSGNILDAASLGAIAALMTTTVPS-------- 168
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDR----- 628
+ + PM + PV +S G E P + E +T + +S ++
Sbjct: 169 --EREGKGEDYPMPVREMPVGVSLVKI--GDEMVLDPTYGEESVCETRITISSNQDGSIC 224
Query: 629 --QKLGVDSAYANLVNKTDRILLDEGE 653
QK G S V K +I ++GE
Sbjct: 225 SMQKSGSGSLSPAQVVKASKIAKEKGE 251
>gi|374633081|ref|ZP_09705448.1| RNase PH-related exoribonuclease [Metallosphaera yellowstonensis
MK1]
gi|373524565|gb|EHP69442.1| RNase PH-related exoribonuclease [Metallosphaera yellowstonensis
MK1]
Length = 281
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA V P P +G L +NAEL P+A FE G + ++ ++R +++ ++SK
Sbjct: 63 VLAGVKIEEDEPYPDTPAQGNLVVNAELLPLAYETFEPGPPDENAIELSRVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
IDL SL + ++VW V VD++VL+Y GN+L C++AA+AAL + P V + I
Sbjct: 123 SIDLSSLVIEEGKRVWTVWVDISVLDYGGNVLDACTLAAVAALYDTKLPKVVKEDGSVKI 182
Query: 576 HSAAEKDPIPMTILHYP-VTISYA 598
+ + P L YP VT++ A
Sbjct: 183 NKEEKVVSFP---LKYPVVTVTVA 203
>gi|282165296|ref|YP_003357681.1| probable exosome complex exonuclease 2 [Methanocella paludicola
SANAE]
gi|282157610|dbj|BAI62698.1| probable exosome complex exonuclease 2 [Methanocella paludicola
SANAE]
Length = 259
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 70/112 (62%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S V+ V P P++G++ N EL P+ASP FETG + ++ + R +++ +E
Sbjct: 56 SRVVVGVKIQPGEPFMDTPDKGVIITNLELVPLASPTFETGPPREDAIELARVVDRGVRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
S+ IDL LC+ + +KVW V +D++VL++DGNL+ S+ A+AAL + P+
Sbjct: 116 SEAIDLSKLCIESGQKVWMVFIDVHVLDHDGNLMDAASMGAIAALMSAKIPN 167
>gi|435852007|ref|YP_007313593.1| RNase PH-related exoribonuclease [Methanomethylovorans hollandica
DSM 15978]
gi|433662637|gb|AGB50063.1| RNase PH-related exoribonuclease [Methanomethylovorans hollandica
DSM 15978]
Length = 260
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
I G A C + ++VL V + P P+EG++ N E++P+ASP FE G
Sbjct: 42 IEKAEGSAKVC--IGDTQVLVGVKLQVGAPFPDSPDEGVIITNLEMNPLASPDFEAGPPR 99
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAA 557
+ ++ + R ++ +ES IDL+ LC+ E+VW V +D++VLN DGNL + A+AA
Sbjct: 100 EGAIEMARVTDRGIRESGAIDLKELCITEGEEVWIVFIDVHVLNDDGNLQDASCLGAIAA 159
Query: 558 LAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQ 617
L + P + + + M I P+ ++ + + G E PG E
Sbjct: 160 LMTSKIPS----------EREGKGEDVKMPIRDIPIGVT--LVDIGGELMVDPGLAEETV 207
Query: 618 LDTALALSQDR 628
D+ L ++ ++
Sbjct: 208 ADSKLTIASNK 218
>gi|298674552|ref|YP_003726302.1| 3' exoribonuclease [Methanohalobium evestigatum Z-7303]
gi|298287540|gb|ADI73506.1| 3' exoribonuclease [Methanohalobium evestigatum Z-7303]
Length = 260
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Query: 412 FHFWKESKRAQD--WTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKA 469
+H + KR + + ++ +S E +AE V+ W ++++ V + P
Sbjct: 15 YHLMLKEKREDNRAFDEIRDISIETDIIGNAEGSAKVY--W-GDTQLIVGVKLQVGEPFP 71
Query: 470 TRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK 529
P++G++ + EL+P+ASP FE G + ++ I R +++ +ES IDL LC+ E+
Sbjct: 72 DTPDKGIIITSLELNPIASPDFEAGPPKEDAIEIARVVDRGIRESGAIDLNKLCITEGEE 131
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
VW V +D+NVLN DGN++ SI A+AAL P
Sbjct: 132 VWTVFIDVNVLNDDGNIMDAASIGAIAALMTTNIP 166
>gi|414879372|tpg|DAA56503.1| TPA: hypothetical protein ZEAMMB73_591171 [Zea mays]
Length = 545
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD- 571
ES+ +D+E LCV A + VW+VRVDL++L+ GN + +I ALAAL+ F P+ T GD
Sbjct: 70 ESRAVDMEFLCVFAGKHVWSVRVDLHILDNGGNPIDAANITALAALSTFWRPECTVGGDN 129
Query: 572 --QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 130 GQQVTVHDPEVRDPLPLTIHHMPIAVTFAYFGEGN 164
>gi|242399325|ref|YP_002994749.1| Probable exosome complex exonuclease 2 [Thermococcus sibiricus MM
739]
gi|242265718|gb|ACS90400.1| Probable exosome complex exonuclease 2 [Thermococcus sibiricus MM
739]
Length = 269
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 15/238 (6%)
Query: 410 QTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKA 469
KE KR DF T++ E E + ++VL + + P
Sbjct: 11 HILQLLKEDKRIDGRGLEDFRPLTVETNV-IEKAEGSALVKLGNTQVLVGIKVELGEPFP 69
Query: 470 TRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK 529
P+ G++ N E P+ASP FE G ++++ + R +++ +ES+ IDLE L +V +
Sbjct: 70 DLPDMGVITTNVEFVPLASPTFEPGPPDESAIELARIIDRGIRESQAIDLEKLVIVPGKL 129
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP--DVTSTGDQIIIHSAAEKDPIPMT 587
V + +D++VL++DGNLL I A+AAL + P D +++++ EK +P+
Sbjct: 130 VRVIFIDVHVLDHDGNLLDASGIGAIAALLSTKIPKVDYNEEIEEVVMLEEYEK--LPVK 187
Query: 588 ILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQKLGVDSAYANLVNKTD 645
+ PVT++ G P F E +D + ++ D ++ Y + V K++
Sbjct: 188 RIPIPVTLAKI----GGNLVVDPNFEEEQVMDGKITITTD------ENGYISAVQKSE 235
>gi|307207928|gb|EFN85487.1| Exosome complex exonuclease RRP43 [Harpegnathos saltator]
Length = 279
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N +SI + A++ + + V+ + + IPK P G + N ELSP+ SP+F
Sbjct: 36 SINVSSIVQADSSAIF--KLGSTTVVCGIKAELAIPKTDTPECGYIIPNVELSPLCSPKF 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G ++ + +I++ ++ K S IDL+ LC+ + VW + D+ LNY+G+++ C+
Sbjct: 94 RPGPPSEQAQVISKLIDIILKNSTAIDLKDLCICKRKLVWVLYCDMLCLNYNGSVIDACT 153
Query: 552 IAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
A AAL P+V TG ++H K P + PV+IS+A+F
Sbjct: 154 GALTAALKTLTLPEVNYNLETGVT-VVHPKKRK---PFVMKMLPVSISFAIF 201
>gi|326489127|dbj|BAK01547.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 235
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
+C +ES+ +D+ESLCVVA + VW++RVDL++L+ GNL+ +IAALAAL+ FR P+ T
Sbjct: 13 RCCRESRAVDMESLCVVAGKHVWSLRVDLHILDNGGNLIDAANIAALAALSTFRRPECTV 72
Query: 569 TGD---QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE 614
GD Q+ +H DP+P+TI H P+ +++A F G+ P + E
Sbjct: 73 GGDDGQQVTVHDPEVMDPLPLTIHHLPIAVTFAYFGDGNIMVIDPTYKE 121
>gi|146086838|ref|XP_001465658.1| putative exosome complex exonuclease RRP45 homolog [Leishmania
infantum JPCM5]
gi|398015399|ref|XP_003860889.1| exosome complex exonuclease RRP45 homolog, putative [Leishmania
donovani]
gi|134069757|emb|CAM68083.1| putative exosome complex exonuclease RRP45 homolog [Leishmania
infantum JPCM5]
gi|322499112|emb|CBZ34184.1| exosome complex exonuclease RRP45 homolog, putative [Leishmania
donovani]
Length = 363
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINA-----ELSPMASPQFETGRQTDTSVMINRFLEKCFK 512
A VSC++V P RP G ++A E P+ QF+ ++ S+ + R L
Sbjct: 66 ATVSCDLVEPSPYRPKHGFFEVHARQLLHERDPL--DQFKEIKRI--SMYLTRLLS---- 117
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S ++ E LCV+ +VW++ ++ ++N DGN+ A +AAL H R P++T G+
Sbjct: 118 -SSVLETEGLCVIPGRRVWSIDAEVIIVNNDGNVQDVAQWAVMAALQHVRRPELTIRGED 176
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAV 599
+I+H E+DP+P+ + H P++ ++AV
Sbjct: 177 VIVHPPHERDPVPLPLHHTPLSFTFAV 203
>gi|18146723|dbj|BAB82429.1| hypothetical protein [Arabidopsis thaliana]
Length = 328
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 47/268 (17%)
Query: 72 TSYWTDLFVRYFLFQTDSNI-DCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP 130
+++W +F YF+ +S DDLLFFVRK K+ + R+ + KL
Sbjct: 42 SNFWHGVFDVYFVRCMESRRRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLD 101
Query: 131 --IGD--PDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLK--------RHSQKV 178
+G+ +VDW ++ YLNMI H +T+T+AIC+ + K Q K + + V
Sbjct: 102 ELLGESLAEVDWRKSFYLNMIAHT-SFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTV 160
Query: 179 YASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG 234
YASPSR +D+K EVE YP +CF VD+F+ F +++ D + CV L + D A
Sbjct: 161 YASPSRVNFHLDSKKEVETTPAYPEICFAVDDFDSTFDAVVLTDKDHCYCVLLNSHDGAA 220
Query: 235 ----------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
K +F G + Y ++ Y+ N+F +S G
Sbjct: 221 FPSATVKDSSDSNTNADPRTVKDPKVTLFSGFVSYQMVREAYEGG---RNRFGSLLSLGH 277
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
+ ++ + M+GP G+G E+AV+
Sbjct: 278 ITGKADR----LYMRGPGGRGEVEVAVS 301
>gi|18406368|ref|NP_564743.1| protein CW7 [Arabidopsis thaliana]
gi|6520212|dbj|BAA87952.1| CW7 [Arabidopsis thaliana]
gi|28466965|gb|AAO44091.1| At1g59520 [Arabidopsis thaliana]
gi|110743903|dbj|BAE99786.1| CW7 [Arabidopsis thaliana]
gi|332195462|gb|AEE33583.1| protein CW7 [Arabidopsis thaliana]
Length = 388
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 47/268 (17%)
Query: 72 TSYWTDLFVRYFLFQTDSNI-DCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP 130
+++W +F YF+ +S DDLLFFVRK K+ + R+ + KL
Sbjct: 42 SNFWHGVFDVYFVRCMESRRRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLD 101
Query: 131 --IGD--PDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLK--------RHSQKV 178
+G+ +VDW ++ YLNMI H +T+T+AIC+ + K Q K + + V
Sbjct: 102 ELLGESLAEVDWRKSFYLNMIAHT-SFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTV 160
Query: 179 YASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG 234
YASPSR +D+K EVE YP +CF VD+F+ F +++ D + CV L + D A
Sbjct: 161 YASPSRVNFHLDSKKEVETTPAYPEICFAVDDFDSTFDAVVLTDKDHCYCVLLNSHDGAA 220
Query: 235 ----------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
K +F G + Y ++ Y+ N+F +S G
Sbjct: 221 FPSATVKDSSDSNTNADPRTVKDPKVTLFSGFVSYQMVREAYEGG---RNRFGSLLSLGH 277
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
+ ++ + M+GP G+G E+AV+
Sbjct: 278 ITGKADR----LYMRGPGGRGEVEVAVS 301
>gi|157107418|ref|XP_001649768.1| exosome complex exonuclease rrp43 (ribosomal RNA processing protein
43 [Aedes aegypti]
gi|108884054|gb|EAT48279.1| AAEL000659-PA [Aedes aegypti]
Length = 274
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N+ SI +G A+ + + V+ + + PK P+ G L N E+SP++SP++
Sbjct: 39 NFDSIKTADGSAIV--KIGNTTVVCGIKAELAPPKPVEPDTGYLVPNIEISPLSSPKYRP 96
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G ++ + + + L S C++L+ LC+ E+ VW + DL L++DG + IA
Sbjct: 97 GPPSEEAQVYSCSLADAILNSGCVNLKDLCITKEQLVWALYCDLVCLDHDGCIFDASVIA 156
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNG 602
+AAL R P V D + + IP+ + PVT S+AVF G
Sbjct: 157 LVAALHTLRLPPVKHNPDTDEREVDEDAERIPLKLNSIPVTTSFAVFGG 205
>gi|336477102|ref|YP_004616243.1| 3' exoribonuclease [Methanosalsum zhilinae DSM 4017]
gi|335930483|gb|AEH61024.1| 3' exoribonuclease [Methanosalsum zhilinae DSM 4017]
Length = 255
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++++A + P P+EG++ + EL+P+ASP FE G + +V ++R +++ +E
Sbjct: 51 TQLIAGIKLQTGTPFPDSPDEGVIITSMELNPIASPFFEPGPPNENAVEMSRVVDRGIRE 110
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S IDL+ LC+ E+VW V +D++VLN GN+L S+ A+AAL + P T
Sbjct: 111 SGTIDLKKLCITEGEEVWMVFIDIHVLNDGGNILDAASLGAIAALMTAKIPRETK----- 165
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNG 602
+ IP+ + PV +S G
Sbjct: 166 -----GYGEDIPVPVREMPVAVSLVDIEG 189
>gi|52550027|gb|AAU83876.1| 3'-5' exoribonuclease [uncultured archaeon GZfos34H10]
Length = 260
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 67/109 (61%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL V P + PN+G+L NAEL P+ASP+FE+G + S+ + R +++ + S+
Sbjct: 58 VLVGVKVEPGEPFSDTPNKGILMTNAELVPLASPEFESGPPNENSIELARVVDRGIRGSE 117
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
IDLE LC+ EKVW + +D++ L+ DGNL+ ++ A+ +L + P
Sbjct: 118 TIDLEKLCIEEGEKVWMLFIDIHTLDNDGNLVDAAALGAITSLLNVAIP 166
>gi|320101498|ref|YP_004177090.1| ribosomal RNA-processing protein RRP42 [Desulfurococcus mucosus DSM
2162]
gi|319753850|gb|ADV65608.1| ribosomal RNA-processing protein RRP42 [Desulfurococcus mucosus DSM
2162]
Length = 286
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P RPNEG+L ++AE P+ASP FE G + S+ I R +++ +E
Sbjct: 61 TQVIAGVKLELGEPFPDRPNEGVLQVHAEFVPLASPSFEPGPPDENSIEIARIIDRSLRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
K + L++L V + VW V D+ ++++ GN+ +A++ ALA R P + T
Sbjct: 121 PKAVKLDTLVVEPGKVVWVVFDDIYLVDHQGNITDASMMASMLALATARIPGLVKTETGY 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV---PGFTECIQLDTALALSQD 627
+ + + P+P+ L VT++ ++ G T+ P E LD+ L ++ D
Sbjct: 181 RVDNTKQTGPLPINTLV--VTVTMGIY-----GDTIVVDPSLEEEAVLDSFLTIAVD 230
>gi|383856603|ref|XP_003703797.1| PREDICTED: exosome complex component RRP43-like [Megachile
rotundata]
Length = 278
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N +SI+ + A++ + + V+ + + P+ P G + N ELSP+ SP+F
Sbjct: 36 SVNISSITHADSSAIF--KIGSTTVVCGIKAELTTPRTESPEYGYIVPNVELSPLCSPKF 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G +D + +I+ + S IDL+ LC+ + W + DL +NYDG+++ C
Sbjct: 94 RPGPPSDQAQIISNLINNILINSAAIDLKDLCICKGKLAWVLYCDLLCINYDGSVIDACV 153
Query: 552 IAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
A AAL P+V TG I +HS + I ++I PV+I++A+FN
Sbjct: 154 GALTAALNTLTLPEVVYNIQTG-SISVHSTKK---ISLSIKELPVSITFAIFN 202
>gi|239790360|dbj|BAH71746.1| ACYPI003501 [Acyrthosiphon pisum]
Length = 267
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 409 TQTFHFWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T T + +KR ++F +S N +I +G AV + + V+ + + +P
Sbjct: 11 TYTKEYLALNKRNDGRELMNFRDASLNLNTIHTADGSAVV--KIGNTAVVCGIKAELGVP 68
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
KA P+ G L +N EL + S + G D ++ + FL + K +DL+ LC+ +
Sbjct: 69 KAEAPDIGYLLVNIELPSLCSKKIRPGIPCDEAMQMTSFLNEVCNNCKILDLQQLCISVD 128
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMT 587
+ VW + D+ LNYDG++L C IA L+AL + P+V D+ + ++ IP+
Sbjct: 129 KLVWVLSCDIYCLNYDGSVLDACLIALLSALQTVKIPEVKY--DKETEETTVIENYIPLK 186
Query: 588 ILHYPVTISYAVFN 601
+ PV+ ++ VFN
Sbjct: 187 VNSLPVSSTFGVFN 200
>gi|375082087|ref|ZP_09729157.1| exosome complex RNA-binding protein Rrp42 [Thermococcus litoralis
DSM 5473]
gi|374743300|gb|EHR79668.1| exosome complex RNA-binding protein Rrp42 [Thermococcus litoralis
DSM 5473]
Length = 269
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 11/236 (4%)
Query: 410 QTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKA 469
+ KE KR D T++ E E + ++VL + + P
Sbjct: 11 HILNLLKEGKRIDGRGPEDLRPLTIETNV-IEKAEGSALVKLGNTQVLVGIKVDFGEPFP 69
Query: 470 TRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK 529
P G++ N E P+ASP FE G + ++ + R +++ +ES+ +DL L +V +
Sbjct: 70 DLPEMGVMTTNVEFVPLASPTFEPGPPDERAIELARVVDRGIRESQAVDLSKLVIVPGKL 129
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTIL 589
V + +D+++L++DGNLL I A+AAL + P V + + E +P+P+T
Sbjct: 130 VRVIFIDVHILDHDGNLLDASGIGAIAALLSTKIPKVEYDEESGEVKLLDEYEPLPVT-- 187
Query: 590 HYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQKLGVDSAYANLVNKTD 645
P+ +S+A G+ P F E +D L ++ D ++ Y + V K++
Sbjct: 188 KVPIPVSFAKI--GNALIVDPNFEEEQVMDGKLTITTD------ENGYISAVQKSE 235
>gi|386002837|ref|YP_005921136.1| Exosome complex exonuclease 2 [Methanosaeta harundinacea 6Ac]
gi|357210893|gb|AET65513.1| Exosome complex exonuclease 2 [Methanosaeta harundinacea 6Ac]
Length = 259
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL V P A PN+G++ NAEL P+ASP FE G + + + R +++ +E
Sbjct: 56 TRVLVGVKIQPGEPFADTPNKGVIITNAELVPLASPNFEPGPPNEVGIELARVVDRGVRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
S IDL SLC+ EKVW V +D++VL+ GNL+ S+ A+AAL
Sbjct: 116 SGAIDLPSLCIAPGEKVWIVFIDVHVLDDCGNLMDASSLGAIAAL 160
>gi|30696301|ref|NP_849827.1| protein CW7 [Arabidopsis thaliana]
gi|332195460|gb|AEE33581.1| protein CW7 [Arabidopsis thaliana]
Length = 319
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 127/272 (46%), Gaps = 47/272 (17%)
Query: 72 TSYWTDLFVRYFLFQTDSNI-DCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP 130
+++W +F YF+ +S DDLLFFVRK K+ + R+ + KL
Sbjct: 42 SNFWHGVFDVYFVRCMESRRRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLD 101
Query: 131 --IGD--PDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLK--------RHSQKV 178
+G+ +VDW ++ YLNMI H +T+T+AIC+ + K Q K + + V
Sbjct: 102 ELLGESLAEVDWRKSFYLNMIAHT-SFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTV 160
Query: 179 YASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG 234
YASPSR +D+K EVE YP +CF VD+F+ F +++ D + CV L + D A
Sbjct: 161 YASPSRVNFHLDSKKEVETTPAYPEICFAVDDFDSTFDAVVLTDKDHCYCVLLNSHDGAA 220
Query: 235 ----------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
K +F G + Y ++ Y+ N+F +S G
Sbjct: 221 FPSATVKDSSDSNTNADPRTVKDPKVTLFSGFVSYQMVREAYEGG---RNRFGSLLSLGH 277
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKG 304
+ ++ + M+GP G+G E+AV+ G
Sbjct: 278 ITGKADR----LYMRGPGGRGEVEVAVSGVVG 305
>gi|449310642|gb|AGE92548.1| exosome complex exonuclease RRP45-like protein, partial [Leishmania
braziliensis]
Length = 304
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 14/147 (9%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINA-----ELSPMASPQFETGRQTDTSVMINRFLEKCFK 512
A VSC++V P RP G ++A E P+ Q+ I+ +L + F
Sbjct: 7 ATVSCDLVEPSPYRPKHGFFEVHARQLLHERDPL--------DQSKEIKRISMYLTRLFT 58
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S ++ E LC++ +VW++ ++ ++N DGN+ A +AAL H R P++T GD
Sbjct: 59 GS-VLETEGLCIIPGRRVWSIDAEVIIMNNDGNVQDVGQWAVMAALQHVRRPELTIRGDD 117
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAV 599
+I+H E++P+P+ + H P++ ++AV
Sbjct: 118 VIVHPPHEREPVPLPLHHIPLSFTFAV 144
>gi|154337667|ref|XP_001565066.1| putative exosome complex exonuclease RRP45 homolog [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134062106|emb|CAM45222.1| putative exosome complex exonuclease RRP45 homolog [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310618|gb|AGE92536.1| exosome complex exonuclease RRP45-like protein [Leishmania
braziliensis]
Length = 363
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 14/147 (9%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINA-----ELSPMASPQFETGRQTDTSVMINRFLEKCFK 512
A VSC++V P RP G ++A E P+ Q+ I+ +L + F
Sbjct: 66 ATVSCDLVEPSPYRPKHGFFEVHARQLLHERDPL--------DQSKEIKRISMYLTRLFT 117
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S ++ E LC++ +VW++ ++ ++N DGN+ A +AAL H R P++T GD
Sbjct: 118 GS-VLETEGLCIIPGRRVWSIDAEVIIMNNDGNVQDVGQWAVMAALQHVRRPELTIRGDD 176
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYAV 599
+I+H E++P+P+ + H P++ ++AV
Sbjct: 177 VIVHPPHEREPVPLPLHHIPLSFTFAV 203
>gi|52548653|gb|AAU82502.1| tRNA nucleotidyltransferase [uncultured archaeon GZfos18B6]
Length = 238
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL V P PN+G+L NAEL P+ASP+FE+G + S+ + R +++ + S+
Sbjct: 36 VLVGVKVEPGAPFPDTPNKGVLMTNAELVPLASPEFESGPPGENSIELARVVDRGIRGSE 95
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
IDLE LC+ EKVW + +D++ L+ DGNL+ ++ A+ +L + P
Sbjct: 96 TIDLEKLCIEEGEKVWMIFIDIHTLDNDGNLVDAAALGAIMSLLNVTIP 144
>gi|193664372|ref|XP_001942983.1| PREDICTED: exosome complex exonuclease RRP43-like [Acyrthosiphon
pisum]
Length = 267
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 409 TQTFHFWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T T + +KR ++F +S N +I +G AV + + V+ + + +P
Sbjct: 11 TYTKEYLALNKRNDGRELMNFRDASLNLNTIHTADGSAVV--KIGNTAVVCGIKAELGVP 68
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
KA P+ G L +N EL + S + G D ++ + FL + K +DL+ LC+ +
Sbjct: 69 KAEAPDIGYLLVNIELPSLCSKKIRPGIPCDEAMQMTSFLNEVCNNCKILDLQQLCISVD 128
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMT 587
+ VW + D+ LNYDG++L C IA L+AL + P+V D+ + ++ IP+
Sbjct: 129 KLVWILSCDIYCLNYDGSVLDACLIALLSALQTVKIPEVKY--DKETEETTVIENYIPLK 186
Query: 588 ILHYPVTISYAVFN 601
+ PV+ ++ VFN
Sbjct: 187 VNSLPVSSTFGVFN 200
>gi|40217447|emb|CAE46380.1| 3'-5' exoribonuclease [uncultured archaeon]
gi|268323830|emb|CBH37418.1| 3'-5' exoribonuclase [uncultured archaeon]
Length = 260
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL V P PN+G+L NAEL P+ASP+FE+G + S+ + R +++ + S+
Sbjct: 58 VLVGVKVEPGEPFPDTPNKGILMTNAELVPLASPEFESGPPGENSIELARVVDRGIRGSE 117
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
IDLE LC+ EKVW + +D++ L+ DGNL+ ++ A+ +L + P
Sbjct: 118 TIDLEKLCIEEGEKVWMIFIDIHTLDNDGNLVDAAALGAIMSLLNVAIP 166
>gi|14601411|ref|NP_147948.1| exosome complex RNA-binding protein Rrp42 [Aeropyrum pernix K1]
gi|29337018|sp|Q9YC05.1|ECX2_AERPE RecName: Full=Probable exosome complex exonuclease 2
gi|5105129|dbj|BAA80443.1| exosome complex exonuclease Rrp42 homologue [Aeropyrum pernix K1]
Length = 276
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P PN+G+L ++AE P+ASP FE G + ++ + R +++ +E
Sbjct: 61 TQVIAGVKAGVGAPFKDTPNQGVLTVHAEFVPLASPVFEPGPPDENAIELARVVDRSLRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP--DVTSTGD 571
+DLESL + EKVW + VDL ++++DGNL +A +A L R P + + TG+
Sbjct: 121 VGAVDLESLVIRPGEKVWVLWVDLYIIDHDGNLFDASMLATMAVLLTARLPRYEESETGE 180
Query: 572 QII 574
II
Sbjct: 181 III 183
>gi|401422248|ref|XP_003875612.1| exosome complex exonuclease RRP45 homolog,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322491850|emb|CBZ27123.1| exosome complex exonuclease RRP45 homolog,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 363
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINA-ELSPMASPQFETGRQTDTSVMINRFLEKCFKESKC 516
A VSC++V P RP G ++A +L P + S+ + R L E+
Sbjct: 66 ATVSCDLVEPSPYRPKHGFFEVHARQLLHERDPLDQLKEIKRISMYLTRLLSGSVLET-- 123
Query: 517 IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIH 576
E LCV+ +VW++ ++ ++N DGN+ A +AAL H R P++T G+ +++H
Sbjct: 124 ---EGLCVIPGRRVWSIDAEVIIVNNDGNVQDVAQWAVMAALQHVRRPELTIRGEDVVVH 180
Query: 577 SAAEKDPIPMTILHYPVTISYAV 599
E+DP+P+ + H P++ ++AV
Sbjct: 181 PPHERDPVPLPLHHIPLSFTFAV 203
>gi|147919674|ref|YP_686582.1| exosome complex RNA-binding protein Rrp42 [Methanocella arvoryzae
MRE50]
gi|121687882|sp|Q0W2Y7.1|ECX2_UNCMA RecName: Full=Probable exosome complex exonuclease 2
gi|110621978|emb|CAJ37256.1| putative exosome complex exonuclease 2 [Methanocella arvoryzae
MRE50]
Length = 260
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 69/112 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S+V+ V P P+ G++ N EL P+ASP FE+G + ++ + R +++ +E
Sbjct: 56 SQVVVGVKIQPGEPFPDTPDSGVIITNLELVPLASPTFESGPPREDAIELARVVDRGVRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
S IDL LC+ + +KVW V +D++VL++DGNL+ S+ A+AAL + P+
Sbjct: 116 SGAIDLSKLCIESGQKVWMVFIDVHVLDHDGNLMDAASLGAIAALKATKIPN 167
>gi|357161008|ref|XP_003578948.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 2
[Brachypodium distachyon]
Length = 402
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 58/285 (20%)
Query: 74 YWTDLFVRYFLF-QTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVF-RKDSRKLP- 130
+W ++ +F+ + + + DDL+FFV + + FE F R+ + KL
Sbjct: 67 FWHEMLDLFFVRGRVSKSREEDDLVFFVNSMVLLKTH----GFEDPPPFFVRRWAPKLEK 122
Query: 131 ---IGDPDVDWEETVYLNMIIHQFDYTLTLAICT-------RTSPKHLQVLKRHSQKVYA 180
+ ++DWE + YLN++ H YT+T+AI + K L + + S+ VYA
Sbjct: 123 LINVNVSEIDWERSFYLNLVTHT-SYTVTVAIYSIGDLRNRAEKSKRLPPVYKVSKTVYA 181
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG-- 234
SPSR R+D + VE + YP +CF+VD+F++ F +++ D E CV L A D A
Sbjct: 182 SPSRVNFRLDRRKAVETVPAYPNICFSVDDFDDPFDAVVLSDPEHCYCVILNAHDGAAFP 241
Query: 235 ------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSF 270
K +F G + Y ++ YDA S KF +S
Sbjct: 242 EETKSKNDSSNIQCGANSGSNQENPPKRTLFSGYVSYQNVREAYDAGKS---KFGSFLSL 298
Query: 271 GIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
G N++ + + M+GP+G+G E+AV+ G ++ +PG
Sbjct: 299 G----QDNTKPDKLFMRGPEGRGEVEVAVS---GIADQSHEKDPG 336
>gi|68074995|ref|XP_679414.1| exosome complex exonuclease [Plasmodium berghei strain ANKA]
gi|56500153|emb|CAI00593.1| exosome complex exonuclease, putative [Plasmodium berghei]
Length = 511
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 5/150 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ +++ +V P +PNEG++ IN ++ + + + +D + I +E+ FK
Sbjct: 50 TKVVCKITSEIVKPYDKKPNEGIIKINLDVESFNTYN-DISKISDECLEIKNLIERIFKA 108
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP--DVTSTGD 571
S ++ ESLC++ +KVW + +++ V+ DGNL C ++A +AL HFR+ D+ +TG+
Sbjct: 109 SNILNFESLCIIPYKKVWCLLINITVIENDGNLYDSCYLSAYSALLHFRNSSVDIDNTGN 168
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
II E + +++ + P+ ++A FN
Sbjct: 169 VII--DEEEVNYTSLSVHNSPILTTFAYFN 196
>gi|145476653|ref|XP_001424349.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391413|emb|CAK56951.1| unnamed protein product [Paramecium tetraurelia]
Length = 299
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V A S ++ P RP+EG L + +L + + + I +++EK K
Sbjct: 46 TRVFATTSASITTPNPIRPSEGFLKFHLDLQVLRDTGY-MHNPIKLGMEIEKYIEKVIKG 104
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SK +D ESLC+++ + VW++ V++ ++N DGNLL + + +L HFR P V+ + +
Sbjct: 105 SKALDTESLCILSGKNVWSIDVNVALINNDGNLLDAMYLCCIFSLQHFRRPQVSVSLQGV 164
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
+ EK +P++I H P++++YA+
Sbjct: 165 KVE--VEKRLVPLSIHHIPLSLTYAIL 189
>gi|401403929|ref|XP_003881608.1| GF22565, related [Neospora caninum Liverpool]
gi|325116021|emb|CBZ51575.1| GF22565, related [Neospora caninum Liverpool]
Length = 552
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%)
Query: 503 INRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFR 562
+ R L + K+S +D E+LC+ + + W+VRV + V+ DGNL +AAL L HF+
Sbjct: 122 LERMLRRLLKDSGVVDTEALCIQSGKWAWHVRVAVTVVEDDGNLRDTALLAALCGLMHFK 181
Query: 563 HPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
VT GDQ + H AA+++P+P+ I H P+ +S+A
Sbjct: 182 KEAVTFDGDQAVFHRAADREPLPLCIHHLPILVSFAFL 219
>gi|307594959|ref|YP_003901276.1| 3' exoribonuclease [Vulcanisaeta distributa DSM 14429]
gi|307550160|gb|ADN50225.1| 3' exoribonuclease [Vulcanisaeta distributa DSM 14429]
Length = 283
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P P+EG L +N E++P ASP E G + ++ I R +++ +
Sbjct: 61 TKVMAGVKVEVGKPFEDTPDEGALIVNLEIAPTASPDIEPGPPDENAIEIARVVDRAIRH 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT--STGD 571
S +D +SL +V + W + VD+ VLN+DGNL+ +IAA+AAL + P V G+
Sbjct: 121 SGFLDFKSLSIVTGKHAWFLWVDIYVLNHDGNLVDASTIAAVAALMNTALPKVELDPAGN 180
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISY 597
+ I +A + P+ + P+TI+Y
Sbjct: 181 ILKIDRSA-RSPLRLNTDKLPLTITY 205
>gi|261328578|emb|CBH11556.1| ribosomal RNA processing protein 45 [Trypanosoma brucei gambiense
DAL972]
Length = 363
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT---DTSVMIN--RFLE 508
S V A ++ +V P RP GLL + + T R + D S N FLE
Sbjct: 63 SVVTAAIATALVEPTPQRPKHGLLHFSVR-------RLHTERDSPAADGSTQKNLVAFLE 115
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
+ + ID LCV+ +KVW++ VD+ ++N +GN A +A L H R P++T
Sbjct: 116 RLVRTGGVIDTAGLCVLPGQKVWSLTVDVTIMNDEGNCNDAAVWAVIALLMHHRRPELTV 175
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
G +I+H E++P+P+++ H P+ ++A+ +E
Sbjct: 176 RGSSVIVHPPHEREPVPLSVQHTPLPFTFAITMAPTE 212
>gi|72389791|ref|XP_845190.1| ribosomal RNA processing protein 45 [Trypanosoma brucei TREU927]
gi|62360049|gb|AAX80471.1| ribosomal RNA processing protein 45 [Trypanosoma brucei]
gi|70801725|gb|AAZ11631.1| ribosomal RNA processing protein 45 [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 363
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT---DTSVMIN--RFLE 508
S V A ++ +V P RP GLL + + T R + D S N FLE
Sbjct: 63 SVVTAAIATALVEPTPQRPKHGLLHFSVR-------RLHTERDSPAADGSTQKNLVAFLE 115
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
+ + ID LCV+ +KVW++ VD+ ++N +GN A +A L H R P++T
Sbjct: 116 RLVRTGGVIDTAGLCVLPGQKVWSLTVDVTIMNDEGNCNDAAVWAVIALLMHHRRPELTV 175
Query: 569 TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
G +I+H E++P+P+++ H P+ ++A+ +E
Sbjct: 176 RGSSVIVHPPHEREPVPLSVQHTPLPFTFAITMAPTE 212
>gi|357161005|ref|XP_003578947.1| PREDICTED: uncharacterized protein KIAA0930 homolog isoform 1
[Brachypodium distachyon]
Length = 398
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 61/285 (21%)
Query: 74 YWTDLFVRYFLF-QTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVF-RKDSRKLP- 130
+W ++ +F+ + + + DDL+FFV +KT FE F R+ + KL
Sbjct: 66 FWHEMLDLFFVRGRVSKSREEDDLVFFVNS--MKTHG-----FEDPPPFFVRRWAPKLEK 118
Query: 131 ---IGDPDVDWEETVYLNMIIHQFDYTLTLAICT-------RTSPKHLQVLKRHSQKVYA 180
+ ++DWE + YLN++ H YT+T+AI + K L + + S+ VYA
Sbjct: 119 LINVNVSEIDWERSFYLNLVTHT-SYTVTVAIYSIGDLRNRAEKSKRLPPVYKVSKTVYA 177
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG-- 234
SPSR R+D + VE + YP +CF+VD+F++ F +++ D E CV L A D A
Sbjct: 178 SPSRVNFRLDRRKAVETVPAYPNICFSVDDFDDPFDAVVLSDPEHCYCVILNAHDGAAFP 237
Query: 235 ------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSF 270
K +F G + Y ++ YDA S KF +S
Sbjct: 238 EETKSKNDSSNIQCGANSGSNQENPPKRTLFSGYVSYQNVREAYDAGKS---KFGSFLSL 294
Query: 271 GIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
G N++ + + M+GP+G+G E+AV+ G ++ +PG
Sbjct: 295 G----QDNTKPDKLFMRGPEGRGEVEVAVS---GIADQSHEKDPG 332
>gi|409050427|gb|EKM59904.1| hypothetical protein PHACADRAFT_181840 [Phanerochaete carnosa
HHB-10118-sp]
Length = 287
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 8/211 (3%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ + +W DV S N SIS +G A+ + + V+ V + P+ P +G
Sbjct: 44 DGREPTEWRDV----SVNVGSISTADGSALV--RLGDTTVVCGVKAEIAEPELDSPEDGF 97
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L N +L + SP+F G +D + +++ L + + I SLC+ + + VW + VD
Sbjct: 98 LVPNLDLPAICSPKFRPGPPSDEAQVLSDRLNETLVSTGVISTRSLCIESRKAVWVLYVD 157
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NYDGN L +A +AAL + R P T D + K+ IP+ I +P+++S
Sbjct: 158 ATCINYDGNALDATLVAMIAALQNTRLPKATFDEDTGRVL-CTRKEMIPLQISRFPLSMS 216
Query: 597 YAVFNGGSEGSTVPGFTECIQLDTALALSQD 627
+ VF+G + F E + LDT ++ D
Sbjct: 217 FGVFDGTHILTDPTSFEEPL-LDTTFTVTVD 246
>gi|221057472|ref|XP_002261244.1| exosome complex exonuclease [Plasmodium knowlesi strain H]
gi|194247249|emb|CAQ40649.1| exosome complex exonuclease, putative [Plasmodium knowlesi strain
H]
Length = 514
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 83/148 (56%), Gaps = 1/148 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ +++ +V P RPNEG++ +N ++ + + + +D + I +E+ K
Sbjct: 50 TKVICKITSEIVKPFDKRPNEGIIKVNLDIDSFTNVN-DNSQISDECLEIKNLIERILKS 108
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S ++ ESLC++ +KVW + V++ V+ DGNL C ++A + L H+R+ +VT
Sbjct: 109 SNLLNFESLCIIPHKKVWCLLVNIIVVENDGNLYDSCFLSAYSGLVHYRNNEVTVDSIGN 168
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
I E + P++I + P+ ++A FN
Sbjct: 169 IFIEQGETNYTPLSIHNTPILTTFAYFN 196
>gi|157869515|ref|XP_001683309.1| putative exosome complex exonuclease RRP45 [Leishmania major strain
Friedlin]
gi|68224193|emb|CAJ04881.1| putative exosome complex exonuclease RRP45 [Leishmania major strain
Friedlin]
Length = 363
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 458 AQVSCNMVIPKATRPNEGLLFINA-ELSPMASPQFETGRQTDTSVMINRFLEKCFKESKC 516
A +SC++V P RP G ++A +L P ++ S+ + R L E+
Sbjct: 66 ATISCDLVEPSPYRPKHGFFEVHARQLLNERDPLDQSKEIKRISMYLTRLLSGSVLET-- 123
Query: 517 IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIH 576
ESLCV+ +VW++ ++ ++N DGN A + AL H R P++T G+ +I+H
Sbjct: 124 ---ESLCVIPGRRVWSIDAEVIIVNNDGNAQDVAQWAVMTALQHVRRPELTIRGEDVIVH 180
Query: 577 SAAEKDPIPMTILHYPVTISYAV 599
E+DP+P+ + H P++ ++AV
Sbjct: 181 PPHERDPVPLPLHHIPLSFTFAV 203
>gi|156937004|ref|YP_001434800.1| exosome complex RNA-binding protein Rrp42 [Ignicoccus hospitalis
KIN4/I]
gi|156565988|gb|ABU81393.1| ribosomal RNA-processing protein RRP42 [Ignicoccus hospitalis
KIN4/I]
Length = 276
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 77/134 (57%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLA V + P P+ G+L +NAEL P+AS +FE G + ++ + R +++ +E
Sbjct: 61 TKVLAGVKVEVGKPFKDVPDAGVLNVNAELLPLASSEFEPGPPDENAIELARVIDRALRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
IDL+ L ++ EKV V +D+ VL++DGNL +A++AAL R+P+ D
Sbjct: 121 PGVIDLKELVLIPGEKVLVVWLDVYVLDHDGNLFDASMLASMAALLDTRYPEYVVREDGS 180
Query: 574 IIHSAAEKDPIPMT 587
+ A K P+P+
Sbjct: 181 VEVDEANKRPLPIA 194
>gi|116317816|emb|CAH65852.1| OSIGBa0140C02.4 [Oryza sativa Indica Group]
Length = 405
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 53/286 (18%)
Query: 74 YWTDLFVRYFLF-QTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVF-RKDSRKLP- 130
+W ++ +F+ + + DDL+FFV + R+ E F R+ + KL
Sbjct: 63 FWHEILDLFFVHGRVSKGREEDDLVFFVNNMKL-NGYRSSDNMENPPPFFVRRWAPKLEK 121
Query: 131 ---IGDPDVDWEETVYLNMIIHQFDYTLTLAICT-------RTSPKHLQVLKRHSQKVYA 180
I DV+WE + YLN+I H Y++T+AIC+ K L + + ++ VYA
Sbjct: 122 ITNINLADVNWERSFYLNLIAHT-SYSVTVAICSIMDLCNRAEKSKPLSPVYKVTKTVYA 180
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILV-RDGEMV-CVELVASDRAG- 234
SPSR +D + VE + YP +CF++D+F++ F ++V D E CV L A D A
Sbjct: 181 SPSRVNFHLDRRKAVETVPAYPNICFSIDDFDDTFDAVVVLSDPEHCYCVILNAHDGAAF 240
Query: 235 -------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMS 269
K +F G + Y ++ YDA S KF S
Sbjct: 241 PENTESKNPSSNVLSGVNTGSKQEKPPKRTLFSGYVSYQNVREAYDAGRS---KFESLFS 297
Query: 270 FGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
G + ++++ + M+GP+G+G E+AV+ E +PG
Sbjct: 298 LG----HDRTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPG 339
>gi|288930698|ref|YP_003434758.1| 3' exoribonuclease [Ferroglobus placidus DSM 10642]
gi|288892946|gb|ADC64483.1| 3' exoribonuclease [Ferroglobus placidus DSM 10642]
Length = 259
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V P PN+G++ NAEL P+ASP FE G + ++ + R +++ +E
Sbjct: 56 TQVLVGVKMQPGEPFPDAPNKGIIITNAELVPLASPTFEPGPPDENAIELARVVDRGIRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
S+ +DLE LC+ EKVW + +D+ L+ DGNLL ++ A+AAL + P
Sbjct: 116 SEAVDLEKLCIEEGEKVWLIFIDIWALDDDGNLLDASALGAIAALLNTTVP 166
>gi|167043480|gb|ABZ08177.1| putative 3' exoribonuclease family, domain 1 [uncultured marine
microorganism HF4000_APKG2H5]
Length = 264
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 64/103 (62%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V A V +++P RPN+G L +AE+ P+A P +E G + S+ + R +++ +ES
Sbjct: 58 VYAGVKLQIMVPYPDRPNQGGLMCSAEVRPVAGPNWEPGPPSPESIELGRVVDRGIRESG 117
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
CID++ LC++ EK W V +DL ++ DGNL ++A +AA+
Sbjct: 118 CIDVDGLCLIPGEKAWQVILDLFAISDDGNLFDAFALAGIAAM 160
>gi|222636755|gb|EEE66887.1| hypothetical protein OsJ_23709 [Oryza sativa Japonica Group]
Length = 411
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 42/219 (19%)
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICT-------RTSPKHLQVLKRHSQKVYASPS 183
I VDWE + YLN+I H YT+T+AIC+ K L + + ++ VYASPS
Sbjct: 135 INSAGVDWERSFYLNLIAHT-SYTVTVAICSVRDLCSRAEKSKPLSPVYKVTKTVYASPS 193
Query: 184 RR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG----- 234
R +D + VE + YP +CF+VD+F++ F +++ D E CV L A D A
Sbjct: 194 RVNFHLDRRKAVETVPAYPNICFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFPEDT 253
Query: 235 ------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNN 276
K +F G + Y ++ Y+A S +F +S G +
Sbjct: 254 ESKNASSNLLNTGSNQEKPPKRTLFSGYVSYQNVREAYNAGRS---QFGSLLSLG----H 306
Query: 277 SNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
++++ + M+GP+G+G E+AV+ E +PG
Sbjct: 307 DQTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPG 345
>gi|13541139|ref|NP_110827.1| exosome complex RNA-binding protein Rrp42 [Thermoplasma volcanium
GSS1]
gi|29336898|sp|Q97BZ4.1|ECX2_THEVO RecName: Full=Probable exosome complex exonuclease 2
gi|14324526|dbj|BAB59453.1| nucleotidyltransferase [Thermoplasma volcanium GSS1]
Length = 260
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V P P++G+L N EL P+A P FE G D ++ ++R +++ +E
Sbjct: 59 TRVVAGVKIEAGEPFPDTPDQGVLTTNVELLPIAFPSFEAGPPNDLAIEVSRVVDRGIRE 118
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
SK I + L + +KVW V +D+NVL+YDGNL+ C+IAA++AL + P
Sbjct: 119 SKMISPDKLVIEQGKKVWIVFLDINVLDYDGNLIDACTIAAVSALRNAIVP 169
>gi|385806381|ref|YP_005842779.1| exosome complex RNA-binding protein Rrp42 [Fervidicoccus fontis
Kam940]
gi|383796244|gb|AFH43327.1| exosome complex RNA-binding protein Rrp42 [Fervidicoccus fontis
Kam940]
Length = 274
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL V P PNEG+L +NAE P+ASP FE G + + + R +++ ++ESK
Sbjct: 63 VLVGVKVEPGAPYPDNPNEGVLMVNAEFVPLASPAFEPGPPDENAYELARIIDRSYRESK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
I L L +V +KV V D+ VLN+ GNL+ +IA+L AL + R P
Sbjct: 123 AIGLGELALVPGQKVLVVWNDIYVLNHSGNLIDASAIASLVALMNTRIP 171
>gi|305663899|ref|YP_003860187.1| 3' exoribonuclease [Ignisphaera aggregans DSM 17230]
gi|304378468|gb|ADM28307.1| 3' exoribonuclease [Ignisphaera aggregans DSM 17230]
Length = 286
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 68/106 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++LA V + P PNEG+L +NAE P ASP FE G + ++ + R +++ +E
Sbjct: 60 TQILAGVKLEVGQPFPDSPNEGILIVNAEYLPAASPTFEPGPPDENAIELARVIDRGLRE 119
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALA 559
+K I L+ L +V ++VW V +D+ +L++DGNL+ ++A++ ALA
Sbjct: 120 AKVIALDKLVIVPGKRVWIVWLDIYILDHDGNLIDASAMASMLALA 165
>gi|145349570|ref|XP_001419203.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579434|gb|ABO97496.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 257
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 15/148 (10%)
Query: 473 NEGLLFINAELSPMASPQF----ETGRQTDTSVM-INRFLEKCFKESKCIDLESLCVVAE 527
+EG+L ++ E S A F R+T + LE+ K+++ +D+ESLCV+A
Sbjct: 37 SEGVLRVDCEFSSGACEGFAREGRANRETRQRAKDLGALLERGLKDARAVDVESLCVLAG 96
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPI 584
++VW V + +L +DGNL G S+AA +L +R P+ +TG + +HSA ++ I
Sbjct: 97 KRVWVVTCAVTILAHDGNLAGAASLAACGSLMTYRRPECAVDPNTG-TVTVHSADAREAI 155
Query: 585 PMTILHYPVTISYAVFNGGSEGSTVPGF 612
P+ + H+P+ +Y F+ VPG
Sbjct: 156 PLNMHHFPIASTYCFFD------EVPGL 177
>gi|19551098|gb|AAL91603.1|AC099400_9 Hypothetical protein [Oryza sativa Japonica Group]
gi|110288519|gb|ABB46577.2| hypothetical protein LOC_Os10g01380 [Oryza sativa Japonica Group]
Length = 369
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 42/219 (19%)
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICT-------RTSPKHLQVLKRHSQKVYASPS 183
I VDWE + YLN+I H YT+T+AIC+ K L + + ++ VYASPS
Sbjct: 92 INSAGVDWERSFYLNLIAHT-SYTVTVAICSVRDLCSRAEKSKPLSPVYKVTKTVYASPS 150
Query: 184 RR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG----- 234
R +D + VE + YP +CF+VD+F++ F +++ D E CV L A D A
Sbjct: 151 RVNFHLDRRKAVETVPAYPNICFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFPEDT 210
Query: 235 ------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNN 276
K +F G + Y ++ Y+A S +F +S G +
Sbjct: 211 ESKNASSNLLNTGSNQEKPPKRTLFSGYVSYQNVREAYNAGRS---QFGSLLSLG----H 263
Query: 277 SNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
++++ + M+GP+G+G E+AV+ E +PG
Sbjct: 264 DQTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPG 302
>gi|325969193|ref|YP_004245385.1| 3' exoribonuclease [Vulcanisaeta moutnovskia 768-28]
gi|323708396|gb|ADY01883.1| 3' exoribonuclease [Vulcanisaeta moutnovskia 768-28]
Length = 283
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P P+EG L +N E++P ASP E G + ++ I R +++ +
Sbjct: 61 TKVMAGVKVEVGKPFEDTPDEGALIVNLEIAPAASPDIEPGPPDENAIEIARVVDRAIRH 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV-TSTGDQ 572
S ++ +SL +V W + VD+ VLN+DGNL+ +IAA+ AL + P V
Sbjct: 121 SGFLNFKSLSIVTGRHAWFLWVDIYVLNHDGNLVDASTIAAITALMNTALPKVELDPAGN 180
Query: 573 IIIHSAAEKDPIPMTILHYPVTISYA 598
I+ + K P+ + + P+TI++A
Sbjct: 181 ILRIDRSNKSPLALNVDKLPLTITHA 206
>gi|115471379|ref|NP_001059288.1| Os07g0248800 [Oryza sativa Japonica Group]
gi|33146977|dbj|BAC80050.1| unknown protein [Oryza sativa Japonica Group]
gi|50508481|dbj|BAD30658.1| unknown protein [Oryza sativa Japonica Group]
gi|113610824|dbj|BAF21202.1| Os07g0248800 [Oryza sativa Japonica Group]
Length = 411
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 42/219 (19%)
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRT-------SPKHLQVLKRHSQKVYASPS 183
I VDWE + YLN+I H YT+T+AIC+ K L + + ++ VYASPS
Sbjct: 135 INSAGVDWERSFYLNLIAHT-SYTVTVAICSVRDLRSRVEKSKPLSPVYKVTKTVYASPS 193
Query: 184 RR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG----- 234
R +D + VE + YP +CF+VD+F++ F +++ D E CV L A D A
Sbjct: 194 RVNFHLDRRKAVETVPAYPNICFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFPEDT 253
Query: 235 ------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNN 276
K +F G + Y ++ Y+A S +F +S G +
Sbjct: 254 ESKNASSNLLNTGSNQEKPPKRTLFSGYVSYQNVREAYNAGRS---QFGSLLSLG----H 306
Query: 277 SNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
++++ + M+GP+G+G E+AV+ E +PG
Sbjct: 307 DQTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPG 345
>gi|218199374|gb|EEC81801.1| hypothetical protein OsI_25521 [Oryza sativa Indica Group]
Length = 412
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 42/219 (19%)
Query: 131 IGDPDVDWEETVYLNMIIHQFDYTLTLAICTRT-------SPKHLQVLKRHSQKVYASPS 183
I VDWE + YLN+I H YT+T+AIC+ K L + + ++ VYASPS
Sbjct: 136 INSAGVDWERSFYLNLIAHT-SYTVTVAICSVRDLRSRVEKSKPLSPVYKVTKTVYASPS 194
Query: 184 RR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG----- 234
R +D + VE + YP +CF+VD+F++ F +++ D E CV L A D A
Sbjct: 195 RVNFHLDRRKAVETVPAYPNICFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFPEDT 254
Query: 235 ------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNN 276
K +F G + Y ++ Y+A S +F +S G +
Sbjct: 255 ESKNASSNLLNTGSNQEKPPKRTLFSGYVSYQNVREAYNAGRS---QFGSLLSLG----H 307
Query: 277 SNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
++++ + M+GP+G+G E+AV+ E +PG
Sbjct: 308 DQTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPG 346
>gi|16082607|ref|NP_394748.1| exosome complex RNA-binding protein Rrp42 [Thermoplasma acidophilum
DSM 1728]
gi|29336948|sp|Q9HIP1.2|ECX2_THEAC RecName: Full=Probable exosome complex exonuclease 2
Length = 260
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 433 ENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFE 492
EN+ I NG A + + V+A V P P++G+L N EL P+A P FE
Sbjct: 42 ENY--IPRANGSAYVA--LGNTRVVAGVKIEAGEPFPDTPDQGVLTTNVELLPIAFPSFE 97
Query: 493 TGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSI 552
G D ++ ++R +++ +ESK I E L + +KVW V +D+NVL+YDGNL+ +I
Sbjct: 98 AGPPNDLAIEVSRVVDRGIRESKMISPEKLVIEQGKKVWIVFLDINVLDYDGNLIDASTI 157
Query: 553 AALAALAHFRHPDVTSTGD 571
AA+AAL + P G+
Sbjct: 158 AAVAALRNAVVPASKEGGE 176
>gi|330508838|ref|YP_004385266.1| exosome complex exonuclease 2 [Methanosaeta concilii GP6]
gi|328929646|gb|AEB69448.1| exosome complex exonuclease 2 [Methanosaeta concilii GP6]
Length = 258
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S+VL V P PN G++ NAEL P+ASP FE G + + + R +++ +E
Sbjct: 55 SQVLVGVKMQPGEPFQDSPNRGVIITNAELVPLASPSFEPGPPNEVGIELARLVDRGVRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
SK +DLE+LC+ +KVW V +D+++L+ GN+L S+ A++AL + P
Sbjct: 115 SKAVDLEALCIEPGKKVWIVFIDVHILDDCGNILDAASLGAISALLCTKVP 165
>gi|10640638|emb|CAC12416.1| rRNA processing protein (yeast RRP45) related protein [Thermoplasma
acidophilum]
Length = 240
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 433 ENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFE 492
EN+ I NG A + + V+A V P P++G+L N EL P+A P FE
Sbjct: 22 ENY--IPRANGSAYVA--LGNTRVVAGVKIEAGEPFPDTPDQGVLTTNVELLPIAFPSFE 77
Query: 493 TGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSI 552
G D ++ ++R +++ +ESK I E L + +KVW V +D+NVL+YDGNL+ +I
Sbjct: 78 AGPPNDLAIEVSRVVDRGIRESKMISPEKLVIEQGKKVWIVFLDINVLDYDGNLIDASTI 137
Query: 553 AALAALAHFRHPDVTSTGD 571
AA+AAL + P G+
Sbjct: 138 AAVAALRNAVVPASKEGGE 156
>gi|115457170|ref|NP_001052185.1| Os04g0183100 [Oryza sativa Japonica Group]
gi|38346900|emb|CAE04395.2| OSJNBb0006L01.7 [Oryza sativa Japonica Group]
gi|113563756|dbj|BAF14099.1| Os04g0183100 [Oryza sativa Japonica Group]
Length = 405
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 53/286 (18%)
Query: 74 YWTDLFVRYFLF-QTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVF-RKDSRKLP- 130
+W ++ +F+ + + DDL+FFV + R+ E F R+ + KL
Sbjct: 63 FWHEILDLFFVHGRVSKGREEDDLVFFVNNMKL-NGYRSSDNMENPPPFFVRRWAPKLEK 121
Query: 131 ---IGDPDVDWEETVYLNMIIHQFDYTLTLAICT-------RTSPKHLQVLKRHSQKVYA 180
I DV+WE + YLN+I H Y++T+AIC+ K L + + ++ VYA
Sbjct: 122 ITNINLADVNWERSFYLNLIAHT-SYSVTVAICSIMDLCNRAEKSKPLSPVYKVTKTVYA 180
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDI-LVRDGEMV-CVELVASDRAG- 234
SPSR +D + VE + YP +CF++D+F++ F + ++ D E CV L A D A
Sbjct: 181 SPSRVNFHLDRRKAVETVPAYPNICFSIDDFDDTFDAVQVLSDPEHCYCVILNAHDGAAF 240
Query: 235 -------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMS 269
K +F G + Y ++ YDA S KF S
Sbjct: 241 PENTESKNPSSNVLSGVNTGSKQEKPPKRTLFSGYVSYQNVREAYDAGRS---KFESLFS 297
Query: 270 FGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
G + ++++ + M+GP+G+G E+AV+ E +PG
Sbjct: 298 LG----HDRTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPG 339
>gi|159040755|ref|YP_001540007.1| exosome complex RNA-binding protein Rrp42 [Caldivirga
maquilingensis IC-167]
gi|157919590|gb|ABW01017.1| 3' exoribonuclease [Caldivirga maquilingensis IC-167]
Length = 279
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A + + P PNEG L +N E P+A+P FE G + ++ I R +++ +
Sbjct: 59 TKVIAGIKFELGKPFEDTPNEGNLIVNLETPPLAAPTFEPGPPDENAIEIARIIDRALRH 118
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S I L L ++ + V+++ VD+ VLN+DGNL+ +AA++A+A+ + P G+ +
Sbjct: 119 SNYIPLRDLVIIPGKSVYSMWVDIYVLNHDGNLIDSSMLAAVSAIANAQVPRAIIDGENV 178
Query: 574 IIHSAAEKDPIPMTILHYPVTISY 597
+ + K P+ + + P+T++Y
Sbjct: 179 KLDKST-KIPLNINPQNMPLTVTY 201
>gi|296203741|ref|XP_002749024.1| PREDICTED: uncharacterized protein LOC100407072 [Callithrix
jacchus]
Length = 276
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT G+ + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINGETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|383319304|ref|YP_005380145.1| RNase PH-related exoribonuclease [Methanocella conradii HZ254]
gi|379320674|gb|AFC99626.1| RNase PH-related exoribonuclease [Methanocella conradii HZ254]
Length = 259
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S+V+ + P P+ G++ N EL P+ASP FE G + ++ + R +++ +E
Sbjct: 56 SQVVVGIKVQPGEPFPDAPDSGVIITNLELVPLASPTFEAGPPREDAIELARVVDRGVRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
S IDL LC+ + +KVW V +D++VL++DGNL+ S+ A+AAL + P+
Sbjct: 116 SGAIDLSKLCIESGQKVWMVFIDVHVLDHDGNLMDASSLGAIAALMNTVIPN 167
>gi|14250910|emb|CAC39260.1| Rrp45p homologue [Trypanosoma brucei]
Length = 363
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAEL--SPMASPQFETGRQTDTSVMINRFLEKCF 511
S V A ++ +V P RP GLL + + SP + Q + + FLE+
Sbjct: 63 SVVTAAIATALVEPTPQRPKHGLLHFSVRRLHTEKDSPAADGSTQKN----LVAFLERLV 118
Query: 512 KESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
+ ID LCV+ +KVW++ V++ ++N +GN A +A L H R P++T G
Sbjct: 119 RTGGVIDTAGLCVLPGQKVWSLTVNVTIMNDEGNCNDAAVWAVIALLMHHRRPELTVRGS 178
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSE 605
+I+H E++P+P+++ H P+ ++A+ +E
Sbjct: 179 SVIVHPPHEREPVPLSVQHTPLPFTFAITMAPTE 212
>gi|30696304|ref|NP_849828.1| protein CW7 [Arabidopsis thaliana]
gi|332195461|gb|AEE33582.1| protein CW7 [Arabidopsis thaliana]
gi|343455573|gb|AEM36359.1| At1g59520 [Arabidopsis thaliana]
Length = 388
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 47/268 (17%)
Query: 72 TSYWTDLFVRYFLFQTDSNI-DCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP 130
+++W +F YF+ +S DDLLFFVRK K+ + R+ + KL
Sbjct: 42 SNFWHGVFDVYFVRCMESRRRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLD 101
Query: 131 --IGD--PDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLK--------RHSQKV 178
+G+ +VDW ++ YLNMI H +T+T+AIC+ + K Q K + + V
Sbjct: 102 ELLGESLAEVDWRKSFYLNMIAHT-SFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTV 160
Query: 179 YASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG 234
YASPSR +D+K +E YP +CF VD+F+ F +++ D + CV L + D A
Sbjct: 161 YASPSRVNFHLDSKKAMETTPAYPEICFAVDDFDSTFDAVVLTDKDHCYCVLLNSHDGAA 220
Query: 235 ----------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGI 272
K +F G + Y ++ Y+ N+F +S G
Sbjct: 221 FPSATVKDSSDSNTNADPRTVKDPKVTLFSGFVSYQMVREAYEGG---RNRFGSLLSLGH 277
Query: 273 FSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
+ ++ + M+GP G+G E+AV+
Sbjct: 278 ITGKADR----LYMRGPGGRGEVEVAVS 301
>gi|119719493|ref|YP_919988.1| exosome complex RNA-binding protein Rrp42 [Thermofilum pendens Hrk
5]
gi|119524613|gb|ABL77985.1| ribosomal RNA-processing protein RRP42 [Thermofilum pendens Hrk 5]
Length = 272
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P PNEG+ +NAELSP+ASP FE G + + + R +++ F+
Sbjct: 58 TQVIAGVKLAIGTPFPDAPNEGVQIVNAELSPVASPFFEPGPPGEEDIELARVVDRGFRS 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+K +DL L ++ K W + +D+ L++DGNL+ +AAL AL + P + ++I
Sbjct: 118 AKVVDLAKLSIIPSAKCWTLYIDIYPLDHDGNLVDAAGLAALLALLDTKLPRTSVQENKI 177
Query: 574 IIHSAAEKDPIPMTILHYPVTIS 596
+ EKDP+P+ L VT++
Sbjct: 178 AVLD--EKDPLPINTLVVYVTVA 198
>gi|401888332|gb|EJT52292.1| exosome complex exonuclease rrp45 [Trichosporon asahii var. asahii
CBS 2479]
Length = 259
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 77/160 (48%), Gaps = 35/160 (21%)
Query: 466 IPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVV 525
+P RP E L AEL + +T D VMI R LEK + ++ +D E+LC+V
Sbjct: 29 LPLEQRPFE--LSFGAELGSVECRMGKTAASED-EVMITRLLEKSIRRTEAVDREALCIV 85
Query: 526 AEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII---------- 575
A EKV + GNLL C SIAA+ AL HFR P+V GD++I+
Sbjct: 86 AGEKVSS-------RGEAGNLLDCASIAAMTALKHFRKPEVEVHGDEVIVVRNLNFLLAS 138
Query: 576 ---------------HSAAEKDPIPMTILHYPVTISYAVF 600
HS E+ P+P+ I H P+ +++A F
Sbjct: 139 IPPRASHFGFSADMQHSPDERAPLPLAIHHNPLCLTFAYF 178
>gi|424811893|ref|ZP_18237133.1| RNase PH-related exoribonuclease [Candidatus Nanosalinarum sp.
J07AB56]
gi|339756115|gb|EGQ39698.1| RNase PH-related exoribonuclease [Candidatus Nanosalinarum sp.
J07AB56]
Length = 260
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 414 FWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPN 473
E +R ++ E T E E + ++++ + ++ P RP+
Sbjct: 11 LADEGERLDGRQPHEYREIELETGYINETAEGSAYVSIGDTQLVVGLKVDVEEPYDDRPD 70
Query: 474 EGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNV 533
G L NAEL+PMA+ ++E+G + V + R +++ +E+ +D E LC+ EKV+ +
Sbjct: 71 AGTLVTNAELAPMAAREYESGPPQEPGVELARVVDRGIREAPAVDFEELCIEEGEKVYTL 130
Query: 534 RVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPV 593
+D++VLN DGNLL ++ A+A+L PD + ++ E IPM P+
Sbjct: 131 FIDVHVLNDDGNLLDAAALGAMASLKDGFLPDYNEE-EGLLREQPEEGSDIPME--SVPI 187
Query: 594 TIS 596
T +
Sbjct: 188 TAT 190
>gi|170292235|pdb|2PNZ|B Chain B, Crystal Structure Of The P. Abyssi Exosome Rnase Ph Ring
Complexed With Udp And Gmp
gi|170292237|pdb|2PO0|B Chain B, Crystal Structure Of The P. Abyssi Exosome Rnase Ph Ring
Complexed With Adp In Double Conformation
gi|170292240|pdb|2PO1|B Chain B, Crystal Structure Of The P. Abyssi Exosome Rnase Ph Ring
Complexed With A Single Stranded 10-Mer Poly(A) Rna
gi|170292242|pdb|2PO2|B Chain B, Crystal Structure Of The P. Abyssi Exosome Rnase Ph Ring
Complexed With Cdp
Length = 277
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
EI AG MRD + + KE KR D D+ E + E
Sbjct: 8 EIVAGIMRDHI-----------------INLLKEGKRIDDRGFEDYRPIEIEVGV-IEKA 49
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
E + ++VL + ++ P PN G++ N EL P+ASP FE G + ++ +
Sbjct: 50 EGSALVKLGSTQVLVGIKTSLGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDERAIEL 109
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R +++ +ESK ++LE + +V + V V +D++VL++DGNL+ IAA+AAL + R
Sbjct: 110 ARVIDRGIRESKALNLEKMVIVPGKIVRVVFIDVHVLDHDGNLMDAIGIAAIAALLNARV 169
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
P V + + + E +P+P+ + PVT +
Sbjct: 170 PKVRYNEETGEVETLDETEPLPVEKIPVPVTFA 202
>gi|405968426|gb|EKC33499.1| Exosome complex exonuclease RRP43 [Crassostrea gigas]
Length = 300
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 3/168 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N +S NG A+ + + V+ + PK P G + N ELSPM SPQF
Sbjct: 64 NVGCLSTANGSALV--KIGNTTVMCGIKAECAKPKTEEPAHGFIVPNVELSPMCSPQFRP 121
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G + + ++++F+ + K S CID++ LC+ VW + D+ L+Y GN+ C ++
Sbjct: 122 GMPGEQARVLSQFMLEVMKNSNCIDVKKLCIEPGRLVWTLYCDIVCLDYGGNVTDACVLS 181
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
LAAL + P+V D + ++ + + PV+ ++A+F+
Sbjct: 182 LLAALNNTVLPNVVLNKDTDKFEAFPDQS-TTLQLQSSPVSSTFAIFD 228
>gi|14520827|ref|NP_126302.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus abyssi GE5]
gi|29337009|sp|Q9V118.1|ECX2_PYRAB RecName: Full=Probable exosome complex exonuclease 2
gi|5458043|emb|CAB49533.1| RNAse PH-related exoribonuclease [Pyrococcus abyssi GE5]
gi|380741369|tpe|CCE70003.1| TPA: exosome complex RNA-binding protein Rrp42 [Pyrococcus abyssi
GE5]
Length = 274
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
EI AG MRD + + KE KR D D+ E + E
Sbjct: 5 EIVAGIMRDHI-----------------INLLKEGKRIDDRGFEDYRPIEIEVGV-IEKA 46
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
E + ++VL + ++ P PN G++ N EL P+ASP FE G + ++ +
Sbjct: 47 EGSALVKLGSTQVLVGIKTSLGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDERAIEL 106
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R +++ +ESK ++LE + +V + V V +D++VL++DGNL+ IAA+AAL + R
Sbjct: 107 ARVIDRGIRESKALNLEKMVIVPGKIVRVVFIDVHVLDHDGNLMDAIGIAAIAALLNARV 166
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
P V + + + E +P+P+ + PVT +
Sbjct: 167 PKVRYNEETGEVETLDETEPLPVEKIPVPVTFA 199
>gi|332157778|ref|YP_004423057.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus sp. NA2]
gi|331033241|gb|AEC51053.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus sp. NA2]
Length = 274
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
EI AG MRD + + KE KR D E++ IS E G
Sbjct: 5 EIVAGIMRDHI-----------------INLLKEGKRIDDR------GFEDYRPISIEVG 41
Query: 444 -----EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTD 498
E + ++VL + + P PN G++ N EL P+ASP FE G +
Sbjct: 42 IIEKAEGSALVKIGNTQVLVGIKTTLGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDE 101
Query: 499 TSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
++ + R +++ +ES+ ++LE + +V + V V +D++VL++DGNL+ IAA+AAL
Sbjct: 102 RAIELARVIDRGIRESRALNLEKMVIVPGKIVRVVFIDVHVLDHDGNLMDAIGIAAIAAL 161
Query: 559 AHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+ R P V + + EK+P+P+ + PVT +
Sbjct: 162 LNARVPKVRYNEETGEVEVLEEKEPLPVEKIPVPVTFA 199
>gi|148230376|ref|NP_001088781.1| uncharacterized protein LOC496046 [Xenopus laevis]
gi|56269196|gb|AAH87445.1| LOC496046 protein [Xenopus laevis]
Length = 276
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE R +F ++ N SI+ +G A+ + VL V P A
Sbjct: 16 RFLKEICRPDGRELTEFRTTTINVGSITTADGSALV--KLGNCTVLCGVKAEFAAPPADA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
PN+G + N +LSP+ S QF G + + + ++F+ S+ + E LC+ + W
Sbjct: 74 PNKGYVVPNVDLSPLCSSQFRPGPPGEEAQVASQFMADVIDNSQMLLKEDLCIRHGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGNLL C+ A +AAL + R P V ++ + K + IL +
Sbjct: 134 VLYCDLICLDYDGNLLDTCTCALVAALQNVRLPSV-KINEETGLAEVNLKTKCALKILKH 192
Query: 592 PVTISYAVFN 601
P+ S+AVF+
Sbjct: 193 PIATSFAVFD 202
>gi|119628984|gb|EAX08579.1| exosome component 8, isoform CRA_a [Homo sapiens]
Length = 316
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 57 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPSTDA 114
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + VW
Sbjct: 115 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVW 174
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 175 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 233
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 234 PVATSFAVFD 243
>gi|20090627|ref|NP_616702.1| exosome complex RNA-binding protein Rrp42 [Methanosarcina
acetivorans C2A]
gi|29336812|sp|Q8TGX5.1|ECX2_METAC RecName: Full=Probable exosome complex exonuclease 2
gi|19915669|gb|AAM05182.1| tRNA nucleotidyltransferase [Methanosarcina acetivorans C2A]
Length = 266
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V P +EG++ N EL+P+ASP+FE G + ++ + R +++ +E
Sbjct: 58 TQVLVGVKLQTGTPFPDSQDEGVIITNLELNPIASPEFEPGPPREEAIEMARVVDRGIRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S ID++ LC+ E VW V +D++VLN DGN++ +AA+AAL P+
Sbjct: 118 SGAIDIKKLCITVGESVWIVFIDVHVLNDDGNIIDASCLAAIAALMTTMVPN-------- 169
Query: 574 IIHSAAEKDPIPMTILHYPVTISYA 598
+ +P+ + PV I+ A
Sbjct: 170 --EQQGLGEDVPLAMKEMPVGITIA 192
>gi|52550471|gb|AAU84320.1| 3'-5' exoribonuclease [uncultured archaeon GZfos9D1]
Length = 257
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 72/112 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EVL V + P P++G++ NAEL P+ASP+FE+G + S+ + R +++ +
Sbjct: 56 TEVLVGVKVELGTPFPDTPDKGVIITNAELVPLASPKFESGPPNENSIQLARVVDRGIRG 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
S+ IDL+ LC+ EKVW V +D++VL+ +GNL ++ A+A+L + R P+
Sbjct: 116 SETIDLDKLCIEKGEKVWMVFIDIHVLDDNGNLADAAALGAIASLLNLRIPN 167
>gi|340505571|gb|EGR31888.1| hypothetical protein IMG5_100370 [Ichthyophthirius multifiliis]
Length = 355
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGRQ-TDTSVMINRFLEKCFKESK---------- 515
PK +PNEG LF +LS Q + + + S I + LEK K SK
Sbjct: 64 PKKEKPNEGFLFFKVDLSSTQDEQQQNLQNFKEYSNEIQKLLEKIIKGSKQFFQFKTKQK 123
Query: 516 ----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
ID+ SLC++ +KVWN+ V+ +V++ GNL+ + + +L HFR P + S
Sbjct: 124 IYKRAIDVASLCIITGKKVWNITVETSVISNGGNLIDNIYLCVMISLLHFRKPYI-SIEQ 182
Query: 572 QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q I +K+P P++I H P+ ++A+F +
Sbjct: 183 QSKIKIHPDKNPQPLSIHHMPIPFTFALFKNAT 215
>gi|195559992|ref|XP_002077384.1| GD19403 [Drosophila simulans]
gi|194202491|gb|EDX16067.1| GD19403 [Drosophila simulans]
Length = 289
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMVCVELVASDRAGSVKSVIFLGSIR 246
MDTKG+ E++TYP +CF +F+EVF V + EMVCVELVA+D+ G+V+ VIFLGSIR
Sbjct: 1 MDTKGQGEDITYPHICFKGKHFHEVFTHFFVHEWEMVCVELVANDKDGAVQGVIFLGSIR 60
Query: 247 YDALKR 252
YD +R
Sbjct: 61 YDFPER 66
>gi|84490040|ref|YP_448272.1| exosome complex RNA-binding protein Rrp42 [Methanosphaera
stadtmanae DSM 3091]
gi|84373359|gb|ABC57629.1| putative exosome complex, exonuclease 2 subunit [Methanosphaera
stadtmanae DSM 3091]
Length = 265
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 410 QTFHFWKESKRAQDWTDVDFMSSENWTS-ISAENGEAVWCPWVKPSEVLAQVSCNMVIPK 468
+ F + KR D ++ + T+ I +G A+ + + V+ V M P
Sbjct: 12 KVFDLLNQGKRIDDRKFSEYRNISIKTNYIGKADGSAMV--SIGCTTVIVGVKAQMTTPF 69
Query: 469 ATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEE 528
PN G++ N EL +AS FE G +V I+R +++ +ES +DL+ LCV+
Sbjct: 70 NNAPNSGIIITNTELLAIASRNFEYGPPNKFAVEISRVVDRAIRESPVVDLDKLCVIEGS 129
Query: 529 KVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTI 588
K W + +D+ ++++DGN++ + A+ AL + P TS +I+I E++ P+ I
Sbjct: 130 KSWKLHIDMYIVDFDGNIMDAACLGAICALLTTKIPTATSVNGEIVID---EENLTPLPI 186
Query: 589 LHYPVTISYAVFN 601
+ + + N
Sbjct: 187 KNRSILCTVVKIN 199
>gi|15678709|ref|NP_275825.1| exosome complex RNA-binding protein Rrp42 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|29336572|sp|O26778.1|ECX2_METTH RecName: Full=Probable exosome complex exonuclease 2
gi|295321489|pdb|2WNR|A Chain A, The Structure Of Methanothermobacter Thermautotrophicus
Exosome Core Assembly
gi|295321491|pdb|2WNR|C Chain C, The Structure Of Methanothermobacter Thermautotrophicus
Exosome Core Assembly
gi|295321493|pdb|2WNR|E Chain E, The Structure Of Methanothermobacter Thermautotrophicus
Exosome Core Assembly
gi|2621767|gb|AAB85187.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 271
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++++ V + P P G++ N+EL PMASP FE G + SV ++R +++C +E
Sbjct: 58 TQIIVGVKPQIGEPFPDTPEMGVILTNSELLPMASPTFEPGPPDERSVELSRVVDRCIRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ IDLE LC++ KVW + +DL++++YDGNL +A +AAL R P ++
Sbjct: 118 SRMIDLEKLCIIEGSKVWMLFLDLHIIDYDGNLFDAAVLATVAALLDTRIPAAEVEDGEV 177
Query: 574 IIHSAAEKDPIPM 586
+I+ + P+P+
Sbjct: 178 VINR-EKMQPLPV 189
>gi|21228726|ref|NP_634648.1| exosome complex RNA-binding protein Rrp42 [Methanosarcina mazei
Go1]
gi|29336794|sp|Q8PTT7.1|ECX2_METMA RecName: Full=Probable exosome complex exonuclease 2
gi|20907235|gb|AAM32320.1| Ribonuclease [Methanosarcina mazei Go1]
Length = 266
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V P +EG++ N EL+P+ASP+FE G + ++ + R +++ +E
Sbjct: 58 TQVLVGVKLQTGTPFPDSQDEGVIITNLELNPIASPEFEPGPPREDAIEMARVVDRGIRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S ID++ LC+ E VW V +D+++LN DGN++ +AA+AAL P+
Sbjct: 118 SGAIDIKKLCITVGESVWIVFIDVHILNNDGNIIDASCLAAIAALMTTMVPN-------- 169
Query: 574 IIHSAAEKDPIPMTILHYPVTISYA 598
+ +P+ + PV I+ A
Sbjct: 170 --EQQGLGENVPLAMKEMPVGITLA 192
>gi|452211131|ref|YP_007491245.1| Exosome complex exonuclease 2 [Methanosarcina mazei Tuc01]
gi|452101033|gb|AGF97973.1| Exosome complex exonuclease 2 [Methanosarcina mazei Tuc01]
Length = 263
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V P +EG++ N EL+P+ASP+FE G + ++ + R +++ +E
Sbjct: 55 TQVLVGVKLQTGTPFPDSQDEGVIITNLELNPIASPEFEPGPPREDAIEMARVVDRGIRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S ID++ LC+ E VW V +D+++LN DGN++ +AA+AAL P+
Sbjct: 115 SGAIDIKKLCITVGESVWIVFIDVHILNNDGNIIDASCLAAIAALMTTMVPN-------- 166
Query: 574 IIHSAAEKDPIPMTILHYPVTISYA 598
+ +P+ + PV I+ A
Sbjct: 167 --EQQGLGENVPLAMKEMPVGITLA 189
>gi|149635838|ref|XP_001511768.1| PREDICTED: exosome complex component RRP43-like [Ornithorhynchus
anatinus]
Length = 276
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFTAPPGDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
PN+G + N +L P+ S +F G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PNKGYVVPNVDLPPLCSSRFRPGPPGEEAQVASQFINDVIENSQLIAKEDLCISKGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P V ++ + K P+ I Y
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPAVV-INEETGLAEVNFKQKTPLNIRAY 192
Query: 592 PVTISYAVFN 601
P+ S+A+F+
Sbjct: 193 PIATSFAIFD 202
>gi|297527571|ref|YP_003669595.1| 3' exoribonuclease [Staphylothermus hellenicus DSM 12710]
gi|297256487|gb|ADI32696.1| 3' exoribonuclease [Staphylothermus hellenicus DSM 12710]
Length = 285
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V+ V + P + RPNEG+L ++AE P+ASP FE G + ++ R +++ +E K
Sbjct: 63 VITGVKLEIGTPYSDRPNEGVLQVHAEFVPLASPTFEPGPPDENAIETARVIDRSLREPK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ-II 574
I LE L V+ +KVW + DL ++++ GN++ ++ + AL + P + S D+ ++
Sbjct: 123 AIRLEDLVVIPGKKVWLIFNDLYLIDHYGNIIDTGMLSTMLALNMTKIPRIVSIEDENVV 182
Query: 575 IHSAAEKDPIPMTI 588
I ++ P+P+ +
Sbjct: 183 IDKTVKEAPLPLNL 196
>gi|443926780|gb|ELU45348.1| Opa-interacting protein OIP2 [Rhizoctonia solani AG-1 IA]
Length = 294
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 414 FWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPN 473
F + ++ W DV N SIS NG ++ + S ++ V + P RP+
Sbjct: 36 FRPDGRKVDAWRDVRI----NVGSISTANGSSLV--RIGDSTIVCGVKAEIAEPDLERPS 89
Query: 474 EGLLFINAELSPMASPQFETGRQTDTSVMINR---FLEKCFKESKCIDLESLCVVAEEKV 530
EG + N +L + SP+F+ G + + M++ L K S ID ++LC+ +
Sbjct: 90 EGFIVPNLDLPAICSPKFKPGPPAEEAQMLSEKITILTKLTYSSNAIDPKTLCIHPGKAA 149
Query: 531 WNVRVDLNVLNYDGNLLGCCSIAALAALAH----FRHPDVT---STGDQIIIHSAAEKDP 583
W + VD +NYDGN+L +A +AAL + R P T TG + + +
Sbjct: 150 WVIYVDAVCINYDGNILDATMLAVVAALQNGILPARIPVPTYDLDTGRT----TCSRTET 205
Query: 584 IPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQD 627
+P+ + H PVTIS+ +F+ S F E + LD A+ ++ D
Sbjct: 206 LPLALTHMPVTISFGIFDRAHLISDPSSFEEPL-LDAAITVTID 248
>gi|56118510|ref|NP_001007919.1| exosome component 8 [Xenopus (Silurana) tropicalis]
gi|51513372|gb|AAH80360.1| exosc8 protein [Xenopus (Silurana) tropicalis]
gi|89269528|emb|CAJ82996.1| exosome component 8 [Xenopus (Silurana) tropicalis]
Length = 276
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SI+ +G A+ + VL V P A P
Sbjct: 17 FLKEACRPDGRELTEFRTTTINVGSITTADGSALV--KLGNCTVLCGVKAEFTAPPADAP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G + N +L+P+ S QF G + + + ++F+ S+ + E LC+ + W
Sbjct: 75 NKGYVVPNVDLTPLCSSQFRPGPPGEEAQVASQFIADVIDNSQMLLKEDLCIAHGKLAWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ DL L+YDGNLL C A +AAL + R P V ++ + K + IL +P
Sbjct: 135 LYCDLICLDYDGNLLDTCMCALVAALQNVRLPSV-KINEETGLAEVNLKTKHALKILKHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VATSFAVFD 202
>gi|91772268|ref|YP_564960.1| exosome complex RNA-binding protein Rrp42 [Methanococcoides
burtonii DSM 6242]
gi|91711283|gb|ABE51210.1| Archaeal exosome complex exoribonuclease [Methanococcoides burtonii
DSM 6242]
Length = 259
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V + P A ++G++ + EL+P+ASP FE G + ++ + R +++ +E
Sbjct: 55 TQVLVGVKLQVGSPFADSADKGVIITSMELNPIASPNFEAGPPREKAIEMARVVDRGIRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S IDL LC+ E+VW V +D++VLN GNLL S+ A+AAL P
Sbjct: 115 SGAIDLNKLCITEGEEVWIVFIDVHVLNDSGNLLDAASLGAIAALMTATIPG-------- 166
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNG 602
+ + + I PV++S+ G
Sbjct: 167 --EREGRGEDVKLPIREMPVSLSFIDIGG 193
>gi|67474914|ref|XP_653189.1| exosome complex exonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56470120|gb|EAL47803.1| exosome complex exonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407042424|gb|EKE41318.1| exosome complex exonuclease, putative [Entamoeba nuttalli P19]
gi|449703501|gb|EMD43942.1| exosome complex exonuclease, putative [Entamoeba histolytica KU27]
Length = 265
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+++R ++ +V F+ E S+ G S+ L + V P +RP++G+
Sbjct: 15 DARRLDEFREVSFVCREPG-SVETHIGN---------SKALGECVVEPVCPGRSRPDQGI 64
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
I MA+P F R + I + +E+ ++ ID++ L ++ + VW + V
Sbjct: 65 FNIRVNFLEMANPNFYDSRGPRDLIEIGKVVERGLLSTRAIDVDGLVIIRGKLVWKITVC 124
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
++++N GNL+ SI A++AL +V G + I + E+ P+P+ I H P+T+S
Sbjct: 125 VHIINDCGNLMDLVSITAISALLTAVRREVQICGTDVKILTPEERKPVPLAIHHIPITVS 184
Query: 597 YAVFNGG 603
+ + G
Sbjct: 185 FGITESG 191
>gi|443692453|gb|ELT94047.1| hypothetical protein CAPTEDRAFT_173435 [Capitella teleta]
Length = 277
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SI +G A+ + + +L + MV P +G++ + L PM++PQF
Sbjct: 38 NVGSIDTADGSALV--KLGNTCILCGIKAEMVASNPETPEQGIVDSSVSLLPMSTPQFRD 95
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
D + F+E+ S C+DL+ LC+ + WN+ DL L+YDGN+L C +A
Sbjct: 96 RPPVDLAPSCTHFIEQLLTCSGCLDLKDLCIEKGKHAWNLHCDLMCLDYDGNVLDACCLA 155
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
+AAL + P VT + + A K+ P+++ PV+ + A+F
Sbjct: 156 LIAALKNTVLPKVTIDEESGTVKLDA-KEKHPLSVNAVPVSTTLAIF 201
>gi|304314829|ref|YP_003849976.1| exosome RNA binding protein [Methanothermobacter marburgensis str.
Marburg]
gi|302588288|gb|ADL58663.1| predicted exosome RNA binding protein [Methanothermobacter
marburgensis str. Marburg]
Length = 267
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 61/93 (65%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++++ V + P P G++ N+EL PMASP FE G + SV ++R +++C +E
Sbjct: 54 TQIIVGVKPQIGEPFPDTPEMGVILTNSELLPMASPTFEPGPPDERSVELSRVVDRCVRE 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNL 546
S+ IDLE LC++ KVW + +DL++++YDGNL
Sbjct: 114 SQMIDLEKLCIIEGSKVWMLFLDLHIIDYDGNL 146
>gi|122920909|pdb|2NN6|C Chain C, Structure Of The Human Rna Exosome Composed Of Rrp41,
Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
Length = 278
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 18 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPSTDA 75
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + VW
Sbjct: 76 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVW 135
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 136 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 194
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 195 PVATSFAVFD 204
>gi|2815604|gb|AAC39558.1| Opa-interacting protein OIP2 [Homo sapiens]
Length = 265
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 14 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPSTDA 71
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + VW
Sbjct: 72 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVW 131
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 132 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 190
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 191 PVATSFAVFD 200
>gi|218884634|ref|YP_002429016.1| exosome complex RNA-binding protein Rrp42 [Desulfurococcus
kamchatkensis 1221n]
gi|218766250|gb|ACL11649.1| Probable exosome complex exonuclease 2 [Desulfurococcus
kamchatkensis 1221n]
Length = 286
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P RP EG+L ++AE P+ASP FE G + ++ + R +++ +E
Sbjct: 61 TQVIAGVKLELEEPFPDRPGEGVLQVHAEFVPLASPSFEPGPPDENAIEVARVIDRSLRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SK + L++L + + VW+V D+ ++++ GN++ +A++ ALA R P++ +
Sbjct: 121 SKAVKLDALAIEPGKIVWSVYTDIYLVDHQGNIIDTGMLASMLALATSRIPELIKGENGY 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ P+P+ L T++ ++N
Sbjct: 181 KVDHTKYVGPLPINTLV--ATVTMGIYN 206
>gi|31415882|ref|NP_852480.1| exosome complex component RRP43 [Homo sapiens]
gi|21759409|sp|Q96B26.1|EXOS8_HUMAN RecName: Full=Exosome complex component RRP43; AltName:
Full=Exosome component 8; AltName: Full=Opa-interacting
protein 2; Short=OIP-2; AltName: Full=Ribosomal
RNA-processing protein 43; AltName: Full=p9
gi|18088472|gb|AAH20773.1| Exosome component 8 [Homo sapiens]
gi|123992916|gb|ABM84060.1| exosome component 8 [synthetic construct]
gi|123999809|gb|ABM87413.1| exosome component 8 [synthetic construct]
gi|208966244|dbj|BAG73136.1| exosome component 8 [synthetic construct]
Length = 276
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPSTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + VW
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|148225933|ref|NP_001079391.1| exosome component 8 [Xenopus laevis]
gi|27371055|gb|AAH41271.1| MGC52847 protein [Xenopus laevis]
gi|76779666|gb|AAI06634.1| MGC52847 protein [Xenopus laevis]
Length = 276
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SI+ +G A+ + VL V + P A
Sbjct: 16 RFLKEACRPDGRELTEFRTTTINVGSITTADGSALV--KLGNCTVLCGVKAELAAPPADS 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L+P+ S QF G + + + ++F+ S+ + E LC+ + W
Sbjct: 74 PDKGYVVPNVDLTPLCSSQFRPGPPGEEAQVASQFMADVIDNSQMLLKEDLCIAHGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGNLL C A +AAL + R P V ++ + K + IL +
Sbjct: 134 VLYCDLICLDYDGNLLDTCMCALVAALQNVRLPSV-KINEETGLAEVNLKTKCALKILKH 192
Query: 592 PVTISYAVFN 601
PV S+A+F+
Sbjct: 193 PVATSFALFD 202
>gi|114649397|ref|XP_522661.2| PREDICTED: exosome complex component RRP43 isoform 4 [Pan
troglodytes]
gi|397513274|ref|XP_003826944.1| PREDICTED: exosome complex component RRP43 [Pan paniscus]
Length = 276
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + VW
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|291408704|ref|XP_002720651.1| PREDICTED: exosome component 8 [Oryctolagus cuniculus]
Length = 276
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ + P A
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPADA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSRIIQKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|403286361|ref|XP_003934463.1| PREDICTED: exosome complex component RRP43 [Saimiri boliviensis
boliviensis]
Length = 276
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V +P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAVPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|119628986|gb|EAX08581.1| exosome component 8, isoform CRA_c [Homo sapiens]
Length = 275
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPSTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + VW
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|302772296|ref|XP_002969566.1| hypothetical protein SELMODRAFT_91353 [Selaginella moellendorffii]
gi|300163042|gb|EFJ29654.1| hypothetical protein SELMODRAFT_91353 [Selaginella moellendorffii]
Length = 364
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 57/285 (20%)
Query: 72 TSYWTDLFVRYFLFQ-TDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVF------RK 124
+ +W ++ +F+ +S DDLLFFV ++ F E ++F R+
Sbjct: 29 SHFWQEMLDMFFVRGLVESKTTSDDLLFFVNLLSLEFGGGG---FNDEGKIFAEPCFVRR 85
Query: 125 DSRKLP--IGDP--DVDWEETVYLNMIIHQFDYTLTLAICTR--------TSPKHLQVLK 172
+L +GD +VDW + YLN+++H YTLT++IC+R +S L+ +
Sbjct: 86 WQPQLSKVLGDRTREVDWRRSFYLNLVVHT-TYTLTVSICSREELLRYRNSSGSSLESIY 144
Query: 173 RHSQKVYASPSRRRMDTKGEVEEMT---YPCVCFTVDNFNEVF-HDILVRDGEMVCVELV 228
+ ++ V+ASPSR TK T YP + F+VD+ ++ F H IL + CV L
Sbjct: 145 KITKNVFASPSRSNFQTKSSKASETVSSYPDIYFSVDDHDDTFEHLILKNEDHCYCVLLH 204
Query: 229 ASDRA------------GSVKSVI---FLGSIRYDALKRVYDARTSVSNKFTQRMSFGIF 273
A+ A GS S + F G + Y+ ++ ++ + ++SFG
Sbjct: 205 ATGGAAFGSGRLIRGKDGSRSSAVVTLFSGFVSYEMVRSAFE---------SGKLSFGFL 255
Query: 274 SNNSNSRIEFVKMKGPQGKGFAEMAVTK---PKGYGVETPTSEPG 315
S E + M+GP G+G ++ VT+ K Y E P PG
Sbjct: 256 HLGGKS--ERLVMRGPGGRGEVDVIVTRVPGSKNYFYE-PVEAPG 297
>gi|126465759|ref|YP_001040868.1| exosome complex RNA-binding protein Rrp42 [Staphylothermus marinus
F1]
gi|126014582|gb|ABN69960.1| ribosomal RNA-processing protein RRP42 [Staphylothermus marinus F1]
Length = 285
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 99/194 (51%), Gaps = 20/194 (10%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
V+ V + P + RPNEG+L ++AE P+ASP FE G + ++ R +++ +E +
Sbjct: 63 VITGVKLEIGTPYSDRPNEGVLQVHAEFVPLASPTFEPGPPDENAIETARVIDRSLREPR 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ-II 574
I LE L V+ +KVW + DL ++++ GN++ ++ + AL + P + S D+ ++
Sbjct: 123 AIRLEDLVVIPGKKVWLIFNDLYLIDHYGNIVDTGMLSTMLALNMTKIPRIVSIEDENVV 182
Query: 575 IHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDRQKLGVD 634
I ++ P+P+ + VT++ + + D + ++L VD
Sbjct: 183 IDKTVKEAPLPLNL--NVVTVTLGIID-----------------DVIIVDPNIEEELVVD 223
Query: 635 SAYANLVNKTDRIL 648
S V++T+RI+
Sbjct: 224 SRITFAVDETNRIV 237
>gi|302774835|ref|XP_002970834.1| hypothetical protein SELMODRAFT_94386 [Selaginella moellendorffii]
gi|300161545|gb|EFJ28160.1| hypothetical protein SELMODRAFT_94386 [Selaginella moellendorffii]
Length = 367
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 56/284 (19%)
Query: 72 TSYWTDLFVRYFLFQ-TDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVF------RK 124
+ +W ++ +F+ S DDLLFFV ++ F E ++F R+
Sbjct: 29 SHFWQEMLDMFFVRGLVQSKTTSDDLLFFVNLLSLEFGGGG---FNDEGKIFAEPCFVRR 85
Query: 125 DSRKLP--IGDP--DVDWEETVYLNMIIHQFDYTLTLAICTR--------TSPKHLQVLK 172
+L +GD +VDW + YLN+++H YTLT++IC+R +S L+ +
Sbjct: 86 WQPQLSKVLGDRTREVDWRRSFYLNLVVHT-TYTLTVSICSREELLRYRNSSGSSLESIY 144
Query: 173 RHSQKVYASPSRRRMDTKGEVEEMT---YPCVCFTVDNFNEVF-HDILVRDGEMVCVELV 228
+ ++ V+ASPSR TK T YP + F+VD+ ++ F H IL + CV L
Sbjct: 145 KITKNVFASPSRSNFQTKSSKASETVSSYPDIYFSVDDHDDTFEHLILKNEDHCYCVLLH 204
Query: 229 ASDRA------------GSVKSVI---FLGSIRYDALKRVYDARTSVSNKFTQRMSFGIF 273
A+ A GS S + F G + Y+ ++ ++ + ++SFG
Sbjct: 205 ATGGAAFGSGRLIRGKDGSRSSAVVTLFSGFVSYEMVRSAFE---------SGKLSFGFL 255
Query: 274 SNNSNSRIEFVKMKGPQGKGFAEMAVTK---PKGYGVETPTSEP 314
S E + M+GP G+G ++ VT+ P VE P+ P
Sbjct: 256 HLGGKS--ERLVMRGPGGRGEVDVIVTRVPDPSEEPVEAPSPIP 297
>gi|348583439|ref|XP_003477480.1| PREDICTED: exosome complex component RRP43-like [Cavia porcellus]
Length = 276
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ + +P A
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAVPPADA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+V + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVRINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|356514523|ref|XP_003525955.1| PREDICTED: uncharacterized protein KIAA0930-like [Glycine max]
Length = 394
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 53/272 (19%)
Query: 74 YWTDLFVRYFLFQTDS-NIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-I 131
+W D+F YF+ +S DDL+FFVRK S N + R+ + KL +
Sbjct: 44 FWHDVFDLYFVCGKESRGRQDDDLVFFVRKLGSHGSGSNNKTESVDPYFVRRWAPKLSDL 103
Query: 132 GDP---DVDWEETVYLNMIIHQFDYTLTLAICTRTSPKH--------LQVLKRHSQKVYA 180
D DVDW + YLN+I H +++T+AIC+ + L + + + VYA
Sbjct: 104 VDETSIDVDWRRSFYLNLIAHT-SFSVTVAICSHQDLLNHRAGEDTPLSPIYKVVKTVYA 162
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG-- 234
SPSR ++D+K +E YP +CF +D+F+ F +++ + + CV L A D A
Sbjct: 163 SPSRVNFQLDSKKAMETTPAYPDICFAIDDFDSTFDAVVLTEKDHCYCVVLNAHDGAAFP 222
Query: 235 --------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRM 268
K +F G + Y ++ YDA S +F +
Sbjct: 223 SEKVSNDCSTSDSSSLQVHTISAKKKDTKLTLFSGFVSYQMVRDAYDAGRS---RFGSLL 279
Query: 269 SFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
S +S+ + + + MKGP G+G E+AV+
Sbjct: 280 SV----VHSSGKTDRIYMKGPGGRGEVEVAVS 307
>gi|307187131|gb|EFN72375.1| Exosome complex exonuclease RRP43 [Camponotus floridanus]
Length = 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 7/171 (4%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N +SI + A++ + + + + + PKA P+ G + N ELSP+ SP+F
Sbjct: 36 SVNVSSIVQADSSAIF--KLGDTSAVCGIKAELATPKADIPDHGYIVPNVELSPLCSPKF 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G ++ + ++++ ++ S+ +DL+ LC+ + VW + D+ LNY+G+++ C
Sbjct: 94 RPGPPSEQAQVLSKLIDIVLSNSRALDLKDLCICKNKLVWVLYCDILCLNYNGSVIDACI 153
Query: 552 IAALAALAHFRHPDVTSTGDQ--IIIHSAAEKDPIPMTILHYPVTISYAVF 600
A +AAL P++ + I+ H K T+ PV+ S+A+F
Sbjct: 154 GAMIAALKTLTLPEINYNSETGVIVTHPENRKA---FTVRTLPVSASFAIF 201
>gi|242040017|ref|XP_002467403.1| hypothetical protein SORBIDRAFT_01g027460 [Sorghum bicolor]
gi|241921257|gb|EER94401.1| hypothetical protein SORBIDRAFT_01g027460 [Sorghum bicolor]
Length = 457
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 53/285 (18%)
Query: 74 YWTDLFVRYFL-FQTDSNIDCDDLLFFVRKKYIKTSSRN-----LPKFETEVEVFRKDSR 127
+W ++ +F+ + + DDL+FFV + N P F V +
Sbjct: 117 FWHEMLDLFFVRGRQPKRSEDDDLVFFVNNMKLHGYGFNDNMEDPPPFF--VRRWAPTLE 174
Query: 128 KLPIGDPDVDWEETVYLNMIIHQFDYTLTLAIC-------TRTSPKHLQVLKRHSQKVYA 180
K+ I +VDWE + YLN+I H YT+T+AI K L + + ++ VYA
Sbjct: 175 KISINTVEVDWERSFYLNLIAHT-SYTVTVAIFGIGDLRNRAAKSKQLSPVYKVTKTVYA 233
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRA--- 233
SPSR +D + VE + YP + F+VD+F++ F +++ D E CV L A D A
Sbjct: 234 SPSRVNFHLDRRKAVETVPAYPNIFFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFP 293
Query: 234 ------------------GSV-----KSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSF 270
GS K +F G + Y ++ YDA S KF +S
Sbjct: 294 EETESKNPVSNIQPGVSCGSAQEKPPKRTLFSGYVSYQNVREAYDAGRS---KFGSFLSL 350
Query: 271 GIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
G + +++++ + M+GP+G+G E+AV E +PG
Sbjct: 351 G----HDHNKLDRLFMRGPEGRGEVEVAVCGIADQSREKSKKDPG 391
>gi|219129572|ref|XP_002184959.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403454|gb|EEC43406.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 269
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 441 ENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTS 500
ENG W K + V + ++ P RPNEG++ ++ +LSP AS F T
Sbjct: 22 ENGATCTTQWGKGTRVSCTCTAELLPPNPDRPNEGMVALSVDLSPSASTAFRQAAPVTTG 81
Query: 501 VMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAH 560
I R LE+ +D E+LCV + VW + + + VL+ GNL+ +AALAAL H
Sbjct: 82 GSILRSLERVLLTGGALDTEALCVTPQYWVWKLSLAVTVLDDGGNLMDASVLAALAALRH 141
Query: 561 FRHPDV------TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
+R P V +++G + K+P+P+ + H P++IS+A+
Sbjct: 142 YRKPHVELAAEGSNSGVPPRWIQSDLKEPVPLPLHHTPLSISFALL 187
>gi|149730159|ref|XP_001495596.1| PREDICTED: exosome complex component RRP43-like [Equus caballus]
Length = 276
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ + P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTISEETALAEVNLKKKSF-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|167392472|ref|XP_001740171.1| exosome complex exonuclease RRP45 [Entamoeba dispar SAW760]
gi|165895849|gb|EDR23438.1| exosome complex exonuclease RRP45, putative [Entamoeba dispar
SAW760]
Length = 244
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 79/150 (52%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S+ L + V P +RP++G+ I MA+P F R + I + +E+
Sbjct: 42 SKALGECVVEPVSPGRSRPDQGIFNIRVNFLEMANPNFYDSRGPRDLIEIGKVVERGLLS 101
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
++ ID++ L ++ + VW + V ++++N GNL+ SI A++AL +V G +
Sbjct: 102 TRAIDVDGLVIIRGKLVWKITVCVHIINDCGNLMDLVSITAISALLTAVRREVQICGTDV 161
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
I + E+ P+P+ I H P+T+S+ + + G
Sbjct: 162 KILTPEERKPVPLAIHHIPITVSFGITDSG 191
>gi|337283875|ref|YP_004623349.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus yayanosii
CH1]
gi|334899809|gb|AEH24077.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus yayanosii
CH1]
Length = 268
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 384 EIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG 443
E+ AG MRD + KE KR D D+ E + E
Sbjct: 2 EVMAGIMRDHI-----------------LSILKEGKRIDDRGFEDYRPIEIQVGV-IEKA 43
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
E + ++VL + ++ P PN G++ N EL P+ASP FE G + ++ +
Sbjct: 44 EGSALVKLGNTQVLVGIKLDLGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDERAIEL 103
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
R +++ +ESK +DLE L +V + V V +D++VL++DGNL+ IAA+AAL + +
Sbjct: 104 ARVVDRGIRESKALDLEKLVIVPGKLVRVVFIDVHVLDHDGNLMDAIGIAAIAALLNAKM 163
Query: 564 PDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
P V ++ + E +P+P+ + PVT +
Sbjct: 164 PKVEYDEEKGEVTILDEWEPLPVQKIPIPVTFA 196
>gi|209879934|ref|XP_002141407.1| 3' exoribonuclease family protein [Cryptosporidium muris RN66]
gi|209557013|gb|EEA07058.1| 3' exoribonuclease family protein, putative [Cryptosporidium muris
RN66]
Length = 414
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMA-SPQFETGR--QTDTSVMINRFL 507
+ + VL + ++IP RP+EG + + + P++ +P + R + S+ + ++
Sbjct: 41 IGKTHVLCIIKAELMIPNIDRPSEGQVTFSVDYGPLSLNPNGQVYRHERNALSIELANYI 100
Query: 508 EKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT 567
E+ KE+ D E LC+++ W++R D+ L DGNL C +A L+A HFR+ D+
Sbjct: 101 ERTLKETGAFDTEVLCIISGLCAWSIRCDIRALCDDGNLFDTCILATLSAFRHFRYKDID 160
Query: 568 STG-------------DQIIIHSAAEK-DPIPMTILHYPVTIS 596
+ D + I A + D IP+ I H+P++IS
Sbjct: 161 CSSFLNKLKLNKYKNKDYLRIEQAIKNMDMIPLNIYHFPLSIS 203
>gi|332242319|ref|XP_003270334.1| PREDICTED: exosome complex component RRP43 [Nomascus leucogenys]
Length = 276
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYIVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|390939120|ref|YP_006402858.1| 3' exoribonuclease [Desulfurococcus fermentans DSM 16532]
gi|390192227|gb|AFL67283.1| 3' exoribonuclease [Desulfurococcus fermentans DSM 16532]
Length = 286
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P RP EG+L ++AE P+ASP FE G + ++ + R +++ +E
Sbjct: 61 TQVIAGVKLELEEPFPDRPGEGVLQVHAEFVPLASPSFEPGPPDENAIEVARVIDRSLRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SK + L++L + + W+V D+ ++++ GN++ +A++ ALA R P++ +
Sbjct: 121 SKAVKLDALAIEPGKIAWSVYTDIYLVDHQGNIIDTSMLASMLALATSRIPELIKGENGY 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ P+P+ L T++ ++N
Sbjct: 181 KVDHTKYVGPLPINTLV--ATVTMGIYN 206
>gi|148642301|ref|YP_001272814.1| exosome complex RNA-binding protein Rrp42 [Methanobrevibacter
smithii ATCC 35061]
gi|148551318|gb|ABQ86446.1| ribonuclease PH-related protein [Methanobrevibacter smithii ATCC
35061]
Length = 262
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 71/122 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ + + P P+ G+L N E+ PMA P FE G ++ S+ + R +++ +E
Sbjct: 55 TQVIVGIKPQIGAPFPDTPDLGVLMTNCEMLPMADPTFEPGPPSEDSIELARVVDRGIRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +DL+ LCV + VW + +DL++++ GNL C +A +AAL + P + D++
Sbjct: 115 SELVDLDKLCVEEGKHVWMLFIDLHIIDNCGNLFDACELAVMAALKSTKLPSASIADDEV 174
Query: 574 II 575
++
Sbjct: 175 VL 176
>gi|360044264|emb|CCD81811.1| putative exosome complex exonuclease rrp45
(polymyositis/scleroderma autoantigen 1) (ribosomal rna
processing protein 45) [Schistosoma mansoni]
Length = 471
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
Query: 448 CPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFIN--AELSPMASPQFETGRQTDTSVMI 503
C VK + V+AQVS ++ PK RP++G+LF++ A + ++ + ++ D +
Sbjct: 46 CCVVKIGATTVMAQVSVEVIEPKHFRPSQGMLFVHFDASILKLSKTLYRKQKRDDEGRRL 105
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
+ L+ ++S IDL++LC+VA E+V+ VRV+L L+YDGNL C ++AA+AALA FR
Sbjct: 106 SAVLQTLLRDS--IDLDALCIVAWERVFAVRVELRALSYDGNLGDCGTLAAVAALAAFRR 163
Query: 564 PDVT--STGDQIIIHSAAEKDPIPMTILHYPVTISYAV 599
PDV G ++ A + +P+ I PV ++ +
Sbjct: 164 PDVYVDDMGKVLVDFEAKFRPRVPLGIRRTPVLVTLGL 201
>gi|395861770|ref|XP_003803149.1| PREDICTED: exosome complex component RRP43 [Otolemur garnettii]
Length = 280
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 20 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDA 77
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 78 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAW 137
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+V + + +K + I Y
Sbjct: 138 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVIINEETALAEVNLKKKSY-LNIRTY 196
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 197 PVATSFAVFD 206
>gi|355754637|gb|EHH58538.1| Exosome complex exonuclease RRP43, partial [Macaca fascicularis]
Length = 272
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 12 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDA 69
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 70 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAW 129
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 130 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 188
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 189 PVATSFAVFD 198
>gi|222444528|ref|ZP_03607043.1| hypothetical protein METSMIALI_00140 [Methanobrevibacter smithii
DSM 2375]
gi|222434093|gb|EEE41258.1| 3' exoribonuclease family, domain 1 [Methanobrevibacter smithii DSM
2375]
Length = 265
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 71/122 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ + + P P+ G+L N E+ PMA P FE G ++ S+ + R +++ +E
Sbjct: 58 TQVIVGIKPQIGAPFPDTPDLGVLMTNCEMLPMADPTFEPGPPSEDSIELARVVDRGIRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +DL+ LCV + VW + +DL++++ GNL C +A +AAL + P + D++
Sbjct: 118 SELVDLDKLCVEEGKHVWMLFIDLHIIDNCGNLFDACELAVMAALKSTKLPSASIADDEV 177
Query: 574 II 575
++
Sbjct: 178 VL 179
>gi|386782149|ref|NP_001247467.1| exosome component 8 [Macaca mulatta]
gi|402901796|ref|XP_003913826.1| PREDICTED: exosome complex component RRP43 [Papio anubis]
gi|384945128|gb|AFI36169.1| exosome complex component RRP43 [Macaca mulatta]
Length = 276
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|297693867|ref|XP_002824217.1| PREDICTED: exosome complex component RRP43 [Pongo abelii]
Length = 276
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNVGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + VW
Sbjct: 74 PDTGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + + +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|288869793|ref|ZP_06409499.1| putative exosome complex exonuclease 2 [Methanobrevibacter smithii
DSM 2374]
gi|288860271|gb|EFC92569.1| putative exosome complex exonuclease 2 [Methanobrevibacter smithii
DSM 2374]
Length = 265
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 71/122 (58%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ + + P P+ G+L N E+ PMA P FE G ++ S+ + R +++ +E
Sbjct: 58 TQVIVGIKPQIGAPFPDTPDLGVLMTNCEMLPMADPTFEPGPPSEDSIELARVVDRGIRE 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +DL+ LCV + VW + +DL++++ GNL C +A +AAL + P + D++
Sbjct: 118 SELVDLDKLCVEEGKHVWMLFIDLHIIDNCGNLFDACELAVMAALKSTKLPSASIADDEV 177
Query: 574 II 575
++
Sbjct: 178 VL 179
>gi|116754658|ref|YP_843776.1| exosome complex RNA-binding protein Rrp42 [Methanosaeta thermophila
PT]
gi|116666109|gb|ABK15136.1| ribosomal RNA-processing protein RRP42 [Methanosaeta thermophila
PT]
Length = 257
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 61/98 (62%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVA 526
P PN G++ NAEL P+ASP FE G + + + R +++ +ES +DL++LC+V
Sbjct: 68 PFPDAPNRGVIVTNAELVPLASPIFEPGPPNEYGIELARVVDRGVRESGSVDLDALCIVP 127
Query: 527 EEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
EKVW + +D+++L+ GN++ S+ A+AAL P
Sbjct: 128 GEKVWIIFIDIHILDDCGNIMDASSLGAIAALLGATVP 165
>gi|256079799|ref|XP_002576172.1| exonuclease rrp45 [Schistosoma mansoni]
Length = 446
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
Query: 448 CPWVK--PSEVLAQVSCNMVIPKATRPNEGLLFIN--AELSPMASPQFETGRQTDTSVMI 503
C VK + V+AQVS ++ PK RP++G+LF++ A + ++ + ++ D +
Sbjct: 21 CCVVKIGATTVMAQVSVEVIEPKHFRPSQGMLFVHFDASILKLSKTLYRKQKRDDEGRRL 80
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
+ L+ ++S IDL++LC+VA E+V+ VRV+L L+YDGNL C ++AA+AALA FR
Sbjct: 81 SAVLQTLLRDS--IDLDALCIVAWERVFAVRVELRALSYDGNLGDCGTLAAVAALAAFRR 138
Query: 564 PD--VTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAV 599
PD V G ++ A + +P+ I PV ++ +
Sbjct: 139 PDVYVDDMGKVLVDFEAKFRPRVPLGIRRTPVLVTLGL 176
>gi|332374620|gb|AEE62451.1| unknown [Dendroctonus ponderosae]
Length = 174
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SIS +G A+ V + V+ V + P+ PN+G L N ELSP+ S +F++
Sbjct: 38 NVGSISTADGSAI--AKVGKTTVICGVKAELCRPRPECPNKGFLVPNLELSPLCSSKFKS 95
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G + + ++ + + + S+CI+LE LC++ ++ W + DL L+YDG+LL C +A
Sbjct: 96 GPPGEEAQVLTQLIADVIENSRCINLEELCLLKDKLAWCLYADLVCLDYDGSLLDACIVA 155
Query: 554 ALAAL 558
+A L
Sbjct: 156 LMACL 160
>gi|308807186|ref|XP_003080904.1| putative polymyositis/scleroderma autoantigen (ISS) [Ostreococcus
tauri]
gi|116059365|emb|CAL55072.1| putative polymyositis/scleroderma autoantigen (ISS) [Ostreococcus
tauri]
Length = 869
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 460 VSCNMVIPKATRPN------EGLLFINAELSPMASPQF-ETGRQTDTSVMINR----FLE 508
++C + RP EG L ++ E S A F GR + + +R LE
Sbjct: 483 LACATTTGQLERPASAGASAEGSLRVDVEFSSGACTGFARDGRASRETRQRSRDLGMLLE 542
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD--V 566
+ K+ + +D+ESLCV+A ++ W + + +L +DGNL G S+AA +L +R P+ V
Sbjct: 543 RGLKDGRAVDVESLCVLAGKRTWAITCSVTILAHDGNLAGVASLAACGSLMTYRRPECSV 602
Query: 567 TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ +HS ++ I + + H+P+ +Y F+
Sbjct: 603 DPNSGIVTVHSVDAREAIALNMHHFPIASTYCFFD 637
>gi|358335737|dbj|GAA29354.2| exosome complex component RRP45 [Clonorchis sinensis]
Length = 474
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 99/164 (60%), Gaps = 6/164 (3%)
Query: 439 SAENGEAVWCPW-VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
SAE+ C + + V+A+VS ++ PK +RP++G+LF+N +++ + P + +
Sbjct: 68 SAEDDHNSCCIVNIGATSVVARVSAEVLEPKPSRPSQGMLFVNFDVT-LIHPNAASRHKI 126
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAA 557
+ ++ L+ ++S +DL+SLC+VA E+V+ +RV+L L+YDGNL C ++AA++A
Sbjct: 127 EEGRRLSSVLQTLLRDS--VDLDSLCIVAWERVFAIRVELRALSYDGNLGDCGALAAISA 184
Query: 558 LAHFRHPDV-TSTGDQIIIHSAAEKDP-IPMTILHYPVTISYAV 599
LA FR PDV + + + A+ P + + + PV +++ +
Sbjct: 185 LAAFRRPDVFVQDNGTVTVDTEAKYRPRVALGLRRIPVLVTFGM 228
>gi|440896423|gb|ELR48345.1| Exosome complex exonuclease RRP43, partial [Bos grunniens mutus]
Length = 291
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SI +G A+ + + V+ + P P
Sbjct: 31 FLKENCRPDGRELGEFRTTTVNVGSIGTADGSALV--KLGNTTVICGIKAEFGAPPTDAP 88
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
++G + N +LSP+ S +F +G + + + ++F+ + S+ I E LC+ + + W
Sbjct: 89 DKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWV 148
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ DL LN+DGN+L C+ A LAAL + + P+VT + + +K + I +P
Sbjct: 149 LYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTHP 207
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 208 VATSFAVFD 216
>gi|126031137|pdb|2JE6|A Chain A, Structure Of A 9-Subunit Archaeal Exosome
gi|145579800|pdb|2JEA|A Chain A, Structure Of A 9-Subunit Archaeal Exosome Bound To Rna
gi|145579804|pdb|2JEB|A Chain A, Structure Of A 9-Subunit Archaeal Exosome Bound To Mn Ions
gi|407943801|pdb|4BA1|A Chain A, Archaeal Exosome (rrp4-rrp41(d182a)-rrp42) Bound To
Inorganic Phosphate
gi|407943804|pdb|4BA2|A Chain A, Archaeal Exosome (rrp4-rrp41(d182a)-rrp42) Bound To
Inorganic Phosphate
Length = 277
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA + P PN+G L +N EL P+A FE G + ++ + R +++ ++SK
Sbjct: 65 VLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSK 124
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L + + VW V +D+ VL+Y GN+L C++A++AAL + + V + I +
Sbjct: 125 ALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISV 184
Query: 576 HSAAEKDPIPMTILHYP-VTISYA 598
+ +P L+YP VTIS A
Sbjct: 185 NKNEVVGKLP---LNYPVVTISVA 205
>gi|426375219|ref|XP_004054442.1| PREDICTED: exosome complex component RRP43 [Gorilla gorilla
gorilla]
Length = 276
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + VW
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+V + + +K + I +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVIINEETALAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|15897635|ref|NP_342240.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus solfataricus
P2]
gi|284174961|ref|ZP_06388930.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus solfataricus
98/2]
gi|384434250|ref|YP_005643608.1| 3' exoribonuclease [Sulfolobus solfataricus 98/2]
gi|29337006|sp|Q9UXC0.1|ECX2_SULSO RecName: Full=Probable exosome complex exonuclease 2
gi|71042716|pdb|2BR2|A Chain A, Rnase Ph Core Of The Archaeal Exosome
gi|71042718|pdb|2BR2|C Chain C, Rnase Ph Core Of The Archaeal Exosome
gi|71042720|pdb|2BR2|E Chain E, Rnase Ph Core Of The Archaeal Exosome
gi|71042722|pdb|2BR2|G Chain G, Rnase Ph Core Of The Archaeal Exosome
gi|71042724|pdb|2BR2|I Chain I, Rnase Ph Core Of The Archaeal Exosome
gi|71042726|pdb|2BR2|K Chain K, Rnase Ph Core Of The Archaeal Exosome
gi|71042728|pdb|2BR2|M Chain M, Rnase Ph Core Of The Archaeal Exosome
gi|71042730|pdb|2BR2|O Chain O, Rnase Ph Core Of The Archaeal Exosome
gi|71042732|pdb|2BR2|Q Chain Q, Rnase Ph Core Of The Archaeal Exosome
gi|71042734|pdb|2BR2|S Chain S, Rnase Ph Core Of The Archaeal Exosome
gi|71042736|pdb|2BR2|U Chain U, Rnase Ph Core Of The Archaeal Exosome
gi|71042738|pdb|2BR2|W Chain W, Rnase Ph Core Of The Archaeal Exosome
gi|83754538|pdb|2C37|A Chain A, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754540|pdb|2C37|C Chain C, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754542|pdb|2C37|E Chain E, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754544|pdb|2C37|G Chain G, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754546|pdb|2C37|I Chain I, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754548|pdb|2C37|K Chain K, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754550|pdb|2C37|M Chain M, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754552|pdb|2C37|O Chain O, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754554|pdb|2C37|Q Chain Q, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754556|pdb|2C37|S Chain S, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754558|pdb|2C37|U Chain U, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754560|pdb|2C37|W Chain W, Rnase Ph Core Of The Archaeal Exosome In Complex With U8
Rna
gi|83754562|pdb|2C38|A Chain A, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754566|pdb|2C38|E Chain E, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754568|pdb|2C38|G Chain G, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754570|pdb|2C38|I Chain I, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754572|pdb|2C38|K Chain K, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754574|pdb|2C38|M Chain M, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754576|pdb|2C38|O Chain O, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754578|pdb|2C38|Q Chain Q, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754580|pdb|2C38|S Chain S, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754582|pdb|2C38|U Chain U, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|83754586|pdb|2C39|A Chain A, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754588|pdb|2C39|C Chain C, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754590|pdb|2C39|E Chain E, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754592|pdb|2C39|G Chain G, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754594|pdb|2C39|I Chain I, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754596|pdb|2C39|K Chain K, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754598|pdb|2C39|M Chain M, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754600|pdb|2C39|O Chain O, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754602|pdb|2C39|Q Chain Q, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754604|pdb|2C39|S Chain S, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754606|pdb|2C39|U Chain U, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|83754608|pdb|2C39|W Chain W, Rnase Ph Core Of The Archaeal Exosome In Complex With Adp
gi|313507220|pdb|2C38|C Chain C, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|313507221|pdb|2C38|W Chain W, Rnase Ph Core Of The Archaeal Exosome In Complex With A5
Rna
gi|6015744|emb|CAB57571.1| conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|13813902|gb|AAK41030.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602404|gb|ACX92007.1| 3' exoribonuclease [Sulfolobus solfataricus 98/2]
Length = 275
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA + P PN+G L +N EL P+A FE G + ++ + R +++ ++SK
Sbjct: 63 VLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L + + VW V +D+ VL+Y GN+L C++A++AAL + + V + I +
Sbjct: 123 ALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISV 182
Query: 576 HSAAEKDPIPMTILHYP-VTISYA 598
+ +P L+YP VTIS A
Sbjct: 183 NKNEVVGKLP---LNYPVVTISVA 203
>gi|289595859|ref|YP_003482555.1| 3' exoribonuclease [Aciduliprofundum boonei T469]
gi|289533646|gb|ADD07993.1| 3' exoribonuclease [Aciduliprofundum boonei T469]
Length = 270
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL V P PN G+L NAEL+P+ASP FE G + ++ + R +++ +E
Sbjct: 61 TRVLVGVKIEPGTPFPDTPNMGILTTNAELAPLASPTFEPGPPGEEAIELARVVDRGIRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
IDLE L + EKVW V +D++VL+YDGNL ALAAL + P
Sbjct: 121 GHAIDLEKLVIEEGEKVWIVFIDIHVLDYDGNLFDAAGYGALAALTNATVPASR------ 174
Query: 574 IIHSAAEKDPIPMTILHYPVTISYA 598
+ E +P + HYPV +++A
Sbjct: 175 --YDLGEDFKLP--VQHYPVPVTFA 195
>gi|254168333|ref|ZP_04875178.1| 3' exoribonuclease family, domain 1 protein [Aciduliprofundum
boonei T469]
gi|197622614|gb|EDY35184.1| 3' exoribonuclease family, domain 1 protein [Aciduliprofundum
boonei T469]
Length = 226
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL V P PN G+L NAEL+P+ASP FE G + ++ + R +++ +E
Sbjct: 61 TRVLVGVKIEPGTPFPDTPNMGILTTNAELAPLASPTFEPGPPGEEAIELARVVDRGIRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLL 547
IDLE L + EKVW V +D++VL+YDGNL
Sbjct: 121 GHAIDLEKLVIEEGEKVWIVFIDIHVLDYDGNLF 154
>gi|118601810|ref|NP_001073074.1| exosome complex component RRP43 [Bos taurus]
gi|122135904|sp|Q2KHU3.1|EXOS8_BOVIN RecName: Full=Exosome complex component RRP43; AltName:
Full=Exosome component 8; AltName: Full=Ribosomal
RNA-processing protein 43
gi|86826533|gb|AAI12882.1| Exosome component 8 [Bos taurus]
gi|296481825|tpg|DAA23940.1| TPA: exosome complex exonuclease RRP43 [Bos taurus]
Length = 276
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SI +G A+ + + V+ + P P
Sbjct: 17 FLKENCRPDGRELGEFRTTTVNVGSIGTADGSALV--KLGNTTVICGIKAEFGAPPTDAP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
++G + N +LSP+ S +F +G + + + ++F+ + S+ I E LC+ + + W
Sbjct: 75 DKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ DL LN+DGN+L C+ A LAAL + + P+VT + + +K + I +P
Sbjct: 135 LYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSC-LNIRTHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VATSFAVFD 202
>gi|332023404|gb|EGI63647.1| Exosome complex exonuclease RRP43 [Acromyrmex echinatior]
Length = 278
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N +SI + A++ + + + + + PKA P+ G + N ELSP+ S +F
Sbjct: 32 SVNVSSIVQADSSAIF--KLGDTTAVCGIKAELAAPKADTPDHGYIVPNVELSPLCSSKF 89
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G ++ + ++++F++ S +DL+ LC+ + VW + D+ LNY+G+++ C+
Sbjct: 90 RPGPPSEQAQVLSKFIDIILSNSAALDLKDLCICKSKLVWVLYCDILCLNYNGSVIDACT 149
Query: 552 IAALAALAHFRHPDVTSTGDQ--IIIHSAAEKDPIPMTILHYPVTISYAVF 600
A +AAL P+V T + I++ K I T+ P++ S+AVF
Sbjct: 150 GALMAALKTLTLPEVNYTKETALTIVNPKNRKKFIVRTL---PISTSFAVF 197
>gi|395329798|gb|EJF62183.1| ribosomal protein S5 domain 2-like protein [Dichomitus squalens
LYAD-421 SS1]
Length = 291
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 423 DWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAE 482
+W D+ S N SIS +G A+ + + V+ V + P+ +P +G L N +
Sbjct: 51 EWRDI----SVNVGSISTADGSALV--RLGSTTVVCGVKAEIAEPELDKPKDGFLVPNLD 104
Query: 483 LSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNY 542
L + SP+F+ G TD + +I+ L S + SLC+ + W + VD +NY
Sbjct: 105 LPAICSPKFKPGPPTDEAQVISDRLNDVLISSGVVSTSSLCIEPSKSAWVLYVDATCINY 164
Query: 543 DGNLLGCCSIAALAALAHFRHPDVTSTGD-QIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
DGN +A +AAL + R P D Q I S K+ P+ I PV+ S+ +F+
Sbjct: 165 DGNAFDATLLAMVAALKNTRLPKARYDEDRQQTICSRKVKE--PLQIGRLPVSFSFGIFD 222
Query: 602 GGSEGSTVPGFTECIQLDTALALSQD 627
G + F E + LDT++++ D
Sbjct: 223 GAYILADPTSFEEPL-LDTSVSVVVD 247
>gi|410671928|ref|YP_006924299.1| 3' exoribonuclease [Methanolobus psychrophilus R15]
gi|409171056|gb|AFV24931.1| 3' exoribonuclease [Methanolobus psychrophilus R15]
Length = 255
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 450 WVK--PSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFL 507
WVK +EVL V P EG++ + EL+P+ASP+FE G + ++ + R
Sbjct: 45 WVKYGETEVLVGVKVQAGAPFPDSAGEGVIITSLELNPLASPEFEAGPPKEGAIEMARVT 104
Query: 508 EKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
++ +ES IDL LC+ E+VW + +D++VLN GN+ S+ A+AAL P
Sbjct: 105 DRGIRESGAIDLSKLCITKGEEVWIIFIDIHVLNDAGNIQDASSLGAIAALMTTTIP 161
>gi|255513310|gb|EET89576.1| 3' exoribonuclease [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 258
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Query: 413 HFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
KE KR +DF + + ++ E + ++VLA V P
Sbjct: 14 ELAKEGKREDSRGSMDFRDLKISRGV-IDHAEGSAQADLGATKVLAGVKLVQEDVYEDTP 72
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
++G L ++AEL P+A+ ++ETG + ++ + R +++ + CIDL+SL ++ E K W
Sbjct: 73 DQGNLVVSAELLPLAAAEYETGPPSPEAIELGRVVDRAIRAGNCIDLKSL-LLEEGKAWT 131
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
V VD+ VLN+DGNL IAA++A+ R P+
Sbjct: 132 VYVDVYVLNFDGNLFDASVIAAMSAILDARVPE 164
>gi|124514000|ref|XP_001350356.1| exosome complex exonuclease, putative [Plasmodium falciparum 3D7]
gi|23615773|emb|CAD52765.1| exosome complex exonuclease, putative [Plasmodium falciparum 3D7]
Length = 477
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 413 HFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
HFWK K+ F S N ++ V + ++V+ +++ +V P +
Sbjct: 10 HFWKNIKKNIRLDGRTFEDSRNVCINFLKDYGHVEIS-IGFTKVICKITSEIVKPHDRKL 68
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
EG+L IN ++ + +D + I +++ K S I+ ESLC++ +KVW
Sbjct: 69 KEGILKINLDIDNFIEDNENSDNMSDECLEIKNIIDRVLKTSNIINFESLCIIPGKKVWC 128
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ +++ V+ DGNL C ++A L HF++ V + II E + P++IL+ P
Sbjct: 129 ICINIMVIENDGNLTDACYLSAYCGLVHFKNHQVRVIKNGDIIIDKEEINYSPLSILNSP 188
Query: 593 VTISYAVF 600
+ ++A +
Sbjct: 189 IVTTFAYY 196
>gi|389852856|ref|YP_006355090.1| exosome complex RNA-binding protein Rrp42 [Pyrococcus sp. ST04]
gi|388250162|gb|AFK23015.1| putative exosome complex RNA-binding protein Rrp42 [Pyrococcus sp.
ST04]
Length = 266
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Query: 410 QTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKA 469
+ KE KR D D+ E + E E + ++VL + + P
Sbjct: 4 HIINLLKEGKRIDDRGFEDYRPIEIEVGL-IEKAEGSALVKLGSTQVLVGIKTTLGEPFP 62
Query: 470 TRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK 529
PN G++ N EL P+ASP FE G + ++ + R +++ +ES+ ++LE + +V +
Sbjct: 63 DTPNMGVMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESRALNLEKMVIVPGKI 122
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTIL 589
V V +D++VL++DGNL+ IAA+AAL + R P V + + EK+P+P+ +
Sbjct: 123 VRVVFIDVHVLDHDGNLMDAIGIAAIAALMNARVPKVRYNEETEEVEILEEKEPLPVEKI 182
Query: 590 HYPVTIS 596
PVT +
Sbjct: 183 PVPVTFA 189
>gi|254169471|ref|ZP_04876288.1| 3' exoribonuclease family, domain 2 [Aciduliprofundum boonei T469]
gi|197621577|gb|EDY34175.1| 3' exoribonuclease family, domain 2 [Aciduliprofundum boonei T469]
Length = 210
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL V P PN G+L NAEL+P+ASP FE G + ++ + R +++ +E
Sbjct: 1 TRVLVGVKIEPGTPFPDTPNMGILTTNAELAPLASPTFEPGPPGEEAIELARVVDRGIRE 60
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLL 547
IDLE L + EKVW V +D++VL+YDGNL
Sbjct: 61 GHAIDLEKLVIEEGEKVWIVFIDIHVLDYDGNLF 94
>gi|409096212|ref|ZP_11216236.1| exosome complex RNA-binding protein Rrp42 [Thermococcus zilligii
AN1]
Length = 276
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 11/221 (4%)
Query: 410 QTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKA 469
+ K+ KR D+ + E T + E E + + VL V P
Sbjct: 14 RILSLLKDGKRLDGRGLEDYRNIEIRTGL-IEKAEGSALVKLGDTMVLVGVKVEFGEPFP 72
Query: 470 TRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK 529
P G++ N EL P+ASP FE G + +V + R +++ +ES IDL+ L +V +
Sbjct: 73 DLPERGVMTTNVELVPLASPTFEPGPPDERAVELARIVDRGIRESNAIDLDKLVIVPGKL 132
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV---TSTGDQIIIHSAAEKDPIPM 586
V+ + +D++VL++DGNL+ +AA+AAL + P V TG+ I ++ E +P+P+
Sbjct: 133 VYVLFIDVHVLDHDGNLIDAAGLAAMAALMTTKIPRVQYNAETGELIKLN---ELEPLPV 189
Query: 587 TILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQD 627
H PV +++A GS P E +D+ L ++ D
Sbjct: 190 N--HVPVPVTFAKI--GSSLVVDPSLEEETVMDSRLTITTD 226
>gi|254168306|ref|ZP_04875152.1| 3' exoribonuclease family, domain 2 [Aciduliprofundum boonei T469]
gi|197622815|gb|EDY35384.1| 3' exoribonuclease family, domain 2 [Aciduliprofundum boonei T469]
Length = 270
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL V P PN G+L NAEL+P+ASP FE G + ++ + R +++ +E
Sbjct: 61 TRVLVGVKIEPGTPFPDTPNMGILTTNAELAPLASPTFEPGPPGEEAIELARVVDRGIRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLL 547
IDLE L + EKVW V +D++VL+YDGNL
Sbjct: 121 GHAIDLEKLVIEEGEKVWIVFIDIHVLDYDGNLF 154
>gi|145521242|ref|XP_001446476.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413954|emb|CAK79079.1| unnamed protein product [Paramecium tetraurelia]
Length = 984
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 457 LAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKC 516
L + S + + P RP+EG L + +L + + + I +++EK K SK
Sbjct: 813 LGETSVSRMSPNPIRPSEGFLKFHLDLQVLRDTGY-MHNPIKLDMEIEKYIEKVIKGSKA 871
Query: 517 IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIH 576
+D ESLC+++ + VW++ V++ ++N DGNLL + + + HFR P V+ + + +
Sbjct: 872 LDTESLCILSGKNVWSIDVNVALINNDGNLLDAMYLCCIFSQQHFRRPQVSVSLQGVKVE 931
Query: 577 SAAEKDPIPMTILHYPVTISYAVF 600
EK +P++I H P++++ A+
Sbjct: 932 --VEKRLVPLSIHHIPLSLTQAIL 953
>gi|323509319|dbj|BAJ77552.1| cgd7_2380 [Cryptosporidium parvum]
Length = 408
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMA-SPQFETGRQTDTSV--MINRFLEKC 510
+ VL+ V +V P R +EG + ++ P++ +P R T++ I ++E+
Sbjct: 44 THVLSVVKSELVAPSQERSSEGFISFTVDIGPLSINPTSHAFRHNRTTLGTEIANYIERI 103
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP--DVTS 568
KE+ ID E LC+++ VW+V+ +++VL DGNL C +A L+ L H+R+ DV S
Sbjct: 104 LKETGAIDTEILCILSGVCVWSVKCEIHVLFDDGNLFDACLMATLSGLKHYRYNEIDVDS 163
Query: 569 TGDQIIIHSAAEKD------------PIPMTILHYPVTISYAVFNG 602
+ E+D IP + H+P++IS NG
Sbjct: 164 FLKKSKCEGFGERDYQRLENTIRKLEMIPFNVHHFPLSISIGYING 209
>gi|91081401|ref|XP_972667.1| PREDICTED: similar to exosome component 8 [Tribolium castaneum]
gi|270006123|gb|EFA02571.1| hypothetical protein TcasGA2_TC008282 [Tribolium castaneum]
Length = 271
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SIS +G A+ V + V+ + + PKA NEG L N EL P+ S +F
Sbjct: 38 NLGSISTADGSAIA--KVGRTTVVCGIKAELCQPKAEAANEGFLIPNVELPPLCSSKFRP 95
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G T+ + + + + K S C+DL++LC+ ++ W + DL L+ DG L+ C +A
Sbjct: 96 GPPTEQAQVATQLVADILKNSDCLDLKTLCIFPDKLAWCLYADLICLDLDGALIDACVVA 155
Query: 554 ALAALAHFRHPDV 566
+AAL P V
Sbjct: 156 LMAALKSVTLPAV 168
>gi|67609743|ref|XP_667059.1| polymyositis/scleroderma autoantigen 1 [Cryptosporidium hominis
TU502]
gi|54658150|gb|EAL36827.1| polymyositis/scleroderma autoantigen 1 [Cryptosporidium hominis]
Length = 408
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMA-SPQFETGRQTDTSV--MINRFLEKC 510
+ VL+ V +V P R +EG + ++ P++ +P R T++ I ++E+
Sbjct: 44 THVLSVVKSELVAPSQERSSEGFISFTVDIGPLSINPTSHAFRHNRTTLGTEIANYIERT 103
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP--DVTS 568
KE+ ID E LC+++ VW+V+ +++VL DGNL C +A L+ L H+R+ DV S
Sbjct: 104 LKETGAIDTEILCILSGVCVWSVKCEIHVLFDDGNLFDACLMATLSGLKHYRYNEIDVDS 163
Query: 569 TGDQIIIHSAAEKD------------PIPMTILHYPVTISYAVFNG 602
+ E+D IP + H+P++IS NG
Sbjct: 164 FLKKSKCEGLEERDYQRLENTIRKLEMIPFNVHHFPLSISIGYING 209
>gi|66362890|ref|XP_628411.1| RRP45-like archaeo-eukaryotic exosomal rnase, PH domain
[Cryptosporidium parvum Iowa II]
gi|46229803|gb|EAK90621.1| RRP45-like archaeo-eukaryotic exosomal rnase, PH domain
[Cryptosporidium parvum Iowa II]
Length = 432
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMA-SPQFETGRQTDTSV--MINRFLEKC 510
+ VL+ V +V P R +EG + ++ P++ +P R T++ I ++E+
Sbjct: 68 THVLSVVKSELVAPSQERSSEGFISFTVDIGPLSINPTSHAFRHNRTTLGTEIANYIERI 127
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP--DVTS 568
KE+ ID E LC+++ VW+V+ +++VL DGNL C +A L+ L H+R+ DV S
Sbjct: 128 LKETGAIDTEILCILSGVCVWSVKCEIHVLFDDGNLFDACLMATLSGLKHYRYNEIDVDS 187
Query: 569 TGDQIIIHSAAEKD------------PIPMTILHYPVTISYAVFNG 602
+ E+D IP + H+P++IS NG
Sbjct: 188 FLKKSKCEGFGERDYQRLENTIRKLEMIPFNVHHFPLSISIGYING 233
>gi|149064770|gb|EDM14921.1| exosome component 8 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 276
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPVDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + N +L P+ S +F TG + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVIENSQIIKKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRAN 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|294868324|ref|XP_002765481.1| exosome complex exonuclease rrp45, putative [Perkinsus marinus ATCC
50983]
gi|239865524|gb|EEQ98198.1| exosome complex exonuclease rrp45, putative [Perkinsus marinus ATCC
50983]
Length = 349
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQ-FETGR--------QTDTSVMIN 504
+ + A V+ + P + RP EG L IN E PMA+P +G QT + +
Sbjct: 19 TRIRAVVTGQLTSPPSNRPREGRLSINVEAGPMAAPAVLPSGNSSGLVGSAQTPEGISLC 78
Query: 505 RFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
LE+ K S +D+E+LC+ + VW +R+D++VL+ +GN+ +IA++ AL H+R
Sbjct: 79 NQLERMLKGSNAVDVEALCIQSGSLVWELRLDVHVLSDNGNVGDAAAIASIVALRHYRRA 138
Query: 565 DVTSTGDQII 574
+V+ +II
Sbjct: 139 EVSVVNGEII 148
>gi|380026683|ref|XP_003697074.1| PREDICTED: exosome complex component RRP43-like [Apis florea]
Length = 281
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N +SI+ + A++ + + ++ + + +PKA P G + N EL P+ SP+F
Sbjct: 36 SVNISSITHADSSAIF--KIGNTTIVCGIKSELAVPKAESPECGYIVPNIELPPLCSPKF 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G +D + +I + +E + S IDL+ LCV + VW + DL +NYDG+++ C
Sbjct: 94 RPGPPSDQAQVITKLIENILRNSAAIDLKELCVYKGKLVWVLYCDLVCINYDGSIIDACI 153
Query: 552 IAALAALAHFRHPDV---TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
A A L P++ TG I + K PI PV+I++A+F+
Sbjct: 154 GALTATLNTLTLPEIFYNIETGHVSINSTKRIKFPIKA----LPVSITFAIFD 202
>gi|299689088|pdb|3L7Z|A Chain A, Crystal Structure Of The S. Solfataricus Archaeal Exosome
gi|299689091|pdb|3L7Z|D Chain D, Crystal Structure Of The S. Solfataricus Archaeal Exosome
gi|299689094|pdb|3L7Z|G Chain G, Crystal Structure Of The S. Solfataricus Archaeal Exosome
Length = 271
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 8/144 (5%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA + P PN+G L +N EL P+A FE G + ++ + R +++ ++SK
Sbjct: 63 VLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYTTFEPGPPDENAIELARVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L + + VW V +D+ VL+Y GN+L C++A++AAL + + V +QI +
Sbjct: 123 ALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKV----EQISV 178
Query: 576 HSAAEKDPIPMTILHYP-VTISYA 598
+ +P L+YP VTIS A
Sbjct: 179 NKNEVVGKLP---LNYPVVTISVA 199
>gi|226505384|ref|NP_001141790.1| uncharacterized protein LOC100273926 [Zea mays]
gi|194705926|gb|ACF87047.1| unknown [Zea mays]
gi|414868037|tpg|DAA46594.1| TPA: hypothetical protein ZEAMMB73_803115 [Zea mays]
Length = 407
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 53/270 (19%)
Query: 74 YWTDLFVRYFLFQTDSN-IDCDDLLFFVRKKYIKTSSRN-----LPKFETEVEVFRKDSR 127
+W ++ +F+ S + DDL+FFV + N P F V +
Sbjct: 67 FWHEMLDLFFVRGRQSKRSEEDDLVFFVNNMKLHGYGFNDNMEDPPPFF--VRRWAPTLE 124
Query: 128 KLPIGDPDVDWEETVYLNMIIHQFDYTLTLAIC-------TRTSPKHLQVLKRHSQKVYA 180
K+ I +VDWE + YLN+I H YT+T+AI K L + + ++ VYA
Sbjct: 125 KISINTVEVDWERSFYLNLIAHT-SYTVTVAIFGIEDLRNRAVKNKQLPPVYKVTKNVYA 183
Query: 181 SPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRA--- 233
SPSR +D + VE + YP + F+VD+F++ F +++ D E CV L A D A
Sbjct: 184 SPSRVNFHLDRRKAVETLPAYPNIFFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFP 243
Query: 234 ------------------GSV-----KSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSF 270
GS K +F + Y ++ YDA S KF +S
Sbjct: 244 EESECKNPVSNTQPGMSCGSAQEKPPKRTLFSAYVGYQNVRGAYDACRS---KFGSFLSL 300
Query: 271 GIFSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
G + +++++ + MKGP+G+G E+AV+
Sbjct: 301 G----HDHNKLDRLFMKGPEGRGEVEVAVS 326
>gi|45595709|gb|AAH67250.1| Exosc8 protein, partial [Mus musculus]
Length = 270
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 10 RFLKENCRPDGRELGEFRATTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPVDA 67
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + N +L P+ S +F TG + + + ++F+ S+ I E LC+ + W
Sbjct: 68 PDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAW 127
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + +
Sbjct: 128 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRTN 186
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 187 PVATSFAVFD 196
>gi|356510612|ref|XP_003524031.1| PREDICTED: uncharacterized protein LOC100796388 [Glycine max]
Length = 400
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 59/278 (21%)
Query: 74 YWTDLFVRYFLFQTDS-NIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-I 131
+W D+F YF+ +S DDL+FFVRK S N + R+ + KL +
Sbjct: 44 FWHDVFDLYFVCGKESRGRQDDDLVFFVRKLGSHGSGSNNKTESVDPYFVRRWAPKLSNL 103
Query: 132 GDP---DVDWEETVYLNMIIHQFDYTLTLAICTRT----------SPKH----LQVLKRH 174
D DV+W + YLN+I H +++T+AIC+ +P L + +
Sbjct: 104 VDETSIDVNWRRSFYLNLIAHT-SFSVTVAICSHQDLLNHRAGQDTPAGQDTPLSPIYKV 162
Query: 175 SQKVYASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVAS 230
+ VYASPSR ++D++ +E YP +CF +D+F+ F +++ + + CV L A
Sbjct: 163 VKTVYASPSRVNFQLDSEKAMETTPAYPDICFAIDDFDSTFDAVVLTEKDHCYCVVLNAH 222
Query: 231 DRAG----------------------------SVKSVIFLGSIRYDALKRVYDARTSVSN 262
D A + K + G + Y ++ YDA S
Sbjct: 223 DGAAFPSEKVANDCSTSDSSSLPVHSSSAKKRNTKLTLLSGFVSYQMVRDAYDAGRS--- 279
Query: 263 KFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
+F +S G +S+ + + + MKGP G+G E+AV+
Sbjct: 280 RFGSLLSVG----HSSGKTDRIYMKGPGGRGEVEVAVS 313
>gi|354499904|ref|XP_003512044.1| PREDICTED: exosome complex component RRP43-like, partial
[Cricetulus griseus]
Length = 284
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SIS +G A+ + + V+ + P P
Sbjct: 25 FLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPLDAP 82
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
+ G + N +L P+ S +F TG + + + ++F+ + S+ I E LC+ + W
Sbjct: 83 DRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVLENSQIIKKEDLCISPGKLAWV 142
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + + P
Sbjct: 143 LYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRTNP 201
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 202 VATSFAVFD 210
>gi|254692991|ref|NP_081424.3| exosome complex component RRP43 isoform 2 [Mus musculus]
gi|21759414|sp|Q9D753.1|EXOS8_MOUSE RecName: Full=Exosome complex component RRP43; AltName:
Full=Exosome component 8; AltName: Full=Ribosomal
RNA-processing protein 43
gi|22208743|emb|CAD43467.1| CBP-interacting protein 3 [Mus musculus]
gi|148703329|gb|EDL35276.1| exosome component 8, isoform CRA_d [Mus musculus]
Length = 276
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRATTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPVDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + N +L P+ S +F TG + + + ++F+ S+ I E LC+ + W
Sbjct: 74 PDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRTN 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|148703331|gb|EDL35278.1| exosome component 8, isoform CRA_f [Mus musculus]
Length = 283
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 23 RFLKENCRPDGRELGEFRATTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPVDA 80
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + N +L P+ S +F TG + + + ++F+ S+ I E LC+ + W
Sbjct: 81 PDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAW 140
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + +
Sbjct: 141 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRTN 199
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 200 PVATSFAVFD 209
>gi|296243059|ref|YP_003650546.1| ribosomal RNA-processing protein RRP42 [Thermosphaera aggregans DSM
11486]
gi|296095643|gb|ADG91594.1| ribosomal RNA-processing protein RRP42 [Thermosphaera aggregans DSM
11486]
Length = 289
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ V + P A RP+EG+L ++AE P+AS FE G + S+ + R +++ +E
Sbjct: 61 TQVITGVKIELGEPFADRPDEGVLQVHAEFVPLASQTFEPGPPDENSIEVARVVDRSLRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
K ID + L V +KVW V D+ ++++ GN++ ++++ ALA + P +
Sbjct: 121 PKAIDFKQLVVAPGKKVWVVFNDIYLIDHGGNIMDASMLSSMLALATAKIPYYEEKEPGV 180
Query: 574 -IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV--PGFTECIQLDTALALSQDR-- 628
++ + P+P+ L VT+ G E + P E + L+T L ++ D
Sbjct: 181 YVVDNKRHTSPLPVNTLVATVTM------GIHEDVIIVDPSIEEEVVLNTFLTIAVDEKG 234
Query: 629 -----QKLGVDSAYANLVNKTDRILLDEG 652
QK G+ ++++ I L++G
Sbjct: 235 RVCGIQKKGIAGLSKKMLDQAVEIALNKG 263
>gi|168023135|ref|XP_001764094.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684833|gb|EDQ71233.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 47/280 (16%)
Query: 74 YWTDL----FVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFE-TEVEVF--RKDS 126
+W +L FVR + + + D DDL+FFVR + S + + V+ F R+ +
Sbjct: 23 FWCELLDLFFVRGIVDREEEKAD-DDLVFFVRLQSSPYSDSYPSESDDPSVQPFFVRRWA 81
Query: 127 RKLP--IGDP--DVDWEETVYLNMIIHQFDYTLTLAICT--------RTSPKHLQVLKRH 174
+L IG VDW + YLN+I H +++LT+AIC + S L + +
Sbjct: 82 PELVKVIGSTTGQVDWPRSFYLNLICHT-EFSLTVAICRLEGLQNRDKDSNAPLAPIYKV 140
Query: 175 SQKVYASPSRRRM--DTKGEVEEM--TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVA 229
+ +VYASPSR D + + E YP VCF VD+++ F D+++ D + CV L A
Sbjct: 141 TNRVYASPSRANFQSDFRSKAVETVPAYPNVCFVVDDYDNTFEDVILTDPDHCYCVLLNA 200
Query: 230 SDRA-----------GSV---KSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSN 275
A GS+ K +F G + Y+ ++ ++ Q++S
Sbjct: 201 RGGAALPPEDTDILNGSLVLFKVTLFSGFVSYEMVRNAFEGGKMRLGGLLQQIS------ 254
Query: 276 NSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
+ + E + M+GP G+G ++AV+ G + S PG
Sbjct: 255 -GSGKSERLIMRGPGGRGALDVAVSSASDQGQPSSPSTPG 293
>gi|48477465|ref|YP_023171.1| exosome complex RNA-binding protein Rrp42 [Picrophilus torridus DSM
9790]
gi|48430113|gb|AAT42978.1| ribonuclease PH [Picrophilus torridus DSM 9790]
Length = 260
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 65/105 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V P P++G++ +N E+ PMA P FE G + ++ +R +++ +E
Sbjct: 59 TKVVAGVKIEEGEPFPDTPDQGVMALNIEMLPMAFPTFEAGPPGEEAIEYSRVVDRGIRE 118
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
SK ID+ L + KVW V +D++++NY GN++ +IAA+AAL
Sbjct: 119 SKMIDVTRLVIEPGTKVWMVFIDIDIINYAGNIIDASTIAAVAAL 163
>gi|294948902|ref|XP_002785952.1| Exosome complex exonuclease RRP45, putative [Perkinsus marinus ATCC
50983]
gi|239900060|gb|EER17748.1| Exosome complex exonuclease RRP45, putative [Perkinsus marinus ATCC
50983]
Length = 350
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 450 WVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMAS----PQFETG-----RQTDTS 500
WV+ A V+ ++ P RPNEG LF++ + + S P ++ QT +
Sbjct: 61 WVR-----AVVTGEVITPPPERPNEGKLFVSVDYGAVVSSATLPSGDSAGLPGTAQTPEA 115
Query: 501 VMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAH 560
V + LE+ K SK +D+E+LC+ +VW+VR+D++V GN+ + A++AAL H
Sbjct: 116 VSLCNQLERMLKGSKAVDVEALCIAGGSRVWSVRLDVHVFTDAGNVGDAAATASVAALMH 175
Query: 561 FRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+R +VT+ ++ E +P+P++I H P+ +++ +
Sbjct: 176 YRRSEVTTMEGSTVVRE--ELEPMPLSIHHMPLPLTFTLVK 214
>gi|37589850|gb|AAH59089.1| Exosome component 8 [Mus musculus]
Length = 276
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRATTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPVDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + N +L P+ S +F TG + + + ++F+ S+ I E LC+ + W
Sbjct: 74 PDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + +
Sbjct: 134 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRTN 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVAASFAVFD 202
>gi|294952965|ref|XP_002787536.1| Exosome complex exonuclease RRP45, putative [Perkinsus marinus ATCC
50983]
gi|239902542|gb|EER19332.1| Exosome complex exonuclease RRP45, putative [Perkinsus marinus ATCC
50983]
Length = 350
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 450 WVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMAS----PQFETG-----RQTDTS 500
WV+ A V+ ++ P RPNEG LF++ + + S P ++ QT +
Sbjct: 61 WVR-----AVVTGEVITPPPERPNEGKLFVSVDYGAVVSSATLPSGDSAGLPGTAQTPEA 115
Query: 501 VMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAH 560
V + LE+ K SK +D+E+LC+ +VW+VR+D++V GN+ + A++AAL H
Sbjct: 116 VSLCNQLERMLKGSKAVDVEALCIAGGSRVWSVRLDVHVFTDAGNVGDAAATASVAALMH 175
Query: 561 FRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+R +VT+ ++ E +P+P++I H P+ +++ +
Sbjct: 176 YRRSEVTTMEGSTVVRE--ELEPMPLSIHHMPLPLTFTLVK 214
>gi|124027457|ref|YP_001012777.1| exosome complex RNA-binding protein Rrp42 [Hyperthermus butylicus
DSM 5456]
gi|123978151|gb|ABM80432.1| RNase PH-related exoribonuclease [Hyperthermus butylicus DSM 5456]
Length = 328
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA V ++V P PNE +L ++AE P+ASP FE G + ++ + R +++ +E K
Sbjct: 63 VLAGVKTDIVAPFPDTPNEAVLVVHAEFVPLASPTFEPGPPDENAIELARVIDRSLREIK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+ L+ L + + VW + VDL +LN+DGNL +AA+AAL R P T D +
Sbjct: 123 AVALDKLVLEPGKHVWRLYVDLYILNHDGNLFDASMLAAMAALMTTRLPAAVKTEDGYTV 182
Query: 576 HSAAEKDPIPMTILHYPVTISYA 598
+ +P+ H VT++ A
Sbjct: 183 DRSKFTGLVPVN--HKVVTVTIA 203
>gi|431903093|gb|ELK09269.1| Exosome complex exonuclease RRP43 [Pteropus alecto]
Length = 281
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 431 SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQ 490
++ N SIS +G A+ + + V+ + P P++G + N +L P+ S +
Sbjct: 41 TTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPTDAPDKGYVVPNVDLPPLCSSR 98
Query: 491 FETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCC 550
F +G + + + ++F+ + S+ I E LC+ + W + DL L+YDGN+L C
Sbjct: 99 FRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAWVLYCDLICLDYDGNILDAC 158
Query: 551 SIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ A LAAL + + P+VT + + +K + I +PV S+AVF+
Sbjct: 159 TFALLAALKNVQLPEVTINEETALAEVNLKKKSC-LNIRTHPVATSFAVFD 208
>gi|237843665|ref|XP_002371130.1| exosome complex exonuclease, putative [Toxoplasma gondii ME49]
gi|211968794|gb|EEB03990.1| exosome complex exonuclease, putative [Toxoplasma gondii ME49]
Length = 447
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%)
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G+ ++ + R L + K+S+ +D E+LC+ + + W+V V + VL DGNL +A
Sbjct: 112 GKSSELERELERMLRRLLKDSRVVDTEALCIQSGKWAWHVLVAVTVLEDDGNLRDAALLA 171
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
AL L HF+ VT G+ ++H+AA+++P+P+ I H PV +S+A
Sbjct: 172 ALCGLMHFKKEAVTVDGETAVLHAAADREPLPLCIHHLPVLVSFAFL 218
>gi|344281856|ref|XP_003412693.1| PREDICTED: exosome complex component RRP43-like [Loxodonta
africana]
Length = 282
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ + P
Sbjct: 22 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPTDA 79
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 80 PDKGYIVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISQGKLAW 139
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L + A LAAL + + P+V + ++ + K + I +Y
Sbjct: 140 VLYCDLICLDYDGNILDASTFALLAALKNVQLPEV-NINEETALAEVNLKKKTHLNIRNY 198
Query: 592 PVTISYAVFN 601
PV S+A+F+
Sbjct: 199 PVATSFAIFD 208
>gi|50838810|ref|NP_001002865.1| exosome complex exonuclease RRP43 [Danio rerio]
gi|49618917|gb|AAT68043.1| Opa-interacting protein 2 [Danio rerio]
Length = 277
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SIS +G A+ + + V+ + + +P +
Sbjct: 17 FLKENCRPDGRELGEFRPTTLNINSISTADGSALV--KIGNTTVICGIKAELAVPPSEAQ 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G L N +L P+ S +F G + + ++F+ + S I+LE LC+ + W
Sbjct: 75 NKGYLVPNVDLPPLCSSRFRAGPPGEQAQAASQFIADVIESSDLINLEELCIEKAKLCWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ D+ L+YDGNLL C LAAL + P+VT + + EK + I +P
Sbjct: 135 LYCDIMCLDYDGNLLDACITVLLAALKTAQLPEVTINKETDLAEVDIEKKR-RLKINRHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VGSSFAVFD 202
>gi|355700935|gb|EHH28956.1| Exosome complex exonuclease RRP43, partial [Macaca mulatta]
Length = 272
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 431 SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQ 490
++ N SIS +G A+ + + V+ V P P++G + N +L P+ S +
Sbjct: 31 TTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDAPDKGYVVPNVDLPPLCSSR 88
Query: 491 FETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCC 550
F G + + + ++F+ + S+ I E LC+ + W + DL L+YDGN+L C
Sbjct: 89 FRAGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAWVLYCDLICLDYDGNILDAC 148
Query: 551 SIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ A LAAL + + P+VT + + +K + I +PV S+AVF+
Sbjct: 149 TFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTHPVATSFAVFD 198
>gi|66267273|gb|AAH95236.1| Exosome component 8 [Danio rerio]
Length = 277
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SIS +G A+ + + V+ + + +P +
Sbjct: 17 FLKENCRPDGRELGEFRPTTLNINSISTADGSALV--KIGNTTVICGIKAELAVPPSEAQ 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G L N +L P+ S +F G + + ++F+ + S I+LE LC+ + W
Sbjct: 75 NKGYLVPNVDLPPLCSSRFRAGPPGEQAQAASQFIADVIESSDLINLEELCIEKAKLCWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ D+ L+YDGNLL C LAAL + P+VT + + EK + I +P
Sbjct: 135 LYCDIMCLDYDGNLLDACITVLLAALKTAQLPEVTINKETDLAEVDIEKKR-RLKINRHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VGSSFAVFD 202
>gi|66529825|ref|XP_624000.1| PREDICTED: exosome complex exonuclease RRP43-like [Apis mellifera]
Length = 281
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N +SI+ + A++ + + ++ + + +PKA P G + N EL P+ SP+F
Sbjct: 36 SVNISSITHADSSAIF--KIGNTTIVCGIKSELAVPKAESPECGYIVPNIELPPLCSPKF 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G +D + +I + +E + S IDL+ LCV + VW + DL +NYDG+++ C
Sbjct: 94 RPGPPSDQAQVITKLVENILRNSAAIDLKELCVYKGKLVWVLYCDLVCINYDGSIIDACI 153
Query: 552 IAALAALAHFRHPDV---TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
A A L P++ TG + I+S I I PV+I++A+F+
Sbjct: 154 GALTATLNTLTLPEIFYNVETG-HVSINSTKR---IRFPIKALPVSITFAIFD 202
>gi|60359866|dbj|BAD90152.1| mKIAA4013 protein [Mus musculus]
Length = 308
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 48 RFLKENCRPDGRELGEFRATTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPVDA 105
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + N +L P+ S +F TG + + + ++F+ S+ I E LC+ + W
Sbjct: 106 PDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAW 165
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + +
Sbjct: 166 VLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRTN 224
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 225 PVATSFAVFD 234
>gi|327264085|ref|XP_003216847.1| PREDICTED: exosome complex exonuclease RRP43-like [Anolis
carolinensis]
Length = 277
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SI+ +G A+ + + V+ + P A
Sbjct: 18 RFLKENCRPDGRDLGEFRTTTINIGSITTADGSALV--KLGNTTVVCGIKAEFAAPLADS 75
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
N+G + N +L P+ S +F G + + ++F+ + S+ + E LC+V + W
Sbjct: 76 SNKGYIVPNVDLPPLCSSRFRPGPPGEEAQAASQFVADVIENSQVVMKEDLCIVDGKIAW 135
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ D+ L+YDGNLL C A LAAL + + P VT ++ + K+ IP+TI
Sbjct: 136 VLYCDIICLDYDGNLLDACMCAFLAALRNVQLPAVT-INEETGLAEVNLKEKIPLTIRKE 194
Query: 592 PVTISYAVFN 601
PV S+ +F+
Sbjct: 195 PVATSFILFD 204
>gi|301791884|ref|XP_002930910.1| PREDICTED: exosome complex exonuclease RRP43-like [Ailuropoda
melanoleuca]
Length = 276
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SIS +G A+ + + V+ + P P
Sbjct: 17 FLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPTDTP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 75 DKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLSWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ D+ L+YDGN+L C+ A LAAL + + P+VT + + +K + I +P
Sbjct: 135 LYCDIICLDYDGNILDACTFALLAALKNVQLPEVTINEETGLAEVHLKKKSY-LNIRTHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VATSFAVFD 202
>gi|432111599|gb|ELK34704.1| Exosome complex component RRP43 [Myotis davidii]
Length = 307
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N S+S +G A+ + + V+ + P
Sbjct: 48 RFLKENCRPDGRELGEFRTTTVNIGSVSTADGSALV--KLGNTAVICGIKAEFAAPPPDA 105
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 106 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIPKEDLCISPGKLSW 165
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 166 VLYCDLICLDYDGNILDACTCALLAALKNVQLPEVTINEETALAEVNLKKKRY-LNIRTH 224
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 225 PVATSFAVFD 234
>gi|255537988|ref|XP_002510059.1| cw7 protein, putative [Ricinus communis]
gi|223550760|gb|EEF52246.1| cw7 protein, putative [Ricinus communis]
Length = 399
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 52/271 (19%)
Query: 74 YWTDLFVRYFLFQTDS-NIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP-- 130
+W D+ YF+ +S DDL+FFV+K + N R+ + KL
Sbjct: 43 FWYDMLDLYFIRGRESRGRQDDDLVFFVKKMGTEGYGFNDNMQGVSPYFVRRWAPKLESL 102
Query: 131 IGD-PDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQV--------LKRHSQKVYAS 181
I D +VDW + YLN+I H +++T+AIC+ + ++ Q + + + VYAS
Sbjct: 103 ISDNSEVDWRRSFYLNLIAHT-SFSVTVAICSHQALRNHQAGPNTQLSPIYKVVKTVYAS 161
Query: 182 PSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVA-------- 229
SR +D+K +E YP +CF VD+F+ F +++ + + CV L A
Sbjct: 162 ASRVNFHLDSKKAIETTPAYPDICFAVDDFDSTFDAVVLTEKDHCYCVLLNAHGGAAFPC 221
Query: 230 --------------------SDRAGSVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMS 269
S + + K +F G + Y ++ YDA S +F +S
Sbjct: 222 ERESPDSSSNSVSPVEVDTSSGKTKNSKLTLFSGFVSYQMVREAYDAGKS---RFGSLLS 278
Query: 270 FGIFSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
G +S + + + MKGP G+G E+AV+
Sbjct: 279 LG----HSPGKTDKLYMKGPGGRGEVEVAVS 305
>gi|170290982|ref|YP_001737798.1| exosome complex RNA-binding protein Rrp42 [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175062|gb|ACB08115.1| 3' exoribonuclease [Candidatus Korarchaeum cryptofilum OPF8]
Length = 268
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Query: 434 NWTSISAENGEAVWCPWVKPSE--VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
N T AE GEA W+K E VL V ++ P P++G+ NAEL P+ASP F
Sbjct: 41 NGTFTKAE-GEA----WLKLGETQVLVGVKADLGEPFPDTPDKGVFVSNAELLPVASPTF 95
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
E G + ++ + R +++ + + IDL SL ++ + V+ + +D+ VL+YDGNL +
Sbjct: 96 EPGPPDEGAIELARVVDRAIRSADAIDLGSLVILPGKLVYMIFLDMYVLDYDGNLEDSLT 155
Query: 552 IAALAALAHFRHPDV 566
+A+L AL P+V
Sbjct: 156 LASLIALGRSEIPEV 170
>gi|23271506|gb|AAH16882.1| C22orf9 protein, partial [Homo sapiens]
Length = 202
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 3/61 (4%)
Query: 241 FLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
F GSIRY+ALK+VYD R SV+ + Q+MSFG + S +EFV+MKGPQGKG AEMAV+
Sbjct: 1 FQGSIRYEALKKVYDNRVSVAARMAQKMSFGFY---KYSNMEFVRMKGPQGKGHAEMAVS 57
Query: 301 K 301
+
Sbjct: 58 R 58
>gi|340709348|ref|XP_003393272.1| PREDICTED: exosome complex component RRP43-like [Bombus terrestris]
Length = 278
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N +SI+ + A++ + + V+ + + PKA P G + N EL P+ SP+F
Sbjct: 36 SVNISSITHADSSAIF--KIGNTTVVCGIKAELAAPKAESPECGYIVPNIELPPLCSPKF 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G +D + +I + +E + S IDL+ LCV + VW + DL +NYDG+++ C
Sbjct: 94 RPGPPSDQAQVITKLIENILRNSAAIDLKDLCVYKGKLVWVLYCDLVCINYDGSIIDACI 153
Query: 552 IAALAALAHFRHPDV---TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
A A L+ P+ TG ++ ++S I + PV+I++A+FN
Sbjct: 154 GALTATLSTLTLPETLYNVETG-RVSVNSTKR---IRFLVKALPVSITFAIFN 202
>gi|387915884|gb|AFK11551.1| exosome complex component RRP43 [Callorhinchus milii]
Length = 291
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SI+ +G A+ + + V+ + +P P
Sbjct: 17 FLKENCRPDGRELGEFRTTTLNIGSITTADGSALV--KLGNTTVVCGIKMEFAVPTVDAP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G + N +L P+ S +F G + + ++F+ + S+ + E LC+ + VW
Sbjct: 75 NKGYVVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIENSQFLQKEDLCIEKGKLVWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKD---PIPMTIL 589
V D+ L+YDGNLL C IA LAAL + + P V+ + + AE D + I
Sbjct: 135 VYCDMMCLDYDGNLLDACIIALLAALKNVQLPPVSIS----VETGLAEVDMNQKNQLNIR 190
Query: 590 HYPVTISYAVFN 601
+PV S+A+F+
Sbjct: 191 KHPVATSFAIFD 202
>gi|355686810|gb|AER98194.1| exosome component 8 [Mustela putorius furo]
Length = 246
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ + P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLSW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ D+ L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDIICLDYDGNILDACTFALLAALKNVQLPEVTINEETGLAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|182889712|gb|AAI65543.1| Exosc8 protein [Danio rerio]
Length = 277
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R F ++ N SIS +G A+ + + V+ + + +P +
Sbjct: 17 FLKENCRPDGRELGKFRPTTLNINSISTADGSALV--KIGNTTVICGIKAELAVPPSEAQ 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G L N +L P+ S +F G + + ++F+ + S I+LE LC+ + W
Sbjct: 75 NKGYLVPNVDLPPLCSSRFRAGPPGEQAQAASQFIADVIESSDLINLEELCIEKAKLCWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ D+ L+YDGNLL C LAAL + P+VT + + EK + I +P
Sbjct: 135 LYCDIMCLDYDGNLLDACITVLLAALKTAQLPEVTINKETDLAEVDIEKKR-RLKINRHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VGSSFAVFD 202
>gi|442763221|gb|JAA73769.1| Putative exosomal 3'-5' exoribonuclease complex subunit rrp43,
partial [Ixodes ricinus]
Length = 257
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SIS +G A+ + + V+ + + P + P G + N +L P+ SP F+
Sbjct: 40 NIGSISTADGSALV--KMGCTTVVCGIKAELAEPSVSEPKCGFIVPNVDLPPLCSPMFKP 97
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G + +++ + S C+DLE LC+ + W +++DL L+YDGNL C +A
Sbjct: 98 GPPGPQAQVLSTMMLDVLSNSNCVDLEKLCIEEAKLCWCLQLDLTCLDYDGNLAEACVLA 157
Query: 554 ALAALAHFRHPDVTSTGDQI 573
A AAL+ P V++ ++
Sbjct: 158 ATAALSSLTLPKVSTAEGKV 177
>gi|291226456|ref|XP_002733208.1| PREDICTED: exosome component 8-like [Saccoglossus kowalevskii]
Length = 275
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SIS G A+ + + V+ + + P P +G + N +L P+ SP+F
Sbjct: 38 NIGSISTAEGSALV--KLGNTTVICGIKAELCTPTNDEPKKGFVVPNVDLPPLCSPRFRP 95
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G ++ + ++++F+ K+SK ++ E LC+ + VW + D+ L+YDGN++ C I+
Sbjct: 96 GPPSEQAQVVSQFIADVLKDSKMVNHEDLCIAEGKIVWVLYCDMMCLDYDGNVIDACIIS 155
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
LAAL + P + ++ MT+ PV+ S+A+F+
Sbjct: 156 LLAALRNVALPSI-EVDEETAKPKLTSSTSSTMTVQSLPVSTSFAIFD 202
>gi|73993245|ref|XP_534492.2| PREDICTED: exosome complex component RRP43 isoform 1 [Canis lupus
familiaris]
Length = 276
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ + P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLSW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ D+ L+YDGN+L C+ A LAAL + + P+VT + + +K + I +
Sbjct: 134 VLYCDIICLDYDGNILDACTFALLAALKNAQLPEVTINEETGLAEVNLKKKSY-LNIRTH 192
Query: 592 PVTISYAVFN 601
PV S+AVF+
Sbjct: 193 PVATSFAVFD 202
>gi|350425266|ref|XP_003494065.1| PREDICTED: exosome complex component RRP43-like [Bombus impatiens]
Length = 278
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N +SI+ + A++ + + V+ + + PKA P G + N EL P+ SP+F
Sbjct: 36 SVNISSITHADSSAIF--KIGNTTVVCGIKAELAAPKAESPECGYIVPNIELPPLCSPKF 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G +D + +I + +E + S IDL+ LCV + VW + DL +NYDG+++ C
Sbjct: 94 RPGPPSDQAQVITKLVENILRNSAAIDLKDLCVYKGKLVWVLYCDLVCINYDGSIIDACI 153
Query: 552 IAALAALAHFRHPDV---TSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
A A L+ P+ TG ++ ++S I + PV+I++A+FN
Sbjct: 154 GALTATLSTLTLPETLYNVETG-RVSVNSTKR---IRFLVKALPVSITFAIFN 202
>gi|385773350|ref|YP_005645916.1| 3' exoribonuclease [Sulfolobus islandicus HVE10/4]
gi|385775988|ref|YP_005648556.1| 3' exoribonuclease [Sulfolobus islandicus REY15A]
gi|323474736|gb|ADX85342.1| 3' exoribonuclease [Sulfolobus islandicus REY15A]
gi|323477464|gb|ADX82702.1| 3' exoribonuclease [Sulfolobus islandicus HVE10/4]
Length = 275
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA + P PN+G L +N EL P+A FE G + ++ + R +++ ++SK
Sbjct: 63 VLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L + + VW V +D+ VL+Y GN+L C++A++AAL + + V + +
Sbjct: 123 ALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQDSNGFRV 182
Query: 576 HSAAEKDPIPMTILHYPVTISYA 598
+ +P+ H VT+S A
Sbjct: 183 NKNEVVGKLPLN--HPVVTVSIA 203
>gi|227827678|ref|YP_002829458.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus islandicus
M.14.25]
gi|229584882|ref|YP_002843384.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus islandicus
M.16.27]
gi|259645402|sp|C3N5R4.1|ECX2_SULIA RecName: Full=Probable exosome complex exonuclease 2
gi|259645405|sp|C3MVG5.1|ECX2_SULIM RecName: Full=Probable exosome complex exonuclease 2
gi|227459474|gb|ACP38160.1| 3' exoribonuclease [Sulfolobus islandicus M.14.25]
gi|228019932|gb|ACP55339.1| 3' exoribonuclease [Sulfolobus islandicus M.16.27]
Length = 275
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA + P PN+G L +N EL P+A FE G + ++ + R +++ ++SK
Sbjct: 63 VLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L + + VW V +D+ VL+Y GN+L C++A++AAL + + V + +
Sbjct: 123 ALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALHNTKVYKVEQDSNGFRV 182
Query: 576 HSAAEKDPIPMTILHYPVTISYA 598
+ +P+ H VT+S A
Sbjct: 183 NKNEVVGKLPLN--HPVVTVSIA 203
>gi|227830375|ref|YP_002832155.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus islandicus
L.S.2.15]
gi|229579193|ref|YP_002837591.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus islandicus
Y.G.57.14]
gi|238619849|ref|YP_002914675.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus islandicus
M.16.4]
gi|284997881|ref|YP_003419648.1| 3'exoribonuclease [Sulfolobus islandicus L.D.8.5]
gi|259645403|sp|C4KHE3.1|ECX2_SULIK RecName: Full=Probable exosome complex exonuclease 2
gi|259645404|sp|C3MQ47.1|ECX2_SULIL RecName: Full=Probable exosome complex exonuclease 2
gi|259645407|sp|C3NED0.1|ECX2_SULIY RecName: Full=Probable exosome complex exonuclease 2
gi|227456823|gb|ACP35510.1| 3' exoribonuclease [Sulfolobus islandicus L.S.2.15]
gi|228009907|gb|ACP45669.1| 3' exoribonuclease [Sulfolobus islandicus Y.G.57.14]
gi|238380919|gb|ACR42007.1| 3' exoribonuclease [Sulfolobus islandicus M.16.4]
gi|284445776|gb|ADB87278.1| 3'exoribonuclease [Sulfolobus islandicus L.D.8.5]
Length = 275
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA + P PN+G L +N EL P+A FE G + ++ + R +++ ++SK
Sbjct: 63 VLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L + + VW V +D+ VL+Y GN+L C++A++AAL + + V + +
Sbjct: 123 ALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQDSNGFRV 182
Query: 576 HSAAEKDPIPMTILHYPVTISYA 598
+ +P+ H VT+S A
Sbjct: 183 NKNEVVGKLPLN--HPVVTVSIA 203
>gi|426236417|ref|XP_004012165.1| PREDICTED: exosome complex component RRP43 [Ovis aries]
Length = 276
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SI +G ++ + + V+ + P P
Sbjct: 17 FLKENCRPDGRELGEFRTTTVNVGSIGTADGSSLV--KLGNTTVICGIKAEFGAPPTDAP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
++G + N +LSP+ S +F +G + + + ++F+ + S+ I E LC+ + + W
Sbjct: 75 DKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ DL LN+DGN+L C+ A LAAL + + P+VT + + +K + I +P
Sbjct: 135 LYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VATSFAVFD 202
>gi|229582055|ref|YP_002840454.1| exosome complex RNA-binding protein Rrp42 [Sulfolobus islandicus
Y.N.15.51]
gi|259645406|sp|C3NHC2.1|ECX2_SULIN RecName: Full=Probable exosome complex exonuclease 2
gi|228012771|gb|ACP48532.1| 3' exoribonuclease [Sulfolobus islandicus Y.N.15.51]
Length = 275
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VLA + P PN+G L +N EL P+A FE G + ++ + R +++ ++SK
Sbjct: 63 VLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSK 122
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+DL L + + VW V +D+ VL+Y GN+L C++A++AAL + + V + +
Sbjct: 123 ALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQDSNGFRV 182
Query: 576 HSAAEKDPIPMTILHYPVTISYA 598
+ +P+ H VT+S A
Sbjct: 183 NKNEVVGKLPLN--HPVVTVSIA 203
>gi|413953850|gb|AFW86499.1| hypothetical protein ZEAMMB73_626410 [Zea mays]
Length = 448
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 512 KESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
+ES+ +D+E LCVVA + VW+V VDL++L+ GNL+ +IAALAAL+ F P+ T GD
Sbjct: 15 RESRAVDMEFLCVVAGKHVWSVHVDLHILDDGGNLIDAANIAALAALSTFWRPECTVGGD 74
Query: 572 ---QIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
Q+ +H +DP+P+TI H P+ +++A F G+
Sbjct: 75 DGQQVTVHDPEVRDPLPLTIHHMPIAVTFAYFGEGN 110
>gi|440298206|gb|ELP90846.1| exosome complex exonuclease RRP45, putative [Entamoeba invadens
IP1]
Length = 263
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 465 VIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCV 524
V P TR + G+ +N MA+P F + + I R +E+ ++ ID++ L +
Sbjct: 53 VTPIGTR-DSGIFHVNVNFLQMANPDFLDAKGPRDLIEIGRVVERALLSTRAIDIDGLVL 111
Query: 525 VAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPI 584
V + VW++ V +N++N GNL+ ++ A+++L +V G + I + E+ P
Sbjct: 112 VRGKLVWSITVCVNIINDSGNLMDLVAMTAISSLLTALKREVEICGTDVKILTVEERKPK 171
Query: 585 PMTILHYPVTISYAVFNGG 603
P++I H P+TIS+ + + G
Sbjct: 172 PLSIHHIPITISFGITDEG 190
>gi|336372937|gb|EGO01276.1| hypothetical protein SERLA73DRAFT_179422 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385769|gb|EGO26916.1| hypothetical protein SERLADRAFT_464533 [Serpula lacrymans var.
lacrymans S7.9]
Length = 288
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 423 DWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAE 482
+W DV S N SIS +G A+ + + V+ V + P+ P+EG L N +
Sbjct: 49 EWRDV----SLNVGSISTADGSALV--RMGDTTVVCGVKAEIAEPELDHPDEGYLVPNLD 102
Query: 483 LSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNY 542
L M S +F+ G T+ + +++ L + S I L SLC+ + VW + VD +NY
Sbjct: 103 LPAMCSSKFKPGPPTEEAQVLSDRLNQALVMSGVISLSSLCIHSGRSVWTLYVDATCINY 162
Query: 543 DGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPVTISYAV 599
GN +A +AAL + R P + +G + + K+ +P+T+ +P + S+ +
Sbjct: 163 AGNAFDATLLAMVAALKNTRIPQASFDEESGRTV----CSRKNRVPLTLSRFPTSASFGI 218
Query: 600 FNG 602
F+
Sbjct: 219 FDA 221
>gi|221484708|gb|EEE23002.1| exosome complex exonuclease, putative [Toxoplasma gondii GT1]
Length = 449
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 65/107 (60%)
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G+ ++ + R L + K+S+ +D E+LC+ + + W+V V + VL DGNL +A
Sbjct: 112 GKSSELERELERMLRRLLKDSRVVDTEALCIQSGKWAWHVLVAVTVLEDDGNLRDAALLA 171
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
AL L HF+ +T G+ ++H+AA+++P+P+ I H PV +S+A
Sbjct: 172 ALCGLMHFKKEVLTVDGETAVLHAAADREPLPLCIHHLPVLVSFAFL 218
>gi|74146647|dbj|BAE41329.1| unnamed protein product [Mus musculus]
Length = 257
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 431 SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQ 490
++ N SIS +G A+ + + V+ V P P+ G + N +L P+ S +
Sbjct: 16 TTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCSSR 73
Query: 491 FETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCC 550
F TG + + + ++F+ S+ I E LC+ + W + DL L+YDGN+L C
Sbjct: 74 FRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILDAC 133
Query: 551 SIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ A LAAL + + P+VT + + +K + + PV S+AVF+
Sbjct: 134 TFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNVRTNPVATSFAVFD 183
>gi|389612638|dbj|BAM19744.1| unknown protein, partial [Papilio xuthus]
Length = 204
Score = 78.2 bits (191), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ + PKA P+ G L N EL P+ SP+F G +D + +I+ + +
Sbjct: 20 TTVICGTKLELAAPKAEDPDSGFLVTNVELVPLCSPKFRPGPPSDHAQVISNVVSEIINN 79
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
SK I+L+ LC+V+++ W + D+ L+ DGN++ C A A+L P VT +
Sbjct: 80 SKFINLKDLCIVSDKLAWVLYCDIVCLDNDGNVVDACITALTASLKTLSLPTVTYDPETE 139
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
I + I + + PV S+A+F
Sbjct: 140 EI-KVDTNNRISLKVNGLPVATSFAIF 165
>gi|392568344|gb|EIW61518.1| hypothetical protein TRAVEDRAFT_35012 [Trametes versicolor
FP-101664 SS1]
Length = 287
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 14/214 (6%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ + +W DV + SIS NG A+ + + V+ V + P+ RP G
Sbjct: 41 DGRNLDEWRDVSVIVD----SISTANGSALV--RLGSTTVVCGVKAEIAEPELDRPEHGF 94
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
L N +L + SP+F+ G TD + +++ L + S + +SLC+ + VW + VD
Sbjct: 95 LVPNLDLPAICSPKFKPGPPTDEAQVLSDRLNEVLVSSGVVSTKSLCIEPGKAVWVLYVD 154
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPV 593
+NYDGN +A +AAL P T T I E P+ I P
Sbjct: 155 ATCINYDGNAFDATLLAMVAALKSTTLPKATYDEETKRTICSRKVQE----PLQIGRLPT 210
Query: 594 TISYAVFNGGSEGSTVPGFTECIQLDTALALSQD 627
+ S+ VF+G + F E + LDT +++ D
Sbjct: 211 SFSFGVFDGTHILADPTSFEEPL-LDTTISVVVD 243
>gi|353239012|emb|CCA70939.1| related to Exosome complex exonuclease RRP43 [Piriformospora indica
DSM 11827]
Length = 279
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 406 RGFTQTF---HFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSC 462
R + Q F H + +R D ++ + SIS +G A+ + + ++ V
Sbjct: 13 RAYLQRFLDEHLRPDGRRPLDCRPLELTTG----SISTADGSALV--RLGETTIVCGVKA 66
Query: 463 NMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESL 522
+ P P G + N E+S + + +F+ G ++ + +I+ L + +SKC+ L+SL
Sbjct: 67 EIAEPDLDAPTRGFIVPNVEISAICAARFKPGPPSEEAQIISEQLNQIIAKSKCLPLDSL 126
Query: 523 CVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD-QIIIHSAAEK 581
C+ + VW + +D +NYDGN L +A AL++ + P D ++++ S K
Sbjct: 127 CIEPRKAVWTIYIDAVCINYDGNALDATLLAMTTALSNTQLPQARYDDDKKMVLCSRMNK 186
Query: 582 DPIPMTILHYPVTISYAVF 600
P+ + L P ++ +F
Sbjct: 187 TPLALKTL--PTATTFGIF 203
>gi|170039450|ref|XP_001847547.1| exosome complex exonuclease RRP43 [Culex quinquefasciatus]
gi|167863024|gb|EDS26407.1| exosome complex exonuclease RRP43 [Culex quinquefasciatus]
Length = 274
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N+ SI++ +G ++ + + V+ + + PK P G L N E+SP+ SP++
Sbjct: 39 NFGSITSADGSSIV--KIGNTTVVCGIKAELTPPKPVEPETGFLVPNIEISPLCSPKYRP 96
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G ++ + + + L S C++L+ LC+ E+ VW + DL L++DG + IA
Sbjct: 97 GPPSEEAQVYSCSLADAILNSGCVNLKDLCITKEKLVWALYCDLVCLDHDGCVFDASVIA 156
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNG 602
+AAL P + D E+ +T+ PVT S+AV G
Sbjct: 157 LVAALHTLTLPRMRHNADTDEREVLEEEPREALTLSSIPVTTSFAVLCG 205
>gi|346473845|gb|AEO36767.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ V + P P +G + N +L P+ SP F+ G + + ++++ +
Sbjct: 4 TTVVCGVKAELAEPAVAMPKQGYIVPNVDLLPLCSPMFKPGPPGEQAQVLSKLMLDILTS 63
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +DLE LC+ + VW++ VDL L+YDGN+ C +AA AAL P V +T ++
Sbjct: 64 SDSLDLEKLCIEEGKLVWSLNVDLTCLDYDGNVAEACILAATAALCSLTLPKVLTTDGEV 123
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDT-ALALSQDRQKLG 632
+ E+ + P+ ++AV + EC+ +T + L+ D + G
Sbjct: 124 NVLLEREE----AKVTEGPLAATFAVLADDTIVVDPTHEEECLAAETFTVILNADNKICG 179
Query: 633 V 633
V
Sbjct: 180 V 180
>gi|170056939|ref|XP_001864258.1| exosome complex exonuclease RRP43 [Culex quinquefasciatus]
gi|167876545|gb|EDS39928.1| exosome complex exonuclease RRP43 [Culex quinquefasciatus]
Length = 274
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N+ SI++ +G ++ + + V+ + + PK P G L N E+SP+ SP++
Sbjct: 39 NFGSITSADGSSIV--KIGNTTVVCGIKAELAPPKPVEPETGFLVPNIEISPLCSPKYRP 96
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G ++ + + + L S C++L+ LC+ E+ VW + DL L++DG + IA
Sbjct: 97 GPPSEEAQVYSCSLADAILNSGCVNLKDLCITKEKLVWALYCDLVCLDHDGCVFDASVIA 156
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNG 602
+AAL P + D E+ +T+ PVT S+AV G
Sbjct: 157 LVAALHTLTLPRMRHNADTDEREVLEEEPREALTLSSIPVTTSFAVLCG 205
>gi|118792101|ref|XP_320154.3| AGAP012402-PA [Anopheles gambiae str. PEST]
gi|116116739|gb|EAA00202.3| AGAP012402-PA [Anopheles gambiae str. PEST]
Length = 274
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
I + +G A+ V + V+ + + P A P G L N +LSP++SP + G
Sbjct: 43 IKSADGSAIV--KVGNTTVVCGIKAELATPNALAPRHGFLVPNVDLSPVSSPSYRPGPPC 100
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAA 557
D + + ++ + ++CIDL+ LC+ + VW + DL L++DG +L IA +AA
Sbjct: 101 DEAQVYSQSVADAISNARCIDLQQLCISPGKLVWCLYCDLVCLDHDGCVLDAAIIALVAA 160
Query: 558 LAHFRHPDVTSTGDQIIIHSAAEKDP---IPMTILHYPVTISYAVFNG 602
+ P + D E D +P+T+ PVT S+ + G
Sbjct: 161 FHTVKLPTIQYNSDT----EETEADTSRLLPLTVDCVPVTTSFVMVAG 204
>gi|14475940|gb|AAK62787.1|AC027036_8 unknown protein [Arabidopsis thaliana]
Length = 749
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 45/257 (17%)
Query: 72 TSYWTDLFVRYFLFQTDSNI-DCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP 130
+++W +F YF+ +S DDLLFFVRK K+ + R+ + KL
Sbjct: 423 SNFWHGVFDVYFVRCMESRRRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLD 482
Query: 131 --IGD--PDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLKRHSQKVYASPSRRR 186
+G+ +VDW ++ YLNMI H +T+T+AIC+ + K Q S+ SP +
Sbjct: 483 ELLGESLAEVDWRKSFYLNMIAHT-SFTVTVAICSNEALKTYQ----GSKDTKLSPIYKE 537
Query: 187 MDTKGEVEEMTYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASDRAG----------- 234
++T YP +CF VD+F+ F +++ D + CV L + D A
Sbjct: 538 VETTP-----AYPEICFAVDDFDSTFDAVVLTDKDHCYCVLLNSHDGAAFPSATVKDSSD 592
Query: 235 -----------SVKSVIFLGSIRYDALKRVYDARTSVSNKFTQRMSFGIFSNNSNSRIEF 283
K +F G + Y ++ Y+ N+F +S G + ++
Sbjct: 593 SNTNADPRTVKDPKVTLFSGFVSYQMVREAYEGG---RNRFGSLLSLGHITGKADR---- 645
Query: 284 VKMKGPQGKGFAEMAVT 300
+ M+GP G+G E+AV+
Sbjct: 646 LYMRGPGGRGEVEVAVS 662
>gi|156230391|gb|AAI52249.1| MGC174638 protein [Danio rerio]
Length = 277
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SIS +G A+ + + V+ + + +P +
Sbjct: 17 FLKENCRPDGRELGEFRPTTLNINSISTADGSALV--KIGNTTVICGIKAELAVPPSEAQ 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G L N +L P+ S +F G + + ++F+ + S I+ E LC+ + W
Sbjct: 75 NKGYLVPNVDLPPLCSSRFGAGPPGEQAQAASQFIADVIESSDLINSEELCIEKAKLCWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ D+ L+YDGNLL C LAAL + P+VT + + EK + I +P
Sbjct: 135 LYCDIMCLDYDGNLLDACITVLLAALKTAQLPEVTINKETDLAEVDIEKKR-RLKINRHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VGSSFAVFD 202
>gi|444726907|gb|ELW67422.1| Exosome complex component RRP43 [Tupaia chinensis]
Length = 248
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 431 SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQ 490
++ N SIS +G A+ + + V+ V P P++G + N +L P+ S +
Sbjct: 35 TTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPTDTPDKGYIIPNVDLPPLCSSR 92
Query: 491 FETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCC 550
F +G + + + +F K S+ I E L + + W + DL L+YDGN+L C
Sbjct: 93 FRSGPPGEEAQVAGQFTAYVIKNSQIIQKEDLFISPGKLAWVLYCDLICLDYDGNILDAC 152
Query: 551 SIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ A LAAL + + P+VT + + +K + I +PV S+AVF+
Sbjct: 153 TFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTHPVATSFAVFD 202
>gi|326914227|ref|XP_003203428.1| PREDICTED: exosome complex exonuclease RRP43-like [Meleagris
gallopavo]
Length = 291
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SI+ +G A+ + + V+ V + P
Sbjct: 31 RFLKENCRPDGRELGEFRATTVNIGSITTADGSALV--KLGNTTVICGVKAELAAPAVDS 88
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
N+G + N EL + S +F +G + + ++F+ + S+ I E LC+ + W
Sbjct: 89 ANKGYIVPNVELPSLCSTRFRSGPPGEEAQAASQFIADVIENSQIIAKEDLCIAEGKLAW 148
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ D+ L+YDGN+L + A LAAL + + P VT ++ + K P+ I +
Sbjct: 149 VLYCDIICLDYDGNILDASTFALLAALKNVQLPSVT-INEETGLSEVNLKQKNPLVIRKH 207
Query: 592 PVTISYAVFN 601
PV S+A+F+
Sbjct: 208 PVATSFAIFD 217
>gi|395520931|ref|XP_003764575.1| PREDICTED: exosome complex component RRP43 [Sarcophilus harrisii]
Length = 276
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SI+ +G A+ + + V+ V P
Sbjct: 17 FLKENCRPDGRELGEFRTTTINIGSITTADGSALV--KLGNTTVICGVKAEFAAPPVDSL 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 75 NKGYIVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISHGKLAWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ DL L+YDGN+L C+ A LAAL + + P VT ++ + K + I +P
Sbjct: 135 LYCDLICLDYDGNILDACTFALLAALKNVQLPAVT-INEETGLAEVNFKKKSHLNIRTHP 193
Query: 593 VTISYAVFN 601
+ S+A+F+
Sbjct: 194 IATSFAIFD 202
>gi|342321513|gb|EGU13446.1| Hypothetical Protein RTG_00162 [Rhodotorula glutinis ATCC 204091]
Length = 298
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Query: 416 KESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEG 475
+++ A W DV S N S+S A+ + + V+ V+ + P RPNEG
Sbjct: 41 EQAAAADAWRDV----SVNTGSVSTAPSSALV--RLGKTSVVCGVTLEIAPPDLARPNEG 94
Query: 476 LLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRV 535
+ N +LSP+ SP F G D + +++ L S + L SL + + VW V +
Sbjct: 95 FIVPNVDLSPLCSPLFRPGPPPDEAQVLSSRLRDVLLSSNILPLSSLVIEPGKAVWVVYI 154
Query: 536 DLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD--QIIIHSAAEKDPIP-MTILHYP 592
D+ LNYDG +L +AA+ AL + R P+ T D ++ AE+ P ++ P
Sbjct: 155 DVVCLNYDGGVLDAAVLAAVGALRNLRFPETTFDVDTSEVTCERVAEEHPGSRISGRREP 214
Query: 593 VTISYAVFNG 602
++S+ VFNG
Sbjct: 215 FSVSFGVFNG 224
>gi|254675240|ref|NP_001157042.1| exosome complex component RRP43 isoform 1 [Mus musculus]
Length = 280
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ V P
Sbjct: 16 RFLKENCRPDGRELGEFRATTVNIGSISTADGSALV--KLGNTTVICGVKAEFAAPPVDA 73
Query: 472 PNEG-LLFI---NAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P+ G ++F+ N +L P+ S +F TG + + + ++F+ S+ I E LC+
Sbjct: 74 PDRGYVVFLSVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPG 133
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMT 587
+ W + DL L+YDGN+L C+ A LAAL + + P+VT + + +K +
Sbjct: 134 KLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LN 192
Query: 588 ILHYPVTISYAVFN 601
+ PV S+AVF+
Sbjct: 193 VRTNPVATSFAVFD 206
>gi|18313177|ref|NP_559844.1| exosome complex RNA-binding protein Rrp42 [Pyrobaculum aerophilum
str. IM2]
gi|29336869|sp|Q8ZVN0.1|ECX2_PYRAE RecName: Full=Probable exosome complex exonuclease 2
gi|18160691|gb|AAL64026.1| 3' exoribonuclease family protein [Pyrobaculum aerophilum str. IM2]
Length = 274
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 9/181 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V + P P+EG+L +NAE+ P ASP E G + ++ + R +++ +
Sbjct: 62 THVVAGVKVGLGQPFPDAPDEGVLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGIRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D + L V K + + +DL V+N DGNL+ ++A++AAL + + P V +
Sbjct: 122 CGYVDFKKLAVEG-GKAYVLWIDLYVINDDGNLIDVANLASVAALKNTQLPVVVKDEAGV 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV---PGFTECIQLDTALALSQDRQK 630
+ K P+P+ I P+ +S G G+ + P F E + LD + + K
Sbjct: 181 VKLDRNNKAPLPVDISKAPIAVSV-----GKIGNVLFLDPTFEEELSLDGRITFTFSEDK 235
Query: 631 L 631
+
Sbjct: 236 I 236
>gi|363729290|ref|XP_003640625.1| PREDICTED: exosome complex component RRP43-like [Gallus gallus]
Length = 276
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SI+ +G A+ + + V+ V + P
Sbjct: 16 RFLKENCRPDGRELGEFRATTVNIGSITTADGSALV--KLGNTTVICGVKAELAAPALDS 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
N+G + N EL + S +F +G + + ++F+ + S+ I E LC+ + W
Sbjct: 74 ANKGYIVPNVELPSLCSTRFRSGPPGEEAQAASQFIADVIENSQVIAKEDLCIADGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ D+ L+YDGN+L + A LAAL + + P VT ++ + K P+ I +
Sbjct: 134 VLYCDIICLDYDGNILDASTFALLAALKNVQLPSVT-INEETGLSEVNLKQKNPLVIRKH 192
Query: 592 PVTISYAVFN 601
PV S+A+F+
Sbjct: 193 PVATSFAIFD 202
>gi|302686574|ref|XP_003032967.1| hypothetical protein SCHCODRAFT_76318 [Schizophyllum commune H4-8]
gi|300106661|gb|EFI98064.1| hypothetical protein SCHCODRAFT_76318 [Schizophyllum commune H4-8]
Length = 291
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 424 WTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAEL 483
W DV + N SIS +G ++ + + ++ V + P P +G + N +L
Sbjct: 56 WRDV----AVNVGSISTADGSSLV--RLGDTTIVCGVKAEIAQPDLDSPEDGFIVPNVDL 109
Query: 484 SPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYD 543
+ SP+F+ G T+ + +++ L + + SL + + W + +D +NYD
Sbjct: 110 PAICSPKFKPGPPTEEAQVLSDRLNEVLTAHDVLPTSSLIIHPGKAAWVLYIDATCINYD 169
Query: 544 GNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
GN IA +AAL R P D + + + D P+T+ + P+ +S+ VFNG
Sbjct: 170 GNAFDATLIAMIAALKSTRLPRAKYDEDTGKV-TCSRHDRDPLTLTNLPIAMSFGVFNGD 228
Query: 604 SEGSTVPGFTE-CIQLDTALALSQDRQKLGVDSA 636
+ S + F E + + + L QD L V A
Sbjct: 229 TIMSDLTSFEEPLMDTNVTVILGQDGGVLSVTQA 262
>gi|408404984|ref|YP_006862967.1| exosome complex exonuclease [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408365580|gb|AFU59310.1| putative exosome complex exonuclease [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 274
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
SEV+A + P +G L + AE+ P ASP E G + V + R +++ +E
Sbjct: 61 SEVIAGIKVETGEPFEGLEEKGALIVTAEVLPTASPYIEPGPPDEEVVELARVVDRGVRE 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ IDL+ L +V + V+ + VD +V+N DGNL S A +A+L + P + D++
Sbjct: 121 SEMIDLDQLVLVPGKIVYTIFVDCSVINADGNLFDATSYAVVASLLTAKLPILEMKDDKV 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYA 598
+ + P+P+T + PV+I+ A
Sbjct: 181 V--DTGQTRPMPVTTI--PVSITAA 201
>gi|269115421|gb|ACZ26287.1| putative exosome complex exonuclease [Mayetiola destructor]
Length = 273
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SI + +G A+ + + V+ + + P P G L N +L+P+ SP++ +
Sbjct: 38 NIKSIGSADGSAIV--KLGNTTVICGIKAELTAPNVEEPQNGYLIPNIDLTPLCSPKYRS 95
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
TD + ++ L ++SK IDL+ LC+ E+ VW + D+ ++YDG++L +A
Sbjct: 96 AASTDDAQVLTCHLNDIIRDSKWIDLKQLCIAKEKLVWILYCDITCIDYDGSILDASVVA 155
Query: 554 ALAALAHFRHPDVTS--TGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGS 604
AAL P V + +H E+ P+ ++ + PV+ + VF+ S
Sbjct: 156 LCAALRSLMLPKVQYDIETNNYTVHQ-TERSPLELS-ENCPVSTTCMVFDEKS 206
>gi|327400939|ref|YP_004341778.1| exosome complex exonuclease 2 [Archaeoglobus veneficus SNP6]
gi|327316447|gb|AEA47063.1| exosome complex exonuclease 2 [Archaeoglobus veneficus SNP6]
Length = 259
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ V P P++G++ NAEL P+ASP FE G + S+ + R +++ +E
Sbjct: 56 TQVVVGVKMQPGEPFPDAPDKGIIITNAELVPLASPTFEPGPPDENSIELARVVDRGIRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLL 547
S+ +DL LC+ EKVW + +D++ L+ DGNL+
Sbjct: 116 SEAVDLTKLCIEEGEKVWLIFIDIHALDDDGNLM 149
>gi|328773489|gb|EGF83526.1| hypothetical protein BATDEDRAFT_9008 [Batrachochytrium
dendrobatidis JAM81]
Length = 285
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F +E RA + F ++E ++ I++ +G V + V+ + + P T P
Sbjct: 33 FIQEGVRADGRPLLHFRNTELDFGPITSASGSVSV--KVGDTSVICAIKAELAEPAPTLP 90
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
+G L N +L + + F G + + I+ FL +DLESLCVV + VW
Sbjct: 91 YQGYLVPNVDLPALCASHFRPGPPCELAQSISTFLNNIISSGNVLDLESLCVVPGKVVWV 150
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI-IIHSAAEKDPIPMTILHY 591
+ D+ LNY GN+ A +AAL + + P+VT + + +I++ K P+ +
Sbjct: 151 LYADIVCLNYAGNIFDASVDALIAALCNVKLPEVTISDESAPVINNLPAK---PLKLNRI 207
Query: 592 PVTISYAVFNG 602
++ ++A+F+G
Sbjct: 208 LISSTFAIFDG 218
>gi|224043308|ref|XP_002196618.1| PREDICTED: exosome complex component RRP43 [Taeniopygia guttata]
Length = 276
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SI+ +G A+ + + V+ V + P A
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSITTADGSALV--KLGNTTVICGVKAELAAPAADS 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
N+G + N EL + + +F +G + + ++F+ + S+ I E LC+ + W
Sbjct: 74 ANKGYIVPNVELPSLCAERFRSGPPGEEAQAASQFIADVIENSQMIVKEDLCIANGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ D+ L+YDGNLL A LAAL + + P VT ++ + K P+ I +
Sbjct: 134 VLYCDIICLDYDGNLLDASVFALLAALKNVQLPSVT-INEETGLSEVNLKQKNPLIIRKH 192
Query: 592 PVTISYAVFN 601
PV S+A+F+
Sbjct: 193 PVATSFAIFD 202
>gi|410915784|ref|XP_003971367.1| PREDICTED: exosome complex component RRP43-like [Takifugu rubripes]
Length = 276
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 413 HFWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R ++F ++ N SIS +G A+ V + ++ + + P
Sbjct: 16 RFLKENCRPDGRELLEFRPTTLNIGSISTADGSALV--KVGNTTIICGIKAELATPTVEA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P +G + N +L P+ S +F G + + ++F+ + S+ I + LCV + W
Sbjct: 74 PGKGYIVPNVDLPPLCSSRFRPGPPGEPAQACSQFIADLIESSEIIQTDDLCVERGKLCW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD-VTSTGDQIIIHSAAEKDPIPMTILH 590
+ DL L+YDGNL C IA LAAL + + P+ V ST + + ++ + +
Sbjct: 134 VLYCDLMCLDYDGNLRDACVIALLAALKNTQLPEAVISTETHLPVVDLEKRH--GLKVCK 191
Query: 591 YPVTISYAVFN 601
+PV S+ +F+
Sbjct: 192 HPVASSFCIFD 202
>gi|387018402|gb|AFJ51319.1| Exosome complex exonuclease RRP43-like [Crotalus adamanteus]
Length = 276
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SI+ +G A+ + + V+ + P
Sbjct: 20 RFLKENCRPDGRDLGEFRTTTINIGSITTADGSALV--KLGNTTVICGIKAEFATPTVDS 77
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
N+G + N +L P+ S +F G + + ++F+ + S+ I E LC++ + VW
Sbjct: 78 SNKGYIIPNVDLPPLCSSRFRPGPPCEEAQAASQFIADIIENSQMIMKEDLCILDGKIVW 137
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIH-SAAEKDPIPMTILH 590
+ D+ L+YDGNLL C A LAAL + P V + ++ + EK+ P+TI
Sbjct: 138 VLYCDIICLDYDGNLLDACICAFLAALKNVLLPVVAINAETGLVEVNLKEKN--PLTIKK 195
Query: 591 YPVTISYAVFN 601
PV S+ +F+
Sbjct: 196 QPVATSFVLFD 206
>gi|405963081|gb|EKC28685.1| Exosome complex exonuclease RRP42 [Crassostrea gigas]
Length = 262
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++LA V + P +PN+G L + S A+P FE + + I L + +
Sbjct: 56 TDILAGVKAELGTPSPDKPNKGRLEFFVDCSANATPVFEGRGGEELAAEIGNILTRTYDC 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
C DLE+LC++ EE+ W + VD+ +L GNL SIA AAL + + P VT + D+
Sbjct: 116 PSCFDLEALCIIPEEQCWILYVDVLLLECGGNLFDVASIAVKAALYNTKIPKVTVSRDEG 175
Query: 574 IIHSAAEKDP 583
++ DP
Sbjct: 176 LVELEISDDP 185
>gi|257076445|ref|ZP_05570806.1| exosome complex RNA-binding protein Rrp42 [Ferroplasma acidarmanus
fer1]
Length = 260
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 422 QDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINA 481
QD+ ++ +EN+ +A G A+ + ++V+A + P P+ G++ +N
Sbjct: 33 QDYREIKI--TENFVPKAA--GSAMV--EIGKTKVVAGIKVEEGDPFEDSPDSGVMALNI 86
Query: 482 ELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLN 541
EL PMA P FE+G ++ ++ +R +++ +ESK +D L + + ++VW + VD++VLN
Sbjct: 87 ELLPMAFPTFESGPPSEQAIEYSRVVDRGIRESKMVDTSKLVIESGKRVWMIFVDIDVLN 146
Query: 542 YDGNLL 547
YDGN++
Sbjct: 147 YDGNII 152
>gi|302854926|ref|XP_002958966.1| hypothetical protein VOLCADRAFT_108396 [Volvox carteri f.
nagariensis]
gi|300255681|gb|EFJ39971.1| hypothetical protein VOLCADRAFT_108396 [Volvox carteri f.
nagariensis]
Length = 516
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 72/188 (38%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ----------------- 496
+ VL+ V+ ++ +P RP+EG L N E SPMASP FE GR
Sbjct: 57 TRVLSVVTASLEVPFPDRPSEGPLRFNVEFSPMASPAFEPGRPGRQGEAWDPTQGLGLGL 116
Query: 497 ------------------TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLN 538
+ ++ I R +E+ ++S +D E+LCVVA
Sbjct: 117 GRRRRFSELLRRRPSCRGCEDAIQIARLIERGLRQSGAVDQEALCVVA------------ 164
Query: 539 VLNYDGNLLGCCSIAALAALAHFRHPDV---TSTGDQIIIHSAAEKDPIPMTILHYPVTI 595
R P+V +G I++H ++P+P+TI H PV +
Sbjct: 165 ----------------------GRKPEVEVGGESGTDILVHPPEVREPLPLTIHHLPVAV 202
Query: 596 SYAVFNGG 603
++ +F GG
Sbjct: 203 TFGLFQGG 210
>gi|196005309|ref|XP_002112521.1| hypothetical protein TRIADDRAFT_25085 [Trichoplax adhaerens]
gi|190584562|gb|EDV24631.1| hypothetical protein TRIADDRAFT_25085, partial [Trichoplax
adhaerens]
Length = 266
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 413 HFWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F E+ R T F ++ N SI+ NG A+ + + +L + +PK
Sbjct: 12 RFIAENIRPDRRTFKQFRKTTVNVGSITTANGSALV--KIGNTTMLCGIKTEFAVPKLDS 69
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + N +L P+ S +F G + + + +++L K I+L+ LC+V E+ W
Sbjct: 70 PDHGYIVPNVDLPPLCSYRFRPGPPGEQAQVCSQYLADIIKSCNLINLKDLCIVKEKLAW 129
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+ +DL L+ DGN+L IA LAAL + P V
Sbjct: 130 VIYIDLLCLDCDGNVLDASVIAMLAALRSAKFPKV 164
>gi|212721556|ref|NP_001131768.1| exosome complex exonuclease RRP43 [Zea mays]
gi|194692484|gb|ACF80326.1| unknown [Zea mays]
gi|195623954|gb|ACG33807.1| exosome complex exonuclease RRP43 [Zea mays]
gi|414869688|tpg|DAA48245.1| TPA: exosome complex exonuclease RRP43 [Zea mays]
Length = 306
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
++S+ +G A+ + + +LA V ++ P A P+EG + + + P+ SP GR
Sbjct: 58 AVSSAHGSALA--RLGDTAMLASVKLEVMSPPAEHPDEGSVAVEFHMPPICSPLVRPGRP 115
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
TD + +I++ LE S ++L+ LC++ + W +D+ LN DG+L I+A+A
Sbjct: 116 TDVAPVISKALEDVLTSSGMLNLKDLCLITGKASWLAYLDIYCLNADGSLFDAALISAVA 175
Query: 557 ALAHFRHPDVTSTGD 571
A H P + S GD
Sbjct: 176 AFTHLEIP-LVSVGD 189
>gi|356552650|ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
Length = 299
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 389 DMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWC 448
D+ E++ A+ L+ +R F + H + + +S ++++ NG A+
Sbjct: 9 DLSSEMEVDAFRRLFPLRYFER--HLAESIRPDGRPLGKARETSIFLGAVASANGSALV- 65
Query: 449 PWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLE 508
+ + +L + ++ P P+EG L I+ + P+ SP GR + S ++++ L
Sbjct: 66 -KIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLS 124
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
S+ IDL+ L +V + W +D+ L+ DG L I+A+AAL+H + P V
Sbjct: 125 DTISSSRMIDLKELSLVGGKAAWMAYLDIYCLDADGALFDAALISAVAALSHLQIPAVAM 184
Query: 569 TGDQIIIHSAAE 580
D I+ + E
Sbjct: 185 NDDGKIVLVSGE 196
>gi|352682029|ref|YP_004892553.1| exosome complex exonuclease 2 [Thermoproteus tenax Kra 1]
gi|350274828|emb|CCC81474.1| exosome complex exonuclease 2, aRrp42 (RNase PH domain)
[Thermoproteus tenax Kra 1]
Length = 274
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V + P P+EG+L +NAE+ P ASP E G +T++ + R +++ +
Sbjct: 62 TRVVAGVKIGLGNPFPDAPDEGVLVVNAEVLPHASPYSEVGPPDETAIELARVVDRGLRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT 567
S ID + L + + KV+ V +DL VLN DGNL+ ++AA+AAL P V
Sbjct: 122 SGFIDFKRLA-IDQSKVYVVWLDLYVLNDDGNLVDASNLAAVAALRSTMLPTVV 174
>gi|145592135|ref|YP_001154137.1| exosome complex RNA-binding protein Rrp42 [Pyrobaculum arsenaticum
DSM 13514]
gi|145283903|gb|ABP51485.1| ribosomal RNA-processing protein RRP42 [Pyrobaculum arsenaticum DSM
13514]
Length = 276
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V + P P+EG+L ++AE+ P ASP E G ++++ + R +++ +
Sbjct: 62 THVIAGVKVGLGQPFPDAPDEGVLVVSAEVLPHASPYTEVGPPDESAIELARVVDRGIRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D + L V K + + VDL V+N DGNL+ ++A++AAL + + P V
Sbjct: 122 CGYVDFKKLAVEG-GKAYVLWVDLYVINDDGNLVDAANLASVAALKNTQLPAVVKDESGA 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV---PGFTECIQLD--TALALSQDR 628
+ K P+P+ PV +S G + + P F E + LD +S+DR
Sbjct: 181 VKLDRNNKSPLPLETSKVPVAVSV-----GKIANVLFLDPNFEEELSLDGRVTFTISEDR 235
>gi|284161629|ref|YP_003400252.1| 3' exoribonuclease [Archaeoglobus profundus DSM 5631]
gi|284011626|gb|ADB57579.1| 3' exoribonuclease [Archaeoglobus profundus DSM 5631]
Length = 259
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 59/94 (62%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P P++G++ NAEL P+ASP FE G + ++ + R +++ +
Sbjct: 56 TQVVAGVKMQIGEPFPDTPDQGIIITNAELVPLASPTFEPGPPDENAIELARVVDRGIRH 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLL 547
S+ +DL+ LC+ EKVW + +D+ L+ DGNL+
Sbjct: 116 SEAVDLKKLCIEEGEKVWIIFIDIWALDDDGNLM 149
>gi|440790324|gb|ELR11607.1| exosc8 protein [Acanthamoeba castellanii str. Neff]
Length = 278
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 479 INAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK--------V 530
+N EL+P+ SP F+ G+ ++ S I L + + + +D L + +E+ V
Sbjct: 78 VNVELTPLCSPNFKPGKPSELSQYIATILNRLVRTTDLVDESVLRIEDKEEQSKERKAMV 137
Query: 531 WNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD--VTSTGDQIIIHSAAEKDPIPMTI 588
W + VD+ L+YDGN+ C IA L+ALA+ R P V S D + + E + I + +
Sbjct: 138 WYLYVDMYCLDYDGNVFDACLIALLSALANVRLPAARVVSKDDNFTVVTTGEAN-IGLRL 196
Query: 589 LHYPVTISYAVFN 601
H+P+ +++A+F+
Sbjct: 197 RHFPIPLTFAIFD 209
>gi|428170337|gb|EKX39263.1| hypothetical protein GUITHDRAFT_76548 [Guillardia theta CCMP2712]
Length = 277
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N S+ +G A+ V + V A ++ ++V P A+R EG++ + E P S +F
Sbjct: 21 SINRGCFSSADGSAMV--KVGRTVVAAGINLSVVCPSASRGAEGIVRVTVEFGPACSSRF 78
Query: 492 ETGRQTDTSV---MINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLG 548
+ R ++ ++ L + E++ +DL +L + + VW V V + LN+ GNL
Sbjct: 79 QHFRYRKANLKAQALSAHLTRVINEARVVDLSALVMKEDAAVWVVDVHVTCLNHGGNLED 138
Query: 549 CCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+A L+AL + P V + ++ + E D +P+ I +P++ ++A+F+ G
Sbjct: 139 ASMLAVLSALVDTKLPAVEMKENDVM--AEVEGDSVPLVIQSFPISHTFALFDFG 191
>gi|260827200|ref|XP_002608553.1| hypothetical protein BRAFLDRAFT_128829 [Branchiostoma floridae]
gi|229293904|gb|EEN64563.1| hypothetical protein BRAFLDRAFT_128829 [Branchiostoma floridae]
Length = 298
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 41 TTLEQLLEEINFQRAKEKRQYLRNDMFLTQG-TSYWTDLFVRYFLFQTDSNIDCDDLLFF 99
++L +L I +R++ +R F+ ++WT +F Y L + S+ DD+LFF
Sbjct: 16 SSLHNMLSSIKRERSRVQRGDSGEGGFVVLAINTFWTKVFSEY-LVDSGSDDLRDDMLFF 74
Query: 100 VRKKYIKTSSRNLPKFETEVEVFRKDSRKLPI-GDPDVDWEETVYLNMIIHQ 150
+RK I + P TEV+V+R+DS++LP GDP +DWEETVYLN+I+ Q
Sbjct: 75 IRK--ISHARDQQPV--TEVDVYRRDSKRLPSPGDPSIDWEETVYLNLILQQ 122
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Query: 83 FLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLPI-GDPDVDWEET 141
+L + S+ DD+LFF+RK I + P TEV+V+R+DS++LP GDP +DWEET
Sbjct: 127 YLVDSGSDDLRDDMLFFIRK--ISHARDQQPV--TEVDVYRRDSKRLPSPGDPSIDWEET 182
Query: 142 VYLNMIIHQ 150
VYLN+I+ Q
Sbjct: 183 VYLNLILQQ 191
>gi|226372912|gb|ACO52081.1| Exosome complex exonuclease RRP43 [Rana catesbeiana]
Length = 272
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE R +F ++ N SI+ +G A+ + V+ + P P
Sbjct: 17 FLKEKCRPDGRDLSEFRTTTINVGSITTADGSALV--KIGNCTVICGIKAEFATPPIDAP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G + N EL+P+ SP+F G + + + ++F+ + S+ I E LC+ + W
Sbjct: 75 NKGYIVPNVELTPLCSPRFRPGPPGEEAQVASQFIADVIENSQMILKEDLCIENGKLAWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTIL 589
+ DL L+Y GNLL C A +A+L + R P V TG + S + I
Sbjct: 135 LYCDLICLDYGGNLLDTCMCALVASLRNARLPSVKINEETGLAQVNLSTRNA----LKIH 190
Query: 590 HYPVTISYAVFN 601
+P++ S+A+F+
Sbjct: 191 KHPLSTSFAIFD 202
>gi|126327460|ref|XP_001368047.1| PREDICTED: exosome complex component RRP43-like [Monodelphis
domestica]
Length = 276
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SI+ +G A+ + + V+ V P
Sbjct: 17 FLKENCRPDGRELGEFRTTTVNIGSITTADGSALV--KLGNTTVICGVKGEFAAPPVDSL 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N+G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 75 NKGYIVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISHGKLAWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ DL L+YDGN+L C+ A LAAL + + P V ++ + K + I +P
Sbjct: 135 LYCDLICLDYDGNILDACTFALLAALKNVQLPAVI-INEETGLAEVNLKKKSHLNIRTHP 193
Query: 593 VTISYAVFN 601
+ S+A+F+
Sbjct: 194 IATSFAIFD 202
>gi|432896001|ref|XP_004076251.1| PREDICTED: exosome complex component RRP43-like [Oryzias latipes]
Length = 277
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 412 FHFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKAT 470
F KE+ R +F ++ N SIS +G A+ + + V+ + + P
Sbjct: 15 MSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALV--KLGSTTVICGIKAELANPTVE 72
Query: 471 RPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKV 530
P +G + N +L P+ S +F G + + ++F+ + S+ I E LC+ +
Sbjct: 73 APGKGYIVPNVDLPPLCSSRFRPGPPGEQAQASSQFIADVIESSEIIKPEDLCIDRGKLC 132
Query: 531 WNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILH 590
W + D+ L+YDGN+L C IA LAAL + R P VT ++ A K I + H
Sbjct: 133 WVLYCDIMCLDYDGNILDACIIALLAALKNTRLPKVT-------VNKATCKPEIDLKERH 185
Query: 591 ------YPVTISYAVFN 601
+PV S+ +F
Sbjct: 186 ELPVHKHPVGTSFCIFQ 202
>gi|379003147|ref|YP_005258819.1| RNase PH-related exoribonuclease [Pyrobaculum oguniense TE7]
gi|375158600|gb|AFA38212.1| RNase PH-related exoribonuclease [Pyrobaculum oguniense TE7]
Length = 276
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V + P P+EG+L ++AE+ P ASP E G ++++ + R +++ +
Sbjct: 62 THVIAGVKVGLGQPFPDAPDEGVLVVSAEVLPHASPYTEVGPPDESAIELARVVDRGIRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D + L V K + + VDL ++N DGNL+ ++A++AAL + + P V
Sbjct: 122 CGYVDFKKLAVEG-GKAYVLWVDLYIINDDGNLVDAANLASVAALKNTQLPAVVKDESGA 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV---PGFTECIQLD--TALALSQDR 628
+ K P+P+ PV +S G + + P F E + LD +S+DR
Sbjct: 181 VKLDRNNKSPLPLETSKVPVAVSV-----GKIANVLFLDPNFEEELSLDGRVTFTISEDR 235
>gi|340377723|ref|XP_003387378.1| PREDICTED: exosome complex component RRP42-like [Amphimedon
queenslandica]
Length = 281
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +L V + P PN+G + + S +ASP+FE R D + L ++
Sbjct: 56 TNILVGVKAEIGQPNPLNPNKGRIEFFVDCSALASPKFEGRRGEDLGRNLAHRLSDLYEN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT 567
S CIDLESL ++ + W + VD VL Y G +L C SIA ALA+ + P +T
Sbjct: 116 SNCIDLESLSIIPGQDCWIIYVDALVLEYSGGVLDCLSIAVKGALANTKIPKLT 169
>gi|318083345|ref|NP_001187695.1| exosome complex exonuclease rrp43 [Ictalurus punctatus]
gi|308323723|gb|ADO28997.1| exosome complex exonuclease rrp43 [Ictalurus punctatus]
Length = 277
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 414 FWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SIS +G A+ + + V+ + + P A P
Sbjct: 17 FLKENCRPDGRELGEFRPTTLNTGSISTADGSALV--KIGNATVICGIKAELATPTADAP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
++G + N +L P+ S +F G + + + ++F+ +S I E LC+ + W
Sbjct: 75 DKGYIVPNVDLPPLCSSRFRPGPPGEQAQVASQFIADIIDDSNIIKKEDLCIGKSKLCWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ D+ L+YDGNL C I LAAL + + P VT + + + + I +P
Sbjct: 135 LYCDIMCLDYDGNLPDACIITLLAALKNAQLPKVT-INKETDLPEVDVQHKRHLQINKHP 193
Query: 593 VTISYAVFN 601
V S+AVF+
Sbjct: 194 VASSFAVFD 202
>gi|374325947|ref|YP_005084147.1| exosome complex RNA-binding protein Rrp42 [Pyrobaculum sp. 1860]
gi|356641216|gb|AET31895.1| exosome complex RNA-binding protein Rrp42 [Pyrobaculum sp. 1860]
Length = 273
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V + P P+EG+L +NAE+ P ASP E G ++++ + R +++ +
Sbjct: 62 THVVAGVKVGLGQPFPDAPDEGVLVVNAEVLPHASPYTEVGPPDESAIELARVVDRGIRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D + L VV K + + +DL V+N DGNL+ ++A++AAL + + P
Sbjct: 122 CGYVDFKKL-VVEGGKAYILWIDLYVINDDGNLVDAANLASVAALKNTQLPTAVKDEAGA 180
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV---PGFTECIQLDTALALSQDRQK 630
+ K P+P+ + PV S G G+ + P F E + LD + + K
Sbjct: 181 VKLDRNNKLPLPVDVAKAPVAASV-----GKIGNVLFLDPTFEEELSLDGRITFTFSEDK 235
Query: 631 L 631
+
Sbjct: 236 I 236
>gi|223945461|gb|ACN26814.1| unknown [Zea mays]
gi|413921676|gb|AFW61608.1| exosome complex exonuclease RRP43 [Zea mays]
Length = 306
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
++S+ +G A+ V + +LA V ++ P A P+EG + + + P+ SP GR
Sbjct: 58 AVSSAHGSALV--RVGDTAMLASVKLEVMSPSAEYPDEGSVSVEFHMPPICSPLVRPGRS 115
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ + +I++ LE S+ ++L+ LC++ + W +D+ LN DG+L I+A+A
Sbjct: 116 AEVAPVISKALEDVLMSSRMLNLKDLCLITGKASWLAYLDIYCLNADGSLFDAALISAVA 175
Query: 557 ALAHFRHPDVTSTGD 571
A H P + S GD
Sbjct: 176 AFTHLEIP-LVSVGD 189
>gi|390474971|ref|XP_002807638.2| PREDICTED: exosome complex component RRP42 [Callithrix jacchus]
Length = 291
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 61/119 (51%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M +PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGMPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ A E W + VD+ +L DGNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISAREHCWVLYVDVLLLECDGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|403418833|emb|CCM05533.1| predicted protein [Fibroporia radiculosa]
Length = 286
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 422 QDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINA 481
++W DV S N SIS +G A+ + + ++ V + P+ P +G L N
Sbjct: 46 EEWRDV----SVNVGSISTADGSALV--RLGDTTIVCGVKAEIAEPELDSPGDGFLVPNL 99
Query: 482 ELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLN 541
+L + SP+F+ G T+ + +++ L + S + SLC+ + VW + VD +N
Sbjct: 100 DLPAICSPKFKPGPPTEEAQVLSDRLNEALIASGILPTSSLCIARGKAVWVLYVDATCIN 159
Query: 542 YDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPVTISYA 598
YDGN +A +AAL + + P+ T TG + + K P+ + P ++S+
Sbjct: 160 YDGNAFDATLLAMVAALKNTQLPEATYDEETGRT----TCSRKVKQPLQLGRSPTSMSFG 215
Query: 599 VFNGGSEGSTVPGFTECIQLDTALALSQD 627
+F+ + F E + LDT L++ D
Sbjct: 216 IFDSTHVLADPTSFEEPL-LDTTLSVVVD 243
>gi|156553642|ref|XP_001600402.1| PREDICTED: exosome complex component RRP43-like [Nasonia
vitripennis]
Length = 277
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N SI+ + AV+ + + V+ + + PKA P+ G + N +LSP++S +F
Sbjct: 36 SVNIGSITQADSSAVF--KIGNTSVVCGIKAELASPKAETPDCGFIIPNVDLSPLSSSKF 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G + + + +E+ S+ +DL+ LC+ ++ VW + DL ++YDG+++ C
Sbjct: 94 RPGPPGEETQCATKLVERILVNSEAVDLKDLCIHKDKLVWVLYCDLICIDYDGSVIDACI 153
Query: 552 IAALAALAHFRHPDVTSTGDQIIIHSAA----EKDPIPMTILHYPVTISYAVFN 601
A +AA P V T I + A +K+ I + + P + ++A+F+
Sbjct: 154 GALVAAFKILTLPVVEYT-----IETGATKVDDKNRISVPLRQLPASTTFAIFD 202
>gi|298705981|emb|CBJ29102.1| similar to exosome component 6 [Ectocarpus siliculosus]
Length = 274
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
+S E +A + ++VLA +S + P P G+L + +L+P++S +F +GR +
Sbjct: 43 LSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPS 102
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAA 557
+ + +++ F++ ES + L L + W + +D+ L++DGNL IAA+ A
Sbjct: 103 EQAHVLSTFVKNSIVESGALVLTDLAIDDGAFAWKLCMDIVCLSFDGNLADATLIAAMGA 162
Query: 558 LAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNG 602
L + P D+I + E P + + PV ++ VF+G
Sbjct: 163 LMRLQLPGTRRIDDEIFV---TEDTPTQLVVREVPVPLTCGVFDG 204
>gi|148703326|gb|EDL35273.1| exosome component 8, isoform CRA_b [Mus musculus]
Length = 212
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVA 526
P P+ G + N +L P+ S +F TG + + + ++F+ S+ I E LC+
Sbjct: 5 PPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISP 64
Query: 527 EEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPM 586
+ W + DL L+YDGN+L C+ A LAAL + + P+VT + + +K +
Sbjct: 65 GKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY-L 123
Query: 587 TILHYPVTISYAVFN 601
+ PV S+AVF+
Sbjct: 124 NVRTNPVATSFAVFD 138
>gi|356526509|ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
Length = 302
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 389 DMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWC 448
D+ E++ A+ L+ +R F + H + + +S ++++ NG A+
Sbjct: 9 DLSSEMEVDAFRRLFPLRYFER--HLAESIRPDGRPLGKARETSIFLGAVASANGSALV- 65
Query: 449 PWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLE 508
+ + +L + ++ P P+EG L I+ + P+ SP GR + S ++++ L
Sbjct: 66 -KIGSTTILTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLS 124
Query: 509 KCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
SK IDL+ L +V+ + W +D+ L+ DG L ++A+A+L+H + P V
Sbjct: 125 DTISSSKMIDLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVASLSHLQIPVVAM 184
Query: 569 TGDQIII 575
D I+
Sbjct: 185 NDDGKIV 191
>gi|73669985|ref|YP_306000.1| exosome complex RNA-binding protein Rrp42 [Methanosarcina barkeri
str. Fusaro]
gi|72397147|gb|AAZ71420.1| ribosomal RNA-processing protein RRP42 [Methanosarcina barkeri str.
Fusaro]
Length = 260
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V P +EG++ N EL+P+ASP+FE G + ++ + R +++ +E
Sbjct: 55 TQVLVGVKLQPGTPFPDSQDEGVIITNLELNPIASPEFEPGPPREEAIEMARVVDRGIRE 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLL 547
S ID++ LC+ E VW +D++VLN DGN++
Sbjct: 115 SGAIDIKKLCISVGESVWIAYIDVHVLNDDGNII 148
>gi|389740648|gb|EIM81838.1| hypothetical protein STEHIDRAFT_171488 [Stereum hirsutum FP-91666
SS1]
Length = 287
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 413 HFWKESKRAQ-----DWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
F ES R DW D+ S N SI NG ++ + + ++ V + P
Sbjct: 32 RFIAESVRPDGRTFDDWRDL----SVNVGSIGTANGSSLV--RLGDTTIVCGVKAEIAEP 85
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
RP+EG + N +L P+ SP+F+ G +D + ++ L S + L SLC+
Sbjct: 86 DLDRPDEGWIVPNIDLPPICSPKFKPGPPSDEAQALSDRLFDSLTSSNVLPLSSLCIEPG 145
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPI-PM 586
+ W + VD +NYDGN+ +A ++AL + P T D + +K+ + P+
Sbjct: 146 KSAWVLYVDATCINYDGNVFDAALVAMVSALKNTLLPKATFDPDTERTTCSRKKELMSPL 205
Query: 587 TILH-YPVTISYAVFN 601
+ P+++S+ +F+
Sbjct: 206 ELSEGLPISLSFGLFD 221
>gi|47227071|emb|CAG00433.1| unnamed protein product [Tetraodon nigroviridis]
Length = 275
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 413 HFWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R ++F ++ N SIS +G A+ V + ++ + + P
Sbjct: 16 RFLKENCRPDGRELLEFRPTTLNIGSISTADGSALV--KVGNTTIICGIKAELANPTVEA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P +G + N +L P+ S +F G + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PGKGYIVPNVDLPPLCSSRFRPGPPGEQAQACSQFIADLIESSEIIQPEDLCIERGKLCW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHY 591
+ DL L+YDGNL C IA LAAL + P+ + + + EK + I +
Sbjct: 134 VLYCDLMCLDYDGNLRDACVIALLAALKITQLPEAIISTETCLPVVDLEKKR-GLNIRKH 192
Query: 592 PVTISYAVFN 601
PV S+ +F+
Sbjct: 193 PVGSSFCIFD 202
>gi|397621033|gb|EJK66068.1| hypothetical protein THAOC_13033 [Thalassiosira oceanica]
Length = 583
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 44/177 (24%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGR-------------------------QTDTSV 501
P A RPN+G + E+ PM +E Q S
Sbjct: 83 PNADRPNDGQVKFTVEVGPMGCMGYEVVDRPVSNYSEQGGGGGGGGGSGDVPYVQRLKSN 142
Query: 502 MINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHF 561
I R LE+ +D E+LCV + VW + VD+++L+ GN L C +AA++AL H+
Sbjct: 143 SILRILERTLLIGGAMDAEALCVQSGTWVWRLCVDVSLLDDGGNALDACVLAAVSALRHY 202
Query: 562 RHP----------DVTSTG--------DQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
R P D+T+ G + IIHS +++P P+ + H P+T ++A+F
Sbjct: 203 RLPEVNIGGEVDDDLTTAGGNANNGYQETTIIHS-DDREPTPLPLHHTPLTATFALF 258
>gi|299755052|ref|XP_002912058.1| hypothetical protein CC1G_13591 [Coprinopsis cinerea okayama7#130]
gi|298411047|gb|EFI28564.1| hypothetical protein CC1G_13591 [Coprinopsis cinerea okayama7#130]
Length = 189
Score = 72.4 bits (176), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V MV P RP EG++ I++E+SPMAS ++E GR ++ V I R L+K K
Sbjct: 53 TRVIANVEAKMVKPTPERPFEGIITIHSEISPMASSEYEPGRPSEEEVTITRMLDKVLKR 112
Query: 514 SKCIDLESLCVVAEEK 529
S +D ESLC+ A ++
Sbjct: 113 SDAVDKESLCIQAGQR 128
>gi|407464320|ref|YP_006775202.1| exosome complex RNA-binding protein Rrp42 [Candidatus
Nitrosopumilus sp. AR2]
gi|407047508|gb|AFS82260.1| exosome complex RNA-binding protein Rrp42 [Candidatus
Nitrosopumilus sp. AR2]
Length = 272
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
+I NG A ++ +EV+ V P ++GL AEL P++ P ETG
Sbjct: 42 AIPKANGSARV--FLGDTEVICGVKIQPDRPFPDTGDKGLFICTAELLPLSHPTVETGPP 99
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ + R +++ +ES +D+ L + ++ V V D V++YDGNL CS AA A
Sbjct: 100 QPPVIELARVVDRGIRESHMVDVSQLVIEKDKSVIGVFADNVVVDYDGNLFDACSYAATA 159
Query: 557 ALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTIS 596
AL + P T D ++ + E P+P+T + VT+
Sbjct: 160 ALLTTKTPKWNWTDDSPVL-AEGEDRPLPITTIPVSVTMG 198
>gi|357627282|gb|EHJ77019.1| hypothetical protein KGM_00061 [Danaus plexippus]
Length = 839
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+ + + PKA P+ G L N EL P+ S +F G +D + +++ +
Sbjct: 82 TTVVCGIKLELAKPKAEEPDVGFLITNVELLPLCSSKFRPGPPSDHAQVVSNVVSDIVTN 141
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
SKCID++ LC+V ++ W + D+ L+YDG+++ C I +++L
Sbjct: 142 SKCIDMKDLCIVPDKLSWVLYCDMVCLDYDGSVVDACLITLMSSL 186
>gi|295322022|pdb|3M85|G Chain G, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
gi|295322023|pdb|3M85|H Chain H, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
gi|295322024|pdb|3M85|I Chain I, Archaeoglobus Fulgidus Exosome Y70a With Rna Bound To The
Active Site
Length = 259
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ V P P+ G++ +NAEL P+ASP FE G + S+ + R +++ +E
Sbjct: 56 TQVVVGVKMQPGEPAPDTPDRGVIIVNAELVPLASPTFEPGPPDENSIELARVVDRGIRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
S+ +DL L + EKVW V VD++ L+ DGN
Sbjct: 116 SEAVDLSKLVIEEGEKVWIVFVDIHALDDDGN 147
>gi|302786484|ref|XP_002975013.1| hypothetical protein SELMODRAFT_102800 [Selaginella moellendorffii]
gi|300157172|gb|EFJ23798.1| hypothetical protein SELMODRAFT_102800 [Selaginella moellendorffii]
Length = 288
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCF-- 511
++V+ V + P++ RPN G + + E S A P+FE D ++ ++R L++CF
Sbjct: 54 TDVIVSVKAELGSPRSGRPNYGSIEVMVECSATAGPEFEGRGGEDLNMELSRALQRCFVG 113
Query: 512 ---KESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
IDL +L +VA + W + VD V+N DGNLL SI AAL++ P V
Sbjct: 114 GPSGAGAAIDLSTLGIVASKFCWELFVDCLVVNSDGNLLDALSIG--AALSNTGIPSVKV 171
Query: 569 TGD 571
TG+
Sbjct: 172 TGN 174
>gi|260834769|ref|XP_002612382.1| hypothetical protein BRAFLDRAFT_280121 [Branchiostoma floridae]
gi|229297759|gb|EEN68391.1| hypothetical protein BRAFLDRAFT_280121 [Branchiostoma floridae]
Length = 291
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M P RP EG L + S ASP+FE + ++ ++ L++ F
Sbjct: 58 TDILVGVKAEMGEPDPGRPKEGKLEFFVDCSANASPEFEGRGGEELAIEVSNALQRIFNS 117
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
+DL +LC++ E + W + VD+ VL GNL S+A AAL + R P V T D
Sbjct: 118 KSTLDLTALCIIPEGQCWVLFVDVLVLECGGNLFDAVSLAVKAALFNTRIPTVVVTAD 175
>gi|226494746|ref|NP_001148711.1| exosome complex exonuclease RRP43 [Zea mays]
gi|195621578|gb|ACG32619.1| exosome complex exonuclease RRP43 [Zea mays]
Length = 306
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
++S+ +G A+ V + +LA V ++ P A P+EG + + + P+ SP GR
Sbjct: 58 AVSSAHGSALV--RVGDTAMLASVKLEVMSPSAEYPDEGSVSVEFHMPPICSPLVRPGRS 115
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ + +I++ LE S+ ++L+ LC++ + W +D+ LN DG+L I+A++
Sbjct: 116 AEVAPVISKALEDVLMSSRMLNLKDLCLITGKASWLAYLDIYCLNADGSLFDAALISAVS 175
Query: 557 ALAHFRHPDVTSTGD 571
A H P + S GD
Sbjct: 176 AFTHLEIP-LVSVGD 189
>gi|148236233|ref|NP_001086766.1| exosome component 7 [Xenopus laevis]
gi|50418038|gb|AAH77415.1| Exosc7-prov protein [Xenopus laevis]
Length = 291
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 59/122 (48%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ ++VL V M PK RP EG L + S A+P+FE + I L K
Sbjct: 53 IGHTDVLVGVKAEMGTPKLERPGEGYLEFFVDCSANAAPEFEGRGGEELGTEIAFMLYKI 112
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG 570
F IDLESLC+ A E W + VD+ +L GNL S+A AAL + R P V
Sbjct: 113 FDNRSSIDLESLCIQAREHCWVLYVDVLLLECGGNLFDTISVAVKAALFNARIPKVRVLE 172
Query: 571 DQ 572
D+
Sbjct: 173 DE 174
>gi|11498105|ref|NP_069330.1| exosome complex RNA-binding protein Rrp42 [Archaeoglobus fulgidus
DSM 4304]
gi|29336575|sp|O29756.1|ECX2_ARCFU RecName: Full=Probable exosome complex exonuclease 2
gi|83754328|pdb|2BA0|I Chain I, Archaeal Exosome Core
gi|83754329|pdb|2BA0|H Chain H, Archaeal Exosome Core
gi|83754330|pdb|2BA0|G Chain G, Archaeal Exosome Core
gi|83754337|pdb|2BA1|G Chain G, Archaeal Exosome Core
gi|83754338|pdb|2BA1|H Chain H, Archaeal Exosome Core
gi|83754339|pdb|2BA1|I Chain I, Archaeal Exosome Core
gi|295322010|pdb|3M7N|G Chain G, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
gi|295322011|pdb|3M7N|H Chain H, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
gi|295322012|pdb|3M7N|I Chain I, Archaeoglobus Fulgidus Exosome With Rna Bound To The
Active Site
gi|2650132|gb|AAB90743.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 259
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ V P P+ G++ +NAEL P+ASP FE G + S+ + R +++ +E
Sbjct: 56 TQVVVGVKMQPGEPYPDTPDRGVIIVNAELVPLASPTFEPGPPDENSIELARVVDRGIRE 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
S+ +DL L + EKVW V VD++ L+ DGN
Sbjct: 116 SEAVDLSKLVIEEGEKVWIVFVDIHALDDDGN 147
>gi|350413287|ref|XP_003489947.1| PREDICTED: exosome complex component RRP42-like [Bombus impatiens]
Length = 291
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + + +P A RPNEG L + S A+P FE D + I+ L ++
Sbjct: 56 TDILVGIKIELDVPHADRPNEGKLEFFVDCSATATPAFEGKGGDDLATEISNILTAAYQT 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---- 569
DL +LC++ +K W + VD+ +L GNL I AAL P +T+
Sbjct: 116 RNAFDLRTLCILPHKKCWKIYVDILILQCGGNLFDAVGITVKAALNSTEIPKITAATLDG 175
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTIS 596
G+ I S D I + +YP+ ++
Sbjct: 176 GEPDIELSDDAYDCIQLDTSNYPIIVT 202
>gi|198424385|ref|XP_002127184.1| PREDICTED: similar to Exosome complex exonuclease RRP42 (Ribosomal
RNA-processing protein 42) (Exosome component 7) (p8)
[Ciona intestinalis]
Length = 290
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
SE+L V + P PNEGL+ + + SP A P F+ D S I+ L + +
Sbjct: 56 SELLVGVKVELGSPDPKAPNEGLIHFHVDCSPNADPSFQGRGGEDLSANISCILTRIYCN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST-GDQ 572
IDL +L ++ ++ W V VD+ +L GNLL SIA AAL + P++ T GD+
Sbjct: 116 KSSIDLNTLGIIPHKQCWVVHVDVLILECGGNLLDAVSIAVKAALHNTGVPNIQVTDGDE 175
>gi|242082071|ref|XP_002445804.1| hypothetical protein SORBIDRAFT_07g026060 [Sorghum bicolor]
gi|241942154|gb|EES15299.1| hypothetical protein SORBIDRAFT_07g026060 [Sorghum bicolor]
Length = 306
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
++S+ +G A+ + + +LA V ++ P A P+EG + + + P+ SP GR
Sbjct: 58 AVSSAHGSALV--RLGDTAMLASVKLEVMSPPAEHPDEGSVAVEFHMPPICSPLVRPGRS 115
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ + +I++ LE S ++L+ LC++ + W +D+ LN DG+L I+A+A
Sbjct: 116 AEVAPVISKALEDVLMSSGMLNLKDLCLITGKASWLAYLDIYCLNADGSLFDAALISAVA 175
Query: 557 ALAHFRHPDVTSTGD 571
A H P + S GD
Sbjct: 176 AFTHLEIP-LVSVGD 189
>gi|70948509|ref|XP_743754.1| exosome complex exonuclease [Plasmodium chabaudi chabaudi]
gi|56523406|emb|CAH76566.1| exosome complex exonuclease, putative [Plasmodium chabaudi
chabaudi]
Length = 434
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 61/110 (55%)
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
+ + TD + I +E+ FK S ++ ESLC++ +KVW + +++ V+ DGNL C
Sbjct: 16 DISKITDECLEIKNLIERIFKASNILNFESLCIIPYKKVWCLLINITVIENDGNLYDSCY 75
Query: 552 IAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
++A +AL HFR+ V +I E + +++ + P+ ++A FN
Sbjct: 76 LSAYSALVHFRNNSVNIDNAGNVIIDEEEVNYSSLSVHNSPILTTFAYFN 125
>gi|242007204|ref|XP_002424432.1| Exosome complex exonuclease RRP43, putative [Pediculus humanus
corporis]
gi|212507832|gb|EEB11694.1| Exosome complex exonuclease RRP43, putative [Pediculus humanus
corporis]
Length = 276
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S N S +G A+ + + V+ V + PKA P++G L N +L P+ S Q+
Sbjct: 36 SINVNSFHNADGSAIV--KIGNTAVVCGVKLELAKPKAETPDQGYLIPNVDLPPLCSGQY 93
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
+ G D + +F+ + ES+CIDL++LC+V + W + +D+ LN DGN
Sbjct: 94 QPGPPCDYAQEATKFVNEILLESQCIDLKALCIVPDRLAWVIYLDIICLNQDGN 147
>gi|426192626|gb|EKV42562.1| hypothetical protein AGABI2DRAFT_195867 [Agaricus bisporus var.
bisporus H97]
Length = 318
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 420 RAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFI 479
+ + W DV S N SI+ +G A+ + S ++ V + P P+EG L
Sbjct: 54 KGEIWRDV----SINVGSINTADGSALV--RMGGSTIVCGVKAEIAEPDLENPDEGFLVP 107
Query: 480 NAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNV 539
N +L M P+F+ G +D + +++ L + S + +SL V + VW + VD
Sbjct: 108 NVDLPAMCHPKFKPGPPSDEAQVLSERLFETLTSSNFMSPKSLVVHPGKFVWTLYVDATC 167
Query: 540 LNYDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NYDGN+ IA ++AL + R P TG + + P+ + P+ S
Sbjct: 168 INYDGNVFDATLIAMVSALLNTRLPKAVYNEDTGQTMCYRESTS----PLALFGLPLPTS 223
Query: 597 YAVFN 601
+ +F+
Sbjct: 224 FGIFD 228
>gi|328866292|gb|EGG14677.1| hypothetical protein DFA_10935 [Dictyostelium fasciculatum]
Length = 282
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ +L + ++ P PN+G L + + P ASP++E ++ + + LE+ K+
Sbjct: 56 THILVGIKADISAPDPLTPNKGSLTFSVDCCPSASPEYEGKGADYINIELAKQLERVMKD 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
S +DL LC++ + WN+ +D VL+ GNL SI AALA+ R P + T
Sbjct: 116 SNSMDLGGLCIMPGKYCWNLYIDAIVLDSGGNLFDALSIGVRAALANTRLPTIRIT 171
>gi|281202081|gb|EFA76286.1| hypothetical protein PPL_10049 [Polysphondylium pallidum PN500]
Length = 1016
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL + ++ P +PN G+L + E P ASP+FE ++ + + LE+ +
Sbjct: 809 THVLVGIKADIGAPTTDKPNSGVLNYSVECCPSASPEFEGKGAEQLNIELAKQLERMLEN 868
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
S +DLESL +V WN+ +D VL+ DGNL SI AAL + R P +
Sbjct: 869 S--LDLESLVIVPGRYCWNLHIDATVLDSDGNLFDALSIVTRAALFNTRLPTI 919
>gi|302791331|ref|XP_002977432.1| hypothetical protein SELMODRAFT_106958 [Selaginella moellendorffii]
gi|300154802|gb|EFJ21436.1| hypothetical protein SELMODRAFT_106958 [Selaginella moellendorffii]
Length = 288
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCF-- 511
++++ V + P++ RPN G + + E S A P+FE D ++ ++R L++CF
Sbjct: 54 TDLIVSVKAELGSPRSCRPNYGSIEVMVECSATAGPEFEGRGGEDLNMELSRALQRCFVG 113
Query: 512 ---KESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
IDL +L +VA + W + VD V+N DGNLL SI AAL++ P V
Sbjct: 114 GPSGAGAAIDLSTLGIVASKFCWELFVDCLVVNSDGNLLDALSIG--AALSNTGIPSVKV 171
Query: 569 TGD 571
TG+
Sbjct: 172 TGN 174
>gi|409079432|gb|EKM79793.1| hypothetical protein AGABI1DRAFT_38968 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 352
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 420 RAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFI 479
+ + W DV S N SI+ +G A+ + S ++ V + P P+EG L
Sbjct: 54 KGEIWRDV----SINVGSINTADGSALV--RMGGSTIVCGVKAEIAEPDLENPDEGFLVP 107
Query: 480 NAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNV 539
N +L M P+F+ G +D + +++ L + S + +SL V + VW + VD
Sbjct: 108 NVDLPAMCHPKFKPGPPSDEAQVLSERLFETLTSSNFMSPKSLVVHPGKFVWTLYVDATC 167
Query: 540 LNYDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPVTIS 596
+NYDGN+ IA ++AL + R P TG + + P+ + P+ S
Sbjct: 168 INYDGNVFDATLIAMVSALLNTRLPKAVYNEDTGQTMCYRESTS----PLALFGLPLPTS 223
Query: 597 YAVFN 601
+ +F+
Sbjct: 224 FGIFD 228
>gi|358058357|dbj|GAA95876.1| hypothetical protein E5Q_02533 [Mixia osmundae IAM 14324]
Length = 280
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 432 SENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
S + S++ +G ++ V + ++ V P RP+EG L INAEL P+AS QF
Sbjct: 45 SSDTGSVTTADGSSLV--RVGQTTMMCTVRVETAEPDLMRPDEGFLIINAELMPIASSQF 102
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
+G +D + ++ L + S + L L + + V V VD+ L++DGN L
Sbjct: 103 LSGPPSDDAQVLASRLRQVISSSNMLPLRKLGIRRAKAVLVVYVDVACLSFDGNALDVAV 162
Query: 552 IAALAALAHFRHPDVT--STGDQIIIHSAAEKDPIPMTILHYPV-TISYAVFN 601
+A AL R P +T +++I ++ ++P+ ++ PV T S+A+F
Sbjct: 163 MAVTQALYSARIPVITFEEENNRVIASASLPREPLKLS---EPVLTCSFALFG 212
>gi|348541677|ref|XP_003458313.1| PREDICTED: exosome complex component RRP43-like [Oreochromis
niloticus]
Length = 277
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 414 FWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R +F ++ N SIS +G A+ + + ++ + + P P
Sbjct: 17 FLKENCRPDGRELTEFRTTTLNIGSISTADGSALV--KLGNTTIICGIKAELANPTVEAP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
+G + N +L P+ S +F G + + ++F+ + S+ I E L + + W
Sbjct: 75 GKGYIVPNVDLPPLCSSRFRPGPPGEEAQAASQFIADVIESSEVIKTEDLSIDRGKLCWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT 567
+ DL L+YDGN+L C IA LAAL + R P+VT
Sbjct: 135 LYCDLMCLDYDGNILDACVIALLAALKNTRLPEVT 169
>gi|380023350|ref|XP_003695486.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex component
RRP42-like [Apis florea]
Length = 290
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + + IP A +PNEG L + S A+P FE D + I+ L ++
Sbjct: 56 TDILVGIKVELDIPHADKPNEGKLEFFVDCSATATPAFEGKGGDDLATEISNILTAAYQT 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---- 569
DL +LC++ +K W + VD+ +L GNL I AAL P +T+
Sbjct: 116 RNAFDLRTLCILPHKKCWKIYVDVLILQCGGNLFDAVGITVKAALNSTEIPKITAATLDG 175
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTIS 596
G+ I S D I + +YP+ ++
Sbjct: 176 GEPDIELSDDPYDCIQLDTSNYPIIVT 202
>gi|335296834|ref|XP_001927006.3| PREDICTED: LOW QUALITY PROTEIN: exosome complex component
RRP43-like [Sus scrofa]
Length = 246
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SI +G ++ + + V+ + P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNVGSIGTADGSSLV--KLGNTTVICGIKAEFGAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +LSP+ S +F +G + + + ++F+ S+ I E LC+ + W
Sbjct: 74 PDKGYIVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIXNSQIIQKEDLCISPGKLAW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKD 582
+ DL LN+DGN+L C+ A LAAL + + P+V ++I E++
Sbjct: 134 VLYCDLICLNHDGNILDACTFALLAALKNVQLPEVNINXXTLLIVDPTEEE 184
>gi|301109940|ref|XP_002904050.1| exosome complex exonuclease RRP43, putative [Phytophthora infestans
T30-4]
gi|262096176|gb|EEY54228.1| exosome complex exonuclease RRP43, putative [Phytophthora infestans
T30-4]
Length = 283
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL + + P P++G L I LSP+ S +F GR ++ + I L +
Sbjct: 69 TSVLTAIKLAVGTPAVATPDQGELAIQVHLSPLCSNRFTVGRPSEEAQSIGSQLTRVIAG 128
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +++ESL +V + W + VD+ +++DGN+L + +AAL + P +
Sbjct: 129 SRVVEMESLSIVKGQSAWKLMVDVYGVDHDGNVLDAALTSIIAALKTLKLPATSVNEVDN 188
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN--------GGSEGSTVPGFTECIQLDTALALS 625
++ + D P+ + H S+A+ + EG + F+ L+ S
Sbjct: 189 VVSIVPDGDATPLRVEHGAYATSFAMVDDVVLIDPTSAEEGLSSAVFS--------LSYS 240
Query: 626 QDRQKLGVDSAYANLV 641
D Q GV A ++V
Sbjct: 241 TDGQLCGVHKAGGSIV 256
>gi|349603366|gb|AEP99224.1| Exosome complex exonuclease RRP43-like protein, partial [Equus
caballus]
Length = 197
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 480 NAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNV 539
N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W + DL
Sbjct: 3 NVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAWVLYCDLIC 62
Query: 540 LNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAV 599
L+YDGN+L C+ A LAAL + + P+VT + + + +K + I +PV S+AV
Sbjct: 63 LDYDGNILDACTFALLAALKNVQLPEVTISEETALAEVNLKKKSF-LNIRTHPVATSFAV 121
Query: 600 FN 601
F+
Sbjct: 122 FD 123
>gi|357613811|gb|EHJ68730.1| putative exosome component 8 [Danaus plexippus]
Length = 139
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVA 526
PKA P+ G L N EL P+ S +F G +D + +++ + SKCID++ LC+V
Sbjct: 21 PKAEEPDVGFLITNVELLPLCSSKFRPGPPSDHAQVVSNVVSDIVTNSKCIDMKDLCIVP 80
Query: 527 EEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
++ W + D+ L+YDG+++ C I +++L
Sbjct: 81 DKLSWVLYCDMVCLDYDGSVVDACLITLMSSL 112
>gi|426249669|ref|XP_004018572.1| PREDICTED: exosome complex component RRP42 [Ovis aries]
Length = 291
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASAAPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
IDL+SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSIDLKSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|321458150|gb|EFX69223.1| hypothetical protein DAPPUDRAFT_301019 [Daphnia pulex]
Length = 276
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SI +G A+ + V+ + + P+ P++G + N L + S Q ++
Sbjct: 38 NAGSIGTADGSAIV--KCGNTTVICGIKAELAAPEREEPSKGFIIPNVTLPSLCSSQIKS 95
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G +T+ +F+ + + +DLE+LC+ + W + DL +N DG+LL C +A
Sbjct: 96 GPPGETAQAATQFIAELVNNNIIMDLETLCIKVSKWAWVLHCDLLCINLDGSLLDACVMA 155
Query: 554 ALAALAHFRHPDVTSTGDQI--IIHSAAEKDPIPMTILHYPVTISYAVFNGG 603
+AAL + + P + S +++ +I + EK + + PVT ++++F+ G
Sbjct: 156 LVAALKNLKLP-IVSYDEEMDKLISNPDEK--MGFDTIKQPVTSTFSLFDNG 204
>gi|349602645|gb|AEP98722.1| Exosome complex exonuclease RRP42-like protein, partial [Equus
caballus]
Length = 283
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 48 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANALYRIFNN 107
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 108 KSSVDLKSLCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 166
>gi|340708517|ref|XP_003392871.1| PREDICTED: exosome complex component RRP42-like isoform 1 [Bombus
terrestris]
gi|340708519|ref|XP_003392872.1| PREDICTED: exosome complex component RRP42-like isoform 2 [Bombus
terrestris]
Length = 291
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + + +P A R NEG L + S A+P FE D + I+ L ++
Sbjct: 56 TDILVGIKIELDVPHADRSNEGKLEFFVDCSATATPAFEGKGGDDLATEISNILTAAYQT 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---- 569
DL +LC++ +K W + VD+ +L GNL IA AAL P +T+
Sbjct: 116 PNAFDLRTLCILPHKKCWKIYVDILILQCGGNLFDAVGIAVKAALNSTEIPKITTATLDG 175
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTIS 596
G+ I S D I + +YP+ ++
Sbjct: 176 GEPDIELSDDAYDCIQLDTSNYPIIVT 202
>gi|113197990|gb|AAI21334.1| hypothetical LOC496941 [Xenopus (Silurana) tropicalis]
Length = 291
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 56/116 (48%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ ++VL V M PK RP EG L + S A+P+FE + I L K
Sbjct: 53 IGHTDVLVGVKAEMGTPKLERPGEGYLEFFVDCSANATPEFEGRGGEELGAEIAFMLYKI 112
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
F IDLESLC+ E W + VD+ +L GNL S+A AAL + R P V
Sbjct: 113 FDNRSSIDLESLCIQEREHCWVLYVDVLLLECGGNLFDTISVAVKAALFNARIPKV 168
>gi|226372666|gb|ACO51958.1| Exosome complex exonuclease RRP42 [Rana catesbeiana]
Length = 291
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 59/121 (48%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ ++VL V M PK RP EG L + S A+P+FE + I L K
Sbjct: 53 IGHTDVLVGVKAEMSTPKLDRPCEGYLEFFVDCSANATPEFEGRGGEELGTEIANMLYKV 112
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG 570
F IDLESLC++ E W + +D+ +L+ G+L SI AAL + R P V+
Sbjct: 113 FDNKSSIDLESLCILPREHCWTLYIDVLLLHCGGSLFDTISIGVKAALFNTRIPKVSVLE 172
Query: 571 D 571
D
Sbjct: 173 D 173
>gi|403268453|ref|XP_003926289.1| PREDICTED: exosome complex component RRP42 [Saimiri boliviensis
boliviensis]
Length = 291
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPDFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L DGNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECDGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|449549379|gb|EMD40344.1| hypothetical protein CERSUDRAFT_148276 [Ceriporiopsis subvermispora
B]
Length = 291
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 14/214 (6%)
Query: 417 ESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGL 476
+ + +W DV S + SIS +G A+ + + ++ V + P+ P G
Sbjct: 45 DGRELDEWRDV----SVHVGSISTADGSALV--RLGDTTIVCGVKAEIAEPELDSPEAGF 98
Query: 477 LFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVD 536
+ N +L + SP+F+ G T+ + +I+ L + + + SLC+ + W + +D
Sbjct: 99 IVPNLDLPAICSPKFKPGPPTEEAQVISDRLNEVLVTAGIVSPSSLCIQPGKAAWVLYID 158
Query: 537 LNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILHYPV 593
+NYDGN +A +AAL + R P G + E P+ I P
Sbjct: 159 ATCINYDGNAFDATLLAMVAALKNTRLPKARFDEEAGRTVCSRKVKE----PLHIGRLPT 214
Query: 594 TISYAVFNGGSEGSTVPGFTECIQLDTALALSQD 627
+++ +F+G S F E + LDT L+++ D
Sbjct: 215 AMTFGIFDGTHVLSDPTSFEEPL-LDTVLSVTVD 247
>gi|440905791|gb|ELR56125.1| Exosome complex exonuclease RRP42, partial [Bos grunniens mutus]
Length = 273
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 38 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 97
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
IDL+SLC+ E W + VD+ +L GNL S+A AAL + R P V D+
Sbjct: 98 KSSIDLKSLCISPREHCWVLYVDVLLLECGGNLFDAISVAVKAALFNTRIPRVRVLEDE 156
>gi|108864299|gb|ABG22460.1| 3' exoribonuclease family domain 1-containing protein, putative,
expressed [Oryza sativa Japonica Group]
gi|215706902|dbj|BAG93362.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736842|dbj|BAG95771.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185641|gb|EEC68068.1| hypothetical protein OsI_35924 [Oryza sativa Indica Group]
gi|222615895|gb|EEE52027.1| hypothetical protein OsJ_33746 [Oryza sativa Japonica Group]
Length = 306
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 388 GDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFM-SSENWTSISAENGEAV 446
G + E++ AY L+ + F + +ES R + ++ ++S+ +G A+
Sbjct: 11 GGLAGEMEVEAYRRLFPL-AFLE--RHLRESVRPDARRPAEARPTTVALAAVSSAHGSAL 67
Query: 447 WCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRF 506
+ + +LA + ++ P P+EG + + + P+ SP GR + + +I++
Sbjct: 68 V--RLGDTAMLASIKLEVMSPSGEAPDEGSIAVEFHMPPICSPLVRPGRPAEVAPVISKN 125
Query: 507 LEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
LE S ++L+ LC+++ + W +D+ LN DG+L I+A+AA H P +
Sbjct: 126 LEDILMSSGMLNLKELCLISGKASWLAYLDVYCLNADGSLFDAALISAVAAFTHLEIP-L 184
Query: 567 TSTGD 571
S GD
Sbjct: 185 VSVGD 189
>gi|358418234|ref|XP_003583876.1| PREDICTED: exosome complex component RRP42-like [Bos taurus]
gi|359078399|ref|XP_003587703.1| PREDICTED: exosome complex component RRP42-like [Bos taurus]
Length = 291
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
IDL+SLC+ E W + VD+ +L GNL S+A AAL + R P V D+
Sbjct: 116 KSSIDLKSLCISPREHCWVLYVDVLLLECGGNLFDAISVAVKAALFNTRIPRVRVLEDE 174
>gi|431905092|gb|ELK10147.1| Exosome complex exonuclease RRP42 [Pteropus alecto]
Length = 311
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 415 WKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNE 474
WKE R D+ E T + + + + +++L V M P+ +PNE
Sbjct: 38 WKEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVK-LGHTDILVGVKAEMGAPRLDKPNE 96
Query: 475 GLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVR 534
G L + S A+P+FE D I L + F +DL+SLC+ E W +
Sbjct: 97 GYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKSLCISPREHCWILY 156
Query: 535 VDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
VD+ +L GNL SIA AAL + R P V D+
Sbjct: 157 VDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 194
>gi|19113177|ref|NP_596385.1| exosome subunit Rrp43 (predicted) [Schizosaccharomyces pombe 972h-]
gi|1723274|sp|Q10205.1|RRP43_SCHPO RecName: Full=Exosome complex component rrp43; AltName:
Full=Ribosomal RNA-processing protein 43
gi|3451295|emb|CAA20427.1| exosome subunit Rrp43 (predicted) [Schizosaccharomyces pombe]
Length = 270
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 438 ISAENGEAVWCPWVKPSE--VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGR 495
IS NG A+ ++ E + + + P PNEG + N ELSP+ S +F+ G
Sbjct: 54 ISTANGSAI----IRAGENVFVCGIKAEIAEPFENSPNEGWIVPNLELSPLCSSKFKPGP 109
Query: 496 QTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAAL 555
+D + ++++ L + ++S I+L+SLC+ ++ W + D+ LNYDG+ A
Sbjct: 110 PSDLAQVVSQELHQTLQQSNLINLQSLCIFEKKAAWVLYADIICLNYDGSAFDYAWAALF 169
Query: 556 AALAHFRHP 564
AAL + P
Sbjct: 170 AALKTVKLP 178
>gi|115485229|ref|NP_001067758.1| Os11g0311300 [Oryza sativa Japonica Group]
gi|113644980|dbj|BAF28121.1| Os11g0311300, partial [Oryza sativa Japonica Group]
Length = 300
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 435 WTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETG 494
++S+ +G A+ + + +LA + ++ P P+EG + + + P+ SP G
Sbjct: 50 LAAVSSAHGSALV--RLGDTAMLASIKLEVMSPSGEAPDEGSIAVEFHMPPICSPLVRPG 107
Query: 495 RQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAA 554
R + + +I++ LE S ++L+ LC+++ + W +D+ LN DG+L I+A
Sbjct: 108 RPAEVAPVISKNLEDILMSSGMLNLKELCLISGKASWLAYLDVYCLNADGSLFDAALISA 167
Query: 555 LAALAHFRHPDVTSTGD 571
+AA H P + S GD
Sbjct: 168 VAAFTHLEIP-LVSVGD 183
>gi|338714956|ref|XP_001496279.3| PREDICTED: exosome complex component RRP42-like [Equus caballus]
Length = 291
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKSLCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|417398454|gb|JAA46260.1| Putative exosomal 3'-5' exoribonuclease complex subunit rrp42
[Desmodus rotundus]
Length = 291
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE + I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDELGTEIANTLYRIFHN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DLE+LCV E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLEALCVSPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|322790229|gb|EFZ15228.1| hypothetical protein SINV_06363 [Solenopsis invicta]
Length = 139
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 56/99 (56%)
Query: 460 VSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDL 519
+ + PKA P+ G + N ELSP+ S +F G ++ + ++++ ++ S +DL
Sbjct: 39 IKAELATPKADTPDHGYIVPNVELSPLCSSKFRPGPPSEQAQVLSKLIDIILSNSVALDL 98
Query: 520 ESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
+ LC+ + VW + D+ LNY+G+++ C+ A AAL
Sbjct: 99 KDLCICRNKLVWVLYCDILCLNYNGSVIDACTGAMFAAL 137
>gi|118576718|ref|YP_876461.1| RNase PH-related exoribonuclease [Cenarchaeum symbiosum A]
gi|118195239|gb|ABK78157.1| RNase PH-related exoribonuclease [Cenarchaeum symbiosum A]
Length = 270
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
+ G+ AE+ P+A P ETG + + + R +++ +ES +DL L ++ ++ V
Sbjct: 76 DRGIFICTAEILPLAHPDVETGPPSPAVIELARVVDRGIRESGMVDLSKLVLLKDKSVIG 135
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYP 592
+ D +V++ DGNL CS AA AA+ + P D+ + E P+P+T + P
Sbjct: 136 IFADSSVIDVDGNLFDACSYAATAAILTAKLPK-WEIQDEAPVRIEGET-PVPVTTI--P 191
Query: 593 VTISYAVFNG 602
V+++ A NG
Sbjct: 192 VSVTMAKING 201
>gi|189055112|dbj|BAG38096.1| unnamed protein product [Homo sapiens]
Length = 291
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|357152306|ref|XP_003576076.1| PREDICTED: exosome complex component RRP43-like [Brachypodium
distachyon]
Length = 307
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
++S+ +G A+ + + +LA + ++ P P+EG + + + P+ SP GR
Sbjct: 59 AVSSAHGSALI--RLGDTAMLASIKLEVMSPPTETPDEGSVAVEFHMPPICSPLVRPGRP 116
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ + ++++ LE S I+L+ LC+++ + W +D+ LN DG+L I+A+A
Sbjct: 117 AEMAPVLSKALEDVLMSSGMINLKELCLISGKASWLAYLDVYCLNADGSLFDAALISAVA 176
Query: 557 ALAHFRHPDVTSTGD 571
A H P + S GD
Sbjct: 177 AFTHLEIP-LVSVGD 190
>gi|410950992|ref|XP_003982186.1| PREDICTED: exosome complex component RRP42 [Felis catus]
Length = 291
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKSLCISPREHCWILYVDVLLLECGGNLFDTISIAVKAALFNTRIPRVRVLEDE 174
>gi|83283987|gb|ABC01901.1| 3'-5'-exoribonuclease/RNA binding-like protein [Solanum tuberosum]
Length = 303
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 387 AGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSIS---AENG 443
+ D+ E++ A+ L+ +R Q H K + D + S T+++ +
Sbjct: 7 SSDLYSEMEVDAFRRLFPLRYHEQ--HLLKSVR-----PDARKLGSARDTTLALGAVASA 59
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
E + + +LA + ++ P P+EG + I + P+ SP GR + + +I
Sbjct: 60 EGSALAKIGSTTMLAAIKMEIMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEVASVI 119
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
++ L S IDL+ LC+V + W +D+ L+ DG+L ++ +AA +H
Sbjct: 120 SKQLSDTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGSLFDAALLSTVAAFSHLNI 179
Query: 564 PDVTSTGDQIII 575
P V+ D I+
Sbjct: 180 PVVSLNEDGRIV 191
>gi|122920911|pdb|2NN6|E Chain E, Structure Of The Human Rna Exosome Composed Of Rrp41,
Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
Length = 305
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 70 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 129
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 130 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 188
>gi|392576624|gb|EIW69754.1| hypothetical protein TREMEDRAFT_23063, partial [Tremella
mesenterica DSM 1558]
Length = 236
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 431 SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFI-NAELSPMASP 489
+S N SIS +G ++ + + V+ + + P + P++G L + N +L + SP
Sbjct: 40 ASLNTGSISTADGSSLV--RLGSTTVVCGIKAEIAEPTTSSPDKGYLIVPNVDLPALCSP 97
Query: 490 QFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGC 549
+++ G +D + +++ +L S +DL SLC+V + VW + +D+ +NYDGN
Sbjct: 98 RYKPGPPSDEAQVLSVWLYDLLISSHVVDLSSLCIVPGKAVWALYIDVVCINYDGNAFDA 157
Query: 550 CSIAALAAL 558
+A +AAL
Sbjct: 158 TVLAVMAAL 166
>gi|297837509|ref|XP_002886636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332477|gb|EFH62895.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 302
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N +S +G A+ + + +LA + ++ P P+EG + + + P+ SP
Sbjct: 52 NLGLVSTADGSALA--KIGSTTMLAAIRMEVMTPSTDSPDEGCIALEFHMPPICSPTVRP 109
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
GR D + +I++ L S IDL+ LC+V+ + W +D+ L+ DG L ++
Sbjct: 110 GRPADAAPVISKRLSDTILSSGMIDLKELCLVSGKAAWMGYLDIYCLDADGALFDAALLS 169
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKD 582
A+AA ++ + P V + I+ KD
Sbjct: 170 AVAAFSNLQIPVVALNDNGRIVAITGGKD 198
>gi|189083688|ref|NP_055819.2| exosome complex component RRP42 [Homo sapiens]
gi|322510129|sp|Q15024.3|EXOS7_HUMAN RecName: Full=Exosome complex component RRP42; AltName:
Full=Exosome component 7; AltName: Full=Ribosomal
RNA-processing protein 42; AltName: Full=p8
gi|119585135|gb|EAW64731.1| exosome component 7, isoform CRA_a [Homo sapiens]
gi|119585136|gb|EAW64732.1| exosome component 7, isoform CRA_a [Homo sapiens]
gi|119585137|gb|EAW64733.1| exosome component 7, isoform CRA_a [Homo sapiens]
Length = 291
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|344276339|ref|XP_003409966.1| PREDICTED: exosome complex component RRP42-like [Loxodonta
africana]
Length = 457
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L F
Sbjct: 222 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGAEIANTLYGIFNN 281
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 282 KSSVDLRSLCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTRIPKVRVLEDE 340
>gi|15215485|gb|AAH12831.1| Exosome component 7 [Homo sapiens]
gi|168272912|dbj|BAG10295.1| exosome complex exonuclease RRP42 [synthetic construct]
Length = 291
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|353681756|ref|NP_001238821.1| exosome complex component RRP42 [Pan troglodytes]
gi|410206888|gb|JAA00663.1| exosome component 7 [Pan troglodytes]
gi|410246930|gb|JAA11432.1| exosome component 7 [Pan troglodytes]
gi|410287270|gb|JAA22235.1| exosome component 7 [Pan troglodytes]
gi|410328427|gb|JAA33160.1| exosome component 7 [Pan troglodytes]
Length = 291
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|395843587|ref|XP_003794559.1| PREDICTED: exosome complex component RRP42 [Otolemur garnettii]
Length = 291
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ E W + VD+ +L GNL S+A AAL + R P V D+
Sbjct: 116 KSSVDLKSLCISPREHCWVLYVDVLLLECGGNLFDAISVAVKAALFNTRIPRVRVLEDE 174
>gi|332215753|ref|XP_003257009.1| PREDICTED: exosome complex component RRP42 [Nomascus leucogenys]
gi|332215755|ref|XP_003257010.1| PREDICTED: exosome complex component RRP42 [Nomascus leucogenys]
Length = 291
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|473949|dbj|BAA06226.1| KIAA0116 [Homo sapiens]
Length = 290
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 55 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 115 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 173
>gi|395733899|ref|XP_002813914.2| PREDICTED: exosome complex component RRP42 [Pongo abelii]
gi|395733901|ref|XP_003776313.1| PREDICTED: exosome complex component RRP42 [Pongo abelii]
Length = 291
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|345321857|ref|XP_003430500.1| PREDICTED: exosome complex component RRP42-like [Ornithorhynchus
anatinus]
Length = 276
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +P EG L + S A+P+FE + I L + F
Sbjct: 41 TDILVGVKAEMGTPKLEKPKEGFLEFFVDCSANAAPEFEGRGGDELGTEIANTLYRIFNN 100
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
IDLESLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 101 KSSIDLESLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVQVLEDE 159
>gi|196004466|ref|XP_002112100.1| hypothetical protein TRIADDRAFT_55798 [Trichoplax adhaerens]
gi|190585999|gb|EDV26067.1| hypothetical protein TRIADDRAFT_55798 [Trichoplax adhaerens]
Length = 288
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 7/181 (3%)
Query: 420 RAQDWTDVDFMSSENWTSI-SAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLF 478
RA +DF + T I S NG A + ++VL + + PK R N G L
Sbjct: 23 RADGRRCIDFRRFQIETGIVSNTNGSARLRQY--GTDVLVGIKAEIGQPKQERSNTGHLE 80
Query: 479 INAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLN 538
+ S + + + G D + + + LE+ + +DL+SL ++A E+VW + +D
Sbjct: 81 FYVDCSSYNTTEID-GHIGDFTTQLTKSLERIYDSENVLDLKSLTIIAGEQVWVLYIDAV 139
Query: 539 VLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDP---IPMTILHYPVTI 595
VL GNLL C SIA AAL + R P V+ ++ ++ DP ++I PV +
Sbjct: 140 VLECCGNLLDCISIAVKAALYNTRIPGVSVNDEEGVLELEISDDPNDEKKLSIDKVPVIV 199
Query: 596 S 596
S
Sbjct: 200 S 200
>gi|83283957|gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum
tuberosum]
Length = 314
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 387 AGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAV 446
+ D+ E++ A+ L+ +R H K + ++ ++++ +G A+
Sbjct: 7 SSDLSSEMEVDAFRRLFPLR--YHEHHLLKSVRPDARKLGSARDTTLALGAVASADGSAL 64
Query: 447 WCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRF 506
+ + +LA + ++ P P+EG + I + P+ SP GR + + +I++
Sbjct: 65 A--KIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVISKQ 122
Query: 507 LEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
L S IDL+ LC+V + W +D+ L+ DG L ++A+AA +H P V
Sbjct: 123 LSDTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLNIPVV 182
Query: 567 TSTGDQIII 575
+ D I+
Sbjct: 183 SLNDDGRIV 191
>gi|124487127|ref|NP_001074657.1| exosome complex exonuclease RRP42 [Mus musculus]
gi|408360083|sp|Q9D0M0.2|EXOS7_MOUSE RecName: Full=Exosome complex exonuclease RRP42; AltName:
Full=Exosome component 7; AltName: Full=Ribosomal
RNA-processing protein 42
gi|66267444|gb|AAH94932.1| Exosome component 7 [Mus musculus]
gi|124376042|gb|AAI32364.1| Exosome component 7 [Mus musculus]
gi|148677125|gb|EDL09072.1| mCG23310, isoform CRA_b [Mus musculus]
gi|148877509|gb|AAI45676.1| Exosome component 7 [Mus musculus]
Length = 291
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|168041870|ref|XP_001773413.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675289|gb|EDQ61786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 287
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
V ++V+ V + P RP+ G + I E SP A+P+FE + S+ + R LE+
Sbjct: 51 VGGTDVMVSVKAELGNPPKGRPSHGGMQIKVECSPTANPEFEGRGGEELSLELTRGLERS 110
Query: 511 F-----KESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD 565
F IDL +L +V + W + +D VL+ DGNLL SIA AAL + P
Sbjct: 111 FLGGPNGSGAAIDLSTLRIVDGKTCWVLCIDGLVLSSDGNLLDALSIAVKAALRNTGLPK 170
Query: 566 VTSTGDQIIIHSAAEKDP 583
V +++ A ++DP
Sbjct: 171 V-----EVVAGGAEDEDP 183
>gi|426340209|ref|XP_004034025.1| PREDICTED: exosome complex component RRP42 [Gorilla gorilla
gorilla]
gi|426340211|ref|XP_004034026.1| PREDICTED: exosome complex component RRP42 [Gorilla gorilla
gorilla]
Length = 291
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|410947312|ref|XP_003980394.1| PREDICTED: exosome complex component RRP43 [Felis catus]
Length = 257
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 413 HFWKESKRAQDWTDVDFMSSE-NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
F KE+ R +F ++ N SIS +G A+ + + V+ + P
Sbjct: 16 RFLKENCRPDGRELGEFRTTTVNIGSISTADGSALV--KLGNTTVICGIKAEFAAPPTDA 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P++G + N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W
Sbjct: 74 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLSW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAAL 558
+ D+ L+YDGN+L C+ A LAAL
Sbjct: 134 VLYCDIICLDYDGNILDACTFALLAAL 160
>gi|326508906|dbj|BAJ86846.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
++S+ +G A+ + + +LA + ++ P A P++G + + + P+ SP GR
Sbjct: 58 AVSSAHGSALV--RLGDTAMLASIKLEVMSPPAETPDQGSVAVEFHMPPICSPLVRPGRP 115
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ + +I++ LE S ++L+ LC+++ + W +D+ LN DG+L I+ +A
Sbjct: 116 AEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYLDVYCLNADGSLFDAALISVVA 175
Query: 557 ALAHFRHPDVTSTGD 571
A H P + S GD
Sbjct: 176 AFTHLEIP-LVSVGD 189
>gi|390601634|gb|EIN11028.1| hypothetical protein PUNSTDRAFT_142893 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 284
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SIS +G A+ + + ++ V + P P+ G L N +L + SP+F+
Sbjct: 56 NVGSISTADGSALV--RLGDTTIVCGVKAEIAEPDLNSPSAGFLVPNIDLPAICSPKFKP 113
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G ++ + +++ S + LESLC+ + W + VD +NYDGN IA
Sbjct: 114 GPPSEEAQVLSEKFNDILTLSGLLPLESLCIHPGKSCWVLYVDATCINYDGNAFDAALIA 173
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
++AL P + D + + + +P+ + PV +S+ +FN
Sbjct: 174 MVSALKDTSLPKASYDEDSGRT-TCSRSEAMPLPLRQPPVPVSFGLFN 220
>gi|387915924|gb|AFK11571.1| exosome complex component RRP42-like protein [Callorhinchus milii]
Length = 291
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 52/111 (46%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL V M PK RP EG L + S A+P+FE D I L + F
Sbjct: 58 VLVGVKAEMGAPKLERPKEGFLEFFVDCSANATPEFEGRGGEDLGTEIANTLYRVFDNGS 117
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+DL +LC+ E W + VD+ +L GNL SIA AAL + R P V
Sbjct: 118 SLDLTALCITPREHCWILFVDVLLLECGGNLFDAISIAVKAALHNTRIPKV 168
>gi|345091073|ref|NP_001230753.1| exosome component 7 [Sus scrofa]
Length = 291
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE + I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDELGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
IDL+SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KGSIDLKSLCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|213688370|ref|NP_001094195.1| exosome component 7 [Rattus norvegicus]
gi|149018124|gb|EDL76765.1| exosome component 7 [Rattus norvegicus]
Length = 291
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK RP+EG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLERPSEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 KSSVDLRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 174
>gi|73985825|ref|XP_533858.2| PREDICTED: exosome complex component RRP42 isoform 1 [Canis lupus
familiaris]
Length = 291
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
IDL+SLC+ E W + VD+ +L GNL IA AAL + R P V D+
Sbjct: 116 KSSIDLKSLCISPREHCWILYVDVLLLECGGNLFDTICIAVKAALFNTRIPRVRVLEDE 174
>gi|348529951|ref|XP_003452475.1| PREDICTED: exosome complex component RRP42-like [Oreochromis
niloticus]
Length = 291
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL V + P+ T P EG L + S A+P+FE + ++ L K F
Sbjct: 56 TAVLVGVKAEIGKPRPTVPTEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
+ IDL+SLC+ A E W + VD+ +L DGNL S+A AAL + + P V + D
Sbjct: 116 KRSIDLKSLCICAGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPKVHISSD 173
>gi|355686807|gb|AER98193.1| exosome component 7 [Mustela putorius furo]
Length = 291
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +P+EG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPDEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ E W + VD+ +L DGNL IA AAL + R P V D+
Sbjct: 116 KSSVDLKSLCISPREHCWILYVDVLLLECDGNLFDTICIAVKAALFNTRIPRVRVLEDE 174
>gi|444512849|gb|ELV10190.1| Exosome complex component RRP42 [Tupaia chinensis]
Length = 308
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +P+EG L + S A+P+FE D I L + F
Sbjct: 73 TDILVGVKAEMSTPKLEKPSEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 132
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+DL SLC+ E W + VD+ +L GNL SIA AAL + R P V
Sbjct: 133 KSSVDLRSLCISPREHCWALYVDVLLLECGGNLFDAISIAVKAALFNTRIPRV 185
>gi|432100894|gb|ELK29247.1| Exosome complex component RRP42 [Myotis davidii]
Length = 298
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE + I L + F
Sbjct: 63 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDELGTEIANTLYRIFSN 122
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 123 KSSVDLKSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 181
>gi|59809424|gb|AAH89995.1| Exosc7 protein, partial [Rattus norvegicus]
Length = 257
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK RP+EG L + S A+P+FE D I L + F
Sbjct: 22 TDILVGVKAEMGTPKLERPSEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 81
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 82 KSSVDLRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 140
>gi|325187967|emb|CCA22510.1| exosome complex exonuclease RRP42like protein putati [Albugo
laibachii Nc14]
Length = 298
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTD-TSVMINRFLEKCFK 512
++VLA V ++ P PN G+L +N P S + GR D ++ +++ +++ F
Sbjct: 55 TDVLASVKLEVLSPSLEAPNSGVLNVNVTCFPSISSKITNGRALDEINIELSQLMQRIFT 114
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST--- 569
K IDL C+V + VW + VD+ V G+L SIA AAL P V
Sbjct: 115 SHKSIDLNKFCIVPSQFVWGIFVDVVVYESTGSLPDLISIAMYAALKKTLFPCVRMLGVE 174
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVT--ISYAVFNGGSEGSTVPGFTE--CIQLDTALALS 625
GD+ I+ E+DP L V + + G+ P E C+ +AL+
Sbjct: 175 GDEKILQ--VERDPAAGEYLAATVCFPLCTTICKIGNYSVMDPTLEEELCVSTQNVVALN 232
Query: 626 QDRQKLGVDSAYAN 639
++ G+ Y +
Sbjct: 233 REGSICGIQKRYGD 246
>gi|348667912|gb|EGZ07737.1| hypothetical protein PHYSODRAFT_529521 [Phytophthora sojae]
Length = 283
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL + + P P++G + + LSP+ S +F GR ++ S I+ L +
Sbjct: 69 TSVLTAIKLAVGTPAVATPDQGEIAVQVHLSPLCSNRFSVGRPSEESQSISSQLTRIIVG 128
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S+ +++ESL +V + W + VD+ +++DGN+L + +AAL + P +
Sbjct: 129 SRVVEMESLSIVKGQSAWKLMVDVYCVDHDGNVLDAALTSIMAALKTLKLPATSVNEADN 188
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVF 600
++ ++D P+ + H S+AV
Sbjct: 189 VVSIVPDEDATPLRVEHCAYATSFAVV 215
>gi|30962875|gb|AAH52656.1| Exosome component 7 [Mus musculus]
Length = 291
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L GNL SIA AAL R P V D+
Sbjct: 116 KSSVDLRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFDTRIPRVRVLEDE 174
>gi|386876626|ref|ZP_10118725.1| 3' exoribonuclease family, domain 1 [Candidatus Nitrosopumilus
salaria BD31]
gi|386805588|gb|EIJ65108.1| 3' exoribonuclease family, domain 1 [Candidatus Nitrosopumilus
salaria BD31]
Length = 272
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EV+ V P ++G+ AEL P++ P ETG + + R +++ +E
Sbjct: 57 TEVICGVKIQPDRPFPDMGDKGIFICTAELLPLSHPTVETGPPGPDVIELARVVDRGIRE 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S ID+ L + + V V D V++YDGNL CS AA AAL + P D
Sbjct: 117 SHMIDVSQLVIEPNKSVVGVFADNVVVDYDGNLFDACSYAATAALLSSKSPKWNWVDDA- 175
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTECIQLDTALALSQDR----- 628
+ E + +P+ I PV+++ GS P E +D + ++ D
Sbjct: 176 --PTLVEGEDMPVPIATIPVSVTMGKI--GSHIIVDPNGDEWASMDARITITSDSNGNIC 231
Query: 629 --QKLGVDSAYANLVNKTDRILLDEG 652
QK G D +N+ I + G
Sbjct: 232 ALQKGGSDGFTLEEINRCGDISVKVG 257
>gi|161527941|ref|YP_001581767.1| exosome complex RNA-binding protein Rrp42 [Nitrosopumilus maritimus
SCM1]
gi|160339242|gb|ABX12329.1| 3' exoribonuclease [Nitrosopumilus maritimus SCM1]
Length = 272
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 459 QVSCNMVIPKATRP-----NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+V C + I + RP ++GL AEL P++ P ETG + + R +++ +E
Sbjct: 58 EVVCGVKI-QPDRPFPDTGDKGLFICTAELLPLSHPTVETGPPGPEVIELARVVDRGIRE 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S ID+ L + ++ V V D V++YDGNL CS AA AAL + P D
Sbjct: 117 SHMIDVSQLVIEKDKSVIGVFADNVVVDYDGNLFDACSYAATAALLSSKSPKWNWVDDAP 176
Query: 574 IIHSAAEKDPIPMTILHYPVTIS 596
+ E D +P+T + VT+
Sbjct: 177 ALVEGEEVD-VPITTIPVSVTMG 198
>gi|213983243|ref|NP_001135527.1| uncharacterized protein LOC100216070 [Xenopus (Silurana)
tropicalis]
gi|156229972|gb|AAI52124.1| Zgc:110717 protein [Danio rerio]
gi|195539973|gb|AAI67984.1| Unknown (protein for MGC:180975) [Xenopus (Silurana) tropicalis]
Length = 291
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL + + P+ PNEG L + S A+P+FE + V ++ L K F
Sbjct: 56 TDVLVGIKAEIGKPRPMVPNEGYLEFFVDCSANATPEFEGRGGEELGVELSNTLYKVFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L DGNL SIA AAL + R P V + D+
Sbjct: 116 RHSLDLRSLCICPGENCWVLYVDVLLLQCDGNLFDAISIAIKAALFNTRIPKVHISEDE 174
>gi|393216212|gb|EJD01703.1| hypothetical protein FOMMEDRAFT_88508 [Fomitiporia mediterranea
MF3/22]
Length = 294
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 414 FWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPN 473
F + + D+ DV S N SIS +G ++ + + ++ V + P+ P
Sbjct: 46 FRPDGREVADFRDV----SVNVGSISTADGSSLV--RLGDTTIVCGVKAEIAEPELDSPE 99
Query: 474 EGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNV 533
G + N +L + SP+F+ G D + +++ L S+ + L SLC+ + VW +
Sbjct: 100 LGFIVPNLDLPAICSPKFKPGPPADEAQVLSERLYDALISSETVSLPSLCIHPRKAVWVL 159
Query: 534 RVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILH 590
VD +N+DGN+ +A +AAL + R P T TG + + K+ + IL
Sbjct: 160 YVDATCINFDGNVFDAALLAMIAALKNTRLPKATFDEETGRT----TCSRKEKTALQILR 215
Query: 591 YPVTISYAVFN 601
P+ IS+ +F+
Sbjct: 216 TPLAISFGIFD 226
>gi|383861879|ref|XP_003706412.1| PREDICTED: exosome complex component RRP42-like [Megachile
rotundata]
Length = 291
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL + + P A +PNEG L + S A+P FE D + I+ L ++
Sbjct: 56 TDVLVGIKVELDSPHADKPNEGKLEFFVDCSATATPAFEGKGGDDLATEISNILTIAYQT 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---- 569
DL +LC++ +K W + VD+ +L GNL A AAL P +T+
Sbjct: 116 RNAFDLRTLCILPSKKCWKIFVDVLILQCGGNLFDTVGAAVKAALYSTEIPKITAATLDG 175
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTIS 596
G+ I S D I + +YPV ++
Sbjct: 176 GEPDIQLSDDLYDCIQLDTSNYPVIVT 202
>gi|37359778|dbj|BAC97867.1| mKIAA0116 protein [Mus musculus]
Length = 286
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++ L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 51 TDFLVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 110
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 111 KSSVDLRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 169
>gi|392590636|gb|EIW79965.1| hypothetical protein CONPUDRAFT_166613 [Coniophora puteana
RWD-64-598 SS2]
Length = 289
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 422 QDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINA 481
+DW +V S N SIS +G A+ + + ++ V + P+ +P+EG L N
Sbjct: 49 EDWREV----SVNVGSISTAHGSALV--RMGDTRIVCGVKAEIAEPELDKPHEGFLVPNL 102
Query: 482 ELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLN 541
+L + SP+F+ G + + +++ L + S + LESL + + VW + +D LN
Sbjct: 103 DLPALCSPKFKPGPPAEEAQILSERLNEALVASGILPLESLAIHPGKAVWTIYIDAICLN 162
Query: 542 YDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAA-EKDPIPMTILHYPVTISYAVF 600
+DGN +A +AAL + R P +T D+ H+ K+ +P+ + P++ S+ +
Sbjct: 163 FDGNAFDAALLAMVAALYNTRLP--VATFDEDTGHTTCLRKETVPLELTCKPISTSFGML 220
Query: 601 N 601
+
Sbjct: 221 D 221
>gi|395540147|ref|XP_003772020.1| PREDICTED: exosome complex component RRP42 [Sarcophilus harrisii]
Length = 281
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 416 KESKRAQDWTDVDFMSSENWTSISAE-----NGEAVWCPWVKPSEVLAQVSCNMVIPKAT 470
K SK Q+ VD E++ E N + +++L V M PK
Sbjct: 3 KSSKLYQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLE 62
Query: 471 RPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKV 530
RP+EG L + S A+P+FE D I L + F IDL SLC+ E
Sbjct: 63 RPDEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKGSIDLTSLCISPREHC 122
Query: 531 WNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
W + VD+ +L GNL SIA AAL + P V D+
Sbjct: 123 WILYVDVLLLECGGNLFDAISIAVKAALFNTSIPKVRVLEDE 164
>gi|56970613|gb|AAH88546.1| LOC496941 protein, partial [Xenopus (Silurana) tropicalis]
Length = 289
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 55/116 (47%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ ++VL V M PK R EG L + S A+P+FE + I L K
Sbjct: 51 IGHTDVLVGVKAEMGTPKLERAGEGYLEFFVDCSANATPEFEGRGGEELGAEIAFMLYKI 110
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
F IDLESLC+ E W + VD+ +L GNL S+A AAL + R P V
Sbjct: 111 FDNRSSIDLESLCIQEREHCWVLYVDVLLLECGGNLFDTISVAVKAALFNARIPKV 166
>gi|332020945|gb|EGI61339.1| Exosome complex exonuclease RRP42 [Acromyrmex echinatior]
Length = 292
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V + P A RP EG L + S A+P FE D + I+ L ++
Sbjct: 57 TDVLVGVKLEIDTPYAERPEEGKLEFFVDCSANATPAFEGKGGDDLATEISNVLSMAYQT 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---- 569
DL+ LC++ +K W + VD+ +L GNL A AAL + P V
Sbjct: 117 PDAFDLKQLCIIPHQKCWKIYVDILILQCGGNLFDAVGAAVKAALYNTEIPRVIIAILDG 176
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTIS 596
G+ I S D I + + +YPV ++
Sbjct: 177 GEPDIQISDDPYDCIKLDVTNYPVVLT 203
>gi|334348902|ref|XP_003342119.1| PREDICTED: exosome complex component RRP42-like [Monodelphis
domestica]
Length = 332
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M P+ RPNEG L + S A+P+FE D I L + F
Sbjct: 97 TDILVGVKAEMGTPRLERPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 156
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
IDL +LC+ E W + VD+ +L GNL SIA AAL + P V
Sbjct: 157 KGSIDLTALCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTSIPKV 209
>gi|82524833|ref|NP_001032342.1| exosome component 7 [Xenopus (Silurana) tropicalis]
gi|89267936|emb|CAJ82816.1| exosome component 7 [Xenopus (Silurana) tropicalis]
Length = 291
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 55/116 (47%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ ++VL V M PK R EG L + S A+P+FE + I L K
Sbjct: 53 IGHTDVLVGVKAEMGTPKLERAGEGYLEFFVDCSANATPEFEGRGGEELGAEIAFMLYKI 112
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
F IDLESLC+ E W + VD+ +L GNL S+A AAL + R P V
Sbjct: 113 FDNRSSIDLESLCIQEREHCWVLYVDVLLLECGGNLFDTISVAVKAALFNARIPKV 168
>gi|297285946|ref|XP_002802903.1| PREDICTED: exosome complex exonuclease RRP42-like [Macaca mulatta]
Length = 556
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+DL++LC+ E W + VD+ +L GNL SIA AAL + P V
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTSIPRV 168
>gi|449270963|gb|EMC81600.1| Exosome complex exonuclease RRP42, partial [Columba livia]
Length = 257
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +P+EG L + S A+P+FE + I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPDEGYLEFFVDCSANATPEFEGRGGEELGTEIANTLYRVFSS 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+DL+SLC+ E W + VD+ +L GNL SIA AAL + R P V
Sbjct: 116 ESSVDLKSLCINPREHCWVIYVDVLLLECGGNLFDAISIAVKAALFNTRIPKV 168
>gi|281348318|gb|EFB23902.1| hypothetical protein PANDA_021543 [Ailuropoda melanoleuca]
Length = 196
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 480 NAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNV 539
N +L P+ S +F +G + + + ++F+ + S+ I E LC+ + W + D+
Sbjct: 3 NVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLSWVLYCDIIC 62
Query: 540 LNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAV 599
L+YDGN+L C+ A LAAL + + P+VT + + +K + I +PV S+AV
Sbjct: 63 LDYDGNILDACTFALLAALKNVQLPEVTINEETGLAEVHLKKKSY-LNIRTHPVATSFAV 121
Query: 600 FN 601
F+
Sbjct: 122 FD 123
>gi|194381296|dbj|BAG58602.1| unnamed protein product [Homo sapiens]
Length = 164
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFR 562
+DL++LC+ E W + VD+ +L GNL SIA AAL + R
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTR 164
>gi|397475927|ref|XP_003809367.1| PREDICTED: exosome complex component RRP42-like [Pan paniscus]
Length = 164
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFR 562
+DL++LC+ E W + VD+ +L GNL SIA AAL + R
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTR 164
>gi|301754007|ref|XP_002912799.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex exonuclease
RRP42-like [Ailuropoda melanoleuca]
Length = 459
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F +
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNK 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +DL+SLC+ E W + VD+ +L GNL IA AAL + R P V D+
Sbjct: 116 SS-VDLKSLCISPREHCWILYVDVLLLECGGNLFDTICIAVKAALFNTRIPRVRVLEDE 173
>gi|281343574|gb|EFB19158.1| hypothetical protein PANDA_000598 [Ailuropoda melanoleuca]
Length = 271
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F +
Sbjct: 37 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNK 96
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
S +DL+SLC+ E W + VD+ +L GNL IA AAL + R P V D+
Sbjct: 97 SS-VDLKSLCISPREHCWILYVDVLLLECGGNLFDTICIAVKAALFNTRIPRVRVLEDE 154
>gi|326922105|ref|XP_003207292.1| PREDICTED: exosome complex exonuclease RRP42-like [Meleagris
gallopavo]
Length = 291
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +P+EG L + S A+P+FE + I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPDEGYLEFFVDCSANATPEFEGRGGEELGTEIASTLYRIFSS 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
IDL+SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 EGSIDLKSLCINPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPKVRVLEDE 174
>gi|328767845|gb|EGF77893.1| hypothetical protein BATDEDRAFT_27226 [Batrachochytrium
dendrobatidis JAM81]
Length = 482
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 48/193 (24%)
Query: 161 TRTSPKHLQVLKRH-SQKVYASPSRRRMDTKGEV-EEMTYPCVCFTVDNFNEVFHDILVR 218
TRT K V +R ++KV+ASP + RMD K V E ++P V +TV++F + +
Sbjct: 202 TRTGNKSRMVAQRRITKKVFASPYKSRMDVKDAVMNECSFPLVYYTVNDFESHALHLPIS 261
Query: 219 DGEMVCVEL--------------VASDRAGSV----------------KSVIFLGSIRYD 248
+ E +CVEL A+D+ S+ K ++F G++ Y
Sbjct: 262 EREYLCVELSFTIPDNQSSSAYAAATDKVASISLEEDSTPFPVPPNHTKVILFQGAVPYS 321
Query: 249 ALKRVYDAR-TSVSNKFTQ------RMSFGIFSN---------NSNSRIEFVKMKGPQGK 292
+L Y + +V ++F Q R S +N S R E++ M+GP GK
Sbjct: 322 SLLDNYQQKGLAVQSQFRQAWTNMNRHSSAASTNPNTGEVDLNRSAGRTEYIMMRGPNGK 381
Query: 293 GFAEMAVTKPKGY 305
G ++A+T Y
Sbjct: 382 GQCQVAITDNDSY 394
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 77 DLFVRYFLFQTDSNIDCDDLLFFVRKKYIKTSSRNLPKF---ETEVEVFRKDSRKLPIGD 133
D F++ F+ DDLLFFVR+ + ++S+N P V V R+ + +P D
Sbjct: 2 DFFIKTTGFEVH-----DDLLFFVRQ--LPSNSKNSPTALPDSDAVLVKRRTAGVIPALD 54
Query: 134 PDVDWEETVYLNMIIHQFDYTLTLAICTRTS 164
VDW+++ +LN+ I Q TLT+A+CTR S
Sbjct: 55 DVVDWKQSFFLNL-ISQLPCTLTVAVCTRGS 84
>gi|393245799|gb|EJD53309.1| hypothetical protein AURDEDRAFT_110988 [Auricularia delicata
TFB-10046 SS5]
Length = 287
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 414 FWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPN 473
F + ++ DW ++ S N SI+ G A+ + + V+ V + P+ +P+
Sbjct: 35 FRPDGRKTSDWREI----SVNVGSITTAEGSALV--RLGDTTVVCGVKAEIAEPELDKPD 88
Query: 474 EGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNV 533
EG L N +L ++SP+F+ G ++ + +++ L + L SLC+ + VW +
Sbjct: 89 EGFLVPNLDLPAISSPKFKPGAPSEEAQVLSNRLYDLLTSCDVLPLSSLCIEPGKAVWTI 148
Query: 534 RVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPV 593
+D+ +NYDGN AA+AAL + R P T ++ + + + +T+ P+
Sbjct: 149 FLDIICINYDGNAFDATVAAAVAALKNARLPKAT-FNEETRKTTCSRTEKQALTLNRIPL 207
Query: 594 TISYAVFN 601
+S+ VF+
Sbjct: 208 AMSFGVFD 215
>gi|322788559|gb|EFZ14187.1| hypothetical protein SINV_07329 [Solenopsis invicta]
Length = 292
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V + P A RP+EG L + S A+P FE D + I+ L ++
Sbjct: 57 TDVLVGVKVEIDTPYAERPHEGKLDFFVDCSANATPAFEGKGGDDLATEISNVLSIAYQT 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---- 569
DL+ LC++ +K W + VD+ +L GNL A AAL + P V +
Sbjct: 117 PNAFDLKQLCIIPYKKCWKMYVDILILQCGGNLFDAVGAAVKAALYNTEIPRVITATLDG 176
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTIS 596
G+ I S D I + + +YP+ ++
Sbjct: 177 GEPDIQVSDDPYDCIKLDVTNYPLVVT 203
>gi|348582602|ref|XP_003477065.1| PREDICTED: exosome complex component RRP42-like [Cavia porcellus]
Length = 291
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 421 AQDWTDVDFMSSENWTSISAE-----NGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEG 475
Q+ VD S E++ S+ E N + +++L V M PK +P EG
Sbjct: 18 VQEDLRVDGRSCEDYRSVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKPEEG 77
Query: 476 LLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRV 535
L + S A+P+FE D I L + F +DL+SLC+ E W + V
Sbjct: 78 YLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNRSSVDLKSLCISPREHCWVLYV 137
Query: 536 DLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
D+ +L GNL S+ AAL + R P V D+
Sbjct: 138 DVLLLECGGNLFDAISVTVKAALFNTRIPKVRVLEDE 174
>gi|302410689|ref|XP_003003178.1| exosome complex exonuclease RRP45 [Verticillium albo-atrum
VaMs.102]
gi|261358202|gb|EEY20630.1| exosome complex exonuclease RRP45 [Verticillium albo-atrum
VaMs.102]
Length = 271
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 51/72 (70%)
Query: 529 KVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTI 588
KVW+VR D++V+++DGN++ +AA+AAL HFR PD G+ + + + AE++P+P+
Sbjct: 106 KVWSVRADVHVVSHDGNIVDAACLAAVAALRHFRKPDAQVEGEDLTVFTPAEREPVPLGW 165
Query: 589 LHYPVTISYAVF 600
LH P +++A F
Sbjct: 166 LHSPFCVTFAHF 177
>gi|62955139|ref|NP_001017585.1| exosome complex exonuclease RRP42 [Danio rerio]
gi|62531183|gb|AAH92997.1| Zgc:110717 [Danio rerio]
Length = 291
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL + + P+ P+EG L + S A+P+FE + V ++ L K F
Sbjct: 56 TDVLVGIKAEIGKPRPMVPDEGYLEFFVDCSANATPEFEGRGGEELGVELSNTLYKVFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L DGNL SIA AAL + R P V + D+
Sbjct: 116 RHSLDLRSLCICPGENCWVLYVDVLLLQCDGNLFDAISIAIKAALFNTRIPKVHISEDE 174
>gi|58381777|ref|XP_311461.2| AGAP010483-PA [Anopheles gambiae str. PEST]
gi|55242661|gb|EAA07136.2| AGAP010483-PA [Anopheles gambiae str. PEST]
Length = 303
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPK 468
T H +++ R T+ D+ E + I + +++L V + P
Sbjct: 12 TYILHGIQKNMRNDGRTNRDYRPMEFESEIVVHAAGSARLRLAN-TDILVGVKAEIDTPN 70
Query: 469 ATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEE 528
RPNEG + + S A+P+FE + I+ L K ++ K DL LC++A
Sbjct: 71 PDRPNEGKVDFFIDCSANATPEFEGRGGEQLATEISNTLSKAYESQKGFDLAGLCIMAGH 130
Query: 529 KVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPI 584
+ W + VD+ +L GNL S+A AL + R P V++ +H D I
Sbjct: 131 QCWKLYVDVLILECGGNLFDAVSLAVKGALFNTRIPRVSTA-----MHDGGSMDLI 181
>gi|402860382|ref|XP_003894609.1| PREDICTED: exosome complex component RRP42 [Papio anubis]
gi|402860384|ref|XP_003894610.1| PREDICTED: exosome complex component RRP42 [Papio anubis]
gi|355559716|gb|EHH16444.1| hypothetical protein EGK_11725 [Macaca mulatta]
gi|355746753|gb|EHH51367.1| hypothetical protein EGM_10727 [Macaca fascicularis]
gi|380786223|gb|AFE64987.1| exosome complex component RRP42 [Macaca mulatta]
gi|384943954|gb|AFI35582.1| exosome complex component RRP42 [Macaca mulatta]
Length = 291
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +PNEG L + S A+P+FE D I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL++LC+ E W + VD+ +L GNL SIA AAL + P V D+
Sbjct: 116 KSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTSIPRVRVLEDE 174
>gi|354486487|ref|XP_003505412.1| PREDICTED: exosome complex component RRP42-like [Cricetulus
griseus]
Length = 274
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 57/119 (47%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +P+EG L + S A+P+FE D I L + F
Sbjct: 39 TDILVGVKAEMGTPKLEKPSEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNN 98
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 99 KSSVDLSSLCISPREHCWVLCVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 157
>gi|312371957|gb|EFR20014.1| hypothetical protein AND_20780 [Anopheles darlingi]
Length = 407
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V + P RPNEG + + S A+P+FE + I+ L K ++
Sbjct: 164 TDILVGVKAEIDTPHPDRPNEGKIDFFIDCSANAAPEFEGRGGEQLAEEISNTLAKAYES 223
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
DL SLC++A + W + VD+ VL GNL S+A AL + R P V++
Sbjct: 224 QHGFDLSSLCILANHQCWKLYVDVLVLECGGNLFDAISLAVKGALYNTRVPRVST 278
>gi|356461011|ref|NP_001239083.1| exosome component 7 [Gallus gallus]
Length = 291
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +P+EG L + S A+P+FE + I L + F
Sbjct: 56 TDILVGVKAEMGTPKLEKPDEGYLEFFVDCSANATPEFEGRGGEELGTEIASTLYRIFSS 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 116 EGSVDLKSLCINPGEHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPKVRVLEDE 174
>gi|255578727|ref|XP_002530222.1| exosome complex exonuclease rrp42, putative [Ricinus communis]
gi|223530269|gb|EEF32169.1| exosome complex exonuclease rrp42, putative [Ricinus communis]
Length = 287
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ +EV+A V + P A +P++G + I + SP+A P FE + S ++ L+ C
Sbjct: 51 IGATEVIASVKAELGRPNAFQPDKGKVAIFVDCSPVAEPTFEARGGEELSAELSAALQHC 110
Query: 511 FKESKC-----IDLESLCVVAEEKV-WNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
K IDL SL VVAE K+ W++ +D V+++DGNLL A AAL++ P
Sbjct: 111 LLGGKSGAGAGIDLSSL-VVAEGKICWDLYIDGLVVSFDGNLLDALGAAIKAALSNTGIP 169
Query: 565 DV 566
V
Sbjct: 170 KV 171
>gi|317574781|ref|NP_001188120.1| exosome complex exonuclease rrp42 [Ictalurus punctatus]
gi|308322915|gb|ADO28595.1| exosome complex exonuclease rrp42 [Ictalurus punctatus]
Length = 291
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + + P+ P+EG L + S A+P+FE + V ++ L K F
Sbjct: 56 TDILVGIKAEIGRPRPMVPDEGYLEFFVDCSANATPEFEGRGGEELGVELSNNLYKVFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L DGNL SIA AAL + R P+V + D+
Sbjct: 116 RHSLDLRSLCIRPGENCWVLYVDVLLLQCDGNLFDAMSIAIKAALFNTRIPNVHISEDE 174
>gi|119872347|ref|YP_930354.1| exosome complex RNA-binding protein Rrp42 [Pyrobaculum islandicum
DSM 4184]
gi|119673755|gb|ABL88011.1| ribosomal RNA-processing protein RRP42 [Pyrobaculum islandicum DSM
4184]
Length = 274
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V ++ P P+EG+L +NAE+ P ASP E G + ++ + R +++ +
Sbjct: 62 THVVAGVKVSLGQPFPDAPDEGVLVVNAEVLPHASPYTEVGPPDEFAIELARVIDRGIRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D + L VV K + + VDL V+N DGNL+ ++AA+AAL + P V +Q
Sbjct: 122 CGYVDFKKL-VVEGGKAYVLWVDLYVINDDGNLIDAANLAAVAALKDTQLP-VVVKDEQG 179
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV---PGFTECIQLD--TALALSQDR 628
+ K P+P+ + P+ +S G G + P F E + LD +S+DR
Sbjct: 180 VKLDRNNKTPLPIEVSKAPIAVSV-----GKIGGVLFLDPTFEEELSLDGRITFTISEDR 234
>gi|221219924|gb|ACM08623.1| Exosome complex exonuclease RRP45 [Salmo salar]
Length = 114
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 419 KRAQDWTDVDFMSSENWTSISAENGEAVWCPWV--KPSEVLAQVSCNMVIPKATRPNEGL 476
K ++ +D + ++ SI G C +V + ++AQVSC ++ PK RPNEG+
Sbjct: 16 KAIEEKKRLDGRQTYDYRSIKISFGTDYGCCFVDLGKTRIMAQVSCELITPKENRPNEGI 75
Query: 477 LFINAELSPMASPQFE 492
+F N ELSPMASP FE
Sbjct: 76 MFFNIELSPMASPAFE 91
>gi|167045226|gb|ABZ09886.1| putative 3' exoribonuclease family, domain 1 [uncultured marine
crenarchaeote HF4000_APKG8O8]
Length = 273
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EV+A V P +G+ AE+ P+A P ETG + I R +++ +E
Sbjct: 57 TEVVAGVKIQPDRPFPDMGEKGIFICTAEILPLAHPSVETGPPQPYVIEIARVVDRGIRE 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S IDL + +V ++ V + D V ++DGNL CS A+ AA+ + P D+
Sbjct: 117 SGMIDLSQMVLVKDKSVIGLFADNVVTDHDGNLFDACSYASTAAVLTSKMPKWEMKDDKP 176
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
++ E D P+T + PV+++ +
Sbjct: 177 VLVDGEESD-TPITTI--PVSVTMGLIG 201
>gi|157169424|ref|XP_001651510.1| exosome complex exonuclease rrp42 (ribosomal RNA processing protein
42 [Aedes aegypti]
gi|108878402|gb|EAT42627.1| AAEL005851-PA [Aedes aegypti]
Length = 299
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 400 NPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAEN-GEAVWCPWVKPSEVLA 458
N L + T H ++ R T+ D+ E T I G A + +++L
Sbjct: 3 NVLLSEAEKTYILHGIQKDYRNDGRTNRDYRPMELETDIVVHAMGSARL--RLANTDILV 60
Query: 459 QVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCID 518
V ++ P RP EG + + S A+P FE + + I+ L K + + D
Sbjct: 61 AVKADIDAPSPDRPKEGKIEFFVDCSANATPDFEGRGGEELATEISNTLSKAYLSQQAFD 120
Query: 519 LESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
L LC++A+ + W + VD+ +L GNL S+A AAL + P V+S
Sbjct: 121 LSPLCILAKHQCWKLYVDILILECGGNLFDAVSLAVKAALYSTKLPRVSSA 171
>gi|327310388|ref|YP_004337285.1| exosome complex RNA-binding protein Rrp42 [Thermoproteus uzoniensis
768-20]
gi|326946867|gb|AEA11973.1| exosome complex RNA-binding protein Rrp42 [Thermoproteus uzoniensis
768-20]
Length = 273
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V + P P+EG+L +NAE+ P ASP E G +T++ + R +++ +
Sbjct: 62 TRVVAGVKVGLGQPFPDAPDEGVLIVNAEILPHASPYSEIGPPDETAIELARVVDRGIRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLL 547
S +D + L + + KV+ + VDL VLN DGNL+
Sbjct: 122 SGFVDFKKLA-IDQNKVYVLWVDLYVLNDDGNLV 154
>gi|119585138|gb|EAW64734.1| exosome component 7, isoform CRA_b [Homo sapiens]
Length = 226
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 53/109 (48%)
Query: 464 MVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLC 523
M PK +PNEG L + S A+P+FE D I L + F +DL++LC
Sbjct: 1 MGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLC 60
Query: 524 VVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 61 ISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 109
>gi|167044982|gb|ABZ09647.1| putative 3' exoribonuclease family, domain 1 [uncultured marine
crenarchaeote HF4000_APKG8G2]
Length = 272
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EV++ + P ++G+ AE+ P+A P ETG + I R +++ +E
Sbjct: 57 TEVVSGIKIQPDKPFPDMGDKGIFICTAEILPLAHPSAETGPPQPNVIEIARVVDRGIRE 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ- 572
S IDL L + ++ V V D V ++DGNL CS AA+AA+ + P D+
Sbjct: 117 SGMIDLSQLVLQKDKSVIGVFADNVVTDHDGNLFDACSYAAVAAIITSKIPKWEMKDDKP 176
Query: 573 IIIHSAAEKDPI---PMTI--------------------LHYPVTIS-------YAVFNG 602
++I A PI P+++ L +TI+ A+ G
Sbjct: 177 VLIEDQASDTPITTIPISVTMGLMGEFIIVDPNLDEWECLDARITITTNSDGNIVALQKG 236
Query: 603 GSEGSTVPGFTECIQLDTALA 623
GS+G ++ +C +L A+
Sbjct: 237 GSDGFSLEQLVKCSELSIAIG 257
>gi|225716114|gb|ACO13903.1| Exosome complex exonuclease RRP42 [Esox lucius]
Length = 291
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V + P+ P+EG L + S A+P+FE + V ++ L K F
Sbjct: 56 TDVLVGVKAEIGKPRPMVPHEGYLEFFVDCSANATPEFEGRGGDELGVELSNTLYKVFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
IDL+SLC+ E W + VD+ +L DGNL S+A AAL + + P V
Sbjct: 116 RSSIDLKSLCISPGEHCWVLYVDVLLLQCDGNLFDAISVAIKAALFNTKIPKV 168
>gi|213512498|ref|NP_001134892.1| Exosome complex exonuclease RRP42 [Salmo salar]
gi|209736940|gb|ACI69339.1| Exosome complex exonuclease RRP42 [Salmo salar]
Length = 291
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVM-INRFLEKCFK 512
++VL V M P+ P EG L + S A+P+FE GR D M ++ L K F
Sbjct: 56 TDVLVGVKAEMGKPRPMVPGEGYLEFFVDCSANATPEFE-GRGGDELGMELSNTLYKVFN 114
Query: 513 ESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ E W + VD+ +L DGNL S+A AAL + + P V + D+
Sbjct: 115 NRYSVDLKSLCISPGEHCWVLYVDVLLLQCDGNLFDAISVAIKAALFNTKIPKVHISEDE 174
>gi|384486761|gb|EIE78941.1| hypothetical protein RO3G_03646 [Rhizopus delemar RA 99-880]
Length = 303
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S+VL V + + ++PN+G L +N E SP AS QFE + + + +++ F
Sbjct: 56 SDVLVGVKVEIGEVERSQPNKGRLVLNVECSPSASQQFEGRGADEINNSLTMAIDRIFNG 115
Query: 514 SKC-IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
+ +DLE LC++ ++ W + +D V++ GNLL C + AAL + R P
Sbjct: 116 PQSGLDLEKLCIIPGQQCWVIYIDAMVMDAAGNLLDCIVMTTRAALYNARIP 167
>gi|308322117|gb|ADO28196.1| exosome complex exonuclease rrp42 [Ictalurus furcatus]
Length = 291
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + + P+ P+EG L + S A+P+FE + V ++ L K F
Sbjct: 56 TDILVGIKAEIGRPRPMVPDEGYLEFFVDCSANATPEFEGRGGEELGVELSNNLYKVFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL SLC+ E W + VD+ +L DGNL SIA AAL + R P V + D+
Sbjct: 116 RHSLDLRSLCISPGESCWVLYVDVLLLQCDGNLFDAMSIAIKAALFNTRIPKVHISEDE 174
>gi|167044511|gb|ABZ09186.1| putative 3' exoribonuclease family, domain 1 [uncultured marine
crenarchaeote HF4000_APKG6J21]
Length = 272
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EV++ + P ++G+ AE+ P+A P ETG + I R +++ +E
Sbjct: 57 TEVVSGIKVQPDKPFPDMGDKGIFICTAEILPLAHPSAETGPPQPNVIEIARVVDRGIRE 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ- 572
S IDL + + ++ V V D V ++DGNL CS AA+AA+ + P D+
Sbjct: 117 SGMIDLSQMVLQKDKSVIGVFADNVVTDHDGNLFDACSYAAVAAIITSKIPKWEMKDDKP 176
Query: 573 IIIHSAAEKDPI---PMTI--------------------LHYPVTIS-------YAVFNG 602
++I A PI P+++ L +TI+ A+ G
Sbjct: 177 VLIEDQASDTPITTIPISVTMGLIGEFIIVDPNLDEWECLDARITITTNSDGNIVALQKG 236
Query: 603 GSEGSTVPGFTECIQLDTALA 623
GS+G ++ +C +L A+
Sbjct: 237 GSDGFSLEQLVKCAELSIAIG 257
>gi|91079418|ref|XP_967497.1| PREDICTED: similar to exosome complex exonuclease rrp42 (ribosomal
RNA processing protein 42 [Tribolium castaneum]
gi|270003471|gb|EEZ99918.1| hypothetical protein TcasGA2_TC002710 [Tribolium castaneum]
Length = 285
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 8/207 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V + +P RP EG L + S A+P FE D ++ I+ L +K
Sbjct: 53 TDVLVAVKIEVDVPYPERPKEGKLEFFVDCSANATPDFEGRGGEDLAIEISNSLSAAYKS 112
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP---DVTSTG 570
+ DL LC++ K W + VD+ +L GNL SIA AAL R P VT G
Sbjct: 113 PEVFDLTKLCILKGHKCWKIFVDILLLECGGNLYDAVSIAVKAALWDTRIPLVKSVTVDG 172
Query: 571 DQIIIHSAAE-KDPIPMTILHYPVTISYAVFNGGSEGSTVPGFTE--CIQLDTALALSQD 627
+ + + + E D + + P+ ++ V G + P E C +A+S+D
Sbjct: 173 NNVDMEVSDELHDCQKLDVTAAPIMVT--VCKIGEQCIVDPNVAEELCSVGAVVIAVSKD 230
Query: 628 RQKLGVDSAYANLVNKTDRILLDEGEK 654
+ + +L +T L GEK
Sbjct: 231 KFSTVLQIGSGSLHPQTLLECLQMGEK 257
>gi|325180002|emb|CCA14404.1| exosome complex exonuclease RRP43 putative [Albugo laibachii Nc14]
Length = 293
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+K + V+ + + P + EG + I L+P+ S +F GR + + ++ + K
Sbjct: 67 LKNTSVITGIQLAVGTPAIDKQTEGDIVIQIHLTPLCSTRFNVGRACEEANAVSSHISKI 126
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPD--VTS 568
+ ++ IDL L + + WNV +D+ ++YDGN+ ++ + AL R P V+
Sbjct: 127 IRRARMIDLTQLSIEKGKSAWNVMIDVYCIDYDGNIFEVSLMSIMTALQKLRLPATRVSE 186
Query: 569 TGDQIIIHSAAEKDPIPM 586
++ I S E P+ M
Sbjct: 187 VDHKVEIDSDEESRPLIM 204
>gi|357631022|gb|EHJ78761.1| exosc7 protein [Danaus plexippus]
Length = 310
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 412 FHFWKESKRAQDWTDVDFMSSENWTSI-SAENGEAVWCPWVKPSEVLAQVSCNMVIPKAT 470
H ++ R+ +++D+ E T + S +G A + +++L V + +PK
Sbjct: 15 LHGIEDDFRSDGRSNIDYRPMELETDVVSHASGSARL--RLANTDILVGVKTEIDVPKPD 72
Query: 471 RPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKV 530
+PN+G + + S A+P+FE + I+ +++ + + DL+ LC++ ++
Sbjct: 73 KPNQGKIDFFVDCSANATPEFEGRGGEQLANNISNLMQRAYHSQQAFDLKQLCILEGKQC 132
Query: 531 WNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
W + VD+ +L GNL S+A AAL + R P V +
Sbjct: 133 WKLYVDILILECGGNLCDAVSLAVKAALFNTRIPFVKAA 171
>gi|307206575|gb|EFN84575.1| Exosome complex exonuclease RRP42 [Harpegnathos saltator]
Length = 296
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V + P A +P EG L + S A+P FE D + I+ L ++
Sbjct: 61 TDVLVGVKVEIDTPHANKPEEGKLDFFVDCSANATPAFEGKGGEDLATEISNLLSLAYRT 120
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---G 570
DL+ LC++ +K W + VD+ +L GNL A AAL + P V + G
Sbjct: 121 PYAFDLKELCILPHKKCWKMYVDILILQCGGNLFDAVGAAVKAALYNTEIPRVVTAMLDG 180
Query: 571 DQIIIHSAAE-KDPIPMTILHYPVTIS 596
++ + + + D I + + +YPV I+
Sbjct: 181 NEPDVKLSDDLYDCIKLNVTNYPVVIT 207
>gi|307176033|gb|EFN65792.1| Exosome complex exonuclease RRP42 [Camponotus floridanus]
Length = 426
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VL V + P A +P+EG L + S A+P FE D + I+ L ++
Sbjct: 191 TDVLVGVKLEIDTPYAEKPDEGKLDFFVDCSANATPAFEGKGGDDLATEISNVLSMAYQT 250
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---- 569
DL LC++ +K W + VD+ +L GNL A AAL + P V +
Sbjct: 251 PDVFDLRQLCIIPHKKCWKMYVDILILQCGGNLFDAVGAAVKAALYNTEIPKVIAATLDG 310
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTIS 596
G+ I S D I + I YP ++
Sbjct: 311 GEPDIQVSDDPYDCIKLDITTYPSIVT 337
>gi|224131852|ref|XP_002321194.1| predicted protein [Populus trichocarpa]
gi|222861967|gb|EEE99509.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
+ +EV+A V + P A +P++G + I + SP+A P FE + S ++ L++C
Sbjct: 51 IGATEVIASVKAELGRPNALQPDKGKVAIFVDCSPVAEPMFEGRGGEELSAELSVALQRC 110
Query: 511 FKESKC-----IDLESLCVVAEEKV-WNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
K IDL SL +VAE K+ W++ +D V++ DGNLL A AAL++ P
Sbjct: 111 LLGGKSGAGAGIDLSSL-IVAEGKICWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIP 169
Query: 565 DV 566
V
Sbjct: 170 RV 171
>gi|225711778|gb|ACO11735.1| Exosome complex exonuclease RRP43 [Caligus rogercresseyi]
Length = 279
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 472 PNEGLLFINAELSPMASPQF--ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEK 529
P +G + + +L M P+ G + ++++ +F+ S+ +D + LC+V E
Sbjct: 78 PTKGYIVPHVDLPSMCHPRIYKSKGPTAEEAMILTKFIMDVILNSEVVDPKDLCIVPGEI 137
Query: 530 VWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTG----DQIIIHSAAEKDPIP 585
VW +++DL LN DGNL A + AL R P V S D+ I+ EK+
Sbjct: 138 VWVLKIDLTCLNQDGNLRDALVTALILALKSLRFPKVVSYKAEDEDKTQIN-VFEKEHSS 196
Query: 586 MTILHYPVTISYAVFNG 602
+ + + PV++S AV G
Sbjct: 197 LRLKNIPVSVSIAVMEG 213
>gi|255582593|ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
gi|223528261|gb|EEF30313.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
Length = 303
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 387 AGDMRDELDDGAYNPLWTM----RGFTQTFHF-WKESKRAQDWTDVDFMSSENWTSISAE 441
+GD+ E++ A+ L+ + R ++ + RA+D T ++ +
Sbjct: 7 SGDLSTEMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTT-------LALGAVVSA 59
Query: 442 NGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSV 501
+G A+ + + ++A + ++ P + P+EG + I+ + P+ SP GR + +
Sbjct: 60 DGSAIA--KIGSTTMMAAIKMEVMTPSSESPDEGCIAIDFHMPPICSPLVRPGRPAEAAP 117
Query: 502 MINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHF 561
++++ L S IDL+ L +V+ + W +D+ L+ DG+L +A+AA +
Sbjct: 118 VVSKQLSDTIMSSAMIDLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALFSAVAAFTNL 177
Query: 562 RHPDVTSTGDQIII 575
+ P V+ D ++
Sbjct: 178 QIPIVSLNDDGKVV 191
>gi|424819697|ref|ZP_18244764.1| Putative exosome complex RNA-binding protein [Candidatus
Parvarchaeum acidophilus ARMAN-5_'5-way FS']
gi|326422493|gb|EGD71890.1| Putative exosome complex RNA-binding protein [Candidatus
Parvarchaeum acidophilus ARMAN-5_'5-way FS']
Length = 253
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V P RP +G L +N ELS + S G + ++S+ + R ++ +E
Sbjct: 51 TKVIAGVKVLNGTPFPDRPADGALIVNFELSELTSNY--PGDRINSSIEVGRVTDRGIRE 108
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
S IDL LCV + V V VD+ +N +GNL +IAAL A+ + R+
Sbjct: 109 SNLIDLSKLCVEEGKTVLFVYVDIVCINNEGNLFDAGNIAALRAILNTRY 158
>gi|328862357|gb|EGG11458.1| hypothetical protein MELLADRAFT_70820 [Melampsora larici-populina
98AG31]
Length = 292
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SIS NG ++ + + VL + + P PN+G + N E+ + S +F+
Sbjct: 64 NNNSISTSNGSSLVS--IGNTSVLCGIRFEVSEPNFMNPNQGYIIPNIEIGSLCSSKFKP 121
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
+ + S I L+ K S+ I+ SL + E+ VW + +D+ L+ DGN+L I+
Sbjct: 122 NQINEQSQTILTQLKMILKSSEIIEPSSLVIQPEKLVWVIYIDVICLSNDGNVLDASIIS 181
Query: 554 ALAALAHFRHPDVT--STGDQIIIHSAAEKDPIPMTILHYPVTISYAVF 600
AL + P V +++I+ +PIP+ + H ++++F
Sbjct: 182 ITQALQTAKRPQVEFDIETNEVILLDPNFFEPIPIPLNHTIHPFTFSIF 230
>gi|312372348|gb|EFR20329.1| hypothetical protein AND_20269 [Anopheles darlingi]
Length = 243
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
I + +G A+ + + V+ + + PKA PN+G L N E+SP++SP + G +
Sbjct: 75 IQSADGSAIA--KIGNTTVVCGIKAELAAPKAVEPNQGYLIPNVEISPVSSPSYRPGPPS 132
Query: 498 DTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDL 537
+ + + ++ L F +++CIDL LCV + VW + DL
Sbjct: 133 EEAQVYSQSLADVFSKARCIDLAQLCVEPGKLVWVLYCDL 172
>gi|407461958|ref|YP_006773275.1| exosome complex RNA-binding protein Rrp42 [Candidatus
Nitrosopumilus koreensis AR1]
gi|407045580|gb|AFS80333.1| exosome complex RNA-binding protein Rrp42 [Candidatus
Nitrosopumilus koreensis AR1]
Length = 272
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 459 QVSCNMVIPKATRP-----NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+V C + I + RP ++GL AEL P++ P ETG + + R +++ +E
Sbjct: 58 EVVCGVKI-QPDRPFPDTGDKGLFICTAELLPLSHPTVETGPPGPEVIELARVVDRGIRE 116
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S +D+ L + ++ V V D V++YDGNL CS A AAL + P D
Sbjct: 117 SHMVDVSQLVIEKDKSVIGVFADNVVVDYDGNLFDACSYATTAALLSSKSPKWNWVNDAP 176
Query: 574 IIHSAAEKDPIPMTILHYPVTISYA 598
+ E +P+T + PV+++ A
Sbjct: 177 AL-VEGEDTQVPITTI--PVSVTMA 198
>gi|384250624|gb|EIE24103.1| ribosomal protein S5 domain 2-like protein [Coccomyxa
subellipsoidea C-169]
Length = 293
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EVL V + +P P+ G L + E SP A P ++ D V + + LE+ K
Sbjct: 52 TEVLVGVKVEIGVPLEETPDCGGLQVTVECSPCAGPSYQGKSGEDLGVELTKSLERYLKP 111
Query: 514 SK-----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+ C+DL +L +V+ + W + +D +L DG++L S+AA AAL R P V
Sbjct: 112 GRSGKGGCVDLRALSIVSGRRCWILCIDALILAADGSVLDALSVAAKAALQDTRIPLV 169
>gi|346469645|gb|AEO34667.1| hypothetical protein [Amblyomma maculatum]
Length = 289
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + + P T P +G + + + A P+FE + + I L + F
Sbjct: 56 TDILVGIKAELDEPYPTAPGKGRIEFFVDCTANADPEFEGRGGEEVATKIKSALAQAFGS 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST---- 569
KC+DL+SL V+ ++VW + VD+ +L G+LL S+ AAL + P V+ T
Sbjct: 116 PKCLDLKSLAVIPGQQVWVLYVDVLILECGGSLLDAVSVGVKAALFDLKIPKVSVTVDEN 175
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTISYA 598
G+Q I S D M I P I+ +
Sbjct: 176 GEQEIEVSGDPYDVSKMDITDVPCFITLS 204
>gi|291393541|ref|XP_002713440.1| PREDICTED: exosome component 7 [Oryctolagus cuniculus]
Length = 290
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V M PK +P+EG + + S A+P+FE D I L + F +
Sbjct: 56 TDILVGVKAEMGTPKLEKPDEGYVEFFVDCSANATPEFEGRGGDDLGTEIANTLARIFNK 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT----ST 569
+DL+SLC+ E W + VD+ +L GNL SIA AAL + R P V
Sbjct: 116 GS-LDLKSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVHVLEDEE 174
Query: 570 GDQIIIHSAAEKDPIPMTILHYPVTISYA 598
G + I S D I +++ + P I+
Sbjct: 175 GSKEIELSDDPYDCIQLSVENVPCIITLC 203
>gi|213408869|ref|XP_002175205.1| exosome complex exonuclease RRP43 [Schizosaccharomyces japonicus
yFS275]
gi|212003252|gb|EEB08912.1| exosome complex exonuclease RRP43 [Schizosaccharomyces japonicus
yFS275]
Length = 274
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVA 526
P+ P+ G + N E+ P+ + +F+ G + + +++ + + +++ + LESLC+
Sbjct: 78 PELEAPSRGWIVPNVEMGPLCNGKFKPGPPRELAQVVSEQMNQVLEQTCLVPLESLCIRE 137
Query: 527 EEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ---IIIHSAAEKDP 583
++ W + D+ LNYDGN C A + AL R P V D+ + +H K P
Sbjct: 138 KKAAWCLYADIVCLNYDGNAFDCAWKALMHALETTRLPAVVWDEDEERVVCVHDERAKHP 197
Query: 584 IPMTILHYPVTISYAVFN 601
+ ++ + + S+ VF
Sbjct: 198 LALS--SHIESFSWTVFG 213
>gi|125547390|gb|EAY93212.1| hypothetical protein OsI_15018 [Oryza sativa Indica Group]
Length = 294
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 175 SQKVYASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVAS 230
++ VYASPSR +D + VE + YP +CF++D+F++ F +++ D E CV L A
Sbjct: 64 TKTVYASPSRVNFHLDRRKAVETVPAYPNICFSIDDFDDTFDAVVLSDPEHCYCVILNAH 123
Query: 231 DRAG--------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKF 264
D A K +F G + Y ++ YDA S KF
Sbjct: 124 DGAAFPENTESKNPSSNVLSGVNTGSKQEKPPKRTLFSGYVSYQNVREAYDAGRS---KF 180
Query: 265 TQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
S G + ++++ + M+GP+G+G E+AV+ E +PG
Sbjct: 181 ESLFSLG----HDRTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPG 227
>gi|156363855|ref|XP_001626255.1| predicted protein [Nematostella vectensis]
gi|156213125|gb|EDO34155.1| predicted protein [Nematostella vectensis]
Length = 225
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVA 526
P A PN+G + N +L P+ SP F G ++ + +++ F++ + L+ A
Sbjct: 22 PAADVPNKGFIVPNVDLPPLCSPSFRPGPPSEHAQVLSTFIDNLITKRSMELLQH----A 77
Query: 527 EEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPM 586
+ VW + +DL L+YDGN+ IA LAAL + R VT + + KD I +
Sbjct: 78 KYLVWVLYIDLMCLDYDGNVADAAVIAMLAALQNTRLHTVTINEETETPEPSENKD-IHL 136
Query: 587 TILHYPVTISYAVFN 601
+ PV +++ +F+
Sbjct: 137 KLKSMPVAVTFGIFD 151
>gi|389584408|dbj|GAB67140.1| exosome complex exonuclease [Plasmodium cynomolgi strain B]
Length = 505
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ +++ +V P RP EG++ +N ++ + + + +D + I +E+ K
Sbjct: 50 TKVICKITSEIVKPFDKRPCEGMIKVNLDIDSFTNVN-DNSQISDECLEIKNLIERILKS 108
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+W + V + V+ DGNL C ++A +AL H+R+ +VT
Sbjct: 109 ----------------IWCLLVSIIVIENDGNLYDSCYLSAYSALVHYRNNEVTVDSSGN 152
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFN 601
II E + P++I + P+ ++A FN
Sbjct: 153 IIIEEGETNYTPLSIHNTPILTTFAYFN 180
>gi|403171122|ref|XP_003330351.2| hypothetical protein PGTG_11688 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169041|gb|EFP85932.2| hypothetical protein PGTG_11688 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 281
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 405 MRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNM 464
+R +T H +S+ +DV +SS + ++I + +V C +
Sbjct: 27 LRTDGRTLH---QSRPIHSHSDV--ISSAHASTIVSIGNTSVLC----------AIKFET 71
Query: 465 VIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCV 524
P++ +PN+G L N EL PM P+++ G D + ++ L+ S + L+SL +
Sbjct: 72 AQPESAKPNQGFLVPNVELGPMCCPKYKPGPPPDQAQILATKLKDILISSGFVPLDSLVI 131
Query: 525 VAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT 567
+ VW V +D+ L+ DGNL A +AL R P V+
Sbjct: 132 APGKLVWVVYIDIVCLSNDGNLFDASLSATTSALKSARIPVVS 174
>gi|125589563|gb|EAZ29913.1| hypothetical protein OsJ_13966 [Oryza sativa Japonica Group]
Length = 330
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 175 SQKVYASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVAS 230
++ VYASPSR +D + VE + YP +CF++D+F++ F +++ D E CV L A
Sbjct: 64 TKTVYASPSRVNFHLDRRKAVETVPAYPNICFSIDDFDDTFDAVVLSDPEHCYCVILNAH 123
Query: 231 DRAG--------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNKF 264
D A K +F G + Y ++ YDA S KF
Sbjct: 124 DGAAFPENTESKNPSSNVLSGVNTGSKQEKPPKRTLFSGYVSYQNVREAYDAGRS---KF 180
Query: 265 TQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTKPKGYGVETPTSEPG 315
S G + ++++ + M+GP+G+G E+AV+ E +PG
Sbjct: 181 ESLFSLG----HDRTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPG 227
>gi|432881537|ref|XP_004073829.1| PREDICTED: exosome complex component RRP42-like [Oryzias latipes]
Length = 291
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL + + P+ P+EG L + S A+P+FE + + ++ L + F
Sbjct: 56 TAVLVGIKAEIGKPRPLVPDEGYLEFFVDCSANATPEFEGRGGEELGIELSNTLYRVFNN 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
IDL+ LC+ A E W + VD+ +L DGNL S+A AAL + + P V + D
Sbjct: 116 KNSIDLKGLCISAGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHMSSD 173
>gi|449269974|gb|EMC80708.1| Exosome complex exonuclease RRP43, partial [Columba livia]
Length = 277
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
SI+ +G A+ + + V+ V + P A N+G + N EL + S +F +G
Sbjct: 42 SITTADGSALV--KLGNTTVICGVKAELAAPAADSANKGYIVPNVELPSLCSTRFRSGPP 99
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ + ++F+ + S+ I E LC+ + + W + D+ L+YDGN+L + A LA
Sbjct: 100 GEEAQAASQFIADVIENSQMIAKEDLCIASGKLAWVLYCDIICLDYDGNILDASAFALLA 159
Query: 557 ALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
AL + + P VT ++ + K P+ I +PV S+AVF+
Sbjct: 160 ALKNVQLPSVT-INEETGLSEVNLKQKNPLIIRKHPVATSFAVFD 203
>gi|302830011|ref|XP_002946572.1| hypothetical protein VOLCADRAFT_86657 [Volvox carteri f.
nagariensis]
gi|300268318|gb|EFJ52499.1| hypothetical protein VOLCADRAFT_86657 [Volvox carteri f.
nagariensis]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
+I++ +G A+ + + VL V ++ P T P++G L +N EL+P +S + GRQ
Sbjct: 54 AITSADGSALV--KIGRTTVLGGVRLEIIRPDETAPSQGQLALNVELAPFSSQDYRPGRQ 111
Query: 497 TD-TSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAAL 555
D S + + + L SLC+ + W +DL VL+ DG +L +AA
Sbjct: 112 PDHVSAVTEKLTSALLTGGDAVQLSSLCIAEGKAAWRASLDLYVLDADGCVLDTALLAAT 171
Query: 556 AALAHFRHPDVTST 569
AAL + R P V ST
Sbjct: 172 AALRNTRIPAVRST 185
>gi|241813566|ref|XP_002416505.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp42, putative
[Ixodes scapularis]
gi|215510969|gb|EEC20422.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp42, putative
[Ixodes scapularis]
Length = 290
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + + P ++G + + + A P+FE D + I+ L + ++
Sbjct: 56 TDILVGIKAQLETPDPGSTDQGRIEFFVDCTANADPEFEGRGGEDIAAEISSALAQAYRS 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
KC+DL SL VV ++VW + VD+ +L G+L+ S+A AAL + P V+ T D+
Sbjct: 116 PKCLDLRSLAVVPGQQVWVLYVDILILECGGSLVDAVSVAVKAALYDLKIPKVSVTVDE 174
>gi|59006476|emb|CAI46226.1| hypothetical protein [Homo sapiens]
Length = 248
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 491 FETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCC 550
F +G + + + ++F+ + S+ I E LC+ + VW + DL L+YDGN+L C
Sbjct: 65 FRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILDAC 124
Query: 551 SIAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
+ A LAAL + + P+VT + + +K + I +PV S+AVF+
Sbjct: 125 TFALLAALKNVQLPEVTINEETALAEVNLKKKSY-LNIRTHPVATSFAVFD 174
>gi|171185833|ref|YP_001794752.1| exosome complex RNA-binding protein Rrp42 [Pyrobaculum neutrophilum
V24Sta]
gi|170935045|gb|ACB40306.1| 3' exoribonuclease [Pyrobaculum neutrophilum V24Sta]
Length = 273
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V + P P+EG+L ++AE+ P ASP E G ++++ + R +++ +
Sbjct: 62 THVVAGVKVGLGQPFPDAPDEGVLVVSAEVLPHASPYTEVGPPDESAIELARVVDRGIRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D + L V K + + VDL V+N DGNL+ ++AA+AAL + + P V +Q
Sbjct: 122 CGYVDFKKLAVEG-GKAYILWVDLYVINDDGNLVDAANLAAVAALKNTQLPAVVKE-EQG 179
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTV---PGFTECIQLD--TALALSQDR 628
+ K P+P+ + P+ +S G GS + P E + LD +S+DR
Sbjct: 180 VKLDRNNKTPLPVDLNKAPIAVSI-----GKIGSVLLLDPTLEEELSLDGRITFTISEDR 234
>gi|344255178|gb|EGW11282.1| Exosome complex exonuclease RRP42 [Cricetulus griseus]
Length = 226
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%)
Query: 464 MVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLC 523
M PK +P+EG L + S A+P+FE D I L + F +DL SLC
Sbjct: 1 MGTPKLEKPSEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLSSLC 60
Query: 524 VVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+ E W + VD+ +L GNL SIA AAL + R P V D+
Sbjct: 61 ISPREHCWVLCVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 109
>gi|58259313|ref|XP_567069.1| Opa-interacting protein OIP2 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134107613|ref|XP_777691.1| hypothetical protein CNBA8110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260385|gb|EAL23044.1| hypothetical protein CNBA8110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223206|gb|AAW41250.1| Opa-interacting protein OIP2, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 297
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 426 DVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSP 485
DV S N SIS +G A+ + + ++ V + P A P EG + N +L
Sbjct: 71 DVWRQVSINTGSISTAHGSALV--RMGDTTMVCGVKAEVGEPDAEAPGEGFVVPNIDLPA 128
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
++SP+F+ G D + + +L + SK I L SL + + W + +D+ +NYDGN
Sbjct: 129 LSSPKFKPGPPGDEAQTYSNWLYELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYDGN 188
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGD-QIIIHSAAEKDPIPMTILHYPVTISYAVF 600
+A +AAL + R P D Q I S E+ P+++ P+ S+ +F
Sbjct: 189 AFDAAVLAVMAALRNTRLPKAVYDDDTQRTICSRTER--YPLSLGRMPLACSFGIF 242
>gi|410911694|ref|XP_003969325.1| PREDICTED: exosome complex component RRP42-like [Takifugu rubripes]
Length = 291
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
VL + + P+ PNEG L + S A+P+FE + ++ L + F
Sbjct: 58 VLVGIKTEIGKPRPMVPNEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYRVFNNKH 117
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
IDL+ LC+ E W + VD+ +L DGNL SIA AAL + + P V + D
Sbjct: 118 SIDLKRLCISPGEHCWVLYVDVLLLQCDGNLYDAMSIAIKAALFNTKIPKVFISSD 173
>gi|294461855|gb|ADE76485.1| unknown [Picea sitchensis]
Length = 302
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
+LA V ++ P A +EG + ++ ++ P+ SP GR D + +I+ L S
Sbjct: 69 MLAGVKLEVMTPAAEALDEGRIAVDFQMPPICSPDVRPGRPVDAAAVISEQLSNVLASSG 128
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
I+L+ L + + W +D+ L+ DG L +AA+ A AH R P V+ T + +I
Sbjct: 129 VINLKELSISKGQAAWMAYLDIYCLDADGALFDAALLAAIGAFAHLRFPAVSMTEEGKVI 188
>gi|225430430|ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
gi|296082105|emb|CBI21110.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+A V + P ++P++G + I + SP A+P FE + S ++ L+ C
Sbjct: 54 TDVIASVKAELGKPSPSQPDKGKVNIYVDCSPTAAPMFEGRGGEELSTELSGALQHCLLG 113
Query: 514 SKC-----IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
K IDL SL VV + W++ +D V++ DGNLL A AAL + P V
Sbjct: 114 GKSGAGAGIDLSSLVVVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKV 171
>gi|357122793|ref|XP_003563099.1| PREDICTED: exosome complex component RRP42-like [Brachypodium
distachyon]
Length = 286
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EV+A V + P P++G + I + SP A+P FE D S ++ L++C
Sbjct: 54 TEVIASVKAELGKPTVLHPDKGKVSIYVDCSPTAAPIFEGRGSEDLSAELSVALQRCLLG 113
Query: 514 SK-----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
K IDL SL V+ + W++ +D V++ DGNLL + A AL+ P V
Sbjct: 114 GKSGAGAAIDLSSLIVLEGKACWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPKV 171
>gi|356568754|ref|XP_003552575.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
Length = 301
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 389 DMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSI-----SAENG 443
D+ E++ A+ ++ +R F + ES RA D + TSI + NG
Sbjct: 9 DLSSEVEVDAFKRIFPLRYFER---HLAESIRA----DGRPLGKARETSIFLGAVAFANG 61
Query: 444 EAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMI 503
A+ + + +L + ++ P P+EG L I+ + P+ SP GR + S M+
Sbjct: 62 SALV--KIGSTTMLTAIKMEIMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPMV 119
Query: 504 NRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
++ L S+ DL+ L +V+ + W +D+ L+ DG L ++A+AAL+H +
Sbjct: 120 SKQLSNTISSSRMTDLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAIAALSHLQI 179
Query: 564 PDVTSTGDQIII 575
P + D I+
Sbjct: 180 PSIAMNDDGKIV 191
>gi|242083100|ref|XP_002441975.1| hypothetical protein SORBIDRAFT_08g006250 [Sorghum bicolor]
gi|241942668|gb|EES15813.1| hypothetical protein SORBIDRAFT_08g006250 [Sorghum bicolor]
Length = 287
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+E++A V + P P++G + I + SP A P FE + S ++ L++C
Sbjct: 55 TEIIASVKAELGKPSILHPDKGKVSIFVDCSPTAEPMFEGRGSEELSAELSAALQRCLLG 114
Query: 514 SK-----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K IDL SL VV + W++ +D V++ DGNLL + A AL+ P V
Sbjct: 115 GKSGSGAAIDLSSLIVVEGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPKV-- 172
Query: 569 TGDQIIIHSAAEKDP 583
+ + +A+E++P
Sbjct: 173 ---NVSVSAASEEEP 184
>gi|390344513|ref|XP_791327.3| PREDICTED: exosome complex component RRP42-like [Strongylocentrotus
purpuratus]
Length = 150
Score = 60.1 bits (144), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT-SVMINRFLEKCFKES 514
VL V M P P+ G + + S ASP+F GR D + I+ L +K
Sbjct: 12 VLVGVKAEMGPPNPLNPSRGGIEFFVDFSANASPKF-AGRGGDELAAEISNMLGLVYKNK 70
Query: 515 KCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRH 563
K +D +SLCV+A + VW + D+ VL GNLL ++A AAL + R+
Sbjct: 71 KMLDYKSLCVIAGQCVWTLYADIVVLECGGNLLDAIALAVKAALYNTRY 119
>gi|449477436|ref|XP_004155022.1| PREDICTED: exosome complex component RRP42-like [Cucumis sativus]
Length = 286
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
IS NG A + +EV+A V + P +P++G + I+ + SP A P FE
Sbjct: 40 ISQANGSARV--RMGGTEVIATVKAELGRPNPMQPDKGKVSISVDCSPTAEPAFEGRGGE 97
Query: 498 DTSVMINRFLEKCFKESKC-----IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSI 552
+ S ++ LE+C K IDL SL VV + W++ ++ V++ +GNLL
Sbjct: 98 ELSTELSIALERCLLGGKSGSGAGIDLSSLIVVEGKLCWDLYIEGLVVSSEGNLLDALGA 157
Query: 553 AALAALAHFRHPDVTSTGDQIIIHSAAE 580
A AAL++ P V H AAE
Sbjct: 158 AIKAALSNTGIPKV---------HVAAE 176
>gi|391336427|ref|XP_003742582.1| PREDICTED: exosome complex component RRP42-like [Metaseiulus
occidentalis]
Length = 289
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 434 NWTSISAENGEAVWCPW-----VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMAS 488
++ I E G A C + ++VL + + P P+ G + +L+ A
Sbjct: 31 DYRHIELELGAAPNCSGSSHVRIANTDVLVGIKAEIAAPDHAAPDRGRIEFFVDLTANAD 90
Query: 489 PQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLG 548
P+FE + I L + + + +DL SLC+V ++VW + VD+ +L G+L
Sbjct: 91 PEFEGTGGDELGQQIAGALAEAYVSKRFLDLSSLCIVKNQQVWVLFVDILILELGGSLYD 150
Query: 549 CCSIAALAALAHFRHPDVT 567
SIA AAL R P +T
Sbjct: 151 AVSIAVKAALYDLRIPKLT 169
>gi|449467882|ref|XP_004151651.1| PREDICTED: exosome complex exonuclease RRP42-like, partial [Cucumis
sativus]
Length = 195
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Query: 438 ISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQT 497
IS NG A + +EV+A V + P +P++G + I+ + SP A P FE
Sbjct: 40 ISQANGSARV--RMGGTEVIATVKAELGRPNPMQPDKGKVSISVDCSPTAEPAFEGRGGE 97
Query: 498 DTSVMINRFLEKCFKESKC-----IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSI 552
+ S ++ LE+C K IDL SL VV + W++ ++ V++ +GNLL
Sbjct: 98 ELSTELSIALERCLLGGKSGSGAGIDLSSLIVVEGKLCWDLYIEGLVVSSEGNLLDALGA 157
Query: 553 AALAALAHFRHPDVTSTGDQIIIHSAAE 580
A AAL++ P V H AAE
Sbjct: 158 AIKAALSNTGIPKV---------HVAAE 176
>gi|357145083|ref|XP_003573518.1| PREDICTED: exosome complex component RRP42-like [Brachypodium
distachyon]
Length = 286
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EV+A V + P P++G + I + SP A+P FE D S ++ L++C
Sbjct: 54 TEVIASVKAELGKPTVLHPDKGKVSIYVDCSPTAAPIFEGRGSEDLSAELSVALQRCLLG 113
Query: 514 SK-----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
K IDL SL V+ + W++ VD V++ DGNL+ + A AL+ P V
Sbjct: 114 GKSGAGAAIDLSSLIVLEGKACWDLYVDGLVVSSDGNLVDALAAAIKVALSDTGIPKV 171
>gi|363543527|ref|NP_001241774.1| exosome complex exonuclease RRP42 [Zea mays]
gi|195636336|gb|ACG37636.1| exosome complex exonuclease RRP42 [Zea mays]
Length = 287
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+E++A V + P P++G + I + SP A P FE + S ++ L++C
Sbjct: 54 TEIIASVKAELGKPSILHPDKGKVAIFVDCSPTAEPLFEGRGSEELSAELSVSLQRCLLG 113
Query: 514 SK-----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K IDL SL VV + W++ +D V++ DGNLL ++A AL+ P V
Sbjct: 114 GKSGAGAAIDLSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAVAIKVALSDTGIPKV-- 171
Query: 569 TGDQIIIHSAAEKDP 583
+ + +A++++P
Sbjct: 172 ---NVSVSAASDEEP 183
>gi|194707850|gb|ACF88009.1| unknown [Zea mays]
gi|223975603|gb|ACN31989.1| unknown [Zea mays]
gi|413935071|gb|AFW69622.1| exosome complex exonuclease RRP42 isoform 1 [Zea mays]
gi|413935072|gb|AFW69623.1| exosome complex exonuclease RRP42 isoform 2 [Zea mays]
gi|413935073|gb|AFW69624.1| exosome complex exonuclease RRP42 isoform 3 [Zea mays]
Length = 287
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+E++A V + P P++G + I + SP A P FE + S ++ L++C
Sbjct: 54 TEIIASVKAELGKPSILHPDKGKVAIFVDCSPTAEPLFEGRGSEELSAELSVSLQRCLLG 113
Query: 514 SK-----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K IDL SL VV + W++ +D V++ DGNLL ++A AL+ P V
Sbjct: 114 GKSGAGAAIDLSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAVAIKVALSDTGIPKV-- 171
Query: 569 TGDQIIIHSAAEKDP 583
+ + +A++++P
Sbjct: 172 ---NVSVSAASDEEP 183
>gi|321475502|gb|EFX86465.1| hypothetical protein DAPPUDRAFT_222073 [Daphnia pulex]
Length = 290
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
S++L V + P +P EG L + S A+P+FE D + I RFL++ +
Sbjct: 56 SDILVGVKVELASPLPDKPQEGRLEFFVDCSANATPEFEGRGGEDLANEICRFLQRSYAS 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV---TSTG 570
I+L L V+ ++ W + VD+ +L GNL S+A +AL + P + T G
Sbjct: 116 GDTINLSELSVLTGQQCWVLYVDILILECGGNLYDAVSLAVKSALYATQIPSIKVATMDG 175
Query: 571 DQ 572
DQ
Sbjct: 176 DQ 177
>gi|194757229|ref|XP_001960867.1| GF11284 [Drosophila ananassae]
gi|190622165|gb|EDV37689.1| GF11284 [Drosophila ananassae]
Length = 296
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTSI-SAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T H +E R + D+ E T + S +G A + +++L V + +P
Sbjct: 12 TFILHGVEEDFRCDGRSRRDYRPMELETGVVSNASGSARL--RLANTDILVGVKTEIDVP 69
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P G L + S A+P FE +D + + L+ ++ + D SLC++
Sbjct: 70 SPLAPEYGKLEFFVDCSANATPDFEGRGGSDLAQELILSLQNAYESPQAFDYRSLCLIPG 129
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
++ W + +D+ VL GNL S+AA AAL + + P VT+T
Sbjct: 130 QQCWKLYIDILVLECGGNLHDAVSLAAKAALFNTKLPRVTAT 171
>gi|8778735|gb|AAF79743.1|AC009317_2 T30E16.4 [Arabidopsis thaliana]
Length = 600
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 33/173 (19%)
Query: 72 TSYWTDLFVRYFLFQTDSNIDCDD-LLFFVRKKYIKTSSRNLPKFETEVEVFRKDSRKLP 130
+++W +F YF+ +S DD LLFFVRK K+ + R+ + KL
Sbjct: 175 SNFWHGVFDVYFVRCMESRRRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLD 234
Query: 131 --IGD--PDVDWEETVYLNMIIHQFDYTLTLAICTRTSPKHLQVLK--------RHSQKV 178
+G+ +VDW ++ YLNMI H +T+T+AIC+ + K Q K + + V
Sbjct: 235 ELLGESLAEVDWRKSFYLNMIAHT-SFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTV 293
Query: 179 YASPSRR--RMDTKG----------------EVEEM-TYPCVCFTVDNFNEVF 212
YASPSR +D+K EVE YP +CF VD+F+ F
Sbjct: 294 YASPSRVNFHLDSKKASIVAFLIPMFVLLEFEVETTPAYPEICFAVDDFDSTF 346
>gi|194694796|gb|ACF81482.1| unknown [Zea mays]
gi|414869689|tpg|DAA48246.1| TPA: hypothetical protein ZEAMMB73_220271 [Zea mays]
Length = 218
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 482 ELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLN 541
+ P+ SP GR TD + +I++ LE S ++L+ LC++ + W +D+ LN
Sbjct: 13 HMPPICSPLVRPGRPTDVAPVISKALEDVLTSSGMLNLKDLCLITGKASWLAYLDIYCLN 72
Query: 542 YDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
DG+L I+A+AA H P + S GD
Sbjct: 73 ADGSLFDAALISAVAAFTHLEIP-LVSVGD 101
>gi|449532897|ref|XP_004173414.1| PREDICTED: uncharacterized protein KIAA0930 homolog, partial
[Cucumis sativus]
Length = 253
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 39/157 (24%)
Query: 176 QKVYASPSRR--RMDTKGEVEEM-TYPCVCFTVDNFNEVFHDILVRDGEMV-CVELVASD 231
+ VYASPSR +D+K EVE YP +CF VD+F+ F +++ + + CV L A D
Sbjct: 23 KTVYASPSRVNFHLDSKKEVETTPAYPDICFAVDDFDSTFDAVVLTETDHCYCVLLNAHD 82
Query: 232 RAG----------------------------SVKSVIFLGSIRYDALKRVYDARTSVSNK 263
A + K +F G + Y ++ YDA S +
Sbjct: 83 GAAFPAKDNAENCNSSNFVASSLDSDSQNTKNSKITLFSGFVSYQMVRDAYDAGKS---R 139
Query: 264 FTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVT 300
F +S G +++ + + + MKGP G+G E+AV+
Sbjct: 140 FGSLLSLG----HASGKTDKIYMKGPGGRGEVEVAVS 172
>gi|321250323|ref|XP_003191768.1| ribosomal RNA-processing protein 43 [Cryptococcus gattii WM276]
gi|317458235|gb|ADV19981.1| Ribosomal RNA-processing protein 43, putative [Cryptococcus gattii
WM276]
Length = 303
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 426 DVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSP 485
D+ S N SIS +G A+ + + ++ V + P P EG + N +L
Sbjct: 70 DIWRQVSINTGSISTAHGSALVR--MGDTTMVCGVKAEIGEPDTETPGEGFVVPNIDLPA 127
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
++SP+F+ G D + + +L + SK I L SL + + W + +D+ +NYDGN
Sbjct: 128 LSSPRFKPGPPGDEAQTYSNWLNELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYDGN 187
Query: 546 LLGCCSIAALAALAHFRHPDVTSTGD-QIIIHSAAEKDPIPMTILHYPVTISYAVF 600
+A +AAL + R P D Q I S E+ P+ + P++ S+ +F
Sbjct: 188 AFDAAVLAVMAALRNTRLPKAVYDDDTQRAICSRTER--YPLKLGRMPLSCSFGIF 241
>gi|126459545|ref|YP_001055823.1| exosome complex RNA-binding protein Rrp42 [Pyrobaculum calidifontis
JCM 11548]
gi|126249266|gb|ABO08357.1| ribosomal RNA-processing protein RRP42 [Pyrobaculum calidifontis
JCM 11548]
Length = 274
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ V+A V + P P+EG+L +NAE+ P ASP E G + ++ + R +++ +
Sbjct: 62 THVVAGVKIGLGQPFPDAPDEGVLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGLRH 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+D + L V K + + VDL V+N DGNL+ ++AA+AAL + P V
Sbjct: 122 CGYVDFKKLSVEG-GKAYVLWVDLYVINDDGNLVDAANLAAVAALKNAALPAVVKDETGA 180
Query: 574 IIHSAAEKDPIPMTILHYPVTIS 596
+ + P+P+ + P+ +S
Sbjct: 181 VKLDRNSRTPMPLDLEKAPIAVS 203
>gi|15218985|ref|NP_176216.1| 3' exoribonuclease domain 1-containing protein [Arabidopsis
thaliana]
gi|4249388|gb|AAD14485.1| Similar to gb|AF025438 Opa-interacting protein (OIP2) from Homo
sapiens [Arabidopsis thaliana]
gi|28416659|gb|AAO42860.1| At1g60080 [Arabidopsis thaliana]
gi|110735926|dbj|BAE99938.1| hypothetical protein [Arabidopsis thaliana]
gi|332195536|gb|AEE33657.1| 3' exoribonuclease domain 1-containing protein [Arabidopsis
thaliana]
Length = 302
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 387 AGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAV 446
A D+ E++ A+ ++ +R F + Q D + N +S +G A+
Sbjct: 7 AQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIV--NLGLVSTADGSAL 64
Query: 447 WCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRF 506
+ + +LA + ++ P P+EG + I + P+ SP GR + + +I++
Sbjct: 65 A--KIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKR 122
Query: 507 LEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
L S IDL+ LC+V+ + W +D+ L+ DG L +AA+AA ++ + P V
Sbjct: 123 LSDTILSSGMIDLKELCLVSGKAAWMGYLDIYCLDADGALFDAALLAAVAAFSNLQIPIV 182
Query: 567 TSTGDQIIIHSAAEKD 582
+ I+ EKD
Sbjct: 183 ALNDNGRIVAVTGEKD 198
>gi|170091308|ref|XP_001876876.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648369|gb|EDR12612.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 276
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SIS +G A+ + + V+ V + P+ G L N +L M SP+F+
Sbjct: 43 NVGSISTADGSALV--RLGNTTVVCGVKAEIAEPELDEGVRGFLVPNLDLPAMCSPRFKP 100
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G ++ + +++ L S + L SL + + W + VD +NYDGN+ IA
Sbjct: 101 GPPSEEAQVLSDRLNDALVASNILPLTSLSIHPNKAAWVLYVDAICINYDGNVFDAALIA 160
Query: 554 ALAALAHFRHPDVT---STGDQIIIHSAAEKDPIPMTILH--YPVTISYAVFNGGSEGST 608
+ AL + + P T TG + + K +P+ + H PV +S+ VF+ +
Sbjct: 161 MVEALRNTQLPKATYDEETGRT----TCSRKIKVPLELNHTSLPVPLSFGVFDSTHVLAD 216
Query: 609 VPGFTECIQLDTALAL 624
F E + LDT +++
Sbjct: 217 PTSFEEPL-LDTTISI 231
>gi|114052969|ref|NP_001040497.1| exosc7 protein [Bombyx mori]
gi|95103140|gb|ABF51511.1| exosc7 protein [Bombyx mori]
Length = 277
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 413 HFWKESKRAQDWTDVDFMSSENWTSI-SAENGEAVWCPWVKPSEVLAQVSCNMVIPKATR 471
H +E R+ +++D+ E T + S +G A + +++L + + PK +
Sbjct: 16 HGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARL--RLANTDILVGIKTEIDTPKPDK 73
Query: 472 PNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVW 531
P+ G + + S A+P+FE + + I+ +++ + S+ DL+ LC+V ++ W
Sbjct: 74 PDMGKIEFLVDGSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCW 133
Query: 532 NVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
+ VD+ +L GN S+A AAL + R P V +
Sbjct: 134 KLYVDILILECGGNWFDAVSLATKAALFNTRIPLVKA 170
>gi|224138050|ref|XP_002322717.1| predicted protein [Populus trichocarpa]
gi|222867347|gb|EEF04478.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 45/232 (19%)
Query: 387 AGDMRDELDDGAYNPLWTMRGFTQTFHFWKESK-------RAQDWTDVDFMSSENWTSIS 439
+GD+ E++ A+ L+ +R F + H + + RA+D T +++
Sbjct: 7 SGDLSSEMEVDAFRHLFPLRYFER--HLSESIRPDARPLGRARDTTLA-------LGAVA 57
Query: 440 AENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT 499
+ +G A+ + + +LA + ++ P P+EG + I+ + P+ SP GR +
Sbjct: 58 SAHGSAL--AKIGSTTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEA 115
Query: 500 SVMINRFLEKCFKE--------------------SKCIDLESLCVVAEEKVWNVRVDLNV 539
+ +I++ L S I+L+ L +V+ + W +D+
Sbjct: 116 APVISKQLSDTISRQVKFSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYC 175
Query: 540 LNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII-------HSAAEKDPI 584
L+ DG L ++A+AA +H + P V+ D I+ + EK+P+
Sbjct: 176 LDADGALFDAALLSAVAAFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPV 227
>gi|224090167|ref|XP_002308947.1| predicted protein [Populus trichocarpa]
gi|222854923|gb|EEE92470.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 387 AGDMRDELDDGAYNPLWTMRGFTQTFHFWKESK-------RAQDWTDVDFMSSENWTSIS 439
+GD+ E++ A+ L+ +R F + H + + RA+D T +++
Sbjct: 7 SGDLSSEMEVDAFRRLFPLRYFER--HLSESIRPDARPLGRARDTT-------LALGAVA 57
Query: 440 AENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT 499
+ +G A+ + + +LA + ++ P P EG + I+ + P+ SP GR +
Sbjct: 58 SAHGSALA--KIGSTTMLAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEA 115
Query: 500 SVMINRFLEKCFKE---SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALA 556
+ +I++ L S I+L+ L +V+ + W +D+ L+ DG L ++A+
Sbjct: 116 APVISKQLSDTISRQVNSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVG 175
Query: 557 ALAH 560
A +H
Sbjct: 176 AFSH 179
>gi|242097164|ref|XP_002439072.1| hypothetical protein SORBIDRAFT_10g031070 [Sorghum bicolor]
gi|241917295|gb|EER90439.1| hypothetical protein SORBIDRAFT_10g031070 [Sorghum bicolor]
Length = 286
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+E++A V + P P++G + I + SP A P FE + S ++ L++C
Sbjct: 54 TEIIASVKAELGKPSILHPDKGKVSIFVDCSPTAEPMFEGRGSEELSAELSVSLQRCLLG 113
Query: 514 SK-----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTS 568
K IDL SL VV + W++ +D V++ DGNLL + A AL+ P V
Sbjct: 114 GKSGAGAAIDLSSLIVVEGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPKV-- 171
Query: 569 TGDQIIIHSAAEKDP 583
+ +++A++++P
Sbjct: 172 ---NVSVNAASDEEP 183
>gi|307111676|gb|EFN59910.1| hypothetical protein CHLNCDRAFT_132943 [Chlorella variabilis]
Length = 301
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKC 510
V + LA + C ++ A P EG L + EL+P+ S GR ++ + ++ L
Sbjct: 46 VGSTAALAGIKCEVMPASADTPEEGRLALQVELAPLCSADTRPGRPSEAAAVLTEQLSSL 105
Query: 511 FKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNL 546
+ + +D LC+ + W V VD+ VL+ DG+L
Sbjct: 106 LEGAGVVDRRQLCIDPGKAAWAVYVDVYVLDADGSL 141
>gi|198426220|ref|XP_002120565.1| PREDICTED: similar to Exosome complex exonuclease RRP43 (Ribosomal
RNA-processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) [Ciona intestinalis]
Length = 279
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Query: 414 FWKESKRAQDWTDVDFM-SSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRP 472
F KE+ R T ++ N I+ +G A+ + + V+ V + P A P
Sbjct: 17 FLKENIRPDTRTLQQIRKTTLNVGPITTADGSALV--KIGNTMVMCGVKAELTQPTAEEP 74
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
+G++ N +L + S +F+ G + + +FL+ K + ++ E LC+V ++ VW
Sbjct: 75 KKGIIVPNLDLPALCSSKFKPGPPNTQAQVGTKFLDNLIKIANLVNSEDLCIVPDKLVWV 134
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ-IIIHSAAEKDPIPMTILHY 591
+ D+ LNYDG ++ +A +AAL P VT + + + EK P+TI
Sbjct: 135 LYCDVTCLNYDGCVIDAAVVALVAALRSVSLPSVTLNEETDTPVTNINEK--TPLTINCL 192
Query: 592 PVTISYAVF 600
PV S++ F
Sbjct: 193 PVASSFSFF 201
>gi|414868038|tpg|DAA46595.1| TPA: hypothetical protein ZEAMMB73_803115 [Zea mays]
Length = 231
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 94 DDLLFFVRKKYIKTSSRN-----LPKFETEVEVFRKDSRKLPIGDPDVDWEETVYLNMII 148
DDL+FFV + N P F V + K+ I +VDWE + YLN+I
Sbjct: 88 DDLVFFVNNMKLHGYGFNDNMEDPPPFF--VRRWAPTLEKISINTVEVDWERSFYLNLIA 145
Query: 149 HQFDYTLTLAIC-------TRTSPKHLQVLKRHSQKVYASPSR--RRMDTKGEVEEM-TY 198
H YT+T+AI K L + + ++ VYASPSR +D + VE + Y
Sbjct: 146 HT-SYTVTVAIFGIEDLRNRAVKNKQLPPVYKVTKNVYASPSRVNFHLDRRKAVETLPAY 204
Query: 199 PCVCFTVDNFNEVFHDILVR 218
P + F+VD+F++ F D +VR
Sbjct: 205 PNIFFSVDDFDDTF-DAVVR 223
>gi|195620544|gb|ACG32102.1| exosome complex exonuclease RRP42 [Zea mays]
gi|413935080|gb|AFW69631.1| exosome complex exonuclease RRP42 isoform 1 [Zea mays]
gi|413935081|gb|AFW69632.1| exosome complex exonuclease RRP42 isoform 2 [Zea mays]
gi|413935082|gb|AFW69633.1| exosome complex exonuclease RRP42 isoform 3 [Zea mays]
gi|413935083|gb|AFW69634.1| exosome complex exonuclease RRP42 isoform 4 [Zea mays]
Length = 287
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 405 MRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG---EAVWCPWVK--PSEVLAQ 459
M G ++ + AQD D + S+S + G +A V+ ++++A
Sbjct: 1 MVGLSEGEKHFIRGGIAQDLR-TDGRRRLQFRSLSVQTGVIPQANGSARVRLGATDIIAS 59
Query: 460 VSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK---- 515
V + P P++G + I + SP A P FE + S ++ L++C K
Sbjct: 60 VKAELGKPSILHPDKGKVAIFVDCSPTAEPLFEGRGSEELSAELSVSLQRCLLGGKSGAG 119
Query: 516 -CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQII 574
IDL SL VV + W++ +D V++ DGNLL ++A AL+ P V +
Sbjct: 120 AAIDLSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAVAIKVALSDTGIPKV-----NVS 174
Query: 575 IHSAAEKDP 583
+ +A++++P
Sbjct: 175 VSAASDEEP 183
>gi|145344856|ref|XP_001416940.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577166|gb|ABO95233.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 285
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 83/222 (37%), Gaps = 23/222 (10%)
Query: 394 LDDGAYNPLWTMRGFTQTFHFWKES-----KRAQDWTDVDFMSSENWTSISAENGEAVWC 448
++ AY L+ +T RA+ T ++S S A++G C
Sbjct: 1 MESAAYARLYPREACEKTLASGARGDGRPLGRARARTCATGVASGALGSALAKHGATTAC 60
Query: 449 PWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLE 508
A V+ + P ATRP EG L I + +P AS GR
Sbjct: 61 ---------AGVTATIATPDATRPEEGFLEIAVDHAPQASEDARDGRTRGRREAAAAACA 111
Query: 509 KCFKESKCI--DLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+ + DL+ LCV W VRVD+ VL DG C A +AAL P+V
Sbjct: 112 SAVANAAVLGKDLKQLCVERGTFAWRVRVDVIVLCDDGGAADCAVTAVMAALRDCVLPEV 171
Query: 567 TST-------GDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
T GD ++ + + + PV ++ A++
Sbjct: 172 AVTRGKVALEGDGTAMNGDGVRKGTRLDVQTMPVCLTTALYR 213
>gi|225441838|ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
Length = 303
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 387 AGDMRDELDDGAYNPLWTMRGFTQTFHF------WKESKRAQDWTDVDFMSSENWTSISA 440
+GD+ E++ A+ L+ +R + + F + RA+D +S ++++
Sbjct: 7 SGDLSSEMEVDAFRRLFPLR-YHERFLLDSIRPDARPLGRARD-------TSLALGAVAS 58
Query: 441 ENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTS 500
+G A+ + + +LA V ++ P P+EG + I + P+ SP GR + +
Sbjct: 59 ADGSALA--KIGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEA 116
Query: 501 VMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAH 560
++++ L S I+L+ L +V+ + W +D+ L+ DG+L +AA+AA +H
Sbjct: 117 PVVSKQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSH 176
Query: 561 FRHPDVT 567
R P V+
Sbjct: 177 LRIPVVS 183
>gi|221114702|ref|XP_002157039.1| PREDICTED: exosome complex component RRP42-like [Hydra
magnipapillata]
Length = 279
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+ VL V + P ++PN G + + S ASP FE + + ++ L+ F
Sbjct: 56 TNVLIGVKAEISEPLPSKPNLGKVEFFVDCSANASPIFEGRGGDELAFELSAALQNTF-- 113
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
S IDLE LC++ + W + +D VL GNL SIA AAL + R P ++
Sbjct: 114 SGAIDLEKLCIIPGKACWILYIDALVLECGGNLFDALSIAVKAALHNTRIPTLS------ 167
Query: 574 IIHSAAEK------DP---IPMTILHYPVTIS 596
II AEK DP P+ + + PV ++
Sbjct: 168 IIGEGAEKSIEVSDDPYNSTPIDVSNIPVLVT 199
>gi|195383888|ref|XP_002050657.1| GJ22278 [Drosophila virilis]
gi|194145454|gb|EDW61850.1| GJ22278 [Drosophila virilis]
Length = 296
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTS-ISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T H +E R + D+ E T +S +G A + +++L V + +P
Sbjct: 12 TFILHGVEEDFRCDGRSRRDYRPMELETGLVSNASGSARL--RLANTDILVGVKTEIDVP 69
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P G L + S A+P+FE +D + + L+ ++ D +LC++
Sbjct: 70 NPLTPQFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPFAFDYRTLCLIPG 129
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
++ W + +D+ +L GNL S+AA AAL + + P VT+T
Sbjct: 130 QQCWKLYIDILILECGGNLYDAVSLAAKAALYNTKLPRVTAT 171
>gi|115488270|ref|NP_001066622.1| Os12g0403800 [Oryza sativa Japonica Group]
gi|108862543|gb|ABA97522.2| 3' exoribonuclease family, domain 1 containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649129|dbj|BAF29641.1| Os12g0403800 [Oryza sativa Japonica Group]
gi|215693833|dbj|BAG89032.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641114|gb|EEE69246.1| hypothetical protein OsJ_28497 [Oryza sativa Japonica Group]
Length = 284
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 405 MRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENG---EAVWCPWVK--PSEVLAQ 459
M G ++ + AQD D + +IS E G +A V+ +EV+A
Sbjct: 1 MVGLSEGEKHFIRGGIAQDLR-TDGRRRLQFRAISVETGVIPQANGSARVRLGATEVIAT 59
Query: 460 VSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK---- 515
V + P P++G + I + SP A+P FE + S + L++C K
Sbjct: 60 VKAELGKPSILHPDKGKVSIFVDCSPTAAPMFEGRGSEEFSAELCVALQRCLLGGKSGAG 119
Query: 516 -CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
IDL SL VV + W++ +D V++ DGNLL + A AL+ P V
Sbjct: 120 AAIDLSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPKV 171
>gi|427787609|gb|JAA59256.1| Putative exosomal 3'-5' exoribonuclease complex subunit rrp42
[Rhipicephalus pulchellus]
Length = 289
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + + P + P+ G + + + A P FE + + I L + +
Sbjct: 56 TDILVGIKAELDAPDPSAPHLGRVEFFVDCTANADPVFEGRGGEEIATEIRSALARTYSS 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
KC+DL+SL VV ++ W + VD+ +L G+L+ S+A AAL + P V+ T D+
Sbjct: 116 PKCLDLKSLAVVPGQQAWVLYVDVLILECGGSLIDAVSVAVKAALYDLKIPKVSVTIDE 174
>gi|126338806|ref|XP_001378422.1| PREDICTED: uncharacterized protein KIAA0930-like [Monodelphis
domestica]
Length = 464
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 3/45 (6%)
Query: 257 RTSVSNKFTQRMSFGIFSNNSNSRIEFVKMKGPQGKGFAEMAVTK 301
+ SV+ K QRMSFG + N+ +EFV+MKGPQGKG AEMAV++
Sbjct: 280 KVSVAAKMAQRMSFGFYKYNN---MEFVRMKGPQGKGHAEMAVSR 321
>gi|195121612|ref|XP_002005314.1| GI19145 [Drosophila mojavensis]
gi|193910382|gb|EDW09249.1| GI19145 [Drosophila mojavensis]
Length = 296
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTS-ISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T H +E R + D+ E T +S +G A + +++L V + +P
Sbjct: 12 TFILHGVEEDFRCDGRSRRDYRPMELETGLVSNASGSARL--RLANTDILVGVKTEIDVP 69
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P G L + S A+P+FE +D + + L+ ++ D +LC++
Sbjct: 70 NPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPYAFDYRTLCLIPG 129
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
++ W + +D+ +L GNL S+AA AAL + + P VT+T
Sbjct: 130 QQCWKLYIDILILECGGNLHDAVSLAAKAALYNTKLPRVTAT 171
>gi|346467463|gb|AEO33576.1| hypothetical protein [Amblyomma maculatum]
Length = 215
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 434 NWTSISAENGEAVWCPWVKP--SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQF 491
N SIS +G A+ VK + V+ V + P P +G +
Sbjct: 28 NIGSISTADGSAL----VKMGCTTVVCGVKAELAEPAVAMPKQG---------------Y 68
Query: 492 ETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCS 551
G + + ++++ + S +DLE LC+ + VW++ VDL L+YDGN+ C
Sbjct: 69 XXGPPGEQAQVLSKLMLDILTSSDSLDLEKLCIEEGKLVWSLNVDLTCLDYDGNVAEACI 128
Query: 552 IAALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFNGGSEGSTVPG 611
+AA AAL P V +T ++ + E+ + P+ ++AV +
Sbjct: 129 LAATAALCSLTLPKVLTTDGEVNVLLEREE----AKVTEGPLAATFAVLADDTIVVDPTH 184
Query: 612 FTECIQLDT-ALALSQDRQKLGV 633
EC+ +T + L+ D + GV
Sbjct: 185 EEECLAAETFTVILNADNKICGV 207
>gi|195488381|ref|XP_002092290.1| GE11745 [Drosophila yakuba]
gi|194178391|gb|EDW92002.1| GE11745 [Drosophila yakuba]
Length = 296
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V + +P P+ G L + S A+P+FE +D + + L+ ++
Sbjct: 56 TDILVGVKTEIDVPNPLTPDFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYES 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
D +LC++ ++ W + +D+ +L GNL S+AA AAL + + P VT+T
Sbjct: 116 PLAFDYRTLCLIPGQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVTAT 171
>gi|303286137|ref|XP_003062358.1| 3' exoribonuclease [Micromonas pusilla CCMP1545]
gi|226455875|gb|EEH53177.1| 3' exoribonuclease [Micromonas pusilla CCMP1545]
Length = 301
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 475 GLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVR 534
G++ + EL PM + GR T+ S R +E +++ +DL LC+ W V
Sbjct: 78 GVVEVTVELPPMCAASARPGRPTEESQRCARRIEDVLRDANVVDLRKLCIKRGVYAWRVC 137
Query: 535 VDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
VD+ VL++DG +L A + AL + P V
Sbjct: 138 VDVYVLDHDGGILDAALCAVVGALKDAKVPRV 169
>gi|125811424|ref|XP_001361870.1| GA21043 [Drosophila pseudoobscura pseudoobscura]
gi|54637046|gb|EAL26449.1| GA21043 [Drosophila pseudoobscura pseudoobscura]
Length = 296
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTS-ISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T H +E R + D+ E T +S +G A + +++L + + +P
Sbjct: 12 TFILHGVEEDFRCDGRSRRDYRPMELETGLVSNSSGSARL--RLANTDILVGIKTEIDVP 69
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P G L + S A+P+FE +D + + LE ++ D +LC++
Sbjct: 70 DPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELVLALENAYESPLAFDYRTLCLIPG 129
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
++ W + +D+ +L GNL S+AA AAL + + P VT++
Sbjct: 130 QQCWKLYIDILILECGGNLHDAVSLAAKAALHNTKLPQVTAS 171
>gi|193645775|ref|XP_001952675.1| PREDICTED: exosome complex exonuclease RRP42-like [Acyrthosiphon
pisum]
Length = 289
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 402 LWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVS 461
++ + G + F S+ QD+ ++ +S NG A + S++L V
Sbjct: 12 VYIIHGVEENFRCDGRSR--QDYRPLEL----EMDIVSNANGSARL--RLANSDILVCVK 63
Query: 462 CNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLES 521
+ P P +G + + S A+P FE + ++RFL C +L
Sbjct: 64 VEIDTPLPEAPKDGKIEYFVDCSANATPAFEGRGGEHLAAELSRFL--CLAHGPVFNLSK 121
Query: 522 LCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
LC+V + W + VD+ +L GNL S+AA AAL + P++ T
Sbjct: 122 LCIVPGQSCWKLFVDVLILECGGNLFDAVSLAAKAALCNTSLPNIVGT 169
>gi|449463354|ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
gi|449503802|ref|XP_004162184.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
Length = 304
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 381 GVAEIEAGDMRDELDDGAYNPLWTM----RGFTQTFHF-WKESKRAQDWTDVDFMSSENW 435
G+ +GD+ +++ A+ L+ + R T++ + +A+D T
Sbjct: 2 GLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIA-------L 54
Query: 436 TSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGR 495
+S+ NG A+ + + +LA + ++ P P+EG + ++ + P+ SP GR
Sbjct: 55 GPVSSANGSALA--KIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGR 112
Query: 496 QTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAAL 555
+ + +I++ L S IDL L +V + W +D+ L+ DG+L ++A
Sbjct: 113 PAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA 172
Query: 556 AALAHFRHPDVTSTGDQIIIHSAAEK 581
AA +H + P V D ++ E+
Sbjct: 173 AAFSHLQIPVVALNDDGKVVFVCEEE 198
>gi|223997282|ref|XP_002288314.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975422|gb|EED93750.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 576
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 46/180 (25%)
Query: 467 PKATRPNEGLLFINAELSPMASPQFETGR----------------------------QTD 498
P A RPN+G + E+ PM +E Q
Sbjct: 84 PNADRPNDGQVKFGVEVGPMGCMGYEVVAPVSNYGIGDAVDGGQVGSGGGGGDVPYVQRL 143
Query: 499 TSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAAL 558
S I R LE+ ID E+LCV + VW + VD+++L+ GN + C +AA+AAL
Sbjct: 144 KSNRILRLLERTLLIGGSIDAEALCVQSGVWVWRLHVDVSLLDDGGNSMDACVLAAVAAL 203
Query: 559 AHFRHPDV---------------TSTGDQ--IIIHSAAEKDPIPMTILHYPVTISYAVFN 601
H+R P+V + G Q IIHS +++P P+ + H P+T ++A+F+
Sbjct: 204 RHYRLPEVDIGGGDGNDDGDDNANNIGYQETTIIHS-DDREPTPLPLHHTPLTATFALFS 262
>gi|194882669|ref|XP_001975433.1| GG20559 [Drosophila erecta]
gi|190658620|gb|EDV55833.1| GG20559 [Drosophila erecta]
Length = 296
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L V + +P P G L + S A+P+FE +D + + L+ ++
Sbjct: 56 TDILVGVKTEIDVPNPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYES 115
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
D +LC++ ++ W + +D+ +L GNL S+AA AAL + + P VT+T
Sbjct: 116 PLAFDYRTLCLIPGQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVTAT 171
>gi|195029661|ref|XP_001987690.1| GH22060 [Drosophila grimshawi]
gi|193903690|gb|EDW02557.1| GH22060 [Drosophila grimshawi]
Length = 296
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTS-ISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T H +E R + D+ E T +S +G A + +++L V + +P
Sbjct: 12 TFILHGVEEDFRCDGRSRRDYRPMELETGLVSNASGSARL--RLANTDILVGVKTEIDVP 69
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P G L + S A+P+FE +D + + L+ ++ D +LC++
Sbjct: 70 NPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPFAFDYRTLCLIPG 129
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
++ W + +D+ +L GNL S+AA AAL + + P VT+T
Sbjct: 130 QQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVTAT 171
>gi|302837568|ref|XP_002950343.1| hypothetical protein VOLCADRAFT_90878 [Volvox carteri f.
nagariensis]
gi|300264348|gb|EFJ48544.1| hypothetical protein VOLCADRAFT_90878 [Volvox carteri f.
nagariensis]
Length = 311
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 64/157 (40%), Gaps = 40/157 (25%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDT-SVMINRFLEKCFK 512
++V+ V + P ++ PN+G L + E SP ASP ++ GR +T I +E
Sbjct: 52 TDVIVGVKVEVGSPSSSAPNQGRLQVTVEFSPCASPIYK-GRFGETYGEQIAAVIESSLA 110
Query: 513 ESK--------------------------------------CIDLESLCVVAEEKVWNVR 534
S +DL LC++ + W +
Sbjct: 111 PSGRAGGGGGGGVAYDGTLPTAASPHLRGAPPSSSSGTPGPGLDLSKLCILPGKTAWVLF 170
Query: 535 VDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGD 571
VD VLN DGN+LG S A LAAL H R P V + D
Sbjct: 171 VDALVLNDDGNVLGAVSAATLAALQHTRIPKVEAVRD 207
>gi|195170324|ref|XP_002025963.1| GL10119 [Drosophila persimilis]
gi|194110827|gb|EDW32870.1| GL10119 [Drosophila persimilis]
Length = 296
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTS-ISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T H +E R + D+ E T +S +G A + +++L + + +P
Sbjct: 12 TFILHGVEEDFRCDGRSRRDYRPMELETGLVSNASGSARL--RLANTDILVGIKTEIDVP 69
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P G L + S A+P+FE +D + + LE ++ D +LC++
Sbjct: 70 DPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELVLALENAYESPLAFDYRTLCLIPG 129
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
++ W + +D+ +L GNL S+AA AAL + + P VT++
Sbjct: 130 QQCWKLYIDILILECGGNLHDAVSLAAKAALHNTKLPRVTAS 171
>gi|443685755|gb|ELT89253.1| hypothetical protein CAPTEDRAFT_159382 [Capitella teleta]
Length = 287
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTSI-SAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T H ++ R T D+ E T++ S NG + + +++L V +V P
Sbjct: 12 TFILHGVQDGLRQDGRTSEDYRCVEIETNVVSNSNGSSRV--RMANTDILVGVKAEIVEP 69
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
+ +P G + + S A+P FE D + I L+ S +DLE+LC+++
Sbjct: 70 ETEQPKNGRVEFFVDCSANATPAFEGRGGEDLATEIASLLDL----SVHLDLEALCIISG 125
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT-STGDQ 572
++ W + VD+ +L GNL ++A +AL R P VT S G++
Sbjct: 126 KQCWLLYVDVLILECGGNLFDAVALAVKSALHQTRIPLVTVSVGER 171
>gi|405118209|gb|AFR92984.1| opa-interacting protein OIP2 [Cryptococcus neoformans var. grubii
H99]
Length = 272
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 426 DVDFMSSENWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSP 485
DV S N SIS +G A+ + + ++ V + P P EG + N +L
Sbjct: 71 DVWRQVSINTGSISTAHGSALVR--MGDTTMVCGVKAEIGEPDTETPGEGFIVPNIDLPA 128
Query: 486 MASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
++SP+F+ G D + + +L + SK I L SL + + W + +D+ +NYDGN
Sbjct: 129 LSSPKFKPGPPGDEAQTYSNWLNELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYDGN 188
>gi|195430734|ref|XP_002063403.1| GK21414 [Drosophila willistoni]
gi|194159488|gb|EDW74389.1| GK21414 [Drosophila willistoni]
Length = 296
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 409 TQTFHFWKESKRAQDWTDVDFMSSENWTS-ISAENGEAVWCPWVKPSEVLAQVSCNMVIP 467
T H +E+ R + D+ E T +S +G A + +++L V + +P
Sbjct: 12 TFILHGVEENYRCDGRSRKDYRPMELETGLVSNASGSARL--RLANTDILVGVKTEIDVP 69
Query: 468 KATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAE 527
P G L + S A+P+FE +D + + L+ ++ D +LC++
Sbjct: 70 DPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILALQNAYESPLSFDYRTLCLIPG 129
Query: 528 EKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTST 569
++ W + +D+ +L GNL S+AA AAL + + P VT++
Sbjct: 130 QQCWKLYIDILILECGGNLHDAVSLAAKAALYNTKLPRVTAS 171
>gi|224045546|ref|XP_002199163.1| PREDICTED: exosome complex component RRP42 [Taeniopygia guttata]
Length = 290
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+++L + M PK +P+EG L + S SP+ E + I L + F
Sbjct: 56 TDILVGIKAEMGTPKLEKPDEGYLEFFVDCSS-NSPELEGRGGEELGTDIANTLYRIFSC 114
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQ 572
+DL+SLC+ +E W + VD+ +L GN+ SIA AAL + R P V D+
Sbjct: 115 ENSVDLKSLCINPKEHCWVLYVDVLLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDE 173
>gi|168006598|ref|XP_001755996.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692926|gb|EDQ79281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 319
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 377 SLAHGVAEIEAGDMRDELDDGAYNPLWTMRGFTQTFHFWKESKRAQDWTDVDFMSSENWT 436
++ G+AE +A E++ AY L+ ++ + + H + + +S N
Sbjct: 2 TITGGIAEADAASATMEVE--AYKRLYPLQFYER--HLDSDVRPDGRPLTRARPTSVNLG 57
Query: 437 SISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQ 496
SI+ +G A+ + + +LA V ++ P PN+G + ++ ++ + SP GR
Sbjct: 58 SIATADGSALV--KIGNTTMLAGVKLEVITPSTASPNQGQVAVDFQMPSICSPLVRPGRP 115
Query: 497 TDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGN 545
+ + +++ L S ++L+ LC+V + W VD+ L+ DG+
Sbjct: 116 AEAAWVVSEQLSNALVSSNFVNLQQLCIVPGKAAWIAYVDVYCLDADGS 164
>gi|326435509|gb|EGD81079.1| hypothetical protein PTSG_11024 [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%)
Query: 473 NEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWN 532
N G + L P+ S +F G + ++ F+ F +D LC++ + W
Sbjct: 80 NVGWIVPTVTLPPLCSDRFTPGPPPAEAQRLSEFITDIFCSDTMLDKHDLCIIPGKLSWA 139
Query: 533 VRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+ +D+ +NYDGN++ C +AA+AAL P V
Sbjct: 140 LYLDIQCVNYDGNVVDACVLAAMAALQSVTLPKV 173
>gi|298711453|emb|CBJ32592.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 239
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++VLA V + P P G + + S P+F+ D + +++ LE+ +
Sbjct: 63 TDVLAAVKVEVGEPGLEAPGAGRVEVCVSCSNSLFPKFDERSSGDVNAVLSGALERSMQG 122
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVT 567
+DL++L +V + W V VD+ VL DGNLL S AA AL R P VT
Sbjct: 123 VGGLDLDALGIVDGKFCWVVFVDILVLQADGNLLDASSFAAYTALNTARIPKVT 176
>gi|72041533|ref|XP_796992.1| PREDICTED: exosome complex component RRP43-like [Strongylocentrotus
purpuratus]
Length = 275
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 434 NWTSISAENGEAVWCPWVKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFET 493
N SIS +G A+ + + V+ + P P +G L N +L P+ S QF+
Sbjct: 38 NVGSISTAHGSALV--KLGNTTVVCGIKGEFASPTVEEPKKGYLVPNVDLPPLCSAQFKP 95
Query: 494 GRQTDTSVMINRFLEKCFKESKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIA 553
G + + + ++ + S ++ E LC+ VW + D+ L+YDGN++ C IA
Sbjct: 96 GPPSIQAQVTSQLVADTLLSSNLLNYEDLCIKEGSMVWVLYCDMICLDYDGNIIDACLIA 155
Query: 554 ALAALAHFRHPDVTSTGDQIIIHSAAEKDPIPMTILHYPVTISYAVFN 601
LAAL + R P VT D + ++ +D + I++ +++VF+
Sbjct: 156 LLAALRNVRLPVVTIAEDTGLAELSSTEDR-SLNIVNQFAATTFSVFD 202
>gi|401881827|gb|EJT46109.1| hypothetical protein A1Q1_05320 [Trichosporon asahii var. asahii
CBS 2479]
gi|406701090|gb|EKD04244.1| hypothetical protein A1Q2_01463 [Trichosporon asahii var. asahii
CBS 8904]
Length = 312
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 456 VLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKESK 515
++ + + P P+EG + N +L ++SP+F+ G D + ++ +L S+
Sbjct: 75 IVCGIKAEIAEPSGAAPDEGFVVPNIDLPALSSPKFKPGPPVDEAQTMSNWLNDMLVSSR 134
Query: 516 CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQIII 575
+ +SL + + W + +D+ +NYDGN +A +AAL + R P ++ D+
Sbjct: 135 TLPPKSLIIAPGKAAWVIYIDVVCINYDGNAYDAAVLAVMAALRNTRLP--SAKYDETTF 192
Query: 576 HSAA---EKDPIPMTILHYPVTISYAVF 600
+ +K P+P+ P+ S+ VF
Sbjct: 193 QTVCNWDDKHPLPLG--RMPLCASFGVF 218
>gi|326430620|gb|EGD76190.1| hypothetical protein PTSG_00897 [Salpingoeca sp. ATCC 50818]
Length = 304
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLL-FINAELSPMASPQFETGRQTDTSVMINRFL-EKCF 511
++VL V + P RP+EG+L F + S A+ R D FL E+
Sbjct: 71 TDVLVGVKVEVATPTDDRPDEGMLEFSISSSSANATVAALDARTADKMTRSLEFLAEQLQ 130
Query: 512 KESKCIDLESLCVVAEEKVWNVRVDLNVL-NYDGNLLGCCSIAALAALAHFRHPDVT--- 567
K S +DL+ LC++ + VW VRVD+ VL + GN++ C +A AAL P+ T
Sbjct: 131 KTSHALDLKKLCILPGKAVWCVRVDVLVLQSLGGNVVECVFLAIKAALHDTTIPNCTLIK 190
Query: 568 -STGDQI---IIHSAAEKDPIPMTILHYPVTISYAVFNG 602
S G+ + I +A + PI + +PV + + +
Sbjct: 191 DSNGEAVDFDISSNAYDVSPIE-GVAEFPVILCFGIIGA 228
>gi|356559534|ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
Length = 286
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTD-TSVMINRFLEKCFK 512
++V+A V + P +P++G + I + S A P FE GR D + ++ L++C
Sbjct: 54 TDVIASVKAELGKPSLLQPDKGKVSIYVDCSSTAEPAFE-GRGGDELAAELSNALQRCLL 112
Query: 513 ESKC-----IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
K IDL SL VV + W++ +D V++ DGNLL A AAL++ P V
Sbjct: 113 GGKSGAGAGIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRV 171
>gi|388522149|gb|AFK49136.1| unknown [Lotus japonicus]
Length = 286
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
+EV+A V + P +P++G + I + S A P FE D S ++ L++
Sbjct: 54 TEVIASVKAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDDLSAELSVALQRSLLG 113
Query: 514 SKC-----IDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDV 566
+K IDL SL VV + W++ +D V++ DGNLL A AAL++ P V
Sbjct: 114 AKSGAGAGIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRV 171
>gi|313236011|emb|CBY11338.1| unnamed protein product [Oikopleura dioica]
Length = 271
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 454 SEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTDTSVMINRFLEKCFKE 513
++V+ ++ + P A P +G +N E S + SP + G + + ++ FL+ K+
Sbjct: 62 TKVICGITAETIKPAAATPKDGSFSVNFEFSSVCSPNAKAGPPNEVAQTMSIFLDGILKQ 121
Query: 514 SKCIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHPDVTSTGDQI 573
+ LC+ + W + +D+ L DGN+ ++ +++L + P++T +
Sbjct: 122 --VFETNQLCIEPDLLAWTLFIDVYCLEDDGNVTDAAMMSVISSLRDLKLPEITIDEETA 179
Query: 574 IIHSAAEKDPIPMTILHYPVTISYAVFNG 602
EK P+ + +PV+ +Y F+G
Sbjct: 180 KPVVNLEKQS-PVDLKMFPVSTTYGEFSG 207
>gi|357518287|ref|XP_003629432.1| Exosome complex exonuclease RRP42 [Medicago truncatula]
gi|355523454|gb|AET03908.1| Exosome complex exonuclease RRP42 [Medicago truncatula]
Length = 286
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 451 VKPSEVLAQVSCNMVIPKATRPNEGLLFINAELSPMASPQFETGRQTD-TSVMINRFLEK 509
+ +EV+A V + P +P++G + I + S A P FE GR D S ++ L++
Sbjct: 51 IGATEVIASVKAELGKPSLMQPDKGKVSIYIDCSSTAEPAFE-GRGADWLSADLSNALQR 109
Query: 510 CFKESK-----CIDLESLCVVAEEKVWNVRVDLNVLNYDGNLLGCCSIAALAALAHFRHP 564
C +K ID SL VV + W++ +D V++ DGNLL A AL++ P
Sbjct: 110 CLLGAKSGAGAAIDRSSLVVVEGKICWDLYIDGLVVSSDGNLLDTLGAAIKVALSNTGIP 169
Query: 565 DVTSTGDQIIIHSAAEKDP 583
V QI +++++ P
Sbjct: 170 KV-----QIAAGASSDEQP 183
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,032,524,686
Number of Sequences: 23463169
Number of extensions: 518191235
Number of successful extensions: 1372383
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 1370166
Number of HSP's gapped (non-prelim): 1535
length of query: 756
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 605
effective length of database: 8,816,256,848
effective search space: 5333835393040
effective search space used: 5333835393040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)