Query psy9090
Match_columns 488
No_of_seqs 492 out of 3191
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 18:37:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9090.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9090hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG5022 Myosin heavy chain [Cy 100.0 3.8E-85 8.3E-90 704.8 21.0 287 190-485 65-355 (1463)
2 KOG0164|consensus 100.0 3.4E-82 7.3E-87 634.3 17.3 275 190-474 7-287 (1001)
3 PTZ00014 myosin-A; Provisional 100.0 2.3E-80 4.9E-85 668.3 26.2 281 192-482 97-384 (821)
4 KOG0162|consensus 100.0 2.9E-80 6.3E-85 620.7 16.9 289 187-485 14-305 (1106)
5 cd01381 MYSc_type_VII Myosin m 100.0 8.3E-79 1.8E-83 648.9 26.3 284 193-485 2-288 (671)
6 cd01377 MYSc_type_II Myosin mo 100.0 1.1E-78 2.4E-83 651.0 27.3 284 192-485 6-301 (693)
7 cd01380 MYSc_type_V Myosin mot 100.0 1.9E-78 4.2E-83 648.9 26.7 277 193-478 2-284 (691)
8 cd01385 MYSc_type_IX Myosin mo 100.0 1.5E-77 3.2E-82 641.3 26.9 287 190-485 6-300 (692)
9 cd01383 MYSc_type_VIII Myosin 100.0 2.5E-77 5.4E-82 637.1 26.6 281 192-484 9-290 (677)
10 cd01378 MYSc_type_I Myosin mot 100.0 3.1E-77 6.8E-82 638.0 26.8 284 193-485 2-288 (674)
11 cd01384 MYSc_type_XI Myosin mo 100.0 8.2E-77 1.8E-81 632.9 26.5 279 192-480 2-286 (674)
12 cd01386 MYSc_type_XVIII Myosin 100.0 1.7E-76 3.7E-81 636.4 26.9 282 193-484 2-286 (767)
13 cd01387 MYSc_type_XV Myosin mo 100.0 2E-76 4.4E-81 631.1 26.8 284 192-485 2-289 (677)
14 cd01382 MYSc_type_VI Myosin mo 100.0 4.9E-76 1.1E-80 631.8 26.5 287 191-479 4-312 (717)
15 cd01379 MYSc_type_III Myosin m 100.0 9E-76 2E-80 622.9 27.0 289 193-485 2-295 (653)
16 cd00124 MYSc Myosin motor doma 100.0 5.1E-75 1.1E-79 625.8 27.3 284 193-485 2-289 (679)
17 smart00242 MYSc Myosin. Large 100.0 9.1E-75 2E-79 622.0 27.0 285 192-485 7-296 (677)
18 KOG0163|consensus 100.0 2E-75 4.4E-80 586.8 14.4 289 191-481 57-368 (1259)
19 PF00063 Myosin_head: Myosin h 100.0 6.3E-72 1.4E-76 608.6 22.0 284 193-485 1-290 (689)
20 KOG0161|consensus 100.0 5.7E-72 1.2E-76 630.1 18.9 284 192-485 83-375 (1930)
21 KOG0160|consensus 100.0 5.6E-65 1.2E-69 537.1 16.3 281 191-482 8-291 (862)
22 KOG4229|consensus 100.0 2.8E-55 6E-60 474.7 9.8 288 189-485 59-352 (1062)
23 KOG0598|consensus 100.0 1.2E-39 2.6E-44 311.7 13.3 181 1-188 122-306 (357)
24 KOG0616|consensus 100.0 1.1E-37 2.4E-42 288.9 12.3 174 1-185 141-319 (355)
25 KOG0581|consensus 100.0 3.4E-37 7.4E-42 295.0 13.2 167 1-175 175-347 (364)
26 KOG0615|consensus 100.0 5.1E-38 1.1E-42 302.8 7.4 168 1-171 273-445 (475)
27 KOG0575|consensus 100.0 5.2E-37 1.1E-41 309.5 13.9 159 1-167 115-273 (592)
28 KOG0592|consensus 100.0 1.6E-36 3.5E-41 301.4 15.2 171 1-179 171-354 (604)
29 KOG0694|consensus 100.0 9.6E-37 2.1E-41 311.0 13.0 182 1-190 465-651 (694)
30 KOG0033|consensus 100.0 1.9E-35 4.1E-40 267.1 13.8 162 1-168 107-272 (355)
31 KOG0578|consensus 100.0 2.4E-35 5.2E-40 295.3 14.6 163 1-168 366-528 (550)
32 KOG0605|consensus 100.0 6.8E-35 1.5E-39 290.0 14.2 172 1-178 238-460 (550)
33 KOG0599|consensus 100.0 6.9E-35 1.5E-39 267.2 10.7 168 1-169 120-289 (411)
34 KOG0593|consensus 100.0 1.7E-34 3.8E-39 268.3 11.8 166 1-170 98-291 (396)
35 KOG0588|consensus 100.0 4.9E-34 1.1E-38 289.2 13.6 163 1-172 109-272 (786)
36 KOG0583|consensus 100.0 1.2E-33 2.7E-38 284.6 15.6 160 1-168 117-280 (370)
37 KOG0690|consensus 100.0 5.8E-34 1.3E-38 266.7 10.1 179 1-187 265-448 (516)
38 KOG0579|consensus 100.0 2.3E-33 5.1E-38 281.6 13.9 172 1-172 127-298 (1187)
39 KOG0661|consensus 100.0 3.3E-33 7.1E-38 273.9 14.2 165 1-170 107-298 (538)
40 KOG0198|consensus 100.0 2.1E-33 4.5E-38 272.8 11.9 166 1-171 114-284 (313)
41 KOG0582|consensus 100.0 3.3E-33 7.2E-38 271.9 13.1 170 1-173 123-303 (516)
42 KOG0659|consensus 100.0 1.7E-32 3.6E-37 251.1 14.4 168 1-172 98-290 (318)
43 KOG0604|consensus 100.0 7.3E-33 1.6E-37 257.0 10.0 164 1-170 158-329 (400)
44 cd05571 STKc_PKB Catalytic dom 100.0 2.6E-32 5.5E-37 273.0 14.1 172 1-180 92-268 (323)
45 KOG0594|consensus 100.0 5.1E-32 1.1E-36 259.1 14.3 167 2-172 118-311 (323)
46 KOG0663|consensus 100.0 4E-32 8.6E-37 255.7 13.2 166 1-170 174-368 (419)
47 KOG0660|consensus 100.0 3.1E-32 6.6E-37 260.0 12.6 167 1-171 122-318 (359)
48 KOG0696|consensus 100.0 3.7E-32 8.1E-37 261.5 12.9 179 1-187 447-630 (683)
49 KOG0201|consensus 100.0 4.7E-33 1E-37 270.7 6.2 162 1-169 108-269 (467)
50 KOG0591|consensus 100.0 3.6E-32 7.7E-37 250.5 11.5 151 1-157 121-275 (375)
51 KOG0600|consensus 100.0 8.8E-32 1.9E-36 265.7 14.5 165 1-169 215-406 (560)
52 KOG0610|consensus 100.0 1.4E-31 3E-36 258.7 15.4 167 1-173 176-402 (459)
53 cd05590 STKc_nPKC_eta Catalyti 100.0 1.3E-31 2.9E-36 267.5 14.9 175 1-183 93-273 (320)
54 KOG0597|consensus 100.0 4.9E-32 1.1E-36 269.8 11.6 160 1-168 97-256 (808)
55 KOG0986|consensus 100.0 7.3E-32 1.6E-36 262.6 12.1 178 1-186 284-469 (591)
56 cd05631 STKc_GRK4 Catalytic do 100.0 1.5E-31 3.2E-36 262.6 13.0 177 1-185 99-283 (285)
57 cd05585 STKc_YPK1_like Catalyt 100.0 2.4E-31 5.2E-36 264.6 14.6 166 1-174 90-258 (312)
58 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-31 4.5E-36 265.6 14.2 170 1-178 93-263 (316)
59 KOG0658|consensus 100.0 1.3E-31 2.8E-36 256.1 11.9 169 1-174 122-317 (364)
60 cd05591 STKc_nPKC_epsilon Cata 100.0 2.4E-31 5.2E-36 265.7 14.4 169 1-177 93-268 (321)
61 cd05593 STKc_PKB_gamma Catalyt 100.0 2.3E-31 4.9E-36 266.7 14.0 169 1-177 92-265 (328)
62 cd05587 STKc_cPKC Catalytic do 100.0 2.5E-31 5.5E-36 265.9 14.1 171 1-179 98-273 (324)
63 KOG0585|consensus 100.0 2.1E-31 4.6E-36 260.9 13.0 167 1-169 207-378 (576)
64 cd05620 STKc_nPKC_delta Cataly 100.0 2.7E-31 5.8E-36 264.8 13.9 169 1-177 93-262 (316)
65 cd05616 STKc_cPKC_beta Catalyt 100.0 3E-31 6.4E-36 265.3 14.2 177 1-185 98-279 (323)
66 cd05612 STKc_PRKX_like Catalyt 100.0 4E-31 8.8E-36 260.3 14.7 165 1-176 98-267 (291)
67 cd05575 STKc_SGK Catalytic dom 100.0 3.7E-31 8E-36 264.6 13.9 172 1-180 93-268 (323)
68 KOG0614|consensus 100.0 2E-31 4.3E-36 262.4 11.1 180 1-187 517-701 (732)
69 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.4E-31 9.5E-36 261.5 13.7 167 1-171 100-296 (303)
70 PTZ00426 cAMP-dependent protei 100.0 4.8E-31 1E-35 265.6 13.9 168 1-179 128-300 (340)
71 cd05595 STKc_PKB_beta Catalyti 100.0 4.9E-31 1.1E-35 263.7 13.5 167 1-175 92-263 (323)
72 KOG0695|consensus 100.0 3.9E-31 8.5E-36 248.6 11.7 183 1-190 348-543 (593)
73 cd05617 STKc_aPKC_zeta Catalyt 100.0 5E-31 1.1E-35 264.1 13.1 178 1-185 93-282 (327)
74 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.6E-31 1.9E-35 257.6 14.4 162 1-166 100-288 (288)
75 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-30 2.4E-35 261.2 15.0 167 1-175 98-269 (324)
76 PTZ00263 protein kinase A cata 100.0 8.9E-31 1.9E-35 262.5 14.2 163 1-174 115-282 (329)
77 cd05608 STKc_GRK1 Catalytic do 100.0 1E-30 2.3E-35 255.9 14.2 172 1-177 94-271 (280)
78 cd07862 STKc_CDK6 Catalytic do 100.0 1.2E-30 2.6E-35 256.4 14.7 160 1-166 107-290 (290)
79 cd05570 STKc_PKC Catalytic dom 100.0 8.7E-31 1.9E-35 261.3 13.9 171 1-179 93-268 (318)
80 cd05584 STKc_p70S6K Catalytic 100.0 1.4E-30 3E-35 260.4 15.1 167 1-175 97-268 (323)
81 cd05594 STKc_PKB_alpha Catalyt 100.0 5.9E-31 1.3E-35 263.3 12.3 167 1-175 92-264 (325)
82 KOG4717|consensus 100.0 1.6E-30 3.6E-35 256.1 15.1 163 1-172 115-279 (864)
83 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-30 2.4E-35 260.4 14.2 170 1-178 93-263 (316)
84 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-30 2.3E-35 261.9 13.9 169 1-176 93-275 (329)
85 PTZ00036 glycogen synthase kin 100.0 1.1E-30 2.4E-35 271.7 14.5 167 1-172 167-360 (440)
86 KOG0612|consensus 100.0 7.2E-31 1.6E-35 279.4 13.1 176 1-177 172-352 (1317)
87 cd05586 STKc_Sck1_like Catalyt 100.0 5.2E-31 1.1E-35 264.2 11.5 171 1-177 93-267 (330)
88 cd05618 STKc_aPKC_iota Catalyt 100.0 1.4E-30 3E-35 261.1 14.1 176 1-183 93-282 (329)
89 cd05615 STKc_cPKC_alpha Cataly 100.0 2.2E-30 4.7E-35 259.0 15.3 176 1-184 98-278 (323)
90 KOG0032|consensus 100.0 3E-30 6.6E-35 260.0 16.0 164 1-170 132-300 (382)
91 cd05602 STKc_SGK1 Catalytic do 100.0 1.5E-30 3.2E-35 260.5 13.5 170 1-178 93-266 (325)
92 cd05628 STKc_NDR1 Catalytic do 100.0 3E-30 6.6E-35 262.2 15.5 170 1-176 98-306 (363)
93 KOG0983|consensus 100.0 3.5E-30 7.7E-35 236.4 14.0 168 1-171 188-357 (391)
94 cd05604 STKc_SGK3 Catalytic do 100.0 1.4E-30 3.1E-35 260.6 12.4 169 1-177 93-265 (325)
95 cd05614 STKc_MSK2_N N-terminal 100.0 3.1E-30 6.8E-35 258.8 14.7 174 1-180 102-284 (332)
96 cd05596 STKc_ROCK Catalytic do 100.0 3.2E-30 7E-35 262.6 14.9 173 1-174 139-315 (370)
97 KOG0595|consensus 100.0 2.7E-30 5.8E-35 249.7 13.0 164 1-170 106-275 (429)
98 cd05603 STKc_SGK2 Catalytic do 100.0 4.1E-30 8.9E-35 256.8 13.7 168 1-176 93-264 (321)
99 cd07863 STKc_CDK4 Catalytic do 100.0 6.5E-30 1.4E-34 250.8 14.8 160 1-166 105-288 (288)
100 cd05582 STKc_RSK_N N-terminal 100.0 2E-30 4.3E-35 258.7 11.2 167 1-175 95-266 (318)
101 cd05573 STKc_ROCK_NDR_like Cat 100.0 5E-30 1.1E-34 259.0 14.1 169 1-175 98-297 (350)
102 cd07848 STKc_CDKL5 Catalytic d 100.0 9.1E-30 2E-34 249.7 15.4 161 1-166 97-287 (287)
103 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9E-30 1.9E-34 255.7 14.6 168 1-171 100-298 (338)
104 KOG0574|consensus 100.0 3E-31 6.4E-36 246.2 3.1 167 1-172 126-292 (502)
105 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.6E-30 2.1E-34 255.4 14.3 167 1-175 98-269 (333)
106 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-29 2.4E-34 252.1 14.5 167 1-171 101-294 (309)
107 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-29 3.1E-34 257.8 15.4 173 1-174 139-315 (370)
108 KOG0580|consensus 100.0 4.1E-30 8.9E-35 232.2 9.9 158 1-168 121-278 (281)
109 KOG0603|consensus 100.0 7.5E-30 1.6E-34 259.3 13.0 153 4-168 415-568 (612)
110 cd05601 STKc_CRIK Catalytic do 100.0 6E-30 1.3E-34 256.5 12.3 174 1-175 99-275 (330)
111 cd05627 STKc_NDR2 Catalytic do 100.0 6.7E-30 1.5E-34 259.4 12.7 170 1-176 98-306 (360)
112 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-29 2.6E-34 257.8 14.4 168 1-174 98-307 (364)
113 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-29 3.3E-34 256.7 15.1 162 1-168 120-320 (359)
114 cd07874 STKc_JNK3 Catalytic do 100.0 1.9E-29 4.1E-34 255.5 15.3 163 1-169 116-317 (355)
115 cd07868 STKc_CDK8 Catalytic do 100.0 2.2E-29 4.8E-34 250.8 15.3 162 1-166 105-317 (317)
116 cd06643 STKc_SLK Catalytic dom 100.0 4E-29 8.6E-34 244.6 16.8 169 1-169 100-268 (282)
117 cd05625 STKc_LATS1 Catalytic d 100.0 1.7E-29 3.6E-34 258.6 14.6 167 1-173 98-315 (382)
118 cd07875 STKc_JNK1 Catalytic do 100.0 3.7E-29 8E-34 254.3 17.0 162 1-168 123-323 (364)
119 cd06608 STKc_myosinIII_like Ca 100.0 2.1E-29 4.5E-34 244.7 14.4 166 1-166 110-275 (275)
120 cd06644 STKc_STK10_LOK Catalyt 100.0 4.5E-29 9.7E-34 245.6 16.9 173 1-173 107-279 (292)
121 PTZ00284 protein kinase; Provi 100.0 1.3E-29 2.8E-34 266.1 13.6 163 1-171 228-446 (467)
122 KOG0589|consensus 100.0 9.1E-30 2E-34 253.7 11.4 161 1-168 103-263 (426)
123 cd05605 STKc_GRK4_like Catalyt 100.0 2.3E-29 5E-34 247.0 13.9 175 1-183 99-281 (285)
124 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.3E-29 7.2E-34 252.5 15.2 164 1-171 115-306 (343)
125 cd05607 STKc_GRK7 Catalytic do 100.0 2.7E-29 5.9E-34 245.5 13.9 168 1-176 92-267 (277)
126 cd05622 STKc_ROCK1 Catalytic d 100.0 3.9E-29 8.6E-34 254.7 15.5 172 1-173 139-314 (371)
127 cd05626 STKc_LATS2 Catalytic d 100.0 3.6E-29 7.7E-34 256.0 15.3 168 1-173 98-315 (381)
128 PHA03212 serine/threonine kina 100.0 4.3E-29 9.4E-34 255.8 15.9 166 1-171 179-384 (391)
129 cd06637 STKc_TNIK Catalytic do 100.0 5.2E-29 1.1E-33 242.2 15.5 165 1-166 108-272 (272)
130 KOG0596|consensus 100.0 2.5E-29 5.4E-34 250.3 13.1 164 5-169 461-633 (677)
131 cd06611 STKc_SLK_like Catalyti 100.0 5.5E-29 1.2E-33 243.3 15.4 170 1-170 100-269 (280)
132 KOG0611|consensus 100.0 2.2E-29 4.7E-34 242.0 12.0 157 1-167 150-307 (668)
133 cd06639 STKc_myosinIIIB Cataly 100.0 9.6E-29 2.1E-33 243.1 16.1 167 1-167 125-291 (291)
134 cd05629 STKc_NDR_like_fungal C 100.0 3.7E-29 8.1E-34 255.5 13.6 168 1-174 98-316 (377)
135 PLN00034 mitogen-activated pro 100.0 9.3E-29 2E-33 250.3 16.4 166 2-169 166-334 (353)
136 PTZ00283 serine/threonine prot 100.0 5.1E-29 1.1E-33 262.6 14.8 162 1-169 140-303 (496)
137 PHA03207 serine/threonine kina 100.0 3.7E-29 8.1E-34 256.8 13.4 170 1-175 182-387 (392)
138 cd08223 STKc_Nek4 Catalytic do 100.0 1.8E-28 3.8E-33 236.2 16.7 159 1-166 99-257 (257)
139 cd05623 STKc_MRCK_alpha Cataly 100.0 7.7E-29 1.7E-33 248.8 14.5 175 1-175 99-278 (332)
140 cd05598 STKc_LATS Catalytic do 100.0 4.6E-29 1E-33 254.7 12.9 168 1-174 98-312 (376)
141 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.1E-28 2.5E-33 241.3 15.0 165 1-166 118-282 (282)
142 KOG0577|consensus 100.0 4.4E-29 9.4E-34 249.6 11.6 165 1-172 123-287 (948)
143 cd05633 STKc_GRK3 Catalytic do 100.0 9.7E-29 2.1E-33 241.9 14.0 167 1-175 94-267 (279)
144 cd06649 PKc_MEK2 Catalytic dom 100.0 1.8E-28 3.8E-33 246.1 16.1 162 1-171 100-309 (331)
145 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-28 3.1E-33 250.8 15.7 166 1-170 100-295 (372)
146 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.5E-28 3.3E-33 243.0 15.0 167 1-171 101-294 (301)
147 cd05630 STKc_GRK6 Catalytic do 100.0 7.8E-29 1.7E-33 243.3 12.6 166 1-174 99-272 (285)
148 cd05597 STKc_DMPK_like Catalyt 100.0 2E-28 4.3E-33 245.7 15.7 174 1-174 99-277 (331)
149 cd06612 STKc_MST1_2 Catalytic 100.0 2E-28 4.3E-33 235.6 15.1 161 1-166 96-256 (256)
150 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-28 3.6E-33 240.3 14.5 162 1-166 98-285 (285)
151 cd06638 STKc_myosinIIIA Cataly 100.0 2E-28 4.4E-33 239.9 15.1 166 1-166 121-286 (286)
152 KOG0192|consensus 100.0 2.2E-28 4.8E-33 244.5 15.6 157 1-162 139-298 (362)
153 cd06655 STKc_PAK2 Catalytic do 100.0 2.3E-28 5E-33 241.3 15.3 165 1-170 112-276 (296)
154 PHA03209 serine/threonine kina 100.0 1.2E-28 2.6E-33 249.9 13.3 163 1-169 154-357 (357)
155 cd07867 STKc_CDC2L6 Catalytic 100.0 1.7E-28 3.7E-33 244.2 14.1 162 1-166 105-317 (317)
156 cd06654 STKc_PAK1 Catalytic do 100.0 2.4E-28 5.2E-33 241.2 15.1 164 1-169 113-276 (296)
157 KOG4279|consensus 100.0 3.4E-29 7.4E-34 254.1 8.8 164 2-169 673-838 (1226)
158 KOG0667|consensus 100.0 1.7E-28 3.7E-33 250.5 13.9 162 1-170 286-509 (586)
159 cd05606 STKc_beta_ARK Catalyti 100.0 2.7E-28 5.8E-33 238.6 14.7 169 1-177 94-269 (278)
160 PTZ00267 NIMA-related protein 100.0 2.2E-28 4.8E-33 257.2 15.0 162 1-169 166-329 (478)
161 cd06648 STKc_PAK_II Catalytic 100.0 5E-28 1.1E-32 237.5 16.1 166 1-171 112-277 (285)
162 cd06658 STKc_PAK5 Catalytic do 100.0 3E-28 6.6E-33 240.0 14.5 165 1-170 115-279 (292)
163 cd05632 STKc_GRK5 Catalytic do 100.0 3.1E-28 6.8E-33 239.0 14.2 172 1-178 99-276 (285)
164 cd06625 STKc_MEKK3_like Cataly 100.0 6.6E-28 1.4E-32 233.0 15.6 160 1-166 101-263 (263)
165 cd07839 STKc_CDK5 Catalytic do 100.0 3.5E-28 7.6E-33 238.0 13.8 162 1-166 96-284 (284)
166 cd06656 STKc_PAK3 Catalytic do 100.0 2.9E-28 6.2E-33 240.7 13.1 166 1-171 112-277 (297)
167 cd06609 STKc_MST3_like Catalyt 100.0 6.1E-28 1.3E-32 235.1 15.2 165 1-171 95-259 (274)
168 cd08529 STKc_FA2-like Catalyti 100.0 1.1E-27 2.3E-32 230.5 16.3 159 1-166 98-256 (256)
169 cd06619 PKc_MKK5 Catalytic dom 100.0 6.9E-28 1.5E-32 235.7 15.0 164 1-171 92-261 (279)
170 cd06659 STKc_PAK6 Catalytic do 100.0 7.7E-28 1.7E-32 237.7 15.2 164 1-169 114-277 (297)
171 cd05580 STKc_PKA Catalytic dom 100.0 1E-27 2.2E-32 235.8 15.2 168 1-179 98-270 (290)
172 cd07837 STKc_CdkB_plant Cataly 100.0 1.2E-27 2.6E-32 235.5 15.7 163 1-167 107-295 (295)
173 cd07845 STKc_CDK10 Catalytic d 100.0 8.8E-28 1.9E-32 238.4 14.8 166 1-170 105-297 (309)
174 cd05574 STKc_phototropin_like 100.0 1.3E-27 2.9E-32 237.9 15.9 170 1-176 100-302 (316)
175 cd06645 STKc_MAP4K3 Catalytic 100.0 9.8E-28 2.1E-32 232.6 14.6 163 1-165 103-267 (267)
176 cd05572 STKc_cGK_PKG Catalytic 100.0 1.3E-27 2.8E-32 231.1 15.4 165 1-172 90-261 (262)
177 cd06613 STKc_MAP4K3_like Catal 100.0 9.8E-28 2.1E-32 231.6 14.4 163 1-165 98-262 (262)
178 cd05624 STKc_MRCK_beta Catalyt 100.0 7.5E-28 1.6E-32 241.5 14.1 174 1-174 99-277 (331)
179 PHA03211 serine/threonine kina 100.0 7.6E-28 1.7E-32 250.3 14.6 163 1-168 257-460 (461)
180 cd06616 PKc_MKK4 Catalytic dom 100.0 8E-28 1.7E-32 236.0 13.9 169 1-172 104-276 (288)
181 cd06610 STKc_OSR1_SPAK Catalyt 99.9 1.2E-27 2.5E-32 231.6 14.5 162 1-166 99-267 (267)
182 PF00069 Pkinase: Protein kina 99.9 2.1E-28 4.5E-33 235.8 9.1 161 1-166 95-260 (260)
183 KOG0587|consensus 99.9 2.6E-28 5.6E-33 254.6 10.1 168 1-168 120-287 (953)
184 cd05611 STKc_Rim15_like Cataly 99.9 1.4E-27 3.1E-32 230.6 14.6 163 1-172 94-260 (260)
185 cd05102 PTKc_VEGFR3 Catalytic 99.9 1.9E-27 4.1E-32 239.1 15.5 156 1-162 171-329 (338)
186 cd05577 STKc_GRK Catalytic dom 99.9 1.4E-27 2.9E-32 233.3 14.0 173 1-179 92-270 (277)
187 cd07847 STKc_CDKL1_4 Catalytic 99.9 2.3E-27 5.1E-32 232.1 15.6 162 1-166 97-286 (286)
188 cd06628 STKc_MAPKKK_Byr2_like 99.9 2.2E-27 4.7E-32 230.1 15.2 159 1-166 103-267 (267)
189 KOG0608|consensus 99.9 3.3E-28 7.2E-33 244.9 9.7 169 1-175 726-940 (1034)
190 cd07860 STKc_CDK2_3 Catalytic 99.9 1.8E-27 4E-32 232.9 14.8 162 1-166 97-284 (284)
191 KOG0607|consensus 99.9 1.4E-27 3.1E-32 223.6 12.4 172 1-172 173-370 (463)
192 PHA03210 serine/threonine kina 99.9 1.1E-27 2.4E-32 253.1 13.1 165 3-172 266-463 (501)
193 PHA03390 pk1 serine/threonine- 99.9 2.6E-27 5.7E-32 230.2 14.7 159 1-168 106-267 (267)
194 cd06650 PKc_MEK1 Catalytic dom 99.9 2.6E-27 5.7E-32 237.8 15.0 162 1-170 100-306 (333)
195 cd07831 STKc_MOK Catalytic dom 99.9 3.5E-27 7.5E-32 230.4 15.4 160 1-166 97-282 (282)
196 cd05579 STKc_MAST_like Catalyt 99.9 3.7E-27 8E-32 227.4 15.3 165 1-171 90-265 (265)
197 cd07849 STKc_ERK1_2_like Catal 99.9 3.6E-27 7.7E-32 237.1 15.6 167 1-171 103-300 (336)
198 cd06617 PKc_MKK3_6 Catalytic d 99.9 2.3E-27 5E-32 232.0 13.7 169 1-172 100-270 (283)
199 cd06631 STKc_YSK4 Catalytic do 99.9 3.9E-27 8.5E-32 228.2 15.1 161 1-166 99-265 (265)
200 cd07850 STKc_JNK Catalytic dom 99.9 2.9E-27 6.3E-32 239.4 14.8 162 1-168 115-316 (353)
201 cd07843 STKc_CDC2L1 Catalytic 99.9 2.7E-27 6E-32 232.9 14.1 162 1-166 103-293 (293)
202 cd08218 STKc_Nek1 Catalytic do 99.9 3.7E-27 8E-32 227.0 14.7 159 1-166 98-256 (256)
203 KOG0671|consensus 99.9 6.1E-28 1.3E-32 231.4 8.9 162 1-171 189-414 (415)
204 cd08227 PK_STRAD_alpha Pseudok 99.9 3.8E-27 8.2E-32 236.0 14.7 167 1-170 98-314 (327)
205 cd07841 STKc_CDK7 Catalytic do 99.9 5.4E-27 1.2E-31 231.3 15.6 167 1-171 99-290 (298)
206 cd06651 STKc_MEKK3 Catalytic d 99.9 4.6E-27 1E-31 228.0 14.5 160 1-167 103-265 (266)
207 cd07835 STKc_CDK1_like Catalyt 99.9 5E-27 1.1E-31 229.7 14.6 162 1-166 96-283 (283)
208 cd06917 STKc_NAK1_like Catalyt 99.9 4.9E-27 1.1E-31 229.0 14.5 166 1-171 98-263 (277)
209 cd05609 STKc_MAST Catalytic do 99.9 7.8E-27 1.7E-31 231.3 15.9 168 1-173 98-283 (305)
210 cd08217 STKc_Nek2 Catalytic do 99.9 7E-27 1.5E-31 225.5 15.1 159 1-166 102-265 (265)
211 cd06646 STKc_MAP4K5 Catalytic 99.9 3.7E-27 8.1E-32 228.6 13.2 163 1-165 103-267 (267)
212 cd06605 PKc_MAPKK Catalytic do 99.9 3.4E-27 7.4E-32 228.3 12.8 161 1-169 97-263 (265)
213 cd07834 STKc_MAPK Catalytic do 99.9 4.6E-27 1E-31 235.4 14.2 168 1-172 100-298 (330)
214 cd06614 STKc_PAK Catalytic dom 99.9 6.2E-27 1.3E-31 229.6 14.7 166 1-171 113-278 (286)
215 PLN00009 cyclin-dependent kina 99.9 6.5E-27 1.4E-31 230.4 14.9 166 2-171 100-292 (294)
216 cd07832 STKc_CCRK Catalytic do 99.9 6.8E-27 1.5E-31 228.8 14.9 163 1-167 96-286 (286)
217 cd06657 STKc_PAK4 Catalytic do 99.9 6.8E-27 1.5E-31 230.4 14.8 165 1-170 113-277 (292)
218 cd05122 PKc_STE Catalytic doma 99.9 9.1E-27 2E-31 222.6 15.2 159 1-165 95-253 (253)
219 cd07858 STKc_TEY_MAPK_plant Ca 99.9 7.1E-27 1.5E-31 235.0 15.2 167 1-171 105-299 (337)
220 PHA02882 putative serine/threo 99.9 5.9E-27 1.3E-31 231.0 14.3 156 2-162 124-291 (294)
221 cd07870 STKc_PFTAIRE2 Catalyti 99.9 8.6E-27 1.9E-31 229.2 15.2 162 1-166 100-291 (291)
222 cd06647 STKc_PAK_I Catalytic d 99.9 4.2E-27 9.1E-32 232.0 12.8 165 1-170 112-276 (293)
223 cd05048 PTKc_Ror Catalytic Dom 99.9 8.2E-27 1.8E-31 228.1 14.7 156 1-163 121-279 (283)
224 cd07879 STKc_p38delta_MAPK13 C 99.9 6.5E-27 1.4E-31 235.8 14.2 164 1-171 114-305 (342)
225 cd06624 STKc_ASK Catalytic dom 99.9 9.6E-27 2.1E-31 225.9 14.9 160 2-166 106-268 (268)
226 KOG0665|consensus 99.9 4E-27 8.6E-32 221.1 11.6 160 2-167 116-314 (369)
227 cd08216 PK_STRAD Pseudokinase 99.9 1.3E-26 2.7E-31 230.5 15.7 167 1-170 98-302 (314)
228 cd08221 STKc_Nek9 Catalytic do 99.9 1.5E-26 3.3E-31 222.8 15.8 159 1-166 98-256 (256)
229 cd06607 STKc_TAO Catalytic dom 99.9 1.7E-26 3.6E-31 229.1 16.5 161 1-168 112-272 (307)
230 cd06642 STKc_STK25-YSK1 Cataly 99.9 4.8E-27 1E-31 229.3 12.3 163 1-170 98-260 (277)
231 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 1.6E-26 3.5E-31 226.5 15.9 167 1-171 99-270 (286)
232 cd07844 STKc_PCTAIRE_like Cata 99.9 1.1E-26 2.4E-31 228.3 14.6 162 1-166 100-291 (291)
233 cd06623 PKc_MAPKK_plant_like C 99.9 9.6E-27 2.1E-31 224.8 14.0 163 1-170 96-263 (264)
234 KOG0584|consensus 99.9 2.8E-27 6.1E-32 239.7 10.5 160 1-169 140-302 (632)
235 cd07866 STKc_BUR1 Catalytic do 99.9 1.1E-26 2.5E-31 230.1 14.7 162 1-166 112-311 (311)
236 cd06618 PKc_MKK7 Catalytic dom 99.9 1.4E-26 3.1E-31 228.4 14.9 168 1-170 111-280 (296)
237 cd08220 STKc_Nek8 Catalytic do 99.9 1.8E-26 3.8E-31 222.0 15.2 158 1-166 98-256 (256)
238 cd07846 STKc_CDKL2_3 Catalytic 99.9 1.5E-26 3.2E-31 226.5 14.7 162 1-166 97-286 (286)
239 KOG0662|consensus 99.9 9.2E-27 2E-31 201.8 11.5 165 1-169 98-289 (292)
240 cd07865 STKc_CDK9 Catalytic do 99.9 1.4E-26 3.1E-31 229.2 14.6 162 1-166 116-310 (310)
241 cd08215 STKc_Nek Catalytic dom 99.9 1.9E-26 4.2E-31 221.3 14.9 159 1-166 100-258 (258)
242 cd06640 STKc_MST4 Catalytic do 99.9 1E-26 2.2E-31 227.1 13.1 164 1-171 98-261 (277)
243 cd05118 STKc_CMGC Catalytic do 99.9 1.6E-26 3.5E-31 225.7 14.3 162 1-166 95-283 (283)
244 cd07855 STKc_ERK5 Catalytic do 99.9 1.6E-26 3.5E-31 232.1 14.6 168 1-172 104-303 (334)
245 cd07838 STKc_CDK4_6_like Catal 99.9 2.1E-26 4.5E-31 225.4 15.0 160 1-166 104-287 (287)
246 cd07851 STKc_p38 Catalytic dom 99.9 1.6E-26 3.5E-31 233.0 14.5 163 1-170 115-305 (343)
247 KOG4721|consensus 99.9 2E-27 4.2E-32 236.9 7.6 156 2-164 210-365 (904)
248 PTZ00266 NIMA-related protein 99.9 1.2E-26 2.7E-31 253.7 14.5 164 1-170 115-302 (1021)
249 cd06626 STKc_MEKK4 Catalytic d 99.9 3.2E-26 7E-31 221.2 15.9 164 1-166 96-264 (264)
250 cd07842 STKc_CDK8_like Catalyt 99.9 1.2E-26 2.5E-31 230.6 13.1 162 1-166 105-316 (316)
251 cd07836 STKc_Pho85 Catalytic d 99.9 1.7E-26 3.8E-31 225.8 14.1 162 1-166 97-284 (284)
252 cd07854 STKc_MAPK4_6 Catalytic 99.9 2.9E-26 6.3E-31 231.1 16.0 165 1-169 111-306 (342)
253 KOG4645|consensus 99.9 2.5E-27 5.4E-32 255.6 8.4 166 2-171 1332-1502(1509)
254 cd07833 STKc_CDKL Catalytic do 99.9 2.9E-26 6.2E-31 224.6 15.2 162 1-166 97-288 (288)
255 cd07857 STKc_MPK1 Catalytic do 99.9 2.4E-26 5.1E-31 230.7 14.7 166 1-170 102-299 (332)
256 KOG0666|consensus 99.9 1.3E-26 2.8E-31 216.5 11.7 166 1-170 129-344 (438)
257 cd08225 STKc_Nek5 Catalytic do 99.9 3.1E-26 6.7E-31 220.4 14.9 159 1-166 98-257 (257)
258 cd08219 STKc_Nek3 Catalytic do 99.9 2.3E-26 5E-31 221.5 14.0 156 1-163 97-252 (255)
259 PTZ00024 cyclin-dependent prot 99.9 2.7E-26 5.9E-31 230.5 15.0 166 1-170 116-320 (335)
260 cd05061 PTKc_InsR Catalytic do 99.9 4.5E-26 9.7E-31 223.9 16.2 163 2-171 117-288 (288)
261 cd06652 STKc_MEKK2 Catalytic d 99.9 3.5E-26 7.6E-31 221.6 15.0 160 1-167 103-265 (265)
262 cd06633 STKc_TAO3 Catalytic do 99.9 5.8E-26 1.2E-30 226.0 16.9 163 1-170 118-280 (313)
263 cd06615 PKc_MEK Catalytic doma 99.9 3.3E-26 7.2E-31 227.2 15.2 161 1-169 96-293 (308)
264 cd05578 STKc_Yank1 Catalytic d 99.9 2.4E-26 5.2E-31 221.7 13.7 158 1-166 97-258 (258)
265 smart00750 KIND kinase non-cat 99.9 1.1E-26 2.3E-31 211.2 10.6 149 1-167 14-169 (176)
266 cd06627 STKc_Cdc7_like Catalyt 99.9 4.3E-26 9.3E-31 218.7 15.3 159 1-166 96-254 (254)
267 cd05091 PTKc_Ror2 Catalytic do 99.9 4.2E-26 9.1E-31 223.2 15.3 156 1-163 121-279 (283)
268 cd05093 PTKc_TrkB Catalytic do 99.9 4.9E-26 1.1E-30 223.6 15.6 155 1-162 117-274 (288)
269 cd05075 PTKc_Axl Catalytic dom 99.9 4.5E-26 9.7E-31 221.5 15.2 156 1-163 109-267 (272)
270 PHA02988 hypothetical protein; 99.9 3.8E-26 8.3E-31 224.1 14.7 155 1-162 119-274 (283)
271 cd05106 PTKc_CSF-1R Catalytic 99.9 3.6E-26 7.8E-31 233.2 15.0 156 1-162 209-367 (374)
272 cd00192 PTKc Catalytic domain 99.9 5.6E-26 1.2E-30 218.7 15.5 156 1-163 102-260 (262)
273 cd08222 STKc_Nek11 Catalytic d 99.9 5.6E-26 1.2E-30 219.4 15.5 158 1-166 103-260 (260)
274 KOG0669|consensus 99.9 3.1E-26 6.8E-31 208.3 12.7 166 1-170 121-322 (376)
275 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 5.5E-26 1.2E-30 223.1 15.5 163 1-170 102-273 (287)
276 cd05054 PTKc_VEGFR Catalytic d 99.9 4.5E-26 9.8E-31 229.2 15.1 157 1-163 170-329 (337)
277 cd05116 PTKc_Syk Catalytic dom 99.9 6.8E-26 1.5E-30 218.7 15.7 155 1-162 92-250 (257)
278 cd06632 STKc_MEKK1_plant Catal 99.9 6.6E-26 1.4E-30 218.1 15.3 160 1-166 99-258 (258)
279 cd05123 STKc_AGC Catalytic dom 99.9 8.6E-26 1.9E-30 216.4 16.0 158 1-166 90-250 (250)
280 cd05089 PTKc_Tie1 Catalytic do 99.9 6.6E-26 1.4E-30 223.8 15.5 155 1-163 116-271 (297)
281 cd05576 STKc_RPK118_like Catal 99.9 2.6E-26 5.7E-31 219.1 12.2 151 1-166 82-237 (237)
282 cd07829 STKc_CDK_like Catalyti 99.9 1E-25 2.2E-30 219.9 16.6 162 1-166 95-282 (282)
283 cd05049 PTKc_Trk Catalytic dom 99.9 6.8E-26 1.5E-30 221.2 15.3 155 1-162 119-276 (280)
284 KOG1006|consensus 99.9 4.1E-27 8.9E-32 215.6 5.9 167 1-171 164-335 (361)
285 cd06629 STKc_MAPKKK_Bck1_like 99.9 1E-25 2.2E-30 219.2 16.1 163 1-166 105-272 (272)
286 cd06630 STKc_MEKK1 Catalytic d 99.9 5.9E-26 1.3E-30 220.0 14.3 161 1-167 100-268 (268)
287 cd07877 STKc_p38alpha_MAPK14 C 99.9 5E-26 1.1E-30 229.6 14.4 164 1-171 117-308 (345)
288 cd06634 STKc_TAO2 Catalytic do 99.9 7.7E-26 1.7E-30 224.6 15.3 162 1-169 112-273 (308)
289 cd06606 STKc_MAPKKK Catalytic 99.9 7.5E-26 1.6E-30 217.1 14.8 160 1-166 98-260 (260)
290 KOG0197|consensus 99.9 4.5E-26 9.8E-31 228.1 13.6 153 2-161 301-455 (468)
291 KOG2345|consensus 99.9 1.4E-26 3E-31 210.4 8.6 161 1-163 124-296 (302)
292 cd05094 PTKc_TrkC Catalytic do 99.9 9.6E-26 2.1E-30 221.9 15.4 155 1-162 120-277 (291)
293 cd05613 STKc_MSK1_N N-terminal 99.9 5.6E-26 1.2E-30 223.3 13.6 170 1-175 102-280 (290)
294 cd08530 STKc_CNK2-like Catalyt 99.9 1.5E-25 3.2E-30 215.4 16.2 157 1-166 100-256 (256)
295 cd07852 STKc_MAPK15 Catalytic 99.9 8.1E-26 1.7E-30 227.3 14.9 166 1-170 104-302 (337)
296 cd05109 PTKc_HER2 Catalytic do 99.9 1.2E-25 2.6E-30 219.7 15.4 155 1-162 106-263 (279)
297 KOG0193|consensus 99.9 1.5E-26 3.2E-31 233.2 9.2 159 2-162 486-648 (678)
298 KOG1989|consensus 99.9 2E-26 4.3E-31 242.4 10.5 155 1-162 141-306 (738)
299 cd05581 STKc_PDK1 Catalytic do 99.9 9.1E-26 2E-30 219.9 14.5 158 1-166 99-280 (280)
300 cd05052 PTKc_Abl Catalytic dom 99.9 1.6E-25 3.5E-30 216.8 16.0 155 1-162 101-257 (263)
301 PLN03225 Serine/threonine-prot 99.9 9E-26 1.9E-30 240.4 15.5 168 3-172 254-459 (566)
302 cd06641 STKc_MST3 Catalytic do 99.9 8.9E-26 1.9E-30 220.4 14.2 162 1-169 98-259 (277)
303 cd07864 STKc_CDK12 Catalytic d 99.9 1.1E-25 2.5E-30 222.2 14.9 162 1-166 113-302 (302)
304 cd05583 STKc_MSK_N N-terminal 99.9 1.1E-25 2.4E-30 220.9 14.7 177 1-183 102-286 (288)
305 cd05035 PTKc_Axl_like Catalyti 99.9 1.4E-25 2.9E-30 218.0 15.0 156 1-163 110-268 (273)
306 cd06635 STKc_TAO1 Catalytic do 99.9 2.3E-25 5E-30 222.0 17.1 163 1-170 122-284 (317)
307 cd05104 PTKc_Kit Catalytic dom 99.9 1.3E-25 2.9E-30 229.1 15.6 157 1-163 211-370 (375)
308 cd05096 PTKc_DDR1 Catalytic do 99.9 1.3E-25 2.8E-30 222.4 15.0 156 2-162 136-300 (304)
309 cd05032 PTKc_InsR_like Catalyt 99.9 1.8E-25 3.9E-30 217.9 15.3 154 2-162 117-273 (277)
310 cd05060 PTKc_Syk_like Catalyti 99.9 2.2E-25 4.8E-30 215.0 15.6 155 1-162 92-250 (257)
311 cd05062 PTKc_IGF-1R Catalytic 99.9 1.5E-25 3.4E-30 218.6 14.7 155 2-163 117-274 (277)
312 cd07830 STKc_MAK_like Catalyti 99.9 2.7E-25 5.9E-30 217.2 16.4 161 1-166 96-283 (283)
313 cd08226 PK_STRAD_beta Pseudoki 99.9 6.8E-26 1.5E-30 227.0 12.4 168 1-171 98-316 (328)
314 cd06653 STKc_MEKK3_like_1 Cata 99.9 2E-25 4.4E-30 216.2 15.3 159 1-166 103-264 (264)
315 cd05092 PTKc_TrkA Catalytic do 99.9 1.7E-25 3.6E-30 218.9 14.9 155 1-162 119-276 (280)
316 cd08228 STKc_Nek6 Catalytic do 99.9 1.2E-25 2.6E-30 217.9 13.7 156 1-162 103-260 (267)
317 cd07880 STKc_p38gamma_MAPK12 C 99.9 1.3E-25 2.9E-30 226.4 14.5 164 1-171 115-306 (343)
318 cd07840 STKc_CDK9_like Catalyt 99.9 1.4E-25 3E-30 219.4 14.3 162 1-166 97-287 (287)
319 cd05115 PTKc_Zap-70 Catalytic 99.9 2.3E-25 5.1E-30 215.2 15.6 155 1-162 92-250 (257)
320 cd05090 PTKc_Ror1 Catalytic do 99.9 2E-25 4.3E-30 218.5 15.1 156 1-163 121-279 (283)
321 KOG4236|consensus 99.9 7.2E-27 1.6E-31 231.0 4.8 161 1-169 661-825 (888)
322 KOG0586|consensus 99.9 1.8E-26 3.8E-31 233.7 7.8 164 1-172 152-315 (596)
323 cd05036 PTKc_ALK_LTK Catalytic 99.9 2.1E-25 4.6E-30 217.8 15.1 156 1-163 113-274 (277)
324 PLN00181 protein SPA1-RELATED; 99.9 4.8E-26 1E-30 253.5 11.8 160 1-169 77-271 (793)
325 cd05108 PTKc_EGFR Catalytic do 99.9 2E-25 4.3E-30 222.4 14.9 156 1-163 106-264 (316)
326 cd05082 PTKc_Csk Catalytic dom 99.9 2.3E-25 4.9E-30 214.8 14.8 152 1-162 99-251 (256)
327 cd05148 PTKc_Srm_Brk Catalytic 99.9 2.8E-25 6.1E-30 214.5 15.4 155 1-162 101-256 (261)
328 cd05053 PTKc_FGFR Catalytic do 99.9 1.9E-25 4.2E-30 219.7 14.5 156 1-163 129-287 (293)
329 cd08229 STKc_Nek7 Catalytic do 99.9 2.1E-25 4.6E-30 216.2 14.5 156 1-162 103-260 (267)
330 cd05111 PTK_HER3 Pseudokinase 99.9 3.6E-25 7.8E-30 216.5 16.2 155 1-162 106-263 (279)
331 cd05088 PTKc_Tie2 Catalytic do 99.9 1.5E-25 3.3E-30 221.9 13.7 155 1-163 121-276 (303)
332 cd05047 PTKc_Tie Catalytic dom 99.9 2.9E-25 6.4E-30 215.9 14.9 154 1-162 109-263 (270)
333 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 3.8E-25 8.3E-30 213.7 15.5 155 1-162 99-255 (260)
334 cd05113 PTKc_Btk_Bmx Catalytic 99.9 3.5E-25 7.6E-30 213.7 15.1 156 1-163 97-254 (256)
335 cd05069 PTKc_Yes Catalytic dom 99.9 4.3E-25 9.4E-30 213.4 15.6 155 1-162 99-255 (260)
336 cd05059 PTKc_Tec_like Catalyti 99.9 3.9E-25 8.5E-30 213.2 15.2 156 1-163 97-254 (256)
337 cd05114 PTKc_Tec_Rlk Catalytic 99.9 4.4E-25 9.5E-30 212.8 15.4 155 1-162 97-253 (256)
338 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 3E-25 6.5E-30 217.5 14.5 160 1-168 100-271 (284)
339 cd05064 PTKc_EphR_A10 Catalyti 99.9 3.9E-25 8.4E-30 214.7 15.1 155 1-162 104-260 (266)
340 cd05067 PTKc_Lck_Blk Catalytic 99.9 4.1E-25 8.9E-30 213.5 15.0 155 1-162 99-255 (260)
341 cd05040 PTKc_Ack_like Catalyti 99.9 6.4E-25 1.4E-29 211.5 15.9 156 1-162 94-253 (257)
342 cd05084 PTKc_Fes Catalytic dom 99.9 4.7E-25 1E-29 211.9 14.9 155 1-162 91-248 (252)
343 cd05072 PTKc_Lyn Catalytic dom 99.9 5.1E-25 1.1E-29 212.8 15.1 155 1-162 100-256 (261)
344 cd05045 PTKc_RET Catalytic dom 99.9 5E-25 1.1E-29 216.6 15.3 155 1-162 124-281 (290)
345 cd05033 PTKc_EphR Catalytic do 99.9 5E-25 1.1E-29 213.6 15.1 156 1-163 103-261 (266)
346 cd05051 PTKc_DDR Catalytic dom 99.9 4.8E-25 1E-29 217.0 15.2 157 1-162 127-292 (296)
347 cd05058 PTKc_Met_Ron Catalytic 99.9 5.7E-25 1.2E-29 212.5 15.3 154 2-162 96-254 (262)
348 cd05099 PTKc_FGFR4 Catalytic d 99.9 6.6E-25 1.4E-29 218.4 16.0 155 1-162 131-288 (314)
349 cd05101 PTKc_FGFR2 Catalytic d 99.9 6.6E-25 1.4E-29 217.3 15.6 156 1-163 134-292 (304)
350 cd05055 PTKc_PDGFR Catalytic d 99.9 6.2E-25 1.4E-29 217.5 15.4 156 1-162 138-296 (302)
351 cd05098 PTKc_FGFR1 Catalytic d 99.9 4.7E-25 1E-29 218.7 14.4 156 1-163 137-295 (307)
352 cd05071 PTKc_Src Catalytic dom 99.9 8.8E-25 1.9E-29 211.7 15.8 155 1-162 99-255 (262)
353 cd05068 PTKc_Frk_like Catalyti 99.9 9.1E-25 2E-29 211.2 15.7 155 1-162 100-256 (261)
354 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 7.3E-25 1.6E-29 212.1 15.0 156 1-162 103-260 (267)
355 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 8.2E-25 1.8E-29 219.3 14.8 162 1-169 105-294 (328)
356 cd05042 PTKc_Aatyk Catalytic d 99.9 1E-24 2.2E-29 211.8 14.9 160 2-162 98-265 (269)
357 KOG1035|consensus 99.9 5.5E-25 1.2E-29 236.6 13.9 160 3-167 696-875 (1351)
358 smart00219 TyrKc Tyrosine kina 99.9 1.6E-24 3.4E-29 208.4 15.7 155 1-162 100-256 (258)
359 cd05085 PTKc_Fer Catalytic dom 99.9 1.8E-24 3.8E-29 207.6 16.0 155 1-162 90-246 (250)
360 cd05043 PTK_Ryk Pseudokinase d 99.9 1.1E-24 2.4E-29 212.8 14.8 155 1-162 114-271 (280)
361 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 1.1E-24 2.5E-29 213.2 14.8 156 1-162 104-276 (283)
362 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 1.2E-24 2.7E-29 210.8 14.6 151 1-163 102-260 (262)
363 cd05041 PTKc_Fes_like Catalyti 99.9 1.6E-24 3.6E-29 207.9 15.0 155 1-162 90-247 (251)
364 cd05039 PTKc_Csk_like Catalyti 99.9 1.9E-24 4.2E-29 208.2 15.5 152 1-162 99-251 (256)
365 cd05034 PTKc_Src_like Catalyti 99.9 1.6E-24 3.6E-29 209.2 15.0 155 1-162 100-256 (261)
366 cd05095 PTKc_DDR2 Catalytic do 99.9 1.8E-24 3.9E-29 213.4 15.5 157 1-162 127-292 (296)
367 cd05083 PTKc_Chk Catalytic dom 99.9 1.8E-24 3.8E-29 208.3 15.1 152 1-162 97-249 (254)
368 cd05110 PTKc_HER4 Catalytic do 99.9 1.8E-24 4E-29 214.1 15.4 156 1-163 106-264 (303)
369 cd05050 PTKc_Musk Catalytic do 99.9 2E-24 4.3E-29 212.0 15.1 155 1-162 127-284 (288)
370 cd05074 PTKc_Tyro3 Catalytic d 99.9 1.8E-24 4E-29 210.3 14.6 156 1-163 110-268 (273)
371 cd05044 PTKc_c-ros Catalytic d 99.9 2.4E-24 5.2E-29 208.9 15.2 155 1-162 103-265 (269)
372 PF07714 Pkinase_Tyr: Protein 99.9 5.9E-25 1.3E-29 212.7 10.7 155 1-162 100-257 (259)
373 PRK13184 pknD serine/threonine 99.9 1.4E-24 3.1E-29 236.6 14.8 154 3-161 112-283 (932)
374 smart00220 S_TKc Serine/Threon 99.9 2.9E-24 6.3E-29 203.7 15.1 160 1-166 84-244 (244)
375 cd05056 PTKc_FAK Catalytic dom 99.9 2.9E-24 6.3E-29 208.7 15.3 156 1-163 104-261 (270)
376 cd05063 PTKc_EphR_A2 Catalytic 99.9 3.2E-24 7E-29 208.1 15.5 155 1-162 104-262 (268)
377 cd05100 PTKc_FGFR3 Catalytic d 99.9 2.4E-24 5.2E-29 216.3 15.0 155 2-163 132-289 (334)
378 KOG0668|consensus 99.9 1.3E-24 2.7E-29 195.3 11.4 165 1-170 129-329 (338)
379 cd05105 PTKc_PDGFR_alpha Catal 99.9 2.5E-24 5.4E-29 221.1 15.1 156 1-162 234-392 (400)
380 KOG1027|consensus 99.9 3.8E-25 8.3E-30 230.0 8.6 158 5-169 607-773 (903)
381 cd05112 PTKc_Itk Catalytic dom 99.9 3.5E-24 7.7E-29 206.2 14.9 156 1-163 97-254 (256)
382 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 3.5E-24 7.6E-29 206.9 14.9 151 1-163 97-256 (258)
383 cd05103 PTKc_VEGFR2 Catalytic 99.9 3.6E-24 7.8E-29 215.9 15.1 157 1-163 176-335 (343)
384 cd05097 PTKc_DDR_like Catalyti 99.9 4.1E-24 8.9E-29 210.7 15.2 156 2-162 127-291 (295)
385 cd05073 PTKc_Hck Catalytic dom 99.9 5.4E-24 1.2E-28 205.8 15.6 154 2-162 100-255 (260)
386 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 6.1E-24 1.3E-28 206.4 16.0 160 2-162 98-265 (269)
387 cd05066 PTKc_EphR_A Catalytic 99.9 4.7E-24 1E-28 207.0 14.8 155 1-162 103-261 (267)
388 cd05057 PTKc_EGFR_like Catalyt 99.9 6.1E-24 1.3E-28 207.6 15.7 155 1-162 106-263 (279)
389 cd05086 PTKc_Aatyk2 Catalytic 99.9 7E-24 1.5E-28 206.1 16.0 160 2-162 97-264 (268)
390 cd08528 STKc_Nek10 Catalytic d 99.9 4.1E-24 8.8E-29 207.5 14.3 156 1-163 110-266 (269)
391 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 4.7E-24 1E-28 205.5 14.5 151 1-162 98-256 (259)
392 KOG0664|consensus 99.9 1.1E-24 2.3E-29 200.3 8.5 165 1-169 153-349 (449)
393 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 5.5E-24 1.2E-28 208.5 14.1 157 1-163 106-279 (284)
394 cd05610 STKc_MASTL Catalytic d 99.9 5.5E-24 1.2E-28 231.9 15.0 107 65-176 541-647 (669)
395 cd05046 PTK_CCK4 Pseudokinase 99.9 9.1E-24 2E-28 205.7 14.7 157 1-163 114-272 (275)
396 cd05065 PTKc_EphR_B Catalytic 99.9 1.1E-23 2.3E-28 204.6 14.8 155 1-162 103-263 (269)
397 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.4E-23 3E-28 215.5 15.5 157 1-163 236-395 (401)
398 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 1.4E-23 3.1E-28 204.8 14.7 151 1-163 114-272 (274)
399 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.3E-23 2.8E-28 205.8 13.7 156 1-162 105-278 (284)
400 KOG0670|consensus 99.9 1.4E-24 3.1E-29 214.8 6.5 160 2-168 534-751 (752)
401 PLN03224 probable serine/threo 99.9 5.5E-23 1.2E-27 214.2 16.1 167 2-168 307-505 (507)
402 KOG1026|consensus 99.9 1.9E-23 4.1E-28 219.2 12.2 154 1-161 600-756 (774)
403 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 3.5E-23 7.6E-28 202.2 12.8 156 1-162 106-278 (284)
404 KOG0984|consensus 99.9 2.7E-23 6E-28 184.1 8.9 129 1-131 145-275 (282)
405 KOG1151|consensus 99.9 3.7E-23 7.9E-28 201.2 10.5 167 1-168 565-746 (775)
406 KOG1095|consensus 99.9 1.7E-22 3.6E-27 219.3 13.0 155 1-162 799-956 (1025)
407 KOG0194|consensus 99.9 4.4E-22 9.4E-27 202.4 9.6 156 1-162 259-415 (474)
408 KOG4257|consensus 99.9 5E-22 1.1E-26 200.4 8.7 154 2-162 489-644 (974)
409 KOG0576|consensus 99.9 9E-22 1.9E-26 200.3 9.2 167 1-169 109-277 (829)
410 KOG1187|consensus 99.8 3.5E-21 7.6E-26 193.8 11.0 156 1-162 171-347 (361)
411 KOG4250|consensus 99.8 3.7E-21 8.1E-26 197.8 9.1 150 1-155 117-296 (732)
412 KOG0199|consensus 99.8 1.1E-20 2.4E-25 193.0 11.9 155 3-164 211-369 (1039)
413 KOG0200|consensus 99.8 2.4E-20 5.1E-25 200.8 14.8 155 1-162 415-574 (609)
414 KOG1167|consensus 99.8 9.9E-21 2.1E-25 184.3 10.1 166 1-170 129-388 (418)
415 KOG0590|consensus 99.8 4.1E-21 8.9E-26 204.4 8.0 167 1-172 417-594 (601)
416 KOG1290|consensus 99.8 3.4E-20 7.4E-25 183.0 10.9 102 65-171 412-558 (590)
417 KOG0606|consensus 99.8 1.5E-20 3.4E-25 200.4 8.4 159 12-175 151-327 (1205)
418 KOG1024|consensus 99.8 8.6E-20 1.9E-24 175.7 12.6 154 2-162 394-550 (563)
419 KOG1345|consensus 99.8 3.7E-20 8E-25 170.5 8.4 163 2-167 119-291 (378)
420 KOG0196|consensus 99.8 1.2E-20 2.7E-25 195.0 5.8 153 4-163 731-887 (996)
421 KOG4278|consensus 99.8 1.8E-19 4E-24 181.8 12.2 149 5-162 366-518 (1157)
422 KOG1094|consensus 99.8 1E-19 2.2E-24 182.8 10.1 152 6-162 639-799 (807)
423 KOG0603|consensus 99.8 6.4E-20 1.4E-24 187.2 5.7 167 2-186 95-266 (612)
424 PLN00113 leucine-rich repeat r 99.8 2.7E-19 5.9E-24 204.3 10.4 153 1-163 777-947 (968)
425 cd00180 PKc Catalytic domain o 99.8 1.5E-18 3.3E-23 160.0 12.0 126 1-164 89-215 (215)
426 KOG1025|consensus 99.8 2.9E-18 6.4E-23 178.2 12.9 153 3-162 797-952 (1177)
427 KOG1152|consensus 99.7 7E-19 1.5E-23 176.7 4.8 105 1-111 667-771 (772)
428 KOG3653|consensus 99.7 4.4E-18 9.5E-23 167.8 7.6 158 1-158 304-494 (534)
429 PF14531 Kinase-like: Kinase-l 99.7 3.7E-18 8.1E-23 164.2 4.5 138 7-154 148-288 (288)
430 KOG2052|consensus 99.7 1E-16 2.2E-21 157.2 11.4 158 1-161 305-497 (513)
431 smart00221 STYKc Protein kinas 99.7 2.4E-16 5.2E-21 147.9 11.1 121 1-125 95-217 (225)
432 KOG1240|consensus 99.7 2E-16 4.3E-21 169.5 9.9 158 2-163 118-291 (1431)
433 COG0515 SPS1 Serine/threonine 99.7 1.4E-15 3E-20 149.4 14.8 167 1-169 98-281 (384)
434 KOG4158|consensus 99.6 1.1E-15 2.4E-20 147.9 11.3 155 2-158 339-505 (598)
435 KOG1033|consensus 99.6 5.2E-16 1.1E-20 155.9 4.5 151 3-166 358-515 (516)
436 KOG1164|consensus 99.6 2.3E-14 4.9E-19 143.2 13.2 157 1-162 119-292 (322)
437 KOG1165|consensus 99.4 2.1E-12 4.6E-17 122.8 12.0 152 1-157 121-289 (449)
438 KOG1163|consensus 99.4 1.1E-12 2.3E-17 119.7 8.4 153 1-158 108-275 (341)
439 KOG1023|consensus 99.4 1.8E-12 3.9E-17 132.8 10.8 159 4-162 48-219 (484)
440 KOG0590|consensus 99.4 8.8E-14 1.9E-18 148.5 0.4 163 2-168 121-291 (601)
441 KOG0606|consensus 99.3 2.7E-12 5.8E-17 138.2 6.6 172 3-179 903-1108(1205)
442 KOG0195|consensus 99.3 9E-12 1.9E-16 115.5 9.1 148 3-161 288-440 (448)
443 PRK12274 serine/threonine prot 99.3 5.7E-12 1.2E-16 115.7 6.6 103 7-113 94-211 (218)
444 PRK09188 serine/threonine prot 99.2 1.5E-11 3.3E-16 123.5 6.5 72 7-78 114-194 (365)
445 KOG2137|consensus 99.1 8.8E-11 1.9E-15 122.2 6.9 167 11-183 106-285 (700)
446 cd05147 RIO1_euk RIO kinase fa 99.1 1.7E-10 3.7E-15 106.2 5.9 54 1-55 114-168 (190)
447 PRK10359 lipopolysaccharide co 99.0 1.2E-10 2.5E-15 109.2 3.2 76 9-102 140-215 (232)
448 cd05145 RIO1_like RIO kinase f 99.0 4.5E-10 9.7E-15 103.4 6.5 54 1-55 114-168 (190)
449 KOG1166|consensus 99.0 5.2E-10 1.1E-14 122.7 7.3 102 1-107 791-901 (974)
450 KOG1266|consensus 98.9 1.4E-09 2.9E-14 103.9 6.4 159 1-173 173-341 (458)
451 KOG0601|consensus 98.9 1.3E-09 2.8E-14 112.2 4.1 161 1-169 215-385 (524)
452 smart00090 RIO RIO-like kinase 98.7 1.2E-08 2.6E-13 97.2 5.9 52 3-55 147-199 (237)
453 COG4248 Uncharacterized protei 98.6 5E-07 1.1E-11 89.5 13.4 156 3-159 116-292 (637)
454 PRK01723 3-deoxy-D-manno-octul 98.6 5.2E-08 1.1E-12 93.0 5.8 45 9-53 147-191 (239)
455 cd05144 RIO2_C RIO kinase fami 98.6 5.9E-08 1.3E-12 89.8 5.9 51 5-55 126-176 (198)
456 PRK10345 hypothetical protein; 98.6 8.4E-08 1.8E-12 89.4 5.4 45 7-51 107-156 (210)
457 cd05119 RIO RIO kinase family, 98.5 9.9E-08 2.1E-12 87.3 5.4 51 4-55 114-165 (187)
458 cd01363 Motor_domain Myosin an 98.5 2.4E-07 5.3E-12 84.8 5.7 89 260-354 8-98 (186)
459 KOG1243|consensus 98.4 1.2E-06 2.5E-11 91.7 10.7 98 2-106 102-200 (690)
460 TIGR03724 arch_bud32 Kae1-asso 98.4 4.7E-07 1E-11 83.6 6.0 46 8-54 94-139 (199)
461 PRK14879 serine/threonine prot 98.4 5.8E-07 1.3E-11 83.8 6.2 48 5-53 96-143 (211)
462 KOG0601|consensus 98.3 3.4E-07 7.4E-12 94.5 4.0 154 1-167 363-518 (524)
463 PRK09605 bifunctional UGMP fam 98.3 6.6E-07 1.4E-11 95.7 5.5 48 6-54 430-477 (535)
464 cd05146 RIO3_euk RIO kinase fa 98.3 1.4E-06 3E-11 80.0 5.8 54 2-56 122-176 (197)
465 KOG0027|consensus 98.1 1.1E-07 2.4E-12 84.0 -4.8 100 219-320 41-149 (151)
466 cd05120 APH_ChoK_like Aminogly 98.0 7.4E-06 1.6E-10 71.1 5.7 50 4-53 86-138 (155)
467 COG5126 FRQ1 Ca2+-binding prot 98.0 3.1E-07 6.6E-12 80.4 -3.8 114 201-318 36-154 (160)
468 cd05151 ChoK Choline Kinase (C 97.9 2.3E-05 4.9E-10 70.2 5.6 46 7-53 86-136 (170)
469 PRK15123 lipopolysaccharide co 97.8 3.4E-05 7.4E-10 74.7 6.3 50 3-52 137-193 (268)
470 PF06293 Kdo: Lipopolysacchari 97.8 3.2E-05 7E-10 72.0 5.8 52 2-53 116-170 (206)
471 COG3642 Mn2+-dependent serine/ 97.8 4.2E-05 9E-10 68.5 5.5 45 8-53 96-140 (204)
472 TIGR01982 UbiB 2-polyprenylphe 97.6 8.3E-05 1.8E-09 77.3 6.2 48 8-55 260-308 (437)
473 PF01163 RIO1: RIO1 family; I 97.6 6.6E-05 1.4E-09 68.6 4.1 51 4-55 106-157 (188)
474 cd05022 S-100A13 S-100A13: S-1 97.5 6.5E-06 1.4E-10 65.3 -3.4 63 259-323 12-78 (89)
475 KOG3087|consensus 97.5 0.00021 4.7E-09 63.8 5.7 48 7-54 116-166 (229)
476 KOG3741|consensus 97.4 0.0011 2.3E-08 68.0 10.8 130 1-163 390-521 (655)
477 PRK09902 hypothetical protein; 97.1 0.00099 2.1E-08 61.6 5.8 51 3-53 127-179 (216)
478 KOG1035|consensus 97.1 0.0017 3.8E-08 72.5 8.4 153 2-170 284-441 (1351)
479 PRK04750 ubiB putative ubiquin 97.0 0.00042 9.2E-09 73.4 3.5 36 20-55 276-315 (537)
480 cd05026 S-100Z S-100Z: S-100Z 97.0 5.6E-05 1.2E-09 60.8 -2.5 65 260-324 15-85 (93)
481 PF06176 WaaY: Lipopolysacchar 96.9 0.0013 2.8E-08 61.1 5.4 43 9-52 140-182 (229)
482 cd05027 S-100B S-100B: S-100B 96.7 0.00016 3.4E-09 57.5 -2.6 67 259-325 12-84 (88)
483 KOG0576|consensus 96.6 0.00054 1.2E-08 71.8 0.3 153 5-170 337-491 (829)
484 cd05023 S-100A11 S-100A11: S-1 96.4 0.00022 4.8E-09 56.7 -3.3 61 260-322 14-82 (89)
485 COG0478 RIO-like serine/threon 96.4 0.0063 1.4E-07 58.0 5.7 51 3-53 201-251 (304)
486 PF00036 EF-hand_1: EF hand; 96.3 0.0019 4.1E-08 39.6 1.3 28 293-320 1-28 (29)
487 KOG0044|consensus 96.1 0.0002 4.3E-09 65.1 -5.5 122 207-328 49-186 (193)
488 cd05154 ACAD10_11_like Acyl-Co 95.9 0.015 3.3E-07 54.0 6.0 31 23-53 174-206 (223)
489 cd05025 S-100A1 S-100A1: S-100 95.8 0.00086 1.9E-08 53.7 -2.5 69 259-327 13-87 (92)
490 COG1718 RIO1 Serine/threonine 95.7 0.022 4.7E-07 53.8 6.0 52 4-56 166-218 (268)
491 PTZ00183 centrin; Provisional 95.7 0.00055 1.2E-08 60.5 -4.6 96 222-319 53-153 (158)
492 cd05029 S-100A6 S-100A6: S-100 95.6 0.0011 2.3E-08 52.7 -2.7 63 260-324 15-83 (88)
493 PTZ00184 calmodulin; Provision 95.6 0.00076 1.6E-08 58.8 -4.2 95 223-319 48-147 (149)
494 cd00052 EH Eps15 homology doma 95.5 0.001 2.3E-08 49.4 -2.9 61 259-322 3-63 (67)
495 PF13499 EF-hand_7: EF-hand do 95.5 0.00045 9.8E-09 51.4 -5.0 58 259-318 4-66 (66)
496 KOG0028|consensus 95.3 0.00055 1.2E-08 59.0 -5.6 96 222-320 69-170 (172)
497 cd05031 S-100A10_like S-100A10 95.2 0.0017 3.8E-08 52.2 -2.7 62 259-320 12-79 (94)
498 KOG1826|consensus 95.2 0.012 2.6E-07 67.8 2.8 143 14-166 1345-1495(2724)
499 KOG0034|consensus 95.0 0.0014 3.1E-08 59.4 -4.1 91 228-319 72-174 (187)
500 KOG0027|consensus 95.0 0.0021 4.5E-08 56.7 -3.2 69 259-329 12-81 (151)
No 1
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=3.8e-85 Score=704.76 Aligned_cols=287 Identities=29% Similarity=0.475 Sum_probs=273.8
Q ss_pred hhhhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHH
Q psy9090 190 TMHVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQ 269 (488)
Q Consensus 190 ~~~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~ 269 (488)
...++|+..|..+++++|+++|++||....||||.|-++++|||+.+++||..+.+..|.++.+.+.+||+|+||+.+|+
T Consensus 65 ~~~vdDLt~LSyLNEpsVl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~ 144 (1463)
T COG5022 65 FDGVDDLTELSYLNEPAVLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLGIYTDDIIQSYSGKNRLELEPHVFAIAEEAYR 144 (1463)
T ss_pred ccCchhhhhhhccCcHHHHHHHHHHhhcCceeEEeeeEEEEecCcccCCCccHHHHHHhccCccccCCchHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCc----hhhhHhhhcchhhhhhhccccCCCCCCCccceeEEE
Q psy9090 270 DMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAA----KVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQV 345 (488)
Q Consensus 270 ~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~----~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~ 345 (488)
.|.+.+++|+|||||||||||||++|.||+|++..+++.. +++++|++.||||||||||||+|||||||||||++|
T Consensus 145 ~lls~~eNQtIiISGESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI 224 (1463)
T COG5022 145 NLLSEKENQTIIISGESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKI 224 (1463)
T ss_pred HHHhcCCCceEEEecCCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEE
Confidence 9999999999999999999999999999999999987755 899999999999999999999999999999999999
Q ss_pred EECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCC
Q psy9090 346 TFGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRET 425 (488)
Q Consensus 346 ~~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~ 425 (488)
.||..|.|+||+|++|||||||||+ |..+|||||||||||+| +++..++.+++..|.+|.||+++.+ ...+
T Consensus 225 ~Fd~~g~I~GA~I~~YLLEKSRVV~-Q~~~ERNYHIFYQll~G-~~~~~k~~~~~~~~~dY~Yl~~~~~-------~~I~ 295 (1463)
T COG5022 225 EFDENGEICGAKIETYLLEKSRVVH-QNKNERNYHIFYQLLAG-DPEELKKLLLLQNPKDYIYLSQGGC-------DKID 295 (1463)
T ss_pred EECCCCceechhhhhhhhhhhhhcc-CCCCccchhhhhhHhcC-ChHHHHHHhhccChHhhHhHhhcCC-------CcCC
Confidence 9999999999999999999999995 99999999999999999 4556777788899999999998743 4578
Q ss_pred CCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCcccccCChhhhc
Q psy9090 426 PDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAENTAELANPEVAA 485 (488)
Q Consensus 426 ~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~~~~~~~~~~~~ 485 (488)
++||+++|+.|+.||++|||+++++..||+|||||||||||+|.++.+|++.+.++++++
T Consensus 296 gIdD~kefk~t~~AlktiGi~~eeq~~IF~iLAaILhiGNIef~~~r~g~a~~~~~~~~~ 355 (1463)
T COG5022 296 GIDDAKEFKITLDALKTIGIDEEEQDQIFKILAAILHIGNIEFKEDRNGAAIFSDNSVLD 355 (1463)
T ss_pred CcccHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHhhcceeeeecccchhhcCCchHHH
Confidence 999999999999999999999999999999999999999999999889999999988776
No 2
>KOG0164|consensus
Probab=100.00 E-value=3.4e-82 Score=634.35 Aligned_cols=275 Identities=31% Similarity=0.516 Sum_probs=255.8
Q ss_pred hhhhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHH
Q psy9090 190 TMHVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQ 269 (488)
Q Consensus 190 ~~~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~ 269 (488)
...++|+..++++++++++++|+.||..+.||||+|+++++|||+..++||+++++..|.++...+.+||+|+|||.||+
T Consensus 7 ~~Gv~DfVLle~~~~~~f~~NLrlRf~~g~IYTyIGeV~VsvNPYrql~IYg~~ti~kYkgre~yE~~PHlfAiad~aYr 86 (1001)
T KOG0164|consen 7 EVGVQDFVLLETVSEESFMENLRLRFENGRIYTYIGEVLVSVNPYRQLNIYGPETIEKYKGREFYERPPHLFAIADAAYR 86 (1001)
T ss_pred ccCceeeEeeccccHHHHHHHHHHHHhcCceEEEEccEEEEecchhhcCccCHHHHHHhCCeeecccCchHHHhHHHHHH
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcC----CC-chhhhHhhhcchhhhhhhccccCCCCCCCccceeEE
Q psy9090 270 DMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQ----GA-AKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQ 344 (488)
Q Consensus 270 ~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~----g~-~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~ 344 (488)
.|.+..++|||+|||||||||||++|.||+|++.... |. -.+.+.++++|++|||||||||.||||||||||||.
T Consensus 87 slk~r~rDtcI~ISGESGAGKTEASK~iMqYiAAvtn~~qq~eierVKn~LLqSN~VLEAFGNAKT~RNdNSSRFGKYMD 166 (1001)
T KOG0164|consen 87 SLKRRSRDTCILISGESGAGKTEASKIIMQYIAAVTNASQQGEIERVKNVLLQSNCVLEAFGNAKTNRNDNSSRFGKYMD 166 (1001)
T ss_pred HHHhccCCeEEEEecCCCCCccHHHHHHHHHHHHhcCccccchHHHHHHHHHhcchHHHHhcccccccCCchhhhhccee
Confidence 9999999999999999999999999999999998753 22 368899999999999999999999999999999999
Q ss_pred EEECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccC-CCCCCCcccccCccCCCCCCCCC
Q psy9090 345 VTFGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFL-SPGRKYRYLRADVTDDKLPKGPR 423 (488)
Q Consensus 345 ~~~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l-~~~~~~~yl~~~~~~~~~~~~~~ 423 (488)
|+||.+|.++||+|++|||||||||. |.+|||||||||||+.|+++. +...++| .++..|.||+++.. .
T Consensus 167 InFDfKGdPvGG~I~nYLLEKSRVv~-Q~~GERNFH~FYQLL~G~~e~-~Lr~l~Ler~~~~Y~ylnqg~~--------~ 236 (1001)
T KOG0164|consen 167 INFDFKGDPVGGHITNYLLEKSRVVK-QQPGERNFHIFYQLLRGGEEQ-LLRQLGLERNPQSYNYLNQGSA--------K 236 (1001)
T ss_pred eeccccCCcccchHhHHHHhhhhhhh-cCcCcchHHHHHHHHcCCcHH-HHHHhccccCcchhhhhhhhhh--------h
Confidence 99999999999999999999999995 999999999999999999775 4555666 58999999998732 2
Q ss_pred CCCCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCc
Q psy9090 424 ETPDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAEN 474 (488)
Q Consensus 424 ~~~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~ 474 (488)
+++++|+.+|+.|+.||++|||+++|++.+++|+|||||||||+|....+.
T Consensus 237 v~sinD~~dfk~V~~Am~vIgFs~eEVe~v~~iiAavLhLGNv~f~~~ed~ 287 (1001)
T KOG0164|consen 237 VSSINDASDFKAVQKAMRVIGFSEEEVESVLSIIAAVLHLGNVEFADNEDS 287 (1001)
T ss_pred hcccccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceEEeecCcc
Confidence 577889999999999999999999999999999999999999999765433
No 3
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=2.3e-80 Score=668.27 Aligned_cols=281 Identities=24% Similarity=0.388 Sum_probs=260.3
Q ss_pred hhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCC-CCCCCChhhHHHHHHHHHH
Q psy9090 192 HVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFK-SRSDNEPHIYAVADSAYQD 270 (488)
Q Consensus 192 ~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~-~~~~~~ph~f~~~d~~~~~ 270 (488)
.++|+..+..++++.++++|+.||..+.+|||+|+++++|||++.+++|.++++..|.+. ...+.|||+|+|||.||+.
T Consensus 97 ~~~Dl~~L~~lnE~~vL~nL~~Ry~~~~IYTy~G~iLIavNPyk~l~~y~~~~~~~Y~~~~~~~~lpPHifavA~~Ay~~ 176 (821)
T PTZ00014 97 TYGDIGLLPHTNIPCVLDFLKHRYLKNQIYTTADPLLVAINPFKDLGNTTNDWIRRYRDAKDSDKLPPHVFTTARRALEN 176 (821)
T ss_pred CcchhhhCCCCCHHHHHHHHHHHHcCCCCeeeECCEEEEECCCCCCCCCcHHHHHHHhCCCCcCCCCCCHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999875 5678899999999999999
Q ss_pred HHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCC--chhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEEC
Q psy9090 271 MMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGA--AKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFG 348 (488)
Q Consensus 271 ~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~--~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~ 348 (488)
|...+++|+|||||||||||||++|.||+|++..+.|. .++++.|+++||+|||||||||+|||||||||||++|+|+
T Consensus 177 m~~~~~~QsIiiSGESGAGKTe~tK~im~yla~~~~~~~~~~ie~~Il~sNpiLEAFGNAKT~rNdNSSRFGKfi~i~F~ 256 (821)
T PTZ00014 177 LHGVKKSQTIIVSGESGAGKTEATKQIMRYFASSKSGNMDLKIQNAIMAANPVLEAFGNAKTIRNNNSSRFGRFMQLQLG 256 (821)
T ss_pred HHhcCCCceEEEEcCCCCCchHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHhhccCcCCCCCcCcceeEEEEEEc
Confidence 99999999999999999999999999999999887664 4699999999999999999999999999999999999999
Q ss_pred CCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCc
Q psy9090 349 SSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDT 428 (488)
Q Consensus 349 ~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 428 (488)
..|.|.||+|.+|||||||||+ |.+||||||||||||+|+++ +++++++|.++..|+||+++ +...++.|
T Consensus 257 ~~g~i~Ga~I~~YLLEKSRVv~-q~~gERNfHIFYqLl~G~~~-~~~~~l~L~~~~~y~yL~~~--------~~~~~~~d 326 (821)
T PTZ00014 257 EEGGIRYGSIVAFLLEKSRVVT-QEDDERSYHIFYQLLKGAND-EMKEKYKLKSLEEYKYINPK--------CLDVPGID 326 (821)
T ss_pred CCCcEeeEEEEEEeccCceeee-cCCCCCCEeHHHHHHhCCCH-HHHHHcCCCChHhccccCCC--------CccCCCCc
Confidence 9999999999999999999995 99999999999999999976 56788999999999999854 23357889
Q ss_pred cHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC----CcccccCChh
Q psy9090 429 NVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA----ENTAELANPE 482 (488)
Q Consensus 429 d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~----~~~~~~~~~~ 482 (488)
|+++|++|++||+.|||+++|++.||+|||||||||||+|++.+ ++.+.+.+.+
T Consensus 327 D~~~f~~~~~A~~~lg~s~~e~~~If~ilaaILhLGNi~F~~~~~~~~~~~~~i~~~~ 384 (821)
T PTZ00014 327 DVKDFEEVMESFDSMGLSESQIEDIFSILSGVLLLGNVEIEGKEEGGLTDAAAISDES 384 (821)
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEeccccCCCCCceeccCCC
Confidence 99999999999999999999999999999999999999998653 3456665543
No 4
>KOG0162|consensus
Probab=100.00 E-value=2.9e-80 Score=620.71 Aligned_cols=289 Identities=27% Similarity=0.420 Sum_probs=274.3
Q ss_pred hhhhhhhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHH
Q psy9090 187 ELQTMHVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADS 266 (488)
Q Consensus 187 ~~~~~~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~ 266 (488)
+.+...++||..|.+++++++.++|++|+....+|||+|.++++|||++.+++|.+..+..|.++.+.+.|||+|++||+
T Consensus 14 ~~k~vGVdDm~LLsKiteesI~eNLkkRf~n~~IfTYIG~VLISVNPFk~m~~ft~~~~~~YqG~~q~E~pPHiyAladn 93 (1106)
T KOG0162|consen 14 KKKHVGVDDMVLLSKITEESINENLKKRFMNGYIFTYIGHVLISVNPFKQMPYFTEKEMELYQGAAQYENPPHIYALADN 93 (1106)
T ss_pred cceeccccceeehhhccHHHHHHHHHHHhhcCceEEEeeeEEEeecchhccccchHHHHHHhhchhhccCCchhhhhHHH
Confidence 35566899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCc---hhhhHhhhcchhhhhhhccccCCCCCCCccceeE
Q psy9090 267 AYQDMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAA---KVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYM 343 (488)
Q Consensus 267 ~~~~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~---~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~ 343 (488)
.|+.|+..+|+|||+||||||||||+++|.||+|++..+.|.- .+.+.|+++||+|||||||||+||+||||||||+
T Consensus 94 mY~nM~~~~EnQCVIISGESGAGKT~aAK~IM~YIs~vS~~g~kvq~vkdiiL~sNPLLEaFG~akTvRNnNSSR~GKY~ 173 (1106)
T KOG0162|consen 94 MYRNMKIDNENQCVIISGESGAGKTVAAKRIMQYISRVSGGGEKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYL 173 (1106)
T ss_pred HHHHhhhccccceEEEecCCCCCchHHHHHHHHHHHHhccCCcchhhhhhHhhccchHHHHhcchhhhccCCcccccceE
Confidence 9999999999999999999999999999999999999986643 5789999999999999999999999999999999
Q ss_pred EEEECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCC
Q psy9090 344 QVTFGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPR 423 (488)
Q Consensus 344 ~~~~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~ 423 (488)
+|+|+..|.++||+|++|||||||||. |.++||||||||||++|++. +.+..+++..|+.|.||+.++| ..
T Consensus 174 Ei~Fs~ggeP~ggkisNfLLEKsRVV~-q~~neRnFHIfYQ~~kgAs~-~~r~t~Gi~~pe~Y~Y~~~sg~-------~s 244 (1106)
T KOG0162|consen 174 EIQFSRGGEPDGGKISNFLLEKSRVVM-QNENERNFHIFYQLTKGASQ-EYRQTFGIQEPEYYVYLNASGC-------YS 244 (1106)
T ss_pred EEEecCCCCcCcchhhHHHHhhhhhhh-ccCCccceeeehhhhcCccH-HHHhhhCcCCchheeeeccccc-------ee
Confidence 999999999999999999999999996 99999999999999999976 6688899999999999998754 34
Q ss_pred CCCCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCcccccCChhhhc
Q psy9090 424 ETPDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAENTAELANPEVAA 485 (488)
Q Consensus 424 ~~~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~~~~~~~~~~~~ 485 (488)
.++.||.++|++|.+||++||+.++|++.||++||+|||||||.|.+ +++.+.+.+.++++
T Consensus 245 ~D~idd~kdfq~Tl~AM~vIGi~~~eQ~~v~rmva~IL~lGNIsF~E-e~~~a~V~~~~~~~ 305 (1106)
T KOG0162|consen 245 VDDIDDRKDFQETLHAMKVIGINQEEQDEVLRMVAGILHLGNISFIE-EGNYAAVSDKSVLE 305 (1106)
T ss_pred ccccchHHHHHHHHHHheeccCChHHHHHHHHHHHHHHhccceeEEe-eCCcceeccchHHH
Confidence 78899999999999999999999999999999999999999999988 78889999988876
No 5
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=8.3e-79 Score=648.89 Aligned_cols=284 Identities=30% Similarity=0.452 Sum_probs=266.3
Q ss_pred hhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHHH
Q psy9090 193 VEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDMM 272 (488)
Q Consensus 193 v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~~ 272 (488)
++|+..+..++|+.++++|+.||..+.+||++|+++++|||++.+++|.++.+..|.++.....|||+|++|++||+.|.
T Consensus 2 v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~~y~~~~~~~y~~~~~~~~~PHifavA~~Ay~~m~ 81 (671)
T cd01381 2 VEDMITLGDLHEAGILRNLLIRYKKKLIYTYTGSILVAVNPYQILPIYTADEIKLYKNKSIGELPPHIFAISDNAYTNMQ 81 (671)
T ss_pred cchhhhCCCCCHHHHHHHHHHHHccCCCeEeeCCEEEEeCCCccCCCCCHHHHHHHhcCCccccCCCHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred hcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECCCCc
Q psy9090 273 HHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGSSGK 352 (488)
Q Consensus 273 ~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~~~~ 352 (488)
+.+++|+|+|||||||||||++|.+|+|++..+++..++++.|+.+||+|||||||||+|||||||||||++|+|+..|.
T Consensus 82 ~~~~~QsIiisGESGaGKTes~K~i~~yLa~~s~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRFGK~~~l~F~~~g~ 161 (671)
T cd01381 82 REKKNQCIIISGESGAGKTESTKLILQYLAAISGKHSWIEQQILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNKRGA 161 (671)
T ss_pred HcCCCceEEEEcCCCCCeehHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhhccccCCCCCccccceeEEEEECCCCc
Confidence 99999999999999999999999999999999887788999999999999999999999999999999999999999999
Q ss_pred eeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCccHHH
Q psy9090 353 LSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDTNVAK 432 (488)
Q Consensus 353 ~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~d~~~ 432 (488)
|+||+|.+|||||||||. |.+||||||||||||+|+++ ++++.++|.++..|+||+++.+ ...++.+|+++
T Consensus 162 i~Ga~i~~yLLEksRV~~-q~~gERnfHIFYqLl~g~~~-~~~~~l~L~~~~~y~yL~~~~~-------~~~~~~dD~~~ 232 (671)
T cd01381 162 IEGAKIEQYLLEKSRIVR-QARDERNYHIFYCMLAGLST-DEKERLKLGEASDYHYLAQGGC-------ITCEGRDDAKD 232 (671)
T ss_pred EEEEEEEEEeccCCceee-cCCCCCcHHHHHHHHcCCCH-HHHHHcCCCChhhceeecCCCC-------ccCCCccHHHH
Confidence 999999999999999995 99999999999999999976 5788899999999999987643 23567889999
Q ss_pred HHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC---CcccccCChhhhc
Q psy9090 433 FQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA---ENTAELANPEVAA 485 (488)
Q Consensus 433 ~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~---~~~~~~~~~~~~~ 485 (488)
|+++++||+.|||+++|+..||+|||||||||||+|.+.+ .+.+++.+.+.++
T Consensus 233 f~~~~~al~~lG~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~i~~~~~l~ 288 (671)
T cd01381 233 FADIRSAMKVLMFTDQEIWEIFKLLAAILHIGNLRFEATEVDNLAACEVDDTPNLQ 288 (671)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEeeccCCCCCceeeCChHHHH
Confidence 9999999999999999999999999999999999998654 3467787776543
No 6
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=1.1e-78 Score=650.97 Aligned_cols=284 Identities=30% Similarity=0.479 Sum_probs=264.5
Q ss_pred hhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHH
Q psy9090 192 HVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDM 271 (488)
Q Consensus 192 ~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~ 271 (488)
.++|+..+..++++.+++.|+.||..+.+||++|+++++|||++.+++|.++.+..|.++.....|||+|+||++||+.|
T Consensus 6 ~v~Dl~~L~~l~E~~il~~L~~Ry~~~~iYT~~G~iLIavNP~k~l~ly~~~~~~~Y~~~~~~~~~PHiyaiA~~Ay~~m 85 (693)
T cd01377 6 KVEDMAELTHLNEASVLHNLRERYYSDLIYTYSGLFCVAVNPYKRLPIYTEEVVEMYRGKKREEMPPHIFAIADNAYRSM 85 (693)
T ss_pred CcchhhhCCcCCHHHHHHHHHHHHhcCCcEEeecceeEeecCCccCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCC----------CchhhhHhhhcchhhhhhhccccCCCCCCCccce
Q psy9090 272 MHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQG----------AAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVL 341 (488)
Q Consensus 272 ~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g----------~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk 341 (488)
.+.+++|+|||||||||||||++|.||+|++..+.+ ..++++.|+.+||+|||||||||+||||||||||
T Consensus 86 ~~~~~~QsIiiSGESGAGKTes~K~il~yLa~~~~~~~~~~~~~~~~~~i~~~il~snpiLEAFGNAkT~rN~NSSRFGK 165 (693)
T cd01377 86 LQDRENQSILITGESGAGKTENTKKVIQYLASVAASSKKKKQSGKGQGTLEDQILQANPILEAFGNAKTVRNDNSSRFGK 165 (693)
T ss_pred HhcCCCceEEEEcCCCCCchHHHHHHHHHHHhhcCCCCcccccccccccHHHHHHHHHHHHHHhhccccCCCCCccccce
Confidence 999999999999999999999999999999988754 2479999999999999999999999999999999
Q ss_pred eEEEEECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCC-CCCcccccCccCCCCCC
Q psy9090 342 YMQVTFGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPG-RKYRYLRADVTDDKLPK 420 (488)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~-~~~~yl~~~~~~~~~~~ 420 (488)
|++|+|+..|.|+||+|.+|||||||||. |.+||||||||||||+|+++ ++++.+.|.++ ..|+||+++.+
T Consensus 166 ~i~l~f~~~g~i~Ga~i~~yLLEksRVv~-q~~gERNfHIFYqLl~G~~~-~~~~~l~L~~~~~~y~yL~~~~~------ 237 (693)
T cd01377 166 FIRIHFGNTGKIAGADIETYLLEKSRVVF-QASGERNYHIFYQLLSGADP-ELKSMLLLTGNPNDYRYLSQGEL------ 237 (693)
T ss_pred eEEEEECCCCCEEEEEEEEEecccCceee-cCCCCCcHHHHHHHHcCCCH-HHHHHcCCCCchhcCeeeCCCCc------
Confidence 99999999999999999999999999995 99999999999999999976 66788888876 99999987642
Q ss_pred CCCCCCCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeec-CCcccccCChhhhc
Q psy9090 421 GPRETPDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESS-AENTAELANPEVAA 485 (488)
Q Consensus 421 ~~~~~~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~-~~~~~~~~~~~~~~ 485 (488)
..++.+|+++|+++++||+.|||+++|+..||+|||||||||||+|.+. .++.+++.+.+.+.
T Consensus 238 --~~~~~~d~~~f~~~~~al~~lG~~~~e~~~i~~iLaaILhLGni~F~~~~~~~~~~~~~~~~l~ 301 (693)
T cd01377 238 --TIPGVDDAEEFKLTDEAFDILGFSDEEKNSIFKIVAAILHLGNIKFKQRQREEQAELDGTEEAD 301 (693)
T ss_pred --cCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEecCCCCccccCChHHHH
Confidence 2467889999999999999999999999999999999999999999865 36677887776554
No 7
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=1.9e-78 Score=648.95 Aligned_cols=277 Identities=31% Similarity=0.504 Sum_probs=260.0
Q ss_pred hhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHHH
Q psy9090 193 VEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDMM 272 (488)
Q Consensus 193 v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~~ 272 (488)
++|+..+..++|+.++++|+.||..+.+||++|+++++|||++.+++|.++.+..|.++...+.|||+|+||++||+.|.
T Consensus 2 ~~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~Y~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~ 81 (691)
T cd01380 2 KDDLTNLSYLHEPAVLHNLRVRFIQKQIYTYSGIVLVAINPYARLPIYGEEIIQAYSGQRKGELDPHIFAIAEEAYKQMT 81 (691)
T ss_pred chhhhhCCCCCHHHHHHHHHHHHcCCCCEEeECCEEEEeCCCCCCCcCCHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCC------chhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEE
Q psy9090 273 HHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGA------AKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVT 346 (488)
Q Consensus 273 ~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~------~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~ 346 (488)
+.+++|+|+|||||||||||++|.||+|++..+.+. .++++.|+++||||||||||||+|||||||||||++|+
T Consensus 82 ~~~~~QsIiiSGESGaGKTes~K~i~~yLa~~~~~~~~~~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRFGK~~~l~ 161 (691)
T cd01380 82 RDEKNQSIIVSGESGAGKTVSAKYIMRYFASVGGSDSREVSETQVEEKVLASNPIMEAFGNAKTTRNDNSSRFGKYIQIL 161 (691)
T ss_pred hcCCCceEEEEcCCCCCchHHHHHHHHHHHHhcCCCcccccccCHHHHHHHHHHHHHHhhcCCCCCCCCccccceEEEEE
Confidence 999999999999999999999999999999887543 57999999999999999999999999999999999999
Q ss_pred ECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCC
Q psy9090 347 FGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETP 426 (488)
Q Consensus 347 ~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~ 426 (488)
|+..|.|+||+|.+|||||||||. |.+||||||||||||+|++. ++++.++|.++..|+||+++.+ ...++
T Consensus 162 f~~~g~i~Ga~i~~yLLEksRv~~-~~~gErnfHIFYqLl~g~~~-~~~~~l~L~~~~~y~yl~~~~~-------~~~~~ 232 (691)
T cd01380 162 FDKRGRIIGANMRTYLLEKSRVVF-QAPGERNYHIFYQLCAGAPS-QELKELHLGHADKFNYLNQGGA-------PTIEG 232 (691)
T ss_pred ECCCCCEEEEEEEEeeccccceee-cCCCCChhHHHHHHHhCCCH-HHHHHhCCCCHHHCccccCCCC-------ccCCC
Confidence 999999999999999999999995 99999999999999999976 5678899999999999997743 23567
Q ss_pred CccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCccccc
Q psy9090 427 DTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAENTAEL 478 (488)
Q Consensus 427 ~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~~~~~ 478 (488)
.+|+++|+++++||+.|||+++|+..||+|||||||||||+|.+.+++.+.+
T Consensus 233 ~~d~~~f~~~~~al~~lg~s~~e~~~I~~iLaaILhLGni~F~~~~~~~~~~ 284 (691)
T cd01380 233 VDDAEDFNATVQALTLLGISEEQQMDIFKLLAALLHLGNIEIEATRNDSSSI 284 (691)
T ss_pred CChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceeeeccCCcccee
Confidence 8899999999999999999999999999999999999999998776555333
No 8
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=1.5e-77 Score=641.29 Aligned_cols=287 Identities=31% Similarity=0.505 Sum_probs=262.5
Q ss_pred hhhhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCC-CCCCChhhHHHHHHHH
Q psy9090 190 TMHVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKS-RSDNEPHIYAVADSAY 268 (488)
Q Consensus 190 ~~~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~-~~~~~ph~f~~~d~~~ 268 (488)
...++|+..+..++++.+++.|+.||..+.+||++|+++++|||++.+++|.++++..|.... ....|||+|++|++||
T Consensus 6 ~~~~~Dl~~L~~lnE~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~y~~~~~~~Y~~~~~~~~lpPHiy~iA~~Ay 85 (692)
T cd01385 6 QREYDDLCNLPELTEGTLLKNLRHRFLQGHIYTYAGSILVAVNPFKFLPIYNPKYVRLYENQQRLGKLPPHIFAIADVAY 85 (692)
T ss_pred cCCCChhhhCCCCCHHHHHHHHHHHHhcCCCeEeECCEEEEECCCcCCCCCCHHHHHHHhcCCCcCCCCCCHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999998876 6788999999999999
Q ss_pred HHHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCC---CchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEE
Q psy9090 269 QDMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQG---AAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQV 345 (488)
Q Consensus 269 ~~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g---~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~ 345 (488)
+.|.+.+++|+|+|||||||||||++|.||+|++..+.. ..++++.|..+||+|||||||||+|||||||||||++|
T Consensus 86 ~~m~~~~~~QsIiisGESGAGKTet~K~il~yL~~~s~~~~~~~~i~~~i~~snpiLEAFGNAkT~~N~NSSRFGK~i~l 165 (692)
T cd01385 86 YNMLRKKVNQCIVISGESGSGKTESTNFLIHHLTALSQKGYAGSGVEQTILSAGPVLEAFGNAKTAHNNNSSRFGKFIQV 165 (692)
T ss_pred HHHHhcCCCceEEEecCCCCCchHHHHHHHHHHHHhccCCccCCcHHHHHHHHHHHHHHhhccccCCCCCccccceeEEE
Confidence 999999999999999999999999999999999987542 35799999999999999999999999999999999999
Q ss_pred EECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCC
Q psy9090 346 TFGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRET 425 (488)
Q Consensus 346 ~~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~ 425 (488)
+|+..|.|+||+|++|||||||||. |.+||||||||||||+|+++ ++++.+.|.++.+|+||+++.+. ..+
T Consensus 166 ~F~~~g~i~Ga~i~~yLLEksRV~~-q~~gERNfHIFYqll~G~~~-~~~~~~~l~~~~~y~yL~~~~~~-------~~~ 236 (692)
T cd01385 166 NYRENGMVRGAVVEKYLLEKSRIVS-QEKDERNYHVFYYLLLGASE-EERKQEFLLKQPDYFYLNQHNLK-------IED 236 (692)
T ss_pred EECCCCCEEEEEEEEeecccceeee-cCCCCchhHHHHHHHcCCCH-HHHHHhcCCChhcCCeeCCCCCc-------cCC
Confidence 9999999999999999999999995 99999999999999999987 55677777777899999876432 245
Q ss_pred CCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC----CcccccCChhhhc
Q psy9090 426 PDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA----ENTAELANPEVAA 485 (488)
Q Consensus 426 ~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~----~~~~~~~~~~~~~ 485 (488)
+.+|+++|+++++||+.|||++++++.||+|||||||||||+|.+.+ ++.+++.+++.++
T Consensus 237 ~~dd~~~f~~~~~al~~lG~~~~~~~~i~~iLaaILhLGni~F~~~~~~~~~~~~~~~~~~~l~ 300 (692)
T cd01385 237 GEDEKHEFERLKQAMEMVGFLAATQKQIFAVLSAVLLLGNVTYKKRATYHRDESLEVGNPEVVD 300 (692)
T ss_pred CCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceeeecccCCCCCceecCCHHHHH
Confidence 78899999999999999999999999999999999999999998643 4567777776544
No 9
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=2.5e-77 Score=637.12 Aligned_cols=281 Identities=31% Similarity=0.477 Sum_probs=259.3
Q ss_pred hhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHH
Q psy9090 192 HVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDM 271 (488)
Q Consensus 192 ~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~ 271 (488)
.++|+..+..++|+.++++|+.||..+.+||++|+++++|||++.+++|.++++..|.++. ..|||+|+||++||+.|
T Consensus 9 ~v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~ly~~~~~~~y~~~~--~~~PHifaiA~~Ay~~m 86 (677)
T cd01383 9 GVDDLMQLSYLNEPSVLYNLQYRYSQDLIYTKAGPVLVAVNPFKEVPLYGNDYIEAYRKKS--NDSPHVYAIADTAYNEM 86 (677)
T ss_pred CcchhhhCCCCCHHHHHHHHHHHHcCCCCeEEECCEEEEEcCCcCCCCCCHHHHHHhhCCC--CCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999998754 46999999999999999
Q ss_pred HhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECCCC
Q psy9090 272 MHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGSSG 351 (488)
Q Consensus 272 ~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~~~ 351 (488)
...+++|+|+|||||||||||++|.||+|++..+.+. .+++.|..+||+|||||||||+|||||||||||++|+|+..|
T Consensus 87 ~~~~~~QsIiisGESGaGKTe~~K~i~~yLa~~~~~~-~i~~~il~snpiLEaFGNAkT~~N~NSSRFGK~~~l~f~~~g 165 (677)
T cd01383 87 MRDEVNQSIIISGESGAGKTETAKIAMQYLASLGGGS-GIEYEILQTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETG 165 (677)
T ss_pred HHcCCCceEEEecCCCCCcchHHHHHHHHHHhhCCCC-cHHHHHHHHHHHHHHhhccccCCCCCcCccceeEEEEECCCC
Confidence 9999999999999999999999999999999987664 789999999999999999999999999999999999999999
Q ss_pred ceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCccHH
Q psy9090 352 KLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDTNVA 431 (488)
Q Consensus 352 ~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~d~~ 431 (488)
.|+||+|.+|||||||||. |.+||||||||||||+|+++ ++++.++|.++..|+||+++.+ ...++.+|++
T Consensus 166 ~i~ga~i~~yLLEksRv~~-q~~gErNfHIFYqLl~g~~~-~~~~~l~L~~~~~y~yL~~~~~-------~~~~~~dd~~ 236 (677)
T cd01383 166 KISGAKIQTFLLEKSRVVQ-CARGERSYHIFYQLCAGAPP-ALKEKLNLKSASEYKYLKQSCC-------YSINGVDDAQ 236 (677)
T ss_pred cEEEEEEEEEecCCCceec-cCCCCchhHHHHHHHcCCCH-HHHHHhCCCCHHHCceecCCCc-------ccCCCccHHH
Confidence 9999999999999999995 99999999999999999977 5678899999999999987643 2357789999
Q ss_pred HHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC-CcccccCChhhh
Q psy9090 432 KFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA-ENTAELANPEVA 484 (488)
Q Consensus 432 ~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~-~~~~~~~~~~~~ 484 (488)
+|+++++||+.|||+++|+..||+|||||||||||+|.+.+ ++.+++.+.+.+
T Consensus 237 ~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGNi~F~~~~~~~~~~~~~~~~l 290 (677)
T cd01383 237 RFHTLVEALDIVHISKEDQENVFAMLAAVLWLGNVSFTVIDNENHVEPVADEAL 290 (677)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEecCCCcccccCChHHH
Confidence 99999999999999999999999999999999999998654 334555555433
No 10
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=3.1e-77 Score=638.00 Aligned_cols=284 Identities=32% Similarity=0.478 Sum_probs=266.1
Q ss_pred hhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHHH
Q psy9090 193 VEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDMM 272 (488)
Q Consensus 193 v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~~ 272 (488)
++|+..+..++|+.++++|+.||..+.+||++|+++++|||++.+++|.++++..|.++...+.|||+|++|++||+.|.
T Consensus 2 v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~ly~~~~~~~Y~~~~~~~~~PHifaiA~~Ay~~m~ 81 (674)
T cd01378 2 VDDLVLLSKISEEAIVENLKKRFQNDLIYTYIGPVLISVNPFKQLPIYTDETIELYKGKSRYELPPHIYALADNAYRSMK 81 (674)
T ss_pred cchhhhCCCCCHHHHHHHHHHHHhcCCCeeccCCcEEEEcCCCCCCCCCHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred hcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCC---chhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECC
Q psy9090 273 HHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGA---AKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGS 349 (488)
Q Consensus 273 ~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~---~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~ 349 (488)
+.+++|+|+|||||||||||++|.+|+|++..+.+. ..+++.|.+++|+|||||||||+|||||||||||++|+|+.
T Consensus 82 ~~~~~QsIiisGESGaGKTe~~K~il~yL~~~~~~~~~~~~i~~~i~~~npiLEAFGNAkT~~N~NSSRFgk~~~l~f~~ 161 (674)
T cd01378 82 SENENQCVIISGESGAGKTEAAKKIMQYIAAVSGGGQKVERVKDVILQSNPLLEAFGNAKTLRNNNSSRFGKYMEIQFDF 161 (674)
T ss_pred HcCCCceEEEEcCCCCCcchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHHhhccccCCCCCcchhheeEEEEECC
Confidence 999999999999999999999999999999887653 35899999999999999999999999999999999999999
Q ss_pred CCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCcc
Q psy9090 350 SGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDTN 429 (488)
Q Consensus 350 ~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~d 429 (488)
.|.|+||+|.+|||||||||. |.+||||||||||||+|+++ ++++.+.|.++..|+||+++.+ ...++.+|
T Consensus 162 ~g~i~ga~i~~yLLEksRVv~-~~~gErnfHIFYqll~g~~~-~~~~~l~L~~~~~y~yL~~~~~-------~~~~~~~d 232 (674)
T cd01378 162 KGDPVGGKITNYLLEKSRVVS-QNKGERNFHIFYQLLAGASE-QLLRELGLQKPEYYYYLNQSQC-------YTVDGIDD 232 (674)
T ss_pred CCCEeeEEEEEeecCCCceee-cCCCCchhHHHHHHHcCCCH-HHHHHhCCCChhhCeeecCCCc-------cCCCCccH
Confidence 999999999999999999995 99999999999999999976 5678899999999999997743 23567889
Q ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCcccccCChhhhc
Q psy9090 430 VAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAENTAELANPEVAA 485 (488)
Q Consensus 430 ~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~~~~~~~~~~~~ 485 (488)
+++|+++++||+.|||+++|+..||+|||||||||||+|.+.+++.+.+.+.+.++
T Consensus 233 ~~~f~~~~~al~~lG~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~l~ 288 (674)
T cd01378 233 KKDFKETQNAMKVIGFSEDEQDEIFRIVAAILHLGNVQFAENGDGAAVISDKDVLD 288 (674)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEeccCCCccccCChHHHH
Confidence 99999999999999999999999999999999999999988776667888876554
No 11
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=8.2e-77 Score=632.87 Aligned_cols=279 Identities=28% Similarity=0.484 Sum_probs=259.2
Q ss_pred hhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCC-CCCchhhhhccCCCCCCCChhhHHHHHHHHHH
Q psy9090 192 HVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLN-LYGTKYHFKYKFKSRSDNEPHIYAVADSAYQD 270 (488)
Q Consensus 192 ~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~-i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~ 270 (488)
.++|+..+..++|+.++++|+.||..+.+||++|+++++|||++.++ +|.++++..|.++...+.|||+|+||++||+.
T Consensus 2 gv~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~iy~~~~~~~y~~~~~~~~pPHifaiA~~Ay~~ 81 (674)
T cd01384 2 GVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYKGAALGELSPHVFAIADAAYRA 81 (674)
T ss_pred CcchHhhCCCCCHHHHHHHHHHHHhcCCCeeeECCEEEEECCCCcCCcCCCHHHHHHhcCCCcCCCCCCHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999 99999999999998889999999999999999
Q ss_pred HHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCC----CchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEE
Q psy9090 271 MMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQG----AAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVT 346 (488)
Q Consensus 271 ~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g----~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~ 346 (488)
|.+.+++|+|+|||||||||||++|.+|+|++..+.+ ..++++.|+.+||+|||||||||+|||||||||||++|+
T Consensus 82 m~~~~~~QsIiisGESGaGKTe~~K~il~yLa~~~~~~~~~~~~i~~~il~~npiLEAFGNAkT~~N~NSSRFGK~~~l~ 161 (674)
T cd01384 82 MINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQ 161 (674)
T ss_pred HHHcCCCceEEEECCCCCCchhHHHHHHHHHHhhcCCCCcccccHHHHHHHHHHHHHHhhCCCCCCCCCcchhheeEEEE
Confidence 9999999999999999999999999999999988643 347999999999999999999999999999999999999
Q ss_pred ECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCC
Q psy9090 347 FGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETP 426 (488)
Q Consensus 347 ~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~ 426 (488)
|+..|.|+||+|.+|||||||||. |.+||||||||||||+| ++ ++++.++|.++..|+||+++.+. ..++
T Consensus 162 f~~~g~i~Ga~i~~yLLEksRv~~-~~~gErnfHIFYqLl~g-~~-~~~~~l~L~~~~~y~yL~~~~~~-------~~~~ 231 (674)
T cd01384 162 FDDYGRISGAAIRTYLLERSRVCQ-ISDPERNYHCFYQLCAA-PP-EDVKKYKLGDPKEFHYLNQSNCF-------ELDG 231 (674)
T ss_pred ECCCCcEEEEEEEEEecccCceee-cCCCCCchhHHHHHHcC-CH-HHHHHcCCCChHhCccccCCCCc-------cccc
Confidence 999999999999999999999995 99999999999999999 54 56788999999999999976432 3567
Q ss_pred CccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC-CcccccCC
Q psy9090 427 DTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA-ENTAELAN 480 (488)
Q Consensus 427 ~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~-~~~~~~~~ 480 (488)
.+|+++|+++++||+.|||+++|+..||+|||||||||||+|.+.+ .+++.+.+
T Consensus 232 ~~D~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGni~F~~~~~~~~~~~~~ 286 (674)
T cd01384 232 VDDAEEYLATRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKD 286 (674)
T ss_pred cchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceeeeccCCCCcccccC
Confidence 8899999999999999999999999999999999999999998664 35555544
No 12
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=1.7e-76 Score=636.43 Aligned_cols=282 Identities=26% Similarity=0.374 Sum_probs=253.2
Q ss_pred hhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHHH
Q psy9090 193 VEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDMM 272 (488)
Q Consensus 193 v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~~ 272 (488)
++|+..+..++|+.++++|+.||..+.+|||+|+++++|||++.+++|.++++..|.++...+.|||+|+||+.||+.|+
T Consensus 2 v~Dl~~L~~l~E~~il~~L~~Ry~~~~IYT~~G~iLIavNPyk~l~iY~~~~~~~y~~~~~~~~pPHifaiA~~Ay~~m~ 81 (767)
T cd01386 2 VEDLASLVYLNESSVLHTLRQRYAANLIHTCAGPDLLVLNPMAPLALYSEKVPSMFRGCKAEDMPPHIYSLAQTAYRALL 81 (767)
T ss_pred cchhhcCCCCCHHHHHHHHHHHHcCCCCeEeECCeEEEECCCCCCCCCCHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred hcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCC---chhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECC
Q psy9090 273 HHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGA---AKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGS 349 (488)
Q Consensus 273 ~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~---~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~ 349 (488)
+.+++|+|+|||||||||||++|.||+|++..+.+. .+ .+.|..+||+|||||||||+|||||||||||++|+|+.
T Consensus 82 ~~~~~QsIiiSGESGAGKTe~tK~i~~yla~~~~~~~~~~~-~e~i~~~npiLEAFGNAkT~rNdNSSRFGK~i~l~F~~ 160 (767)
T cd01386 82 ETRRDQSIIFLGRSGAGKTTSCKHALEYLALAAGSVDGRVS-VEKVRALFTILEAFGNVSTALNGNATRFTQILSLDFDQ 160 (767)
T ss_pred HcCCCceEEEecCCCCCcHHHHHHHHHHHHhccCCCCcccH-HHHHHhhchHHHHhhccCcCCCCCcCcceeEEEEEECC
Confidence 999999999999999999999999999999886432 23 46899999999999999999999999999999999999
Q ss_pred CCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCcc
Q psy9090 350 SGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDTN 429 (488)
Q Consensus 350 ~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~d 429 (488)
.|.|+||+|++|||||||||. |.+||||||||||||+|++. ++++.++|.++..+.+++.... ...+++.+|
T Consensus 161 ~g~i~Ga~i~~yLLEKSRVv~-q~~gERNFHIFYqLlaG~~~-~~~~~l~L~~~~~~~~~~~~~~------~~~~d~~~D 232 (767)
T cd01386 161 TGQIASASLQTMLLERSRVAR-RPNGETNFVVFSQLLAGVDG-DLRTELHLEQMAESSSFGMGGL------SKPEDKQKA 232 (767)
T ss_pred CCcEeEEEEEEEecccCceee-cCCCCCcchhHHHHHhCCCH-HHHHHhcCCCccccchhhcCCC------CCCcCcccH
Confidence 999999999999999999995 99999999999999999976 6678888887655433332211 112567889
Q ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCcccccCChhhh
Q psy9090 430 VAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAENTAELANPEVA 484 (488)
Q Consensus 430 ~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~~~~~~~~~~~ 484 (488)
+++|++|++||+.|||+++|+..||+|||||||||||+|.+ ..+.+.+.+++.+
T Consensus 233 ~~~f~~~~~Al~~lGfs~~e~~~If~iLaaILhLGNi~f~~-~~~~~~~~~~~~~ 286 (767)
T cd01386 233 AIDFSRLQQAMEVLGISEGEQRAIWRVLAAIYHLGAAGATK-VAGRKQFARPEWA 286 (767)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceeee-cCCccccCCHHHH
Confidence 99999999999999999999999999999999999999976 3455677776544
No 13
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=2e-76 Score=631.13 Aligned_cols=284 Identities=27% Similarity=0.464 Sum_probs=261.4
Q ss_pred hhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHH
Q psy9090 192 HVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDM 271 (488)
Q Consensus 192 ~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~ 271 (488)
.++|+..+..++++.+++.|+.||..+.+||++|+++++|||++.+++|.++.+..|.++...+.|||+|+||++||+.|
T Consensus 2 gv~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~ly~~~~~~~Y~~~~~~~~~PHifavA~~Ay~~m 81 (677)
T cd01387 2 GVEDMTQLEDLQETTVLWNLKLRFERNLIYTYIGSILVSVNPYKMFPIYGPEQVQQYAGRALGENPPHLFAIANLAFAKM 81 (677)
T ss_pred CcchhhhCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred HhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCC-CchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECCC
Q psy9090 272 MHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQG-AAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGSS 350 (488)
Q Consensus 272 ~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g-~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~~ 350 (488)
.+.+++|+|+|||||||||||++|.+|+|++..+.| ...+++.|.++||+|||||||||+|||||||||||++|+| .+
T Consensus 82 ~~~~~~QsIiisGESGaGKTe~~k~il~yl~~~~~~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRfGk~~~l~f-~~ 160 (677)
T cd01387 82 LDAKQNQCVIISGESGSGKTEATKLILRYLAAMNQGGSAVITEQILEATPLLEAFGNAKTVRNDNSSRFGKFVEIFL-EG 160 (677)
T ss_pred HhcCCCceEEEEcCCCCCeehHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHhCcCCCCCCCccccceEEEEEe-cC
Confidence 999999999999999999999999999999988654 4678999999999999999999999999999999999999 47
Q ss_pred CceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCccH
Q psy9090 351 GKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDTNV 430 (488)
Q Consensus 351 ~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~d~ 430 (488)
|.|+||+|.+|||||||||. |.+||||||||||||+|+++ ++++.+.|.++..|+||+++.+. ..++.+|+
T Consensus 161 g~i~Ga~i~~yLLEksRvv~-q~~gErnfHIFYqll~g~~~-~~~~~~~L~~~~~y~yL~~~~~~-------~~~~~~d~ 231 (677)
T cd01387 161 GVIVGAITSQYLLEKSRIVF-QAKNERNYHIFYELLAGLPA-QLRQAFSLQEAETYYYLNQGGNC-------EIAGKSDA 231 (677)
T ss_pred CcEeEEEEEEEecCCCceee-cCCCCchHHHHHHHHhCCCH-HHHHHhcCCCHHhCchhcCCCcc-------cCCCcCHH
Confidence 99999999999999999995 99999999999999999977 56788999999999999876432 23567899
Q ss_pred HHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC---CcccccCChhhhc
Q psy9090 431 AKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA---ENTAELANPEVAA 485 (488)
Q Consensus 431 ~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~---~~~~~~~~~~~~~ 485 (488)
++|+++++||+.|||+++|+..||+|||||||||||+|.+.+ .+.+++.+++.++
T Consensus 232 ~~f~~~~~al~~lg~~~~e~~~i~~iLaaILhLGni~F~~~~~~~~~~~~~~~~~~l~ 289 (677)
T cd01387 232 DDFRRLLAAMEVLGFSSEDQDSIFRILASILHLGNVYFEKRETDAQEVASVVSAREIQ 289 (677)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCeEEeeccCCCCcccccCCHHHHH
Confidence 999999999999999999999999999999999999998654 2346677765443
No 14
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=4.9e-76 Score=631.79 Aligned_cols=287 Identities=27% Similarity=0.428 Sum_probs=261.8
Q ss_pred hhhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCC-CCCchhhhhccCCCCCCCChhhHHHHHHHHH
Q psy9090 191 MHVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLN-LYGTKYHFKYKFKSRSDNEPHIYAVADSAYQ 269 (488)
Q Consensus 191 ~~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~-i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~ 269 (488)
..++|+..+..++++.++++|+.||..+.+||++|+++++|||++.++ +|.++++..|.++.....|||+|++|++||+
T Consensus 4 ~~v~Dl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~~lY~~~~~~~y~~~~~~~~~PHifaiA~~Ay~ 83 (717)
T cd01382 4 KDVEDNCSLMYLNEATLLNNIRVRYSKDKIYTYVANILIAVNPYFDIPKLYSSDTIKKYQGKSLGTLPPHVFAIADKAYR 83 (717)
T ss_pred CCcchhhcCCCCCHHHHHHHHHHHHcCCCCEEeECCEEEEECCCCcccccCCHHHHHHhhCCCcCcCCCcHHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999997 9999999999999888999999999999999
Q ss_pred HHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECC
Q psy9090 270 DMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGS 349 (488)
Q Consensus 270 ~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~ 349 (488)
.|.+.+++|+|+|||||||||||++|.||+|++..+.+..++++.|..+||+|||||||||+|||||||||||++|+|+.
T Consensus 84 ~m~~~~~~QsIiisGESGaGKTes~K~il~yLa~~~~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRFGK~~~l~f~~ 163 (717)
T cd01382 84 DMKVLKMSQSIIVSGESGAGKTENTKFVLRYLTESYGSGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNE 163 (717)
T ss_pred HHHhcCCCCeEEEecCCCCChhHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHhhccccCCCCCcccceeEEEEEECC
Confidence 99999999999999999999999999999999988777788999999999999999999999999999999999999999
Q ss_pred CCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCC-------------
Q psy9090 350 SGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDD------------- 416 (488)
Q Consensus 350 ~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~------------- 416 (488)
.|.|+||+|.+|||||||||. |.+||||||||||||+|+++ ++++.+.|.++..|+||+++....
T Consensus 164 ~g~i~Ga~i~~yLLEksRVv~-~~~gErNfHIFYqLl~G~~~-~~~~~l~L~~~~~y~yL~~~~~~~~~~~~~~~~~~~~ 241 (717)
T cd01382 164 KNSVVGGFVSHYLLEKSRICV-QSAEERNYHIFYRLCAGASE-DIREKLHLSSPDDFRYLNRGCTRYFANKETDKQILQN 241 (717)
T ss_pred CCCEeEEEEEEEeccCCceEe-cCCCCCchHHHHHHHhCCCH-HHHHHhcCCChhhCeeecCCccccccccccccccccc
Confidence 999999999999999999995 99999999999999999976 578889999999999999753210
Q ss_pred ------CCCCCCCCCCCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC--CcccccC
Q psy9090 417 ------KLPKGPRETPDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA--ENTAELA 479 (488)
Q Consensus 417 ------~~~~~~~~~~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~--~~~~~~~ 479 (488)
....+...++.+|+++|++|++||+.|||+++|+..||+|||||||||||+|.+.+ ++.+.+.
T Consensus 242 ~~s~~~~~~~~~~~~~~dD~~~f~~~~~Al~~lg~s~~e~~~i~~iLaaILhLGni~F~~~~~~~~~~~~~ 312 (717)
T cd01382 242 RKSPEHLKKGALKDPLLDDYGDFQRMCVALKKIGLDDTEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNVK 312 (717)
T ss_pred ccccccccccccCCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCceeEeccCCCCCcceec
Confidence 00011234678999999999999999999999999999999999999999998654 3344443
No 15
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=9e-76 Score=622.91 Aligned_cols=289 Identities=36% Similarity=0.575 Sum_probs=260.6
Q ss_pred hhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHHH
Q psy9090 193 VEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDMM 272 (488)
Q Consensus 193 v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~~ 272 (488)
++|+..+..++|+.++++|+.||..+.+||++|+++++|||++.+++|.++.+..|.++.....|||+|++|+.||+.|.
T Consensus 2 ~~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay~~m~ 81 (653)
T cd01379 2 MDDLATLEVLDEDTIVEQLQKRYETNQIYTYVGDILIAVNPFQQLGLYTTQHSRLYTGQKRSSNPPHIFAIADAAYQSLV 81 (653)
T ss_pred cchhhcCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCCHHHHHhhcCCCCCCCCCcHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred hcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCC-CchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECCCC
Q psy9090 273 HHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQG-AAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGSSG 351 (488)
Q Consensus 273 ~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g-~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~~~ 351 (488)
+..++|+|+|||||||||||++|.+|+|++..+.+ ..++++.|..+||+|||||||||+|||||||||||++|+|+.+|
T Consensus 82 ~~~~~QsIiisGESGsGKTet~K~l~~yL~~~~~~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRFGK~i~l~f~~~g 161 (653)
T cd01379 82 TYNQDQCIVISGESGSGKTESAHLLVQQLTVLGKANNRTLQEKILQVNSLVEAFGNARTGINDNSSRFGKYLEMKFTRSG 161 (653)
T ss_pred hcCCCceEEEecCCCCCchHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHhhccCcCCCCCcccceeEEEEEECCCC
Confidence 99999999999999999999999999999988765 45789999999999999999999999999999999999999999
Q ss_pred ceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCccHH
Q psy9090 352 KLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDTNVA 431 (488)
Q Consensus 352 ~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~d~~ 431 (488)
.|+||+|.+|||||||||. |.+||||||||||||+|++.+++.+.|.|.++..|+||+++.+.. . .+. .+..+|++
T Consensus 162 ~i~Ga~i~~yLLEksRVv~-q~~gERNfHIFYqLl~G~~~~~~~~~~~L~~~~~~~yL~~~~~~~-~-~~~-~~~~~~~~ 237 (653)
T cd01379 162 AVVGARISEYLLEKSRVVH-QAEGEKNFHIFYYIYAGLAEEKKLAEYKLPESKTPRYLQNEATRV-V-QDI-TSNKFYKD 237 (653)
T ss_pred cEEEEEEEEEeccCCceec-cCCCCCceeeHHHHHhCCCHHHHHHhcCCCCccccCccCCCCccc-c-CCC-ccchhHHH
Confidence 9999999999999999995 999999999999999999875555778999999999998764321 0 111 22335688
Q ss_pred HHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC----CcccccCChhhhc
Q psy9090 432 KFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA----ENTAELANPEVAA 485 (488)
Q Consensus 432 ~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~----~~~~~~~~~~~~~ 485 (488)
+|+++++||+.|||+++|++.||+|||||||||||+|++.. .+.+.+.+.+.++
T Consensus 238 ~f~~~~~al~~lg~~~~e~~~I~~iLaaILhLGNi~F~~~~~~~~~~~~~i~~~~~l~ 295 (653)
T cd01379 238 QFEQIEQCFRVIGFTDEEVGSVYRILAAILNLGDIEFGSVASEHQTDKSRVSNVAALE 295 (653)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEeccccCCCcccccCCHHHHH
Confidence 99999999999999999999999999999999999997653 2346677765443
No 16
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=5.1e-75 Score=625.75 Aligned_cols=284 Identities=35% Similarity=0.551 Sum_probs=264.1
Q ss_pred hhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHHH
Q psy9090 193 VEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDMM 272 (488)
Q Consensus 193 v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~~ 272 (488)
++|+..+..++++.+++.|+.||..+.+||++|+++++|||++.+++|.++.+..|.++.....|||+|++|++||+.|.
T Consensus 2 ~~Dl~~L~~l~e~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~~y~~~~~~~y~~~~~~~~pPHifavA~~Ay~~m~ 81 (679)
T cd00124 2 VDDLASLPHLNEATVLNNLRQRYKKDLIYTYAGPILIAVNPYKDLPNYGPETIRKYRGKSRSELPPHVFAIADRAYRNML 81 (679)
T ss_pred CcchhhCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCCHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred hcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCC-CchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECCCC
Q psy9090 273 HHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQG-AAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGSSG 351 (488)
Q Consensus 273 ~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g-~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~~~ 351 (488)
..+++|+|+|||||||||||++|.+|+|++..+.+ ...+++.|..++|+|||||||||++||||||||||++|+|+..|
T Consensus 82 ~~~~~QsIiisGESGaGKTe~~k~il~yl~~~~~~~~~~i~~~i~~~n~iLEaFGNAkT~~N~NSSRfGk~~~l~f~~~g 161 (679)
T cd00124 82 RDRRNQSIIISGESGAGKTENTKLIMKYLASLAGSNDTGIEEKILAANPILEAFGNAKTVRNNNSSRFGKFIELQFDETG 161 (679)
T ss_pred hcCCCceEEEecCCCCCchHHHHHHHHHHHhccCCCcchHHHHHHHHhHHHHHhcccccCCCCCcccceeEEEEEECCCC
Confidence 99999999999999999999999999999998876 56799999999999999999999999999999999999999999
Q ss_pred ceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCccHH
Q psy9090 352 KLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDTNVA 431 (488)
Q Consensus 352 ~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~d~~ 431 (488)
.|+||+|.+|||||||||. |.+||||||||||||+|+++ ++++.++|.++..|+||+++.+. ..++.+|++
T Consensus 162 ~i~ga~i~~yLLEksRv~~-~~~gErnfHIFYqll~g~~~-~~~~~l~L~~~~~y~yL~~~~~~-------~~~~~~d~~ 232 (679)
T cd00124 162 KISGAKITTYLLEKSRVVS-QEPGERNFHIFYQLLAGASP-EERKKLGLKRPESYRYLNQGGCN-------DVDGIDDAE 232 (679)
T ss_pred cEeEEEEEEEEcccceeec-cCCCCCchhHHHHHHcCCCH-HHHHhcCCCCcccCeeeCCCCcc-------cCCCCCHHH
Confidence 9999999999999999995 99999999999999999966 67888999999999999877432 236788999
Q ss_pred HHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCcc---cccCChhhhc
Q psy9090 432 KFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAENT---AELANPEVAA 485 (488)
Q Consensus 432 ~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~~---~~~~~~~~~~ 485 (488)
+|+++++||+.|||+++|+..||+|||||||||||+|.+.+++. +.+.+.+.++
T Consensus 233 ~f~~~~~al~~lg~~~~e~~~i~~iLaaILhLGni~f~~~~~~~~~~~~~~~~~~l~ 289 (679)
T cd00124 233 EFEELKEALKSLGFSEEEIESIFRILAAILHLGNIEFKSVGGEGQEAAEVKNTEVLS 289 (679)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCeeEEecCCCCcceeecCCHHHHH
Confidence 99999999999999999999999999999999999998765433 5676666544
No 17
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=9.1e-75 Score=621.96 Aligned_cols=285 Identities=31% Similarity=0.486 Sum_probs=263.7
Q ss_pred hhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHH
Q psy9090 192 HVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDM 271 (488)
Q Consensus 192 ~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~ 271 (488)
.++|+..+..++++.+++.|+.||..+.+||++|+++++|||++.+++|.++++..|..+.....|||+|++|++||+.|
T Consensus 7 ~~~Dl~~L~~l~e~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~y~~~~~~~y~~~~~~~~~PHifavA~~Ay~~m 86 (677)
T smart00242 7 GVEDLVLLTYLNEPAVLHNLKKRYLKDLIYTYIGLVLVAVNPYKQLPIYTDEVIKKYRGKSRGELPPHVFAIADNAYRNM 86 (677)
T ss_pred CcchhhcCCCCCHHHHHHHHHHHHhhCCccccccceEEEecCCccCCCCCHHHHHHccCCCCCCCCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCC---CchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEEC
Q psy9090 272 MHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQG---AAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFG 348 (488)
Q Consensus 272 ~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g---~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~ 348 (488)
.+.+++|+|+|||||||||||++|.+|+|++..+.+ ..++++.|..++|+|||||||||++||||||||||++|+|+
T Consensus 87 ~~~~~~QsIiisGESGaGKTe~~k~il~yl~~~~~~~~~~~~i~~~i~~~n~iLEAFGNAkT~~N~NSSRfgk~~~l~f~ 166 (677)
T smart00242 87 LNDKENQSIIISGESGAGKTENTKKIMQYLAAVSGSNTSVGSVEDQILESNPILEAFGNAKTVRNNNSSRFGKFIEIHFD 166 (677)
T ss_pred HhcCCCceEEEecCCCCcchHHHHHHHHHHHhhcCCCCccccHHHHHHHHHHHHHHhhccccCCCCCccchheeEEEEEC
Confidence 999999999999999999999999999999998765 46799999999999999999999999999999999999999
Q ss_pred CCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCCc
Q psy9090 349 SSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPDT 428 (488)
Q Consensus 349 ~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 428 (488)
..|.|.||+|.+|||||||||. |.+||||||||||||+|+++ ++++.+.|.++..|+||+++.+ ...++.+
T Consensus 167 ~~g~i~ga~i~~yLLEksRv~~-~~~gErnfHIFYqLl~g~~~-~~~~~l~L~~~~~y~yL~~~~~-------~~~~~~~ 237 (677)
T smart00242 167 AKGKIVGAKIETYLLEKSRVVS-QAKGERNYHIFYQLLAGASE-ELKKELGLKSPEDYRYLNQGGC-------LSVDGID 237 (677)
T ss_pred CCCcEeEEEEEEeecCCceEEe-cCCCCCchHHHHHHHcCCCH-HHHHhcCCCChhhCceeCCCCC-------ccCCCCC
Confidence 9999999999999999999995 99999999999999999976 6778899999999999987632 2356778
Q ss_pred cHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCcccc--cCChhhhc
Q psy9090 429 NVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAENTAE--LANPEVAA 485 (488)
Q Consensus 429 d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~~~~--~~~~~~~~ 485 (488)
|+++|+++++||+.|||+++|+..||+|||||||||||+|.+.+++++. +.+.+.++
T Consensus 238 d~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGni~F~~~~~~~~~~~~~~~~~l~ 296 (677)
T smart00242 238 DAEEFKETLNAMRVLGFSEEEQESIFKILAAILHLGNIEFEEGRNDNAASTVKDKEELE 296 (677)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEEecCCCCcccccCCHHHHH
Confidence 9999999999999999999999999999999999999999876644432 55555443
No 18
>KOG0163|consensus
Probab=100.00 E-value=2e-75 Score=586.82 Aligned_cols=289 Identities=27% Similarity=0.435 Sum_probs=263.9
Q ss_pred hhhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCC-CCCchhhhhccCCCCCCCChhhHHHHHHHHH
Q psy9090 191 MHVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLN-LYGTKYHFKYKFKSRSDNEPHIYAVADSAYQ 269 (488)
Q Consensus 191 ~~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~-i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~ 269 (488)
.+++|-..+..+++..++.+++-||..+.+||||.+|+++|||+...+ +|.++.+..|.+++....|||+|+|||++|+
T Consensus 57 k~veDNC~Lm~LNEATlL~Nik~RY~k~kIYtYVANILIavNPY~~I~~lYs~etIK~Y~GkSLGq~~PHvFAIADKa~R 136 (1259)
T KOG0163|consen 57 KDVEDNCELMHLNEATLLNNIKLRYYKDKIYTYVANILIAVNPYQEIDGLYSPETIKEYRGKSLGQLPPHVFAIADKAYR 136 (1259)
T ss_pred cccccccceeeccHHHHhhhhhhhhccCchhhhhhhhheeccchhhcccccCHHHHHHhcCCcccCCCCceeeechHHHH
Confidence 367788888999999999999999999999999999999999999986 8999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEECC
Q psy9090 270 DMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTFGS 349 (488)
Q Consensus 270 ~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~~~ 349 (488)
.|+..+..|+|++||||||||||++|.+++|++.+-+....++..|+.+||+|||||||||+||+||||||||++|||+.
T Consensus 137 dMr~~k~SQSIIVSGESGAGKTEstK~vLrYLces~gsag~Iq~rileaNPiLEAFGNAKT~RNNNSSRFGKFveiHf~d 216 (1259)
T KOG0163|consen 137 DMRVYKLSQSIIVSGESGAGKTESTKAVLRYLCESWGSAGPIQTRILEANPILEAFGNAKTLRNNNSSRFGKFVEIHFDD 216 (1259)
T ss_pred HHHHHhhcccEEEecCCCCCcchhHHHHHHHHHhccCCCCcHHHHHhccChHHHHhccchhhccCChhhccceEEEEEcC
Confidence 99999999999999999999999999999999988776778999999999999999999999999999999999999999
Q ss_pred CCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCcc--------C-----C
Q psy9090 350 SGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVT--------D-----D 416 (488)
Q Consensus 350 ~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~--------~-----~ 416 (488)
+|.++||-|++||||||||+. |..+|||||||||||||+++ ++++++.|+.|++|+||+.+.+ . +
T Consensus 217 k~~VvGGyvSHYLLEkSRiC~-Qaa~ERNYHiFY~LiAGas~-dl~~kL~L~~pd~f~YL~rG~t~yFan~~t~~ki~~n 294 (1259)
T KOG0163|consen 217 KGQVVGGYVSHYLLEKSRICR-QAAEERNYHIFYQLIAGASP-DLRKKLSLGKPDDFRYLKRGCTQYFANAKTEQKIPGN 294 (1259)
T ss_pred CCceechhhhHHHHHHhHHHH-hhhcccchhHHHHHHcCCCH-HHHHHhccCCchhhhHHhcchhhhccCcchhhcCccc
Confidence 999999999999999999996 99999999999999999987 7889999999999999984411 0 1
Q ss_pred CCC------CCCCCCCCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC---CcccccCCh
Q psy9090 417 KLP------KGPRETPDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA---ENTAELANP 481 (488)
Q Consensus 417 ~~~------~~~~~~~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~---~~~~~~~~~ 481 (488)
..+ +..+++-+||-.+|..+..||..+|.|++|+..||++||||||||||+|++.. .++|.+.+.
T Consensus 295 r~S~~~~~~~~~kD~iidD~~dF~rl~~Al~~~Glsd~Ekl~i~s~vA~vLHLGNieFEE~~ddsrGGC~v~n~ 368 (1259)
T KOG0163|consen 295 RKSKNHQQKGSLKDPIIDDYQDFHRLEKALKLLGLSDTEKLFIWSTVAAVLHLGNIEFEEIPDDSRGGCQVSNG 368 (1259)
T ss_pred ccCccccccCcccCcccccHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHccccchhcccCcCCCceecccC
Confidence 110 22345566999999999999999999999999999999999999999998665 556776654
No 19
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=6.3e-72 Score=608.56 Aligned_cols=284 Identities=34% Similarity=0.551 Sum_probs=247.6
Q ss_pred hhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHHH
Q psy9090 193 VEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDMM 272 (488)
Q Consensus 193 v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~~ 272 (488)
++|+..+..++|+.+++.|+.||..+.+||++|+++++|||++.+++|.++.+..|.++.....|||+|++|++||+.|.
T Consensus 1 veDl~~l~~l~e~~il~~L~~R~~~~~iyT~~G~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHif~~a~~A~~~m~ 80 (689)
T PF00063_consen 1 VEDLASLSHLNEASILHNLRQRYKKDLIYTYIGPILIAVNPYKPLPLYSDEVMEKYRGKRRQDLPPHIFAVAQRAYRQML 80 (689)
T ss_dssp -SBGGGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--STSSHHHHHHHTTS-GGGS-SSHHHHHHHHHHHHH
T ss_pred CChhhhCCCCCHHHHHHHHHHHHccCCccccCCCeEEEECCchhhhhhhhhhhhhhhhhccccccCccchhhhccccccc
Confidence 57899999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred hcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCc-----hhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEE
Q psy9090 273 HHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAA-----KVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTF 347 (488)
Q Consensus 273 ~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~-----~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~ 347 (488)
..+++|+|||||||||||||++|.||+|++..+.+.. ++++.|..+++||||||||||++|+||||||||++|+|
T Consensus 81 ~~~~~Q~IiisGeSGsGKTe~~k~il~~L~~~~~~~~~~~~~~i~~~i~~~~~iLeaFGnAkT~~N~nSSRfgk~~~l~f 160 (689)
T PF00063_consen 81 RTRQNQSIIISGESGSGKTETSKLILRYLASLSSSSSSSKSSSIEKKILAANPILEAFGNAKTPRNDNSSRFGKFIELQF 160 (689)
T ss_dssp HHTSEEEEEEEESTTSSHHHHHHHHHHHHHHHSSSSSSTCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEE
T ss_pred ccccccceeeccccccccccchHHHHHHHhhhcccccccccccccceEEeccchhhhhcccccccCCcccccceEEEEEe
Confidence 9999999999999999999999999999999877654 79999999999999999999999999999999999999
Q ss_pred CCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCC
Q psy9090 348 GSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPD 427 (488)
Q Consensus 348 ~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~ 427 (488)
+..|.++||+|.+|||||||||. |.+||||||||||||+|++. ++++.+.|.++..|+||+++.+ ...++.
T Consensus 161 ~~~~~~~g~~i~~ylLEksRv~~-~~~~ErnfhiFYqll~G~~~-~~~~~l~L~~~~~~~yL~~~~~-------~~~~~~ 231 (689)
T PF00063_consen 161 DDSGQIVGAKIETYLLEKSRVVR-QPPGERNFHIFYQLLAGADD-EERKELRLNDASDYRYLNQSGC-------STIPGI 231 (689)
T ss_dssp ETTSSEEEEEEEEEEE-GGGGT----TTS-SBHHHHHHHHTSSH-HHHHHTT-S-GGGSTTCCTTSS-------SSBTTC
T ss_pred cccccccccceecccccccceee-ccccccccchhhhhhhccch-hhhhcccccccccccceecccc-------cccCCc
Confidence 99999999999999999999995 99999999999999999987 4588899999999999987532 224567
Q ss_pred ccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC-CcccccCChhhhc
Q psy9090 428 TNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA-ENTAELANPEVAA 485 (488)
Q Consensus 428 ~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~-~~~~~~~~~~~~~ 485 (488)
+|+++|+++++||+.|||+++++..||+|||||||||||+|++.. ++.+++.+++.++
T Consensus 232 ~d~~~f~~l~~al~~lg~~~~e~~~I~~iLaaILhLGni~F~~~~~~~~~~~~~~~~l~ 290 (689)
T PF00063_consen 232 DDAEEFQELKDALKTLGFSDEEIDDIFRILAAILHLGNIEFVEDESDESAEVENSEELQ 290 (689)
T ss_dssp THHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTTSSEEEETTSSSEEESTSHHHH
T ss_pred cCHHHhhhhhhhhccccCchhHHHHHHHHHHHHhhhccccccccccccceeechHHHHH
Confidence 899999999999999999999999999999999999999998776 5567788877554
No 20
>KOG0161|consensus
Probab=100.00 E-value=5.7e-72 Score=630.14 Aligned_cols=284 Identities=31% Similarity=0.503 Sum_probs=269.0
Q ss_pred hhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChhhHHHHHHHHHHH
Q psy9090 192 HVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPHIYAVADSAYQDM 271 (488)
Q Consensus 192 ~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~~~ 271 (488)
.++||+.+..+++++++.+|+.||.+..||||.|..++.|||++.+|||.++++.+|.++.+.++|||+|+|+|.||++|
T Consensus 83 k~eDMa~LT~lNeasVL~nL~~RY~~~lIyTYSGLFcVviNPyk~lpiYt~~v~~~ykgkrr~e~pPHIfavad~AYr~m 162 (1930)
T KOG0161|consen 83 KVEDMAELTFLNEASVLHNLKQRYASDLIYTYSGLFCVVINPYKRLPIYTESVVRMYKGKKREEMPPHIFAVADEAYRNM 162 (1930)
T ss_pred ccccHHHhcccChHHHHhhHHHHHHhChHHHcccceeEEecCCcCCCCCCHHHHHHhcccccccCCchHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCC-------chhhhHhhhcchhhhhhhccccCCCCCCCccceeEE
Q psy9090 272 MHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGA-------AKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQ 344 (488)
Q Consensus 272 ~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~-------~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~ 344 (488)
...+++|+|||+|||||||||+||.+|+|++..+.+. ...+++|...||+|||||||+|++|||||||||||+
T Consensus 163 L~~renQSiLiTGESGAGKTeNTKkVIqyla~va~~~~~~~~~~~~le~qi~q~npvLeaFGNa~tvrn~NssRFgkfir 242 (1930)
T KOG0161|consen 163 LQDRENQSILITGESGAGKTENTKKVIQYLASVASSSTKKVKIEGTLEDQILQANPVLEAFGNAKTVRNDNSSRFGKFIR 242 (1930)
T ss_pred HhcCCCceEeeecCCCCCcchhHHHHHHHHHHHhhccccCCCCCCChHHHHHHhCchHHHhcChhhhcCCCCcccceeEE
Confidence 9999999999999999999999999999999987654 678999999999999999999999999999999999
Q ss_pred EEECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCC-CCCCcccccCccCCCCCCCCC
Q psy9090 345 VTFGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSP-GRKYRYLRADVTDDKLPKGPR 423 (488)
Q Consensus 345 ~~~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~-~~~~~yl~~~~~~~~~~~~~~ 423 (488)
|+|+..|.|+||.|.+||||||||++ |+++||||||||||++|.++ .++..++|.. +.+|.|+.++.. .
T Consensus 243 I~F~~~G~i~~a~Ie~yLLEKsRv~~-Q~~~Er~yhiFyqlls~~~~-~l~~~l~L~~~~~~Y~f~~~~~~--------~ 312 (1930)
T KOG0161|consen 243 IHFDATGKIAGADIETYLLEKSRVIR-QAPGERNYHIFYQLLSGADP-ELKEELLLSDNVKDYKFLSNGES--------T 312 (1930)
T ss_pred EecCCCCccchhhHHHHHHHHhHhhc-cCcchhHHHHHHHHHhCCCH-HHHHHHhhcccchhhhhhccccC--------C
Confidence 99999999999999999999999995 99999999999999999965 6677777765 899999977632 3
Q ss_pred CCCCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeec-CCcccccCChhhhc
Q psy9090 424 ETPDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESS-AENTAELANPEVAA 485 (488)
Q Consensus 424 ~~~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~-~~~~~~~~~~~~~~ 485 (488)
.++++|+++|+.|..||++|||+++|+.+||+|+|||||||||.|.+. .++++++.+.++|+
T Consensus 313 i~g~dd~eef~~t~~a~~ilgfs~~E~~~~~~i~sailhlGn~~f~~~~~~~qa~~~~~~~a~ 375 (1930)
T KOG0161|consen 313 IPGVDDAEEFQETDEAMDILGFSEEEKISIFRIVSAILHLGNIKFKQEPREEQAEFDNTEVAD 375 (1930)
T ss_pred CCCcchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcchhhhccccccccCCCCchHHH
Confidence 789999999999999999999999999999999999999999999876 48999999998886
No 21
>KOG0160|consensus
Probab=100.00 E-value=5.6e-65 Score=537.09 Aligned_cols=281 Identities=31% Similarity=0.497 Sum_probs=262.5
Q ss_pred hhhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCC-CCCchhhhhccCCCCCCCChhhHHHHHHHHH
Q psy9090 191 MHVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLN-LYGTKYHFKYKFKSRSDNEPHIYAVADSAYQ 269 (488)
Q Consensus 191 ~~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~-i~~~ef~~~~~~~~~~~~~ph~f~~~d~~~~ 269 (488)
..++|+..+..+.++.++.+|..||..+.+||+.|.++++|||+++++ +|.++.+..|. ....+..||+|++++.||+
T Consensus 8 ~~~dDlt~lsyl~epaVL~~L~~Ry~~~~IYty~G~vLiAiNPf~~~~~ly~~~~i~~y~-~~~~~l~ph~favA~~ay~ 86 (862)
T KOG0160|consen 8 MGVDDLTTLSYLHEPAVLHNLAKRYEQNQIYTYKGIVLIAINPFKRLPHLYGKKMISAYQ-AIQGELSPHLFAVAEEAYR 86 (862)
T ss_pred CCccccccCCccCcHHHHHHHHHhhhhcccchhhceeeeeeccccccchhccHHHHHhhc-ccccccCcchhhHHHHHHH
Confidence 477899999999999999999999999999999999999999999999 99999999999 7788899999999999999
Q ss_pred HHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCC--CchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEEE
Q psy9090 270 DMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQG--AAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVTF 347 (488)
Q Consensus 270 ~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g--~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~~ 347 (488)
.|+....+|+|+||||||||||+++|.+|+|++..+.+ .-++|+.|+.+||+|||||||||+|||||||||||++|+|
T Consensus 87 ~m~~~~~~QsIivsGESGAgkT~~aK~~m~yla~v~~~~~~~~vE~~vL~snpi~EafgNakT~rndnsSrFgK~iei~F 166 (862)
T KOG0160|consen 87 DMTPDGVNQSIIVSGESGAGKTETAKYLMEYLASVGGSVEGRSIENKVLASNPILEAFGNAKTTRNDNSSRFGKVIEITF 166 (862)
T ss_pred HhhhccCCceeeeeCCCCCchhHHHHHHHHHHHHHhccchhhHHHHHHHhcCCcchhhccchhhhcccHHHhhhHHHHhh
Confidence 99999999999999999999999999999999999988 6789999999999999999999999999999999999999
Q ss_pred CCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCCCCC
Q psy9090 348 GSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRETPD 427 (488)
Q Consensus 348 ~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~ 427 (488)
+..|.|.||+|.+|||||||||. +.++|||||||||+|+|.+ +++++|.|..+..|+|++++. +....+.
T Consensus 167 d~~~~I~GA~~~TYLLekSRv~~-~~~~ernyhiFyQlca~~~--~~~~~l~L~~~~~f~yl~q~~-------~~~i~~v 236 (862)
T KOG0160|consen 167 DQQGRISGAKIRTYLLEKSRVVQ-LSAPERNYHIFYQLCAGAP--EELEKLKLGTLRRFSYLNQSA-------CVLISGV 236 (862)
T ss_pred hhhcccccceeeeEEeecceeee-cCccccchHHHHHHhcCCc--hhhhccCcCccccceeccccc-------chhhccc
Confidence 99999999999999999999995 9999999999999999976 567889999999999999874 3346788
Q ss_pred ccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecCCcccccCChh
Q psy9090 428 TNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSAENTAELANPE 482 (488)
Q Consensus 428 ~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~~~~~~~~~~~ 482 (488)
+|+++|..++.||..+|++.++++.||+++||+||||||+|....++++...-.+
T Consensus 237 ~d~~e~~~t~~A~~~vgi~~~~q~~if~lla~ilhlGni~f~~~~~~~~~~~~~~ 291 (862)
T KOG0160|consen 237 SDAEEFLSTTEAMLFVGISESHQELIFRLLAAILHLGNIQFSSGVEETSSSPVDD 291 (862)
T ss_pred ccHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhccCceEeecccccccccccch
Confidence 9999999999999999999999999999999999999999987765544443333
No 22
>KOG4229|consensus
Probab=100.00 E-value=2.8e-55 Score=474.73 Aligned_cols=288 Identities=34% Similarity=0.523 Sum_probs=266.9
Q ss_pred hhhhhhhhhhhhccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCC-CCCchhhhhccCCCCCCCChhhHHHHHHH
Q psy9090 189 QTMHVEDLAALETISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLN-LYGTKYHFKYKFKSRSDNEPHIYAVADSA 267 (488)
Q Consensus 189 ~~~~v~dl~~l~~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~-i~~~ef~~~~~~~~~~~~~ph~f~~~d~~ 267 (488)
+...++|+..+..+++..+..++..||....+|+|++.+++++||+...+ +|...|+..|.++...+.+||+|+++|.+
T Consensus 59 ~~~~~~Dl~~l~~l~e~~~~~nl~~R~~~~~Iy~y~gsil~~lnp~~~~~fiy~~~~~~ly~~~~~ge~~phifa~ad~~ 138 (1062)
T KOG4229|consen 59 QVEDVEDLAQLEDLSEATILENLLVRYKRNPIYEYLGSILVALNPLQPIPFLYLPRFSKLYSGKPLGEDPPHIFAIADLA 138 (1062)
T ss_pred ccccHHHHhhccccchhhhhHHHHHHHccCCceeeechhhhhcCccccccccccHHhhccccccccCCCCcchhhhhhhH
Confidence 33467899999999999999999999999999999999999999999999 99999999999899999999999999999
Q ss_pred HHHHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhc-CCCchhhhHhhhcchhhhhhhccccCCCCCCCccceeEEEE
Q psy9090 268 YQDMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLG-QGAAKVGEKIEKCVNVIHAIGNAGTPINQNSTRHVLYMQVT 346 (488)
Q Consensus 268 ~~~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~-~g~~~~~e~i~~~~~~leafgna~t~~n~nssrfgk~~~~~ 346 (488)
|..|....++|||+||||||+||||+++.++++++..+ +....+++.|+.++|+|||||||+|.+||||||||||+++.
T Consensus 139 y~~m~~~~~~QcivisGesgsGktest~l~~~~Ls~Lsq~~~~~~e~~il~a~~llEafgnA~t~~ndnssrfgk~i~~~ 218 (1062)
T KOG4229|consen 139 YQDMLREKEDQCIVISGESGSGKTESTKLLWQFLSILSQGNNSPVEQLILSANPLLEAFGNAKTPRNDNSSRFGKYIKVN 218 (1062)
T ss_pred HHhhhhhccceeEEEecccCCCCchhhHHHHHHHHHHhcCCCCchhhhhhcchHHHHHhcccCCcccCchhhhhheEEec
Confidence 99999999999999999999999999999999999999 55677889999999999999999999999999999999999
Q ss_pred ECCCCceeceEEeeeecccceecccCCCCCcchHHHHHHHhhcchhhhhhhccCCCCCCCcccccCccCCCCCCCCCC-C
Q psy9090 347 FGSSGKLSGAIFWLYQLEKWRVTGNRDPLQANFHIFYYFYDAMEAAGELDKYFLSPGRKYRYLRADVTDDKLPKGPRE-T 425 (488)
Q Consensus 347 ~~~~~~~~~~~~~~yllek~rv~~~~~~~ernfHiFY~l~~g~~~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~-~ 425 (488)
|...|.+.||+|..||||||||+. |+++||||||||++++|++. .++..+.|+.+++|.||+++... ++ +
T Consensus 219 ~~~~g~i~Gaki~~yllEKsr~~~-q~~~e~nyhify~~~agl~~-~e~~~~~l~~~e~y~yL~~~~~~-------~~~d 289 (1062)
T KOG4229|consen 219 FRKTGIIEGAKIVEYLLEKSRLVI-QAGGERNYHIFYYLLAGLSE-NELKAFVLGEAENYEYLEQGALF-------TISD 289 (1062)
T ss_pred cccCCCCCcchHHHHHHHHHHHHH-hcCCCcccccchhheeccch-hhhhHHhhcCCCCHHHhhccccc-------cccc
Confidence 999999999999999999999996 99999999999999999988 67888999999999999987432 23 6
Q ss_pred CCccHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhcCceEeecC---CcccccCChhhhc
Q psy9090 426 PDTNVAKFQEIYQNLIDIEFDDIQMEIFSNVLAAILLIGEVEFESSA---ENTAELANPEVAA 485 (488)
Q Consensus 426 ~~~d~~~~~~~~~a~~~lgf~~~~~~~i~~ilaaiLhlGni~F~~~~---~~~~~~~~~~~~~ 485 (488)
+.++.++|+++..||.++||.+++++.||+++|||||+|||.|.+.. .+.+++.+.+.+.
T Consensus 290 ~~~~~~~~~~l~~~m~v~~f~~~~~~si~~~la~il~~gni~~~~~~~~~~d~~~v~~~~~v~ 352 (1062)
T KOG4229|consen 290 GEDDVAQFIRLEAAMSVVGFTDKVLGSIFKSLAAILHIGNISYIKFALDQQDSAEVENEEAVE 352 (1062)
T ss_pred hHHHHHhHHHHHHHHHHhccchhHHHHHHHhcccceeecceeHHhhhcccccchhcccchHHH
Confidence 77899999999999999999999999999999999999999997554 4456676665543
No 23
>KOG0598|consensus
Probab=100.00 E-value=1.2e-39 Score=311.67 Aligned_cols=181 Identities=33% Similarity=0.584 Sum_probs=163.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|..++.|+.+|+.||.|||++|||||||||+|||++.+|+|+|+|||+|+..........+++||+.|||||++..
T Consensus 122 F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~-- 199 (357)
T KOG0598|consen 122 FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLG-- 199 (357)
T ss_pred cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhc--
Confidence 578999999999999999999999999999999999999999999999999977666677788999999999999987
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC----C
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----Y 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----s 156 (488)
.+|+..+|+||||+++|+|++|.+||.+.+.......+.+...+. .+.-++.+++++++++|..||.+|. +
T Consensus 200 ---~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~--~p~~ls~~ardll~~LL~rdp~~RLg~~~d 274 (357)
T KOG0598|consen 200 ---KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPL--PPGYLSEEARDLLKKLLKRDPRQRLGGPGD 274 (357)
T ss_pred ---CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCC--CCccCCHHHHHHHHHHhccCHHHhcCCCCC
Confidence 789999999999999999999999999999888888888775322 2445899999999999999999996 6
Q ss_pred HHHHhcCcCCCCCCCCcccccccccccccchh
Q psy9090 157 MSELLEHPFITSLPENDLHLSTVNCQYKDQEL 188 (488)
Q Consensus 157 ~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~ 188 (488)
+.++.+||||++++|+.+......+++.+...
T Consensus 275 ~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~ 306 (357)
T KOG0598|consen 275 AEEIKRHPFFKGINWEKLLAKKLSPPFKPNVT 306 (357)
T ss_pred hHHhhcCcccccCCHHHHHhcCCCCCeecCCC
Confidence 88999999999999999988888888877543
No 24
>KOG0616|consensus
Probab=100.00 E-value=1.1e-37 Score=288.93 Aligned_cols=174 Identities=29% Similarity=0.565 Sum_probs=158.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|..+++|+.||+.||+|||+++|++|||||+|||++.+|++||+|||+++... ..+.+.||||.|+|||++++
T Consensus 141 F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~---~rT~TlCGTPeYLAPEii~s-- 215 (355)
T KOG0616|consen 141 FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS---GRTWTLCGTPEYLAPEIIQS-- 215 (355)
T ss_pred CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---CcEEEecCCccccChHHhhc--
Confidence 6899999999999999999999999999999999999999999999999998765 34778999999999999987
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
.+|+.++|+|||||++|||+.|.+||.+.++.....+|+... ...|+.+++++++||+++|+.|-.+|.
T Consensus 216 ---k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~---v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlkn 289 (355)
T KOG0616|consen 216 ---KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK---VKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKN 289 (355)
T ss_pred ---CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc---ccCCcccCHHHHHHHHHHHhhhhHhhhcCcCC
Confidence 789999999999999999999999999999988888887753 335678899999999999999999993
Q ss_pred CHHHHhcCcCCCCCCCCccccccccccccc
Q psy9090 156 YMSELLEHPFITSLPENDLHLSTVNCQYKD 185 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~~~~~~~~~~~ 185 (488)
...+|.+||||+++.|..+....+..++.+
T Consensus 290 G~~dIk~H~wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 290 GVEDIKNHPWFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred CccccccCcccccccHHHHhhccccCCCCC
Confidence 568999999999999999888877777766
No 25
>KOG0581|consensus
Probab=100.00 E-value=3.4e-37 Score=294.95 Aligned_cols=167 Identities=35% Similarity=0.730 Sum_probs=149.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++|.....++.+|++||.|||. ++||||||||+|||++..|+|||||||.++..... ...+++||..|||||.+.+
T Consensus 175 i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~a~tfvGT~~YMsPERi~g- 251 (364)
T KOG0581|consen 175 IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--IANTFVGTSAYMSPERISG- 251 (364)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--hcccccccccccChhhhcC-
Confidence 5789999999999999999995 99999999999999999999999999999887654 6678999999999999987
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCC-----ChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDM-----HPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
..|+.++||||||+.+.|+.+|+.||... ...+.+..|+.+++|..+. ..||+++++||..||++||.+|
T Consensus 252 ----~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~-~~fS~ef~~FV~~CL~Kdp~~R 326 (364)
T KOG0581|consen 252 ----ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE-GEFSPEFRSFVSCCLRKDPSER 326 (364)
T ss_pred ----CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc-ccCCHHHHHHHHHHhcCCcccC
Confidence 68999999999999999999999999764 5567777888777776543 2599999999999999999999
Q ss_pred CCHHHHhcCcCCCCCCCCccc
Q psy9090 155 PYMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 155 ps~~ell~hp~f~~~~~~~~~ 175 (488)
||+.++++|||++........
T Consensus 327 ~s~~qLl~Hpfi~~~~~~~vd 347 (364)
T KOG0581|consen 327 PSAKQLLQHPFIKKFEDPNVD 347 (364)
T ss_pred CCHHHHhcCHHHhhccccccc
Confidence 999999999999987655443
No 26
>KOG0615|consensus
Probab=100.00 E-value=5.1e-38 Score=302.76 Aligned_cols=168 Identities=30% Similarity=0.525 Sum_probs=142.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC---CcEEEEecCCccccccccCccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD---GEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~ 77 (488)
+.|...+.+++||+.||.|||++||+||||||+|||+..+ -.+||+|||+|+.... .....+.||||.|.|||++.
T Consensus 273 l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~-~sfm~TlCGTpsYvAPEVl~ 351 (475)
T KOG0615|consen 273 LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE-GSFMKTLCGTPSYVAPEVLA 351 (475)
T ss_pred cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccc-ceehhhhcCCccccChhhee
Confidence 4577889999999999999999999999999999999876 6799999999998764 36678999999999999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHH-HHHHHHhCCCCCC-CCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTR-ALFQIVRNPPPGL-YRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
+... ..+..++|+||+||+||-+++|.+||.+..... ...++.++..... .....+|+++++||.+||..||++||
T Consensus 352 ~kg~--~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~ 429 (475)
T KOG0615|consen 352 SKGV--EYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRP 429 (475)
T ss_pred cCCe--ecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCc
Confidence 7422 334458999999999999999999998766555 6667776654333 12345699999999999999999999
Q ss_pred CHHHHhcCcCCCCCCC
Q psy9090 156 YMSELLEHPFITSLPE 171 (488)
Q Consensus 156 s~~ell~hp~f~~~~~ 171 (488)
|++++|+||||+..+-
T Consensus 430 s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 430 SADEALNHPWFKDAPC 445 (475)
T ss_pred CHHHHhcChhhhcccc
Confidence 9999999999997653
No 27
>KOG0575|consensus
Probab=100.00 E-value=5.2e-37 Score=309.55 Aligned_cols=159 Identities=35% Similarity=0.636 Sum_probs=146.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.+++++++||+.||.|||+++|+|||||..|+|++++.+|||+|||+|........+..+.||||.|+|||++..
T Consensus 115 ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k-- 192 (592)
T KOG0575|consen 115 LTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNK-- 192 (592)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhcc--
Confidence 689999999999999999999999999999999999999999999999999998877788899999999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++..+||||+||++|.||+|+|||....-.+...++.... ...|..+|.++++||.+||++||.+|||++++
T Consensus 193 ---~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~---Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~v 266 (592)
T KOG0575|consen 193 ---SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE---YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEV 266 (592)
T ss_pred ---CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC---cccccccCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 778999999999999999999999999987777766666542 33466899999999999999999999999999
Q ss_pred hcCcCCC
Q psy9090 161 LEHPFIT 167 (488)
Q Consensus 161 l~hp~f~ 167 (488)
|.|+||+
T Consensus 267 L~h~Ff~ 273 (592)
T KOG0575|consen 267 LDHPFFK 273 (592)
T ss_pred hcCHhhh
Confidence 9999994
No 28
>KOG0592|consensus
Probab=100.00 E-value=1.6e-36 Score=301.40 Aligned_cols=171 Identities=27% Similarity=0.514 Sum_probs=149.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-------------CccccccCC
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-------------DKKKTFLGS 67 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-------------~~~~~~~gt 67 (488)
|+|..+++++.||+.||+|||++|||||||||+|||++.+|++||+|||.++.+.+.. ....+++||
T Consensus 171 fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGT 250 (604)
T KOG0592|consen 171 FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGT 250 (604)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeee
Confidence 5788999999999999999999999999999999999999999999999998654221 112568999
Q ss_pred CccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhc
Q psy9090 68 PSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECL 147 (488)
Q Consensus 68 ~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L 147 (488)
..|.+||++.. ...++.+|+|+|||++|+|+.|.+||.+.++.....+|+.- ....+..+++.+++||+++|
T Consensus 251 AeYVSPElL~~-----~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l---~y~fp~~fp~~a~dLv~KLL 322 (604)
T KOG0592|consen 251 AEYVSPELLND-----SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL---DYEFPEGFPEDARDLIKKLL 322 (604)
T ss_pred ecccCHHHhcC-----CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHH
Confidence 99999999986 56788999999999999999999999999977766666653 22346778999999999999
Q ss_pred ccCCCCCCCHHHHhcCcCCCCCCCCccccccc
Q psy9090 148 EKNPEHRPYMSELLEHPFITSLPENDLHLSTV 179 (488)
Q Consensus 148 ~~dP~~Rps~~ell~hp~f~~~~~~~~~~~~~ 179 (488)
..||.+|+|+++|.+||||.+++|+.+...+.
T Consensus 323 v~dp~~Rlt~~qIk~HpFF~~Vdw~nlw~~~P 354 (604)
T KOG0592|consen 323 VRDPSDRLTSQQIKAHPFFEGVDWENLWQQTP 354 (604)
T ss_pred ccCccccccHHHHhhCcccccCChhhhhhcCC
Confidence 99999999999999999999999998655543
No 29
>KOG0694|consensus
Probab=100.00 E-value=9.6e-37 Score=310.96 Aligned_cols=182 Identities=32% Similarity=0.533 Sum_probs=164.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|..++.|++.|+.||+|||++||||||||.+|||+|..|++||+|||+++........+.+++|||.|+|||++.+
T Consensus 465 F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e-- 542 (694)
T KOG0694|consen 465 FSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTE-- 542 (694)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhcc--
Confidence 689999999999999999999999999999999999999999999999999987655578899999999999999987
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY---- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps---- 156 (488)
..|+.++|+|||||++|+|+.|..||.+.+..+....|+.... ..|..+|.++.++|+++|.++|++|+.
T Consensus 543 ---~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~---~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~ 616 (694)
T KOG0694|consen 543 ---QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV---RYPRFLSKEAIAIMRRLLRKNPEKRLGSGER 616 (694)
T ss_pred ---CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC---CCCCcccHHHHHHHHHHhccCcccccCCCCC
Confidence 7899999999999999999999999999998877777765422 246778999999999999999999985
Q ss_pred -HHHHhcCcCCCCCCCCcccccccccccccchhhh
Q psy9090 157 -MSELLEHPFITSLPENDLHLSTVNCQYKDQELQT 190 (488)
Q Consensus 157 -~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~~~ 190 (488)
+.+|..||||++++|+.+....+.++|.+.....
T Consensus 617 d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~ 651 (694)
T KOG0694|consen 617 DAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGP 651 (694)
T ss_pred CchhhhhCCccccCCHHHHhhccCCCCCCcccCCh
Confidence 5889999999999999999999999887754433
No 30
>KOG0033|consensus
Probab=100.00 E-value=1.9e-35 Score=267.14 Aligned_cols=162 Identities=30% Similarity=0.515 Sum_probs=142.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC---CcEEEEecCCccccccccCccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD---GEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~ 77 (488)
.||..+.++++||+++|.|||.+||||||+||+|+|+-+. .-+||+|||++.... .......++|||.|+|||+++
T Consensus 107 ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~g~~~~G~~GtP~fmaPEvvr 185 (355)
T KOG0033|consen 107 YSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-DGEAWHGFAGTPGYLSPEVLK 185 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-CccccccccCCCcccCHHHhh
Confidence 3788999999999999999999999999999999999643 359999999999887 335667789999999999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCC-CCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPP-GLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
. .+|+..+|||+.||+||.|+.|.+||.+.+...+..+|..+... +.+..+.+++++++|+++||..||.+|+|
T Consensus 186 k-----dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt 260 (355)
T KOG0033|consen 186 K-----DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT 260 (355)
T ss_pred c-----CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc
Confidence 6 78999999999999999999999999998877877888765432 11234567999999999999999999999
Q ss_pred HHHHhcCcCCCC
Q psy9090 157 MSELLEHPFITS 168 (488)
Q Consensus 157 ~~ell~hp~f~~ 168 (488)
+.++|+|||+++
T Consensus 261 a~EAL~HpWi~~ 272 (355)
T KOG0033|consen 261 ADEALKHPWICN 272 (355)
T ss_pred HHHHhCCchhcc
Confidence 999999999986
No 31
>KOG0578|consensus
Probab=100.00 E-value=2.4e-35 Score=295.32 Aligned_cols=163 Identities=42% Similarity=0.809 Sum_probs=155.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.+|+.|++++++||+|||.+||+|||||.+|||++.+|.+||+|||+|..+........+.+|||+|||||++..
T Consensus 366 ~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtr-- 443 (550)
T KOG0578|consen 366 MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTR-- 443 (550)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhh--
Confidence 689999999999999999999999999999999999999999999999999988877677888999999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..|++++||||||+++.||+-|.+||-..++...++.+..+..|.+..+..+|+.+++|+.+||..||.+|+++.+|
T Consensus 444 ---k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eL 520 (550)
T KOG0578|consen 444 ---KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKEL 520 (550)
T ss_pred ---cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHH
Confidence 78999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred hcCcCCCC
Q psy9090 161 LEHPFITS 168 (488)
Q Consensus 161 l~hp~f~~ 168 (488)
|+||||+.
T Consensus 521 L~HpFl~~ 528 (550)
T KOG0578|consen 521 LEHPFLKM 528 (550)
T ss_pred hcChhhhh
Confidence 99999954
No 32
>KOG0605|consensus
Probab=100.00 E-value=6.8e-35 Score=289.99 Aligned_cols=172 Identities=28% Similarity=0.499 Sum_probs=146.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccc-----------------------c
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETAN-----------------------T 57 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~-----------------------~ 57 (488)
|+|+++++|+.+++.||..+|+.|+|||||||+|+||+..|++||+|||+|+.... .
T Consensus 238 L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (550)
T KOG0605|consen 238 LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSD 317 (550)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCcc
Confidence 68999999999999999999999999999999999999999999999999863210 0
Q ss_pred cC------------------------ccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC
Q psy9090 58 FD------------------------KKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH 113 (488)
Q Consensus 58 ~~------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~ 113 (488)
.. .....+|||.|+|||++.+ .+|+..||+||||||+||||.|.+||.+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-----kgY~~~cDwWSLG~ImyEmLvGyPPF~s~t 392 (550)
T KOG0605|consen 318 FPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-----KGYGKECDWWSLGCIMYEMLVGYPPFCSET 392 (550)
T ss_pred ccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-----CCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 00 0123589999999999997 779999999999999999999999999999
Q ss_pred hHHHHHHHHhCC-CCCCCCCCCcCHHHHHHHHHhcccCCCCCC---CHHHHhcCcCCCCCCCCcccccc
Q psy9090 114 PTRALFQIVRNP-PPGLYRASNWSQHYVDFIAECLEKNPEHRP---YMSELLEHPFITSLPENDLHLST 178 (488)
Q Consensus 114 ~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp---s~~ell~hp~f~~~~~~~~~~~~ 178 (488)
+.+...+++... .-..+.....+++++|||.+||. ||++|. +++||..||||+.++|+.+....
T Consensus 393 p~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~ 460 (550)
T KOG0605|consen 393 PQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREMP 460 (550)
T ss_pred HHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhcCC
Confidence 988887776532 12223345668999999999999 999997 58999999999999999876554
No 33
>KOG0599|consensus
Probab=100.00 E-value=6.9e-35 Score=267.19 Aligned_cols=168 Identities=29% Similarity=0.557 Sum_probs=144.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|||++.+.||+|+++|+.|||.++||||||||+|||++++..+||+|||++....++ .+....||||+|+|||.+.+.-
T Consensus 120 lSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G-ekLrelCGTPgYLAPEtikC~m 198 (411)
T KOG0599|consen 120 LSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG-EKLRELCGTPGYLAPETIKCSM 198 (411)
T ss_pred ecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc-hhHHHhcCCCcccChhheeeec
Confidence 689999999999999999999999999999999999999999999999999988765 6677889999999999998732
Q ss_pred -cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCC-CCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 -KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPP-GLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 -~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
.+-.+|+..+|+|++||++|.|+.|.+||+.....-.+..+..+... ..+...++|...++||.+||+.||.+|.|++
T Consensus 199 ~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritak 278 (411)
T KOG0599|consen 199 YENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAK 278 (411)
T ss_pred ccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHH
Confidence 23467999999999999999999999999876655545555544321 1123346689999999999999999999999
Q ss_pred HHhcCcCCCCC
Q psy9090 159 ELLEHPFITSL 169 (488)
Q Consensus 159 ell~hp~f~~~ 169 (488)
++|.||||.++
T Consensus 279 e~LaHpff~q~ 289 (411)
T KOG0599|consen 279 EALAHPFFIQI 289 (411)
T ss_pred HHhcChHHHHH
Confidence 99999999654
No 34
>KOG0593|consensus
Probab=100.00 E-value=1.7e-34 Score=268.27 Aligned_cols=166 Identities=27% Similarity=0.563 Sum_probs=143.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++++.++.|++|++.|+.|||++++|||||||+|||++.+|.+||||||+|+....+....+..+.|.+|+|||.+.+.
T Consensus 98 ~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGD- 176 (396)
T KOG0593|consen 98 VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGD- 176 (396)
T ss_pred CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhccc-
Confidence 4788999999999999999999999999999999999999999999999999887555666777899999999999874
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC-----------------------CCCCCC-----CC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN-----------------------PPPGLY-----RA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~-----------------------~~~~~~-----~~ 132 (488)
.+|+..+||||+||++.||++|.+.|++.+...+++.|... +.+... ..
T Consensus 177 ---tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~ 253 (396)
T KOG0593|consen 177 ---TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKY 253 (396)
T ss_pred ---CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhc
Confidence 68999999999999999999999999999988887776531 001100 12
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
+..+..+.+|+++||..||.+|++.+++|.||||.++-
T Consensus 254 p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 254 PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred ccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHH
Confidence 34567789999999999999999999999999996543
No 35
>KOG0588|consensus
Probab=100.00 E-value=4.9e-34 Score=289.21 Aligned_cols=163 Identities=31% Similarity=0.536 Sum_probs=145.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.+++++++||+.|+.|||..+|+||||||+|+|++..+.|||+|||+|..-.++ ....+.||+|+|.|||++.+
T Consensus 109 l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g-klLeTSCGSPHYA~PEIV~G-- 185 (786)
T KOG0588|consen 109 LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG-KLLETSCGSPHYAAPEIVSG-- 185 (786)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC-ccccccCCCcccCCchhhcC--
Confidence 689999999999999999999999999999999999999999999999999765443 66778899999999999998
Q ss_pred cCCCCC-CCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGY-DNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~-~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
.+| +.++||||+|||||.|++|+.||.+.+...++.++.++. +..|.++|+++++||.+||..||++|+|.++
T Consensus 186 ---~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~---f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~e 259 (786)
T KOG0588|consen 186 ---RPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV---FEMPSNISSEAQDLLRRMLDVDPSTRITTEE 259 (786)
T ss_pred ---CCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc---ccCCCcCCHHHHHHHHHHhccCccccccHHH
Confidence 455 578999999999999999999999888777777776653 3356889999999999999999999999999
Q ss_pred HhcCcCCCCCCCC
Q psy9090 160 LLEHPFITSLPEN 172 (488)
Q Consensus 160 ll~hp~f~~~~~~ 172 (488)
|++|||+.....-
T Consensus 260 I~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 260 ILKHPFLSGYTSL 272 (786)
T ss_pred HhhCchhhcCCCC
Confidence 9999999876543
No 36
>KOG0583|consensus
Probab=100.00 E-value=1.2e-33 Score=284.63 Aligned_cols=160 Identities=31% Similarity=0.550 Sum_probs=140.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC-CcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD-GEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
|+|.+++.+++||+.||+|||++||+||||||+|||++.+ +.+||+|||++...........+.+|||.|+|||++.+
T Consensus 117 l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~- 195 (370)
T KOG0583|consen 117 LKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSG- 195 (370)
T ss_pred CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCC-
Confidence 5789999999999999999999999999999999999999 99999999999877323356778899999999999987
Q ss_pred ccCCCC-CC-CccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCc-CHHHHHHHHHhcccCCCCCCC
Q psy9090 80 HKEVDG-YD-NRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNW-SQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 80 ~~~~~~-~~-~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~li~~~L~~dP~~Rps 156 (488)
.. |+ .++||||+||+||.|++|+.||.+.+.......+..... ..|..+ |+++++|+.+||..||.+|+|
T Consensus 196 ----~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~---~~p~~~~S~~~~~Li~~mL~~~P~~R~t 268 (370)
T KOG0583|consen 196 ----KGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF---KIPSYLLSPEARSLIEKMLVPDPSTRIT 268 (370)
T ss_pred ----CCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc---cCCCCcCCHHHHHHHHHHcCCCcccCCC
Confidence 33 65 689999999999999999999999877766666555422 234455 999999999999999999999
Q ss_pred HHHHhcCcCCCC
Q psy9090 157 MSELLEHPFITS 168 (488)
Q Consensus 157 ~~ell~hp~f~~ 168 (488)
+.++++||||+.
T Consensus 269 ~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 269 LLEILEHPWFQK 280 (370)
T ss_pred HHHHhhChhhcc
Confidence 999999999986
No 37
>KOG0690|consensus
Probab=100.00 E-value=5.8e-34 Score=266.72 Aligned_cols=179 Identities=30% Similarity=0.518 Sum_probs=161.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++|..++++-.+|+.||.|||+++||+||||.+|.|++++|+|||+|||+++.-.......+++||||.|+|||++..
T Consensus 265 FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleD-- 342 (516)
T KOG0690|consen 265 FSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLED-- 342 (516)
T ss_pred ccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhcc--
Confidence 578899999999999999999999999999999999999999999999999987666677889999999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..|+.++|+|.+||++|||+||+.||...+......-|+.. .+..|..++++++.|+..+|.+||.+|.
T Consensus 343 ---nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e---d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpd 416 (516)
T KOG0690|consen 343 ---NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME---DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPD 416 (516)
T ss_pred ---ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh---hccCCccCCHHHHHHHHHHhhcChHhhcCCCch
Confidence 67999999999999999999999999988766655544433 3345778999999999999999999997
Q ss_pred CHHHHhcCcCCCCCCCCcccccccccccccch
Q psy9090 156 YMSELLEHPFITSLPENDLHLSTVNCQYKDQE 187 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~ 187 (488)
.+.++.+|+||.+++|+....+.+.++|+++.
T Consensus 417 DakEi~~h~FF~~v~W~~~~~Kki~PPfKPqV 448 (516)
T KOG0690|consen 417 DAKEIMRHRFFASVDWEATYRKKIEPPFKPQV 448 (516)
T ss_pred hHHHHHhhhhhccCCHHHHHHhccCCCCCCCc
Confidence 47899999999999999999999999998864
No 38
>KOG0579|consensus
Probab=100.00 E-value=2.3e-33 Score=281.55 Aligned_cols=172 Identities=40% Similarity=0.882 Sum_probs=162.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.+|..+++|++.||.|||+++|||||||..|||++-+|.|+|+|||.+...........+++|||+|||||+..+..
T Consensus 127 LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET 206 (1187)
T KOG0579|consen 127 LTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCET 206 (1187)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeecc
Confidence 68999999999999999999999999999999999999999999999999987766666778999999999999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
-...+|+.++||||||+.|.+|.-+.+|-...++...+.++-+..+|.+..|..|+..+.|++++||.+||..||++.++
T Consensus 207 ~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaql 286 (1187)
T KOG0579|consen 207 FKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQL 286 (1187)
T ss_pred ccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcCCCCCCCC
Q psy9090 161 LEHPFITSLPEN 172 (488)
Q Consensus 161 l~hp~f~~~~~~ 172 (488)
++||||.+++.+
T Consensus 287 l~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 287 LKHPFVQNAPSN 298 (1187)
T ss_pred hhCcccccCCcc
Confidence 999999988765
No 39
>KOG0661|consensus
Probab=100.00 E-value=3.3e-33 Score=273.88 Aligned_cols=165 Identities=29% Similarity=0.525 Sum_probs=143.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|..|+.|+.||++||+|+|++|+.|||+||+|||+..+..|||+|||+|+..... ...+..+.|.+|+|||++..
T Consensus 107 fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk-pPYTeYVSTRWYRAPEvLLr-- 183 (538)
T KOG0661|consen 107 FSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK-PPYTEYVSTRWYRAPEVLLR-- 183 (538)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC-CCcchhhhcccccchHHhhh--
Confidence 689999999999999999999999999999999999999999999999999988765 55667789999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CC------------------CCCC------CCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PP------------------PGLY------RAS 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~------------------~~~~------~~~ 133 (488)
...|+.++|+|++|||++|+.+-++.|.+.+..+++.++..- +. |... ..+
T Consensus 184 --s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p 261 (538)
T KOG0661|consen 184 --SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP 261 (538)
T ss_pred --ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc
Confidence 267999999999999999999999999999998888887631 10 0000 123
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
+++.++.+||.+||..||.+|||+.++|+||||..-.
T Consensus 262 ~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 262 NASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred ccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 4789999999999999999999999999999997543
No 40
>KOG0198|consensus
Probab=100.00 E-value=2.1e-33 Score=272.83 Aligned_cols=166 Identities=33% Similarity=0.680 Sum_probs=139.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-CCcEEEEecCCcccccc---ccCccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-DGEVKIVDFGLSRETAN---TFDKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~~---~~~~~~~~~gt~~y~aPE~l 76 (488)
|+|..++.+.+||++||.|||++|||||||||+|||++. ++.+||+|||+++.... .........|||.|||||++
T Consensus 114 l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi 193 (313)
T KOG0198|consen 114 LPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVI 193 (313)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhh
Confidence 689999999999999999999999999999999999999 79999999999887653 11234467899999999999
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCC-CChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFED-MHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
..+ ....+++|||||||++.||+||++||.. ......+..+......+ ..|..+|+++++||.+|+..+|++||
T Consensus 194 ~~g----~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rp 268 (313)
T KOG0198|consen 194 RNG----EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP-EIPDSLSDEAKDFLRKCFKRDPEKRP 268 (313)
T ss_pred cCC----CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC-CCCcccCHHHHHHHHHHhhcCcccCc
Confidence 841 1223589999999999999999999987 45555566665544222 45677899999999999999999999
Q ss_pred CHHHHhcCcCCCCCCC
Q psy9090 156 YMSELLEHPFITSLPE 171 (488)
Q Consensus 156 s~~ell~hp~f~~~~~ 171 (488)
|++++|+|||.+....
T Consensus 269 ta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 269 TAEELLEHPFLKQNSI 284 (313)
T ss_pred CHHHHhhChhhhcccc
Confidence 9999999999986443
No 41
>KOG0582|consensus
Probab=100.00 E-value=3.3e-33 Score=271.93 Aligned_cols=170 Identities=39% Similarity=0.798 Sum_probs=147.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc----ccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK----KTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~----~~~~gt~~y~aPE~l 76 (488)
|+|..|+.|+++++.||.|||++|-||||||+.||||+.+|.|||+|||.+........+. .+++|||+|||||++
T Consensus 123 l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl 202 (516)
T KOG0582|consen 123 LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVL 202 (516)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHh
Confidence 6799999999999999999999999999999999999999999999999876554332222 567999999999996
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCC-------CCCCCcCHHHHHHHHHhccc
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGL-------YRASNWSQHYVDFIAECLEK 149 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~s~~~~~li~~~L~~ 149 (488)
.. ...+|+.|+||||||++..||.+|..||....+.+.+...+.+.+|.. .....++..++.+|..||.+
T Consensus 203 ~q---~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~k 279 (516)
T KOG0582|consen 203 MQ---QLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVK 279 (516)
T ss_pred hh---cccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhc
Confidence 54 236899999999999999999999999999999998888888776622 12345678899999999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCCCCc
Q psy9090 150 NPEHRPYMSELLEHPFITSLPEND 173 (488)
Q Consensus 150 dP~~Rps~~ell~hp~f~~~~~~~ 173 (488)
||.+|||++++|+|+||+......
T Consensus 280 DP~kRptAskLlkh~FFk~~k~~~ 303 (516)
T KOG0582|consen 280 DPSKRPTASKLLKHAFFKKAKSKE 303 (516)
T ss_pred CcccCCCHHHHhccHHHhhccchh
Confidence 999999999999999999865443
No 42
>KOG0659|consensus
Probab=100.00 E-value=1.7e-32 Score=251.07 Aligned_cols=168 Identities=29% Similarity=0.481 Sum_probs=144.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+..+++.|+.++++||+|||++.|+||||||.|+|++.+|.+||+|||+++.+..........+-|.+|+|||.+.+.
T Consensus 98 l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGs- 176 (318)
T KOG0659|consen 98 LSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGS- 176 (318)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccc-
Confidence 5678999999999999999999999999999999999999999999999999887765555555789999999999874
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CCCCCC----------------------CCCCc
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PPPGLY----------------------RASNW 135 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~~~~~----------------------~~~~~ 135 (488)
..|+..+||||+||++.||+.|.+-|.+.+..+++..+.+. +.+..+ ..+..
T Consensus 177 ---r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aa 253 (318)
T KOG0659|consen 177 ---RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAA 253 (318)
T ss_pred ---hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccc
Confidence 67999999999999999999999999999888887777641 111111 11234
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 136 SQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 136 s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
+.++.+|+.+||..||.+|+|+.|+|+|+||++.|..
T Consensus 254 s~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p 290 (318)
T KOG0659|consen 254 SSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP 290 (318)
T ss_pred cHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence 6778999999999999999999999999999986543
No 43
>KOG0604|consensus
Probab=99.98 E-value=7.3e-33 Score=257.02 Aligned_cols=164 Identities=29% Similarity=0.486 Sum_probs=135.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC---CcEEEEecCCccccccccCccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD---GEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~ 77 (488)
++|.++..|++||..|+.|||+.+|.||||||+|+|...+ ..+||+|||+++..... ....+.+.||.|.|||++.
T Consensus 158 fTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~-~~L~TPc~TPyYvaPevlg 236 (400)
T KOG0604|consen 158 FTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP-GDLMTPCFTPYYVAPEVLG 236 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC-ccccCCcccccccCHHHhC
Confidence 5799999999999999999999999999999999999754 45999999999987653 4556778999999999996
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHH---HHHHHhCCCCCCC--CCCCcCHHHHHHHHHhcccCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRA---LFQIVRNPPPGLY--RASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~---~~~~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dP~ 152 (488)
. ..|+..+|+||+||++|.|+||.+||........ +...++.....++ .....|+.++++|+++|..+|.
T Consensus 237 ~-----eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~Pt 311 (400)
T KOG0604|consen 237 P-----EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPT 311 (400)
T ss_pred c-----hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCch
Confidence 5 6799999999999999999999999977654221 2222222222222 2234589999999999999999
Q ss_pred CCCCHHHHhcCcCCCCCC
Q psy9090 153 HRPYMSELLEHPFITSLP 170 (488)
Q Consensus 153 ~Rps~~ell~hp~f~~~~ 170 (488)
+|.|+.++++|||+.+..
T Consensus 312 eRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 312 ERLTIEEVMDHPWINQYE 329 (400)
T ss_pred hheeHHHhhcCchhcccc
Confidence 999999999999998754
No 44
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.98 E-value=2.6e-32 Score=272.98 Aligned_cols=172 Identities=31% Similarity=0.540 Sum_probs=145.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||+.|+|||++.+
T Consensus 92 ~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 169 (323)
T cd05571 92 FSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-- 169 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcC--
Confidence 578899999999999999999999999999999999999999999999998754333233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..++.++||||+||++|+|++|..||...........+.... ...+..+++++.+||.+||..||++||
T Consensus 170 ---~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 243 (323)
T cd05571 170 ---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPE 243 (323)
T ss_pred ---CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCC
Confidence 568899999999999999999999998877655555554432 223567899999999999999999999
Q ss_pred CHHHHhcCcCCCCCCCCcccccccc
Q psy9090 156 YMSELLEHPFITSLPENDLHLSTVN 180 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~~~~~~ 180 (488)
++.++++||||.+++|.........
T Consensus 244 ~~~~ll~h~~f~~~~~~~~~~~~~~ 268 (323)
T cd05571 244 DAKEIMEHRFFASINWQDVVQKKLE 268 (323)
T ss_pred CHHHHHcCCCcCCCCHHHHHhCCCC
Confidence 8999999999999988765444333
No 45
>KOG0594|consensus
Probab=99.98 E-value=5.1e-32 Score=259.13 Aligned_cols=167 Identities=27% Similarity=0.554 Sum_probs=140.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHK 81 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~ 81 (488)
+...++.+++||+.||+|||+++|+||||||.||||+++|.+||+|||+++...-+......-++|.+|+|||++.+.
T Consensus 118 ~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs-- 195 (323)
T KOG0594|consen 118 PPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGS-- 195 (323)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCC--
Confidence 457899999999999999999999999999999999999999999999998766444445667899999999999873
Q ss_pred CCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CC----CCCC------------C-CC-------C
Q psy9090 82 EVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PP----PGLY------------R-AS-------N 134 (488)
Q Consensus 82 ~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~----~~~~------------~-~~-------~ 134 (488)
..|+..+||||+|||++||+++++.|.+.....++.++.+- +. |... . +. .
T Consensus 196 --~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~ 273 (323)
T KOG0594|consen 196 --TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPK 273 (323)
T ss_pred --CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccc
Confidence 56999999999999999999999999999888877777641 11 1000 0 11 1
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
.++...+++.+||+.+|.+|.|++.+|.||||...+..
T Consensus 274 ~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 274 LDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred cCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 23578999999999999999999999999999987543
No 46
>KOG0663|consensus
Probab=99.98 E-value=4e-32 Score=255.68 Aligned_cols=166 Identities=27% Similarity=0.475 Sum_probs=144.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|++.+++.++.|++.||+|||++.|+||||||+|+|++..|.+|++|||+|+....+....+..+-|.+|+|||.+.+.
T Consensus 174 F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~- 252 (419)
T KOG0663|consen 174 FLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGA- 252 (419)
T ss_pred CchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCC-
Confidence 5688999999999999999999999999999999999999999999999999998877777788899999999999984
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC-------CCCCCCCC---------------------
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN-------PPPGLYRA--------------------- 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~--------------------- 132 (488)
..|+.++|+||+|||+.||+++++.|.+.....++.+|.+- .+|.+...
T Consensus 253 ---~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~ 329 (419)
T KOG0663|consen 253 ---KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFG 329 (419)
T ss_pred ---cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhcc
Confidence 67999999999999999999999999999888887777641 11111100
Q ss_pred -CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 133 -SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 133 -~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
..+++...+|+..+|.+||.+|.|+++.|+|.||...|
T Consensus 330 ~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 330 ALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred ccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 11357789999999999999999999999999999854
No 47
>KOG0660|consensus
Probab=99.97 E-value=3.1e-32 Score=259.97 Aligned_cols=167 Identities=29% Similarity=0.512 Sum_probs=139.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc--cCccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT--FDKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~l~~ 78 (488)
|++..++.+++||+.||+|+|+.||+||||||.|+|++.+..+|+||||+|+..... ....+..+.|.+|+|||++..
T Consensus 122 L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~ 201 (359)
T KOG0660|consen 122 LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLN 201 (359)
T ss_pred ccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhc
Confidence 578899999999999999999999999999999999999999999999999877532 122345678999999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC----------------------CCCCC------
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP----------------------PPGLY------ 130 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~----------------------~~~~~------ 130 (488)
. ..|+.++||||+|||+.||++|++.|.+.+...++..+..-. .+..+
T Consensus 202 ~----~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~ 277 (359)
T KOG0660|consen 202 S----SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSS 277 (359)
T ss_pred c----ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHH
Confidence 3 679999999999999999999999999887766655554210 01110
Q ss_pred CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 131 RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 131 ~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
..++.++.+.+|+.+||..||.+|+|++++|+|||+..+..
T Consensus 278 ~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd 318 (359)
T KOG0660|consen 278 IFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD 318 (359)
T ss_pred HcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence 12356899999999999999999999999999999987643
No 48
>KOG0696|consensus
Probab=99.97 E-value=3.7e-32 Score=261.52 Aligned_cols=179 Identities=30% Similarity=0.532 Sum_probs=159.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+.|..+.+|+.+|+-||-+||++||++||||.+||+++.+|+|||+|||+++...-......+++|||.|+|||++..
T Consensus 447 FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~Y-- 524 (683)
T KOG0696|consen 447 FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAY-- 524 (683)
T ss_pred cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEe--
Confidence 457889999999999999999999999999999999999999999999999876555566788999999999999986
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
++|+.++|+||+||+||||+.|++||.+.+..+....|.... ...|..+|.++.++.+.+|.+.|.+|...
T Consensus 525 ---qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn---vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ 598 (683)
T KOG0696|consen 525 ---QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN---VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPE 598 (683)
T ss_pred ---cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc---CcCcccccHHHHHHHHHHhhcCCccccCCCCc
Confidence 889999999999999999999999999999877776666542 23467889999999999999999999754
Q ss_pred --HHHhcCcCCCCCCCCcccccccccccccch
Q psy9090 158 --SELLEHPFITSLPENDLHLSTVNCQYKDQE 187 (488)
Q Consensus 158 --~ell~hp~f~~~~~~~~~~~~~~~~~~~~~ 187 (488)
.++-.||||+.++|+.+...++.+++++..
T Consensus 599 ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~ 630 (683)
T KOG0696|consen 599 GERDIREHPFFRRIDWEKLERREIQPPFKPKI 630 (683)
T ss_pred cccchhhCcchhhccHHHHhhccCCCCCCCcc
Confidence 689999999999999999999888887754
No 49
>KOG0201|consensus
Probab=99.97 E-value=4.7e-33 Score=270.73 Aligned_cols=162 Identities=46% Similarity=0.956 Sum_probs=148.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.++..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||.+...........+++|||.|||||++.+
T Consensus 108 ~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~-- 185 (467)
T KOG0201|consen 108 LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQ-- 185 (467)
T ss_pred CccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhcc--
Confidence 367888999999999999999999999999999999999999999999999888776666789999999999999986
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..|+.++||||||++.+||++|.+|+.+.++...++-|-+..+|.+. ..||+.+++||..||++||+.|||+.++
T Consensus 186 ---~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~--~~~S~~~kEFV~~CL~k~P~~RpsA~~L 260 (467)
T KOG0201|consen 186 ---SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLD--GDFSPPFKEFVEACLDKNPEFRPSAKEL 260 (467)
T ss_pred ---ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccc--cccCHHHHHHHHHHhhcCcccCcCHHHH
Confidence 78999999999999999999999999999987777777666666553 3899999999999999999999999999
Q ss_pred hcCcCCCCC
Q psy9090 161 LEHPFITSL 169 (488)
Q Consensus 161 l~hp~f~~~ 169 (488)
|.|+|++..
T Consensus 261 LKh~FIk~a 269 (467)
T KOG0201|consen 261 LKHKFIKRA 269 (467)
T ss_pred hhhHHHHhc
Confidence 999999873
No 50
>KOG0591|consensus
Probab=99.97 E-value=3.6e-32 Score=250.55 Aligned_cols=151 Identities=27% Similarity=0.502 Sum_probs=134.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH--CC--CeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE--NH--VIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~--~g--ivHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l 76 (488)
++|..+|.++.|++.||..||. .. |+||||||.||+++.+|.|||+|||+++.+.....-..+.+|||.||+||.+
T Consensus 121 ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i 200 (375)
T KOG0591|consen 121 IPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERI 200 (375)
T ss_pred CchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHH
Confidence 5899999999999999999999 44 9999999999999999999999999999887766666788999999999999
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
.. .+|+.++||||+||++|||+.-++||.+.+-...-.+|.....++.+ ...+|.++..+|..|+..||..||+
T Consensus 201 ~~-----~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p-~~~YS~~l~~li~~ci~vd~~~RP~ 274 (375)
T KOG0591|consen 201 HE-----SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLP-DEHYSTDLRELINMCIAVDPEQRPD 274 (375)
T ss_pred hc-----CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCc-HHHhhhHHHHHHHHHccCCcccCCC
Confidence 87 78999999999999999999999999999766666666655444332 2567999999999999999999998
Q ss_pred H
Q psy9090 157 M 157 (488)
Q Consensus 157 ~ 157 (488)
.
T Consensus 275 t 275 (375)
T KOG0591|consen 275 T 275 (375)
T ss_pred c
Confidence 5
No 51
>KOG0600|consensus
Probab=99.97 E-value=8.8e-32 Score=265.66 Aligned_cols=165 Identities=25% Similarity=0.502 Sum_probs=141.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
|++.+|++||+||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+....... ..+..+-|.+|+|||++.+.
T Consensus 215 ft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~ 294 (560)
T KOG0600|consen 215 FTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGA 294 (560)
T ss_pred cChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCC
Confidence 68999999999999999999999999999999999999999999999999996654322 35667889999999999984
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh---CCCCCCCC-----------------------CC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR---NPPPGLYR-----------------------AS 133 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~---~~~~~~~~-----------------------~~ 133 (488)
..|+.++|+||+||||.||++|++.|.+.+..+++..|.+ .+....+. ..
T Consensus 295 ----t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~ 370 (560)
T KOG0600|consen 295 ----TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFK 370 (560)
T ss_pred ----cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhc
Confidence 6799999999999999999999999999998888777764 11111111 12
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
.+++...+|+..||..||.+|.|+.++|+|+||+..
T Consensus 371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 371 DFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 357788999999999999999999999999999543
No 52
>KOG0610|consensus
Probab=99.97 E-value=1.4e-31 Score=258.70 Aligned_cols=167 Identities=28% Similarity=0.488 Sum_probs=145.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccc------------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETAN------------------------ 56 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~------------------------ 56 (488)
|+|+.+++|+.+|+.||+|||-.|||+|||||+||||.++|+|.|+||.++.....
T Consensus 176 fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~ 255 (459)
T KOG0610|consen 176 FSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQP 255 (459)
T ss_pred cchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccc
Confidence 68999999999999999999999999999999999999999999999988642100
Q ss_pred -----------c---------------------cCccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhc
Q psy9090 57 -----------T---------------------FDKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGD 104 (488)
Q Consensus 57 -----------~---------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~ellt 104 (488)
. ..+...++||-.|+|||++++ .+.+.++|||+|||++|||+.
T Consensus 256 s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-----~GHgsAVDWWtfGIflYEmLy 330 (459)
T KOG0610|consen 256 SCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-----EGHGSAVDWWTFGIFLYEMLY 330 (459)
T ss_pred cccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec-----CCCCchhhHHHHHHHHHHHHh
Confidence 0 011234689999999999998 678899999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC----HHHHhcCcCCCCCCCCc
Q psy9090 105 GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY----MSELLEHPFITSLPEND 173 (488)
Q Consensus 105 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~~~~~~~ 173 (488)
|..||.+.+..+.+.+++.++. .++.....+..++|||+++|.+||.+|.. +.+|.+||||+.+.|.-
T Consensus 331 G~TPFKG~~~~~Tl~NIv~~~l-~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaL 402 (459)
T KOG0610|consen 331 GTTPFKGSNNKETLRNIVGQPL-KFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWAL 402 (459)
T ss_pred CCCCcCCCCchhhHHHHhcCCC-cCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhh
Confidence 9999999999888888887653 33334467899999999999999999997 99999999999999983
No 53
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=1.3e-31 Score=267.49 Aligned_cols=175 Identities=31% Similarity=0.523 Sum_probs=146.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 93 l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (320)
T cd05590 93 FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQE-- 170 (320)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcC--
Confidence 578899999999999999999999999999999999999999999999998754332233445679999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|+|||||++|+|++|+.||...+.......+..... ..+..++.+++++|.+||..||.+||++
T Consensus 171 ---~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~ 244 (320)
T cd05590 171 ---MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV---VYPTWLSQDAVDILKAFMTKNPTMRLGSLTL 244 (320)
T ss_pred ---CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 5688899999999999999999999998887666666554322 2345679999999999999999999998
Q ss_pred ---HHHhcCcCCCCCCCCccccccccccc
Q psy9090 158 ---SELLEHPFITSLPENDLHLSTVNCQY 183 (488)
Q Consensus 158 ---~ell~hp~f~~~~~~~~~~~~~~~~~ 183 (488)
+++++||||..+.|..+......+++
T Consensus 245 ~~~~~~~~h~~f~~~~~~~~~~~~~~~~~ 273 (320)
T cd05590 245 GGEEAILRHPFFKELDWEKLNRRQIEPPF 273 (320)
T ss_pred CCHHHHHcCCCcCCCCHHHHHhCCCCCCc
Confidence 99999999999888765444433333
No 54
>KOG0597|consensus
Probab=99.97 E-value=4.9e-32 Score=269.78 Aligned_cols=160 Identities=33% Similarity=0.641 Sum_probs=145.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|+.++.+..|++.||.|||+++|+|||+||.|||++..|.+|+||||+++-..........+.|||.|||||++.+
T Consensus 97 lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e-- 174 (808)
T KOG0597|consen 97 LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEE-- 174 (808)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcC--
Confidence 689999999999999999999999999999999999999999999999999987665556677889999999999986
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.+|+..+|+|||||++||+.+|++||...........|...+.. .|...|..+.+|++.+|.+||.+|.|+.++
T Consensus 175 ---~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~---~p~~~S~~f~nfl~gLL~kdP~~RltW~~L 248 (808)
T KOG0597|consen 175 ---QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK---PPSTASSSFVNFLQGLLIKDPAQRLTWTDL 248 (808)
T ss_pred ---CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC---CcccccHHHHHHHHHHhhcChhhcccHHHH
Confidence 78999999999999999999999999987777777777765443 355889999999999999999999999999
Q ss_pred hcCcCCCC
Q psy9090 161 LEHPFITS 168 (488)
Q Consensus 161 l~hp~f~~ 168 (488)
+.|||+++
T Consensus 249 l~HpF~k~ 256 (808)
T KOG0597|consen 249 LGHPFWKG 256 (808)
T ss_pred hcChHHhh
Confidence 99999875
No 55
>KOG0986|consensus
Probab=99.97 E-value=7.3e-32 Score=262.58 Aligned_cols=178 Identities=28% Similarity=0.459 Sum_probs=151.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|+.+.+|+.+|+.||.+||+.+||+|||||+|||+|+.|+|+|+|+|+|..+... ......+||.+|||||++..
T Consensus 284 F~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g-~~~~~rvGT~GYMAPEvl~n-- 360 (591)
T KOG0986|consen 284 FDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG-KPIRGRVGTVGYMAPEVLQN-- 360 (591)
T ss_pred CchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCC-CccccccCcccccCHHHHcC--
Confidence 689999999999999999999999999999999999999999999999999987654 44556699999999999987
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH---HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC--
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT---RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP-- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp-- 155 (488)
..|+.+.|+|||||++|+|+.|+.||...... +.+.+.+...... .+..+|++++++.+.+|.+||++|.
T Consensus 361 ---e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~e--y~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 361 ---EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEE--YSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred ---CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhh--cccccCHHHHHHHHHHHccCHHHhccC
Confidence 56999999999999999999999999654322 2333333332222 3478899999999999999999998
Q ss_pred ---CHHHHhcCcCCCCCCCCcccccccccccccc
Q psy9090 156 ---YMSELLEHPFITSLPENDLHLSTVNCQYKDQ 186 (488)
Q Consensus 156 ---s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~ 186 (488)
+++++.+||||++++|..+......+++.|.
T Consensus 436 rg~ga~evk~HpfFk~lnw~rleagml~PPfiPd 469 (591)
T KOG0986|consen 436 RGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPD 469 (591)
T ss_pred CCcCcchhhhCcccccCCHhHHhccCCCCCCCCC
Confidence 4679999999999999998888777777553
No 56
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.97 E-value=1.5e-31 Score=262.61 Aligned_cols=177 Identities=23% Similarity=0.404 Sum_probs=143.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++...... .......||+.|+|||++.+
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-- 175 (285)
T cd05631 99 FDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-ETVRGRVGTVGYMAPEVINN-- 175 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-CeecCCCCCCCccCHhhhcC--
Confidence 468889999999999999999999999999999999999999999999998765332 22344578999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHH---HHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC-
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRA---LFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps- 156 (488)
..++.++||||+||++|+|++|+.||........ ....+... ....+..++..+.+||++||..||.+||+
T Consensus 176 ---~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05631 176 ---EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED--QEEYSEKFSEDAKSICRMLLTKNPKERLGC 250 (285)
T ss_pred ---CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHHhhcCHHHhcCC
Confidence 5688999999999999999999999986543222 22222221 12234568999999999999999999997
Q ss_pred ----HHHHhcCcCCCCCCCCccccccccccccc
Q psy9090 157 ----MSELLEHPFITSLPENDLHLSTVNCQYKD 185 (488)
Q Consensus 157 ----~~ell~hp~f~~~~~~~~~~~~~~~~~~~ 185 (488)
++++++||||..++++.+......+++.+
T Consensus 251 ~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05631 251 RGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP 283 (285)
T ss_pred CCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCC
Confidence 89999999999999887765555555443
No 57
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=2.4e-31 Score=264.63 Aligned_cols=166 Identities=30% Similarity=0.559 Sum_probs=141.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 90 ~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 167 (312)
T cd05585 90 FDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLG-- 167 (312)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcC--
Confidence 578899999999999999999999999999999999999999999999998754333233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC---CH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP---YM 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp---s~ 157 (488)
..++.++||||+||++|+|++|..||.+.........+..... ..+..+++.+++||.+||..||.+|| ++
T Consensus 168 ---~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 168 ---HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL---RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred ---CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC---CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 5688999999999999999999999988776666555554322 23567899999999999999999997 57
Q ss_pred HHHhcCcCCCCCCCCcc
Q psy9090 158 SELLEHPFITSLPENDL 174 (488)
Q Consensus 158 ~ell~hp~f~~~~~~~~ 174 (488)
.+++.||||....+...
T Consensus 242 ~e~l~hp~~~~~~~~~~ 258 (312)
T cd05585 242 QEIKNHPFFSQLSWKKL 258 (312)
T ss_pred HHHHcCCCcCCCCHHHH
Confidence 99999999998765543
No 58
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=2.1e-31 Score=265.57 Aligned_cols=170 Identities=32% Similarity=0.588 Sum_probs=142.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||+.|+|||++.+
T Consensus 93 ~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (316)
T cd05592 93 FDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKG-- 170 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcC--
Confidence 578899999999999999999999999999999999999999999999998764333233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH-HH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM-SE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~-~e 159 (488)
..++.++|+|||||++|+|++|..||.+.........+... .+. .+..++.++.+||.+||..+|.+||++ .+
T Consensus 171 ---~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~~--~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~ 244 (316)
T cd05592 171 ---QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND-RPH--FPRWISKEAKDCLSKLFERDPTKRLGVDGD 244 (316)
T ss_pred ---CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCC--CCCCCCHHHHHHHHHHccCCHHHcCCChHH
Confidence 56889999999999999999999999988766555554432 222 345678999999999999999999986 58
Q ss_pred HhcCcCCCCCCCCcccccc
Q psy9090 160 LLEHPFITSLPENDLHLST 178 (488)
Q Consensus 160 ll~hp~f~~~~~~~~~~~~ 178 (488)
+++||||..+.|..+....
T Consensus 245 l~~h~~~~~~~~~~~~~~~ 263 (316)
T cd05592 245 IRQHPFFRGIDWERLEKRE 263 (316)
T ss_pred HHcCcccCCCCHHHHHhCC
Confidence 8999999998876544333
No 59
>KOG0658|consensus
Probab=99.97 E-value=1.3e-31 Score=256.14 Aligned_cols=169 Identities=27% Similarity=0.509 Sum_probs=142.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC-CcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD-GEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
|+.-+++-++.||+.||+|||+.||+||||||.|+|+|.+ |.+||||||.|+..... ....+...|..|+|||.+.+.
T Consensus 122 mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~-epniSYicSRyYRaPELifga 200 (364)
T KOG0658|consen 122 MPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG-EPNISYICSRYYRAPELIFGA 200 (364)
T ss_pred CceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccC-CCceeEEEeccccCHHHHcCc
Confidence 3455788999999999999999999999999999999975 89999999999988765 445667789999999999874
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC-------------CC------CCCC-------CCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN-------------PP------PGLY-------RAS 133 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~-------------~~------~~~~-------~~~ 133 (488)
..|+.+.||||.||++.||+-|++.|.+.+...++..+++- +. |... ...
T Consensus 201 ----~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~ 276 (364)
T KOG0658|consen 201 ----TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFK 276 (364)
T ss_pred ----cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeeccc
Confidence 77999999999999999999999999998887777666531 00 1110 123
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCCcc
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPENDL 174 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~~~ 174 (488)
..++++.+|+.++|.++|.+|.++.+++.||||..+.....
T Consensus 277 ~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~ 317 (364)
T KOG0658|consen 277 RLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNT 317 (364)
T ss_pred CCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCc
Confidence 45789999999999999999999999999999988765543
No 60
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=2.4e-31 Score=265.72 Aligned_cols=169 Identities=30% Similarity=0.505 Sum_probs=144.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............||+.|+|||++.+
T Consensus 93 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (321)
T cd05591 93 FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQE-- 170 (321)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcC--
Confidence 468889999999999999999999999999999999999999999999998754333233445679999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..++.++|||||||++|+|++|+.||...........+..... ..+..+++++.++|.+||..+|++||
T Consensus 171 ---~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~ 244 (321)
T cd05591 171 ---LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV---LYPVWLSKEAVSILKAFMTKNPNKRLGCVAS 244 (321)
T ss_pred ---CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCC
Confidence 5688999999999999999999999998887766666655432 23445789999999999999999999
Q ss_pred --CHHHHhcCcCCCCCCCCccccc
Q psy9090 156 --YMSELLEHPFITSLPENDLHLS 177 (488)
Q Consensus 156 --s~~ell~hp~f~~~~~~~~~~~ 177 (488)
+++++++||||..++|..+...
T Consensus 245 ~~~~~~~~~hp~~~~~~~~~~~~~ 268 (321)
T cd05591 245 QGGEDAIKQHPFFKEIDWVLLEQR 268 (321)
T ss_pred CCCHHHHhcCCccCCCCHHHHHhC
Confidence 8999999999999888765433
No 61
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97 E-value=2.3e-31 Score=266.74 Aligned_cols=169 Identities=30% Similarity=0.530 Sum_probs=142.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 92 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 169 (328)
T cd05593 92 FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLED-- 169 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcC--
Confidence 578899999999999999999999999999999999999999999999998754332233345679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..++.++|||||||++|+|++|..||...........+.... ...+..+++++.+||.+||..||.+|+
T Consensus 170 ---~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 243 (328)
T cd05593 170 ---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED---IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPD 243 (328)
T ss_pred ---CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC---ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCC
Confidence 568899999999999999999999998877655544444322 223567899999999999999999997
Q ss_pred CHHHHhcCcCCCCCCCCccccc
Q psy9090 156 YMSELLEHPFITSLPENDLHLS 177 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~~~ 177 (488)
++.++++||||....|......
T Consensus 244 ~~~~il~h~~~~~~~~~~~~~~ 265 (328)
T cd05593 244 DAKEIMRHSFFTGVNWQDVYDK 265 (328)
T ss_pred CHHHHhcCCCcCCCCHHHHHhC
Confidence 8999999999999887655433
No 62
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=2.5e-31 Score=265.86 Aligned_cols=171 Identities=30% Similarity=0.550 Sum_probs=143.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.............+||+.|+|||++.+
T Consensus 98 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 175 (324)
T cd05587 98 FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAY-- 175 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcC--
Confidence 478899999999999999999999999999999999999999999999998754322233345679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|+||+||++|+|++|+.||.+.........+..... ..+..+++.+.+++.+||..||.+|++.
T Consensus 176 ---~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 249 (324)
T cd05587 176 ---QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV---SYPKSLSKEAVSICKGLLTKHPAKRLGCGPT 249 (324)
T ss_pred ---CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCC
Confidence 5688999999999999999999999988877666655554322 2345679999999999999999999976
Q ss_pred --HHHhcCcCCCCCCCCccccccc
Q psy9090 158 --SELLEHPFITSLPENDLHLSTV 179 (488)
Q Consensus 158 --~ell~hp~f~~~~~~~~~~~~~ 179 (488)
+++++||||+.++|..+.....
T Consensus 250 ~~~~~~~hp~~~~~~~~~~~~~~~ 273 (324)
T cd05587 250 GERDIREHAFFRRIDWEKLERREI 273 (324)
T ss_pred CHHHHhcCCCcCCCCHHHHHhCCC
Confidence 8999999999998875544333
No 63
>KOG0585|consensus
Probab=99.97 E-value=2.1e-31 Score=260.94 Aligned_cols=167 Identities=34% Similarity=0.563 Sum_probs=141.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc-----cCccccccCCCccccchh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT-----FDKKKTFLGSPSWMAPEI 75 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~-----~~~~~~~~gt~~y~aPE~ 75 (488)
|++.+++.|++.++.||.|||.+|||||||||+|+|++.+|+|||+|||.+...... .......+|||.|+|||.
T Consensus 207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~ 286 (576)
T KOG0585|consen 207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPEL 286 (576)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHh
Confidence 578999999999999999999999999999999999999999999999998765221 122334689999999999
Q ss_pred hcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 76 MRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 76 l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
+.++.. ....+.+.||||+||+||.|+.|+.||.+....+...+|+..+. .++..+.+.+.+++||.+||.+||++|+
T Consensus 287 c~~~~~-~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL-~fP~~pe~~e~~kDli~~lL~KdP~~Ri 364 (576)
T KOG0585|consen 287 CSGGNS-FSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPL-EFPENPEINEDLKDLIKRLLEKDPEQRI 364 (576)
T ss_pred hcCCCC-ccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcc-cCCCcccccHHHHHHHHHHhhcChhhee
Confidence 976432 12345789999999999999999999999887777777776543 3334456789999999999999999999
Q ss_pred CHHHHhcCcCCCCC
Q psy9090 156 YMSELLEHPFITSL 169 (488)
Q Consensus 156 s~~ell~hp~f~~~ 169 (488)
++.++..|||...-
T Consensus 365 ~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 365 TLPDIKLHPWVTRD 378 (576)
T ss_pred ehhhheecceeccC
Confidence 99999999999864
No 64
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=2.7e-31 Score=264.83 Aligned_cols=169 Identities=28% Similarity=0.523 Sum_probs=140.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.............||+.|+|||++.+
T Consensus 93 ~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (316)
T cd05620 93 FDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQG-- 170 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcC--
Confidence 467889999999999999999999999999999999999999999999998754322233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH-HH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM-SE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~-~e 159 (488)
..++.++|+||+||++|+|++|..||.+.........+... .+. .+..++.++++||.+||..||++||++ ++
T Consensus 171 ---~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~l~~dP~~R~~~~~~ 244 (316)
T cd05620 171 ---LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD-TPH--YPRWITKESKDILEKLFERDPTRRLGVVGN 244 (316)
T ss_pred ---CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCC--CCCCCCHHHHHHHHHHccCCHHHcCCChHH
Confidence 56889999999999999999999999887765555444332 222 244578999999999999999999998 58
Q ss_pred HhcCcCCCCCCCCccccc
Q psy9090 160 LLEHPFITSLPENDLHLS 177 (488)
Q Consensus 160 ll~hp~f~~~~~~~~~~~ 177 (488)
+++||||+.+++..+...
T Consensus 245 ~~~h~~f~~~~~~~~~~~ 262 (316)
T cd05620 245 IRGHPFFKTINWTALEKR 262 (316)
T ss_pred HHcCCCcCCCCHHHHHhC
Confidence 999999999887654333
No 65
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=3e-31 Score=265.27 Aligned_cols=177 Identities=31% Similarity=0.523 Sum_probs=148.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 98 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 175 (323)
T cd05616 98 FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY-- 175 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcC--
Confidence 578899999999999999999999999999999999999999999999998754332233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|+|||||++|+|++|+.||.+.........+..... ..+..+++++.+++.+||..+|.+|++.
T Consensus 176 ---~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~ 249 (323)
T cd05616 176 ---QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPE 249 (323)
T ss_pred ---CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---CCCCcCCHHHHHHHHHHcccCHHhcCCCCCC
Confidence 6688999999999999999999999998887666666654322 2345689999999999999999999974
Q ss_pred --HHHhcCcCCCCCCCCccccccccccccc
Q psy9090 158 --SELLEHPFITSLPENDLHLSTVNCQYKD 185 (488)
Q Consensus 158 --~ell~hp~f~~~~~~~~~~~~~~~~~~~ 185 (488)
.++++||||+.++|.........+++.+
T Consensus 250 ~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd05616 250 GERDIKEHAFFRYIDWEKLERKEVQPPYKP 279 (323)
T ss_pred CHHHHhcCCCcCCCCHHHHHhCCCCCCcCC
Confidence 8999999999999887665555554443
No 66
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=4e-31 Score=260.32 Aligned_cols=165 Identities=28% Similarity=0.496 Sum_probs=141.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.... ......||+.|+|||++.+
T Consensus 98 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-- 172 (291)
T cd05612 98 FSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD---RTWTLCGTPEYLAPEVIQS-- 172 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC---CcccccCChhhcCHHHHcC--
Confidence 46888999999999999999999999999999999999999999999999876543 2234579999999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY---- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps---- 156 (488)
..++.++|||||||++|+|++|..||.+.........+..... ..+..+++.+++||++||..||.+||+
T Consensus 173 ---~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~ 246 (291)
T cd05612 173 ---KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL---EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKN 246 (291)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc---CCCccCCHHHHHHHHHHcCCCHHHccCCccC
Confidence 5678899999999999999999999998877666666655432 234556899999999999999999995
Q ss_pred -HHHHhcCcCCCCCCCCcccc
Q psy9090 157 -MSELLEHPFITSLPENDLHL 176 (488)
Q Consensus 157 -~~ell~hp~f~~~~~~~~~~ 176 (488)
++++++||||..++|.....
T Consensus 247 ~~~~~l~h~~~~~~~~~~~~~ 267 (291)
T cd05612 247 GADDVKNHRWFKSVDWDDVPQ 267 (291)
T ss_pred CHHHHhcCccccCCCHHHHhc
Confidence 99999999999988865433
No 67
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=3.7e-31 Score=264.57 Aligned_cols=172 Identities=30% Similarity=0.504 Sum_probs=144.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 93 ~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (323)
T cd05575 93 FPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRK-- 170 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcC--
Confidence 468889999999999999999999999999999999999999999999998754333233445679999999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|||||||++|+|++|..||...........+...... .+..+++.+.++|.+||..||.+||++
T Consensus 171 ---~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (323)
T cd05575 171 ---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLR---LKPNISVSARHLLEGLLQKDRTKRLGAKDD 244 (323)
T ss_pred ---CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCHHHHHHHHHHhhcCHHhCCCCCCC
Confidence 56889999999999999999999999988766666666554322 345679999999999999999999987
Q ss_pred -HHHhcCcCCCCCCCCcccccccc
Q psy9090 158 -SELLEHPFITSLPENDLHLSTVN 180 (488)
Q Consensus 158 -~ell~hp~f~~~~~~~~~~~~~~ 180 (488)
.++++||||....|..+......
T Consensus 245 ~~~il~~~~~~~~~~~~~~~~~~~ 268 (323)
T cd05575 245 FLEIKNHVFFSSINWDDLVNKKIT 268 (323)
T ss_pred HHHHHcCCCcCCCCHHHHhhccCC
Confidence 69999999999888765444333
No 68
>KOG0614|consensus
Probab=99.97 E-value=2e-31 Score=262.36 Aligned_cols=180 Identities=27% Similarity=0.476 Sum_probs=162.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|.+..+++|+..+++|++|||++|||+|||||+|.+++.+|.+||.|||+++..... .++-+++|||.|.|||++..
T Consensus 517 Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g-~KTwTFcGTpEYVAPEIILn-- 593 (732)
T KOG0614|consen 517 FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG-RKTWTFCGTPEYVAPEIILN-- 593 (732)
T ss_pred cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC-CceeeecCCcccccchhhhc--
Confidence 456788999999999999999999999999999999999999999999999998765 67789999999999999987
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY---- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps---- 156 (488)
.+.+.++|.||||+++|||++|.+||.+.++......|+++..... .|..++..+.+||+++...+|.+|..
T Consensus 594 ---KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~-~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~ 669 (732)
T KOG0614|consen 594 ---KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE-FPRRITKTATDLIKKLCRDNPTERLGYQKG 669 (732)
T ss_pred ---cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh-cccccchhHHHHHHHHHhcCcHhhhccccC
Confidence 6788999999999999999999999999999888888887754333 45778999999999999999999985
Q ss_pred -HHHHhcCcCCCCCCCCcccccccccccccch
Q psy9090 157 -MSELLEHPFITSLPENDLHLSTVNCQYKDQE 187 (488)
Q Consensus 157 -~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~ 187 (488)
+.+|..|.||.+++|+.+......+++.++.
T Consensus 670 gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~v 701 (732)
T KOG0614|consen 670 GINDIKKHRWFEGFDWEGLRSRTLPPPIIPSV 701 (732)
T ss_pred ChHHHHhhhhhhcCChhhhhhccCCCCccccC
Confidence 7999999999999999998888887776543
No 69
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97 E-value=4.4e-31 Score=261.48 Aligned_cols=167 Identities=23% Similarity=0.497 Sum_probs=131.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++++.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..............+|+.|+|||++.+.
T Consensus 100 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 178 (303)
T cd07869 100 LHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGS- 178 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCC-
Confidence 4678899999999999999999999999999999999999999999999987543332333455789999999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH-HHHHHHHh---CCCCC----------C----------------C
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT-RALFQIVR---NPPPG----------L----------------Y 130 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~-~~~~~~~~---~~~~~----------~----------------~ 130 (488)
..++.++|+||+||++|+|++|..||.+.... ..+..+.. .+... . .
T Consensus 179 ---~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (303)
T cd07869 179 ---TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAW 255 (303)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHh
Confidence 45788999999999999999999999875432 22222211 11000 0 0
Q ss_pred CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 131 RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 131 ~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
....+++.+++|+.+||+.||++|||+.++++||||++++.
T Consensus 256 ~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 256 NKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred hccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence 01123567899999999999999999999999999998765
No 70
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=4.8e-31 Score=265.57 Aligned_cols=168 Identities=26% Similarity=0.425 Sum_probs=143.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... ......||+.|+|||++.+
T Consensus 128 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~-- 202 (340)
T PTZ00426 128 FPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT---RTYTLCGTPEYIAPEILLN-- 202 (340)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC---CcceecCChhhcCHHHHhC--
Confidence 57889999999999999999999999999999999999999999999999876542 2345679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..++.++|+||+||++|+|++|.+||.+.++......+..... ..+..+++.++++|++||..+|.+|+
T Consensus 203 ---~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~ 276 (340)
T PTZ00426 203 ---VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII---YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKK 276 (340)
T ss_pred ---CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHcccCHHHcCCCCCC
Confidence 5678899999999999999999999998877665556554432 23556799999999999999999995
Q ss_pred CHHHHhcCcCCCCCCCCccccccc
Q psy9090 156 YMSELLEHPFITSLPENDLHLSTV 179 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~~~~~ 179 (488)
+++++++||||.+++|........
T Consensus 277 ~~~~~~~hp~f~~~~~~~~~~~~~ 300 (340)
T PTZ00426 277 GAQNVKEHPWFGNIDWVSLLHKNV 300 (340)
T ss_pred CHHHHHcCCCcCCCCHHHHHhCCC
Confidence 899999999999998875544433
No 71
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=4.9e-31 Score=263.71 Aligned_cols=167 Identities=31% Similarity=0.545 Sum_probs=142.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..............||+.|+|||++.+
T Consensus 92 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 169 (323)
T cd05595 92 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-- 169 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccC--
Confidence 578899999999999999999999999999999999999999999999998754332233345679999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..++.++|+|||||++|+|++|+.||...........+..... ..+..+++.+.+||.+||..||.+|+
T Consensus 170 ---~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 243 (323)
T cd05595 170 ---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPS 243 (323)
T ss_pred ---CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHccCCHHHhCCCCCC
Confidence 5688999999999999999999999988776655555544322 23457899999999999999999998
Q ss_pred CHHHHhcCcCCCCCCCCccc
Q psy9090 156 YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~ 175 (488)
++.++++||||.+..|....
T Consensus 244 ~~~~~l~h~~~~~~~~~~~~ 263 (323)
T cd05595 244 DAKEVMEHRFFLSINWQDVV 263 (323)
T ss_pred CHHHHHcCCCcCCCCHHHHH
Confidence 89999999999998876543
No 72
>KOG0695|consensus
Probab=99.97 E-value=3.9e-31 Score=248.56 Aligned_cols=183 Identities=32% Similarity=0.563 Sum_probs=159.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|||+.++++..+|..||.|||++||++||||.+|+|++..|++||+|+|+++..-.+....++++|||.|+|||++++
T Consensus 348 lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrg-- 425 (593)
T KOG0695|consen 348 LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG-- 425 (593)
T ss_pred CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcc--
Confidence 689999999999999999999999999999999999999999999999999987766788899999999999999998
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCC-------CCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFE-------DMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEH 153 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 153 (488)
..|+.++|+|+|||+++||+.|+.||. +.+....+++++-... ...|..+|-.+..+++..|.+||.+
T Consensus 426 ---eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq--iriprslsvkas~vlkgflnkdp~e 500 (593)
T KOG0695|consen 426 ---EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ--IRIPRSLSVKASHVLKGFLNKDPKE 500 (593)
T ss_pred ---cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc--ccccceeehhhHHHHHHhhcCCcHH
Confidence 789999999999999999999999994 2333455666654332 2345667888889999999999999
Q ss_pred CC------CHHHHhcCcCCCCCCCCcccccccccccccchhhh
Q psy9090 154 RP------YMSELLEHPFITSLPENDLHLSTVNCQYKDQELQT 190 (488)
Q Consensus 154 Rp------s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~~~ 190 (488)
|. .+.++..|+||+.++|+.+..+.+.++|+++-...
T Consensus 501 rlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d 543 (593)
T KOG0695|consen 501 RLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDD 543 (593)
T ss_pred hcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccccc
Confidence 96 36899999999999999999999999998764433
No 73
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=5e-31 Score=264.10 Aligned_cols=178 Identities=33% Similarity=0.572 Sum_probs=143.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||+.|+|||++.+
T Consensus 93 l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (327)
T cd05617 93 LPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG-- 170 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCC--
Confidence 578899999999999999999999999999999999999999999999998754332233455679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCC------ChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDM------HPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
..++.++|+|||||++|+|++|..||... .......+....... ..+..++..+.++|.+||..||.+|
T Consensus 171 ---~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R 245 (327)
T cd05617 171 ---EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI--RIPRFLSVKASHVLKGFLNKDPKER 245 (327)
T ss_pred ---CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHhccCHHHc
Confidence 56889999999999999999999999532 222333333333222 2456689999999999999999999
Q ss_pred CC------HHHHhcCcCCCCCCCCccccccccccccc
Q psy9090 155 PY------MSELLEHPFITSLPENDLHLSTVNCQYKD 185 (488)
Q Consensus 155 ps------~~ell~hp~f~~~~~~~~~~~~~~~~~~~ 185 (488)
++ ++++++||||+.++|+.+......+++.+
T Consensus 246 ~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~ 282 (327)
T cd05617 246 LGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKP 282 (327)
T ss_pred CCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccC
Confidence 97 57999999999999886655544444433
No 74
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=8.6e-31 Score=257.56 Aligned_cols=162 Identities=23% Similarity=0.482 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.............+++.|+|||++.+.
T Consensus 100 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 178 (288)
T cd07871 100 MSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS- 178 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCC-
Confidence 4678899999999999999999999999999999999999999999999987654332333455789999999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CCCC------------------------CCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PPPG------------------------LYRAS 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~~~------------------------~~~~~ 133 (488)
..++.++|+||+||++|+|++|++||.+....+.+..+... +.+. .....
T Consensus 179 ---~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (288)
T cd07871 179 ---TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAP 255 (288)
T ss_pred ---cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCC
Confidence 45788999999999999999999999887765554444321 0000 00012
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
..++++++||.+||..||.+|||++++++||||
T Consensus 256 ~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 256 RLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 357889999999999999999999999999998
No 75
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=1.1e-30 Score=261.19 Aligned_cols=167 Identities=31% Similarity=0.553 Sum_probs=142.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|++.+++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++.............|++.|+|||++.+
T Consensus 98 l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-- 175 (324)
T cd05589 98 FSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTE-- 175 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcC--
Confidence 578899999999999999999999999999999999999999999999998754333233456679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..++.++|+|||||++|+|++|..||.+.........+..... ..+..+++.+.++|.+||..||.+||
T Consensus 176 ---~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 249 (324)
T cd05589 176 ---TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV---RYPRFLSREAISIMRRLLRRNPERRLGSGEK 249 (324)
T ss_pred ---CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCC
Confidence 5688899999999999999999999998877666665554322 23456799999999999999999999
Q ss_pred CHHHHhcCcCCCCCCCCccc
Q psy9090 156 YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~ 175 (488)
++.++++||||+.+.+....
T Consensus 250 ~~~~l~~~~~f~~~~~~~~~ 269 (324)
T cd05589 250 DAEDVKKQPFFRDINWDDLL 269 (324)
T ss_pred CHHHHhhCCCcCCCCHHHHH
Confidence 68999999999988766543
No 76
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=8.9e-31 Score=262.54 Aligned_cols=163 Identities=26% Similarity=0.521 Sum_probs=140.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... ......||+.|+|||++.+
T Consensus 115 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~-- 189 (329)
T PTZ00263 115 FPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD---RTFTLCGTPEYLAPEVIQS-- 189 (329)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC---CcceecCChhhcCHHHHcC--
Confidence 47888999999999999999999999999999999999999999999999876543 2234679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY---- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps---- 156 (488)
..++.++|||||||++|+|++|..||.+.........+..... ..+..++..+++||.+||..||.+||+
T Consensus 190 ---~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 263 (329)
T PTZ00263 190 ---KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL---KFPNWFDGRARDLVKGLLQTDHTKRLGTLKG 263 (329)
T ss_pred ---CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCC
Confidence 5678899999999999999999999988776665555554322 234557899999999999999999996
Q ss_pred -HHHHhcCcCCCCCCCCcc
Q psy9090 157 -MSELLEHPFITSLPENDL 174 (488)
Q Consensus 157 -~~ell~hp~f~~~~~~~~ 174 (488)
+++++.||||++..|..+
T Consensus 264 ~~~~ll~hp~f~~~~~~~~ 282 (329)
T PTZ00263 264 GVADVKNHPYFHGANWDKL 282 (329)
T ss_pred CHHHHhcCCccCCCCHHHH
Confidence 799999999998877654
No 77
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=1e-30 Score=255.90 Aligned_cols=172 Identities=31% Similarity=0.508 Sum_probs=138.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++..............||+.|+|||++.+
T Consensus 94 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-- 171 (280)
T cd05608 94 FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQG-- 171 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcC--
Confidence 578899999999999999999999999999999999999999999999998765443333345678999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC-CCCCCCCCCcCHHHHHHHHHhcccCCCCCC----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP-PPGLYRASNWSQHYVDFIAECLEKNPEHRP---- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp---- 155 (488)
..++.++|+||+||++|+|++|+.||................ ......+..+++.+.+++.+||..||++||
T Consensus 172 ---~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 248 (280)
T cd05608 172 ---EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRD 248 (280)
T ss_pred ---CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCC
Confidence 568889999999999999999999997654321111111111 112223456899999999999999999999
Q ss_pred -CHHHHhcCcCCCCCCCCccccc
Q psy9090 156 -YMSELLEHPFITSLPENDLHLS 177 (488)
Q Consensus 156 -s~~ell~hp~f~~~~~~~~~~~ 177 (488)
+++++++||||++..|..+...
T Consensus 249 ~~~~~~l~h~~~~~~~~~~~~~~ 271 (280)
T cd05608 249 GNCDGLRTHPLFRDLNWRQLEAG 271 (280)
T ss_pred CCHHHHhcChhhhcCCHhHHhhc
Confidence 7899999999999887755333
No 78
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=1.2e-30 Score=256.38 Aligned_cols=160 Identities=26% Similarity=0.451 Sum_probs=133.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+
T Consensus 107 ~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-- 183 (290)
T cd07862 107 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQ-- 183 (290)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC-cccccccccccccChHHHhC--
Confidence 467899999999999999999999999999999999999999999999998765433 33345578999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC---CCC---------------------CCCCCcC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP---PGL---------------------YRASNWS 136 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~---~~~---------------------~~~~~~s 136 (488)
..++.++||||+||++|+|++|.+||.+......+..+..... +.. .....++
T Consensus 184 ---~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (290)
T cd07862 184 ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID 260 (290)
T ss_pred ---CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCC
Confidence 5688899999999999999999999998876666555543210 000 0012457
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 137 QHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 137 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
+.+++|+.+||..||++|||+.++++||||
T Consensus 261 ~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 261 ELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 788999999999999999999999999998
No 79
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=8.7e-31 Score=261.34 Aligned_cols=171 Identities=32% Similarity=0.541 Sum_probs=143.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||+.|+|||++.+
T Consensus 93 l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-- 170 (318)
T cd05570 93 FDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSY-- 170 (318)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcC--
Confidence 578899999999999999999999999999999999999999999999998753332233345579999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|+||+||++|+|++|..||.+.........+.... . ..+..++..+.+||++||..||.+|||+
T Consensus 171 ---~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~-~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~ 244 (318)
T cd05570 171 ---QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE-V--RYPRWLSKEAKSILKSFLTKNPEKRLGCLPT 244 (318)
T ss_pred ---CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-C--CCCCcCCHHHHHHHHHHccCCHHHcCCCCCC
Confidence 568899999999999999999999998877655555544332 1 2345679999999999999999999999
Q ss_pred --HHHhcCcCCCCCCCCccccccc
Q psy9090 158 --SELLEHPFITSLPENDLHLSTV 179 (488)
Q Consensus 158 --~ell~hp~f~~~~~~~~~~~~~ 179 (488)
.+++.||||+...|........
T Consensus 245 ~~~~ll~~~~~~~~~~~~~~~~~~ 268 (318)
T cd05570 245 GEQDIKGHPFFREIDWDKLERKEI 268 (318)
T ss_pred CHHHHhcCCCcCCCCHHHHHhCCC
Confidence 9999999999988765433333
No 80
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=1.4e-30 Score=260.43 Aligned_cols=167 Identities=31% Similarity=0.532 Sum_probs=142.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 174 (323)
T cd05584 97 FMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMR-- 174 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccC--
Confidence 467889999999999999999999999999999999999999999999998754333233445679999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..++.++|||||||++|+|++|+.||...........+..... ..+..+++.+.+||.+||..+|++||
T Consensus 175 ---~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 248 (323)
T cd05584 175 ---SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL---NLPPYLTPEARDLLKKLLKRNPSSRLGAGPG 248 (323)
T ss_pred ---CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHcccCHhHcCCCCCC
Confidence 5678899999999999999999999998877666666655432 23556799999999999999999999
Q ss_pred CHHHHhcCcCCCCCCCCccc
Q psy9090 156 YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~ 175 (488)
++.++++||||....|..+.
T Consensus 249 ~~~~l~~h~~~~~~~~~~~~ 268 (323)
T cd05584 249 DAAEVQSHPFFRHVNWDDLL 268 (323)
T ss_pred CHHHHhcCCCcCCCCHHHHh
Confidence 89999999999988776543
No 81
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=5.9e-31 Score=263.32 Aligned_cols=167 Identities=30% Similarity=0.549 Sum_probs=140.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 92 l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~- 170 (325)
T cd05594 92 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED- 170 (325)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHcc-
Confidence 5788999999999999999997 79999999999999999999999999998754332233345679999999999976
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC----
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP---- 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp---- 155 (488)
..++.++|||||||++|+|++|..||.+.........+.... ...+..+++++.+||.+||..||++|+
T Consensus 171 ----~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (325)
T cd05594 171 ----NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGP 243 (325)
T ss_pred ----CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCC
Confidence 568899999999999999999999998877655544443322 223456799999999999999999997
Q ss_pred -CHHHHhcCcCCCCCCCCccc
Q psy9090 156 -YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 -s~~ell~hp~f~~~~~~~~~ 175 (488)
++.++++||||....|....
T Consensus 244 ~~~~~il~h~~~~~~~~~~~~ 264 (325)
T cd05594 244 DDAKEIMQHKFFAGIVWQDVY 264 (325)
T ss_pred CCHHHHhcCCCcCCCCHHHHH
Confidence 89999999999998776543
No 82
>KOG4717|consensus
Probab=99.97 E-value=1.6e-30 Score=256.10 Aligned_cols=163 Identities=30% Similarity=0.524 Sum_probs=145.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEE-ccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLL-TKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl-~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
|+|+.++.|++||+.|+.|||+..+|||||||+|+.+ .+-|-|||.|||++..+.+. ....+.||+..|.|||++.+
T Consensus 115 l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG-~kL~TsCGSLAYSAPEILLG- 192 (864)
T KOG4717|consen 115 LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG-KKLTTSCGSLAYSAPEILLG- 192 (864)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc-chhhcccchhhccCchhhhc-
Confidence 5789999999999999999999999999999999876 56789999999999888765 66788999999999999998
Q ss_pred ccCCCCCC-CccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYD-NRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~-~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..|+ +++||||||||||-|+||++||...+..+.+..|+.- ....|...|.++++||..||..||.+|.|.+
T Consensus 193 ----DsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC---KYtvPshvS~eCrdLI~sMLvRdPkkRAslE 265 (864)
T KOG4717|consen 193 ----DSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC---KYTVPSHVSKECRDLIQSMLVRDPKKRASLE 265 (864)
T ss_pred ----CccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc---cccCchhhhHHHHHHHHHHHhcCchhhccHH
Confidence 5565 6899999999999999999999988888877777643 2335677899999999999999999999999
Q ss_pred HHhcCcCCCCCCCC
Q psy9090 159 ELLEHPFITSLPEN 172 (488)
Q Consensus 159 ell~hp~f~~~~~~ 172 (488)
+|..++|++..+..
T Consensus 266 eI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 266 EIVSTSWLQAGDRG 279 (864)
T ss_pred HHhccccccCCCCC
Confidence 99999999987654
No 83
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=1.1e-30 Score=260.36 Aligned_cols=170 Identities=29% Similarity=0.526 Sum_probs=141.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 93 ~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (316)
T cd05619 93 FDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLG-- 170 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcC--
Confidence 467889999999999999999999999999999999999999999999998754322233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH-H
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS-E 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~-e 159 (488)
..++.++|+||+||++|+|++|..||.+.........+.... +. .+..++.+++++|.+||..+|++||++. +
T Consensus 171 ---~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~-~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 244 (316)
T cd05619 171 ---QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN-PC--YPRWLTREAKDILVKLFVREPERRLGVKGD 244 (316)
T ss_pred ---CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CC--CCccCCHHHHHHHHHHhccCHhhcCCChHH
Confidence 568899999999999999999999998877655554443322 22 2345789999999999999999999996 8
Q ss_pred HhcCcCCCCCCCCcccccc
Q psy9090 160 LLEHPFITSLPENDLHLST 178 (488)
Q Consensus 160 ll~hp~f~~~~~~~~~~~~ 178 (488)
+++||||+.+.|..+....
T Consensus 245 l~~h~~~~~~~~~~~~~~~ 263 (316)
T cd05619 245 IRQHPFFREIDWSALEERE 263 (316)
T ss_pred HHcCcccCCCCHHHHHhCC
Confidence 9999999998886554333
No 84
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=1.1e-30 Score=261.95 Aligned_cols=169 Identities=32% Similarity=0.575 Sum_probs=138.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++||||||+|||++.++.+||+|||+++............+||+.|+|||++.+
T Consensus 93 l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (329)
T cd05588 93 LPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRG-- 170 (329)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcC--
Confidence 578999999999999999999999999999999999999999999999998753332233455689999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC--------hHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMH--------PTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~--------~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
..++.++|+||+||++|+|++|+.||.... ......+.+..... ..+..++..+.++|.+||..||.
T Consensus 171 ---~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~ 245 (329)
T cd05588 171 ---EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKASSVLKGFLNKDPK 245 (329)
T ss_pred ---CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhccCHH
Confidence 568899999999999999999999995311 11223333333222 23556799999999999999999
Q ss_pred CCCC------HHHHhcCcCCCCCCCCcccc
Q psy9090 153 HRPY------MSELLEHPFITSLPENDLHL 176 (488)
Q Consensus 153 ~Rps------~~ell~hp~f~~~~~~~~~~ 176 (488)
+|+| ++++++||||..++|.....
T Consensus 246 ~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~ 275 (329)
T cd05588 246 ERLGCHPQTGFRDIKSHPFFRNIDWDLLEQ 275 (329)
T ss_pred HcCCCCCCCCHHHHhcCCCCCCCCHHHHHh
Confidence 9987 78999999999988765443
No 85
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=1.1e-30 Score=271.70 Aligned_cols=167 Identities=23% Similarity=0.449 Sum_probs=135.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-cEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-EVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++..... .......||+.|+|||++.+.
T Consensus 167 l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~-~~~~~~~~t~~y~aPE~~~~~ 245 (440)
T PTZ00036 167 LPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG-QRSVSYICSRFYRAPELMLGA 245 (440)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCC-CCcccCCCCcCccCHHHhcCC
Confidence 46788999999999999999999999999999999999665 6999999999865433 233455789999999998652
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC---C----------------CCC-------CCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP---P----------------PGL-------YRAS 133 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~---~----------------~~~-------~~~~ 133 (488)
..|+.++||||+||++|+|++|.+||.+......+.++.... . +.. ..+.
T Consensus 246 ----~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 321 (440)
T PTZ00036 246 ----TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPK 321 (440)
T ss_pred ----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhcc
Confidence 468899999999999999999999998877655555443210 0 000 0122
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
..++++++||.+||..||.+|||+.++++||||..+...
T Consensus 322 ~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 322 GTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP 360 (440)
T ss_pred CCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence 457889999999999999999999999999999887554
No 86
>KOG0612|consensus
Probab=99.97 E-value=7.2e-31 Score=279.39 Aligned_cols=176 Identities=24% Similarity=0.426 Sum_probs=148.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccc-ccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETAN-TFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~-~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+||+.+++|+..|+.||.-||+.|+|||||||+|||++..|+|||+|||.|-.... +.-.....+|||.|++||+++..
T Consensus 172 ~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~ 251 (1317)
T KOG0612|consen 172 LPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQ 251 (1317)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhh
Confidence 68999999999999999999999999999999999999999999999999877663 33455677999999999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC-CCCCCCCCCcCHHHHHHHHHhcccCCCCCCC--
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP-PPGLYRASNWSQHYVDFIAECLEKNPEHRPY-- 156 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps-- 156 (488)
......|++.||+||+||++|||+.|..||......+..-+|.... .-.++....+|+++++||.++|. +|+.|..
T Consensus 252 ~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrn 330 (1317)
T KOG0612|consen 252 GDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRN 330 (1317)
T ss_pred cCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcccc
Confidence 4444779999999999999999999999999887766666666432 11222235689999999999985 5889988
Q ss_pred -HHHHhcCcCCCCCCCCccccc
Q psy9090 157 -MSELLEHPFITSLPENDLHLS 177 (488)
Q Consensus 157 -~~ell~hp~f~~~~~~~~~~~ 177 (488)
++++..||||.+++|+.+...
T Consensus 331 giedik~HpFF~g~~W~~iR~~ 352 (1317)
T KOG0612|consen 331 GIEDIKNHPFFEGIDWDNIRES 352 (1317)
T ss_pred cHHHHHhCccccCCChhhhhhc
Confidence 999999999999999765433
No 87
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=5.2e-31 Score=264.24 Aligned_cols=171 Identities=29% Similarity=0.520 Sum_probs=141.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.............+||+.|+|||++.+.
T Consensus 93 ~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~- 171 (330)
T cd05586 93 FSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDE- 171 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCC-
Confidence 5788999999999999999999999999999999999999999999999987543332334456799999999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC----C
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----Y 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----s 156 (488)
..++.++|||||||++|+|++|..||...........+..... .. ....+++.+++||++||..||.+|| +
T Consensus 172 ---~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~ 246 (330)
T cd05586 172 ---KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV-RF-PKNVLSDEGRQFVKGLLNRNPQHRLGAHRD 246 (330)
T ss_pred ---CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC-CC-CCccCCHHHHHHHHHHcCCCHHHCCCCCCC
Confidence 3578899999999999999999999988776555555543322 11 2234689999999999999999998 6
Q ss_pred HHHHhcCcCCCCCCCCccccc
Q psy9090 157 MSELLEHPFITSLPENDLHLS 177 (488)
Q Consensus 157 ~~ell~hp~f~~~~~~~~~~~ 177 (488)
+.++++||||....|......
T Consensus 247 ~~~ll~h~~~~~~~~~~~~~~ 267 (330)
T cd05586 247 AVELKEHPFFADIDWDLLSKK 267 (330)
T ss_pred HHHHhcCccccCCCHHHHHhC
Confidence 899999999998877654433
No 88
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=1.4e-30 Score=261.15 Aligned_cols=176 Identities=30% Similarity=0.561 Sum_probs=140.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 93 l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (329)
T cd05618 93 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG-- 170 (329)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcC--
Confidence 578899999999999999999999999999999999999999999999998754333233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCC--------ChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDM--------HPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
..++.++|+|||||++|+|++|..||... .......+....... ..+...+..+.++|++||..||.
T Consensus 171 ---~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~ll~~~L~~dP~ 245 (329)
T cd05618 171 ---EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKAASVLKSFLNKDPK 245 (329)
T ss_pred ---CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHhcCCHH
Confidence 56888999999999999999999999521 111222232222222 23556789999999999999999
Q ss_pred CCCC------HHHHhcCcCCCCCCCCccccccccccc
Q psy9090 153 HRPY------MSELLEHPFITSLPENDLHLSTVNCQY 183 (488)
Q Consensus 153 ~Rps------~~ell~hp~f~~~~~~~~~~~~~~~~~ 183 (488)
+||+ +.++++||||+.++|.........+++
T Consensus 246 ~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~ 282 (329)
T cd05618 246 ERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPF 282 (329)
T ss_pred HcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCc
Confidence 9998 589999999999888755444443333
No 89
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=2.2e-30 Score=259.04 Aligned_cols=176 Identities=29% Similarity=0.525 Sum_probs=147.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 98 l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 175 (323)
T cd05615 98 FKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAY-- 175 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcC--
Confidence 578999999999999999999999999999999999999999999999998754333233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY---- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps---- 156 (488)
..++.++|+||+||++|+|++|.+||.+.........+..... ..+..++..+.+++.+||..+|.+|++
T Consensus 176 ---~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~ 249 (323)
T cd05615 176 ---QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV---SYPKSLSKEAVSICKGLMTKHPSKRLGCGPE 249 (323)
T ss_pred ---CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---CCCccCCHHHHHHHHHHcccCHhhCCCCCCC
Confidence 5688999999999999999999999998877666666654332 234567899999999999999999997
Q ss_pred -HHHHhcCcCCCCCCCCcccccccccccc
Q psy9090 157 -MSELLEHPFITSLPENDLHLSTVNCQYK 184 (488)
Q Consensus 157 -~~ell~hp~f~~~~~~~~~~~~~~~~~~ 184 (488)
.+++++||||..++|..+......+++.
T Consensus 250 ~~~~i~~h~~f~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05615 250 GERDIREHAFFRRIDWDKLENREIQPPFK 278 (323)
T ss_pred CHHHHhcCcccCCCCHHHHhcCCCCcCcc
Confidence 4789999999999887665544444443
No 90
>KOG0032|consensus
Probab=99.97 E-value=3e-30 Score=260.04 Aligned_cols=164 Identities=32% Similarity=0.560 Sum_probs=144.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC----CcEEEEecCCccccccccCccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD----GEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~----~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l 76 (488)
++|..+..+++||+.+++|||+.||+||||||+|+|+... +.+|++|||++..... .......+|||.|+|||++
T Consensus 132 ~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~-~~~~~~~~Gtp~y~APEvl 210 (382)
T KOG0032|consen 132 YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP-GERLHTIVGTPEYVAPEVL 210 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-CceEeeecCCccccCchhh
Confidence 5899999999999999999999999999999999999643 5799999999998776 4567788999999999999
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
.. .+|+..+||||+|+++|.|++|.+||.+.+.......+..... ........+|..++++|.+||..||.+|+
T Consensus 211 ~~-----~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ 285 (382)
T KOG0032|consen 211 GG-----RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRL 285 (382)
T ss_pred cC-----CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCC
Confidence 76 6899999999999999999999999999998777777776543 12223456699999999999999999999
Q ss_pred CHHHHhcCcCCCCCC
Q psy9090 156 YMSELLEHPFITSLP 170 (488)
Q Consensus 156 s~~ell~hp~f~~~~ 170 (488)
|+.++|+|||++...
T Consensus 286 ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 286 TAAQALQHPWIKSIG 300 (382)
T ss_pred CHHHHhcCccccCCc
Confidence 999999999998753
No 91
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=1.5e-30 Score=260.46 Aligned_cols=170 Identities=28% Similarity=0.491 Sum_probs=143.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||+.|+|||++.+
T Consensus 93 ~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (325)
T cd05602 93 FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHK-- 170 (325)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcC--
Confidence 467889999999999999999999999999999999999999999999998754333233455679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH--
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS-- 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~-- 158 (488)
..++.++|||||||++|+|++|.+||.+.........+...+. ..+..++..+.++|.+||..+|.+|+++.
T Consensus 171 ---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 171 ---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL---QLKPNITNSARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred ---CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc---CCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 5688999999999999999999999998877666666554432 23456899999999999999999999875
Q ss_pred --HHhcCcCCCCCCCCcccccc
Q psy9090 159 --ELLEHPFITSLPENDLHLST 178 (488)
Q Consensus 159 --ell~hp~f~~~~~~~~~~~~ 178 (488)
++++|+||..++|..+....
T Consensus 245 ~~~i~~~~~~~~~~~~~~~~~~ 266 (325)
T cd05602 245 FMEIKNHIFFSPINWDDLINKK 266 (325)
T ss_pred HHHHhcCcccCCCCHHHHHhCC
Confidence 89999999998887654333
No 92
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=3e-30 Score=262.19 Aligned_cols=170 Identities=25% Similarity=0.433 Sum_probs=137.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc----------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---------------------- 58 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---------------------- 58 (488)
+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 98 l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (363)
T cd05628 98 LTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMN 177 (363)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccc
Confidence 5789999999999999999999999999999999999999999999999987542110
Q ss_pred -------------CccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC
Q psy9090 59 -------------DKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP 125 (488)
Q Consensus 59 -------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 125 (488)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+........++....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-----~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~ 252 (363)
T cd05628 178 SKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-----TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWK 252 (363)
T ss_pred cccccchhhhccccccccccCCccccCHHHHcC-----CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCc
Confidence 00124579999999999976 568899999999999999999999999887766666665422
Q ss_pred -CCCCCCCCCcCHHHHHHHHHhcccCCC---CCCCHHHHhcCcCCCCCCCCcccc
Q psy9090 126 -PPGLYRASNWSQHYVDFIAECLEKNPE---HRPYMSELLEHPFITSLPENDLHL 176 (488)
Q Consensus 126 -~~~~~~~~~~s~~~~~li~~~L~~dP~---~Rps~~ell~hp~f~~~~~~~~~~ 176 (488)
....+....++++++++|.+|+. +|. .||+++++++||||++++|+.+..
T Consensus 253 ~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~~~~~ 306 (363)
T cd05628 253 ETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWEHIRE 306 (363)
T ss_pred CcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHHHHHh
Confidence 12222234578999999999875 444 458999999999999999886543
No 93
>KOG0983|consensus
Probab=99.97 E-value=3.5e-30 Score=236.44 Aligned_cols=168 Identities=33% Similarity=0.642 Sum_probs=142.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++|..+-++...++.||.||.. +||+|||+||+|||++..|.|||||||.+-..... .......|-+.|||||.+.-.
T Consensus 188 iPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-kAhtrsAGC~~YMaPERidp~ 266 (391)
T KOG0983|consen 188 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-KAHTRSAGCAAYMAPERIDPP 266 (391)
T ss_pred chHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc-cccccccCCccccCccccCCC
Confidence 4678888999999999999975 68999999999999999999999999999776553 334455788999999998643
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH-PTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
....|+.++||||||+.++||.||+.||.+.+ ..+.+.+++...+|.++....+|+.+++|+..||.+|+.+||...
T Consensus 267 --~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~ 344 (391)
T KOG0983|consen 267 --DKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYN 344 (391)
T ss_pred --CCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchH
Confidence 24679999999999999999999999998754 356666777666666655556999999999999999999999999
Q ss_pred HHhcCcCCCCCCC
Q psy9090 159 ELLEHPFITSLPE 171 (488)
Q Consensus 159 ell~hp~f~~~~~ 171 (488)
++|+|||+.....
T Consensus 345 ~Ll~h~Fi~~ye~ 357 (391)
T KOG0983|consen 345 KLLEHPFIKRYET 357 (391)
T ss_pred HHhcCcceeecch
Confidence 9999999987543
No 94
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=1.4e-30 Score=260.56 Aligned_cols=169 Identities=34% Similarity=0.538 Sum_probs=142.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.+
T Consensus 93 ~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (325)
T cd05604 93 FPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRK-- 170 (325)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcC--
Confidence 578899999999999999999999999999999999999999999999998754333233445679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|||||||++|+|++|.+||...........+..... ..+...+..+.++|.+||..+|.+||++
T Consensus 171 ---~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 171 ---QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL---VLRPGASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred ---CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc---cCCCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 5688899999999999999999999998776666666555432 1234578999999999999999999976
Q ss_pred -HHHhcCcCCCCCCCCccccc
Q psy9090 158 -SELLEHPFITSLPENDLHLS 177 (488)
Q Consensus 158 -~ell~hp~f~~~~~~~~~~~ 177 (488)
.++++||||...+|......
T Consensus 245 ~~~i~~h~~f~~~~~~~~~~~ 265 (325)
T cd05604 245 FLEIQEHPFFESLSWTDLEQK 265 (325)
T ss_pred HHHHhcCCCcCCCCHHHHHhC
Confidence 58999999999887655433
No 95
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=3.1e-30 Score=258.78 Aligned_cols=174 Identities=33% Similarity=0.512 Sum_probs=138.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+.
T Consensus 102 ~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 181 (332)
T cd05614 102 FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGK 181 (332)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCC
Confidence 5788999999999999999999999999999999999999999999999987643321 223356799999999998752
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh---HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP---TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP- 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp- 155 (488)
..++.++|||||||++|+|++|..||..... .......+....+. .+..+++.+.++|.+||..||++||
T Consensus 182 ----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~R~~ 255 (332)
T cd05614 182 ----GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPP--FPSFIGPEAQDLLHKLLRKDPKKRLG 255 (332)
T ss_pred ----CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence 3477899999999999999999999964321 12222222222222 3456799999999999999999999
Q ss_pred ----CHHHHhcCcCCCCCCCCcccccccc
Q psy9090 156 ----YMSELLEHPFITSLPENDLHLSTVN 180 (488)
Q Consensus 156 ----s~~ell~hp~f~~~~~~~~~~~~~~ 180 (488)
+++++++||||+...|.........
T Consensus 256 ~~~~~~~~~l~h~~~~~~~~~~~~~~~~~ 284 (332)
T cd05614 256 AGPQGASEIKEHPFFKGLDWEALALRKVN 284 (332)
T ss_pred CCCCCHHHHHcCCCcCCCCHHHHHhCCCC
Confidence 8899999999998877655443333
No 96
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=3.2e-30 Score=262.62 Aligned_cols=173 Identities=23% Similarity=0.364 Sum_probs=142.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+.
T Consensus 139 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 218 (370)
T cd05596 139 IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQ 218 (370)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccC
Confidence 4788999999999999999999999999999999999999999999999987654321 123456799999999998652
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCCCCCCcCHHHHHHHHHhcccCCCC--CCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLYRASNWSQHYVDFIAECLEKNPEH--RPY 156 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~--Rps 156 (488)
.. ...++.++|+|||||++|+|++|.+||.+.........+..... ...+....+|.++++||.+||..+|.+ |+|
T Consensus 219 ~~-~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s 297 (370)
T cd05596 219 GG-DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNG 297 (370)
T ss_pred CC-CCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCC
Confidence 11 13478899999999999999999999998877666666654322 222233457999999999999999988 999
Q ss_pred HHHHhcCcCCCCCCCCcc
Q psy9090 157 MSELLEHPFITSLPENDL 174 (488)
Q Consensus 157 ~~ell~hp~f~~~~~~~~ 174 (488)
++++++||||+..+|...
T Consensus 298 ~~ell~h~~~~~~~~~~~ 315 (370)
T cd05596 298 VDEIKSHPFFKNDQWTFD 315 (370)
T ss_pred HHHHhcCcccCCCChhhH
Confidence 999999999998777643
No 97
>KOG0595|consensus
Probab=99.97 E-value=2.7e-30 Score=249.74 Aligned_cols=164 Identities=30% Similarity=0.605 Sum_probs=143.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC------CcEEEEecCCccccccccCccccccCCCccccch
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD------GEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPE 74 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~------~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE 74 (488)
++|..++.++.||+.||++||+++||||||||.|||++.+ -.+||+|||+++..... ....+.+|+|.|||||
T Consensus 106 l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~-~~a~tlcGSplYMAPE 184 (429)
T KOG0595|consen 106 LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG-SMAETLCGSPLYMAPE 184 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch-hHHHHhhCCccccCHH
Confidence 6899999999999999999999999999999999999865 45899999999988754 5667889999999999
Q ss_pred hhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 75 IMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 75 ~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
+++. ..|+.|+|+||+|+++|+|++|++||...++.+....+.++.......+...+....+|+...|..+|..|
T Consensus 185 V~~~-----~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~ 259 (429)
T KOG0595|consen 185 VIMS-----QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDR 259 (429)
T ss_pred HHHh-----ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCcccc
Confidence 9976 78999999999999999999999999999988877766554333333344557778899999999999999
Q ss_pred CCHHHHhcCcCCCCCC
Q psy9090 155 PYMSELLEHPFITSLP 170 (488)
Q Consensus 155 ps~~ell~hp~f~~~~ 170 (488)
.+..+-+.|++...-+
T Consensus 260 ~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 260 ISFEDFFDHPFLAANP 275 (429)
T ss_pred CchHHhhhhhhcccCc
Confidence 9999999999997655
No 98
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=4.1e-30 Score=256.76 Aligned_cols=168 Identities=30% Similarity=0.520 Sum_probs=141.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||+++.............||+.|+|||++.+
T Consensus 93 ~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-- 170 (321)
T cd05603 93 FLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRK-- 170 (321)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcC--
Confidence 468889999999999999999999999999999999999999999999998754332233445679999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|+|||||++|+|++|..||...+.......+...+ ...+...+..+.++|.+||..+|.+||++
T Consensus 171 ---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (321)
T cd05603 171 ---EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP---LQLPGGKTVAACDLLVGLLHKDQRRRLGAKAD 244 (321)
T ss_pred ---CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCC
Confidence 568899999999999999999999998887666555555432 22345678999999999999999999875
Q ss_pred -HHHhcCcCCCCCCCCcccc
Q psy9090 158 -SELLEHPFITSLPENDLHL 176 (488)
Q Consensus 158 -~ell~hp~f~~~~~~~~~~ 176 (488)
.++++||||..+.|..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~ 264 (321)
T cd05603 245 FLEIKNHVFFSPINWDDLYH 264 (321)
T ss_pred HHHHhCCCCcCCCCHHHHhc
Confidence 5999999999888765543
No 99
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=6.5e-30 Score=250.77 Aligned_cols=160 Identities=29% Similarity=0.499 Sum_probs=131.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++...... .......||+.|+|||++.+
T Consensus 105 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-- 181 (288)
T cd07863 105 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ-MALTPVVVTLWYRAPEVLLQ-- 181 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCc-ccCCCccccccccCchHhhC--
Confidence 578899999999999999999999999999999999999999999999998765432 22334578999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CC----CC--------C---------CCCCCcC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PP----PG--------L---------YRASNWS 136 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~----~~--------~---------~~~~~~s 136 (488)
..++.++||||+||++|+|++|.+||.+........++... +. +. . .....++
T Consensus 182 ---~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (288)
T cd07863 182 ---STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIE 258 (288)
T ss_pred ---CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcC
Confidence 56889999999999999999999999877665554444321 00 00 0 0112457
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 137 QHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 137 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
..+.++|.+||..||++|||+.+++.||||
T Consensus 259 ~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 259 ESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred HHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 788999999999999999999999999998
No 100
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=2e-30 Score=258.70 Aligned_cols=167 Identities=28% Similarity=0.518 Sum_probs=142.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..............||+.|+|||++.+
T Consensus 95 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-- 172 (318)
T cd05582 95 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR-- 172 (318)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcC--
Confidence 578999999999999999999999999999999999999999999999998765443233445679999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY---- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps---- 156 (488)
..++.++|+|||||++|+|++|+.||...........+..... ..+..+++.+.+||++||..||.+||+
T Consensus 173 ---~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~ 246 (318)
T cd05582 173 ---RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL---GMPQFLSPEAQSLLRALFKRNPANRLGAGPD 246 (318)
T ss_pred ---CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCC
Confidence 5678899999999999999999999988877666666554322 234567999999999999999999999
Q ss_pred -HHHHhcCcCCCCCCCCccc
Q psy9090 157 -MSELLEHPFITSLPENDLH 175 (488)
Q Consensus 157 -~~ell~hp~f~~~~~~~~~ 175 (488)
+.+++.||||..+.|..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~ 266 (318)
T cd05582 247 GVEEIKRHPFFSTIDWNKLY 266 (318)
T ss_pred CHHHHhCCCCcCCCCHHHHH
Confidence 7889999999998776543
No 101
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=5e-30 Score=259.00 Aligned_cols=169 Identities=27% Similarity=0.505 Sum_probs=140.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc----------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---------------------- 58 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---------------------- 58 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 98 l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (350)
T cd05573 98 FPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRR 177 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccc
Confidence 5788999999999999999999999999999999999999999999999987654332
Q ss_pred -------CccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC-CCCCC
Q psy9090 59 -------DKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP-PPGLY 130 (488)
Q Consensus 59 -------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~-~~~~~ 130 (488)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..........++.... ....+
T Consensus 178 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p 252 (350)
T cd05573 178 RDHKQRRVRANSTVGTPDYIAPEVLRG-----TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFP 252 (350)
T ss_pred cccccccccccccccCccccCHHHHcC-----CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCC
Confidence 12334579999999999976 578899999999999999999999998887666555555411 11222
Q ss_pred CCCCcCHHHHHHHHHhcccCCCCCCC-HHHHhcCcCCCCCCCCccc
Q psy9090 131 RASNWSQHYVDFIAECLEKNPEHRPY-MSELLEHPFITSLPENDLH 175 (488)
Q Consensus 131 ~~~~~s~~~~~li~~~L~~dP~~Rps-~~ell~hp~f~~~~~~~~~ 175 (488)
....+++.+.+||.+||. +|.+||+ ++++++||||+.++|+...
T Consensus 253 ~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~~~~~ 297 (350)
T cd05573 253 PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDWENLR 297 (350)
T ss_pred CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCHHHHh
Confidence 233479999999999997 9999999 9999999999998886543
No 102
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.96 E-value=9.1e-30 Score=249.72 Aligned_cols=161 Identities=24% Similarity=0.509 Sum_probs=130.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+
T Consensus 97 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 175 (287)
T cd07848 97 VPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG- 175 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcC-
Confidence 4688899999999999999999999999999999999999999999999997654321 12234578999999999976
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC--CC-------------------CCCCC-------
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN--PP-------------------PGLYR------- 131 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~--~~-------------------~~~~~------- 131 (488)
..++.++|+||+||++|+|++|++||.+.........+... +. +....
T Consensus 176 ----~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T cd07848 176 ----APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERR 251 (287)
T ss_pred ----CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHh
Confidence 56888999999999999999999999877654443332211 00 00000
Q ss_pred -CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 132 -ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 132 -~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
...+|..+.+||++||..||++|||++++++||||
T Consensus 252 ~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 252 YLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 11257889999999999999999999999999998
No 103
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.96 E-value=9e-30 Score=255.69 Aligned_cols=168 Identities=27% Similarity=0.471 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC---ccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD---KKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~l~ 77 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.
T Consensus 100 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 179 (338)
T cd07859 100 LTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 179 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHh
Confidence 57889999999999999999999999999999999999999999999999875432211 123457899999999986
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh--------------------------CCCCC--C
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR--------------------------NPPPG--L 129 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~--------------------------~~~~~--~ 129 (488)
+. ...++.++|||||||++|+|++|++||.+.........+.. ...+. .
T Consensus 180 ~~---~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 256 (338)
T cd07859 180 SF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFS 256 (338)
T ss_pred cc---ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchH
Confidence 41 14578899999999999999999999977654332211110 00000 0
Q ss_pred CCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 130 YRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 130 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
......++.+.++|.+||..||++|||++++++||||+.+..
T Consensus 257 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 257 QKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 011245788899999999999999999999999999987655
No 104
>KOG0574|consensus
Probab=99.96 E-value=3e-31 Score=246.18 Aligned_cols=167 Identities=44% Similarity=0.906 Sum_probs=157.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.++..+++.-+.||+|||...-+|||||..|||++.+|+.||+|||.+-.+........+.+|||.|||||++..
T Consensus 126 L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~E-- 203 (502)
T KOG0574|consen 126 LSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEE-- 203 (502)
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHH--
Confidence 689999999999999999999999999999999999999999999999999888877777889999999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
-+|+.++||||||+...||..|++||.+-.+...++.+-.+++|.+..|..||.++.+++++||.++|++|.|+-++
T Consensus 204 ---IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L 280 (502)
T KOG0574|consen 204 ---IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRL 280 (502)
T ss_pred ---hccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHH
Confidence 67999999999999999999999999999999999999889999998999999999999999999999999999999
Q ss_pred hcCcCCCCCCCC
Q psy9090 161 LEHPFITSLPEN 172 (488)
Q Consensus 161 l~hp~f~~~~~~ 172 (488)
++|||+++.+.-
T Consensus 281 ~~H~FiknA~g~ 292 (502)
T KOG0574|consen 281 CEHTFIKNAPGC 292 (502)
T ss_pred hhhhhhcCCCcc
Confidence 999999986543
No 105
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=9.6e-30 Score=255.39 Aligned_cols=167 Identities=32% Similarity=0.548 Sum_probs=139.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... ......||+.|+|||++.+
T Consensus 98 l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-- 172 (333)
T cd05600 98 LSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YANSVVGSPDYMAPEVLRG-- 172 (333)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccCCcccCccccChhHhcC--
Confidence 57889999999999999999999999999999999999999999999999876543 3345679999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC----CCC-CCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP----PGL-YRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~----~~~-~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
..++.++|||||||++|+|++|..||...........+..... +.. .....+++++.+||.+||..+|.+||
T Consensus 173 ---~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~ 249 (333)
T cd05600 173 ---KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFG 249 (333)
T ss_pred ---CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcC
Confidence 5788999999999999999999999988776655544433211 111 01125689999999999999999999
Q ss_pred CHHHHhcCcCCCCCCCCccc
Q psy9090 156 YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~ 175 (488)
+++++++||||..+++..+.
T Consensus 250 s~~~ll~h~~~~~~~~~~~~ 269 (333)
T cd05600 250 SLEDIKNHPFFKEVDWNELR 269 (333)
T ss_pred CHHHHHhCcccCCCCHHHHh
Confidence 99999999999998776543
No 106
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=1.1e-29 Score=252.10 Aligned_cols=167 Identities=26% Similarity=0.521 Sum_probs=133.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++..............+++.|+|||++.+.
T Consensus 101 ~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 179 (309)
T cd07872 101 MSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS- 179 (309)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCC-
Confidence 4678899999999999999999999999999999999999999999999987654332333445688999999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CC------------------CC------CCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PP------------------PG------LYRAS 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~------------------~~------~~~~~ 133 (488)
..++.++|+||+||++|+|++|++||.+.+.......+.+. +. +. .....
T Consensus 180 ---~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (309)
T cd07872 180 ---SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAP 256 (309)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhcc
Confidence 45788999999999999999999999877654443333221 00 00 00112
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
.+++++++||.+||..||.+|||+.++++||||+....
T Consensus 257 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 294 (309)
T cd07872 257 RLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294 (309)
T ss_pred CCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence 46788999999999999999999999999999997653
No 107
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.96 E-value=1.4e-29 Score=257.78 Aligned_cols=173 Identities=24% Similarity=0.393 Sum_probs=138.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ...+..||+.|+|||++...
T Consensus 139 ~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 218 (370)
T cd05621 139 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQ 218 (370)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhcc
Confidence 47889999999999999999999999999999999999999999999999976543211 23456799999999999752
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCCCCCCcCHHHHHHHHHhcccCCCC--CCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLYRASNWSQHYVDFIAECLEKNPEH--RPY 156 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~--Rps 156 (488)
. ....++.++|+||+||++|+|++|.+||.+........++..... ...+....++..+++++.+||..+|.+ |++
T Consensus 219 ~-~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~ 297 (370)
T cd05621 219 G-GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNG 297 (370)
T ss_pred C-CCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCC
Confidence 1 113478899999999999999999999998877666666654322 222223456999999999999865544 889
Q ss_pred HHHHhcCcCCCCCCCCcc
Q psy9090 157 MSELLEHPFITSLPENDL 174 (488)
Q Consensus 157 ~~ell~hp~f~~~~~~~~ 174 (488)
+.++++||||+...|...
T Consensus 298 ~~e~l~hp~~~~~~~~~~ 315 (370)
T cd05621 298 VEEIKQHPFFKNDQWNWD 315 (370)
T ss_pred HHHHhcCcccCCCCcChH
Confidence 999999999998666533
No 108
>KOG0580|consensus
Probab=99.96 E-value=4.1e-30 Score=232.22 Aligned_cols=158 Identities=34% Similarity=0.594 Sum_probs=141.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++|..++.+++|++.||.|||.++++||||||+|+|++..|.+|++|||.+.... .....+.+||..|.|||...+
T Consensus 121 f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p--~~kR~tlcgt~dyl~pEmv~~-- 196 (281)
T KOG0580|consen 121 FDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SNKRKTLCGTLDYLPPEMVEG-- 196 (281)
T ss_pred ccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC--CCCceeeecccccCCHhhcCC--
Confidence 4678899999999999999999999999999999999999999999999987654 356678899999999999987
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++..+|+|++|++.||++.|.+||......+...++.+- ....|..++..+.|||.+||..+|.+|.+..++
T Consensus 197 ---~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~---~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v 270 (281)
T KOG0580|consen 197 ---RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV---DLKFPSTISGGAADLISRLLVKNPIERLALTEV 270 (281)
T ss_pred ---CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc---cccCCcccChhHHHHHHHHhccCccccccHHHH
Confidence 67899999999999999999999999988866666666543 233457889999999999999999999999999
Q ss_pred hcCcCCCC
Q psy9090 161 LEHPFITS 168 (488)
Q Consensus 161 l~hp~f~~ 168 (488)
+.|||+..
T Consensus 271 ~~hpwI~a 278 (281)
T KOG0580|consen 271 MDHPWIVA 278 (281)
T ss_pred hhhHHHHh
Confidence 99999864
No 109
>KOG0603|consensus
Probab=99.96 E-value=7.5e-30 Score=259.35 Aligned_cols=153 Identities=25% Similarity=0.423 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEE-ccCCcEEEEecCCccccccccCccccccCCCccccchhhcccccC
Q psy9090 4 QHIAFILKEIITGMVFLHENHVIHRDLRGSNVLL-TKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHKE 82 (488)
Q Consensus 4 ~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl-~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~ 82 (488)
.++..|++||+.|+.|||++|+|||||||+|||+ +..|+++|+|||.++..... ..+.+-|..|.|||++..
T Consensus 415 ~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---~~tp~~t~~y~APEvl~~---- 487 (612)
T KOG0603|consen 415 SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---CDTPALTLQYVAPEVLAI---- 487 (612)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh---hcccchhhcccChhhhcc----
Confidence 4677899999999999999999999999999999 69999999999999876543 445567889999999974
Q ss_pred CCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhc
Q psy9090 83 VDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSELLE 162 (488)
Q Consensus 83 ~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 162 (488)
..|+++|||||||++||+|++|+.||........+...+..+.. ...+|..+++||++||+.||.+||++.+++.
T Consensus 488 -~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~----s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 488 -QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKF----SECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCcc----ccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 78999999999999999999999999766544333333332211 2677999999999999999999999999999
Q ss_pred CcCCCC
Q psy9090 163 HPFITS 168 (488)
Q Consensus 163 hp~f~~ 168 (488)
||||.+
T Consensus 563 h~w~~~ 568 (612)
T KOG0603|consen 563 HPWFLS 568 (612)
T ss_pred Ccchhc
Confidence 999933
No 110
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=6e-30 Score=256.49 Aligned_cols=174 Identities=25% Similarity=0.455 Sum_probs=141.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ ......||+.|+|||++...
T Consensus 99 l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (330)
T cd05601 99 FDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTM 178 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccc
Confidence 57889999999999999999999999999999999999999999999999976543211 22334789999999998642
Q ss_pred ccC-CCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 80 HKE-VDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 80 ~~~-~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
... ...++.++|||||||++|+|++|..||..........++..... ...+....+++.+.+||.+||. +|.+|||+
T Consensus 179 ~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~ 257 (330)
T cd05601 179 NGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGY 257 (330)
T ss_pred cccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCH
Confidence 221 25678899999999999999999999988776666666554322 1222334679999999999997 99999999
Q ss_pred HHHhcCcCCCCCCCCccc
Q psy9090 158 SELLEHPFITSLPENDLH 175 (488)
Q Consensus 158 ~ell~hp~f~~~~~~~~~ 175 (488)
++++.||||..++|..+.
T Consensus 258 ~~l~~h~~~~~~~~~~~~ 275 (330)
T cd05601 258 EGLCCHPFFSKIDWNNIR 275 (330)
T ss_pred HHHhCCCCcCCCCHHHHh
Confidence 999999999998876543
No 111
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.96 E-value=6.7e-30 Score=259.37 Aligned_cols=170 Identities=26% Similarity=0.460 Sum_probs=138.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc----------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---------------------- 58 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---------------------- 58 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||+++......
T Consensus 98 l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (360)
T cd05627 98 LSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMN 177 (360)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccc
Confidence 5788999999999999999999999999999999999999999999999986432110
Q ss_pred -------------CccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC
Q psy9090 59 -------------DKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP 125 (488)
Q Consensus 59 -------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 125 (488)
......+||+.|+|||++.+ ..++.++|+|||||++|+|++|.+||.+..+.....++....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~ 252 (360)
T cd05627 178 SKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-----TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWK 252 (360)
T ss_pred cccccccccccccccccccCCCccccCHHHHcC-----CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCC
Confidence 01124579999999999976 678899999999999999999999999888766665555322
Q ss_pred C-CCCCCCCCcCHHHHHHHHHhcccCCCCCC---CHHHHhcCcCCCCCCCCcccc
Q psy9090 126 P-PGLYRASNWSQHYVDFIAECLEKNPEHRP---YMSELLEHPFITSLPENDLHL 176 (488)
Q Consensus 126 ~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rp---s~~ell~hp~f~~~~~~~~~~ 176 (488)
. ...+....+++.+++||.+|+ .+|.+|+ ++.++++||||..++|..+..
T Consensus 253 ~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~ 306 (360)
T cd05627 253 ETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVDWGHIRE 306 (360)
T ss_pred CceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCCHHHHhc
Confidence 1 122223347899999999987 4999998 489999999999999876543
No 112
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=1.2e-29 Score=257.84 Aligned_cols=168 Identities=27% Similarity=0.472 Sum_probs=138.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC---------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--------------------- 59 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--------------------- 59 (488)
|++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 98 l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (364)
T cd05599 98 FTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISK 177 (364)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccc
Confidence 57899999999999999999999999999999999999999999999999865421100
Q ss_pred -----------------ccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHH
Q psy9090 60 -----------------KKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIV 122 (488)
Q Consensus 60 -----------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~ 122 (488)
.....+||+.|+|||++.. ..++.++|||||||++|+|++|.+||.+.........+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~ 252 (364)
T cd05599 178 PMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-----TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKII 252 (364)
T ss_pred cccccccccchhhcccccccccccCccccCHHHHcC-----CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHH
Confidence 0113469999999999875 568899999999999999999999999887766655555
Q ss_pred hCCC-CCCCCCCCcCHHHHHHHHHhcccCCCCCCC---HHHHhcCcCCCCCCCCcc
Q psy9090 123 RNPP-PGLYRASNWSQHYVDFIAECLEKNPEHRPY---MSELLEHPFITSLPENDL 174 (488)
Q Consensus 123 ~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rps---~~ell~hp~f~~~~~~~~ 174 (488)
.... ...+....+++.+++||.+||. +|.+|++ +.++++||||+..+|..+
T Consensus 253 ~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~~~~ 307 (364)
T cd05599 253 NWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEHI 307 (364)
T ss_pred cCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 4221 1222233578999999999996 8999997 999999999999887643
No 113
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=1.5e-29 Score=256.66 Aligned_cols=162 Identities=27% Similarity=0.522 Sum_probs=129.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+
T Consensus 120 ~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~-- 196 (359)
T cd07876 120 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-FMMTPYVVTRYYRAPEVILG-- 196 (359)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC-ccCCCCcccCCCCCchhccC--
Confidence 467889999999999999999999999999999999999999999999998754332 22344578999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---------------------CCCCCC---------
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---------------------PPPGLY--------- 130 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---------------------~~~~~~--------- 130 (488)
..++.++|||||||++|+|++|+.||.+.+.......+... ..+...
T Consensus 197 ---~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (359)
T cd07876 197 ---MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFP 273 (359)
T ss_pred ---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcc
Confidence 56889999999999999999999999876544332222110 000000
Q ss_pred ---------CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCC
Q psy9090 131 ---------RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITS 168 (488)
Q Consensus 131 ---------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 168 (488)
.....++.+++||.+||..||++|||+.++++||||..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 274 DWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred ccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 01123577899999999999999999999999999974
No 114
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=1.9e-29 Score=255.54 Aligned_cols=163 Identities=25% Similarity=0.469 Sum_probs=130.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+
T Consensus 116 l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-- 192 (355)
T cd07874 116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILG-- 192 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc-cccCCccccCCccCHHHHcC--
Confidence 467889999999999999999999999999999999999999999999999765432 22345578999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC---------------------CC-----------
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP---------------------PG----------- 128 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~---------------------~~----------- 128 (488)
..++.++|+|||||++|+|++|+.||.+..........+.... +.
T Consensus 193 ---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (355)
T cd07874 193 ---MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP 269 (355)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcc
Confidence 5688999999999999999999999987664443332221100 00
Q ss_pred -------CCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 129 -------LYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 129 -------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
.......+..+++||.+||..||++|||+.++++||||...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 270 DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred ccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 00011235678999999999999999999999999999743
No 115
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96 E-value=2.2e-29 Score=250.75 Aligned_cols=162 Identities=26% Similarity=0.472 Sum_probs=123.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEE----ccCCcEEEEecCCcccccccc---CccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLL----TKDGEVKIVDFGLSRETANTF---DKKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl----~~~~~vkL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aP 73 (488)
+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++...... .......||+.|+||
T Consensus 105 l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aP 184 (317)
T cd07868 105 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184 (317)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCC
Confidence 4678899999999999999999999999999999999 456789999999997654321 122356789999999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh---------HHHHHHHHh---CCC----------CC---
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP---------TRALFQIVR---NPP----------PG--- 128 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~---------~~~~~~~~~---~~~----------~~--- 128 (488)
|++.+. ..++.++|+||+||++|+|++|.+||..... ...+..+.. .+. +.
T Consensus 185 E~~~~~----~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (317)
T cd07868 185 ELLLGA----RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHST 260 (317)
T ss_pred HHHcCC----CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhh
Confidence 998752 4578899999999999999999999964331 111111111 000 00
Q ss_pred --------CC-----------CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 129 --------LY-----------RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 129 --------~~-----------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.. .....+..+.+||.+||..||.+|||++++|+||||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 261 LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 001224678899999999999999999999999998
No 116
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96 E-value=4e-29 Score=244.65 Aligned_cols=169 Identities=41% Similarity=0.862 Sum_probs=141.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||+.|++||||||+||+++.++.++|+|||++..............+++.|+|||++....
T Consensus 100 l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 179 (282)
T cd06643 100 LTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 179 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccC
Confidence 47889999999999999999999999999999999999999999999999876543323334557899999999986432
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....++.++|+||+||++|+|++|.+||...........+.....+....+..++..++++|.+||..+|.+||++.++
T Consensus 180 ~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 259 (282)
T cd06643 180 SKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQL 259 (282)
T ss_pred CCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 22356788999999999999999999999887766666666554444444556789999999999999999999999999
Q ss_pred hcCcCCCCC
Q psy9090 161 LEHPFITSL 169 (488)
Q Consensus 161 l~hp~f~~~ 169 (488)
++||||+..
T Consensus 260 l~~~~~~~~ 268 (282)
T cd06643 260 LQHPFVTVN 268 (282)
T ss_pred hcCCCEecc
Confidence 999999864
No 117
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=1.7e-29 Score=258.57 Aligned_cols=167 Identities=26% Similarity=0.505 Sum_probs=136.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc-----------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT----------------------- 57 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~----------------------- 57 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 98 ~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (382)
T cd05625 98 FPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEW 177 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccc
Confidence 478899999999999999999999999999999999999999999999997532100
Q ss_pred ------------------------cCccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC
Q psy9090 58 ------------------------FDKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH 113 (488)
Q Consensus 58 ------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~ 113 (488)
.......+||+.|+|||++.+ ..|+.++|||||||++|+|++|++||.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 252 (382)
T cd05625 178 GDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-----TGYTQLCDWWSVGVILYEMLVGQPPFLAQT 252 (382)
T ss_pred cccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-----CCCCCeeeEEechHHHHHHHhCCCCCCCCC
Confidence 000123579999999999976 578899999999999999999999999887
Q ss_pred hHHHHHHHHhCC-CCCCCCCCCcCHHHHHHHHHhcccCCCCCCC---HHHHhcCcCCCCCCCCc
Q psy9090 114 PTRALFQIVRNP-PPGLYRASNWSQHYVDFIAECLEKNPEHRPY---MSELLEHPFITSLPEND 173 (488)
Q Consensus 114 ~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps---~~ell~hp~f~~~~~~~ 173 (488)
+......+.... ....+....+++++.++|.+|+ .+|.+|++ ++++++||||+.+++..
T Consensus 253 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~~ 315 (382)
T cd05625 253 PLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFSS 315 (382)
T ss_pred HHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChHH
Confidence 766555555422 2222334567999999999986 59999997 99999999999987764
No 118
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=3.7e-29 Score=254.30 Aligned_cols=162 Identities=23% Similarity=0.464 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+
T Consensus 123 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~-- 199 (364)
T cd07875 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILG-- 199 (364)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC-CcccCCcccCCcCCHHHHhC--
Confidence 467889999999999999999999999999999999999999999999999765432 22345578999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCC---------------------CCC---------
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPP---------------------GLY--------- 130 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~---------------------~~~--------- 130 (488)
..++.++|||||||++|+|++|+.||.+.+.......++..... ...
T Consensus 200 ---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (364)
T cd07875 200 ---MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFP 276 (364)
T ss_pred ---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCc
Confidence 56889999999999999999999999887665554444321100 000
Q ss_pred ---------CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCC
Q psy9090 131 ---------RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITS 168 (488)
Q Consensus 131 ---------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 168 (488)
.....+..+++||.+||..||.+|||+.++|+||||..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 277 DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred cccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 00112467899999999999999999999999999975
No 119
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=2.1e-29 Score=244.71 Aligned_cols=166 Identities=59% Similarity=1.110 Sum_probs=141.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..............|++.|+|||++....
T Consensus 110 ~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 189 (275)
T cd06608 110 LKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDE 189 (275)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccc
Confidence 46788999999999999999999999999999999999999999999999876544333344567899999999986543
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....++.++|+|||||++|+|++|.+||..........++.....+....+..++..+++||.+||..||++|||+.++
T Consensus 190 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~l 269 (275)
T cd06608 190 QPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEEL 269 (275)
T ss_pred cccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHH
Confidence 33456788999999999999999999999877766667777666555555555688999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++|||+
T Consensus 270 l~~~~~ 275 (275)
T cd06608 270 LEHPFI 275 (275)
T ss_pred hcCCCC
Confidence 999996
No 120
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.96 E-value=4.5e-29 Score=245.62 Aligned_cols=173 Identities=40% Similarity=0.873 Sum_probs=144.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.+|.|||++|++||||||+||+++.++.++|+|||++..............+++.|+|||++.+..
T Consensus 107 l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 186 (292)
T cd06644 107 LTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCET 186 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeecccc
Confidence 47889999999999999999999999999999999999999999999999875443323334556889999999986432
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....++.++|+|||||++|+|++|.+||..........++.....+....+..++.++.++|.+||..+|++||+++++
T Consensus 187 ~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 266 (292)
T cd06644 187 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQL 266 (292)
T ss_pred ccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 22255788999999999999999999999877766655555554444444566788999999999999999999999999
Q ss_pred hcCcCCCCCCCCc
Q psy9090 161 LEHPFITSLPEND 173 (488)
Q Consensus 161 l~hp~f~~~~~~~ 173 (488)
++||||..+.++.
T Consensus 267 l~~~~~~~~~~~~ 279 (292)
T cd06644 267 LEHPFVSSVTSNR 279 (292)
T ss_pred hcCccccccccch
Confidence 9999999887764
No 121
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=1.3e-29 Score=266.07 Aligned_cols=163 Identities=20% Similarity=0.377 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCC----------------cEEEEecCCccccccccCcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDG----------------EVKIVDFGLSRETANTFDKKKT 63 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~----------------~vkL~Dfg~a~~~~~~~~~~~~ 63 (488)
|++..++.|+.||+.||+|||+ .|||||||||+|||++.++ .+||+|||.+.... .....
T Consensus 228 l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~ 304 (467)
T PTZ00284 228 FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER---HSRTA 304 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc---ccccc
Confidence 5788899999999999999998 5999999999999998765 49999999875432 22345
Q ss_pred ccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC--CCCC-------------
Q psy9090 64 FLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN--PPPG------------- 128 (488)
Q Consensus 64 ~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~--~~~~------------- 128 (488)
.+||+.|+|||++.+ ..|+.++|||||||++|+|++|++||.+......+..+... ..+.
T Consensus 305 ~~gt~~Y~APE~~~~-----~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~ 379 (467)
T PTZ00284 305 IVSTRHYRSPEVVLG-----LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARL 379 (467)
T ss_pred ccCCccccCcHHhhc-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHH
Confidence 689999999999976 67899999999999999999999999876654433322211 0000
Q ss_pred ----------CCCC--------------CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 129 ----------LYRA--------------SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 129 ----------~~~~--------------~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
...+ ...++.+.+||.+||.+||.+|||++++|+||||.....
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 380 LYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred HhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 0000 011456789999999999999999999999999987533
No 122
>KOG0589|consensus
Probab=99.96 E-value=9.1e-30 Score=253.69 Aligned_cols=161 Identities=34% Similarity=0.569 Sum_probs=149.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++|+.+..|+.||+.|+.|||+++|+|||||+.||+++.++.|||+|||+++..........+.+|||.|++||++.+
T Consensus 103 f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d-- 180 (426)
T KOG0589|consen 103 FPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSD-- 180 (426)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCC--
Confidence 589999999999999999999999999999999999999999999999999998876557788999999999999987
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.+|+.++|||||||++|||++-+++|.+.+......++.+....+ .+..++.+++.+|+.||..+|..||++.++
T Consensus 181 ---~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~P--lp~~ys~el~~lv~~~l~~~P~~RPsa~~L 255 (426)
T KOG0589|consen 181 ---IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSP--LPSMYSSELRSLVKSMLRKNPEHRPSALEL 255 (426)
T ss_pred ---CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCC--CCccccHHHHHHHHHHhhcCCccCCCHHHH
Confidence 889999999999999999999999999999999999998876443 467889999999999999999999999999
Q ss_pred hcCcCCCC
Q psy9090 161 LEHPFITS 168 (488)
Q Consensus 161 l~hp~f~~ 168 (488)
|.+|....
T Consensus 256 L~~P~l~~ 263 (426)
T KOG0589|consen 256 LRRPHLLR 263 (426)
T ss_pred hhChhhhh
Confidence 99988764
No 123
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.96 E-value=2.3e-29 Score=247.00 Aligned_cols=175 Identities=26% Similarity=0.450 Sum_probs=141.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++...... .......|++.|+|||++.+
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-- 175 (285)
T cd05605 99 FDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG-ETIRGRVGTVGYMAPEVVKN-- 175 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-CccccccCCCCccCcHHhcC--
Confidence 578899999999999999999999999999999999999999999999998765332 22234578999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHH---HhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC--
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQI---VRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP-- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp-- 155 (488)
..++.++|+||+||++|+|++|..||.+.........+ +..... ..+..++..+.+||.+||..||++||
T Consensus 176 ---~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05605 176 ---ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE--EYSEKFSEAARSICRQLLTKDPGFRLGC 250 (285)
T ss_pred ---CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc--ccCcccCHHHHHHHHHHccCCHHHhcCC
Confidence 56888999999999999999999999876543322222 222111 12345789999999999999999999
Q ss_pred ---CHHHHhcCcCCCCCCCCccccccccccc
Q psy9090 156 ---YMSELLEHPFITSLPENDLHLSTVNCQY 183 (488)
Q Consensus 156 ---s~~ell~hp~f~~~~~~~~~~~~~~~~~ 183 (488)
+++++++||||...+|..+......+++
T Consensus 251 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 281 (285)
T cd05605 251 RGEGAEEVKAHPFFRTANFKRLEAGMLEPPF 281 (285)
T ss_pred CCCCHHHHhcCcCccCCCHHHHhhCCCCCCC
Confidence 8999999999999888766544444443
No 124
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=3.3e-29 Score=252.48 Aligned_cols=164 Identities=29% Similarity=0.561 Sum_probs=132.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... ......||+.|+|||++.+.
T Consensus 115 l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~---~~~~~~~t~~y~aPE~~~~~- 190 (343)
T cd07878 115 LSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD---EMTGYVATRWYRAPEIMLNW- 190 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC---CcCCccccccccCchHhcCC-
Confidence 57889999999999999999999999999999999999999999999999876543 23455789999999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CC-------------------CCCCC------C
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PP-------------------PGLYR------A 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~-------------------~~~~~------~ 132 (488)
..++.++|||||||++|+|++|..||.+......+..+... +. +.... .
T Consensus 191 ---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T cd07878 191 ---MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIF 267 (343)
T ss_pred ---ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhc
Confidence 45788999999999999999999999876654444333211 00 00000 1
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
...++.+.+||.+||..||.+|||+.++++||||.....
T Consensus 268 ~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 268 RGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred cCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 234667899999999999999999999999999987543
No 125
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=2.7e-29 Score=245.49 Aligned_cols=168 Identities=24% Similarity=0.438 Sum_probs=134.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||++...... .......|++.|+|||++.+
T Consensus 92 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-- 168 (277)
T cd05607 92 LEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQRAGTNGYMAPEILKE-- 168 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeeccCCCCCccCHHHHcc--
Confidence 356778899999999999999999999999999999999999999999998765432 22234568999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH----HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT----RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
..++.++|+||+||++|+|++|..||...... ........... . .....+++++++||.+||+.||++||+
T Consensus 169 ---~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~L~~~P~~R~~ 243 (277)
T cd05607 169 ---EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV-K-FEHQNFTEESKDICRLFLAKKPEDRLG 243 (277)
T ss_pred ---CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc-c-cccccCCHHHHHHHHHHhccCHhhCCC
Confidence 55889999999999999999999999764322 11222222111 1 122467999999999999999999999
Q ss_pred H----HHHhcCcCCCCCCCCcccc
Q psy9090 157 M----SELLEHPFITSLPENDLHL 176 (488)
Q Consensus 157 ~----~ell~hp~f~~~~~~~~~~ 176 (488)
+ ++++.||||+.+++..+..
T Consensus 244 ~~~~~~~~~~h~~f~~~~~~~~~~ 267 (277)
T cd05607 244 SREKNDDPRKHEFFKTINFPRLEA 267 (277)
T ss_pred CccchhhhhcChhhcCCCHHHHhc
Confidence 9 6788999999987765543
No 126
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96 E-value=3.9e-29 Score=254.67 Aligned_cols=172 Identities=22% Similarity=0.353 Sum_probs=138.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++...
T Consensus 139 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 218 (371)
T cd05622 139 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 218 (371)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhcc
Confidence 4788899999999999999999999999999999999999999999999987654321 123456799999999998752
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCCCCCCcCHHHHHHHHHhcccCCCC--CCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLYRASNWSQHYVDFIAECLEKNPEH--RPY 156 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~--Rps 156 (488)
.. ...++.++|||||||++|+|++|.+||.+.+......++..... ...+....++..++++|.+||..+|.+ |++
T Consensus 219 ~~-~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~ 297 (371)
T cd05622 219 GG-DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 297 (371)
T ss_pred CC-CccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCC
Confidence 11 13478899999999999999999999998877666666654322 223334568999999999999844433 789
Q ss_pred HHHHhcCcCCCCCCCCc
Q psy9090 157 MSELLEHPFITSLPEND 173 (488)
Q Consensus 157 ~~ell~hp~f~~~~~~~ 173 (488)
++++++||||++.++..
T Consensus 298 ~~ei~~h~~~~~~~~~~ 314 (371)
T cd05622 298 VEEIKRHLFFKNDQWAW 314 (371)
T ss_pred HHHHhcCcccCCCChhH
Confidence 99999999999866543
No 127
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=3.6e-29 Score=256.02 Aligned_cols=168 Identities=26% Similarity=0.468 Sum_probs=135.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc----------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---------------------- 58 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---------------------- 58 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (381)
T cd05626 98 FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLW 177 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccc
Confidence 5788999999999999999999999999999999999999999999999875321000
Q ss_pred -------------------------CccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC
Q psy9090 59 -------------------------DKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH 113 (488)
Q Consensus 59 -------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~ 113 (488)
....+.+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~~DiwSlG~il~elltG~~Pf~~~~ 252 (381)
T cd05626 178 DDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-----KGYTQLCDWWSVGVILFEMLVGQPPFLAPT 252 (381)
T ss_pred ccccccccccccchhhccccccccccccccccCCccccCHHHHcC-----CCCCCccceeehhhHHHHHHhCCCCCcCCC
Confidence 00123579999999999975 568899999999999999999999998877
Q ss_pred hHHHHHHHHhCC-CCCCCCCCCcCHHHHHHHHHhcc--cCCCCCCCHHHHhcCcCCCCCCCCc
Q psy9090 114 PTRALFQIVRNP-PPGLYRASNWSQHYVDFIAECLE--KNPEHRPYMSELLEHPFITSLPEND 173 (488)
Q Consensus 114 ~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~--~dP~~Rps~~ell~hp~f~~~~~~~ 173 (488)
.......+.... ....+....+++++++||.+|+. .+|..|+++.++++||||+.+.|..
T Consensus 253 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 253 PTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCChhH
Confidence 665555554321 22233334679999999999664 4555699999999999999988764
No 128
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=4.3e-29 Score=255.84 Aligned_cols=166 Identities=24% Similarity=0.439 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc-cCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT-FDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ........||+.|+|||++.+
T Consensus 179 l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~- 257 (391)
T PHA03212 179 IAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR- 257 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcC-
Confidence 467889999999999999999999999999999999999999999999998643221 122345679999999999975
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC-------hHHHHHHHHh--------------------------CCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH-------PTRALFQIVR--------------------------NPP 126 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~-------~~~~~~~~~~--------------------------~~~ 126 (488)
..|+.++|||||||++|+|++|..||.... ....+..++. ...
T Consensus 258 ----~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (391)
T PHA03212 258 ----DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSS 333 (391)
T ss_pred ----CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccC
Confidence 568999999999999999999998875321 1111111111 000
Q ss_pred C-CCCC-----CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 127 P-GLYR-----ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 127 ~-~~~~-----~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
. +... ....+.++.+||.+||..||.+|||++++|+||||..++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~ 384 (391)
T PHA03212 334 RKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD 384 (391)
T ss_pred CCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence 0 0000 0123567899999999999999999999999999987643
No 129
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=5.2e-29 Score=242.17 Aligned_cols=165 Identities=49% Similarity=0.978 Sum_probs=135.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||+|||+++|+||||||+||+++.++.++|+|||++..............|++.|+|||++.+..
T Consensus 108 l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~ 187 (272)
T cd06637 108 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 187 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhcccc
Confidence 47888999999999999999999999999999999999999999999999876543323344567899999999986532
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....++.++|+||+||++|+|++|..||................... .....++..+.+|+.+||..+|.+|||+.++
T Consensus 188 ~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 266 (272)
T cd06637 188 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR-LKSKKWSKKFQSFIESCLVKNHSQRPTTEQL 266 (272)
T ss_pred CcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCC-CCCCCcCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 223468889999999999999999999998766555444443332222 2344678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
+.||||
T Consensus 267 l~~~~~ 272 (272)
T cd06637 267 MKHPFI 272 (272)
T ss_pred hhCCCC
Confidence 999997
No 130
>KOG0596|consensus
Probab=99.96 E-value=2.5e-29 Score=250.33 Aligned_cols=164 Identities=25% Similarity=0.497 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcccccC
Q psy9090 5 HIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRCGHKE 82 (488)
Q Consensus 5 ~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~ 82 (488)
.++.|..||++++.++|++||||.||||.|+|+- .|.+||+|||.|........ ...+.+||+.||+||.+......
T Consensus 461 ~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~ 539 (677)
T KOG0596|consen 461 FLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSS 539 (677)
T ss_pred HHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhcccc
Confidence 6889999999999999999999999999999987 48999999999987654322 33566899999999998763222
Q ss_pred ------CCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCC-cCHHHHHHHHHhcccCCCCCC
Q psy9090 83 ------VDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASN-WSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 83 ------~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~Rp 155 (488)
.-..++++||||||||||+|+.|++||............+..+......+.- -..++.++++.||..||.+||
T Consensus 540 ~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~ 619 (677)
T KOG0596|consen 540 RENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRW 619 (677)
T ss_pred ccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCC
Confidence 2236789999999999999999999997644222222222333221111111 123389999999999999999
Q ss_pred CHHHHhcCcCCCCC
Q psy9090 156 YMSELLEHPFITSL 169 (488)
Q Consensus 156 s~~ell~hp~f~~~ 169 (488)
|+.++|+|||....
T Consensus 620 si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 620 SIPELLQHPFLQIQ 633 (677)
T ss_pred CcHHHhcCcccccc
Confidence 99999999999764
No 131
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.96 E-value=5.5e-29 Score=243.25 Aligned_cols=170 Identities=42% Similarity=0.914 Sum_probs=143.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|++.+++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..............+++.|+|||.+....
T Consensus 100 l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 179 (280)
T cd06611 100 LTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACET 179 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcc
Confidence 57889999999999999999999999999999999999999999999998876544333344567899999999986432
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....++.++|+||+|+++|+|++|.+||..........++.....+....+..++..+.++|.+||..+|.+||++.++
T Consensus 180 ~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 259 (280)
T cd06611 180 FKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAEL 259 (280)
T ss_pred cCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 22356788999999999999999999999888776666666655555555566789999999999999999999999999
Q ss_pred hcCcCCCCCC
Q psy9090 161 LEHPFITSLP 170 (488)
Q Consensus 161 l~hp~f~~~~ 170 (488)
++||||....
T Consensus 260 l~~~~~~~~~ 269 (280)
T cd06611 260 LKHPFVSDQS 269 (280)
T ss_pred hcChhhcccc
Confidence 9999998753
No 132
>KOG0611|consensus
Probab=99.96 E-value=2.2e-29 Score=242.04 Aligned_cols=157 Identities=32% Similarity=0.551 Sum_probs=139.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.+++++++||++|+.|||+++++|||||.+|||++.|+.+||+|||++..+... ....++||+|-|.+||++.+
T Consensus 150 LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-kfLqTFCGSPLYASPEIvNG-- 226 (668)
T KOG0611|consen 150 LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-KFLQTFCGSPLYASPEIVNG-- 226 (668)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc-cHHHHhcCCcccCCccccCC--
Confidence 689999999999999999999999999999999999999999999999999776554 45678999999999999987
Q ss_pred cCCCCC-CCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGY-DNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~-~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
.+| ++.+|.|||||+||.|+.|..||.+.+......+|.++.. ..+.-+..+.-||+.||..||++|.|+.+
T Consensus 227 ---~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY----rEP~~PSdA~gLIRwmLmVNP~RRATieD 299 (668)
T KOG0611|consen 227 ---TPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY----REPETPSDASGLIRWMLMVNPERRATIED 299 (668)
T ss_pred ---CCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc----cCCCCCchHHHHHHHHHhcCcccchhHHH
Confidence 555 5789999999999999999999999988877777776532 23344777889999999999999999999
Q ss_pred HhcCcCCC
Q psy9090 160 LLEHPFIT 167 (488)
Q Consensus 160 ll~hp~f~ 167 (488)
+..|=|..
T Consensus 300 iAsHWWvN 307 (668)
T KOG0611|consen 300 IASHWWVN 307 (668)
T ss_pred Hhhhheee
Confidence 99998874
No 133
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=9.6e-29 Score=243.05 Aligned_cols=167 Identities=50% Similarity=0.955 Sum_probs=139.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++..............|++.|+|||++....
T Consensus 125 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 204 (291)
T cd06639 125 LDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ 204 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCC
Confidence 46788999999999999999999999999999999999999999999999876543322233456889999999986532
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....++.++|+||+||++|+|++|++||...........+.+...+....+..++..+.++|.+||..+|++||++.++
T Consensus 205 ~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~i 284 (291)
T cd06639 205 QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHL 284 (291)
T ss_pred CcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHH
Confidence 22234688999999999999999999999887766666666655555544556678899999999999999999999999
Q ss_pred hcCcCCC
Q psy9090 161 LEHPFIT 167 (488)
Q Consensus 161 l~hp~f~ 167 (488)
++||||+
T Consensus 285 l~~~~~~ 291 (291)
T cd06639 285 LEHPFIK 291 (291)
T ss_pred hcCcccC
Confidence 9999984
No 134
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=3.7e-29 Score=255.50 Aligned_cols=168 Identities=28% Similarity=0.461 Sum_probs=134.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC---------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--------------------- 59 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--------------------- 59 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (377)
T cd05629 98 FSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRN 177 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccc
Confidence 57889999999999999999999999999999999999999999999999863211000
Q ss_pred --------------------------ccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC
Q psy9090 60 --------------------------KKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH 113 (488)
Q Consensus 60 --------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~ 113 (488)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 252 (377)
T cd05629 178 SVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-----QGYGQECDWWSLGAIMFECLIGWPPFCSEN 252 (377)
T ss_pred ccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-----CCCCCceeeEecchhhhhhhcCCCCCCCCC
Confidence 0012469999999999975 568899999999999999999999998877
Q ss_pred hHHHHHHHHhCCC-CCCCCCCCcCHHHHHHHHHhcccCCCCC---CCHHHHhcCcCCCCCCCCcc
Q psy9090 114 PTRALFQIVRNPP-PGLYRASNWSQHYVDFIAECLEKNPEHR---PYMSELLEHPFITSLPENDL 174 (488)
Q Consensus 114 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~R---ps~~ell~hp~f~~~~~~~~ 174 (488)
.......+..... ...+....++.++++||.+||. +|.+| +++.+++.||||+.++|..+
T Consensus 253 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 253 SHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred HHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 6655555543221 1222223578999999999997 67765 59999999999998887654
No 135
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96 E-value=9.3e-29 Score=250.31 Aligned_cols=166 Identities=32% Similarity=0.573 Sum_probs=131.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHK 81 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~ 81 (488)
++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.............||+.|+|||++.....
T Consensus 166 ~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 245 (353)
T PLN00034 166 DEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLN 245 (353)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccc
Confidence 56788899999999999999999999999999999999999999999998766543333445679999999999854221
Q ss_pred CCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH---HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 82 EVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT---RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 82 ~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
....++.++|||||||++|+|++|+.||...... .....+.....+ ..+..++.++++||.+||..||++|||+.
T Consensus 246 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ 323 (353)
T PLN00034 246 HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPP--EAPATASREFRHFISCCLQREPAKRWSAM 323 (353)
T ss_pred cCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCC--CCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence 1233456899999999999999999999743221 112222222111 23456789999999999999999999999
Q ss_pred HHhcCcCCCCC
Q psy9090 159 ELLEHPFITSL 169 (488)
Q Consensus 159 ell~hp~f~~~ 169 (488)
++++||||...
T Consensus 324 ell~hp~~~~~ 334 (353)
T PLN00034 324 QLLQHPFILRA 334 (353)
T ss_pred HHhcCcccccC
Confidence 99999999874
No 136
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=5.1e-29 Score=262.59 Aligned_cols=162 Identities=29% Similarity=0.521 Sum_probs=139.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc--cCccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT--FDKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.+
T Consensus 140 l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~ 219 (496)
T PTZ00283 140 FREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR 219 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCC
Confidence 468889999999999999999999999999999999999999999999998765432 122345679999999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..|+.++|||||||++|+|++|+.||.+.........+....... .+..+++++.+++.+||..+|.+||++.
T Consensus 220 -----~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~dP~~RPs~~ 292 (496)
T PTZ00283 220 -----KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP--LPPSISPEMQEIVTALLSSDPKRRPSSS 292 (496)
T ss_pred -----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcccChhhCcCHH
Confidence 568899999999999999999999999887766666665544332 3567899999999999999999999999
Q ss_pred HHhcCcCCCCC
Q psy9090 159 ELLEHPFITSL 169 (488)
Q Consensus 159 ell~hp~f~~~ 169 (488)
++++|||++..
T Consensus 293 ell~~p~~~~~ 303 (496)
T PTZ00283 293 KLLNMPICKLF 303 (496)
T ss_pred HHHhCHHHHHh
Confidence 99999998764
No 137
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.7e-29 Score=256.81 Aligned_cols=170 Identities=22% Similarity=0.364 Sum_probs=134.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
|++.++..++.||+.||.|||++||+||||||+|||++.++.++|+|||++........ ......||+.|+|||++.+
T Consensus 182 l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 261 (392)
T PHA03207 182 LPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLAL 261 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcC
Confidence 57889999999999999999999999999999999999999999999999876543211 2234579999999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH---HHHHHHHhC--------------------------CCCCC
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT---RALFQIVRN--------------------------PPPGL 129 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~---~~~~~~~~~--------------------------~~~~~ 129 (488)
..|+.++|||||||++|+|++|..||.+.... ..+..+++. ..+..
T Consensus 262 -----~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (392)
T PHA03207 262 -----DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPY 336 (392)
T ss_pred -----CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCc
Confidence 56889999999999999999999999764321 112221110 00000
Q ss_pred CC-----CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCCccc
Q psy9090 130 YR-----ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 130 ~~-----~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~~~~ 175 (488)
.. ...++.++.++|.+||..||++|||+.++|.||||...+++.+.
T Consensus 337 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 337 TIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLLN 387 (392)
T ss_pred cccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhhc
Confidence 00 12346788999999999999999999999999999988876543
No 138
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=1.8e-28 Score=236.24 Aligned_cols=159 Identities=31% Similarity=0.622 Sum_probs=136.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.|++.||.+||++|++||||||+||+++.++.++|+|||++..............+++.|+|||++.+
T Consensus 99 l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 176 (257)
T cd08223 99 LPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN-- 176 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcC--
Confidence 478899999999999999999999999999999999999999999999998765443333445678999999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...+.......+.....+. .+..+++.+.+++.+||..+|++||++.++
T Consensus 177 ---~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~ 251 (257)
T cd08223 177 ---KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP--MPKDYSPELGELIATMLSKRPEKRPSVKSI 251 (257)
T ss_pred ---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--CccccCHHHHHHHHHHhccCcccCCCHHHH
Confidence 567889999999999999999999998777665555555544332 245678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++||||
T Consensus 252 l~~~~~ 257 (257)
T cd08223 252 LRQPYI 257 (257)
T ss_pred hcCCCC
Confidence 999997
No 139
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.96 E-value=7.7e-29 Score=248.82 Aligned_cols=175 Identities=21% Similarity=0.432 Sum_probs=139.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ ......||+.|+|||++.+.
T Consensus 99 l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (332)
T cd05623 99 LPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 178 (332)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhcc
Confidence 47888999999999999999999999999999999999999999999999875432211 22345799999999998743
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCC-C-CCCCCcCHHHHHHHHHhcccCCCC--CC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPG-L-YRASNWSQHYVDFIAECLEKNPEH--RP 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~-~-~~~~~~s~~~~~li~~~L~~dP~~--Rp 155 (488)
......++.++|||||||++|+|++|+.||..........++....... . .....+++.+++||.+||..+|.+ |+
T Consensus 179 ~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~ 258 (332)
T cd05623 179 EDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQN 258 (332)
T ss_pred ccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCC
Confidence 2222568889999999999999999999999887766666665432211 1 112457999999999999765544 68
Q ss_pred CHHHHhcCcCCCCCCCCccc
Q psy9090 156 YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~ 175 (488)
+++++++||||..++|..+.
T Consensus 259 ~~~~~~~h~~f~~~~~~~~~ 278 (332)
T cd05623 259 GIEDFKQHPFFTGIDWDNIR 278 (332)
T ss_pred CHHHHhCCCCcCCCCHHHHh
Confidence 99999999999998887543
No 140
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=4.6e-29 Score=254.70 Aligned_cols=168 Identities=26% Similarity=0.483 Sum_probs=135.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc-----------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT----------------------- 57 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~----------------------- 57 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 98 ~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (376)
T cd05598 98 FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEW 177 (376)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccc
Confidence 478889999999999999999999999999999999999999999999997532100
Q ss_pred --------------------cCccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHH
Q psy9090 58 --------------------FDKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRA 117 (488)
Q Consensus 58 --------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~ 117 (488)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~ 252 (376)
T cd05598 178 SEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-----TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAET 252 (376)
T ss_pred cccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-----CCCCcceeeeeccceeeehhhCCCCCCCCCHHHH
Confidence 000123579999999999976 5688999999999999999999999998876655
Q ss_pred HHHHHhCC-CCCCCCCCCcCHHHHHHHHHhcccCCCCCC---CHHHHhcCcCCCCCCCCcc
Q psy9090 118 LFQIVRNP-PPGLYRASNWSQHYVDFIAECLEKNPEHRP---YMSELLEHPFITSLPENDL 174 (488)
Q Consensus 118 ~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp---s~~ell~hp~f~~~~~~~~ 174 (488)
...+.... ....+....+++.+.++|.+|+ .+|.+|+ ++.++++||||+.+++...
T Consensus 253 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~ 312 (376)
T cd05598 253 QLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASL 312 (376)
T ss_pred HHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHH
Confidence 55544321 1122223467899999999987 5999999 9999999999998876544
No 141
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=1.1e-28 Score=241.28 Aligned_cols=165 Identities=52% Similarity=1.005 Sum_probs=135.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..............|++.|+|||.+....
T Consensus 118 ~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~ 197 (282)
T cd06636 118 LKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 197 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCccc
Confidence 46788899999999999999999999999999999999999999999999876543323334567899999999986432
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....++.++|+|||||++|+|++|..||....+......+.....+. .....++..+.+||.+||..||.+||++.++
T Consensus 198 ~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~el 276 (282)
T cd06636 198 NPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPK-LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQL 276 (282)
T ss_pred CcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCC-CcccccCHHHHHHHHHHhCCChhhCcCHHHH
Confidence 223567889999999999999999999998776555555444433222 2345689999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++||||
T Consensus 277 l~~~~~ 282 (282)
T cd06636 277 LKHPFI 282 (282)
T ss_pred hcCCCC
Confidence 999997
No 142
>KOG0577|consensus
Probab=99.96 E-value=4.4e-29 Score=249.58 Aligned_cols=165 Identities=39% Similarity=0.783 Sum_probs=149.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|-|-+|+.|+.+.+.||+|||+++.||||||..|||++..|.|||+|||.+.... +..+++|||+|||||++...+
T Consensus 123 lqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~----PAnsFvGTPywMAPEVILAMD 198 (948)
T KOG0577|consen 123 LQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA----PANSFVGTPYWMAPEVILAMD 198 (948)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC----chhcccCCccccchhHheecc
Confidence 4577899999999999999999999999999999999999999999999986543 456899999999999998765
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
. +.|+-++||||||++..+|...+||+..++....++.|-.+..|.+. ...||..+++|+..||.+-|.+|||.+++
T Consensus 199 E--GqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq-s~eWS~~F~~Fvd~CLqKipqeRptse~l 275 (948)
T KOG0577|consen 199 E--GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ-SNEWSDYFRNFVDSCLQKIPQERPTSEEL 275 (948)
T ss_pred c--cccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC-CchhHHHHHHHHHHHHhhCcccCCcHHHH
Confidence 4 67999999999999999999999999999999999999988877764 56899999999999999999999999999
Q ss_pred hcCcCCCCCCCC
Q psy9090 161 LEHPFITSLPEN 172 (488)
Q Consensus 161 l~hp~f~~~~~~ 172 (488)
|.|+|+..-...
T Consensus 276 l~H~fv~R~Rp~ 287 (948)
T KOG0577|consen 276 LKHRFVLRERPP 287 (948)
T ss_pred hhcchhccCCCc
Confidence 999999765443
No 143
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=9.7e-29 Score=241.89 Aligned_cols=167 Identities=26% Similarity=0.485 Sum_probs=134.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|++..+..++.||+.||.|||++|++||||||+|||++.++.++|+|||++...... ......|++.|+|||.+..+
T Consensus 94 l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~- 170 (279)
T cd05633 94 FSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKG- 170 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--CccCcCCCcCccCHHHhcCC-
Confidence 578899999999999999999999999999999999999999999999998654332 22334689999999998532
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh--HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP--TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP--- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp--- 155 (488)
..++.++|+||+||++|+|++|..||..... .....+..... ....+..++.+++++|.+||..||++||
T Consensus 171 ---~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 245 (279)
T cd05633 171 ---TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTV--NVELPDSFSPELKSLLEGLLQRDVSKRLGCL 245 (279)
T ss_pred ---CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcC--CcCCccccCHHHHHHHHHHhcCCHHHhcCCC
Confidence 4578899999999999999999999965432 12222222111 1223456799999999999999999999
Q ss_pred --CHHHHhcCcCCCCCCCCccc
Q psy9090 156 --YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 --s~~ell~hp~f~~~~~~~~~ 175 (488)
|++++++||||+.+.+....
T Consensus 246 ~~~~~~~~~h~~~~~~~~~~~~ 267 (279)
T cd05633 246 GRGAQEVKEHVFFKGIDWQQVY 267 (279)
T ss_pred CCCHHHHHhCccccCCCHhHHh
Confidence 69999999999998876543
No 144
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=1.8e-28 Score=246.10 Aligned_cols=162 Identities=28% Similarity=0.635 Sum_probs=130.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHEN-HVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~g~~~y~aPE~~~~- 176 (331)
T cd06649 100 IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQG- 176 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--ccccCCCCcCcCCHhHhcC-
Confidence 46888999999999999999986 6999999999999999999999999998765432 2344578999999999976
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh------------------------------------
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR------------------------------------ 123 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~------------------------------------ 123 (488)
..++.++|+|||||++|+|++|+.||........ ..++.
T Consensus 177 ----~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
T cd06649 177 ----THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL-EAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAM 251 (331)
T ss_pred ----CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhcccccccccCCccccCcccccccccccccccccccch
Confidence 5688999999999999999999999976554332 11111
Q ss_pred -----------CCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 124 -----------NPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 124 -----------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
...+. .....+++++++||.+||..||++|||+.++++||||+....
T Consensus 252 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~ 309 (331)
T cd06649 252 AIFELLDYIVNEPPPK-LPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEV 309 (331)
T ss_pred hHHHHHHHHHhCCCcC-CCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhccc
Confidence 11111 112246789999999999999999999999999999987543
No 145
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96 E-value=1.4e-28 Score=250.77 Aligned_cols=166 Identities=26% Similarity=0.465 Sum_probs=133.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
|++..++.++.||+.||.|||++|++||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+.
T Consensus 100 l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 179 (372)
T cd07853 100 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGS 179 (372)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCC
Confidence 5788999999999999999999999999999999999999999999999987543221 122334678999999998752
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh-----------------------CCC-CCC-----C
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR-----------------------NPP-PGL-----Y 130 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~-----------------------~~~-~~~-----~ 130 (488)
..++.++||||+||++|+|++|++||.+.++...+..+.. ... ++. .
T Consensus 180 ----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (372)
T cd07853 180 ----RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYT 255 (372)
T ss_pred ----CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcc
Confidence 4578899999999999999999999987766544433321 000 000 1
Q ss_pred CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 131 RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 131 ~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
.....++++.+||.+||..||.+|||+.++++||||....
T Consensus 256 ~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 256 LSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred cCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 1234578899999999999999999999999999998754
No 146
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.96 E-value=1.5e-28 Score=242.96 Aligned_cols=167 Identities=25% Similarity=0.485 Sum_probs=133.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++..............+++.|+|||++.+.
T Consensus 101 ~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~- 179 (301)
T cd07873 101 INMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGS- 179 (301)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCC-
Confidence 4678899999999999999999999999999999999999999999999987644332233344678999999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CCC------------------CC------CCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PPP------------------GL------YRAS 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~~------------------~~------~~~~ 133 (488)
..++.++|||||||++|+|++|++||...+.......+... +.. .. ....
T Consensus 180 ---~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (301)
T cd07873 180 ---TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAP 256 (301)
T ss_pred ---CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcC
Confidence 45788999999999999999999999877655444332211 000 00 0012
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
..++.+++||.+||..||.+|||++++++||||..+.+
T Consensus 257 ~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~ 294 (301)
T cd07873 257 RLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294 (301)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 45788999999999999999999999999999987654
No 147
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.96 E-value=7.8e-29 Score=243.30 Aligned_cols=166 Identities=27% Similarity=0.463 Sum_probs=135.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...... .......|++.|+|||++.+
T Consensus 99 l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-- 175 (285)
T cd05630 99 FEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVKN-- 175 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-ccccCCCCCccccChHHHcC--
Confidence 467889999999999999999999999999999999999999999999998654332 22234578999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH---HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC-
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT---RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps- 156 (488)
..++.++|+||+||++|+|++|..||...... ............ ..+..+++.+++|+.+||..||++|||
T Consensus 176 ---~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~s~ 250 (285)
T cd05630 176 ---ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQE--EYSEKFSPDARSLCKMLLCKDPKERLGC 250 (285)
T ss_pred ---CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhh--hcCccCCHHHHHHHHHHhhcCHHHccCC
Confidence 56888999999999999999999999765422 122222222211 124567899999999999999999999
Q ss_pred ----HHHHhcCcCCCCCCCCcc
Q psy9090 157 ----MSELLEHPFITSLPENDL 174 (488)
Q Consensus 157 ----~~ell~hp~f~~~~~~~~ 174 (488)
++++++||||+.+.+..+
T Consensus 251 ~~~~~~~~~~h~~~~~~~~~~~ 272 (285)
T cd05630 251 QGGGAREVKEHPLFKQINFKRL 272 (285)
T ss_pred CCCchHHHHcChhhhccCHHHH
Confidence 899999999998777644
No 148
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.96 E-value=2e-28 Score=245.70 Aligned_cols=174 Identities=22% Similarity=0.424 Sum_probs=137.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ......||+.|+|||++...
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (331)
T cd05597 99 LPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAM 178 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhc
Confidence 57889999999999999999999999999999999999999999999999876543222 12234699999999998743
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCC-CCCCCcCHHHHHHHHHhcccCCCC--CC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGL-YRASNWSQHYVDFIAECLEKNPEH--RP 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~-~~~~~~s~~~~~li~~~L~~dP~~--Rp 155 (488)
......++.++||||+||++|+|++|+.||.+.........+..... ... .....+++.++++|++||..++.+ |+
T Consensus 179 ~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~ 258 (331)
T cd05597 179 EDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRN 258 (331)
T ss_pred cccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCC
Confidence 22224578899999999999999999999988776655555543221 111 112347899999999998764443 78
Q ss_pred CHHHHhcCcCCCCCCCCcc
Q psy9090 156 YMSELLEHPFITSLPENDL 174 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~ 174 (488)
++.++++||||...+|...
T Consensus 259 ~~~~~l~hp~~~~~~~~~~ 277 (331)
T cd05597 259 GLQDFKDHPFFEGIDWDNI 277 (331)
T ss_pred CHHHHhcCCCCCCCCHHHH
Confidence 9999999999999887654
No 149
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.96 E-value=2e-28 Score=235.57 Aligned_cols=161 Identities=47% Similarity=0.988 Sum_probs=136.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++..............++..|+|||++.+
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-- 173 (256)
T cd06612 96 LTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQE-- 173 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhc--
Confidence 478899999999999999999999999999999999999999999999998866544323344568899999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|+.||....+......+.....+....+..++..+.++|.+||..+|++|||+.++
T Consensus 174 ---~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~i 250 (256)
T cd06612 174 ---IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQL 250 (256)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHH
Confidence 56788999999999999999999999877665554444433333333455678899999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
+.||||
T Consensus 251 l~~~~~ 256 (256)
T cd06612 251 LQHPFI 256 (256)
T ss_pred hcCCCC
Confidence 999997
No 150
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.96 E-value=1.7e-28 Score=240.27 Aligned_cols=162 Identities=28% Similarity=0.515 Sum_probs=129.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++..............+++.|+|||++.+.
T Consensus 98 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 176 (285)
T cd07861 98 MDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGS- 176 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCC-
Confidence 4788999999999999999999999999999999999999999999999987654332223344678899999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CC-----------------CC------CCCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PP-----------------PG------LYRASN 134 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~-----------------~~------~~~~~~ 134 (488)
..++.++|+|||||++|+|++|++||.+............. .. +. ......
T Consensus 177 ---~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (285)
T cd07861 177 ---PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKN 253 (285)
T ss_pred ---CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCC
Confidence 45788999999999999999999999876654433332211 00 00 001234
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
++++++++|.+||..||.+|||+.++++||||
T Consensus 254 ~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 254 LDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 68899999999999999999999999999997
No 151
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=2e-28 Score=239.92 Aligned_cols=166 Identities=53% Similarity=0.972 Sum_probs=136.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++..............|++.|+|||++....
T Consensus 121 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 200 (286)
T cd06638 121 MEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ 200 (286)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhh
Confidence 46788999999999999999999999999999999999999999999999876543322334457899999999986432
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....++.++|+||+||++|+|++|..||.................+....+..++..+.++|.+||..+|++|||+.++
T Consensus 201 ~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el 280 (286)
T cd06638 201 QLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDL 280 (286)
T ss_pred hccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHH
Confidence 22245788999999999999999999999877665555444444333333455678899999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++|+||
T Consensus 281 l~~~~~ 286 (286)
T cd06638 281 LQHVFI 286 (286)
T ss_pred hhcccC
Confidence 999997
No 152
>KOG0192|consensus
Probab=99.96 E-value=2.2e-28 Score=244.52 Aligned_cols=157 Identities=32% Similarity=0.589 Sum_probs=133.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CeecccCCCCEEEccCC-cEEEEecCCccccccccCccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENH-VIHRDLRGSNVLLTKDG-EVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~ 78 (488)
|+...+..++.||+.|+.|||+++ ||||||||+|||++.++ ++||+|||+++.............||+.|||||++.+
T Consensus 139 l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~ 218 (362)
T KOG0192|consen 139 LPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRG 218 (362)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcC
Confidence 567788999999999999999999 99999999999999998 9999999999876543223334689999999999985
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh-CCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR-NPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
. ...|+.++||||+|+++|||+||+.||.+.........+.. ...+.. +...++.+..||..||..||.+||++
T Consensus 219 ~---~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~--p~~~~~~l~~l~~~CW~~dp~~RP~f 293 (362)
T KOG0192|consen 219 E---KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPI--PKECPPHLSSLMERCWLVDPSRRPSF 293 (362)
T ss_pred C---CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHhCCCCCCcCCCH
Confidence 2 26799999999999999999999999999998666666653 333433 44489999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.+++.
T Consensus 294 ~ei~~ 298 (362)
T KOG0192|consen 294 LEIVS 298 (362)
T ss_pred HHHHH
Confidence 98864
No 153
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=2.3e-28 Score=241.32 Aligned_cols=165 Identities=41% Similarity=0.784 Sum_probs=140.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..............+++.|+|||.+.+
T Consensus 112 l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 189 (296)
T cd06655 112 MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-- 189 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcC--
Confidence 578899999999999999999999999999999999999999999999998765443223334568899999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+|||||++|+|++|..||....+......+.....+....+..+++.+.++|.+||..+|.+||++.++
T Consensus 190 ---~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~i 266 (296)
T cd06655 190 ---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKEL 266 (296)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence 55788999999999999999999999887766655555444444444556788999999999999999999999999
Q ss_pred hcCcCCCCCC
Q psy9090 161 LEHPFITSLP 170 (488)
Q Consensus 161 l~hp~f~~~~ 170 (488)
+.||||+...
T Consensus 267 l~~~~~~~~~ 276 (296)
T cd06655 267 LQHPFLKLAK 276 (296)
T ss_pred hhChHhhhcc
Confidence 9999998654
No 154
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.2e-28 Score=249.95 Aligned_cols=163 Identities=25% Similarity=0.412 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+
T Consensus 154 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-- 230 (357)
T PHA03209 154 LPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-PAFLGLAGTVETNAPEVLAR-- 230 (357)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-cccccccccccccCCeecCC--
Confidence 578899999999999999999999999999999999999999999999998754322 22334579999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCC-CCCChH---------HHHHHHHhC--CCC-CCC-----------------
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPF-EDMHPT---------RALFQIVRN--PPP-GLY----------------- 130 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf-~~~~~~---------~~~~~~~~~--~~~-~~~----------------- 130 (488)
..++.++|||||||++|+|+++..|+ ...... ..+.+++.. ..+ ..+
T Consensus 231 ---~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (357)
T PHA03209 231 ---DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASL 307 (357)
T ss_pred ---CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhccc
Confidence 56889999999999999999865554 321110 111111110 000 000
Q ss_pred -----------CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 131 -----------RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 131 -----------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
....++..+.+||.+||..||.+|||+.++|+||||+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 308 ERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred CCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 012346677889999999999999999999999999863
No 155
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96 E-value=1.7e-28 Score=244.19 Aligned_cols=162 Identities=26% Similarity=0.458 Sum_probs=123.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEE----ccCCcEEEEecCCccccccccC---ccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLL----TKDGEVKIVDFGLSRETANTFD---KKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl----~~~~~vkL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aP 73 (488)
+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....... ......||+.|+||
T Consensus 105 l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aP 184 (317)
T cd07867 105 LPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184 (317)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCc
Confidence 4678899999999999999999999999999999999 5667899999999976543211 22345789999999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH---------HHHHHHHhC---CC----------CC---
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT---------RALFQIVRN---PP----------PG--- 128 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~---------~~~~~~~~~---~~----------~~--- 128 (488)
|++.+. ..++.++||||+||++|+|+||.+||...... ....++... +. +.
T Consensus 185 E~~~~~----~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (317)
T cd07867 185 ELLLGA----RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPT 260 (317)
T ss_pred HHhcCC----CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchh
Confidence 998652 45788999999999999999999999643211 111111100 00 00
Q ss_pred --------C-----------CCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 129 --------L-----------YRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 129 --------~-----------~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
. ......+..+.+||.+||..||.+|||+.++|+||||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 261 LQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0 0011235668899999999999999999999999998
No 156
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=2.4e-28 Score=241.15 Aligned_cols=164 Identities=40% Similarity=0.768 Sum_probs=137.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++..............+++.|+|||.+.+
T Consensus 113 ~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 190 (296)
T cd06654 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-- 190 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcC--
Confidence 467789999999999999999999999999999999999999999999998765433222334578899999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+||++|+|++|+.||....+......+.....+....+..++..+.++|.+||..+|++|||+.++
T Consensus 191 ---~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ei 267 (296)
T cd06654 191 ---KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267 (296)
T ss_pred ---CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHH
Confidence 55788999999999999999999999887765554444444433333455678999999999999999999999999
Q ss_pred hcCcCCCCC
Q psy9090 161 LEHPFITSL 169 (488)
Q Consensus 161 l~hp~f~~~ 169 (488)
++||||...
T Consensus 268 l~~~~~~~~ 276 (296)
T cd06654 268 LQHQFLKIA 276 (296)
T ss_pred hhChhhhcc
Confidence 999999864
No 157
>KOG4279|consensus
Probab=99.96 E-value=3.4e-29 Score=254.09 Aligned_cols=164 Identities=35% Similarity=0.686 Sum_probs=139.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEc-cCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLT-KDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~-~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+|..+.+|.+||++||.|||++.|||||||-+|+||+ -.|.+||+|||.++....-.....++.||..|||||++..+
T Consensus 673 NEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG- 751 (1226)
T KOG4279|consen 673 NESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQG- 751 (1226)
T ss_pred chhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccC-
Confidence 5788999999999999999999999999999999997 47899999999999887666778899999999999999764
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHH-HHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTR-ALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..+|+.++|||||||.+.||.||++||....... .++++ .-.....+.|..+|.+++.+|.+|+.++|..||++++
T Consensus 752 --~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV-GmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~ 828 (1226)
T KOG4279|consen 752 --PRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV-GMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKD 828 (1226)
T ss_pred --CcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh-cceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHH
Confidence 3679999999999999999999999997654333 33332 2111122246778999999999999999999999999
Q ss_pred HhcCcCCCCC
Q psy9090 160 LLEHPFITSL 169 (488)
Q Consensus 160 ll~hp~f~~~ 169 (488)
+|..||++.-
T Consensus 829 LL~DpFlq~~ 838 (1226)
T KOG4279|consen 829 LLQDPFLQHN 838 (1226)
T ss_pred hccCcccccC
Confidence 9999999764
No 158
>KOG0667|consensus
Probab=99.95 E-value=1.7e-28 Score=250.51 Aligned_cols=162 Identities=32% Similarity=0.557 Sum_probs=133.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC--cEEEEecCCccccccccCccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG--EVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~--~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~ 78 (488)
|+...++.++.||+.||.+||+.||||+||||+|||+...+ .||++|||.+...... ..+.+.+..|+|||++.+
T Consensus 286 lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~---vytYiQSRfYRAPEVILG 362 (586)
T KOG0667|consen 286 LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR---VYTYIQSRFYRAPEVILG 362 (586)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc---ceeeeeccccccchhhcc
Confidence 56789999999999999999999999999999999997544 5999999999766543 236678899999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh--CCCC---------------C---C---------
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR--NPPP---------------G---L--------- 129 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~--~~~~---------------~---~--------- 129 (488)
.+|+.+.||||||||++||++|.+.|.+.+..+++..|+. +.++ . .
T Consensus 363 -----lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~ 437 (586)
T KOG0667|consen 363 -----LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSA 437 (586)
T ss_pred -----CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecc
Confidence 7899999999999999999999999999988887777653 0000 0 0
Q ss_pred --------------------CCCCC-----------cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 130 --------------------YRASN-----------WSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 130 --------------------~~~~~-----------~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
..|.. -...+.+||++||..||.+|+|+.++|+|||+....
T Consensus 438 ~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 438 PRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred cccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 00100 013468999999999999999999999999998643
No 159
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.95 E-value=2.7e-28 Score=238.59 Aligned_cols=169 Identities=28% Similarity=0.497 Sum_probs=137.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||++...... ......|++.|+|||++.++
T Consensus 94 l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~- 170 (278)
T cd05606 94 FSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKG- 170 (278)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCcCCCcCCcCcHHhcCC-
Confidence 578999999999999999999999999999999999999999999999998755332 22345789999999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH--HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT--RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP--- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp--- 155 (488)
..++.++|+||+|+++|+|++|..||...... ........... ...+..+++.+.+++.+||..+|.+||
T Consensus 171 ---~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~li~~~l~~~p~~R~~~~ 245 (278)
T cd05606 171 ---VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCL 245 (278)
T ss_pred ---CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccC--CCCCCcCCHHHHHHHHHHhhcCHHhccCCC
Confidence 35788999999999999999999999765321 11222222211 223445789999999999999999999
Q ss_pred --CHHHHhcCcCCCCCCCCccccc
Q psy9090 156 --YMSELLEHPFITSLPENDLHLS 177 (488)
Q Consensus 156 --s~~ell~hp~f~~~~~~~~~~~ 177 (488)
++.++++||||+...|+.....
T Consensus 246 ~~~~~~ll~~~~~~~~~~~~~~~~ 269 (278)
T cd05606 246 GRGAQEVKEHPFFRSLDWQMVFLQ 269 (278)
T ss_pred CCCHHHHHhCccccCCCchHhhhc
Confidence 9999999999999888765433
No 160
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=2.2e-28 Score=257.22 Aligned_cols=162 Identities=26% Similarity=0.503 Sum_probs=139.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
|++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+
T Consensus 166 l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 245 (478)
T PTZ00267 166 FQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWER 245 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCC
Confidence 4678899999999999999999999999999999999999999999999998654321 12345679999999999876
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|||||||++|+|++|..||.+.........+.....++ .+..++..+.++|.+||..+|++||++.
T Consensus 246 -----~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~Rps~~ 318 (478)
T PTZ00267 246 -----KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP--FPCPVSSGMKALLDPLLSKNPALRPTTQ 318 (478)
T ss_pred -----CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CCccCCHHHHHHHHHHhccChhhCcCHH
Confidence 568899999999999999999999998887777666666544332 3456789999999999999999999999
Q ss_pred HHhcCcCCCCC
Q psy9090 159 ELLEHPFITSL 169 (488)
Q Consensus 159 ell~hp~f~~~ 169 (488)
+++.|+|++.+
T Consensus 319 ~~l~~~~~~~~ 329 (478)
T PTZ00267 319 QLLHTEFLKYV 329 (478)
T ss_pred HHHhCHHHHHH
Confidence 99999999653
No 161
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.95 E-value=5e-28 Score=237.51 Aligned_cols=166 Identities=36% Similarity=0.720 Sum_probs=139.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||+|||++|++||||+|+||+++.++.++|+|||++..............|++.|+|||.+.+
T Consensus 112 ~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 189 (285)
T cd06648 112 MNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISR-- 189 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcC--
Confidence 467889999999999999999999999999999999999999999999987655433233344568999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...++......+.....+....+...+..+.++|.+||..+|++||++.++
T Consensus 190 ---~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i 266 (285)
T cd06648 190 ---LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAEL 266 (285)
T ss_pred ---CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 56788999999999999999999999887766655555544333333344478999999999999999999999999
Q ss_pred hcCcCCCCCCC
Q psy9090 161 LEHPFITSLPE 171 (488)
Q Consensus 161 l~hp~f~~~~~ 171 (488)
++||||+....
T Consensus 267 l~~~~~~~~~~ 277 (285)
T cd06648 267 LNHPFLAKAGP 277 (285)
T ss_pred ccCcccccCCC
Confidence 99999987543
No 162
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95 E-value=3e-28 Score=240.00 Aligned_cols=165 Identities=35% Similarity=0.701 Sum_probs=137.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++..............|++.|+|||.+.+
T Consensus 115 l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 192 (292)
T cd06658 115 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISR-- 192 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHcc--
Confidence 467889999999999999999999999999999999999999999999998755433333344578999999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...........+.....+........+..+.+++.+||..+|.+|||++++
T Consensus 193 ---~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~i 269 (292)
T cd06658 193 ---LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQEL 269 (292)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHH
Confidence 56788999999999999999999999887765554444433333333334578899999999999999999999999
Q ss_pred hcCcCCCCCC
Q psy9090 161 LEHPFITSLP 170 (488)
Q Consensus 161 l~hp~f~~~~ 170 (488)
++||||....
T Consensus 270 l~~~~~~~~~ 279 (292)
T cd06658 270 LQHPFLKLAG 279 (292)
T ss_pred hhChhhhccC
Confidence 9999998654
No 163
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=3.1e-28 Score=238.95 Aligned_cols=172 Identities=25% Similarity=0.428 Sum_probs=138.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...... .......|++.|+|||++.+
T Consensus 99 ~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~g~~~~~aPE~~~~-- 175 (285)
T cd05632 99 FEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-ESIRGRVGTVGYMAPEVLNN-- 175 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-CcccCCCCCcCccChHHhcC--
Confidence 578899999999999999999999999999999999999999999999998654322 22234578999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCC-CCCCCCCcCHHHHHHHHHhcccCCCCCCC---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPP-GLYRASNWSQHYVDFIAECLEKNPEHRPY--- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps--- 156 (488)
..++.++|+||+||++|+|++|..||.+.........+...... ....+..++..+.+|+.+||..+|++||+
T Consensus 176 ---~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 252 (285)
T cd05632 176 ---QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQE 252 (285)
T ss_pred ---CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcc
Confidence 56888999999999999999999999876654333333221111 11224567889999999999999999999
Q ss_pred --HHHHhcCcCCCCCCCCcccccc
Q psy9090 157 --MSELLEHPFITSLPENDLHLST 178 (488)
Q Consensus 157 --~~ell~hp~f~~~~~~~~~~~~ 178 (488)
+.+++.|+||+..++..+....
T Consensus 253 ~~~~~l~~~~~~~~~~~~~~~~~~ 276 (285)
T cd05632 253 EGAGEVKRHPFFRNMNFKRLEAGM 276 (285)
T ss_pred cChHHHHcChhhhcCCHHHHhcCc
Confidence 8899999999998876544333
No 164
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=6.6e-28 Score=233.05 Aligned_cols=160 Identities=33% Similarity=0.659 Sum_probs=132.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc---ccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK---KTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~---~~~~gt~~y~aPE~l~ 77 (488)
+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||+++......... ....+++.|+|||.+.
T Consensus 101 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 180 (263)
T cd06625 101 LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS 180 (263)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceec
Confidence 4678899999999999999999999999999999999999999999999987543221111 2346788999999997
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
+ ..++.++|+||+|+++|+|++|+.||..........+....... ...+...+..+.++|.+||..+|.+|||+
T Consensus 181 ~-----~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 254 (263)
T cd06625 181 G-----EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN-PQLPSHVSPDARNFLRRTFVENAKKRPSA 254 (263)
T ss_pred c-----CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC-CCCCccCCHHHHHHHHHHhhcCcccCCCH
Confidence 6 45888999999999999999999999877665555444433222 22345678999999999999999999999
Q ss_pred HHHhcCcCC
Q psy9090 158 SELLEHPFI 166 (488)
Q Consensus 158 ~ell~hp~f 166 (488)
.++++||||
T Consensus 255 ~~ll~~~~~ 263 (263)
T cd06625 255 EELLRHFFV 263 (263)
T ss_pred HHHhhCCCC
Confidence 999999997
No 165
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.95 E-value=3.5e-28 Score=237.96 Aligned_cols=162 Identities=26% Similarity=0.452 Sum_probs=127.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||+++.............+++.|+|||++.+.
T Consensus 96 ~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 174 (284)
T cd07839 96 IDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA- 174 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCC-
Confidence 5788999999999999999999999999999999999999999999999987654332333345678899999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCC-CCChHHHHHHHHhC---------------CC----CCC-------CCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFE-DMHPTRALFQIVRN---------------PP----PGL-------YRAS 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~-~~~~~~~~~~~~~~---------------~~----~~~-------~~~~ 133 (488)
..++.++|+||+||++|+|++|..|+. +.+.......+.+. +. +.. ....
T Consensus 175 ---~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (284)
T cd07839 175 ---KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVP 251 (284)
T ss_pred ---cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcc
Confidence 447889999999999999999988864 33333322222110 00 000 0112
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.++++++++|.+||..||.+|||+++++.||||
T Consensus 252 ~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 252 KLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 467889999999999999999999999999998
No 166
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=2.9e-28 Score=240.72 Aligned_cols=166 Identities=40% Similarity=0.772 Sum_probs=137.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++..............+++.|+|||.+.+
T Consensus 112 ~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 189 (297)
T cd06656 112 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-- 189 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcC--
Confidence 467889999999999999999999999999999999999999999999998765433222334568899999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+||++|+|++|..||....+......+.....+....+..++..+++|+.+||..+|++||++.++
T Consensus 190 ---~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 266 (297)
T cd06656 190 ---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKEL 266 (297)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 56788999999999999999999999876654443333333333333455678899999999999999999999999
Q ss_pred hcCcCCCCCCC
Q psy9090 161 LEHPFITSLPE 171 (488)
Q Consensus 161 l~hp~f~~~~~ 171 (488)
++||||+....
T Consensus 267 l~~~~~~~~~~ 277 (297)
T cd06656 267 LQHPFLKLAKP 277 (297)
T ss_pred hcCchhccccc
Confidence 99999987543
No 167
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=6.1e-28 Score=235.14 Aligned_cols=165 Identities=47% Similarity=0.975 Sum_probs=138.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||.|||+++++||||+|+||+++.++.++|+|||+++.............+++.|+|||.+.+
T Consensus 95 ~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-- 172 (274)
T cd06609 95 LDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQ-- 172 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhcc--
Confidence 578899999999999999999999999999999999999999999999999876544334445678899999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|.+||....+......+.....+.. ....++..+.+++.+||..+|++|||++++
T Consensus 173 ---~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~i 248 (274)
T cd06609 173 ---SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSL-EGNKFSKPFKDFVSLCLNKDPKERPSAKEL 248 (274)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCC-cccccCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 4588999999999999999999999987766555544444433322 222378999999999999999999999999
Q ss_pred hcCcCCCCCCC
Q psy9090 161 LEHPFITSLPE 171 (488)
Q Consensus 161 l~hp~f~~~~~ 171 (488)
++||||.....
T Consensus 249 l~~~~~~~~~~ 259 (274)
T cd06609 249 LKHKFIKKAKK 259 (274)
T ss_pred hhChhhcCCCc
Confidence 99999987543
No 168
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=1.1e-27 Score=230.48 Aligned_cols=159 Identities=29% Similarity=0.589 Sum_probs=136.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||+++.............|++.|+|||++..
T Consensus 98 ~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 175 (256)
T cd08529 98 LPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCED-- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcC--
Confidence 467888999999999999999999999999999999999999999999998766543333345578899999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||||+++|+|++|+.||...........+.....+.. +..++..+.++|.+||..+|++||++.++
T Consensus 176 ---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l 250 (256)
T cd08529 176 ---KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPV--SQMYSQQLAQLIDQCLTKDYRQRPDTFQL 250 (256)
T ss_pred ---CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--ccccCHHHHHHHHHHccCCcccCcCHHHH
Confidence 5678899999999999999999999988776666666665544332 33678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++|||+
T Consensus 251 l~~~~~ 256 (256)
T cd08529 251 LRNPSL 256 (256)
T ss_pred hhCCCC
Confidence 999995
No 169
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.95 E-value=6.9e-28 Score=235.67 Aligned_cols=164 Identities=32% Similarity=0.692 Sum_probs=132.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++...... ......||+.|+|||++.+
T Consensus 92 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~-- 167 (279)
T cd06619 92 IPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTYVGTNAYMAPERISG-- 167 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccCCCCChhhcCceeecC--
Confidence 467889999999999999999999999999999999999999999999998765432 2344578999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH------HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT------RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~------~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
..++.++|+||+||++|+|++|..||...... ....+......+.......+++++.++|.+||..+|.+|
T Consensus 168 ---~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 244 (279)
T cd06619 168 ---EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKER 244 (279)
T ss_pred ---CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhC
Confidence 56788999999999999999999999643211 111222222222222334578899999999999999999
Q ss_pred CCHHHHhcCcCCCCCCC
Q psy9090 155 PYMSELLEHPFITSLPE 171 (488)
Q Consensus 155 ps~~ell~hp~f~~~~~ 171 (488)
|+++++++||||.....
T Consensus 245 p~~~eil~~~~~~~~~~ 261 (279)
T cd06619 245 PAPENLMDHPFIVQYND 261 (279)
T ss_pred CCHHHHhcCcccccccC
Confidence 99999999999987643
No 170
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.95 E-value=7.7e-28 Score=237.71 Aligned_cols=164 Identities=37% Similarity=0.763 Sum_probs=138.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+
T Consensus 114 ~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 191 (297)
T cd06659 114 LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR-- 191 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHcc--
Confidence 468899999999999999999999999999999999999999999999998755433333345678999999999975
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+||++|+|++|+.||...........+.....+.......++..+.++|.+||..+|.+||++.++
T Consensus 192 ---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~l 268 (297)
T cd06659 192 ---TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQEL 268 (297)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 56788999999999999999999999877766555554443333333345678899999999999999999999999
Q ss_pred hcCcCCCCC
Q psy9090 161 LEHPFITSL 169 (488)
Q Consensus 161 l~hp~f~~~ 169 (488)
++||||...
T Consensus 269 l~~~~~~~~ 277 (297)
T cd06659 269 LDHPFLLQT 277 (297)
T ss_pred hhChhhccC
Confidence 999999764
No 171
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.95 E-value=1e-27 Score=235.80 Aligned_cols=168 Identities=29% Similarity=0.524 Sum_probs=141.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|++..++.++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++...... .....+++.|+|||.+.+
T Consensus 98 l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~-- 172 (290)
T cd05580 98 FPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TYTLCGTPEYLAPEIILS-- 172 (290)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CCCCCCCccccChhhhcC--
Confidence 578899999999999999999999999999999999999999999999998765433 334578899999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP----- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp----- 155 (488)
..++.++|+||||+++|+|++|..||..........++.... . ..+..++..++++|.+||..+|.+|+
T Consensus 173 ---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~ 246 (290)
T cd05580 173 ---KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK-V--RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKN 246 (290)
T ss_pred ---CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-c--cCCccCCHHHHHHHHHHccCCHHHccCcccC
Confidence 457789999999999999999999998777555455554332 1 23456789999999999999999999
Q ss_pred CHHHHhcCcCCCCCCCCccccccc
Q psy9090 156 YMSELLEHPFITSLPENDLHLSTV 179 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~~~~~~ 179 (488)
+++++++||||..++|..+.....
T Consensus 247 ~~~~l~~~~~~~~~~~~~~~~~~~ 270 (290)
T cd05580 247 GVNDIKNHPWFAGIDWIALLQRKI 270 (290)
T ss_pred CHHHHHcCcccccCCHHHHhhccC
Confidence 899999999999998876544333
No 172
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.95 E-value=1.2e-27 Score=235.50 Aligned_cols=163 Identities=23% Similarity=0.438 Sum_probs=131.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-CCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-DGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||.|||++|++||||+|+||+++. ++.+||+|||++..............+++.|+|||++.+.
T Consensus 107 ~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 186 (295)
T cd07837 107 LPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGS 186 (295)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCC
Confidence 478899999999999999999999999999999999998 8899999999987654332223334578899999988642
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC---CCCC----------------------CCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP---PPGL----------------------YRASN 134 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~---~~~~----------------------~~~~~ 134 (488)
..++.++|+||+|+++|+|++|.+||.+.........+.... .... .....
T Consensus 187 ----~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (295)
T cd07837 187 ----THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPD 262 (295)
T ss_pred ----CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccc
Confidence 457889999999999999999999998876655544443210 0000 00134
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFIT 167 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 167 (488)
+++.+.+||.+||..+|.+||++.+++.||||+
T Consensus 263 ~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 263 LSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred cCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 688899999999999999999999999999985
No 173
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.95 E-value=8.8e-28 Score=238.43 Aligned_cols=166 Identities=30% Similarity=0.435 Sum_probs=133.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||+|||++|++||||||+||+++.++.+||+|||++..............+++.|+|||++.+.
T Consensus 105 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 183 (309)
T cd07845 105 FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGC- 183 (309)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCC-
Confidence 5788999999999999999999999999999999999999999999999987654432222333467889999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC---CC---------------CC---------CCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP---PG---------------LY---------RAS 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~---~~---------------~~---------~~~ 133 (488)
..++.++|+||+||++|+|++|.+||.+.+.......+..... .. .. ...
T Consensus 184 ---~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (309)
T cd07845 184 ---TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFP 260 (309)
T ss_pred ---CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhcc
Confidence 4578899999999999999999999988776665544433100 00 00 001
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
..++.+.++|.+||..||++|||+++++.||||++.+
T Consensus 261 ~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 261 WLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 2478889999999999999999999999999998643
No 174
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.95 E-value=1.3e-27 Score=237.87 Aligned_cols=170 Identities=26% Similarity=0.482 Sum_probs=139.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC---------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--------------------- 59 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--------------------- 59 (488)
+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 100 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (316)
T cd05574 100 LSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSE 179 (316)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchh
Confidence 46788999999999999999999999999999999999999999999998765422110
Q ss_pred --------ccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCC
Q psy9090 60 --------KKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYR 131 (488)
Q Consensus 60 --------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 131 (488)
......||..|+|||++.+ ..++.++||||||+++|+|++|..||.+.........+..... ....
T Consensus 180 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~ 253 (316)
T cd05574 180 TFSEEPSFRSNSFVGTEEYIAPEVISG-----DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEV-TFPG 253 (316)
T ss_pred hhcccccCCCCCCcCccCCcCHHHHcC-----CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCc-cCCC
Confidence 1123468889999999976 5578899999999999999999999988776665555553322 2222
Q ss_pred CCCcCHHHHHHHHHhcccCCCCCCC----HHHHhcCcCCCCCCCCcccc
Q psy9090 132 ASNWSQHYVDFIAECLEKNPEHRPY----MSELLEHPFITSLPENDLHL 176 (488)
Q Consensus 132 ~~~~s~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~~~~~~~~~~ 176 (488)
....++.++++|.+||..+|++||| ++++++||||++.+|..+..
T Consensus 254 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~ 302 (316)
T cd05574 254 SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRH 302 (316)
T ss_pred ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhccc
Confidence 2336899999999999999999999 99999999999988876655
No 175
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=9.8e-28 Score=232.65 Aligned_cols=163 Identities=44% Similarity=0.884 Sum_probs=131.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..............|++.|+|||++...
T Consensus 103 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 181 (267)
T cd06645 103 LSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE- 181 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccc-
Confidence 5788999999999999999999999999999999999999999999999987654333333455789999999997421
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC-CC-CCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP-PP-GLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~-~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
....++.++|+|||||++|+|++|..||....+........... .+ .......++..+.++|.+||..+|++|||++
T Consensus 182 -~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 260 (267)
T cd06645 182 -RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAE 260 (267)
T ss_pred -cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHH
Confidence 11457889999999999999999999997665444333332221 11 1112235788999999999999999999999
Q ss_pred HHhcCcC
Q psy9090 159 ELLEHPF 165 (488)
Q Consensus 159 ell~hp~ 165 (488)
++++|||
T Consensus 261 ~ll~~~~ 267 (267)
T cd06645 261 KLLQHPF 267 (267)
T ss_pred HHhcCCC
Confidence 9999998
No 176
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.95 E-value=1.3e-27 Score=231.14 Aligned_cols=165 Identities=32% Similarity=0.575 Sum_probs=137.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++...... .......+++.|+|||.+..
T Consensus 90 l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~-- 166 (262)
T cd05572 90 FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG-QKTWTFCGTPEYVAPEIILN-- 166 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc-cccccccCCcCccChhHhcC--
Confidence 478889999999999999999999999999999999999999999999998766443 12334578899999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC--hHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC--
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMH--PTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY-- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps-- 156 (488)
..++.++|+||+|+++|+|++|..||.... .......+..... ....+...++.++++|.+||..+|++||+
T Consensus 167 ---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 242 (262)
T cd05572 167 ---KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG-KLEFPNYIDKAAKDLIKQLLRRNPEERLGNL 242 (262)
T ss_pred ---CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC-CCCCCcccCHHHHHHHHHHccCChhhCcCCc
Confidence 567889999999999999999999997766 4444444443221 22234445899999999999999999999
Q ss_pred ---HHHHhcCcCCCCCCCC
Q psy9090 157 ---MSELLEHPFITSLPEN 172 (488)
Q Consensus 157 ---~~ell~hp~f~~~~~~ 172 (488)
++++++||||++..|+
T Consensus 243 ~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 243 KGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred ccCHHHHhcChhhhCCCCC
Confidence 9999999999988775
No 177
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.95 E-value=9.8e-28 Score=231.57 Aligned_cols=163 Identities=50% Similarity=1.003 Sum_probs=134.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|++.+++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+....
T Consensus 98 l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~ 177 (262)
T cd06613 98 LSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVER 177 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccc
Confidence 57889999999999999999999999999999999999999999999999876554322334557888999999986521
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN--PPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
. ..++.++|+||+|+++|+|++|.+||....+......+... ..+.......++.++.+++.+||..+|..|||+.
T Consensus 178 ~--~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 255 (262)
T cd06613 178 K--GGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTAT 255 (262)
T ss_pred c--CCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHH
Confidence 1 26788999999999999999999999887766555544443 2222223345678899999999999999999999
Q ss_pred HHhcCcC
Q psy9090 159 ELLEHPF 165 (488)
Q Consensus 159 ell~hp~ 165 (488)
+++.|+|
T Consensus 256 ~il~~~~ 262 (262)
T cd06613 256 KLLQHPF 262 (262)
T ss_pred HHhcCCC
Confidence 9999998
No 178
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=7.5e-28 Score=241.55 Aligned_cols=174 Identities=21% Similarity=0.421 Sum_probs=138.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ......||+.|+|||++.+.
T Consensus 99 l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (331)
T cd05624 99 LPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAM 178 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhcc
Confidence 47889999999999999999999999999999999999999999999999876543222 12335799999999998753
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCC-CCCCcCHHHHHHHHHhcccCCCC--CC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLY-RASNWSQHYVDFIAECLEKNPEH--RP 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~-~~~~~s~~~~~li~~~L~~dP~~--Rp 155 (488)
......++.++|+||+||++|+|++|+.||...........+..... ...+ ....++..++++|.+||..++.+ |+
T Consensus 179 ~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~ 258 (331)
T cd05624 179 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQN 258 (331)
T ss_pred ccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCC
Confidence 22224578899999999999999999999988776665555544321 1111 12346899999999999876654 46
Q ss_pred CHHHHhcCcCCCCCCCCcc
Q psy9090 156 YMSELLEHPFITSLPENDL 174 (488)
Q Consensus 156 s~~ell~hp~f~~~~~~~~ 174 (488)
+++++++||||..++|...
T Consensus 259 ~~~~~~~h~~f~~~~~~~~ 277 (331)
T cd05624 259 GIEDFKKHAFFEGIDWENI 277 (331)
T ss_pred CHHHHhcCCCcCCCCHHHH
Confidence 8999999999999888754
No 179
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=7.6e-28 Score=250.35 Aligned_cols=163 Identities=20% Similarity=0.401 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
|++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+
T Consensus 257 l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~ 336 (461)
T PHA03211 257 LGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAG 336 (461)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcC
Confidence 57889999999999999999999999999999999999999999999999876432211 1234579999999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC-------hHHHHHHHHhCCC---CCC-------------------
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH-------PTRALFQIVRNPP---PGL------------------- 129 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~-------~~~~~~~~~~~~~---~~~------------------- 129 (488)
..++.++|||||||++|+|++|..|+.... ....+.+++.... ...
T Consensus 337 -----~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 411 (461)
T PHA03211 337 -----DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARN 411 (461)
T ss_pred -----CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcc
Confidence 568899999999999999999876653221 0122222222110 000
Q ss_pred ----CC------CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCC
Q psy9090 130 ----YR------ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITS 168 (488)
Q Consensus 130 ----~~------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 168 (488)
.. ...++..+.+||.+||..||.+|||+.|+|+||||++
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 412 RRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred cCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 00 0123568899999999999999999999999999974
No 180
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.95 E-value=8e-28 Score=236.02 Aligned_cols=169 Identities=38% Similarity=0.677 Sum_probs=133.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHEN-HVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++...... .......|++.|+|||++...
T Consensus 104 l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~ 182 (288)
T cd06616 104 IPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS-IAKTRDAGCRPYMAPERIDPS 182 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC-CccccccCccCccCHHHhccc
Confidence 46788999999999999999974 9999999999999999999999999998765432 222334688899999998752
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH-HHHHHHHhCCCCCCCC--CCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT-RALFQIVRNPPPGLYR--ASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~-~~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
. ...++.++|+||+||++|+|++|++||...... ....+......+.... +..++..+.+||.+||..+|++|||
T Consensus 183 ~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt 260 (288)
T cd06616 183 A--RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK 260 (288)
T ss_pred c--ccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC
Confidence 1 135788999999999999999999999765421 2223333332222221 2347899999999999999999999
Q ss_pred HHHHhcCcCCCCCCCC
Q psy9090 157 MSELLEHPFITSLPEN 172 (488)
Q Consensus 157 ~~ell~hp~f~~~~~~ 172 (488)
+++++.||||+...+.
T Consensus 261 ~~~i~~~~~~~~~~~~ 276 (288)
T cd06616 261 YKELLEHPFIKDYEER 276 (288)
T ss_pred HHHHhcChhhhchhhc
Confidence 9999999999876544
No 181
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.95 E-value=1.2e-27 Score=231.55 Aligned_cols=162 Identities=44% Similarity=0.860 Sum_probs=134.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc----cccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK----KKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~l 76 (488)
+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||++......... .....|++.|+|||++
T Consensus 99 ~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~ 178 (267)
T cd06610 99 LDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM 178 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHH
Confidence 467889999999999999999999999999999999999999999999998765433221 2344688999999998
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCC---CCcCHHHHHHHHHhcccCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRA---SNWSQHYVDFIAECLEKNPEH 153 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~li~~~L~~dP~~ 153 (488)
... ..++.++|+||+||++|+|++|+.||.................+..... ..+++.+.+++.+||..||++
T Consensus 179 ~~~----~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 254 (267)
T cd06610 179 EQV----HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSK 254 (267)
T ss_pred ccc----cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhh
Confidence 752 3578899999999999999999999988776665555555443333222 356899999999999999999
Q ss_pred CCCHHHHhcCcCC
Q psy9090 154 RPYMSELLEHPFI 166 (488)
Q Consensus 154 Rps~~ell~hp~f 166 (488)
|||+.+++.||||
T Consensus 255 Rp~~~~ll~~p~~ 267 (267)
T cd06610 255 RPTAEELLKHKFF 267 (267)
T ss_pred CcCHHHHhhCCCC
Confidence 9999999999998
No 182
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=2.1e-28 Score=235.84 Aligned_cols=161 Identities=36% Similarity=0.706 Sum_probs=129.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhc-cc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMR-CG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~-~~ 79 (488)
+++.+++.++.||+.||.+||++|++|+||||+||+++.++.++|+|||.+..............+++.|+|||++. +
T Consensus 95 ~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 173 (260)
T PF00069_consen 95 LSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQG- 173 (260)
T ss_dssp BBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTT-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 46789999999999999999999999999999999999999999999999875422223445667899999999987 3
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh---HHHHHHHHhCCCCC-CCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP---TRALFQIVRNPPPG-LYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~---~~~~~~~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
..++.++|+||||+++|+|++|..||..... .....+......+. .......++.+.++|.+||..||++||
T Consensus 174 ----~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~ 249 (260)
T PF00069_consen 174 ----KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRP 249 (260)
T ss_dssp ----SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGST
T ss_pred ----ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCc
Confidence 5678999999999999999999999988732 22222222211110 001111248999999999999999999
Q ss_pred CHHHHhcCcCC
Q psy9090 156 YMSELLEHPFI 166 (488)
Q Consensus 156 s~~ell~hp~f 166 (488)
|+.++++||||
T Consensus 250 ~~~~l~~~~~~ 260 (260)
T PF00069_consen 250 SAEELLKHPWF 260 (260)
T ss_dssp THHHHHTSGGG
T ss_pred CHHHHhcCCCC
Confidence 99999999997
No 183
>KOG0587|consensus
Probab=99.95 E-value=2.6e-28 Score=254.58 Aligned_cols=168 Identities=54% Similarity=1.024 Sum_probs=161.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|.|+.+++|++.++.|+.+||.+.++|||||-.|||++.+|.|||+|||++...........+.+|||.|||||++.+.+
T Consensus 120 l~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e 199 (953)
T KOG0587|consen 120 LKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDE 199 (953)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeeccc
Confidence 57899999999999999999999999999999999999999999999999998888777888999999999999999877
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
.....|+..+|+||||++..||.-|.+|+.++.+...++.+.++++|.+..+..|++++.++|..||.+|-.+||+..++
T Consensus 200 ~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~l 279 (953)
T KOG0587|consen 200 SPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEEL 279 (953)
T ss_pred CCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhh
Confidence 76778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcCCCC
Q psy9090 161 LEHPFITS 168 (488)
Q Consensus 161 l~hp~f~~ 168 (488)
|+|||++.
T Consensus 280 l~hpFi~e 287 (953)
T KOG0587|consen 280 LKHPFITE 287 (953)
T ss_pred ccCCcccc
Confidence 99999984
No 184
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.95 E-value=1.4e-27 Score=230.60 Aligned_cols=163 Identities=31% Similarity=0.506 Sum_probs=135.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++..... .....+++.|+|||.+.+
T Consensus 94 ~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~~~y~~pe~~~~-- 167 (260)
T cd05611 94 LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGTPDYLAPETILG-- 167 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCCCcCccChhhhcC--
Confidence 47889999999999999999999999999999999999999999999998865432 234568899999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCCCCCCcCHHHHHHHHHhcccCCCCCCC---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLYRASNWSQHYVDFIAECLEKNPEHRPY--- 156 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rps--- 156 (488)
..++.++|+||+|+++|+|++|..||...........+..... ........+++.+.++|.+||..+|++||+
T Consensus 168 ---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 244 (260)
T cd05611 168 ---VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANG 244 (260)
T ss_pred ---CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCc
Confidence 4478899999999999999999999988776555444433221 111123357899999999999999999995
Q ss_pred HHHHhcCcCCCCCCCC
Q psy9090 157 MSELLEHPFITSLPEN 172 (488)
Q Consensus 157 ~~ell~hp~f~~~~~~ 172 (488)
+++++.||||+.+.|+
T Consensus 245 ~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 245 YQEIKSHPFFKSINWD 260 (260)
T ss_pred HHHHHcChHhhcCCCC
Confidence 5799999999988774
No 185
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.95 E-value=1.9e-27 Score=239.11 Aligned_cols=156 Identities=28% Similarity=0.514 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
|++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ......+++.|+|||++.+
T Consensus 171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 250 (338)
T cd05102 171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD 250 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc
Confidence 45778899999999999999999999999999999999999999999999875432211 1223345678999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|+|++ |..||.+..........+..... ...+...++.+.+++.+||..||++|||+
T Consensus 251 -----~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 324 (338)
T cd05102 251 -----KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR-MRAPENATPEIYRIMLACWQGDPKERPTF 324 (338)
T ss_pred -----CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence 568899999999999999996 99999876544444343333221 22345678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 325 ~el~~ 329 (338)
T cd05102 325 SALVE 329 (338)
T ss_pred HHHHH
Confidence 99975
No 186
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.95 E-value=1.4e-27 Score=233.26 Aligned_cols=173 Identities=31% Similarity=0.497 Sum_probs=137.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+...... .......++..|+|||++.+
T Consensus 92 ~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~y~~PE~~~~-- 168 (277)
T cd05577 92 FPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRAGTPGYMAPEVLQG-- 168 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC-CccccccCCCCcCCHHHhcC--
Confidence 578899999999999999999999999999999999999999999999988755432 22334567889999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCCCCCCcCHHHHHHHHHhcccCCCCCC----
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLYRASNWSQHYVDFIAECLEKNPEHRP---- 155 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rp---- 155 (488)
..++.++|+||+|+++|+|++|+.||...........+..... .....+..+++.+.++|.+||..+|.+||
T Consensus 169 ---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 169 ---EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ---CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence 4578899999999999999999999976543211122221111 11123456799999999999999999999
Q ss_pred -CHHHHhcCcCCCCCCCCccccccc
Q psy9090 156 -YMSELLEHPFITSLPENDLHLSTV 179 (488)
Q Consensus 156 -s~~ell~hp~f~~~~~~~~~~~~~ 179 (488)
++.++++||||+.++|........
T Consensus 246 ~~~~~ll~h~~~~~~~~~~~~~~~~ 270 (277)
T cd05577 246 GSADEVREHPLFKDLNWRRLEAGML 270 (277)
T ss_pred ccHHHHHhChhhhcCChhhhhcCCC
Confidence 888899999999988876544333
No 187
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.95 E-value=2.3e-27 Score=232.12 Aligned_cols=162 Identities=30% Similarity=0.555 Sum_probs=130.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++..............++..|+|||++.+.
T Consensus 97 ~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~- 175 (286)
T cd07847 97 VPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGD- 175 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCC-
Confidence 5788999999999999999999999999999999999999999999999987665432233345678899999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC---------------------CCCCC-------CC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP---------------------PPGLY-------RA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~---------------------~~~~~-------~~ 132 (488)
..++.++|+||+|+++|+|++|.+||.+.........+.... .+... ..
T Consensus 176 ---~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (286)
T cd07847 176 ---TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKF 252 (286)
T ss_pred ---CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHh
Confidence 457889999999999999999999998776554443332100 00000 01
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
..++..+.+||.+||..+|++||++.+++.||||
T Consensus 253 ~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 253 PNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 2457889999999999999999999999999998
No 188
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.95 E-value=2.2e-27 Score=230.07 Aligned_cols=159 Identities=35% Similarity=0.716 Sum_probs=132.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC------ccccccCCCccccch
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD------KKKTFLGSPSWMAPE 74 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~------~~~~~~gt~~y~aPE 74 (488)
+++..++.++.|++.||+|||++|++||||+|+||+++.++.++|+|||+++....... ......|++.|+|||
T Consensus 103 l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe 182 (267)
T cd06628 103 FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPE 182 (267)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChh
Confidence 46788999999999999999999999999999999999999999999999876542111 112345788999999
Q ss_pred hhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 75 IMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 75 ~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
.+.+ ..++.++|+||+||++|+|++|..||...........+.....+. .+..++..+.++|++||..+|.+|
T Consensus 183 ~~~~-----~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R 255 (267)
T cd06628 183 VVKQ-----TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPE--IPSNISSEAIDFLEKTFEIDHNKR 255 (267)
T ss_pred Hhcc-----CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCc--CCcccCHHHHHHHHHHccCCchhC
Confidence 9875 567889999999999999999999998876655555544433322 245678999999999999999999
Q ss_pred CCHHHHhcCcCC
Q psy9090 155 PYMSELLEHPFI 166 (488)
Q Consensus 155 ps~~ell~hp~f 166 (488)
|++.++++||||
T Consensus 256 p~~~~il~~~~~ 267 (267)
T cd06628 256 PTAAELLKHPFL 267 (267)
T ss_pred cCHHHHhhCCCC
Confidence 999999999997
No 189
>KOG0608|consensus
Probab=99.95 E-value=3.3e-28 Score=244.87 Aligned_cols=169 Identities=25% Similarity=0.495 Sum_probs=136.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccc--cc---------------------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA--NT--------------------- 57 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~--~~--------------------- 57 (488)
|+|+.+++|+.++..|+++.|+.|+|||||||+|||||.+|+|||+|||+|+-+. +.
T Consensus 726 FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~ 805 (1034)
T KOG0608|consen 726 FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEW 805 (1034)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhh
Confidence 5789999999999999999999999999999999999999999999999987321 00
Q ss_pred -------------------cCccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHH
Q psy9090 58 -------------------FDKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRAL 118 (488)
Q Consensus 58 -------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~ 118 (488)
.......+||+.|+|||++.. .+|+..||+||.|||||+|+.|++||-+..+.+..
T Consensus 806 ~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-----~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq 880 (1034)
T KOG0608|consen 806 ADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-----TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQ 880 (1034)
T ss_pred ccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-----cCccccchhhHhhHHHHHHhhCCCCccCCCCCcce
Confidence 000123589999999999975 78999999999999999999999999877765544
Q ss_pred HHHHh-CCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC---CHHHHhcCcCCCCCCCCccc
Q psy9090 119 FQIVR-NPPPGLYRASNWSQHYVDFIAECLEKNPEHRP---YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 119 ~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp---s~~ell~hp~f~~~~~~~~~ 175 (488)
.+++. ...-.+....++|+++.+||.++. .+++.|+ .++++..||||+.++|..+.
T Consensus 881 ~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDfsslR 940 (1034)
T KOG0608|consen 881 YKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDFSSLR 940 (1034)
T ss_pred eeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccchHhhh
Confidence 33321 111223334678999999999875 5688887 46789999999999998743
No 190
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.95 E-value=1.8e-27 Score=232.89 Aligned_cols=162 Identities=26% Similarity=0.447 Sum_probs=130.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++|++||||+|+||+++.++.+||+|||++..............+++.|+|||++.+.
T Consensus 97 l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 175 (284)
T cd07860 97 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC- 175 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecC-
Confidence 4678899999999999999999999999999999999999999999999987654332223344578899999988652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCC-----------------C---------CCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPG-----------------L---------YRASN 134 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~-----------------~---------~~~~~ 134 (488)
..++.++|+||||+++|+|+||+.||..........++......+ . .....
T Consensus 176 ---~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd07860 176 ---KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPP 252 (284)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHccc
Confidence 346788999999999999999999998776555444443211000 0 00124
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
+++.++++|.+||..||.+|||+.+++.||||
T Consensus 253 ~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 253 LDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 57888999999999999999999999999998
No 191
>KOG0607|consensus
Probab=99.95 E-value=1.4e-27 Score=223.58 Aligned_cols=172 Identities=27% Similarity=0.453 Sum_probs=133.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCc---EEEEecCCccccccc-------cCccccccCCCcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGE---VKIVDFGLSRETANT-------FDKKKTFLGSPSW 70 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~---vkL~Dfg~a~~~~~~-------~~~~~~~~gt~~y 70 (488)
|+|.++..+++.|+.||.+||.+||.||||||+|||-.+..+ ||||||.+.....-. .....+.+|+..|
T Consensus 173 F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEf 252 (463)
T KOG0607|consen 173 FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEF 252 (463)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhh
Confidence 589999999999999999999999999999999999976654 899999887543211 1223466899999
Q ss_pred ccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh--------------HHHHHHHHhCCCCCCCC--CCC
Q psy9090 71 MAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP--------------TRALFQIVRNPPPGLYR--ASN 134 (488)
Q Consensus 71 ~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~--------------~~~~~~~~~~~~~~~~~--~~~ 134 (488)
||||+..--......|+.++|.||||+|+|.|++|.+||.+.-. ...++.-++.....++. ...
T Consensus 253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah 332 (463)
T KOG0607|consen 253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH 332 (463)
T ss_pred cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHH
Confidence 99998754333346789999999999999999999999965311 12233333333222221 223
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
+|.++++||..+|..++.+|.++.++++|||+.....+
T Consensus 333 IS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 333 ISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred hhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 58999999999999999999999999999999887554
No 192
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1.1e-27 Score=253.08 Aligned_cols=165 Identities=24% Similarity=0.434 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCGHK 81 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~ 81 (488)
..+++.++.||+.||.|||++|||||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+
T Consensus 266 ~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--- 342 (501)
T PHA03210 266 LKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG--- 342 (501)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC---
Confidence 456788999999999999999999999999999999999999999999976543211 2234679999999999976
Q ss_pred CCCCCCCccchhhhHHHHHHHhcCCCC-CCCC--ChHHHHHHHHhCCC------C-----------------------CC
Q psy9090 82 EVDGYDNRIDVWALGITAIELGDGKPP-FEDM--HPTRALFQIVRNPP------P-----------------------GL 129 (488)
Q Consensus 82 ~~~~~~~~~DiwslGvil~elltg~~P-f~~~--~~~~~~~~~~~~~~------~-----------------------~~ 129 (488)
..|+.++|||||||++|+|++|..| |... .+...+.+++.... + ..
T Consensus 343 --~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~ 420 (501)
T PHA03210 343 --DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPL 420 (501)
T ss_pred --CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhH
Confidence 5688999999999999999998754 4322 22223333222100 0 00
Q ss_pred CCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 130 YRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 130 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
.....++..+.++|.+||..||.+|||+.++|.||||......
T Consensus 421 ~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~ 463 (501)
T PHA03210 421 IRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEE 463 (501)
T ss_pred HHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCch
Confidence 0112346677889999999999999999999999999876543
No 193
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=2.6e-27 Score=230.23 Aligned_cols=159 Identities=26% Similarity=0.504 Sum_probs=129.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-cEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-EVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++.+++.++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++...... ....+++.|+|||++.+
T Consensus 106 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 180 (267)
T PHA03390 106 LSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP----SCYDGTLDYFSPEKIKG- 180 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC----ccCCCCCcccChhhhcC-
Confidence 57899999999999999999999999999999999999998 9999999998755332 23468899999999975
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHH-HHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC-H
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRA-LFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY-M 157 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps-~ 157 (488)
..++.++|+||+|+++|+|++|..||........ ...+..........+..+++.+.++|.+||+.+|.+||+ +
T Consensus 181 ----~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 256 (267)
T PHA03390 181 ----HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNY 256 (267)
T ss_pred ----CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchH
Confidence 5678899999999999999999999975543221 111211112222334568999999999999999999996 6
Q ss_pred HHHhcCcCCCC
Q psy9090 158 SELLEHPFITS 168 (488)
Q Consensus 158 ~ell~hp~f~~ 168 (488)
+++++||||+.
T Consensus 257 ~~~l~h~~~~~ 267 (267)
T PHA03390 257 NEIIKHPFLKI 267 (267)
T ss_pred HHHhcCCcccC
Confidence 99999999963
No 194
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=2.6e-27 Score=237.82 Aligned_cols=162 Identities=31% Similarity=0.670 Sum_probs=128.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHEN-HVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||++...... ......|++.|+|||++.+
T Consensus 100 ~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~- 176 (333)
T cd06650 100 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQG- 176 (333)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--ccccCCCCccccCHHHhcC-
Confidence 46788899999999999999985 7999999999999999999999999998755332 2234578999999999976
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHH---------------------------------------
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQ--------------------------------------- 120 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~--------------------------------------- 120 (488)
..++.++|+|||||++|+|++|+.||...........
T Consensus 177 ----~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (333)
T cd06650 177 ----THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIF 252 (333)
T ss_pred ----CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHH
Confidence 5688899999999999999999999976543222110
Q ss_pred -----HHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 121 -----IVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 121 -----~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
+.....+.. ....++.++++||.+||..||++|||+.+++.||||+...
T Consensus 253 ~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 253 ELLDYIVNEPPPKL-PSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred HHHHHHhcCCCccC-CCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 011111111 1123578899999999999999999999999999998643
No 195
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=3.5e-27 Score=230.42 Aligned_cols=160 Identities=22% Similarity=0.431 Sum_probs=128.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||+|||++|++||||+|+||+++. +.+||+|||+++..... .......+++.|+|||.+...
T Consensus 97 ~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~- 173 (282)
T cd07831 97 LPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK-PPYTEYISTRWYRAPECLLTD- 173 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC-CCcCCCCCCcccCChhHhhcC-
Confidence 478899999999999999999999999999999999999 99999999998765432 222344678999999987542
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh---CCCC------------CCC-----------CCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR---NPPP------------GLY-----------RASN 134 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~---~~~~------------~~~-----------~~~~ 134 (488)
..++.++|+||+||++|+|++|.+||.+.+.......+.. .+.+ ... ....
T Consensus 174 ---~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (282)
T cd07831 174 ---GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPN 250 (282)
T ss_pred ---CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHccc
Confidence 4467899999999999999999999988765444333321 0000 000 0124
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.+..+.++|.+||.++|++||+++++++||||
T Consensus 251 ~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 251 ASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 57899999999999999999999999999997
No 196
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.95 E-value=3.7e-27 Score=227.45 Aligned_cols=165 Identities=30% Similarity=0.552 Sum_probs=136.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--------ccccccCCCcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--------KKKTFLGSPSWMA 72 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--------~~~~~~gt~~y~a 72 (488)
+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........ ......+++.|+|
T Consensus 90 ~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
T cd05579 90 LDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIA 169 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccC
Confidence 47889999999999999999999999999999999999999999999999875432211 2234467889999
Q ss_pred chhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 73 PEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 73 PE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
||.+.. ..++.++|+||||+++|++++|..||...........+..... ..+....++..+.+++.+||..+|.
T Consensus 170 Pe~~~~-----~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~ 243 (265)
T cd05579 170 PEVILG-----QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI-EWPEDVEVSDEAIDLISKLLVPDPE 243 (265)
T ss_pred HHHhcC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc-CCCccccCCHHHHHHHHHHhcCCHh
Confidence 999875 4477899999999999999999999988776665555544222 2222223589999999999999999
Q ss_pred CCCCH---HHHhcCcCCCCCCC
Q psy9090 153 HRPYM---SELLEHPFITSLPE 171 (488)
Q Consensus 153 ~Rps~---~ell~hp~f~~~~~ 171 (488)
+|||+ .++++||||++++|
T Consensus 244 ~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 244 KRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred hcCCCccHHHHhcCccccCCCC
Confidence 99999 99999999998876
No 197
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.95 E-value=3.6e-27 Score=237.05 Aligned_cols=167 Identities=31% Similarity=0.546 Sum_probs=130.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC---ccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD---KKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~l~ 77 (488)
+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++........ ......|++.|+|||.+.
T Consensus 103 l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 182 (336)
T cd07849 103 LSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML 182 (336)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhh
Confidence 57889999999999999999999999999999999999999999999999876533211 122346889999999875
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh---CCC--------------------CCCC----
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR---NPP--------------------PGLY---- 130 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~---~~~--------------------~~~~---- 130 (488)
+. ..++.++|+||+||++|+|++|++||.+.........+.. .+. ....
T Consensus 183 ~~----~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (336)
T cd07849 183 NS----KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWN 258 (336)
T ss_pred CC----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHH
Confidence 42 4578899999999999999999999977654332222111 000 0000
Q ss_pred -CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 131 -RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 131 -~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
.....++.+.++|.+||..+|++|||+.++++||||+....
T Consensus 259 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 259 KLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 01235788999999999999999999999999999997643
No 198
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.95 E-value=2.3e-27 Score=231.95 Aligned_cols=169 Identities=38% Similarity=0.696 Sum_probs=134.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHEN-HVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||+|||++ +++||||||+||+++.++.+||+|||++...... .......++..|+|||.+.+.
T Consensus 100 ~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~ 178 (283)
T cd06617 100 IPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS-VAKTIDAGCKPYMAPERINPE 178 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc-cccccccCCccccChhhcCCc
Confidence 47889999999999999999997 9999999999999999999999999998765432 122335688899999988642
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH-PTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
. ....++.++|+||+||++|+|++|+.||.... ....+........+.. ....+|.++.++|.+||..+|.+||++.
T Consensus 179 ~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~ 256 (283)
T cd06617 179 L-NQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQL-PAEKFSPEFQDFVNKCLKKNYKERPNYP 256 (283)
T ss_pred c-cccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCC-CccccCHHHHHHHHHHccCChhhCcCHH
Confidence 1 12457889999999999999999999996532 2333444444333322 2345789999999999999999999999
Q ss_pred HHhcCcCCCCCCCC
Q psy9090 159 ELLEHPFITSLPEN 172 (488)
Q Consensus 159 ell~hp~f~~~~~~ 172 (488)
++++||||.....+
T Consensus 257 ~il~~~~~~~~~~~ 270 (283)
T cd06617 257 ELLQHPFFELHLSK 270 (283)
T ss_pred HHhcCchhhhcccc
Confidence 99999999875443
No 199
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.95 E-value=3.9e-27 Score=228.16 Aligned_cols=161 Identities=35% Similarity=0.696 Sum_probs=131.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc------cCccccccCCCccccch
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT------FDKKKTFLGSPSWMAPE 74 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~------~~~~~~~~gt~~y~aPE 74 (488)
+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++...... ........|++.|+|||
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 178 (265)
T cd06631 99 LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPE 178 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChh
Confidence 468889999999999999999999999999999999999999999999988754211 11123446889999999
Q ss_pred hhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 75 IMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 75 ~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
++.+ ..++.++|+||||+++|+|++|..||...........+..........+..++..+.++|++||..+|.+|
T Consensus 179 ~~~~-----~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 253 (265)
T cd06631 179 VINE-----SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHER 253 (265)
T ss_pred hhcC-----CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccC
Confidence 9876 56788999999999999999999999876655444443332111112345678999999999999999999
Q ss_pred CCHHHHhcCcCC
Q psy9090 155 PYMSELLEHPFI 166 (488)
Q Consensus 155 ps~~ell~hp~f 166 (488)
|++.++++||||
T Consensus 254 p~~~~~l~~~~~ 265 (265)
T cd06631 254 PSALQLLRHDFL 265 (265)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
No 200
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95 E-value=2.9e-27 Score=239.38 Aligned_cols=162 Identities=25% Similarity=0.505 Sum_probs=129.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||++...... .......+++.|+|||.+.+
T Consensus 115 l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-- 191 (353)
T cd07850 115 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILG-- 191 (353)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC-CCCCCCcccccccCHHHHhC--
Confidence 467889999999999999999999999999999999999999999999999765432 22334568899999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC---------------------C------------
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP---------------------P------------ 127 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~---------------------~------------ 127 (488)
..++.++|+|||||++|+|++|+.||...+.......+..... +
T Consensus 192 ---~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
T cd07850 192 ---MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFP 268 (353)
T ss_pred ---CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCc
Confidence 5688999999999999999999999987654433333221000 0
Q ss_pred CCCC-------CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCC
Q psy9090 128 GLYR-------ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITS 168 (488)
Q Consensus 128 ~~~~-------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 168 (488)
.... +...++.++++|.+||..||++|||+.++|.||||+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 269 DVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred ccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 0000 1123567899999999999999999999999999974
No 201
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.95 E-value=2.7e-27 Score=232.91 Aligned_cols=162 Identities=27% Similarity=0.477 Sum_probs=130.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++..............+++.|+|||.+.+.
T Consensus 103 l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~- 181 (293)
T cd07843 103 FLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGA- 181 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCC-
Confidence 5788999999999999999999999999999999999999999999999987665432333445678899999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCC----------------------------CCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPP----------------------------GLYRA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~ 132 (488)
..++.++|+||+|+++|+|++|.+||..........++...... ....+
T Consensus 182 ---~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (293)
T cd07843 182 ---KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFP 258 (293)
T ss_pred ---ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhcccc
Confidence 34678999999999999999999999877655444433221000 00011
Q ss_pred CC-cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 133 SN-WSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 133 ~~-~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.. +++.+.++|++||..+|++|||+.+++.||||
T Consensus 259 ~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 259 ALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 11 57889999999999999999999999999998
No 202
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.95 E-value=3.7e-27 Score=227.01 Aligned_cols=159 Identities=31% Similarity=0.612 Sum_probs=135.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..............|++.|+|||++.+
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-- 175 (256)
T cd08218 98 FPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICEN-- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCC--
Confidence 467888999999999999999999999999999999999999999999998765443222334568889999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+||++|+|++|..||...........+..+..+. .+..++.++.++|.+||..+|.+||++.++
T Consensus 176 ---~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~v 250 (256)
T cd08218 176 ---RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP--VSSHYSYDLRNLVSQLFKRNPRDRPSVNSI 250 (256)
T ss_pred ---CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC--CcccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 557789999999999999999999998877666666666554333 245678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++||||
T Consensus 251 l~~~~~ 256 (256)
T cd08218 251 LEKNFI 256 (256)
T ss_pred hhCcCC
Confidence 999997
No 203
>KOG0671|consensus
Probab=99.95 E-value=6.1e-28 Score=231.43 Aligned_cols=162 Identities=25% Similarity=0.474 Sum_probs=129.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc--------------------CCcEEEEecCCccccccccCc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK--------------------DGEVKIVDFGLSRETANTFDK 60 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~--------------------~~~vkL~Dfg~a~~~~~~~~~ 60 (488)
++-..++.+.+|+++++++||+.+++|.||||+|||+.+ +..|+++|||.++.... .
T Consensus 189 fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e---~ 265 (415)
T KOG0671|consen 189 FPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE---H 265 (415)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc---C
Confidence 466889999999999999999999999999999999842 33589999999976543 3
Q ss_pred cccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHH---HHHHHHhCCCCCCCC------
Q psy9090 61 KKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTR---ALFQIVRNPPPGLYR------ 131 (488)
Q Consensus 61 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~---~~~~~~~~~~~~~~~------ 131 (488)
..+.+.|..|+|||++.+ -+++..|||||+||||+|+.+|...|......+ .+.+++. +.|....
T Consensus 266 hs~iVsTRHYRAPEViLg-----LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~ 339 (415)
T KOG0671|consen 266 HSTIVSTRHYRAPEVILG-----LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKE 339 (415)
T ss_pred cceeeeccccCCchheec-----cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhH
Confidence 467789999999999998 789999999999999999999999998766544 3333332 1111000
Q ss_pred -------------------------CC----------CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 132 -------------------------AS----------NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 132 -------------------------~~----------~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
+. .--.++.+||++||..||.+|+|+.|+|.||||+....
T Consensus 340 Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~~ 414 (415)
T KOG0671|consen 340 KYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLTP 414 (415)
T ss_pred hhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCCC
Confidence 00 00134689999999999999999999999999987643
No 204
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=3.8e-27 Score=235.97 Aligned_cols=167 Identities=32% Similarity=0.635 Sum_probs=127.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-------ccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-------KKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aP 73 (488)
+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+........ ......++..|+||
T Consensus 98 l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 177 (327)
T cd08227 98 MSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSP 177 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccCh
Confidence 57888999999999999999999999999999999999999999999986543221101 11223567789999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCC------------------------
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGL------------------------ 129 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~------------------------ 129 (488)
|++.+. ...|+.++||||+||++|+|++|..||.................+..
T Consensus 178 E~~~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T cd08227 178 EVLQQN---LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGL 254 (327)
T ss_pred HHhhcc---cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCC
Confidence 998652 13588999999999999999999999976554333322221111000
Q ss_pred -------------------CCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 130 -------------------YRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 130 -------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
.....+++.+.+||.+||..||++|||++++++||||+.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 255 GESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred CcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00123467899999999999999999999999999998753
No 205
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.95 E-value=5.4e-27 Score=231.30 Aligned_cols=167 Identities=26% Similarity=0.396 Sum_probs=133.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..............+++.|+|||.+.+.
T Consensus 99 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 177 (298)
T cd07841 99 LTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA- 177 (298)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCC-
Confidence 5788999999999999999999999999999999999999999999999987665433333344567899999998542
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC---C-------------------C---CCCCCCc
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP---P-------------------G---LYRASNW 135 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~---~-------------------~---~~~~~~~ 135 (488)
..++.++|+||+||++|+|++|.+||.+........++..... . . .......
T Consensus 178 ---~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
T cd07841 178 ---RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAA 254 (298)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccc
Confidence 4578899999999999999999988877665544444332100 0 0 0011234
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 136 SQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 136 s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
+..+.++|.+||..+|++|||+.+++.||||++.+.
T Consensus 255 ~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 255 SDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA 290 (298)
T ss_pred cHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence 788999999999999999999999999999998553
No 206
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.94 E-value=4.6e-27 Score=228.00 Aligned_cols=160 Identities=36% Similarity=0.719 Sum_probs=129.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc---CccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---DKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~l~ 77 (488)
+++..++.++.||+.||+|||+++++||||+|+||+++.++.++|+|||++....... .......++..|+|||.+.
T Consensus 103 l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 182 (266)
T cd06651 103 LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS 182 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhC
Confidence 4678889999999999999999999999999999999999999999999987543211 1122345788999999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
+ ..++.++|+||+||++|+|++|+.||..........+.......+ ..+...++.+++++ +||..+|++||++
T Consensus 183 ~-----~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li-~~~~~~p~~Rp~~ 255 (266)
T cd06651 183 G-----EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP-QLPSHISEHARDFL-GCIFVEARHRPSA 255 (266)
T ss_pred C-----CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCC-CCchhcCHHHHHHH-HHhcCChhhCcCH
Confidence 5 567889999999999999999999998776555555444332221 12345688899999 5777899999999
Q ss_pred HHHhcCcCCC
Q psy9090 158 SELLEHPFIT 167 (488)
Q Consensus 158 ~ell~hp~f~ 167 (488)
+++++||||+
T Consensus 256 ~eil~hp~~~ 265 (266)
T cd06651 256 EELLRHPFAQ 265 (266)
T ss_pred HHHhcCcccc
Confidence 9999999985
No 207
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.94 E-value=5e-27 Score=229.67 Aligned_cols=162 Identities=25% Similarity=0.471 Sum_probs=130.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||+|||+++++||||+|+||+++.++.++|+|||++..............+++.|+|||++.+.
T Consensus 96 ~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~- 174 (283)
T cd07835 96 LDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGS- 174 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecC-
Confidence 4688999999999999999999999999999999999999999999999987554322222334568899999988642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC--------------------------CCCCCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP--------------------------PGLYRASN 134 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~ 134 (488)
..++.++|+||+|+++|+|++|.+||..........++.+... ........
T Consensus 175 ---~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (283)
T cd07835 175 ---RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPN 251 (283)
T ss_pred ---cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCC
Confidence 3468899999999999999999999987766554444332100 00001245
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
++..+.++|.+||+.+|.+|||+++++.||||
T Consensus 252 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 252 LDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 67889999999999999999999999999998
No 208
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=4.9e-27 Score=228.97 Aligned_cols=166 Identities=36% Similarity=0.770 Sum_probs=135.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..............|++.|+|||.+.++
T Consensus 98 l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 176 (277)
T cd06917 98 IAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEG- 176 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccC-
Confidence 5788999999999999999999999999999999999999999999999987665443334455788999999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...........+.....+. .....++.++.+++.+||..||++||++.++
T Consensus 177 ---~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~i 252 (277)
T cd06917 177 ---KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPR-LEDNGYSKLLREFVAACLDEEPKERLSAEEL 252 (277)
T ss_pred ---CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCC-CCcccCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 456889999999999999999999998766544333222222222 2223478899999999999999999999999
Q ss_pred hcCcCCCCCCC
Q psy9090 161 LEHPFITSLPE 171 (488)
Q Consensus 161 l~hp~f~~~~~ 171 (488)
+.||||+....
T Consensus 253 l~~~~~~~~~~ 263 (277)
T cd06917 253 LKSKWIKAHSK 263 (277)
T ss_pred hhChHhhcccc
Confidence 99999987543
No 209
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.94 E-value=7.8e-27 Score=231.28 Aligned_cols=168 Identities=28% Similarity=0.449 Sum_probs=136.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc---------------Ccccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---------------DKKKTFL 65 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---------------~~~~~~~ 65 (488)
+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||+++...... .......
T Consensus 98 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (305)
T cd05609 98 LPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVC 177 (305)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCc
Confidence 4788899999999999999999999999999999999999999999999876321000 0111245
Q ss_pred CCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHH
Q psy9090 66 GSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAE 145 (488)
Q Consensus 66 gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~ 145 (488)
+++.|+|||.+.. ..++.++|+|||||++|+|++|..||.+........+......+........+..+.++|.+
T Consensus 178 ~~~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 252 (305)
T cd05609 178 GTPEYIAPEVILR-----QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISR 252 (305)
T ss_pred cCccccCchhccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHH
Confidence 7889999999865 56789999999999999999999999887766666655544322222233578999999999
Q ss_pred hcccCCCCCCC---HHHHhcCcCCCCCCCCc
Q psy9090 146 CLEKNPEHRPY---MSELLEHPFITSLPEND 173 (488)
Q Consensus 146 ~L~~dP~~Rps---~~ell~hp~f~~~~~~~ 173 (488)
||..+|++||+ +.++++||||...++..
T Consensus 253 ~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~ 283 (305)
T cd05609 253 LLRQNPLERLGTGGAFEVKQHRFFLGLDWNG 283 (305)
T ss_pred HhccChhhccCccCHHHHHhCccccCCCHHH
Confidence 99999999997 79999999999887764
No 210
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94 E-value=7e-27 Score=225.53 Aligned_cols=159 Identities=31% Similarity=0.534 Sum_probs=134.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-----HCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchh
Q psy9090 1 MSEQHIAFILKEIITGMVFLH-----ENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEI 75 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH-----~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~ 75 (488)
+++..++.++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++..............+++.|+|||.
T Consensus 102 l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~ 181 (265)
T cd08217 102 IEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQ 181 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhh
Confidence 467889999999999999999 899999999999999999999999999999876544332345578999999999
Q ss_pred hcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 76 MRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 76 l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
+.. ..++.++|+||||+++|+|++|..||...........+.....+. .+..++..+.+++.+||..+|++||
T Consensus 182 ~~~-----~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~Rp 254 (265)
T cd08217 182 LNH-----MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR--IPYRYSSELNEVIKSMLNVDPDKRP 254 (265)
T ss_pred hcC-----CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCC--CccccCHHHHHHHHHHccCCcccCC
Confidence 876 457889999999999999999999998876544444444333222 3457789999999999999999999
Q ss_pred CHHHHhcCcCC
Q psy9090 156 YMSELLEHPFI 166 (488)
Q Consensus 156 s~~ell~hp~f 166 (488)
++.++++|||+
T Consensus 255 ~~~~il~~~~~ 265 (265)
T cd08217 255 STEELLQLPLI 265 (265)
T ss_pred CHHHHhhCCCC
Confidence 99999999995
No 211
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=3.7e-27 Score=228.57 Aligned_cols=163 Identities=43% Similarity=0.880 Sum_probs=129.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++..............|++.|+|||.+....
T Consensus 103 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 182 (267)
T cd06646 103 LSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEK 182 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHccccc
Confidence 46788999999999999999999999999999999999999999999999986643333334557889999999885321
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN--PPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
...++.++|+||+||++|+|++|..||....+......+... ..+.......++..+.++|++||..+|++|||++
T Consensus 183 --~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 260 (267)
T cd06646 183 --NGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAE 260 (267)
T ss_pred --CCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHH
Confidence 145778999999999999999999999765543332222111 1111122345789999999999999999999999
Q ss_pred HHhcCcC
Q psy9090 159 ELLEHPF 165 (488)
Q Consensus 159 ell~hp~ 165 (488)
++++|+|
T Consensus 261 ~il~~l~ 267 (267)
T cd06646 261 RLLTHLF 267 (267)
T ss_pred HHhcCCC
Confidence 9999987
No 212
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.94 E-value=3.4e-27 Score=228.33 Aligned_cols=161 Identities=39% Similarity=0.784 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.|++.||+|||+ .|++|+||||+||+++.++.++|+|||.+....... .....++..|+|||.+.+
T Consensus 97 ~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~y~~PE~~~~- 173 (265)
T cd06605 97 IPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL--AKTFVGTSSYMAPERIQG- 173 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH--hhcccCChhccCHHHHcC-
Confidence 4678899999999999999999 999999999999999999999999999987654321 122678899999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC-----hHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH-----PTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
..++.++|+||+|+++|+|++|..||.... .......+.....+.. ....++..++++|.+||..+|++|
T Consensus 174 ----~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R 248 (265)
T cd06605 174 ----NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRL-PSGKFSPDFQDFVNLCLIKDPRER 248 (265)
T ss_pred ----CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCC-ChhhcCHHHHHHHHHHcCCCchhC
Confidence 568899999999999999999999996542 2233333333333322 222378999999999999999999
Q ss_pred CCHHHHhcCcCCCCC
Q psy9090 155 PYMSELLEHPFITSL 169 (488)
Q Consensus 155 ps~~ell~hp~f~~~ 169 (488)
||+.+++.||||+..
T Consensus 249 pt~~~ll~~~~~~~~ 263 (265)
T cd06605 249 PSYKELLEHPFIKKY 263 (265)
T ss_pred cCHHHHhhCchhhcc
Confidence 999999999999764
No 213
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.94 E-value=4.6e-27 Score=235.39 Aligned_cols=168 Identities=29% Similarity=0.493 Sum_probs=135.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc---CccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---DKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~l~ 77 (488)
+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++....... .......+++.|+|||.+.
T Consensus 100 l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 179 (330)
T cd07834 100 LTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLL 179 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeee
Confidence 5788899999999999999999999999999999999999999999999988665432 1233456788999999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC---CCC-------------------------C
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP---PPG-------------------------L 129 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~---~~~-------------------------~ 129 (488)
+. ..++.++|+||+|+++|+|++|.+||.+.........+.... .+. .
T Consensus 180 ~~----~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (330)
T cd07834 180 SS----SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLS 255 (330)
T ss_pred cc----cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhH
Confidence 62 267889999999999999999999998877655444433211 000 0
Q ss_pred CCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 130 YRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 130 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
......++.+.++|.+||..+|.+|||+.+++.||||+++...
T Consensus 256 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 256 KLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred HhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0012357889999999999999999999999999999876543
No 214
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.94 E-value=6.2e-27 Score=229.59 Aligned_cols=166 Identities=41% Similarity=0.881 Sum_probs=139.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..............+++.|+|||.+.+
T Consensus 113 l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-- 190 (286)
T cd06614 113 MNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKR-- 190 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcC--
Confidence 467889999999999999999999999999999999999999999999988655433223334567889999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||||+++|+|++|..||....+......+.....+....+..++..++++|.+||..+|.+|||+.++
T Consensus 191 ---~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i 267 (286)
T cd06614 191 ---KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEEL 267 (286)
T ss_pred ---CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 56788999999999999999999999887766655555554444444444588999999999999999999999999
Q ss_pred hcCcCCCCCCC
Q psy9090 161 LEHPFITSLPE 171 (488)
Q Consensus 161 l~hp~f~~~~~ 171 (488)
++||||+..-+
T Consensus 268 l~~~~~~~~~~ 278 (286)
T cd06614 268 LQHPFLKKACP 278 (286)
T ss_pred hhChHhhccCc
Confidence 99999988543
No 215
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.94 E-value=6.5e-27 Score=230.37 Aligned_cols=166 Identities=27% Similarity=0.454 Sum_probs=131.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-CCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-DGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++..++.++.||+.||+|||++|++||||+|+||+++. ++.+||+|||++..............+++.|+|||.+.+.
T Consensus 100 ~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~- 178 (294)
T PLN00009 100 NPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGS- 178 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCC-
Confidence 56788899999999999999999999999999999985 5579999999987554332223344678899999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CCCCC-----------------C------CCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PPPGL-----------------Y------RASN 134 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~~~~-----------------~------~~~~ 134 (488)
..++.++|+||+||++|+|++|.+||..........++... +.... . ....
T Consensus 179 ---~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (294)
T PLN00009 179 ---RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPT 255 (294)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcC
Confidence 45788999999999999999999999877665555544321 10000 0 1234
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
.++.+++++.+||..+|++||++.++++||||.+++.
T Consensus 256 ~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 256 LEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred CChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 6788999999999999999999999999999987653
No 216
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.94 E-value=6.8e-27 Score=228.82 Aligned_cols=163 Identities=28% Similarity=0.479 Sum_probs=130.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++.+++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........ ......++..|+|||.+.+.
T Consensus 96 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 175 (286)
T cd07832 96 LPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA 175 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeecc
Confidence 47889999999999999999999999999999999999999999999999876543311 12345688999999998642
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCC---------------------C------CCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPG---------------------L------YRA 132 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~---------------------~------~~~ 132 (488)
..++.++||||+|+++|+|++|.+||.+.........+....... . ...
T Consensus 176 ----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (286)
T cd07832 176 ----RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIF 251 (286)
T ss_pred ----ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhC
Confidence 456889999999999999999999997766554444433211000 0 001
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFIT 167 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 167 (488)
...+..+.++|++||..+|.+|||++++++||||.
T Consensus 252 ~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 252 PDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 24568899999999999999999999999999984
No 217
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.94 E-value=6.8e-27 Score=230.43 Aligned_cols=165 Identities=36% Similarity=0.704 Sum_probs=136.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.+|+|||++|++||||+|+||+++.++.++|+|||++..............|++.|+|||.+.+
T Consensus 113 ~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-- 190 (292)
T cd06657 113 MNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR-- 190 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcC--
Confidence 467889999999999999999999999999999999999999999999988755433222334568899999998865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...........+....++........+..+.+++.+||..+|.+||++.++
T Consensus 191 ---~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~l 267 (292)
T cd06657 191 ---LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 267 (292)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHH
Confidence 45788999999999999999999999877655544444333333333345678999999999999999999999999
Q ss_pred hcCcCCCCCC
Q psy9090 161 LEHPFITSLP 170 (488)
Q Consensus 161 l~hp~f~~~~ 170 (488)
+.||||....
T Consensus 268 l~~~~~~~~~ 277 (292)
T cd06657 268 LKHPFLAKAG 277 (292)
T ss_pred hcChHHhccC
Confidence 9999998654
No 218
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.94 E-value=9.1e-27 Score=222.56 Aligned_cols=159 Identities=50% Similarity=1.035 Sum_probs=134.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.+|.+||++|++||||+|+||+++.++.++|+|||.+........ .....++..|+|||.+.+
T Consensus 95 ~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~-- 171 (253)
T cd05122 95 LTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVING-- 171 (253)
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-ccceecCCcccCHHHHcC--
Confidence 47888999999999999999999999999999999999999999999999876654321 345578899999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||.................+.......++..+.++|.+||..||++|||+.++
T Consensus 172 ---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~ 248 (253)
T cd05122 172 ---KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQL 248 (253)
T ss_pred ---CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence 44788999999999999999999999887655555555544444444444568999999999999999999999999
Q ss_pred hcCcC
Q psy9090 161 LEHPF 165 (488)
Q Consensus 161 l~hp~ 165 (488)
++|||
T Consensus 249 l~~~~ 253 (253)
T cd05122 249 LKHPF 253 (253)
T ss_pred hcCCC
Confidence 99998
No 219
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.94 E-value=7.1e-27 Score=235.00 Aligned_cols=167 Identities=30% Similarity=0.523 Sum_probs=132.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||+++++||||||+||+++.++.+||+|||++..............++..|+|||.+...
T Consensus 105 l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 183 (337)
T cd07858 105 LSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNC- 183 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcC-
Confidence 5788999999999999999999999999999999999999999999999987654332223345678899999988642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh---CCC------------------------CC-CCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR---NPP------------------------PG-LYRA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~---~~~------------------------~~-~~~~ 132 (488)
..++.++|+|||||++|+|++|++||.+.+.......+.. .+. +. ....
T Consensus 184 ---~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
T cd07858 184 ---SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLF 260 (337)
T ss_pred ---CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHc
Confidence 3478899999999999999999999977653322221110 000 00 0012
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
...++.++++|++||..+|++|||++++++||||..+..
T Consensus 261 ~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 261 PHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred ccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 356889999999999999999999999999999987643
No 220
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.94 E-value=5.9e-27 Score=231.04 Aligned_cols=156 Identities=19% Similarity=0.326 Sum_probs=123.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-------CccccccCCCccccch
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-------DKKKTFLGSPSWMAPE 74 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE 74 (488)
++..++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||+++...... .......||+.|+|||
T Consensus 124 ~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape 203 (294)
T PHA02882 124 NKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLD 203 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHH
Confidence 567788999999999999999999999999999999999999999999987653211 1122346999999999
Q ss_pred hhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHH-----HHHhCCCCCCCCCCCcCHHHHHHHHHhccc
Q psy9090 75 IMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALF-----QIVRNPPPGLYRASNWSQHYVDFIAECLEK 149 (488)
Q Consensus 75 ~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 149 (488)
++.+ ..++.++||||+||++|+|++|.+||.+........ ................++.+.++++.|+..
T Consensus 204 ~~~~-----~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (294)
T PHA02882 204 AHNG-----ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKL 278 (294)
T ss_pred HhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhC
Confidence 9876 668999999999999999999999997763221111 111111111122345688999999999999
Q ss_pred CCCCCCCHHHHhc
Q psy9090 150 NPEHRPYMSELLE 162 (488)
Q Consensus 150 dP~~Rps~~ell~ 162 (488)
+|++||++.++++
T Consensus 279 ~~~~rp~~~~l~~ 291 (294)
T PHA02882 279 SYEEKPDYDALIK 291 (294)
T ss_pred CCCCCCCHHHHHH
Confidence 9999999999875
No 221
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=8.6e-27 Score=229.16 Aligned_cols=162 Identities=23% Similarity=0.500 Sum_probs=124.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++.............+++.|+|||.+.+.
T Consensus 100 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 178 (291)
T cd07870 100 LHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGA- 178 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecC-
Confidence 3577889999999999999999999999999999999999999999999987543322223344678999999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH-HHHHHHHh---CCC--------------CCC------------C
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT-RALFQIVR---NPP--------------PGL------------Y 130 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~-~~~~~~~~---~~~--------------~~~------------~ 130 (488)
..++.++|+|||||++|+|++|..||...... +.+.++.. .+. +.. .
T Consensus 179 ---~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (291)
T cd07870 179 ---TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVW 255 (291)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhc
Confidence 34778999999999999999999999765432 22222111 000 000 0
Q ss_pred CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 131 RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 131 ~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.....+..+.+++.+||..||.+|||+.+++.||||
T Consensus 256 ~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 256 KRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 001125688999999999999999999999999997
No 222
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.94 E-value=4.2e-27 Score=231.97 Aligned_cols=165 Identities=41% Similarity=0.782 Sum_probs=135.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++..............+++.|+|||.+..
T Consensus 112 l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-- 189 (293)
T cd06647 112 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-- 189 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhcc--
Confidence 467888999999999999999999999999999999999999999999988755433233334568889999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|++++|..||...........+.....+....+...+..++++|.+||..+|++||++.++
T Consensus 190 ---~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~i 266 (293)
T cd06647 190 ---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 266 (293)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 55788999999999999999999999876654443333333333333445568889999999999999999999999
Q ss_pred hcCcCCCCCC
Q psy9090 161 LEHPFITSLP 170 (488)
Q Consensus 161 l~hp~f~~~~ 170 (488)
+.||||+...
T Consensus 267 l~h~~~~~~~ 276 (293)
T cd06647 267 LQHPFLKIAK 276 (293)
T ss_pred hcCHHHhcCc
Confidence 9999998654
No 223
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.94 E-value=8.2e-27 Score=228.15 Aligned_cols=156 Identities=24% Similarity=0.438 Sum_probs=129.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++....... .......+++.|+|||.+.+
T Consensus 121 l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 200 (283)
T cd05048 121 LDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY 200 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc
Confidence 4567889999999999999999999999999999999999999999999987543221 12233456788999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |..||.+....+....+.....+. .+..+++++.+|+.+||+.+|.+||++
T Consensus 201 -----~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~l~~~c~~~~p~~Rp~~ 273 (283)
T cd05048 201 -----GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLP--CPEDCPARVYALMIECWNEIPARRPRF 273 (283)
T ss_pred -----CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC--CcccCCHHHHHHHHHHccCChhhCcCH
Confidence 568899999999999999998 999998887766655555443332 356789999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++++
T Consensus 274 ~~i~~~ 279 (283)
T cd05048 274 KDIHTR 279 (283)
T ss_pred HHHHHH
Confidence 999874
No 224
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.94 E-value=6.5e-27 Score=235.82 Aligned_cols=164 Identities=29% Similarity=0.538 Sum_probs=132.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||+++.... ......+++.|+|||.+.+.
T Consensus 114 ~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~- 189 (342)
T cd07879 114 LSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA---EMTGYVVTRWYRAPEVILNW- 189 (342)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC---CCCCceeeecccChhhhcCc-
Confidence 46888999999999999999999999999999999999999999999999875432 22344678899999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC----------------------CCCCC------C
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP----------------------PGLYR------A 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~----------------------~~~~~------~ 132 (488)
..++.++|+|||||++|+|++|+.||.+.........+..... +.... .
T Consensus 190 ---~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (342)
T cd07879 190 ---MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLF 266 (342)
T ss_pred ---cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHh
Confidence 3478899999999999999999999987765444433322100 00000 1
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
+..++.+.+||.+||..||++||++.+++.||||+.+..
T Consensus 267 ~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 267 PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 245778999999999999999999999999999998754
No 225
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.94 E-value=9.6e-27 Score=225.93 Aligned_cols=160 Identities=38% Similarity=0.751 Sum_probs=126.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-CCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-DGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++..+..++.||+.||+|||++||+||||||+||+++. ++.++|+|||++..............|++.|+|||.+...
T Consensus 106 ~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~- 184 (268)
T cd06624 106 NEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKG- 184 (268)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccc-
Confidence 56778899999999999999999999999999999976 6789999999987554322223344688999999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHH-HHHH-HhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRA-LFQI-VRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~-~~~~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
...++.++|+||+|+++|+|++|.+||........ .... .....+ ..+...++++++++.+||..+|.+|||+.
T Consensus 185 --~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 260 (268)
T cd06624 185 --PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP--EIPESLSAEAKNFILRCFEPDPDKRASAH 260 (268)
T ss_pred --cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCC--CCCcccCHHHHHHHHHHcCCCchhCCCHH
Confidence 13477899999999999999999999975433221 1111 111111 12456789999999999999999999999
Q ss_pred HHhcCcCC
Q psy9090 159 ELLEHPFI 166 (488)
Q Consensus 159 ell~hp~f 166 (488)
+++.||||
T Consensus 261 ~ll~~~~~ 268 (268)
T cd06624 261 DLLQDPFL 268 (268)
T ss_pred HHHhCCCC
Confidence 99999997
No 226
>KOG0665|consensus
Probab=99.94 E-value=4e-27 Score=221.06 Aligned_cols=160 Identities=29% Similarity=0.507 Sum_probs=132.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHK 81 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~ 81 (488)
..+.+++++.|++.|++|||+.||+||||||+||++..+..+|+.|||+++..... -..+..+.|..|.|||++.+
T Consensus 116 DH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~-~~mtpyVvtRyyrapevil~--- 191 (369)
T KOG0665|consen 116 DHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD-FMMTPYVVTRYYRAPEVILG--- 191 (369)
T ss_pred chHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-cccCchhheeeccCchheec---
Confidence 46788999999999999999999999999999999999999999999999865543 34566788999999999987
Q ss_pred CCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC---C------------------CC--------CCCC
Q psy9090 82 EVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP---P------------------PG--------LYRA 132 (488)
Q Consensus 82 ~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~---~------------------~~--------~~~~ 132 (488)
..|.+.+||||+||++.||++|...|.+.....++.++.... . +. ..+.
T Consensus 192 --~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD 269 (369)
T KOG0665|consen 192 --MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPD 269 (369)
T ss_pred --cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCc
Confidence 558999999999999999999999999877666666554310 0 00 0000
Q ss_pred C----------CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCC
Q psy9090 133 S----------NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFIT 167 (488)
Q Consensus 133 ~----------~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 167 (488)
. .-+..+++|+.+||..||++|.|++++|+|||++
T Consensus 270 ~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 270 SLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred ccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0 1134578999999999999999999999999998
No 227
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.94 E-value=1.3e-26 Score=230.49 Aligned_cols=167 Identities=33% Similarity=0.659 Sum_probs=129.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-------ccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-------KKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aP 73 (488)
+++..++.++.||+.||+|||+++|+||||||+||+++.++.+||+|||.+........ ......++..|+||
T Consensus 98 ~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 177 (314)
T cd08216 98 LPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSP 177 (314)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCH
Confidence 46788999999999999999999999999999999999999999999998765432111 12234567789999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCC-------------------------
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPG------------------------- 128 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~------------------------- 128 (488)
|++... ...++.++|+||+||++|+|++|..||.................+.
T Consensus 178 E~~~~~---~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
T cd08216 178 EVLQQN---LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPN 254 (314)
T ss_pred HHhcCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccc
Confidence 998652 1357889999999999999999999998765544333322211100
Q ss_pred ------CCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 129 ------LYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 129 ------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
......++.++.+|+.+||..||++|||++++++||||+.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 255 NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 000112346788999999999999999999999999998764
No 228
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.94 E-value=1.5e-26 Score=222.76 Aligned_cols=159 Identities=29% Similarity=0.597 Sum_probs=135.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++..............+++.|+|||.+.+
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~-- 175 (256)
T cd08221 98 FEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQG-- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCC--
Confidence 467889999999999999999999999999999999999999999999998765443323345678999999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...........+.....+. .+...+..+.++|.+||..+|.+||++.++
T Consensus 176 ---~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~s~~~l 250 (256)
T cd08221 176 ---VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP--VVSVYSSELISLVHSLLQQDPEKRPTADEV 250 (256)
T ss_pred ---CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--CccccCHHHHHHHHHHcccCcccCCCHHHH
Confidence 457789999999999999999999998877766666665543332 235678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++|||+
T Consensus 251 l~~~~l 256 (256)
T cd08221 251 LDQPLL 256 (256)
T ss_pred hhCcCC
Confidence 999986
No 229
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.94 E-value=1.7e-26 Score=229.12 Aligned_cols=161 Identities=40% Similarity=0.815 Sum_probs=135.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++..... .....+++.|+|||++.+..
T Consensus 112 l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 187 (307)
T cd06607 112 LQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP----ANSFVGTPYWMAPEVILAMD 187 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC----CCCccCCccccCceeeeccC
Confidence 47888999999999999999999999999999999999999999999998865432 23456888999999885321
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
...++.++||||+|+++|+|++|.+||...........+.....+.. .+..++..++++|.+||..+|++||++.++
T Consensus 188 --~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 264 (307)
T cd06607 188 --EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL-SSNDWSDYFRNFVDSCLQKIPQDRPSSEEL 264 (307)
T ss_pred --CCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCC-CchhhCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 14578899999999999999999999988776665555544433332 344688999999999999999999999999
Q ss_pred hcCcCCCC
Q psy9090 161 LEHPFITS 168 (488)
Q Consensus 161 l~hp~f~~ 168 (488)
+.||||..
T Consensus 265 l~~~~~~~ 272 (307)
T cd06607 265 LKHRFVLR 272 (307)
T ss_pred hcChhhcc
Confidence 99999975
No 230
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.94 E-value=4.8e-27 Score=229.25 Aligned_cols=163 Identities=46% Similarity=0.904 Sum_probs=134.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+
T Consensus 98 ~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-- 175 (277)
T cd06642 98 LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ-- 175 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCc--
Confidence 467889999999999999999999999999999999999999999999998765443222334568889999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+||++|+|++|..||....+......+.....+. .....+..+.++|.+||..+|.+||++.++
T Consensus 176 ---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 250 (277)
T cd06642 176 ---SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPT--LEGQYSKPFKEFVEACLNKDPRFRPTAKEL 250 (277)
T ss_pred ---CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCC--CCcccCHHHHHHHHHHccCCcccCcCHHHH
Confidence 567889999999999999999999998766544444333332222 234568899999999999999999999999
Q ss_pred hcCcCCCCCC
Q psy9090 161 LEHPFITSLP 170 (488)
Q Consensus 161 l~hp~f~~~~ 170 (488)
+.||||....
T Consensus 251 l~~~~~~~~~ 260 (277)
T cd06642 251 LKHKFITRYT 260 (277)
T ss_pred HHhHHHHHHh
Confidence 9999997644
No 231
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1.6e-26 Score=226.53 Aligned_cols=167 Identities=35% Similarity=0.669 Sum_probs=133.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||.|||+ +|++||||||+||+++.++.++|+|||++...... ......+++.|+|||.+.+.
T Consensus 99 ~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~ 176 (286)
T cd06622 99 IPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--LAKTNIGCQSYMAPERIKSG 176 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--ccccCCCccCccCcchhcCC
Confidence 5788999999999999999997 59999999999999999999999999998765332 23345688899999998653
Q ss_pred cc-CCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHH---HHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 80 HK-EVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQ---IVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 80 ~~-~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
.. ....++.++|+||+||++|+|++|..||........... +.....+. .+..+++++.++|.+||..+|++||
T Consensus 177 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp 254 (286)
T cd06622 177 GPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPT--LPSGYSDDAQDFVAKCLNKIPNRRP 254 (286)
T ss_pred CCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCC--CCcccCHHHHHHHHHHcccCcccCC
Confidence 21 123468899999999999999999999976544332222 22222222 3455899999999999999999999
Q ss_pred CHHHHhcCcCCCCCCC
Q psy9090 156 YMSELLEHPFITSLPE 171 (488)
Q Consensus 156 s~~ell~hp~f~~~~~ 171 (488)
++.++++||||.....
T Consensus 255 ~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 255 TYAQLLEHPWLVKYKN 270 (286)
T ss_pred CHHHHhcChhhhhccC
Confidence 9999999999987543
No 232
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=1.1e-26 Score=228.28 Aligned_cols=162 Identities=25% Similarity=0.524 Sum_probs=124.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||+++.............+++.|+|||++.+.
T Consensus 100 ~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~- 178 (291)
T cd07844 100 LSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGS- 178 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcC-
Confidence 4678899999999999999999999999999999999999999999999986543222222233568899999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC-hHHHHHHHHh---CCCCCC------------------------CCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMH-PTRALFQIVR---NPPPGL------------------------YRA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~-~~~~~~~~~~---~~~~~~------------------------~~~ 132 (488)
..++.++|+||+|+++|+|++|..||.+.. .......+.. .+.+.. ...
T Consensus 179 ---~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (291)
T cd07844 179 ---TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHA 255 (291)
T ss_pred ---cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhC
Confidence 457889999999999999999999997655 2222221111 000000 000
Q ss_pred CCcC--HHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 133 SNWS--QHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 133 ~~~s--~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
..++ ..+.+++.+||..+|.+|||+.++++||||
T Consensus 256 ~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 256 PRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 1233 788899999999999999999999999998
No 233
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.94 E-value=9.6e-27 Score=224.76 Aligned_cols=163 Identities=40% Similarity=0.779 Sum_probs=135.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||+ .|++||||+|+||+++.++.++|+|||++..............++..|+|||.+..
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~- 174 (264)
T cd06623 96 IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQG- 174 (264)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCC-
Confidence 5788999999999999999999 99999999999999999999999999998766544333335568899999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC---hHHHHHHHHhCCCCCCCCCCC-cCHHHHHHHHHhcccCCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH---PTRALFQIVRNPPPGLYRASN-WSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~---~~~~~~~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~Rp 155 (488)
..++.++|+||||+++|+|++|..||.... .......+.....+. .+.. ++..+.++|.+||..+|++||
T Consensus 175 ----~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~R~ 248 (264)
T cd06623 175 ----ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS--LPAEEFSPEFRDFISACLQKDPKKRP 248 (264)
T ss_pred ----CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC--CCcccCCHHHHHHHHHHccCChhhCC
Confidence 467889999999999999999999997763 333344444333322 2334 789999999999999999999
Q ss_pred CHHHHhcCcCCCCCC
Q psy9090 156 YMSELLEHPFITSLP 170 (488)
Q Consensus 156 s~~ell~hp~f~~~~ 170 (488)
|+.++++|||++..+
T Consensus 249 ~~~~ll~~~~~~~~~ 263 (264)
T cd06623 249 SAAELLQHPFIKKAD 263 (264)
T ss_pred CHHHHHhCHHHHhcc
Confidence 999999999998653
No 234
>KOG0584|consensus
Probab=99.94 E-value=2.8e-27 Score=239.71 Aligned_cols=160 Identities=28% Similarity=0.538 Sum_probs=135.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCCEEEcc-CCcEEEEecCCccccccccCccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENH--VIHRDLRGSNVLLTK-DGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~ 77 (488)
++.+.++.|++||+.||.|||++. |+|||||.+||+|+. .|.|||+|+|+|+..... .....+|||.|||||+..
T Consensus 140 vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--~aksvIGTPEFMAPEmYE 217 (632)
T KOG0584|consen 140 VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--HAKSVIGTPEFMAPEMYE 217 (632)
T ss_pred CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc--ccceeccCccccChHHHh
Confidence 356789999999999999999997 999999999999974 689999999999876653 334579999999999986
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..|+..+||||||+++.||+|+..||........+++.+.....+.....--.+++++||.+||.. .+.|||+
T Consensus 218 ------E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa 290 (632)
T KOG0584|consen 218 ------ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSA 290 (632)
T ss_pred ------hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCH
Confidence 579999999999999999999999998887777776666543333222233378999999999999 9999999
Q ss_pred HHHhcCcCCCCC
Q psy9090 158 SELLEHPFITSL 169 (488)
Q Consensus 158 ~ell~hp~f~~~ 169 (488)
.++|.||||..-
T Consensus 291 ~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 291 KELLKDPFFDED 302 (632)
T ss_pred HHHhhChhhccc
Confidence 999999999864
No 235
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.94 E-value=1.1e-26 Score=230.06 Aligned_cols=162 Identities=27% Similarity=0.522 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-----------ccccccCCCc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-----------KKKTFLGSPS 69 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-----------~~~~~~gt~~ 69 (488)
+++..++.++.||++||+|||++|++||||||+||+++.++.++|+|||++........ ......+++.
T Consensus 112 ~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (311)
T cd07866 112 LTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRW 191 (311)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccC
Confidence 57889999999999999999999999999999999999999999999999875432211 1123356888
Q ss_pred cccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CCCCC----------C------
Q psy9090 70 WMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PPPGL----------Y------ 130 (488)
Q Consensus 70 y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~~~~----------~------ 130 (488)
|+|||.+.+. ..++.++|+||+||++|+|++|++||.+.........+... +.+.. .
T Consensus 192 y~aPE~~~~~----~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (311)
T cd07866 192 YRPPELLLGE----RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFT 267 (311)
T ss_pred cCChHHhhCC----CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCC
Confidence 9999988642 45788999999999999999999999877665444433321 00000 0
Q ss_pred --------CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 131 --------RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 131 --------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
....+++.+.++|.+||..+|.+|||+.+++.||||
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 268 NYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred CCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 012345678899999999999999999999999998
No 236
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.94 E-value=1.4e-26 Score=228.36 Aligned_cols=168 Identities=35% Similarity=0.647 Sum_probs=133.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||+ .||+||||+|+||+++.++.+||+|||++...... .......+++.|+|||.+.+.
T Consensus 111 l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~ 189 (296)
T cd06618 111 IPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS-KAKTRSAGCAAYMAPERIDPP 189 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC-CcccCCCCCccccCHhhcCCC
Confidence 4678889999999999999997 69999999999999999999999999998765432 122234578899999998652
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP-TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
.. ...++.++|+||||+++|+|++|+.||..... .+.+.++.....+.......++.++.+|+.+||..+|.+||+++
T Consensus 190 ~~-~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~ 268 (296)
T cd06618 190 DP-NPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYR 268 (296)
T ss_pred CC-ccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 11 13478899999999999999999999976433 23334444443333333345789999999999999999999999
Q ss_pred HHhcCcCCCCCC
Q psy9090 159 ELLEHPFITSLP 170 (488)
Q Consensus 159 ell~hp~f~~~~ 170 (488)
+++.||||....
T Consensus 269 ~il~~~~~~~~~ 280 (296)
T cd06618 269 ELLQHPFIRRYE 280 (296)
T ss_pred HHhcChhhhccc
Confidence 999999998643
No 237
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.94 E-value=1.8e-26 Score=222.03 Aligned_cols=158 Identities=28% Similarity=0.543 Sum_probs=132.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-cEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-EVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.|++.+|+|||++|++|+||+|+||+++.++ .++|+|||++...... .......+++.|+|||.+.+
T Consensus 98 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~- 175 (256)
T cd08220 98 LDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK-SKAYTVVGTPCYISPELCEG- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC-ccccccccCCcccCchhccC-
Confidence 46788999999999999999999999999999999998654 5899999998765443 22334568899999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+||+|+++|+|++|..||...........+....... .+..+++.+.+++.+||..+|.+|||+.+
T Consensus 176 ----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 249 (256)
T cd08220 176 ----KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP--ISDRYSPDLRQLILSMLNLDPSKRPQLSQ 249 (256)
T ss_pred ----CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC--CCCCcCHHHHHHHHHHccCChhhCCCHHH
Confidence 557889999999999999999999998877666555555443332 34567999999999999999999999999
Q ss_pred HhcCcCC
Q psy9090 160 LLEHPFI 166 (488)
Q Consensus 160 ll~hp~f 166 (488)
+++||||
T Consensus 250 ll~~p~~ 256 (256)
T cd08220 250 IMAQPIC 256 (256)
T ss_pred HhhCCCC
Confidence 9999996
No 238
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.94 E-value=1.5e-26 Score=226.54 Aligned_cols=162 Identities=30% Similarity=0.586 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++..............++..|+|||++.+.
T Consensus 97 ~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~- 175 (286)
T cd07846 97 LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD- 175 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccc-
Confidence 4678999999999999999999999999999999999999999999999987654432333345678899999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC---------------------CCCC-------CCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP---------------------PPGL-------YRA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~---------------------~~~~-------~~~ 132 (488)
..++.++|+||+|+++|+|++|.+||...........+.... .+.. ...
T Consensus 176 ---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (286)
T cd07846 176 ---TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRF 252 (286)
T ss_pred ---cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhC
Confidence 346789999999999999999999997665443333322100 0000 012
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
..++..+.+|+.+||..+|++||++.++++||||
T Consensus 253 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 253 PKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred CCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 3568889999999999999999999999999998
No 239
>KOG0662|consensus
Probab=99.94 E-value=9.2e-27 Score=201.81 Aligned_cols=165 Identities=25% Similarity=0.491 Sum_probs=137.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|..+.++.++.|++.||.+||++++.|||+||.|.||+.+|.+||+|||+++-++-+....+..+-|.+|.+|.++.+.
T Consensus 98 ~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfga- 176 (292)
T KOG0662|consen 98 LDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA- 176 (292)
T ss_pred CCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeee-
Confidence 4577899999999999999999999999999999999999999999999999877665555666789999999999874
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhC---C----CCCC------------CCCC-------
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRN---P----PPGL------------YRAS------- 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~---~----~~~~------------~~~~------- 133 (488)
.-|+.+.|+||.||++.|+.. |++.|.+.+...++.++.+. + .|.. +...
T Consensus 177 ---kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp 253 (292)
T KOG0662|consen 177 ---KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVP 253 (292)
T ss_pred ---ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhh
Confidence 669999999999999999975 88889998877777776541 1 1111 1111
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
.++..-++|++++|.-+|.+|++++.+++||||.+.
T Consensus 254 ~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 254 KLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 123445899999999999999999999999999865
No 240
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94 E-value=1.4e-26 Score=229.24 Aligned_cols=162 Identities=25% Similarity=0.476 Sum_probs=126.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC----ccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD----KKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~l 76 (488)
+++.+++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||++........ ......++..|+|||.+
T Consensus 116 ~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 195 (310)
T cd07865 116 FTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELL 195 (310)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHh
Confidence 47889999999999999999999999999999999999999999999999876533211 11234577889999988
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh---CCCCCCC-----------------------
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR---NPPPGLY----------------------- 130 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~---~~~~~~~----------------------- 130 (488)
.+. ..++.++|+||+|+++|+|++|.+||.+.........+.. ..++...
T Consensus 196 ~~~----~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (310)
T cd07865 196 LGE----RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVK 271 (310)
T ss_pred cCC----cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhH
Confidence 652 3467899999999999999999999987665433322211 1110000
Q ss_pred ---CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 131 ---RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 131 ---~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.+...+..++++|.+||..||.+|||++++++||||
T Consensus 272 ~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 272 ERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 011125677899999999999999999999999998
No 241
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.94 E-value=1.9e-26 Score=221.34 Aligned_cols=159 Identities=31% Similarity=0.624 Sum_probs=136.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..............|++.|+|||.+..
T Consensus 100 ~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-- 177 (258)
T cd08215 100 FPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQN-- 177 (258)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhcc--
Confidence 467889999999999999999999999999999999999999999999998766544333445578899999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++++|++|..||.................+. .+..++..+.+++.+||..+|++|||+.++
T Consensus 178 ---~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l 252 (258)
T cd08215 178 ---KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPP--IPSQYSSELRNLVSSLLQKDPEERPSIAQI 252 (258)
T ss_pred ---CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 557889999999999999999999998877666665555544333 244678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++||||
T Consensus 253 l~~~~~ 258 (258)
T cd08215 253 LQSPFI 258 (258)
T ss_pred hcCCCC
Confidence 999997
No 242
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=1e-26 Score=227.13 Aligned_cols=164 Identities=46% Similarity=0.896 Sum_probs=135.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++..............++..|+|||++.+
T Consensus 98 l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~-- 175 (277)
T cd06640 98 FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ-- 175 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhcc--
Confidence 467888999999999999999999999999999999999999999999998765443223334567889999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+|||||++|+|++|.+||....+......+.....+. .+...+..+.+++.+||..+|++||++.++
T Consensus 176 ---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 250 (277)
T cd06640 176 ---SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPT--LTGEFSKPFKEFIDACLNKDPSFRPTAKEL 250 (277)
T ss_pred ---CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCC--CchhhhHHHHHHHHHHcccCcccCcCHHHH
Confidence 567889999999999999999999998777655444433332222 234567889999999999999999999999
Q ss_pred hcCcCCCCCCC
Q psy9090 161 LEHPFITSLPE 171 (488)
Q Consensus 161 l~hp~f~~~~~ 171 (488)
+.||||.....
T Consensus 251 l~~~~~~~~~~ 261 (277)
T cd06640 251 LKHKFIVKNAK 261 (277)
T ss_pred HhChHhhhcch
Confidence 99999976544
No 243
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=1.6e-26 Score=225.68 Aligned_cols=162 Identities=28% Similarity=0.535 Sum_probs=130.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||.+..............++..|+|||.+.+.
T Consensus 95 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~- 173 (283)
T cd05118 95 LPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD- 173 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcC-
Confidence 4678899999999999999999999999999999999999999999999987665432222334678899999998752
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC---CC------------------------CCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP---PG------------------------LYRAS 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~---~~------------------------~~~~~ 133 (488)
..++.++|+||+|+++|+|++|+.||...+.......+..... +. .....
T Consensus 174 ---~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (283)
T cd05118 174 ---KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFP 250 (283)
T ss_pred ---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhh
Confidence 3678899999999999999999999987776554444332100 00 00112
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
..+.+++++|.+||..||.+||++.+++.||||
T Consensus 251 ~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 251 NASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 357889999999999999999999999999997
No 244
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.94 E-value=1.6e-26 Score=232.10 Aligned_cols=168 Identities=27% Similarity=0.516 Sum_probs=132.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC----ccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD----KKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~l 76 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++........ ......|+..|+|||.+
T Consensus 104 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~ 183 (334)
T cd07855 104 LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELL 183 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHh
Confidence 57889999999999999999999999999999999999999999999999876533211 11244788999999998
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh---CC-------------------CCC-CC---
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR---NP-------------------PPG-LY--- 130 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~---~~-------------------~~~-~~--- 130 (488)
.+. ..++.++|+||+||++|+|++|++||.+......+..+.. .+ .+. ..
T Consensus 184 ~~~----~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (334)
T cd07855 184 LSL----PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPW 259 (334)
T ss_pred cCC----cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCH
Confidence 642 3578899999999999999999999977654333222111 00 000 00
Q ss_pred --CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 131 --RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 131 --~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
.....++.++++|++||+.+|.+|||+.+++.||||.+.+..
T Consensus 260 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 260 SKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 013458899999999999999999999999999999876543
No 245
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.94 E-value=2.1e-26 Score=225.37 Aligned_cols=160 Identities=28% Similarity=0.475 Sum_probs=130.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++...... .......+++.|+|||++.+
T Consensus 104 l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~~PE~~~~-- 180 (287)
T cd07838 104 LPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE-MALTSVVVTLWYRAPEVLLQ-- 180 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC-cccccccccccccChHHhcc--
Confidence 578899999999999999999999999999999999999999999999998765432 22233457889999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCC------------------CCC------CCCCcC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPP------------------GLY------RASNWS 136 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~------------------~~~------~~~~~s 136 (488)
..++.++|+||+||++|+|++|.+||.+....+...++...... ... .....+
T Consensus 181 ---~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (287)
T cd07838 181 ---SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEIC 257 (287)
T ss_pred ---CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhh
Confidence 56788999999999999999999999887766555544431100 000 011345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 137 QHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 137 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
+.+.++|.+||..||.+||++.+++.||||
T Consensus 258 ~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 258 EEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred HHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 778899999999999999999999999997
No 246
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=1.6e-26 Score=232.99 Aligned_cols=163 Identities=30% Similarity=0.536 Sum_probs=132.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++...... .....+++.|+|||.+.+.
T Consensus 115 l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~- 190 (343)
T cd07851 115 LSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW- 190 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc---ccCCcccccccCHHHHhCC-
Confidence 578899999999999999999999999999999999999999999999998765432 3344678899999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCC----------------------CC------CCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPP----------------------GL------YRA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~----------------------~~------~~~ 132 (488)
..++.++|+|||||++|+|++|+.||.+.........+...... .. ...
T Consensus 191 ---~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T cd07851 191 ---MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVF 267 (343)
T ss_pred ---CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHh
Confidence 35778999999999999999999999877665444443321100 00 001
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
...++.+.++|.+||..+|++|||+.++++||||....
T Consensus 268 ~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 268 SGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred ccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccC
Confidence 23588999999999999999999999999999998753
No 247
>KOG4721|consensus
Probab=99.94 E-value=2e-27 Score=236.94 Aligned_cols=156 Identities=29% Similarity=0.601 Sum_probs=134.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHK 81 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~ 81 (488)
+......|..+|+.|++|||.+.|||||||.-||||..+..|||+|||.++..... ...-.++||..|||||+++.
T Consensus 210 tp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMSFaGTVaWMAPEvIrn--- 285 (904)
T KOG4721|consen 210 TPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMSFAGTVAWMAPEVIRN--- 285 (904)
T ss_pred CHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhhhhhhHhhhCHHHhhc---
Confidence 45667789999999999999999999999999999999999999999999877654 44557899999999999987
Q ss_pred CCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHh
Q psy9090 82 EVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSELL 161 (488)
Q Consensus 82 ~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell 161 (488)
.+.++|+|||||||+||||+||..||.+.....++..+= ...-.++.|..+++.++=||+.||+-.|..|||+.+++
T Consensus 286 --ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG-sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil 362 (904)
T KOG4721|consen 286 --EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG-SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQIL 362 (904)
T ss_pred --CCcccccceehhHHHHHHHHhcCCCccccchheeEEecc-CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHH
Confidence 789999999999999999999999998876554433322 22234456778899999999999999999999999999
Q ss_pred cCc
Q psy9090 162 EHP 164 (488)
Q Consensus 162 ~hp 164 (488)
.|-
T Consensus 363 ~Hl 365 (904)
T KOG4721|consen 363 LHL 365 (904)
T ss_pred HHH
Confidence 884
No 248
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.94 E-value=1.2e-26 Score=253.66 Aligned_cols=164 Identities=27% Similarity=0.488 Sum_probs=131.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHC-------CCeecccCCCCEEEcc-----------------CCcEEEEecCCcccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHEN-------HVIHRDLRGSNVLLTK-----------------DGEVKIVDFGLSRETAN 56 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~-------givHrDlkp~NILl~~-----------------~~~vkL~Dfg~a~~~~~ 56 (488)
|++..++.|+.||+.||.|||+. +||||||||+|||++. .+.+||+|||++.....
T Consensus 115 L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~ 194 (1021)
T PTZ00266 115 IEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI 194 (1021)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccc
Confidence 57889999999999999999985 4999999999999964 23489999999976543
Q ss_pred ccCccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcC
Q psy9090 57 TFDKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWS 136 (488)
Q Consensus 57 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s 136 (488)
. .......||+.|+|||++.+. ...++.++|||||||++|+|++|..||........+...+...+ .. .....+
T Consensus 195 ~-s~~~s~vGTp~YmAPEvL~ge---~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p-~l-pi~~~S 268 (1021)
T PTZ00266 195 E-SMAHSCVGTPYYWSPELLLHE---TKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGP-DL-PIKGKS 268 (1021)
T ss_pred c-ccccccCCCccccCHHHHhcc---CCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCC-CC-CcCCCC
Confidence 2 223455799999999998642 14578899999999999999999999976655444444443321 11 224568
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 137 QHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 137 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
.++.+||..||..+|.+||++.++|.|||++.+.
T Consensus 269 ~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 269 KELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred HHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 9999999999999999999999999999998654
No 249
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94 E-value=3.2e-26 Score=221.23 Aligned_cols=164 Identities=30% Similarity=0.672 Sum_probs=130.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc----ccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK----KTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~----~~~~gt~~y~aPE~l 76 (488)
+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++.......... ....+++.|+|||.+
T Consensus 96 ~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~ 175 (264)
T cd06626 96 LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVI 175 (264)
T ss_pred CChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhc
Confidence 4678899999999999999999999999999999999999999999999987654332211 134678899999998
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP-TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
.+.. ...++.++|+||+|+++|++++|..||..... ......+.....+..+.....++.+.++|.+||..+|.+||
T Consensus 176 ~~~~--~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~ 253 (264)
T cd06626 176 TGGK--GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRP 253 (264)
T ss_pred cCCC--CCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCC
Confidence 7631 12378899999999999999999999976533 23333333333333333334589999999999999999999
Q ss_pred CHHHHhcCcCC
Q psy9090 156 YMSELLEHPFI 166 (488)
Q Consensus 156 s~~ell~hp~f 166 (488)
|+.+++.|||+
T Consensus 254 ~~~~i~~~~~~ 264 (264)
T cd06626 254 TASELLQHPFV 264 (264)
T ss_pred CHHHHhcCCCC
Confidence 99999999996
No 250
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.94 E-value=1.2e-26 Score=230.63 Aligned_cols=162 Identities=29% Similarity=0.454 Sum_probs=125.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc----CCcEEEEecCCccccccccC---ccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK----DGEVKIVDFGLSRETANTFD---KKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~----~~~vkL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aP 73 (488)
+++..++.++.||+.||+|||+++|+||||||+||+++. ++.+||+|||++........ ......+++.|+||
T Consensus 105 ~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 184 (316)
T cd07842 105 IPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAP 184 (316)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCH
Confidence 478899999999999999999999999999999999999 89999999999876543211 22344678899999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHH---------HHHHHHh---CCC---------------
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTR---------ALFQIVR---NPP--------------- 126 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~---------~~~~~~~---~~~--------------- 126 (488)
|++.+. ..++.++|+|||||++|+|++|.+||.+..... .+..++. .+.
T Consensus 185 E~~~~~----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (316)
T cd07842 185 ELLLGA----RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDT 260 (316)
T ss_pred HHHhCC----CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchh
Confidence 988652 457889999999999999999999997554321 1111100 000
Q ss_pred ----CCCCCC------------CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 127 ----PGLYRA------------SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 127 ----~~~~~~------------~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
...... ...+..+.+++.+||..||++|||+.++++||||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 261 LMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000000 1456789999999999999999999999999998
No 251
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.94 E-value=1.7e-26 Score=225.83 Aligned_cols=162 Identities=28% Similarity=0.513 Sum_probs=129.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++..............+++.|+|||++.+.
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~- 175 (284)
T cd07836 97 LDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGS- 175 (284)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCC-
Confidence 4788999999999999999999999999999999999999999999999987554332223344678899999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CCC--------------CCC---------CCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PPP--------------GLY---------RASN 134 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~~--------------~~~---------~~~~ 134 (488)
..++.++|+||+||++|+|++|++||.+....+...++... +.. ..+ ....
T Consensus 176 ---~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd07836 176 ---RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPH 252 (284)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhh
Confidence 35678999999999999999999999877655444433221 000 000 0123
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.++.++++|.+||+.+|.+||++.++++||||
T Consensus 253 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 253 ADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 47788999999999999999999999999998
No 252
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.94 E-value=2.9e-26 Score=231.08 Aligned_cols=165 Identities=28% Similarity=0.486 Sum_probs=129.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-CCcEEEEecCCccccccccC---ccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-DGEVKIVDFGLSRETANTFD---KKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~l 76 (488)
+++..++.++.||+.||.|||++|++||||||+||+++. ++.++|+|||++........ ......++..|+|||.+
T Consensus 111 l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 190 (342)
T cd07854 111 LSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLL 190 (342)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHH
Confidence 578899999999999999999999999999999999974 55789999999875432211 11233578899999987
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCC------------------------C---
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPG------------------------L--- 129 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~------------------------~--- 129 (488)
... ..++.++|+|||||++|+|++|+.||.+.........+....+.. .
T Consensus 191 ~~~----~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (342)
T cd07854 191 LSP----NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLR 266 (342)
T ss_pred hCc----cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHH
Confidence 542 457789999999999999999999998776555444433211000 0
Q ss_pred CCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 130 YRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 130 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
......+.++++||.+||..||.+|||+.+++.||||+.+
T Consensus 267 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 267 DLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 0112467889999999999999999999999999999864
No 253
>KOG4645|consensus
Probab=99.94 E-value=2.5e-27 Score=255.56 Aligned_cols=166 Identities=30% Similarity=0.600 Sum_probs=138.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc----CccccccCCCccccchhhc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF----DKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~l~ 77 (488)
+|...+.+..|++.|+.|||++|||||||||.||+++.+|.+|++|||.|....... .......|||.|||||++.
T Consensus 1332 dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit 1411 (1509)
T KOG4645|consen 1332 DEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVIT 1411 (1509)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhc
Confidence 466778999999999999999999999999999999999999999999998775442 1224558999999999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP-TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
+... .+...+.|||||||++.||+||+.||...+. ..+++++-.+..|.. |..+|++.++||..||..||++|++
T Consensus 1412 ~t~~--kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~--P~~ls~~g~dFle~Cl~~dP~~Rw~ 1487 (1509)
T KOG4645|consen 1412 GTKG--KGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQI--PERLSSEGRDFLEHCLEQDPKMRWT 1487 (1509)
T ss_pred cccc--CCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCC--chhhhHhHHHHHHHHHhcCchhhhH
Confidence 7422 4556789999999999999999999976544 455566655665654 4459999999999999999999999
Q ss_pred HHHHhcCcCCCCCCC
Q psy9090 157 MSELLEHPFITSLPE 171 (488)
Q Consensus 157 ~~ell~hp~f~~~~~ 171 (488)
+.|+++|.|-+.-..
T Consensus 1488 ~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1488 ASQLLEHAFGKSCTD 1502 (1509)
T ss_pred HHHHHHhhccccccc
Confidence 999999999876443
No 254
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.94 E-value=2.9e-26 Score=224.65 Aligned_cols=162 Identities=27% Similarity=0.562 Sum_probs=129.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++.+++.++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++........ ......+++.|+|||++.+.
T Consensus 97 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~ 176 (288)
T cd07833 97 LPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGD 176 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCC
Confidence 46789999999999999999999999999999999999999999999999876554322 33345678899999998762
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC---C------------------CCC--------C
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP---P------------------PGL--------Y 130 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~---~------------------~~~--------~ 130 (488)
..++.++|+||+|+++|+|++|.+||.+.........+.... . +.. .
T Consensus 177 ----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (288)
T cd07833 177 ----TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERR 252 (288)
T ss_pred ----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHh
Confidence 267889999999999999999999998765544333322100 0 000 0
Q ss_pred CCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 131 RASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 131 ~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.+..++.++++||++||..+|++|||+++++.||||
T Consensus 253 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 253 YPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 112347889999999999999999999999999998
No 255
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94 E-value=2.4e-26 Score=230.69 Aligned_cols=166 Identities=30% Similarity=0.497 Sum_probs=130.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC----ccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD----KKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~l 76 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||+++....... ......|++.|+|||.+
T Consensus 102 ~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 181 (332)
T cd07857 102 LTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIM 181 (332)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHH
Confidence 46889999999999999999999999999999999999999999999999876542211 12335789999999987
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC-------------------------CCCCC--
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN-------------------------PPPGL-- 129 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~-------------------------~~~~~-- 129 (488)
.+. ..++.++|+||+||++|+|++|.+||...........++.. ..+..
T Consensus 182 ~~~----~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (332)
T cd07857 182 LSF----QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPF 257 (332)
T ss_pred hCC----CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcch
Confidence 642 45788999999999999999999999876543333322210 00000
Q ss_pred -CCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 130 -YRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 130 -~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
......+..+.+++.+||..+|.+|||+.+++.|||++...
T Consensus 258 ~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 258 ESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 01123478899999999999999999999999999997653
No 256
>KOG0666|consensus
Probab=99.94 E-value=1.3e-26 Score=216.46 Aligned_cols=166 Identities=31% Similarity=0.497 Sum_probs=130.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC----CcEEEEecCCccccccccCc---cccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD----GEVKIVDFGLSRETANTFDK---KKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~----~~vkL~Dfg~a~~~~~~~~~---~~~~~gt~~y~aP 73 (488)
++...++.|+.||+.|+.|||++=|+||||||.|||+..+ |.|||+|+|+++.+..+... ....+-|.+|+||
T Consensus 129 lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAP 208 (438)
T KOG0666|consen 129 LPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAP 208 (438)
T ss_pred CCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecCh
Confidence 4677899999999999999999999999999999999877 89999999999987654332 2345678999999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh---------HHHHHHH---HhCCCCCCC----C------
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP---------TRALFQI---VRNPPPGLY----R------ 131 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~---------~~~~~~~---~~~~~~~~~----~------ 131 (488)
|.+.+. ..|+.++|+|++|||+.||+|-.+.|.+... ..++.+| +..+....+ .
T Consensus 209 ELLLGa----~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~ 284 (438)
T KOG0666|consen 209 ELLLGA----RHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQT 284 (438)
T ss_pred HHhccc----ccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHH
Confidence 999984 6799999999999999999999998854321 1223333 322111110 0
Q ss_pred -----------C----------CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 132 -----------A----------SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 132 -----------~----------~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
+ ..-++...+|+.+||.+||.+|.|++++|+|+||+..+
T Consensus 285 ~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 285 LLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred HHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 0 01145578999999999999999999999999998753
No 257
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.94 E-value=3.1e-26 Score=220.45 Aligned_cols=159 Identities=29% Similarity=0.606 Sum_probs=132.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCc-EEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGE-VKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~-vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||.|||+++++|+||||+||+++.++. ++|+|||.+..............|++.|+|||++.+
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~- 176 (257)
T cd08225 98 FSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQN- 176 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcC-
Confidence 467889999999999999999999999999999999998865 699999998766543333334568899999999865
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+||+|+++|+|++|..||..........++.....+. ....++..++++|.+||..+|++|||+.+
T Consensus 177 ----~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 250 (257)
T cd08225 177 ----RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP--ISPNFSRDLRSLISQLFKVSPRDRPSITS 250 (257)
T ss_pred ----CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC--CCCCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 457889999999999999999999998776665555554443322 23457889999999999999999999999
Q ss_pred HhcCcCC
Q psy9090 160 LLEHPFI 166 (488)
Q Consensus 160 ll~hp~f 166 (488)
++.||||
T Consensus 251 ll~~~~~ 257 (257)
T cd08225 251 ILKRPFL 257 (257)
T ss_pred HhhCCCC
Confidence 9999997
No 258
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94 E-value=2.3e-26 Score=221.45 Aligned_cols=156 Identities=28% Similarity=0.521 Sum_probs=131.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++++.+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|++.|+|||++.+
T Consensus 97 ~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-- 174 (255)
T cd08219 97 FPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWEN-- 174 (255)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHcc--
Confidence 467889999999999999999999999999999999999999999999998765443233345678899999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...+.......+....... .+..++..+.++|.+||..+|++|||+.++
T Consensus 175 ---~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i 249 (255)
T cd08219 175 ---MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP--LPSHYSYELRSLIKQMFKRNPRSRPSATTI 249 (255)
T ss_pred ---CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC--CCcccCHHHHHHHHHHHhCCcccCCCHHHH
Confidence 567889999999999999999999998877665555554443322 245678999999999999999999999999
Q ss_pred hcC
Q psy9090 161 LEH 163 (488)
Q Consensus 161 l~h 163 (488)
+..
T Consensus 250 l~~ 252 (255)
T cd08219 250 LSR 252 (255)
T ss_pred hhc
Confidence 864
No 259
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.94 E-value=2.7e-26 Score=230.47 Aligned_cols=166 Identities=29% Similarity=0.460 Sum_probs=131.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccc--------------ccCccccccC
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETAN--------------TFDKKKTFLG 66 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~--------------~~~~~~~~~g 66 (488)
+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++..... .........+
T Consensus 116 ~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (335)
T PTZ00024 116 LTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVV 195 (335)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccccccccccccccccc
Confidence 47888999999999999999999999999999999999999999999999875541 1111223356
Q ss_pred CCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh---CCCCCC--------------
Q psy9090 67 SPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR---NPPPGL-------------- 129 (488)
Q Consensus 67 t~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~---~~~~~~-------------- 129 (488)
++.|+|||.+.+. ..++.++|+|||||++|+|++|.+||.+.........+.. .+....
T Consensus 196 ~~~y~aPE~~~~~----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (335)
T PTZ00024 196 TLWYRAPELLMGA----EKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFT 271 (335)
T ss_pred ccCCCCChhcccC----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccC
Confidence 7889999998652 3468899999999999999999999988776555444332 111100
Q ss_pred --------CCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 130 --------YRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 130 --------~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
......+..+.++|.+||..+|++|||+++++.||||+..+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 272 PRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred cCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 00124478899999999999999999999999999998754
No 260
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94 E-value=4.5e-26 Score=223.87 Aligned_cols=163 Identities=26% Similarity=0.481 Sum_probs=132.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~~ 79 (488)
+...+..++.||+.||.|||++|++||||||+||+++.++.++|+|||+++....... ......++..|+|||.+.+
T Consensus 117 ~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~- 195 (288)
T cd05061 117 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD- 195 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc-
Confidence 3457788999999999999999999999999999999999999999999875432211 1122345678999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+||++|+|++ |..||.+.........+.....+. .+...++.+.+++.+||..+|++|||+.
T Consensus 196 ----~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~ 269 (288)
T cd05061 196 ----GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD--QPDNCPERVTDLMRMCWQFNPKMRPTFL 269 (288)
T ss_pred ----CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHH
Confidence 567889999999999999998 789998877665555444433222 2345688999999999999999999999
Q ss_pred HHhc------CcCCCCCCC
Q psy9090 159 ELLE------HPFITSLPE 171 (488)
Q Consensus 159 ell~------hp~f~~~~~ 171 (488)
++++ ||||..++|
T Consensus 270 ~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 270 EIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred HHHHHHHhhcCCCCCCCCC
Confidence 9986 999998876
No 261
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.94 E-value=3.5e-26 Score=221.59 Aligned_cols=160 Identities=32% Similarity=0.666 Sum_probs=130.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc---CccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---DKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~l~ 77 (488)
+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....... .......|+..|+|||.+.
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 182 (265)
T cd06652 103 LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS 182 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhc
Confidence 4678889999999999999999999999999999999999999999999987543211 1123346888999999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
+ ..++.++|+|||||++|+|++|+.||..........+....... ...+...+..+.++|.+|+. +|++||++
T Consensus 183 ~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~ 255 (265)
T cd06652 183 G-----EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN-PVLPPHVSDHCRDFLKRIFV-EAKLRPSA 255 (265)
T ss_pred C-----CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC-CCCchhhCHHHHHHHHHHhc-ChhhCCCH
Confidence 5 45788999999999999999999999877655555554433222 22345678889999999994 89999999
Q ss_pred HHHhcCcCCC
Q psy9090 158 SELLEHPFIT 167 (488)
Q Consensus 158 ~ell~hp~f~ 167 (488)
+++++|||+.
T Consensus 256 ~~il~~~~~~ 265 (265)
T cd06652 256 DELLRHTFVH 265 (265)
T ss_pred HHHhcCcccC
Confidence 9999999984
No 262
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.94 E-value=5.8e-26 Score=226.03 Aligned_cols=163 Identities=39% Similarity=0.816 Sum_probs=135.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++.... ......|+..|+|||++....
T Consensus 118 l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~----~~~~~~~~~~y~aPE~~~~~~ 193 (313)
T cd06633 118 LQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS----PANSFVGTPYWMAPEVILAMD 193 (313)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC----CCCCccccccccChhhccccC
Confidence 4678889999999999999999999999999999999999999999999886432 223457889999999985311
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
...++.++|+||+||++|+|++|.+||...........+.....+.. ....++..+++|+.+||+.+|.+||++.++
T Consensus 194 --~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~ 270 (313)
T cd06633 194 --EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL-QSNEWTDSFRGFVDYCLQKIPQERPASAEL 270 (313)
T ss_pred --CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-CccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 14578899999999999999999999988776666666555433332 234578889999999999999999999999
Q ss_pred hcCcCCCCCC
Q psy9090 161 LEHPFITSLP 170 (488)
Q Consensus 161 l~hp~f~~~~ 170 (488)
+.||||...+
T Consensus 271 l~~~~~~~~~ 280 (313)
T cd06633 271 LRHDFVRRDR 280 (313)
T ss_pred hcCcccCCCc
Confidence 9999998754
No 263
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.94 E-value=3.3e-26 Score=227.18 Aligned_cols=161 Identities=30% Similarity=0.659 Sum_probs=128.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||.|||+ ++++||||||+|||++.++.++|+|||++...... ......|++.|+|||++.+
T Consensus 96 ~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~aPE~~~~- 172 (308)
T cd06615 96 IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQG- 172 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc--ccccCCCCcCccChhHhcC-
Confidence 4688899999999999999997 69999999999999999999999999998654332 2345578999999999865
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC---------------------------------
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP--------------------------------- 126 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~--------------------------------- 126 (488)
..++.++|+||+||++|+|++|..||........ ........
T Consensus 173 ----~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (308)
T cd06615 173 ----THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIV 247 (308)
T ss_pred ----CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHh
Confidence 4578899999999999999999999965443221 11111100
Q ss_pred ---CCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 127 ---PGLYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 127 ---~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
++......++.++++++.+||..+|++|||+.++++||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 248 NEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0010112357889999999999999999999999999999764
No 264
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.94 E-value=2.4e-26 Score=221.71 Aligned_cols=158 Identities=30% Similarity=0.607 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||++||.|||++|++|+||+|+||+++.++.++|+|||++...... .......|+..|+|||.+..
T Consensus 97 l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~-- 173 (258)
T cd05578 97 FSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD-TLTTSTSGTPGYMAPEVLCR-- 173 (258)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC-ccccccCCChhhcCHHHHcc--
Confidence 568899999999999999999999999999999999999999999999998765433 12334568889999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh--HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH-
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP--TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~- 157 (488)
..++.++|+||+|+++|+|++|..||..... .....+.... .....+..++..+.++|.+||..+|.+||++
T Consensus 174 ---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 248 (258)
T cd05578 174 ---QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDN 248 (258)
T ss_pred ---cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCcc
Confidence 4578899999999999999999999987663 2222233222 2222355678999999999999999999999
Q ss_pred -HHHhcCcCC
Q psy9090 158 -SELLEHPFI 166 (488)
Q Consensus 158 -~ell~hp~f 166 (488)
+++++||||
T Consensus 249 ~~~l~~~~~~ 258 (258)
T cd05578 249 LKDLKNHPYF 258 (258)
T ss_pred HHHHhcCCCC
Confidence 999999998
No 265
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=1.1e-26 Score=211.20 Aligned_cols=149 Identities=25% Similarity=0.375 Sum_probs=119.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|++.+++.++.||+.||+|||+++ ||+|||++.++.+|+ ||++...... ...||+.|+|||++.+
T Consensus 14 l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-----~~~g~~~y~aPE~~~~-- 78 (176)
T smart00750 14 LNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE-----QSRVDPYFMAPEVIQG-- 78 (176)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc-----cCCCcccccChHHhcC--
Confidence 689999999999999999999998 999999999999999 9998765432 2368999999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHH-HHHHHhCCCCCC----CCCCCcCH--HHHHHHHHhcccCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRA-LFQIVRNPPPGL----YRASNWSQ--HYVDFIAECLEKNPEH 153 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~----~~~~~~s~--~~~~li~~~L~~dP~~ 153 (488)
..|+.++||||+||++|+|++|..||........ ...+.....+.. ..+..++. .++++|.+||..+|.+
T Consensus 79 ---~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~ 155 (176)
T smart00750 79 ---QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQR 155 (176)
T ss_pred ---CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhccccc
Confidence 6788999999999999999999999976544322 222222211111 11222344 6899999999999999
Q ss_pred CCCHHHHhcCcCCC
Q psy9090 154 RPYMSELLEHPFIT 167 (488)
Q Consensus 154 Rps~~ell~hp~f~ 167 (488)
||++.++++|+|+.
T Consensus 156 Rp~~~~ll~~~~~~ 169 (176)
T smart00750 156 REAANHYLAHCRAL 169 (176)
T ss_pred ccCHHHHHHHHHHH
Confidence 99999999999875
No 266
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.94 E-value=4.3e-26 Score=218.74 Aligned_cols=159 Identities=39% Similarity=0.800 Sum_probs=134.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.+|.|||++|++||||+|+||+++.++.++|+|||++..............+++.|+|||.+.+
T Consensus 96 l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-- 173 (254)
T cd06627 96 FPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEM-- 173 (254)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcC--
Confidence 478899999999999999999999999999999999999999999999999876544333344568899999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||.................+. .+...++.+.+++.+||..+|++|||+.++
T Consensus 174 ---~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 248 (254)
T cd06627 174 ---SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPP--LPEGISPELKDFLMQCFQKDPNLRPTAKQL 248 (254)
T ss_pred ---CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCC--CCCCCCHHHHHHHHHHHhCChhhCcCHHHH
Confidence 447889999999999999999999998776555555544333332 345678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
+.||||
T Consensus 249 l~~~~~ 254 (254)
T cd06627 249 LKHPWI 254 (254)
T ss_pred hcCCCC
Confidence 999997
No 267
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=4.2e-26 Score=223.23 Aligned_cols=156 Identities=25% Similarity=0.419 Sum_probs=128.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...... .......+++.|+|||.+.+
T Consensus 121 ~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 200 (283)
T cd05091 121 LEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY 200 (283)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhc
Confidence 3567788999999999999999999999999999999999999999999987653221 11233456789999999865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|+|++ |..||.+.........+....... .+..++..+.+++..||+.+|.+||++
T Consensus 201 -----~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~RP~~ 273 (283)
T cd05091 201 -----GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLP--CPDDCPAWVYTLMLECWNEFPSRRPRF 273 (283)
T ss_pred -----CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHhCCCcccCCCH
Confidence 567889999999999999998 889998877666555555443322 345789999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++..
T Consensus 274 ~~i~~~ 279 (283)
T cd05091 274 KDIHSR 279 (283)
T ss_pred HHHHHH
Confidence 999863
No 268
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.94 E-value=4.9e-26 Score=223.62 Aligned_cols=155 Identities=27% Similarity=0.484 Sum_probs=128.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||++....... .......+++.|+|||++.+
T Consensus 117 l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 196 (288)
T cd05093 117 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 196 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc
Confidence 4788999999999999999999999999999999999999999999999987553221 11223345778999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |.+||...........+.....+. .+..++..+.+++.+||..+|.+|||+
T Consensus 197 -----~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~ 269 (288)
T cd05093 197 -----RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ--RPRTCPKEVYDLMLGCWQREPHMRLNI 269 (288)
T ss_pred -----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCH
Confidence 567889999999999999998 999998877666666665543322 244678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.+++.
T Consensus 270 ~~v~~ 274 (288)
T cd05093 270 KEIHS 274 (288)
T ss_pred HHHHH
Confidence 99864
No 269
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94 E-value=4.5e-26 Score=221.49 Aligned_cols=156 Identities=24% Similarity=0.431 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++....... ......+++.|+|||.+..
T Consensus 109 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 188 (272)
T cd05075 109 LPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD 188 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccC
Confidence 46788999999999999999999999999999999999999999999999876543211 1122345678999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |..||.+.........+...... ..+..++..+.++|.+||..+|++|||+
T Consensus 189 -----~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 261 (272)
T cd05075 189 -----RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL--KQPPDCLDGLYSLMSSCWLLNPKDRPSF 261 (272)
T ss_pred -----CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 568899999999999999999 89999877665555544443322 2345678999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++++
T Consensus 262 ~~l~~~ 267 (272)
T cd05075 262 ETLRCE 267 (272)
T ss_pred HHHHHH
Confidence 999863
No 270
>PHA02988 hypothetical protein; Provisional
Probab=99.94 E-value=3.8e-26 Score=224.06 Aligned_cols=155 Identities=17% Similarity=0.253 Sum_probs=127.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++..... .....|++.|+|||++.+.
T Consensus 119 ~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~ 195 (283)
T PHA02988 119 LSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP---PFKNVNFMVYFSYKMLNDI 195 (283)
T ss_pred CChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc---cccccCcccccCHHHhhhc
Confidence 4567888999999999999998 49999999999999999999999999998754332 2345688999999998641
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
...++.++|||||||++|+|++|..||.+.........+..... ....+...++.++++|.+||+.||++|||+++
T Consensus 196 ---~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~e 271 (283)
T PHA02988 196 ---FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNN-SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKE 271 (283)
T ss_pred ---cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC-CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHH
Confidence 14688999999999999999999999998876665555543322 22234467899999999999999999999999
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
+++
T Consensus 272 ll~ 274 (283)
T PHA02988 272 ILY 274 (283)
T ss_pred HHH
Confidence 985
No 271
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.94 E-value=3.6e-26 Score=233.16 Aligned_cols=156 Identities=28% Similarity=0.466 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ......+++.|+|||++..
T Consensus 209 l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 288 (374)
T cd05106 209 LDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFD 288 (374)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcC
Confidence 46788999999999999999999999999999999999999999999999876533211 1122335567999999865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++||||+||++|+|++ |+.||.................. ...+...++++.+++.+||..+|++|||+
T Consensus 289 -----~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 362 (374)
T cd05106 289 -----CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ-MSRPDFAPPEIYSIMKMCWNLEPTERPTF 362 (374)
T ss_pred -----CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC-ccCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 568899999999999999997 99999876654444444443221 12344568999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 363 ~~l~~ 367 (374)
T cd05106 363 SQISQ 367 (374)
T ss_pred HHHHH
Confidence 99875
No 272
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.94 E-value=5.6e-26 Score=218.66 Aligned_cols=156 Identities=29% Similarity=0.478 Sum_probs=131.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++.+++.++.||+.||+|||++|++||||+|+||+++.++.++|+|||.+....... .......+++.|+|||.+..
T Consensus 102 ~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 181 (262)
T cd00192 102 LSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKD 181 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhcc
Confidence 5789999999999999999999999999999999999999999999999997664431 22334567889999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||||+++|+|++ |..||...........+...... ..+..++.++.+++.+||..+|.+|||+
T Consensus 182 -----~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 254 (262)
T cd00192 182 -----GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL--PKPEYCPDELYELMLSCWQLDPEDRPTF 254 (262)
T ss_pred -----CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC--CCCccCChHHHHHHHHHccCCcccCcCH
Confidence 468889999999999999998 69999888766665555543222 2355678999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++++
T Consensus 255 ~~l~~~ 260 (262)
T cd00192 255 SELVER 260 (262)
T ss_pred HHHHHh
Confidence 999875
No 273
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=5.6e-26 Score=219.44 Aligned_cols=158 Identities=32% Similarity=0.653 Sum_probs=132.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.|++.||.|||++|++|+||+|+||+++. +.++|+|||++..............|++.|+|||.+.+
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-- 179 (260)
T cd08222 103 LSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKH-- 179 (260)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHcc--
Confidence 468889999999999999999999999999999999975 67999999998765443333445568899999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...........+.....+.. +..++.++.++|.+||..+|++||++.++
T Consensus 180 ---~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 254 (260)
T cd08222 180 ---QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSL--PETYSRQLNSIMQSMLNKDPSLRPSAAEI 254 (260)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCC--cchhcHHHHHHHHHHhcCChhhCcCHHHH
Confidence 5577899999999999999999999987766555555554433332 45678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++||||
T Consensus 255 l~~~~~ 260 (260)
T cd08222 255 LRNPFI 260 (260)
T ss_pred hhCCCC
Confidence 999997
No 274
>KOG0669|consensus
Probab=99.94 E-value=3.1e-26 Score=208.27 Aligned_cols=166 Identities=25% Similarity=0.449 Sum_probs=133.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc----cCccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT----FDKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~----~~~~~~~~gt~~y~aPE~l 76 (488)
|+..+|+.++.+++.||.|+|.+.|+|||+||+|+||+.+|.+||+|||+++.+... .......+-|.+|++||.+
T Consensus 121 ~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEll 200 (376)
T KOG0669|consen 121 FSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELL 200 (376)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHh
Confidence 467899999999999999999999999999999999999999999999999755322 1223345669999999999
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHH---hCCCCCCCC----------------------
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIV---RNPPPGLYR---------------------- 131 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~---~~~~~~~~~---------------------- 131 (488)
.+. ..|+++.|+|..||++.+|++|.+.+.+.+....+.-|. ....+..++
T Consensus 201 LG~----r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~r 276 (376)
T KOG0669|consen 201 LGD----REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKR 276 (376)
T ss_pred hcc----cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhh
Confidence 984 679999999999999999999999998887655544332 111111110
Q ss_pred -------CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 132 -------ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 132 -------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
+-.-.+++.+|+.+||..||.+|++++++++|.||+.-+
T Consensus 277 kv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 277 KVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred hhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 011135778999999999999999999999999998644
No 275
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=5.5e-26 Score=223.11 Aligned_cols=163 Identities=39% Similarity=0.739 Sum_probs=130.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++...... ......++..|+|||.+.+
T Consensus 102 l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~~pE~~~~-- 177 (287)
T cd06621 102 IGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS--LAGTFTGTSFYMAPERIQG-- 177 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc--ccccccCCccccCHHHhcC--
Confidence 467788999999999999999999999999999999999999999999998755432 1224467889999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCC-----ChHHHHHHHHhCCCCCCCC----CCCcCHHHHHHHHHhcccCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDM-----HPTRALFQIVRNPPPGLYR----ASNWSQHYVDFIAECLEKNP 151 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~-----~~~~~~~~~~~~~~~~~~~----~~~~s~~~~~li~~~L~~dP 151 (488)
..++.++|+|||||++|+|++|..||... ...+....+.....+.... ...+++.+.++|.+||..+|
T Consensus 178 ---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 254 (287)
T cd06621 178 ---KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDP 254 (287)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCc
Confidence 56888999999999999999999999765 2223233322222221111 13467899999999999999
Q ss_pred CCCCCHHHHhcCcCCCCCC
Q psy9090 152 EHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 152 ~~Rps~~ell~hp~f~~~~ 170 (488)
.+|||+.+++.||||+...
T Consensus 255 ~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 255 TRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred ccCCCHHHHHhCccccccc
Confidence 9999999999999997643
No 276
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.94 E-value=4.5e-26 Score=229.22 Aligned_cols=157 Identities=29% Similarity=0.504 Sum_probs=126.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
|++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++........ ......++..|+|||++.+
T Consensus 170 l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 249 (337)
T cd05054 170 LTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFD 249 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcC
Confidence 46788999999999999999999999999999999999999999999999976532211 1223455678999999876
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++||||+||++|+|++ |..||.+..........+..... ...+..+++++.+++.+||+.+|++||++
T Consensus 250 -----~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~RPs~ 323 (337)
T cd05054 250 -----KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR-MRAPEYATPEIYSIMLDCWHNNPEDRPTF 323 (337)
T ss_pred -----CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC-CCCCccCCHHHHHHHHHHccCChhhCcCH
Confidence 678899999999999999997 99999875544433333332221 12345678999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.++++|
T Consensus 324 ~ell~~ 329 (337)
T cd05054 324 SELVEI 329 (337)
T ss_pred HHHHHH
Confidence 999875
No 277
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94 E-value=6.8e-26 Score=218.68 Aligned_cols=155 Identities=26% Similarity=0.421 Sum_probs=127.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc---cccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK---KKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~l~ 77 (488)
+++..+..++.||+.||+|||++|++||||||.||+++.++.+||+|||++......... .....+++.|+|||.+.
T Consensus 92 ~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 171 (257)
T cd05116 92 VTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMN 171 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhc
Confidence 478889999999999999999999999999999999999999999999998765432111 12223457899999986
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
. ..++.++|+|||||++|+|++ |.+||...........+.....+. .+..+++++.++|.+||+.||++||+
T Consensus 172 ~-----~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~l~~li~~~~~~~p~~Rp~ 244 (257)
T cd05116 172 Y-----YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERME--CPQRCPPEMYDLMKLCWTYGVDERPG 244 (257)
T ss_pred c-----CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHhccCchhCcC
Confidence 5 567889999999999999997 999998877665555554433222 34568999999999999999999999
Q ss_pred HHHHhc
Q psy9090 157 MSELLE 162 (488)
Q Consensus 157 ~~ell~ 162 (488)
+.+|..
T Consensus 245 ~~~i~~ 250 (257)
T cd05116 245 FAVVEL 250 (257)
T ss_pred HHHHHH
Confidence 998864
No 278
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93 E-value=6.6e-26 Score=218.12 Aligned_cols=160 Identities=38% Similarity=0.776 Sum_probs=131.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.+||+|||++...... .......|++.|+|||.+...
T Consensus 99 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~- 176 (258)
T cd06632 99 FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF-SFAKSFKGSPYWMAPEVIAQQ- 176 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc-ccccccCCCcceeCHHHhcCC-
Confidence 467888999999999999999999999999999999999999999999998765433 223455688999999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|..||...........+...... ...+..+++.+.+++.+||..+|.+||++.++
T Consensus 177 ---~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~ 252 (258)
T cd06632 177 ---GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL-PPIPDHLSDEAKDFILKCLQRDPSLRPTAAEL 252 (258)
T ss_pred ---CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC-CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHH
Confidence 23788999999999999999999999776654444444331111 12345678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
+.|||+
T Consensus 253 l~~~~~ 258 (258)
T cd06632 253 LEHPFV 258 (258)
T ss_pred hcCCCC
Confidence 999996
No 279
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.93 E-value=8.6e-26 Score=216.42 Aligned_cols=158 Identities=34% Similarity=0.616 Sum_probs=133.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+
T Consensus 90 l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-- 167 (250)
T cd05123 90 FSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLG-- 167 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCC--
Confidence 478899999999999999999999999999999999999999999999998765443223445568889999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|+||||+++|++++|..||...........+... ....+...+..+.++|++||..||++||++
T Consensus 168 ---~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~ 241 (250)
T cd05123 168 ---KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD---PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGA 241 (250)
T ss_pred ---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccH
Confidence 45678999999999999999999999777654444444432 223445568999999999999999999999
Q ss_pred HHHhcCcCC
Q psy9090 158 SELLEHPFI 166 (488)
Q Consensus 158 ~ell~hp~f 166 (488)
+++++||||
T Consensus 242 ~~l~~~~~f 250 (250)
T cd05123 242 EEIKAHPFF 250 (250)
T ss_pred HHHHhCCCC
Confidence 999999998
No 280
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.93 E-value=6.6e-26 Score=223.76 Aligned_cols=155 Identities=27% Similarity=0.453 Sum_probs=125.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++...... ........+..|+|||++.+
T Consensus 116 l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-- 192 (297)
T cd05089 116 LTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY-VKKTMGRLPVRWMAIESLNY-- 192 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce-eccCCCCcCccccCchhhcc--
Confidence 457788999999999999999999999999999999999999999999998643221 11112223457999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|||||||++|+|++ |..||...........+.....+. .+..++..+++|+.+||..+|.+|||+++
T Consensus 193 ---~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 267 (297)
T cd05089 193 ---SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRME--KPRNCDDEVYELMRQCWRDRPYERPPFAQ 267 (297)
T ss_pred ---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 568899999999999999997 999998887766655555443222 34567899999999999999999999999
Q ss_pred HhcC
Q psy9090 160 LLEH 163 (488)
Q Consensus 160 ll~h 163 (488)
+++.
T Consensus 268 i~~~ 271 (297)
T cd05089 268 ISVQ 271 (297)
T ss_pred HHHH
Confidence 9753
No 281
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.93 E-value=2.6e-26 Score=219.13 Aligned_cols=151 Identities=24% Similarity=0.328 Sum_probs=123.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||.|||++|++||||||+||+++.++.++++|||.+...... .....++..|+|||.+..
T Consensus 82 l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE~~~~-- 156 (237)
T cd05576 82 IPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPEVGGI-- 156 (237)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCcccCC--
Confidence 578899999999999999999999999999999999999999999999987655432 223355778999998865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH---
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM--- 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~--- 157 (488)
..++.++|+||+|+++|+|++|..|+...... + ........+..+++.++++|.+||+.||++||++
T Consensus 157 ---~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 157 ---SEETEACDWWSLGAILFELLTGKTLVECHPSG-----I--NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred ---CCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c--ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence 56788999999999999999999987543211 0 0011112345578999999999999999999985
Q ss_pred --HHHhcCcCC
Q psy9090 158 --SELLEHPFI 166 (488)
Q Consensus 158 --~ell~hp~f 166 (488)
+++++||||
T Consensus 227 ~~~~~~~h~~~ 237 (237)
T cd05576 227 GVEDIKSHPFF 237 (237)
T ss_pred chHHHHcCCCC
Confidence 999999997
No 282
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.93 E-value=1e-25 Score=219.87 Aligned_cols=162 Identities=28% Similarity=0.548 Sum_probs=129.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++..............++..|+|||.+.+.
T Consensus 95 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~- 173 (282)
T cd07829 95 LSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS- 173 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCC-
Confidence 5788999999999999999999999999999999999999999999999987654432233344567889999998652
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CC-----------------CCC------CCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PP-----------------PGL------YRASN 134 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~-----------------~~~------~~~~~ 134 (488)
..++.++|+|||||++|++++|.+||..........++... +. +.. .....
T Consensus 174 ---~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (282)
T cd07829 174 ---KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPR 250 (282)
T ss_pred ---cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhccc
Confidence 36788999999999999999999999877655444333221 00 000 00123
Q ss_pred cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 135 WSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 135 ~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.+..+.++|.+||..+|++||++.+++.||||
T Consensus 251 ~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 251 LDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 47789999999999999999999999999998
No 283
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.93 E-value=6.8e-26 Score=221.18 Aligned_cols=155 Identities=27% Similarity=0.465 Sum_probs=128.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++....... .......+++.|+|||++.+
T Consensus 119 l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 198 (280)
T cd05049 119 LTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY 198 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc
Confidence 4677889999999999999999999999999999999999999999999987543211 11223345788999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|+|++ |..||.+.........+.....+. .+..++..+.+++.+||..||++||++
T Consensus 199 -----~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~ 271 (280)
T cd05049 199 -----RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQ--RPRTCPSEVYDIMLGCWKRDPQQRINI 271 (280)
T ss_pred -----CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence 568899999999999999998 999998877666655555443322 245678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 272 ~eil~ 276 (280)
T cd05049 272 KDIHE 276 (280)
T ss_pred HHHHH
Confidence 99986
No 284
>KOG1006|consensus
Probab=99.93 E-value=4.1e-27 Score=215.58 Aligned_cols=167 Identities=34% Similarity=0.590 Sum_probs=139.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++|+.+-.|..-.+.||.||.. .+|||||+||+|||++..|.|||||||.+-.+..... .+.-.|-..|+|||.+...
T Consensus 164 ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA-kT~daGCrpYmAPERi~p~ 242 (361)
T KOG1006|consen 164 IPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA-KTVDAGCRPYMAPERIDPS 242 (361)
T ss_pred CcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHH-hhhccCCccccChhccCCc
Confidence 5778888888889999999975 5899999999999999999999999999876654322 2233678899999998653
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCC---cCHHHHHHHHHhcccCCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP-TRALFQIVRNPPPGLYRASN---WSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~---~s~~~~~li~~~L~~dP~~Rp 155 (488)
..+|+.++|+||||++|||+.||..|+.+... .+++.+++.+.+|.+..+.. ++..++.+|..||.+|-..||
T Consensus 243 ---~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rp 319 (361)
T KOG1006|consen 243 ---DKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRP 319 (361)
T ss_pred ---cCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCc
Confidence 24699999999999999999999999987654 45566677777666655544 799999999999999999999
Q ss_pred CHHHHhcCcCCCCCCC
Q psy9090 156 YMSELLEHPFITSLPE 171 (488)
Q Consensus 156 s~~ell~hp~f~~~~~ 171 (488)
+..+++.+||++....
T Consensus 320 ky~~Lk~~~fyr~y~~ 335 (361)
T KOG1006|consen 320 KYDDLKKFPFYRMYAV 335 (361)
T ss_pred chhhhhcCchhhhhhh
Confidence 9999999999986543
No 285
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93 E-value=1e-25 Score=219.15 Aligned_cols=163 Identities=35% Similarity=0.760 Sum_probs=129.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||++....... .......|+..|+|||.+..
T Consensus 105 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 184 (272)
T cd06629 105 FEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHS 184 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhcc
Confidence 4678899999999999999999999999999999999999999999999987543221 11233467889999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC-CCCC--CCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP-PGLY--RASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~--~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
.. ..++.++|+||||+++|++++|..||...........+..... +... ....++..+.++|.+||..+|.+||
T Consensus 185 ~~---~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 261 (272)
T cd06629 185 YS---QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRP 261 (272)
T ss_pred cc---CCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCC
Confidence 21 2478899999999999999999999976655444444332211 1111 1234688999999999999999999
Q ss_pred CHHHHhcCcCC
Q psy9090 156 YMSELLEHPFI 166 (488)
Q Consensus 156 s~~ell~hp~f 166 (488)
|++++++|||+
T Consensus 262 s~~~il~~~~~ 272 (272)
T cd06629 262 TARELLQHPFI 272 (272)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
No 286
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.93 E-value=5.9e-26 Score=220.01 Aligned_cols=161 Identities=33% Similarity=0.629 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-cEEEEecCCccccccccC----ccccccCCCccccchh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-EVKIVDFGLSRETANTFD----KKKTFLGSPSWMAPEI 75 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~ 75 (488)
+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||++........ ......++..|+|||.
T Consensus 100 ~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~ 179 (268)
T cd06630 100 FKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV 179 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhH
Confidence 47888999999999999999999999999999999998776 599999999876543211 1223467889999999
Q ss_pred hcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH---HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 76 MRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT---RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 76 l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
+.+ ..++.++|+||+|+++|+|++|..||...... ....+...... ....+...++.+.+++.+||..+|+
T Consensus 180 ~~~-----~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~ 253 (268)
T cd06630 180 LRG-----EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT-APSIPEHLSPGLRDVTLRCLELQPE 253 (268)
T ss_pred hcc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC-CCCCchhhCHHHHHHHHHHcCCCcc
Confidence 865 56788999999999999999999999654322 22222221111 1123445789999999999999999
Q ss_pred CCCCHHHHhcCcCCC
Q psy9090 153 HRPYMSELLEHPFIT 167 (488)
Q Consensus 153 ~Rps~~ell~hp~f~ 167 (488)
+||++.++++||||+
T Consensus 254 ~R~~~~~ll~~~~~~ 268 (268)
T cd06630 254 DRPPSRELLKHPVFR 268 (268)
T ss_pred cCcCHHHHhcCcccC
Confidence 999999999999985
No 287
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.93 E-value=5e-26 Score=229.63 Aligned_cols=164 Identities=27% Similarity=0.499 Sum_probs=130.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++..... ......+++.|+|||.+.+.
T Consensus 117 l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~- 192 (345)
T cd07877 117 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNW- 192 (345)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc---cccccccCCCccCHHHHhCc-
Confidence 46788999999999999999999999999999999999999999999999875432 22345688999999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC----------------------CCCC------CC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP----------------------PGLY------RA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~----------------------~~~~------~~ 132 (488)
..++.++|+||+||++|+|++|++||...........+..... +... ..
T Consensus 193 ---~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (345)
T cd07877 193 ---MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 269 (345)
T ss_pred ---cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhc
Confidence 4578899999999999999999999977655443333221000 0000 01
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
...++.+.++|.+||..+|.+||++.++++||||.+...
T Consensus 270 ~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 270 IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred CCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 135788999999999999999999999999999987543
No 288
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.93 E-value=7.7e-26 Score=224.58 Aligned_cols=162 Identities=39% Similarity=0.781 Sum_probs=134.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.+++.++.|++.||.|||+++++||||+|+||+++.++.++|+|||++..... .....+++.|+|||.+.+..
T Consensus 112 l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 187 (308)
T cd06634 112 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----ANXFVGTPYWMAPEVILAMD 187 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC----cccccCCccccCHHHHhhcc
Confidence 46788999999999999999999999999999999999999999999998865432 23456889999999985321
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
...++.++|||||||++|+|++|..||...........+.....+.. ....++..+.++|.+||..+|.+||++.++
T Consensus 188 --~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l 264 (308)
T cd06634 188 --EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL-QSGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264 (308)
T ss_pred --cCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCc-CcccccHHHHHHHHHHhhCCcccCCCHHHH
Confidence 13467899999999999999999999987766555555554433322 234678999999999999999999999999
Q ss_pred hcCcCCCCC
Q psy9090 161 LEHPFITSL 169 (488)
Q Consensus 161 l~hp~f~~~ 169 (488)
++|||+...
T Consensus 265 l~~~~~~~~ 273 (308)
T cd06634 265 LKHRFVLRE 273 (308)
T ss_pred hhCcccccc
Confidence 999999763
No 289
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93 E-value=7.5e-26 Score=217.11 Aligned_cols=160 Identities=36% Similarity=0.765 Sum_probs=131.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+..
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~ 177 (260)
T cd06606 98 LPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG 177 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcC
Confidence 46888999999999999999999999999999999999999999999999876654322 1344568899999999876
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH-PTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||||+++|+|++|..||.... .......+.. .......+..++..++++|.+||..+|.+||++
T Consensus 178 -----~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~ 251 (260)
T cd06606 178 -----EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTA 251 (260)
T ss_pred -----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCH
Confidence 447889999999999999999999997765 2222222222 112222355678999999999999999999999
Q ss_pred HHHhcCcCC
Q psy9090 158 SELLEHPFI 166 (488)
Q Consensus 158 ~ell~hp~f 166 (488)
.+++.||||
T Consensus 252 ~~ll~~~~~ 260 (260)
T cd06606 252 DELLQHPFL 260 (260)
T ss_pred HHHhhCCCC
Confidence 999999997
No 290
>KOG0197|consensus
Probab=99.93 E-value=4.5e-26 Score=228.11 Aligned_cols=153 Identities=27% Similarity=0.462 Sum_probs=131.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc-cccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK-KKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~ 80 (488)
+-.+...++.||++|++||+++++|||||...||||+++..+||+|||+++......-. .....-...|.|||++..
T Consensus 301 ~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~-- 378 (468)
T KOG0197|consen 301 NLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNY-- 378 (468)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhh--
Confidence 45678899999999999999999999999999999999999999999999954432111 111122457999999986
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|||||||+|+||+| |+.||.+++..+.+..+-++..- +.|..+|+++.++|..||..+|++|||++.
T Consensus 379 ---~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl--p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 379 ---GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL--PRPEGCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred ---CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC--CCCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 679999999999999999998 99999999999988888887643 467789999999999999999999999987
Q ss_pred Hh
Q psy9090 160 LL 161 (488)
Q Consensus 160 ll 161 (488)
+.
T Consensus 454 L~ 455 (468)
T KOG0197|consen 454 LR 455 (468)
T ss_pred HH
Confidence 65
No 291
>KOG2345|consensus
Probab=99.93 E-value=1.4e-26 Score=210.37 Aligned_cols=161 Identities=27% Similarity=0.455 Sum_probs=124.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCCEEEccCCcEEEEecCCccccccccCc---------cccccCCCc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENH--VIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK---------KKTFLGSPS 69 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~---------~~~~~gt~~ 69 (488)
+||.++..|+.+|.+||.+||+.. .+||||||.|||+.+.+.++|.|||.++...-.... ...-..|..
T Consensus 124 ~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~p 203 (302)
T KOG2345|consen 124 VSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIP 203 (302)
T ss_pred cCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCc
Confidence 589999999999999999999999 999999999999999999999999998754321110 112246889
Q ss_pred cccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHH-HHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcc
Q psy9090 70 WMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTR-ALFQIVRNPPPGLYRASNWSQHYVDFIAECLE 148 (488)
Q Consensus 70 y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~ 148 (488)
|+|||.+..... ...++++|||||||++|.|+.|..||....... .+.-.+.+.....+....+|+.+.++|+.||+
T Consensus 204 yRAPELf~vk~~--~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlq 281 (302)
T KOG2345|consen 204 YRAPELFNVKSH--CTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQ 281 (302)
T ss_pred ccCchheecccC--cccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhc
Confidence 999999876322 456889999999999999999999995321100 00001122233344455689999999999999
Q ss_pred cCCCCCCCHHHHhcC
Q psy9090 149 KNPEHRPYMSELLEH 163 (488)
Q Consensus 149 ~dP~~Rps~~ell~h 163 (488)
.||.+||++.+++.+
T Consensus 282 vdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 282 VDPNQRPTIPELLSK 296 (302)
T ss_pred CCcccCCCHHHHHHH
Confidence 999999999999864
No 292
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.93 E-value=9.6e-26 Score=221.86 Aligned_cols=155 Identities=27% Similarity=0.471 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||++....... .......+++.|+|||.+.+
T Consensus 120 ~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 199 (291)
T cd05094 120 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 199 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc
Confidence 4678899999999999999999999999999999999999999999999987543321 11233456788999999876
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |..||...........+.....+. .+..++..+.+++.+||..+|++|||+
T Consensus 200 -----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~ 272 (291)
T cd05094 200 -----RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLE--RPRVCPKEVYDIMLGCWQREPQQRLNI 272 (291)
T ss_pred -----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCC--CCccCCHHHHHHHHHHcccChhhCcCH
Confidence 567889999999999999998 999998877666555544433322 234568899999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 273 ~~v~~ 277 (291)
T cd05094 273 KEIYK 277 (291)
T ss_pred HHHHH
Confidence 99875
No 293
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.93 E-value=5.6e-26 Score=223.26 Aligned_cols=170 Identities=31% Similarity=0.511 Sum_probs=134.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||.|||+.|++||||+|+|||++.++.++|+|||++....... .......|+..|+|||.+...
T Consensus 102 l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 181 (290)
T cd05613 102 FKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGG 181 (290)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCC
Confidence 4678899999999999999999999999999999999999999999999987653321 122345688999999998642
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH---HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT---RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP- 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp- 155 (488)
...++.++|+||+|+++|+|++|..||...... ..+........++ .+..+++.+.+++.+||..+|++||
T Consensus 182 ---~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 182 ---DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP--YPQEMSALAKDIIQRLLMKDPKKRLG 256 (290)
T ss_pred ---CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC--CCccCCHHHHHHHHHHhcCCHHHhcC
Confidence 134678899999999999999999999643221 1122222222221 2455789999999999999999997
Q ss_pred ----CHHHHhcCcCCCCCCCCccc
Q psy9090 156 ----YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 ----s~~ell~hp~f~~~~~~~~~ 175 (488)
++++++.||||....|+.+.
T Consensus 257 ~~~~~~~~l~~~~~~~~~~~~~~~ 280 (290)
T cd05613 257 CGPSDADEIKKHPFFQKINWDDLA 280 (290)
T ss_pred CCCCCHHHHHcCcccccCCHHHHh
Confidence 88999999999999886653
No 294
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93 E-value=1.5e-25 Score=215.41 Aligned_cols=157 Identities=32% Similarity=0.597 Sum_probs=133.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++++.++.++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++...... ......+++.|+|||.+.+
T Consensus 100 ~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~~-- 175 (256)
T cd08530 100 IPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--MAKTQIGTPHYMAPEVWKG-- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--CcccccCCccccCHHHHCC--
Confidence 467889999999999999999999999999999999999999999999998765443 2233568889999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+|+++|+|++|+.||...........+.....+.. +..++.++++++.+||..+|++||++.++
T Consensus 176 ---~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~ 250 (256)
T cd08530 176 ---RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPI--PPIYSQDLQNFIRSMLQVKPKLRPNCDKI 250 (256)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC--chhhCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 5678899999999999999999999988776555555544433332 34678999999999999999999999999
Q ss_pred hcCcCC
Q psy9090 161 LEHPFI 166 (488)
Q Consensus 161 l~hp~f 166 (488)
++||++
T Consensus 251 l~~p~~ 256 (256)
T cd08530 251 LASPAV 256 (256)
T ss_pred hcCCCC
Confidence 999974
No 295
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.93 E-value=8.1e-26 Score=227.27 Aligned_cols=166 Identities=29% Similarity=0.493 Sum_probs=130.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-----CccccccCCCccccchh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-----DKKKTFLGSPSWMAPEI 75 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-----~~~~~~~gt~~y~aPE~ 75 (488)
+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... .......|++.|+|||.
T Consensus 104 ~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 183 (337)
T cd07852 104 LEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEI 183 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCcee
Confidence 4567888999999999999999999999999999999999999999999987553321 12233468899999998
Q ss_pred hcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC----------------------------CC
Q psy9090 76 MRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP----------------------------PP 127 (488)
Q Consensus 76 l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~----------------------------~~ 127 (488)
+.+. ..++.++|+||+|+++|+|++|++||.+........++.... .+
T Consensus 184 ~~~~----~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (337)
T cd07852 184 LLGS----TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKP 259 (337)
T ss_pred eecc----ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccc
Confidence 7642 457789999999999999999999998765444333221110 00
Q ss_pred CCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 128 GLYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 128 ~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
.......++.++.++|.+||..+|++|||+.++++|||+..+.
T Consensus 260 ~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 260 LDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred hhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 0001123688999999999999999999999999999998764
No 296
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.93 E-value=1.2e-25 Score=219.68 Aligned_cols=155 Identities=26% Similarity=0.399 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc--cccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK--KKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~l~~ 78 (488)
+++.++..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++........ .....+++.|+|||.+.+
T Consensus 106 ~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 185 (279)
T cd05109 106 IGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILH 185 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhcc
Confidence 477889999999999999999999999999999999999999999999998765432111 112234678999999865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|+|++ |..||...........+.....+ ..+..++..+.+++.+||..||++||++
T Consensus 186 -----~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rp~~ 258 (279)
T cd05109 186 -----RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL--PQPPICTIDVYMIMVKCWMIDSECRPRF 258 (279)
T ss_pred -----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC--CCCccCCHHHHHHHHHHcCCChhhCcCH
Confidence 568899999999999999998 99999776654433333332222 2345678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.+++.
T Consensus 259 ~~l~~ 263 (279)
T cd05109 259 RELVD 263 (279)
T ss_pred HHHHH
Confidence 99985
No 297
>KOG0193|consensus
Probab=99.93 E-value=1.5e-26 Score=233.17 Aligned_cols=159 Identities=30% Similarity=0.473 Sum_probs=130.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccc--cccCccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA--NTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~--~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
.......|++||++|+.|||.++|||||||..||++.+++.|||+|||++.... ..........|...|||||+++..
T Consensus 486 dm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmq 565 (678)
T KOG0193|consen 486 DMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQ 565 (678)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhc
Confidence 456678999999999999999999999999999999999999999999986432 122334556788899999999864
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCC--CCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPP--GLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
+ ..+|++.+||||+||++|||+||..||.......+++++-++... ......+.++++++|+..||..+|++||.+
T Consensus 566 d--~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F 643 (678)
T KOG0193|consen 566 D--DNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLF 643 (678)
T ss_pred c--cCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccH
Confidence 3 478999999999999999999999999966666666665555221 122345667899999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.+||.
T Consensus 644 ~~il~ 648 (678)
T KOG0193|consen 644 PQLLS 648 (678)
T ss_pred HHHHH
Confidence 99886
No 298
>KOG1989|consensus
Probab=99.93 E-value=2e-26 Score=242.42 Aligned_cols=155 Identities=26% Similarity=0.416 Sum_probs=126.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCCEEEccCCcEEEEecCCccccccccCcc---------ccccCCCc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENH--VIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK---------KTFLGSPS 69 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~---------~~~~gt~~ 69 (488)
|+|.+|..|++|+++||.+||... |||||||-|||||..+|+.||||||.++......... -....|+.
T Consensus 141 lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~ 220 (738)
T KOG1989|consen 141 LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQ 220 (738)
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCcc
Confidence 689999999999999999999998 9999999999999999999999999986443222111 12357999
Q ss_pred cccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhccc
Q psy9090 70 WMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEK 149 (488)
Q Consensus 70 y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 149 (488)
|+|||++.-. ...+.++|+|||+|||+||-|+....||++.....+ +. ....++..++++..+++||+.||+.
T Consensus 221 YRsPEMIDly--sg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI----ln-g~Y~~P~~p~ys~~l~~LI~~mL~~ 293 (738)
T KOG1989|consen 221 YRSPEMIDLY--SGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI----LN-GNYSFPPFPNYSDRLKDLIRTMLQP 293 (738)
T ss_pred ccChHHHhhh--cCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE----Ee-ccccCCCCccHHHHHHHHHHHHhcc
Confidence 9999998542 226789999999999999999999999987643322 22 2223344568899999999999999
Q ss_pred CCCCCCCHHHHhc
Q psy9090 150 NPEHRPYMSELLE 162 (488)
Q Consensus 150 dP~~Rps~~ell~ 162 (488)
||.+||++-+++.
T Consensus 294 nP~~RPnI~Qv~~ 306 (738)
T KOG1989|consen 294 NPDERPNIYQVLE 306 (738)
T ss_pred CcccCCCHHHHHH
Confidence 9999999998875
No 299
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.93 E-value=9.1e-26 Score=219.86 Aligned_cols=158 Identities=30% Similarity=0.541 Sum_probs=131.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--------------------Cc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--------------------DK 60 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--------------------~~ 60 (488)
+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 99 l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (280)
T cd05581 99 LDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRR 178 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccc
Confidence 5788999999999999999999999999999999999999999999999987554321 12
Q ss_pred cccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHH
Q psy9090 61 KKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYV 140 (488)
Q Consensus 61 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 140 (488)
.....++..|+|||++.. ..++.++|+||||++++++++|..||...........+.... ...+..+++.+.
T Consensus 179 ~~~~~~~~~~~~Pe~~~~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 250 (280)
T cd05581 179 FASFVGTAEYVSPELLNE-----KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE---YSFPPNFPPDAK 250 (280)
T ss_pred cccccCCccccCHHHhCC-----CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC---CCCCCccCHHHH
Confidence 234467889999999875 457889999999999999999999998776544444443221 123456789999
Q ss_pred HHHHHhcccCCCCCCCH----HHHhcCcCC
Q psy9090 141 DFIAECLEKNPEHRPYM----SELLEHPFI 166 (488)
Q Consensus 141 ~li~~~L~~dP~~Rps~----~ell~hp~f 166 (488)
++|.+||..+|.+|||+ +++++||||
T Consensus 251 ~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 251 DLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 99999999999999999 999999997
No 300
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.93 E-value=1.6e-25 Score=216.83 Aligned_cols=155 Identities=24% Similarity=0.452 Sum_probs=126.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++........ ......+++.|+|||.+.+
T Consensus 101 l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 179 (263)
T cd05052 101 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY- 179 (263)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhcc-
Confidence 46778899999999999999999999999999999999999999999999876543211 1112234567999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|||||||++|+|++ |..||.+.........+.....+ ..+...+..+.+++.+||..+|++|||+.
T Consensus 180 ----~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 253 (263)
T cd05052 180 ----NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM--ERPEGCPPKVYELMRACWQWNPSDRPSFA 253 (263)
T ss_pred ----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 567889999999999999998 99999887665554444433222 23456789999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 254 ~l~~ 257 (263)
T cd05052 254 EIHQ 257 (263)
T ss_pred HHHH
Confidence 9875
No 301
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=9e-26 Score=240.42 Aligned_cols=168 Identities=17% Similarity=0.244 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-CCcEEEEecCCccccccc-cCccccccCCCccccchhhcccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-DGEVKIVDFGLSRETANT-FDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++..... ........+++.|+|||.+....
T Consensus 254 ~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~ 333 (566)
T PLN03225 254 NKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMST 333 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccC
Confidence 3457789999999999999999999999999999985 578999999999755322 12234567899999999764321
Q ss_pred cC-----------------CCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC----------CCCCC--
Q psy9090 81 KE-----------------VDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP----------PGLYR-- 131 (488)
Q Consensus 81 ~~-----------------~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~----------~~~~~-- 131 (488)
.. ...++.++||||+||++|+|+++..|+... .....+.+.... +....
T Consensus 334 ~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 411 (566)
T PLN03225 334 QTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPD 411 (566)
T ss_pred CCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchh
Confidence 11 012455779999999999999977665432 112222211100 00000
Q ss_pred -------CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 132 -------ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 132 -------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
....+...++||.+||..||.+|||+.++|+||||......
T Consensus 412 ~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 412 LRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred hhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 01113345689999999999999999999999999886554
No 302
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93 E-value=8.9e-26 Score=220.41 Aligned_cols=162 Identities=46% Similarity=0.913 Sum_probs=134.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.++.+||++|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-- 175 (277)
T cd06641 98 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ-- 175 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhcc--
Confidence 467889999999999999999999999999999999999999999999998765433222334568889999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|+||+||++|+|++|..||...........+.....+. .+..++..+.+++.+||..+|.+||++.++
T Consensus 176 ---~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 250 (277)
T cd06641 176 ---SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPT--LEGNYSKPLKEFVEACLNKEPSFRPTAKEL 250 (277)
T ss_pred ---CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCC--CCcccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 456789999999999999999999998766555444443332222 234568899999999999999999999999
Q ss_pred hcCcCCCCC
Q psy9090 161 LEHPFITSL 169 (488)
Q Consensus 161 l~hp~f~~~ 169 (488)
++||||...
T Consensus 251 l~~~~~~~~ 259 (277)
T cd06641 251 LKHKFIVRF 259 (277)
T ss_pred HhCHHHhhh
Confidence 999999764
No 303
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.93 E-value=1.1e-25 Score=222.16 Aligned_cols=162 Identities=29% Similarity=0.479 Sum_probs=128.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++........ ......+++.|+|||.+.+.
T Consensus 113 ~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 192 (302)
T cd07864 113 FSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGE 192 (302)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCC
Confidence 46889999999999999999999999999999999999999999999999876543221 11223467789999988642
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh---CCCCCC------------------------CCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR---NPPPGL------------------------YRA 132 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~---~~~~~~------------------------~~~ 132 (488)
..++.++|+||+||++|+|++|++||...........+.. .+.+.. ...
T Consensus 193 ----~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (302)
T cd07864 193 ----ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF 268 (302)
T ss_pred ----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhc
Confidence 3467899999999999999999999987665544433322 111110 011
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
..++..+.++|.+||..+|.+|||+.+++.||||
T Consensus 269 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 269 SFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 2357899999999999999999999999999997
No 304
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.93 E-value=1.1e-25 Score=220.86 Aligned_cols=177 Identities=31% Similarity=0.550 Sum_probs=136.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.|++.+|.|||+.|++||||+|+||+++.++.++|+|||++........ ......|++.|+|||.+.+.
T Consensus 102 ~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 181 (288)
T cd05583 102 FTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGG 181 (288)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCC
Confidence 46788999999999999999999999999999999999999999999999876433211 12234688999999998652
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh----HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP----TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
. ..++.++|+||+|+++|+|++|..||..... ......+.... + ..+..++..+.++|.+||..+|++||
T Consensus 182 ~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~~l~~~p~~R~ 255 (288)
T cd05583 182 S---GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK-P--PFPKTMSAEARDFIQKLLEKDPKKRL 255 (288)
T ss_pred C---CCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC-C--CCCcccCHHHHHHHHHHhcCCHhhcc
Confidence 1 2367899999999999999999999964321 22222222222 1 23455788999999999999999999
Q ss_pred C---HHHHhcCcCCCCCCCCccccccccccc
Q psy9090 156 Y---MSELLEHPFITSLPENDLHLSTVNCQY 183 (488)
Q Consensus 156 s---~~ell~hp~f~~~~~~~~~~~~~~~~~ 183 (488)
| +.++++||||+.+.|+.+......+++
T Consensus 256 t~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 286 (288)
T cd05583 256 GANGADEIKNHPFFQGIDWDDLAAKRIPAPF 286 (288)
T ss_pred CcchHHHHhcCcccccCCHHHHhhhccCCCC
Confidence 8 567799999999988766444443333
No 305
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.93 E-value=1.4e-25 Score=217.96 Aligned_cols=156 Identities=25% Similarity=0.441 Sum_probs=127.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..++.++.|++.||.|||++|++||||||+||++++++.+||+|||+++....... ......++..|+|||.+..
T Consensus 110 ~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 189 (273)
T cd05035 110 LPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD 189 (273)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhccc
Confidence 46788999999999999999999999999999999999999999999999876533211 1112234668999999865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|+|++ |.+||.+.........+.....+. .+..++..+.+++.+||..||++|||+
T Consensus 190 -----~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~ 262 (273)
T cd05035 190 -----RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK--QPEDCLDELYDLMYSCWRADPKDRPTF 262 (273)
T ss_pred -----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--CCcCCCHHHHHHHHHHcCCChhhCcCH
Confidence 567889999999999999999 999998877666555554443322 355779999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++.+
T Consensus 263 ~e~~~~ 268 (273)
T cd05035 263 TKLREV 268 (273)
T ss_pred HHHHHH
Confidence 999864
No 306
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.93 E-value=2.3e-25 Score=222.04 Aligned_cols=163 Identities=40% Similarity=0.811 Sum_probs=135.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++..... .....|++.|+|||.+....
T Consensus 122 l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 197 (317)
T cd06635 122 LQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----ANSFVGTPYWMAPEVILAMD 197 (317)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC----cccccCCccccChhhhhcCC
Confidence 46788999999999999999999999999999999999999999999998865432 23456889999999985311
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
...++.++|+||+||++|+|++|..||...........+.....+.. ....+++.++++|.+||..+|.+||++.++
T Consensus 198 --~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i 274 (317)
T cd06635 198 --EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL-QSNEWSDYFRNFVDSCLQKIPQDRPTSEEL 274 (317)
T ss_pred --CCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC-CCccccHHHHHHHHHHccCCcccCcCHHHH
Confidence 14578899999999999999999999988776666666655443322 345678999999999999999999999999
Q ss_pred hcCcCCCCCC
Q psy9090 161 LEHPFITSLP 170 (488)
Q Consensus 161 l~hp~f~~~~ 170 (488)
++|+|+....
T Consensus 275 l~~~~~~~~~ 284 (317)
T cd06635 275 LKHMFVLRER 284 (317)
T ss_pred HhChhhhccC
Confidence 9999996543
No 307
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.93 E-value=1.3e-25 Score=229.08 Aligned_cols=157 Identities=27% Similarity=0.472 Sum_probs=126.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
|+++.+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ......+++.|+|||++.+
T Consensus 211 l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 290 (375)
T cd05104 211 LDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFN 290 (375)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcC
Confidence 46788999999999999999999999999999999999999999999999876543211 1122334567999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|+|++ |..||..........+.+...... ..+...+.++++||.+||..||++|||+
T Consensus 291 -----~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~ 364 (375)
T cd05104 291 -----CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM-LSPECAPSEMYDIMKSCWDADPLKRPTF 364 (375)
T ss_pred -----CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC-CCCCCCCHHHHHHHHHHccCChhHCcCH
Confidence 568899999999999999997 899998766554455554433211 1234568899999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.++++.
T Consensus 365 ~eil~~ 370 (375)
T cd05104 365 KQIVQL 370 (375)
T ss_pred HHHHHH
Confidence 999863
No 308
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.93 E-value=1.3e-25 Score=222.35 Aligned_cols=156 Identities=24% Similarity=0.405 Sum_probs=122.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++..
T Consensus 136 ~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 214 (304)
T cd05096 136 SYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM- 214 (304)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-
Confidence 567788999999999999999999999999999999999999999999987553221 11223345788999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc--CCCCCCCCChHHHHHHHHh---CC--CCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD--GKPPFEDMHPTRALFQIVR---NP--PPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt--g~~Pf~~~~~~~~~~~~~~---~~--~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
..++.++||||||+++|+|++ +..||........+..... .. ......+..+++.+.+||.+||..+|+
T Consensus 215 ----~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 290 (304)
T cd05096 215 ----GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCR 290 (304)
T ss_pred ----CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCch
Confidence 568899999999999999985 6778877665444333221 11 111123456789999999999999999
Q ss_pred CCCCHHHHhc
Q psy9090 153 HRPYMSELLE 162 (488)
Q Consensus 153 ~Rps~~ell~ 162 (488)
+|||+.++..
T Consensus 291 ~RPs~~~i~~ 300 (304)
T cd05096 291 ERPSFSDIHA 300 (304)
T ss_pred hCcCHHHHHH
Confidence 9999999853
No 309
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.93 E-value=1.8e-25 Score=217.85 Aligned_cols=154 Identities=27% Similarity=0.492 Sum_probs=127.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||+++...... .......++..|+|||.+..
T Consensus 117 ~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 195 (277)
T cd05032 117 TLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD- 195 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc-
Confidence 567889999999999999999999999999999999999999999999987553321 12233456788999999865
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+|||||++|++++ |.+||.+.........+.....+ ..+..++..+.+++.+||..+|++|||+.
T Consensus 196 ----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 269 (277)
T cd05032 196 ----GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL--DLPENCPDKLLELMRMCWQYNPKMRPTFL 269 (277)
T ss_pred ----CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 567889999999999999998 99999887766655555433222 23556799999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 270 ~l~~ 273 (277)
T cd05032 270 EIVS 273 (277)
T ss_pred HHHH
Confidence 9986
No 310
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.93 E-value=2.2e-25 Score=215.00 Aligned_cols=155 Identities=28% Similarity=0.495 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc---ccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK---KTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~---~~~~gt~~y~aPE~l~ 77 (488)
+++..+..++.|++.||+|||.++++||||||+||+++.++.+||+|||+++......... ....++..|+|||.+.
T Consensus 92 ~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 171 (257)
T cd05060 92 IPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECIN 171 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhc
Confidence 4688999999999999999999999999999999999999999999999987654332211 1112346799999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
+ ..++.++|+||||+++|+|++ |.+||...........+..... ...+..++..++++|.+||..+|.+||+
T Consensus 172 ~-----~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp~ 244 (257)
T cd05060 172 Y-----GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER--LPRPEECPQEIYSIMLSCWKYRPEDRPT 244 (257)
T ss_pred C-----CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence 5 568889999999999999998 9999988776555444443322 2345667899999999999999999999
Q ss_pred HHHHhc
Q psy9090 157 MSELLE 162 (488)
Q Consensus 157 ~~ell~ 162 (488)
+.++++
T Consensus 245 ~~~l~~ 250 (257)
T cd05060 245 FSELES 250 (257)
T ss_pred HHHHHH
Confidence 999875
No 311
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.93 E-value=1.5e-25 Score=218.62 Aligned_cols=155 Identities=27% Similarity=0.493 Sum_probs=125.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~~ 79 (488)
+...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++....... ......+++.|+|||.+.+
T Consensus 117 ~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 195 (277)
T cd05062 117 SLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD- 195 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc-
Confidence 4567888999999999999999999999999999999999999999999875432211 1122345778999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+|||||++|+|++ |..||.+.........+.....+. .+...+..+.+++.+||..+|++|||+.
T Consensus 196 ----~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~ 269 (277)
T cd05062 196 ----GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLD--KPDNCPDMLFELMRMCWQYNPKMRPSFL 269 (277)
T ss_pred ----CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 567889999999999999998 789998877655554444433222 3456788999999999999999999999
Q ss_pred HHhcC
Q psy9090 159 ELLEH 163 (488)
Q Consensus 159 ell~h 163 (488)
+++++
T Consensus 270 e~l~~ 274 (277)
T cd05062 270 EIISS 274 (277)
T ss_pred HHHHH
Confidence 99864
No 312
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.93 E-value=2.7e-25 Score=217.25 Aligned_cols=161 Identities=32% Similarity=0.552 Sum_probs=128.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++.++..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++...... .......++..|+|||++...
T Consensus 96 ~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~- 173 (283)
T cd07830 96 FSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR-PPYTDYVSTRWYRAPEILLRS- 173 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-CCcCCCCCcccccCceeeecC-
Confidence 467899999999999999999999999999999999999999999999998765432 223345688899999988642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC---CCC------------------CCC------CCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN---PPP------------------GLY------RAS 133 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~---~~~------------------~~~------~~~ 133 (488)
..++.++|+||+|+++++|++|.+||..........++... +.. ... ...
T Consensus 174 ---~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (283)
T cd07830 174 ---TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIP 250 (283)
T ss_pred ---cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcc
Confidence 45788999999999999999999999876654444333210 000 000 011
Q ss_pred CcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 134 NWSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 134 ~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
..+..+.++|.+||..+|++|||+++++.||||
T Consensus 251 ~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 251 NASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 226789999999999999999999999999997
No 313
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93 E-value=6.8e-26 Score=227.00 Aligned_cols=168 Identities=33% Similarity=0.609 Sum_probs=126.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc-------cccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK-------KKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-------~~~~~gt~~y~aP 73 (488)
+++..++.++.||+.||+|||++|++||||||+||+++.++.++++||+.+......... .....++..|+||
T Consensus 98 ~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 177 (328)
T cd08226 98 MSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSP 177 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccCh
Confidence 467889999999999999999999999999999999999999999999754322111010 0112345679999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCC-------------------------
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPG------------------------- 128 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~------------------------- 128 (488)
|++.+. ...++.++|+||+||++|+|++|.+||...................
T Consensus 178 E~~~~~---~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (328)
T cd08226 178 ELLRQD---LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGI 254 (328)
T ss_pred hhhcCC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccc
Confidence 998752 1347889999999999999999999998765544443333221100
Q ss_pred -------------------CCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 129 -------------------LYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 129 -------------------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
......+++.+.+||++||..||++|||+.++++||||+.+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 255 GESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred ccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence 0011234677899999999999999999999999999976543
No 314
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.93 E-value=2e-25 Score=216.23 Aligned_cols=159 Identities=31% Similarity=0.653 Sum_probs=131.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc---CccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---DKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~l~ 77 (488)
+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||+++...... .......++..|+|||.+.
T Consensus 103 l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 182 (264)
T cd06653 103 LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVIS 182 (264)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhc
Confidence 4678889999999999999999999999999999999999999999999987653211 1122356889999999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
+ ..++.++|+|||||++|+|++|..||..........++...+.. ...+..+++.+.++|.+||. +|..||++
T Consensus 183 ~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~i~~~l~-~~~~r~~~ 255 (264)
T cd06653 183 G-----EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTK-PMLPDGVSDACRDFLKQIFV-EEKRRPTA 255 (264)
T ss_pred C-----CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCC-CCCCcccCHHHHHHHHHHhc-CcccCccH
Confidence 5 45788999999999999999999999887666655555543322 22456788999999999999 57999999
Q ss_pred HHHhcCcCC
Q psy9090 158 SELLEHPFI 166 (488)
Q Consensus 158 ~ell~hp~f 166 (488)
.+++.|||.
T Consensus 256 ~~~~~~~~~ 264 (264)
T cd06653 256 EFLLRHPFV 264 (264)
T ss_pred HHHhcCCCC
Confidence 999999984
No 315
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.93 E-value=1.7e-25 Score=218.91 Aligned_cols=155 Identities=26% Similarity=0.450 Sum_probs=126.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||++....... .......+++.|+|||.+.+
T Consensus 119 l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 198 (280)
T cd05092 119 LTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY 198 (280)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc
Confidence 4678899999999999999999999999999999999999999999999986543211 11122345678999999876
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |.+||...........+...... ..+..+++.+.++|.+||..+|.+||++
T Consensus 199 -----~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~ 271 (280)
T cd05092 199 -----RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGREL--ERPRTCPPEVYAIMQGCWQREPQQRMVI 271 (280)
T ss_pred -----CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccC--CCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence 568899999999999999998 99999877766655555444322 2345678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.+++.
T Consensus 272 ~~l~~ 276 (280)
T cd05092 272 KDIHS 276 (280)
T ss_pred HHHHH
Confidence 99875
No 316
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.93 E-value=1.2e-25 Score=217.88 Aligned_cols=156 Identities=24% Similarity=0.498 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|++.|+|||.+.+
T Consensus 103 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-- 180 (267)
T cd08228 103 IPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-- 180 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhcc--
Confidence 467889999999999999999999999999999999999999999999998765443222334568899999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh--HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP--TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+|+++|+|++|..||..... ......+.....++. .....+..+.++|.+||..+|++||++.
T Consensus 181 ---~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 256 (267)
T cd08228 181 ---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL-PTEHYSEKLRELVSMCIYPDPDQRPDIG 256 (267)
T ss_pred ---CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC-ChhhcCHHHHHHHHHHCCCCcccCcCHH
Confidence 5578899999999999999999999965432 222222222222222 2335678999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 257 ~vl~ 260 (267)
T cd08228 257 YVHQ 260 (267)
T ss_pred HHHH
Confidence 9986
No 317
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93 E-value=1.3e-25 Score=226.39 Aligned_cols=164 Identities=28% Similarity=0.535 Sum_probs=131.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++...... .....+++.|+|||.+.+.
T Consensus 115 l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~- 190 (343)
T cd07880 115 LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE---MTGYVVTRWYRAPEVILNW- 190 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC---ccccccCCcccCHHHHhCC-
Confidence 578899999999999999999999999999999999999999999999998765332 2344678899999998642
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCC----------------------CCC------CCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPP----------------------PGL------YRA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~----------------------~~~------~~~ 132 (488)
..++.++|+||+|+++|++++|.+||.+.........+..... +.. ...
T Consensus 191 ---~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T cd07880 191 ---MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLL 267 (343)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhc
Confidence 3477899999999999999999999987665443333322110 000 011
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
...++.+.++|.+||..||++|||+.+++.||||+....
T Consensus 268 ~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 268 PNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred cCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 346788999999999999999999999999999987644
No 318
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93 E-value=1.4e-25 Score=219.39 Aligned_cols=162 Identities=26% Similarity=0.482 Sum_probs=129.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+.
T Consensus 97 ~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 176 (287)
T cd07840 97 FTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGA 176 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEcc
Confidence 46889999999999999999999999999999999999999999999999876544321 12334567889999987642
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC---CCCCC------------------------CC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP---PPGLY------------------------RA 132 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~---~~~~~------------------------~~ 132 (488)
..++.++|+||||+++|+|++|..||...........+.... .+..+ ..
T Consensus 177 ----~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (287)
T cd07840 177 ----TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFF 252 (287)
T ss_pred ----ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHh
Confidence 457889999999999999999999998777655444443211 00000 00
Q ss_pred CC-cCHHHHHHHHHhcccCCCCCCCHHHHhcCcCC
Q psy9090 133 SN-WSQHYVDFIAECLEKNPEHRPYMSELLEHPFI 166 (488)
Q Consensus 133 ~~-~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 166 (488)
.. .++.+.+++.+||..+|.+||++.++++||||
T Consensus 253 ~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 253 KHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11 27889999999999999999999999999997
No 319
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.93 E-value=2.3e-25 Score=215.16 Aligned_cols=155 Identities=25% Similarity=0.437 Sum_probs=126.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc---cccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK---KKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~l~ 77 (488)
+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++......... .....+++.|+|||.+.
T Consensus 92 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 171 (257)
T cd05115 92 ITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECIN 171 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHc
Confidence 578899999999999999999999999999999999999999999999998754322111 11122356899999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
. ..++.++|+|||||++|++++ |..||...........+.....+. .+...++++.++|.+||..+|++||+
T Consensus 172 ~-----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~c~~~~~~~Rp~ 244 (257)
T cd05115 172 F-----RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLD--CPAECPPEMYALMKDCWIYKWEDRPN 244 (257)
T ss_pred c-----CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 5 567889999999999999996 999998887666555554443322 34567899999999999999999999
Q ss_pred HHHHhc
Q psy9090 157 MSELLE 162 (488)
Q Consensus 157 ~~ell~ 162 (488)
+.++.+
T Consensus 245 ~~~i~~ 250 (257)
T cd05115 245 FAKVEE 250 (257)
T ss_pred HHHHHH
Confidence 999865
No 320
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.93 E-value=2e-25 Score=218.53 Aligned_cols=156 Identities=22% Similarity=0.445 Sum_probs=127.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++...... .......++..|+|||.+.+
T Consensus 121 ~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 200 (283)
T cd05090 121 LDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY 200 (283)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhcc
Confidence 3567788999999999999999999999999999999999999999999997653221 11233445678999999865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |.+||.+.........+...... ..+..+++.+++++.+||..+|++||++
T Consensus 201 -----~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~ 273 (283)
T cd05090 201 -----GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL--PCSEDCPPRMYSLMTECWQEGPSRRPRF 273 (283)
T ss_pred -----CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence 567899999999999999998 99999887665554444433322 2345678999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++++
T Consensus 274 ~~i~~~ 279 (283)
T cd05090 274 KDIHTR 279 (283)
T ss_pred HHHHHH
Confidence 999864
No 321
>KOG4236|consensus
Probab=99.93 E-value=7.2e-27 Score=231.02 Aligned_cols=161 Identities=27% Similarity=0.509 Sum_probs=134.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC---cEEEEecCCccccccccCccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG---EVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~---~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~ 77 (488)
|+|..-++++.||+.||+|||-+||+|+||||+|||+.+.. ++||||||+++.+... .-..+.+|||.|+|||+++
T Consensus 661 L~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-sFRrsVVGTPAYLaPEVLr 739 (888)
T KOG4236|consen 661 LPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-SFRRSVVGTPAYLAPEVLR 739 (888)
T ss_pred chHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh-hhhhhhcCCccccCHHHHh
Confidence 67888999999999999999999999999999999997654 5999999999988764 3456779999999999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC-CCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN-PPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
. ++|+.+-|+||+|||+|--+.|..||...... ..+|-.. -..+..+...+++++.+||..+|+..-.+|.|
T Consensus 740 n-----kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI--ndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRys 812 (888)
T KOG4236|consen 740 N-----KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI--NDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYS 812 (888)
T ss_pred h-----ccccccccceeeeEEEEEEecccccCCCccch--hHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcc
Confidence 7 78999999999999999999999999764432 2222111 11111123456899999999999999999999
Q ss_pred HHHHhcCcCCCCC
Q psy9090 157 MSELLEHPFITSL 169 (488)
Q Consensus 157 ~~ell~hp~f~~~ 169 (488)
+++.|.|||+++.
T Consensus 813 vdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 813 VDKSLSHPWLQDY 825 (888)
T ss_pred hHhhccchhhhcc
Confidence 9999999999875
No 322
>KOG0586|consensus
Probab=99.93 E-value=1.8e-26 Score=233.66 Aligned_cols=164 Identities=26% Similarity=0.449 Sum_probs=141.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+.|.+++.++.|++.|++|||+++|||||||++|||++.+..+||+|||++..+... ....+++|++.|.|||++.+.
T Consensus 152 ~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~-~~lqt~cgsppyAaPEl~~g~- 229 (596)
T KOG0586|consen 152 MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG-LMLQTFCGSPPYAAPELFNGK- 229 (596)
T ss_pred chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc-ccccccCCCCCccChHhhcCc-
Confidence 457889999999999999999999999999999999999999999999999988744 566789999999999999873
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..-++.+|+||+|+++|.|++|..||.+.+......+.+.+. +..+..++.++.++|+++|.++|.+|++++++
T Consensus 230 ---~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk---~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqi 303 (596)
T KOG0586|consen 230 ---KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK---YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQI 303 (596)
T ss_pred ---ccCCcceehhhhhhhheeeeecccccCCcccccccchheeee---ecccceeechhHHHHHHhhccCccccCCHHHh
Confidence 334679999999999999999999999887665555555432 23455679999999999999999999999999
Q ss_pred hcCcCCCCCCCC
Q psy9090 161 LEHPFITSLPEN 172 (488)
Q Consensus 161 l~hp~f~~~~~~ 172 (488)
+.|+|.......
T Consensus 304 m~~~W~n~~~~~ 315 (596)
T KOG0586|consen 304 MKDRWRNDLLEA 315 (596)
T ss_pred hhhcccchhhhh
Confidence 999999765443
No 323
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.93 E-value=2.1e-25 Score=217.77 Aligned_cols=156 Identities=26% Similarity=0.480 Sum_probs=125.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC---cEEEEecCCccccccccC--ccccccCCCccccchh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG---EVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEI 75 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~---~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~ 75 (488)
+++..+..++.||+.||+|||+++++||||||+||+++.++ .+||+|||+++....... .......++.|+|||+
T Consensus 113 ~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 192 (277)
T cd05036 113 LTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEA 192 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHH
Confidence 46788899999999999999999999999999999998765 599999999876532111 1112233567999999
Q ss_pred hcccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 76 MRCGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 76 l~~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
+.+ ..++.++|||||||++|+|++ |..||...........+...... ..+..++..+.+++.+||..+|++|
T Consensus 193 ~~~-----~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~cl~~~p~~R 265 (277)
T cd05036 193 FLD-----GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL--DPPKGCPGPVYRIMTDCWQHTPEDR 265 (277)
T ss_pred Hhc-----CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCCcccC
Confidence 975 568899999999999999996 99999887765555444433222 2345678999999999999999999
Q ss_pred CCHHHHhcC
Q psy9090 155 PYMSELLEH 163 (488)
Q Consensus 155 ps~~ell~h 163 (488)
||+.++++|
T Consensus 266 ps~~~vl~~ 274 (277)
T cd05036 266 PNFATILER 274 (277)
T ss_pred cCHHHHHHH
Confidence 999999986
No 324
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=4.8e-26 Score=253.53 Aligned_cols=160 Identities=19% Similarity=0.190 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCc-------------------EEEEecCCcccccccc---
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGE-------------------VKIVDFGLSRETANTF--- 58 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~-------------------vkL~Dfg~a~~~~~~~--- 58 (488)
|++.+++.+++||+.||+|||++||+||||||+|||++..|. +|++|||+++......
T Consensus 77 ~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~ 156 (793)
T PLN00181 77 VDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERR 156 (793)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccc
Confidence 578899999999999999999999999999999999965444 5555555554321000
Q ss_pred -------------CccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC
Q psy9090 59 -------------DKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP 125 (488)
Q Consensus 59 -------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 125 (488)
.......||+.|+|||++.+ ..|+.++|||||||++|||++|.+|+..... ....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~ 229 (793)
T PLN00181 157 IEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG-----SSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRV 229 (793)
T ss_pred hhhhhccccCCCcccccccCCCcceEChhhhcc-----CCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhh
Confidence 00112358899999999876 6689999999999999999999998764321 222222222
Q ss_pred CCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 126 PPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 126 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
.++.. ....+...+++.+||.++|.+||++.++++||||...
T Consensus 230 ~~~~~--~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 230 LPPQI--LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred cChhh--hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 12111 1124566789999999999999999999999999864
No 325
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.93 E-value=2e-25 Score=222.40 Aligned_cols=156 Identities=26% Similarity=0.419 Sum_probs=125.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc--cccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK--KKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .....++..|+|||.+..
T Consensus 106 ~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~ 185 (316)
T cd05108 106 IGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILH 185 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhcc
Confidence 356788899999999999999999999999999999999999999999999865432111 112234568999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|+|++ |..||.+...... ..+..... ..+.+..++..+.+++.+||..+|.+||++
T Consensus 186 -----~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~ 258 (316)
T cd05108 186 -----RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGE-RLPQPPICTIDVYMIMVKCWMIDADSRPKF 258 (316)
T ss_pred -----CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCC-CCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence 568899999999999999987 9999987765443 33333221 222345568899999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++.+
T Consensus 259 ~~l~~~ 264 (316)
T cd05108 259 RELIIE 264 (316)
T ss_pred HHHHHH
Confidence 999875
No 326
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93 E-value=2.3e-25 Score=214.78 Aligned_cols=152 Identities=25% Similarity=0.462 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|||++...... .....++..|+|||++..
T Consensus 99 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~-- 173 (256)
T cd05082 99 LGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALRE-- 173 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc---CCCCccceeecCHHHHcc--
Confidence 367888999999999999999999999999999999999999999999998754332 123345568999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+|||||++|+|++ |..||...........+.....+ ..+..+++.+.+++.+||..+|++|||+.+
T Consensus 174 ---~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 248 (256)
T cd05082 174 ---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM--DAPDGCPPVVYDVMKQCWHLDAATRPSFLQ 248 (256)
T ss_pred ---CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 567889999999999999997 99999877655554444433222 234567899999999999999999999999
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
+++
T Consensus 249 l~~ 251 (256)
T cd05082 249 LRE 251 (256)
T ss_pred HHH
Confidence 975
No 327
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.93 E-value=2.8e-25 Score=214.54 Aligned_cols=155 Identities=27% Similarity=0.436 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++..............++..|+|||.+..
T Consensus 101 ~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-- 178 (261)
T cd05148 101 LPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASH-- 178 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHcc--
Confidence 467788999999999999999999999999999999999999999999998765433222233445678999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+||||+++|+|++ |..||...........+.....+ ..+...++.+.++|.+||..+|.+|||+.+
T Consensus 179 ---~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 253 (261)
T cd05148 179 ---GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM--PCPAKCPQEIYKIMLECWAAEPEDRPSFKA 253 (261)
T ss_pred ---CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 567889999999999999998 89999887766555555543222 234567899999999999999999999999
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
+++
T Consensus 254 l~~ 256 (261)
T cd05148 254 LRE 256 (261)
T ss_pred HHH
Confidence 875
No 328
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.93 E-value=1.9e-25 Score=219.67 Aligned_cols=156 Identities=28% Similarity=0.481 Sum_probs=126.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....... ......++..|+|||++.+
T Consensus 129 l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 208 (293)
T cd05053 129 LTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD 208 (293)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc
Confidence 46778899999999999999999999999999999999999999999999876543211 1122234567999999865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|++++ |..||...........+.....+ ..+...+..+.+|+.+||..+|++|||+
T Consensus 209 -----~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 281 (293)
T cd05053 209 -----RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRM--EKPQNCTQELYHLMRDCWHEVPSQRPTF 281 (293)
T ss_pred -----CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence 568889999999999999997 99999887765554444443322 2345668999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++++
T Consensus 282 ~eil~~ 287 (293)
T cd05053 282 KQLVED 287 (293)
T ss_pred HHHHHH
Confidence 999874
No 329
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.93 E-value=2.1e-25 Score=216.15 Aligned_cols=156 Identities=25% Similarity=0.516 Sum_probs=124.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|++.|+|||.+.+
T Consensus 103 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~-- 180 (267)
T cd08229 103 IPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-- 180 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcC--
Confidence 477889999999999999999999999999999999999999999999998765433233334578899999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH--HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT--RALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+|+++|+|++|..||.+.... .....+.....++. .+...++.+++++.+||..+|++|||+.
T Consensus 181 ---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 256 (267)
T cd08229 181 ---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL-PSDHYSEELRQLVNMCINPDPEKRPDIT 256 (267)
T ss_pred ---CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCC-CcccccHHHHHHHHHhcCCCcccCCCHH
Confidence 56788999999999999999999999754322 22222222222221 2345788999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 257 ~i~~ 260 (267)
T cd08229 257 YVYD 260 (267)
T ss_pred HHHH
Confidence 8764
No 330
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.93 E-value=3.6e-25 Score=216.51 Aligned_cols=155 Identities=25% Similarity=0.400 Sum_probs=125.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++....... ......++..|+|||.+.+
T Consensus 106 ~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~ 185 (279)
T cd05111 106 LDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF 185 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhcc
Confidence 46888999999999999999999999999999999999999999999999875432211 1223456778999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|++++ |..||.+.........+..+..+ ..+...+..+.+++.+||..+|++|||+
T Consensus 186 -----~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rps~ 258 (279)
T cd05111 186 -----GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERL--AQPQICTIDVYMVMVKCWMIDENVRPTF 258 (279)
T ss_pred -----CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC--CCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 568899999999999999998 99999887654433333222222 2234567889999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 259 ~el~~ 263 (279)
T cd05111 259 KELAN 263 (279)
T ss_pred HHHHH
Confidence 99876
No 331
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.93 E-value=1.5e-25 Score=221.90 Aligned_cols=155 Identities=27% Similarity=0.447 Sum_probs=123.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+++.++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++...... .......++..|+|||.+.+
T Consensus 121 l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-- 197 (303)
T cd05088 121 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNY-- 197 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh-hhcccCCCcccccCHHHHhc--
Confidence 467889999999999999999999999999999999999999999999998643221 11112234567999998865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|||||||++|+|++ |.+||...........+...... ..+...++.+.+|+.+||..+|++||++++
T Consensus 198 ---~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 272 (303)
T cd05088 198 ---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL--EKPLNCDDEVYDLMRQCWREKPYERPSFAQ 272 (303)
T ss_pred ---cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 567889999999999999998 99999877655444433322111 123456889999999999999999999999
Q ss_pred HhcC
Q psy9090 160 LLEH 163 (488)
Q Consensus 160 ll~h 163 (488)
++.+
T Consensus 273 il~~ 276 (303)
T cd05088 273 ILVS 276 (303)
T ss_pred HHHH
Confidence 9875
No 332
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=2.9e-25 Score=215.91 Aligned_cols=154 Identities=27% Similarity=0.450 Sum_probs=123.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++++.+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++...... ........++.|+|||++..
T Consensus 109 l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~-~~~~~~~~~~~y~apE~~~~-- 185 (270)
T cd05047 109 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNY-- 185 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh-hhccCCCCccccCChHHHcc--
Confidence 467888999999999999999999999999999999999999999999998533211 11112233567999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+|||||++|+|++ |..||.+.........+...... ..+...+.++.+++.+||..+|.+|||+.+
T Consensus 186 ---~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 260 (270)
T cd05047 186 ---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL--EKPLNCDDEVYDLMRQCWREKPYERPSFAQ 260 (270)
T ss_pred ---CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCC--CCCCcCCHHHHHHHHHHcccChhhCCCHHH
Confidence 568889999999999999997 99999877665555444433222 233456889999999999999999999999
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
++.
T Consensus 261 il~ 263 (270)
T cd05047 261 ILV 263 (270)
T ss_pred HHH
Confidence 875
No 333
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93 E-value=3.8e-25 Score=213.70 Aligned_cols=155 Identities=26% Similarity=0.449 Sum_probs=126.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||++........ ......++..|+|||.+.+
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 177 (260)
T cd05070 99 LKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY- 177 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhc-
Confidence 46788999999999999999999999999999999999999999999999875433211 1122235567999999865
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||||+++|+|++ |.+||.+.........+.....+ ..+...+..+.+++.+||..+|++|||+.
T Consensus 178 ----~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 251 (260)
T cd05070 178 ----GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM--PCPQDCPISLHELMLQCWKKDPEERPTFE 251 (260)
T ss_pred ----CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC--CCCCcCCHHHHHHHHHHcccCcccCcCHH
Confidence 567889999999999999999 99999887766666655544322 23456789999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++.+
T Consensus 252 ~l~~ 255 (260)
T cd05070 252 YLQS 255 (260)
T ss_pred HHHH
Confidence 8864
No 334
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.93 E-value=3.5e-25 Score=213.73 Aligned_cols=156 Identities=27% Similarity=0.489 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc-cccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK-KKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||++|++|+||||+||+++.++.+||+|||.++........ .....++..|+|||.+.+
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~- 175 (256)
T cd05113 97 FQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLY- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhc-
Confidence 468889999999999999999999999999999999999999999999998754332111 112235567999999975
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||||+++|+|++ |..||...........+.....+ ..+...+..+++++.+||..+|.+||++.
T Consensus 176 ----~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 249 (256)
T cd05113 176 ----SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--YRPHLASEKVYAIMYSCWHEKAEERPTFQ 249 (256)
T ss_pred ----CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 568889999999999999998 99999877766555555544332 23455689999999999999999999999
Q ss_pred HHhcC
Q psy9090 159 ELLEH 163 (488)
Q Consensus 159 ell~h 163 (488)
+++.+
T Consensus 250 ~ll~~ 254 (256)
T cd05113 250 QLLSS 254 (256)
T ss_pred HHHHh
Confidence 99864
No 335
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93 E-value=4.3e-25 Score=213.41 Aligned_cols=155 Identities=26% Similarity=0.443 Sum_probs=127.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++........ ......++..|+|||.+.+
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~- 177 (260)
T cd05069 99 LKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY- 177 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc-
Confidence 35778899999999999999999999999999999999999999999999875533211 1122345678999998865
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||||+++|+|++ |..||.+........++.....+. .+...+..+++++.+||..+|.+||+++
T Consensus 178 ----~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05069 178 ----GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMP--CPQGCPESLHELMKLCWKKDPDERPTFE 251 (260)
T ss_pred ----CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--CCcccCHHHHHHHHHHccCCcccCcCHH
Confidence 567889999999999999999 999998877666666555443322 3456789999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 252 ~i~~ 255 (260)
T cd05069 252 YIQS 255 (260)
T ss_pred HHHH
Confidence 9875
No 336
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.93 E-value=3.9e-25 Score=213.21 Aligned_cols=156 Identities=25% Similarity=0.468 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc-cccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK-KKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++........ .....++..|+|||.+.+
T Consensus 97 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~- 175 (256)
T cd05059 97 LGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhcc-
Confidence 467889999999999999999999999999999999999999999999998755332111 111223457999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||||+++|+|++ |..||...........+...... ..+..+++.+.+++.+||..+|++|||+.
T Consensus 176 ----~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ 249 (256)
T cd05059 176 ----SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL--YRPKLAPTEVYTIMYSCWHEKPEDRPAFK 249 (256)
T ss_pred ----CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 568889999999999999998 89999877665555555443222 23456799999999999999999999999
Q ss_pred HHhcC
Q psy9090 159 ELLEH 163 (488)
Q Consensus 159 ell~h 163 (488)
++++.
T Consensus 250 ~~l~~ 254 (256)
T cd05059 250 KLLSQ 254 (256)
T ss_pred HHHHH
Confidence 99863
No 337
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.93 E-value=4.4e-25 Score=212.78 Aligned_cols=155 Identities=29% Similarity=0.482 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||.++....... ......++..|+|||.+.+
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 175 (256)
T cd05114 97 LSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhccc-
Confidence 46788999999999999999999999999999999999999999999999875432211 1122235568999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+|+++|+|++ |+.||...........+.....+. .+...+..+.+++.+||..+|.+|||++
T Consensus 176 ----~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~li~~c~~~~p~~Rps~~ 249 (256)
T cd05114 176 ----SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY--RPKLASMTVYEVMYSCWHEKPEGRPTFA 249 (256)
T ss_pred ----CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHccCCcccCcCHH
Confidence 567889999999999999999 999998887766666665543322 3445688999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 250 ~l~~ 253 (256)
T cd05114 250 ELLR 253 (256)
T ss_pred HHHH
Confidence 9985
No 338
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=3e-25 Score=217.46 Aligned_cols=160 Identities=35% Similarity=0.668 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.|++.+|.|||+ ++++||||+|+||+++.++.++|+|||++...... ......|+..|+|||++.+
T Consensus 100 ~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--~~~~~~~~~~~~aPE~~~~- 176 (284)
T cd06620 100 IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--IADTFVGTSTYMSPERIQG- 176 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh--ccCccccCcccCCHHHHcc-
Confidence 4678899999999999999997 69999999999999999999999999998654322 2234578999999999865
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH-----------HHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcc
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT-----------RALFQIVRNPPPGLYRASNWSQHYVDFIAECLE 148 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~-----------~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~ 148 (488)
..++.++|+||+||++|++++|..||...... .....+.....+.. ....++..+.+|+.+||.
T Consensus 177 ----~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~ 251 (284)
T cd06620 177 ----GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL-PSSDFPEDLRDFVDACLL 251 (284)
T ss_pred ----CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC-CchhcCHHHHHHHHHHhc
Confidence 46788999999999999999999999765431 22222332222221 122367899999999999
Q ss_pred cCCCCCCCHHHHhcCcCCCC
Q psy9090 149 KNPEHRPYMSELLEHPFITS 168 (488)
Q Consensus 149 ~dP~~Rps~~ell~hp~f~~ 168 (488)
.||++|||+.++++||||.+
T Consensus 252 ~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 252 KDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CCcccCcCHHHHhcCccccc
Confidence 99999999999999999965
No 339
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.93 E-value=3.9e-25 Score=214.66 Aligned_cols=155 Identities=22% Similarity=0.360 Sum_probs=126.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||++|++||||||+||+++.++.++++|||.+........ ......+++.|+|||++.+
T Consensus 104 l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 182 (266)
T cd05064 104 LVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY- 182 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhh-
Confidence 57889999999999999999999999999999999999999999999998765322111 1112335678999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++||||+||++|++++ |..||...........+...... +.+..++..+.+++.+||..+|.+||+++
T Consensus 183 ----~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~RP~~~ 256 (266)
T cd05064 183 ----HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL--PAPRNCPNLLHQLMLDCWQKERGERPRFS 256 (266)
T ss_pred ----CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHcCCCchhCCCHH
Confidence 568899999999999999764 99999888766655555444322 23567889999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 257 ~i~~ 260 (266)
T cd05064 257 QIHS 260 (266)
T ss_pred HHHH
Confidence 9875
No 340
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.93 E-value=4.1e-25 Score=213.47 Aligned_cols=155 Identities=26% Similarity=0.486 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++.++..++.|++.||+|||++|++||||||+||+++.++.++|+|||++....... .......++..|+|||++..
T Consensus 99 ~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~- 177 (260)
T cd05067 99 LTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY- 177 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhcc-
Confidence 4677889999999999999999999999999999999999999999999987654221 11223345678999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||||+++|++++ |.+||.+.........+...... ..+...+.++.+++.+||..+|++||+++
T Consensus 178 ----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05067 178 ----GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM--PRPDNCPEELYELMRLCWKEKPEERPTFE 251 (260)
T ss_pred ----CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 567889999999999999998 99999887766555555443322 23456788999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
+++.
T Consensus 252 ~l~~ 255 (260)
T cd05067 252 YLRS 255 (260)
T ss_pred HHHH
Confidence 9875
No 341
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.92 E-value=6.4e-25 Score=211.52 Aligned_cols=156 Identities=30% Similarity=0.513 Sum_probs=127.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC---ccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD---KKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~l~ 77 (488)
+++..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++........ ......++..|+|||.+.
T Consensus 94 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~ 173 (257)
T cd05040 94 FLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLR 173 (257)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhc
Confidence 46788999999999999999999999999999999999999999999999876543211 112345677899999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
+ ..++.++|+|||||++|+|++ |..||......+....+.... .....+...+..+.+++.+||..+|++|||
T Consensus 174 ~-----~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 247 (257)
T cd05040 174 T-----RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-ERLERPEACPQDIYNVMLQCWAHNPADRPT 247 (257)
T ss_pred c-----cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-CcCCCCccCCHHHHHHHHHHCCCCcccCCC
Confidence 5 568889999999999999998 999998777666555544322 222234557899999999999999999999
Q ss_pred HHHHhc
Q psy9090 157 MSELLE 162 (488)
Q Consensus 157 ~~ell~ 162 (488)
+.++++
T Consensus 248 ~~~~~~ 253 (257)
T cd05040 248 FAALRE 253 (257)
T ss_pred HHHHHH
Confidence 999976
No 342
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.92 E-value=4.7e-25 Score=211.95 Aligned_cols=155 Identities=26% Similarity=0.447 Sum_probs=123.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc--ccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK--KTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~l~~ 78 (488)
+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......... ....++..|+|||.+.+
T Consensus 91 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 170 (252)
T cd05084 91 LKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNY 170 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcC
Confidence 4678899999999999999999999999999999999999999999999987543211110 11122456999999876
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||||+++|+|++ |..||...........+...... ..+..++..+.+++.+||..+|++|||+
T Consensus 171 -----~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 243 (252)
T cd05084 171 -----GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL--PCPELCPDAVYRLMERCWEYDPGQRPSF 243 (252)
T ss_pred -----CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC--CCcccCCHHHHHHHHHHcCCChhhCcCH
Confidence 567889999999999999997 99999776655444444333222 2345678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 244 ~~~~~ 248 (252)
T cd05084 244 STVHQ 248 (252)
T ss_pred HHHHH
Confidence 99874
No 343
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.92 E-value=5.1e-25 Score=212.85 Aligned_cols=155 Identities=27% Similarity=0.458 Sum_probs=126.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||+++++||||||+||+++.++.++|+|||++........ ......++..|+|||.+..
T Consensus 100 ~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 178 (261)
T cd05072 100 VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF- 178 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhcc-
Confidence 35677889999999999999999999999999999999999999999999976543211 1122345678999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+|||||++|+|++ |..||...........+...... +....++..+.+++.+||..+|++||+++
T Consensus 179 ----~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 252 (261)
T cd05072 179 ----GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM--PRMENCPDELYDIMKTCWKEKAEERPTFD 252 (261)
T ss_pred ----CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHccCCcccCcCHH
Confidence 567889999999999999998 99999887766655555443322 23346789999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 253 ~i~~ 256 (261)
T cd05072 253 YLQS 256 (261)
T ss_pred HHHH
Confidence 9865
No 344
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.92 E-value=5e-25 Score=216.56 Aligned_cols=155 Identities=27% Similarity=0.473 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++....... ......++..|+|||.+.+
T Consensus 124 l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~ 203 (290)
T cd05045 124 LTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD 203 (290)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc
Confidence 45778899999999999999999999999999999999999999999999875432211 1122345678999999865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||||+++|+|++ |..||.+..+............. ..+..++..+.+++.+||..+|++||++
T Consensus 204 -----~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~cl~~~P~~Rp~~ 276 (290)
T cd05045 204 -----HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRM--ERPENCSEEMYNLMLTCWKQEPDKRPTF 276 (290)
T ss_pred -----CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC--CCCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 567889999999999999998 99999887765544443332222 2345678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 277 ~~i~~ 281 (290)
T cd05045 277 ADISK 281 (290)
T ss_pred HHHHH
Confidence 99875
No 345
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.92 E-value=5e-25 Score=213.63 Aligned_cols=156 Identities=25% Similarity=0.445 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc--cccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK--KKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++........ .....+++.|+|||.+.+
T Consensus 103 ~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~ 182 (266)
T cd05033 103 FTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY 182 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhcc
Confidence 467889999999999999999999999999999999999999999999999876421111 112234578999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||||+++|+|++ |..||...........+...... +.+..+++.+.+++.+||..+|++||++
T Consensus 183 -----~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~ 255 (266)
T cd05033 183 -----RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL--PPPMDCPSALYQLMLDCWQKDRNERPTF 255 (266)
T ss_pred -----CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 567889999999999999998 99999877766655555443222 2345678999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++++
T Consensus 256 ~ei~~~ 261 (266)
T cd05033 256 SQIVST 261 (266)
T ss_pred HHHHHH
Confidence 999864
No 346
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.92 E-value=4.8e-25 Score=217.04 Aligned_cols=157 Identities=26% Similarity=0.426 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||+++...... .......+++.|+|||.+.+
T Consensus 127 ~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 206 (296)
T cd05051 127 LSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL 206 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc
Confidence 4678899999999999999999999999999999999999999999999987543221 11233456778999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc--CCCCCCCCChHHHHHHHHhC-----CCCCCCCCCCcCHHHHHHHHHhcccCC
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD--GKPPFEDMHPTRALFQIVRN-----PPPGLYRASNWSQHYVDFIAECLEKNP 151 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt--g~~Pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~~~~~li~~~L~~dP 151 (488)
..++.++|||||||++|+|++ |..||........+...... .......+...+.++.+++.+||..+|
T Consensus 207 -----~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 281 (296)
T cd05051 207 -----GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDE 281 (296)
T ss_pred -----CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccCh
Confidence 468899999999999999987 78888776655544444321 111122344567899999999999999
Q ss_pred CCCCCHHHHhc
Q psy9090 152 EHRPYMSELLE 162 (488)
Q Consensus 152 ~~Rps~~ell~ 162 (488)
.+|||+.++++
T Consensus 282 ~~Rpt~~el~~ 292 (296)
T cd05051 282 EDRPTFREIHL 292 (296)
T ss_pred hcCCCHHHHHH
Confidence 99999999965
No 347
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.92 E-value=5.7e-25 Score=212.51 Aligned_cols=154 Identities=25% Similarity=0.456 Sum_probs=122.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc----CccccccCCCccccchhhc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF----DKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~l~ 77 (488)
++..+..++.||+.||+|||+++++||||||+|||++.++.+||+|||+++...... .......+++.|+|||.+.
T Consensus 96 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 175 (262)
T cd05058 96 TVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQ 175 (262)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhc
Confidence 456778899999999999999999999999999999999999999999987543211 1112334567899999986
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
. ..++.++|||||||++|+|++ |.+||...........+.....+. .+...++.+.+++.+||..+|++||+
T Consensus 176 ~-----~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~ 248 (262)
T cd05058 176 T-----QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLL--QPEYCPDPLYEVMLSCWHPKPEMRPT 248 (262)
T ss_pred c-----CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC--CCCcCCHHHHHHHHHHcCCChhhCCC
Confidence 5 567889999999999999999 567777766555444444332222 23456889999999999999999999
Q ss_pred HHHHhc
Q psy9090 157 MSELLE 162 (488)
Q Consensus 157 ~~ell~ 162 (488)
+.+++.
T Consensus 249 ~~~il~ 254 (262)
T cd05058 249 FSELVS 254 (262)
T ss_pred HHHHHH
Confidence 999986
No 348
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=6.6e-25 Score=218.42 Aligned_cols=155 Identities=28% Similarity=0.452 Sum_probs=124.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc--cccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK--KKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~l~~ 78 (488)
+++.++..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++........ .....+++.|+|||++.+
T Consensus 131 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 210 (314)
T cd05099 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD 210 (314)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc
Confidence 356778899999999999999999999999999999999999999999999765322111 112234467999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||||+++|+|++ |..||...........+...... ..+...+.++++++.+||..+|++|||+
T Consensus 211 -----~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~ 283 (314)
T cd05099 211 -----RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRM--DKPSNCTHELYMLMRECWHAVPTQRPTF 283 (314)
T ss_pred -----CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 568889999999999999999 89999887655544444433222 2345678899999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 284 ~~ll~ 288 (314)
T cd05099 284 KQLVE 288 (314)
T ss_pred HHHHH
Confidence 99886
No 349
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=6.6e-25 Score=217.30 Aligned_cols=156 Identities=28% Similarity=0.470 Sum_probs=126.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
++...+..++.||+.||.|||++|++||||||+||+++.++.+||+|||+++....... ......+++.|+|||++.+
T Consensus 134 ~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 213 (304)
T cd05101 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD 213 (304)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc
Confidence 35667889999999999999999999999999999999999999999999876543211 1222345678999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++||||||+++|+|++ |..||.+.........+...... ..+...+..+++|+.+||..+|.+|||+
T Consensus 214 -----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~ 286 (304)
T cd05101 214 -----RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM--DKPANCTNELYMMMRDCWHAIPSHRPTF 286 (304)
T ss_pred -----CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcccChhhCCCH
Confidence 568889999999999999998 88999887765555544433322 2345678999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.++++.
T Consensus 287 ~e~l~~ 292 (304)
T cd05101 287 KQLVED 292 (304)
T ss_pred HHHHHH
Confidence 999863
No 350
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.92 E-value=6.2e-25 Score=217.47 Aligned_cols=156 Identities=28% Similarity=0.486 Sum_probs=126.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++.++..++.||+.||.|||+++++|+||||+|||++.++.++|+|||+++....... ......+++.|+|||.+.+
T Consensus 138 l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 217 (302)
T cd05055 138 LTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN 217 (302)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc
Confidence 46889999999999999999999999999999999999999999999999875533211 1223345778999999876
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++||||+||++|+|++ |..||................... ..+...++.+.+++.+||..+|++|||+
T Consensus 218 -----~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~ 291 (302)
T cd05055 218 -----CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM-AQPEHAPAEIYDIMKTCWDADPLKRPTF 291 (302)
T ss_pred -----CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence 567889999999999999998 999998776555554544433221 2334568999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.+++.
T Consensus 292 ~ell~ 296 (302)
T cd05055 292 KQIVQ 296 (302)
T ss_pred HHHHH
Confidence 99975
No 351
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=4.7e-25 Score=218.71 Aligned_cols=156 Identities=27% Similarity=0.443 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc--cccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK--KKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~l~~ 78 (488)
++..++..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++........ .....+++.|+|||++.+
T Consensus 137 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 216 (307)
T cd05098 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD 216 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc
Confidence 356788999999999999999999999999999999999999999999998755322111 112234568999999876
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |..||.+.........+...... ..+..++.++++++.+||..+|.+|||+
T Consensus 217 -----~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 289 (307)
T cd05098 217 -----RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM--DKPSNCTNELYMMMRDCWHAVPSQRPTF 289 (307)
T ss_pred -----CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCC--CCCCcCCHHHHHHHHHHcccChhhCcCH
Confidence 567889999999999999998 89999876654433333333222 2345678999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++++
T Consensus 290 ~evl~~ 295 (307)
T cd05098 290 KQLVED 295 (307)
T ss_pred HHHHHH
Confidence 999864
No 352
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.92 E-value=8.8e-25 Score=211.68 Aligned_cols=155 Identities=26% Similarity=0.458 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.|++.||+|||+.+++||||||+||+++.++.++|+|||.++....... ......++..|+|||....
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~- 177 (262)
T cd05071 99 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY- 177 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhcc-
Confidence 46788899999999999999999999999999999999999999999999875543211 1123345678999998865
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+|||||++|+|++ |.+||.+.........+...... ..+...+..+.+++.+||..+|++||++.
T Consensus 178 ----~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~ 251 (262)
T cd05071 178 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM--PCPPECPESLHDLMCQCWRKEPEERPTFE 251 (262)
T ss_pred ----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC--CCccccCHHHHHHHHHHccCCcccCCCHH
Confidence 568899999999999999999 89999887766655555443222 22456789999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 252 ~~~~ 255 (262)
T cd05071 252 YLQA 255 (262)
T ss_pred HHHH
Confidence 9875
No 353
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.92 E-value=9.1e-25 Score=211.18 Aligned_cols=155 Identities=25% Similarity=0.462 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc-cccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK-KKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++........ ......+..|+|||.+.+
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 178 (261)
T cd05068 100 LKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALY- 178 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCcccccc-
Confidence 467889999999999999999999999999999999999999999999998765432111 111223457999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||||+++|+|++ |+.||.+.........+...... ..+..++..+.+++.+||..+|.+||++.
T Consensus 179 ----~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 252 (261)
T cd05068 179 ----NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM--PCPPGCPKELYDIMLDCWKEDPDDRPTFE 252 (261)
T ss_pred ----CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC--CCCCcCCHHHHHHHHHHhhcCcccCCCHH
Confidence 567889999999999999999 99999887766666555444322 23456789999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
+++.
T Consensus 253 ~l~~ 256 (261)
T cd05068 253 TLQW 256 (261)
T ss_pred HHHH
Confidence 9875
No 354
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.92 E-value=7.3e-25 Score=212.09 Aligned_cols=156 Identities=28% Similarity=0.543 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++..............+++.|+|||.+.+
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-- 180 (267)
T cd08224 103 IPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-- 180 (267)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhcc--
Confidence 467889999999999999999999999999999999999999999999998765433223344568899999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh--HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP--TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+||++|+|++|..||..... ......+.....++. ....++..+.++|.+||..+|++|||+.
T Consensus 181 ---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~cl~~~p~~Rp~~~ 256 (267)
T cd08224 181 ---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPL-PADHYSEELRDLVSRCINPDPEKRPDIS 256 (267)
T ss_pred ---CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCC-ChhhcCHHHHHHHHHHcCCCcccCCCHH
Confidence 5688899999999999999999999965432 122223333222222 1235788999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 257 ~il~ 260 (267)
T cd08224 257 YVLQ 260 (267)
T ss_pred HHHH
Confidence 9875
No 355
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.92 E-value=8.2e-25 Score=219.26 Aligned_cols=162 Identities=29% Similarity=0.548 Sum_probs=127.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||++..... ......+++.|+|||.+.+.
T Consensus 105 ~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~- 180 (328)
T cd07856 105 LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP---QMTGYVSTRYYRAPEIMLTW- 180 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---CcCCCcccccccCceeeecc-
Confidence 45778889999999999999999999999999999999999999999999875432 22344678899999987542
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHH---hC--------------------CC--CCC---CCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIV---RN--------------------PP--PGL---YRA 132 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~---~~--------------------~~--~~~---~~~ 132 (488)
..++.++|+||+||++|+|++|++||...........+. .. .. ... ...
T Consensus 181 ---~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (328)
T cd07856 181 ---QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKF 257 (328)
T ss_pred ---CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHc
Confidence 457889999999999999999999997765422211111 00 00 000 011
Q ss_pred CCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
..+++.+.++|++||..+|++|||+++++.||||...
T Consensus 258 ~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~ 294 (328)
T cd07856 258 KNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY 294 (328)
T ss_pred CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence 3467899999999999999999999999999999754
No 356
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.92 E-value=1e-24 Score=211.76 Aligned_cols=160 Identities=28% Similarity=0.453 Sum_probs=123.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .......+++.|+|||++...
T Consensus 98 ~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 177 (269)
T cd05042 98 QKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIR 177 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhc
Confidence 456778999999999999999999999999999999999999999999986532211 112233456789999998642
Q ss_pred cc--CCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCC---CCCCCcCHHHHHHHHHhcccCCCC
Q psy9090 80 HK--EVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGL---YRASNWSQHYVDFIAECLEKNPEH 153 (488)
Q Consensus 80 ~~--~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~ 153 (488)
.. ....++.++||||+||++|+|++ |..||.................... ..+..+++.+.+++..|+ .||++
T Consensus 178 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~ 256 (269)
T cd05042 178 GQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPET 256 (269)
T ss_pred cccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCccc
Confidence 11 12456789999999999999998 8889987776665555554432222 223467888999999998 59999
Q ss_pred CCCHHHHhc
Q psy9090 154 RPYMSELLE 162 (488)
Q Consensus 154 Rps~~ell~ 162 (488)
|||++++++
T Consensus 257 Rpt~~~v~~ 265 (269)
T cd05042 257 RPTAEEVHE 265 (269)
T ss_pred ccCHHHHHH
Confidence 999999876
No 357
>KOG1035|consensus
Probab=99.92 E-value=5.5e-25 Score=236.55 Aligned_cols=160 Identities=25% Similarity=0.450 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccc------------------cccCccccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA------------------NTFDKKKTF 64 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~------------------~~~~~~~~~ 64 (488)
...+|.+++||++||.|+|+.|||||||||.||+++.++.|||+|||+++... ......+..
T Consensus 696 ~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~ 775 (1351)
T KOG1035|consen 696 RDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQ 775 (1351)
T ss_pred hHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccc
Confidence 35789999999999999999999999999999999999999999999997511 001123566
Q ss_pred cCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCC--CCCCcCHHHHHH
Q psy9090 65 LGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLY--RASNWSQHYVDF 142 (488)
Q Consensus 65 ~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~l 142 (488)
+||..|+|||++.+... ..|+.|+||||||++++||+. ||...-........++.+.-+.+ ...+--+.-..+
T Consensus 776 VGTalYvAPEll~~~~~--~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~sl 850 (1351)
T KOG1035|consen 776 VGTALYVAPELLSDTSS--NKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASL 850 (1351)
T ss_pred cceeeeecHHHhccccc--ccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHH
Confidence 89999999999976421 469999999999999999974 46443333333333333222221 011123455789
Q ss_pred HHHhcccCCCCCCCHHHHhcCcCCC
Q psy9090 143 IAECLEKNPEHRPYMSELLEHPFIT 167 (488)
Q Consensus 143 i~~~L~~dP~~Rps~~ell~hp~f~ 167 (488)
|+.||+.||.+|||+.++|++.|+-
T Consensus 851 I~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 851 IRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHhcCCCccCCCHHHHhhccCCC
Confidence 9999999999999999999999996
No 358
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.92 E-value=1.6e-24 Score=208.37 Aligned_cols=155 Identities=30% Similarity=0.491 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccc-cccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKK-TFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~-~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||++||++|++|+||||+||+++.++.++|+|||++........... ...+++.|+|||.+.+
T Consensus 100 ~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~- 178 (258)
T smart00219 100 LSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKD- 178 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhcc-
Confidence 47889999999999999999999999999999999999999999999999876543311111 2236789999999864
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+|+++|+|++ |.+||...........+....... .+...+..+.+++.+||..+|++|||+.
T Consensus 179 ----~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rpt~~ 252 (258)
T smart00219 179 ----GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLP--KPENCPPEIYKLMLQCWAEDPEDRPTFS 252 (258)
T ss_pred ----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC--CCCcCCHHHHHHHHHHCcCChhhCcCHH
Confidence 567889999999999999998 899998776655555555443332 3445789999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 253 ~ll~ 256 (258)
T smart00219 253 ELVE 256 (258)
T ss_pred HHHh
Confidence 9986
No 359
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.92 E-value=1.8e-24 Score=207.60 Aligned_cols=155 Identities=26% Similarity=0.447 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc-cccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK-KKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.|++.+|.|||++|++||||||+||+++.++.+||+|||++......... .....+++.|+|||++.+
T Consensus 90 ~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 168 (250)
T cd05085 90 LKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNY- 168 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhcc-
Confidence 467888999999999999999999999999999999999999999999998654322111 112234567999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+|+++|++++ |..||...........+...... ..+..++..+.+++.+||..+|++||++.
T Consensus 169 ----~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 242 (250)
T cd05085 169 ----GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM--SCPQKCPDDVYKVMQRCWDYKPENRPKFS 242 (250)
T ss_pred ----CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence 557889999999999999998 99999887766555555443322 23456789999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 243 ~l~~ 246 (250)
T cd05085 243 ELQK 246 (250)
T ss_pred HHHH
Confidence 9875
No 360
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.92 E-value=1.1e-24 Score=212.78 Aligned_cols=155 Identities=27% Similarity=0.450 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
|++..++.++.||+.||+|||+++++||||||+||+++.++.+||+|||+++....... ......++..|+|||++.+
T Consensus 114 l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~ 193 (280)
T cd05043 114 LSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN 193 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc
Confidence 46788999999999999999999999999999999999999999999999875532211 1122345668999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|++++ |++||....+......+....... .+...++.+.+++.+||..+|++|||+
T Consensus 194 -----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~ 266 (280)
T cd05043 194 -----KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLA--QPINCPDELFAVMACCWALDPEERPSF 266 (280)
T ss_pred -----CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCC--CCCcCCHHHHHHHHHHcCCChhhCCCH
Confidence 567899999999999999998 999998876655444333332222 234568999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 267 ~~~~~ 271 (280)
T cd05043 267 SQLVQ 271 (280)
T ss_pred HHHHH
Confidence 99875
No 361
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.92 E-value=1.1e-24 Score=213.19 Aligned_cols=156 Identities=27% Similarity=0.434 Sum_probs=121.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc---cccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK---KKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~l~ 77 (488)
+++.+++.++.|++.||.|||++|++||||||+||+++.++.++|+|||+++........ .....++..|+|||.+.
T Consensus 104 l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~ 183 (283)
T cd05080 104 LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLK 183 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhc
Confidence 578899999999999999999999999999999999999999999999998765432111 12234566799999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHH--------------HHHHHHhCCCCCCCCCCCcCHHHHHHH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTR--------------ALFQIVRNPPPGLYRASNWSQHYVDFI 143 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~--------------~~~~~~~~~~~~~~~~~~~s~~~~~li 143 (488)
. ..++.++||||||+++|+|++|..||....... ......... .....+..++..+.+++
T Consensus 184 ~-----~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li 257 (283)
T cd05080 184 E-----NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG-MRLPCPKNCPQEVYILM 257 (283)
T ss_pred c-----cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC-CCCCCCCCCCHHHHHHH
Confidence 5 567889999999999999999999986533210 000111110 11122456789999999
Q ss_pred HHhcccCCCCCCCHHHHhc
Q psy9090 144 AECLEKNPEHRPYMSELLE 162 (488)
Q Consensus 144 ~~~L~~dP~~Rps~~ell~ 162 (488)
.+||..+|++|||++++++
T Consensus 258 ~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 258 KNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred HHHhccChhhCCCHHHHHH
Confidence 9999999999999999985
No 362
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.92 E-value=1.2e-24 Score=210.77 Aligned_cols=151 Identities=18% Similarity=0.448 Sum_probs=119.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCc-------EEEEecCCccccccccCccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGE-------VKIVDFGLSRETANTFDKKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~-------vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aP 73 (488)
+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|||++..... .....++..|+||
T Consensus 102 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~----~~~~~~~~~y~aP 177 (262)
T cd05077 102 LTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS----RQECVERIPWIAP 177 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC----cccccccccccCh
Confidence 467889999999999999999999999999999999987664 89999998865432 2234578899999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHh-cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELG-DGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~ell-tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
|.+... ..++.++|||||||++|+|+ +|..||........ ........ ......++++.+||.+||..||.
T Consensus 178 E~~~~~----~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~ 249 (262)
T cd05077 178 ECVEDS----KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEGQC---MLVTPSCKELADLMTHCMNYDPN 249 (262)
T ss_pred hhhcCC----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhcCc---cCCCCChHHHHHHHHHHcCCChh
Confidence 988632 55788999999999999997 68889876553322 22222211 12233467899999999999999
Q ss_pred CCCCHHHHhcC
Q psy9090 153 HRPYMSELLEH 163 (488)
Q Consensus 153 ~Rps~~ell~h 163 (488)
+||++.+|+++
T Consensus 250 ~Rp~~~~il~~ 260 (262)
T cd05077 250 QRPFFRAIMRD 260 (262)
T ss_pred hCcCHHHHHHh
Confidence 99999999874
No 363
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.92 E-value=1.6e-24 Score=207.92 Aligned_cols=155 Identities=26% Similarity=0.444 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc--ccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK--KTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.|++.+|.|||++|++||||||+||+++.++.++|+|||++.......... ....++..|+|||.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 169 (251)
T cd05041 90 LTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNY 169 (251)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhcc
Confidence 3677889999999999999999999999999999999999999999999987544211111 12233567999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||||+++|+|++ |..||...........+.... ....+...+..+.+++.+||..+|.+|||+
T Consensus 170 -----~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 242 (251)
T cd05041 170 -----GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY--RMPAPQLCPEEIYRLMLQCWAYDPENRPSF 242 (251)
T ss_pred -----CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHhccChhhCcCH
Confidence 567889999999999999998 899998776555444443322 222345678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 243 ~ell~ 247 (251)
T cd05041 243 SEIYN 247 (251)
T ss_pred HHHHH
Confidence 99986
No 364
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.92 E-value=1.9e-24 Score=208.18 Aligned_cols=152 Identities=25% Similarity=0.469 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||.++..... .....++..|+|||.+..
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~---~~~~~~~~~~~ape~~~~-- 173 (256)
T cd05039 99 ITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG---QDSGKLPVKWTAPEALRE-- 173 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc---cccCCCcccccCchhhcC--
Confidence 467899999999999999999999999999999999999999999999998765322 112334567999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+||||+++|++++ |..||...........+.....+ ..+..+++.+.++|.+||..+|++|||+.+
T Consensus 174 ---~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 248 (256)
T cd05039 174 ---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM--EAPEGCPPEVYKVMKDCWELDPAKRPTFKQ 248 (256)
T ss_pred ---CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC--CCccCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 567889999999999999997 99999877665554444433222 234567899999999999999999999999
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
+++
T Consensus 249 l~~ 251 (256)
T cd05039 249 LRE 251 (256)
T ss_pred HHH
Confidence 976
No 365
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.92 E-value=1.6e-24 Score=209.17 Aligned_cols=155 Identities=28% Similarity=0.493 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....... .......++..|+|||.+.+
T Consensus 100 ~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~- 178 (261)
T cd05034 100 LRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANY- 178 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhcc-
Confidence 4678889999999999999999999999999999999999999999999987654221 11122234568999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+|+++|++++ |+.||.+.........+....... .+...+..+.+++.+||..+|++||+++
T Consensus 179 ----~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~ 252 (261)
T cd05034 179 ----GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP--RPPNCPEELYDLMLQCWDKDPEERPTFE 252 (261)
T ss_pred ----CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence 567889999999999999998 999998877666666665543222 2345688999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
++++
T Consensus 253 ~l~~ 256 (261)
T cd05034 253 YLQS 256 (261)
T ss_pred HHHH
Confidence 9874
No 366
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.92 E-value=1.8e-24 Score=213.36 Aligned_cols=157 Identities=24% Similarity=0.401 Sum_probs=122.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||+|||++|++||||||+|||++.++.++|+|||+++....... ......+++.|++||+..+
T Consensus 127 ~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 206 (296)
T cd05095 127 ISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL 206 (296)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc
Confidence 35678999999999999999999999999999999999999999999999875533211 1122334678999998765
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc--CCCCCCCCChHHHHHHHHh-----CCCCCCCCCCCcCHHHHHHHHHhcccCC
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD--GKPPFEDMHPTRALFQIVR-----NPPPGLYRASNWSQHYVDFIAECLEKNP 151 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt--g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~li~~~L~~dP 151 (488)
..++.++|+|||||++|+|++ |..||.............. ......+.+..+++.+.+|+.+||..||
T Consensus 207 -----~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p 281 (296)
T cd05095 207 -----GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNA 281 (296)
T ss_pred -----CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCc
Confidence 568899999999999999998 7889976655443332211 1111122345578999999999999999
Q ss_pred CCCCCHHHHhc
Q psy9090 152 EHRPYMSELLE 162 (488)
Q Consensus 152 ~~Rps~~ell~ 162 (488)
.+||++.++++
T Consensus 282 ~~Rp~~~~i~~ 292 (296)
T cd05095 282 KERPSFQEIHA 292 (296)
T ss_pred ccCCCHHHHHH
Confidence 99999999865
No 367
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.92 E-value=1.8e-24 Score=208.29 Aligned_cols=152 Identities=24% Similarity=0.464 Sum_probs=124.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++...... ......+..|+|||.+.+
T Consensus 97 ~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~y~~pe~~~~-- 171 (254)
T cd05083 97 VSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---VDNSKLPVKWTAPEALKH-- 171 (254)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc---CCCCCCCceecCHHHhcc--
Confidence 367788999999999999999999999999999999999999999999998754322 122234568999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+||||+++|+|++ |++||...........+.....+. .+..++..+.+++.+||..+|.+||++++
T Consensus 172 ---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 246 (254)
T cd05083 172 ---KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRME--PPEGCPADVYVLMTSCWETEPKKRPSFHK 246 (254)
T ss_pred ---CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCC--CCCcCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 567889999999999999997 999998877655555444432222 24567899999999999999999999999
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
++.
T Consensus 247 l~~ 249 (254)
T cd05083 247 LRE 249 (254)
T ss_pred HHH
Confidence 875
No 368
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.92 E-value=1.8e-24 Score=214.15 Aligned_cols=156 Identities=26% Similarity=0.428 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
++++.+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++....... ......++..|+|||.+.+
T Consensus 106 ~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 185 (303)
T cd05110 106 IGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 185 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhcc
Confidence 46778899999999999999999999999999999999999999999999976543211 1122345678999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++||||||+++|+|++ |..||.+...... ..++.... ..+.+..++..+.+++.+||..+|++||++
T Consensus 186 -----~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~ 258 (303)
T cd05110 186 -----RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLEKGE-RLPQPPICTIDVYMVMVKCWMIDADSRPKF 258 (303)
T ss_pred -----CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHCCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 568899999999999999987 9999987654433 33333221 122345568899999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++..
T Consensus 259 ~~l~~~ 264 (303)
T cd05110 259 KELAAE 264 (303)
T ss_pred HHHHHH
Confidence 998764
No 369
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.92 E-value=2e-24 Score=212.02 Aligned_cols=155 Identities=27% Similarity=0.447 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++.++..++.||+.||.|||++|++||||||+||+++.++.++|+|||++....... .......+++.|+|||.+.+
T Consensus 127 l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 206 (288)
T cd05050 127 LSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY 206 (288)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc
Confidence 4577889999999999999999999999999999999999999999999987543221 11122234667999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |..||.+....+....+...... ..+...+..+.+||.+||..+|++|||+
T Consensus 207 -----~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~ 279 (288)
T cd05050 207 -----NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL--SCPDNCPLELYNLMRLCWSKLPSDRPSF 279 (288)
T ss_pred -----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence 568899999999999999997 88999877766655554433322 2345678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 280 ~el~~ 284 (288)
T cd05050 280 ASINR 284 (288)
T ss_pred HHHHH
Confidence 99875
No 370
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92 E-value=1.8e-24 Score=210.25 Aligned_cols=156 Identities=23% Similarity=0.444 Sum_probs=125.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....... ......+++.|++||.+..
T Consensus 110 l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 189 (273)
T cd05074 110 LPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD 189 (273)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhc
Confidence 46778899999999999999999999999999999999999999999999876532211 1223345678999999865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+|||||++|+|++ |.+||.+.........+...... ..+...++.+.+++.+||..+|++|||+
T Consensus 190 -----~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~Rps~ 262 (273)
T cd05074 190 -----NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL--KQPPDCLEDVYELMCQCWSPEPKCRPSF 262 (273)
T ss_pred -----CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 567889999999999999999 89999877655444444433222 2234578999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.+++.+
T Consensus 263 ~~~~~~ 268 (273)
T cd05074 263 QHLRDQ 268 (273)
T ss_pred HHHHHH
Confidence 998763
No 371
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.92 E-value=2.4e-24 Score=208.94 Aligned_cols=155 Identities=27% Similarity=0.518 Sum_probs=124.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-----cEEEEecCCcccccccc--CccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-----EVKIVDFGLSRETANTF--DKKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-----~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aP 73 (488)
+++..+..++.||+.||+|||+++++|+||||+||+++.++ .++|+|||++....... .......++..|+||
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 182 (269)
T cd05044 103 LTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAP 182 (269)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCH
Confidence 35678889999999999999999999999999999999887 89999999987543221 112233456789999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
|.+.+ ..++.++|+|||||++|+|++ |..||...........+...... ..+...+..+.++|.+||..+|.
T Consensus 183 E~~~~-----~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~ 255 (269)
T cd05044 183 ESLLD-----GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRL--QKPENCPDKIYQLMTNCWAQDPS 255 (269)
T ss_pred HHHcc-----CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCcc--CCcccchHHHHHHHHHHcCCCcc
Confidence 99976 567889999999999999998 99999877665544444332222 23456789999999999999999
Q ss_pred CCCCHHHHhc
Q psy9090 153 HRPYMSELLE 162 (488)
Q Consensus 153 ~Rps~~ell~ 162 (488)
+||+++++++
T Consensus 256 ~Rp~~~~i~~ 265 (269)
T cd05044 256 ERPTFDRIQE 265 (269)
T ss_pred cCCCHHHHHH
Confidence 9999999875
No 372
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.92 E-value=5.9e-25 Score=212.73 Aligned_cols=155 Identities=30% Similarity=0.549 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc--cCccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT--FDKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..|+.||+.||.|||+++++|++|+|+||+++.++.+||+|||++...... ............|+|||.+..
T Consensus 100 ~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 179 (259)
T PF07714_consen 100 LSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKD 179 (259)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 467889999999999999999999999999999999999999999999998765221 111223346678999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++||||||+++||+++ |..||...........+.....+. .+..++..+.++|..||..+|++|||+
T Consensus 180 -----~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~C~~~~p~~RPs~ 252 (259)
T PF07714_consen 180 -----GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP--IPDNCPKDIYSLIQQCWSHDPEKRPSF 252 (259)
T ss_dssp -----SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT--SBTTSBHHHHHHHHHHT-SSGGGS--H
T ss_pred -----ccccccccccccccccccccccccccccccccccccccccccccce--eccchhHHHHHHHHHHcCCChhhCcCH
Confidence 457899999999999999999 789998887777666665443322 355689999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 253 ~~i~~ 257 (259)
T PF07714_consen 253 QEILQ 257 (259)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 373
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.92 E-value=1.4e-24 Score=236.63 Aligned_cols=154 Identities=22% Similarity=0.315 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc------------------cCccccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT------------------FDKKKTF 64 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~------------------~~~~~~~ 64 (488)
...+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++..... .......
T Consensus 112 v~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~ 191 (932)
T PRK13184 112 VGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKI 191 (932)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCC
Confidence 4567889999999999999999999999999999999999999999998765110 0111235
Q ss_pred cCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHH
Q psy9090 65 LGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIA 144 (488)
Q Consensus 65 ~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 144 (488)
+||+.|+|||++.+ ..++.++||||+||++|+|++|..||................+........+++.+.+++.
T Consensus 192 vGT~~YmAPE~l~g-----~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~ 266 (932)
T PRK13184 192 VGTPDYMAPERLLG-----VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAM 266 (932)
T ss_pred CCCCCCCCHHHhcC-----CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHH
Confidence 79999999999876 5688999999999999999999999987554433332221111122223467899999999
Q ss_pred HhcccCCCCCCCHHHHh
Q psy9090 145 ECLEKNPEHRPYMSELL 161 (488)
Q Consensus 145 ~~L~~dP~~Rps~~ell 161 (488)
+||..||++|++..+.+
T Consensus 267 rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 267 KALAVDPAERYSSVQEL 283 (932)
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999998754433
No 374
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.92 E-value=2.9e-24 Score=203.67 Aligned_cols=160 Identities=39% Similarity=0.712 Sum_probs=131.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+++..+..++.+++.++.+||+.+++|+||+|.||+++.++.++|+|||.+...... .......++..|++||.+..
T Consensus 84 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~~pE~~~~-- 160 (244)
T smart00220 84 LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG-GLLTTFVGTPEYMAPEVLLG-- 160 (244)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccc-cccccccCCcCCCCHHHHcc--
Confidence 467889999999999999999999999999999999999999999999998766543 23345568889999999874
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCC-cCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASN-WSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+||+|++++++++|..||..........+.............. ++..+.+++.+||..+|++||++.+
T Consensus 161 ---~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 237 (244)
T smart00220 161 ---KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEE 237 (244)
T ss_pred ---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHH
Confidence 567889999999999999999999998744344444444433332222222 7899999999999999999999999
Q ss_pred HhcCcCC
Q psy9090 160 LLEHPFI 166 (488)
Q Consensus 160 ll~hp~f 166 (488)
+++||||
T Consensus 238 ~~~~~~~ 244 (244)
T smart00220 238 ALQHPFF 244 (244)
T ss_pred HhhCCCC
Confidence 9999997
No 375
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.92 E-value=2.9e-24 Score=208.70 Aligned_cols=156 Identities=24% Similarity=0.409 Sum_probs=126.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc-cccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK-KKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||+++........ .....+++.|+|||.+..
T Consensus 104 ~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 182 (270)
T cd05056 104 LDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINF- 182 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhcc-
Confidence 467889999999999999999999999999999999999999999999998755332111 112234567999998865
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||||+++|++++ |..||...........+...... ..+...+..+.++|.+||..+|.+|||+.
T Consensus 183 ----~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 256 (270)
T cd05056 183 ----RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL--PMPPNCPPTLYSLMTKCWAYDPSKRPRFT 256 (270)
T ss_pred ----CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 567889999999999999885 99999887766655555444332 23456789999999999999999999999
Q ss_pred HHhcC
Q psy9090 159 ELLEH 163 (488)
Q Consensus 159 ell~h 163 (488)
+++..
T Consensus 257 ~~~~~ 261 (270)
T cd05056 257 ELKAQ 261 (270)
T ss_pred HHHHH
Confidence 98763
No 376
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.91 E-value=3.2e-24 Score=208.06 Aligned_cols=155 Identities=25% Similarity=0.448 Sum_probs=125.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccc---cccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKK---TFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~---~~~gt~~y~aPE~l~ 77 (488)
+++.++..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++........... ....++.|+|||++.
T Consensus 104 ~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 183 (268)
T cd05063 104 FSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIA 183 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhh
Confidence 46788999999999999999999999999999999999999999999999875543211111 112345799999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
+ ..++.++|+||+||++|+|++ |..||...........+.... ..+.+...+..+.+++.+||..+|++||+
T Consensus 184 ~-----~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rp~ 256 (268)
T cd05063 184 Y-----RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF--RLPAPMDCPSAVYQLMLQCWQQDRARRPR 256 (268)
T ss_pred c-----CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 5 567889999999999999987 999998777665555554332 22234457899999999999999999999
Q ss_pred HHHHhc
Q psy9090 157 MSELLE 162 (488)
Q Consensus 157 ~~ell~ 162 (488)
+.++++
T Consensus 257 ~~~i~~ 262 (268)
T cd05063 257 FVDIVN 262 (268)
T ss_pred HHHHHH
Confidence 999975
No 377
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.91 E-value=2.4e-24 Score=216.32 Aligned_cols=155 Identities=28% Similarity=0.466 Sum_probs=125.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~~ 79 (488)
+...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++....... ......++..|+|||++.+
T Consensus 132 ~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 210 (334)
T cd05100 132 TFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD- 210 (334)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-
Confidence 4567788999999999999999999999999999999999999999999875533211 1122234567999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++||||||+++|+|++ |..||.+.........+.....+. .+...+..+.+++.+||..+|.+|||+.
T Consensus 211 ----~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~ 284 (334)
T cd05100 211 ----RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMD--KPANCTHELYMIMRECWHAVPSQRPTFK 284 (334)
T ss_pred ----CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcccChhhCcCHH
Confidence 568889999999999999998 899998877655554444332222 3456788999999999999999999999
Q ss_pred HHhcC
Q psy9090 159 ELLEH 163 (488)
Q Consensus 159 ell~h 163 (488)
+++++
T Consensus 285 ell~~ 289 (334)
T cd05100 285 QLVED 289 (334)
T ss_pred HHHHH
Confidence 99875
No 378
>KOG0668|consensus
Probab=99.91 E-value=1.3e-24 Score=195.30 Aligned_cols=165 Identities=20% Similarity=0.402 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-cEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-EVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
|+.-+++.++.|++.||.|||++||+|||+||.|++|+... .++|+|+|++....+. ......+.+..|--||.+..-
T Consensus 129 l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~-~eYnVRVASRyfKGPELLVdy 207 (338)
T KOG0668|consen 129 LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG-KEYNVRVASRYFKGPELLVDY 207 (338)
T ss_pred hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC-ceeeeeeehhhcCCchheeec
Confidence 45678999999999999999999999999999999999654 5999999999876554 344455677888999999763
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCC-CCChHHHHHHHHh----------------CCCC---------------
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFE-DMHPTRALFQIVR----------------NPPP--------------- 127 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~-~~~~~~~~~~~~~----------------~~~~--------------- 127 (488)
..|+.+-|+|||||++..|+..+.||. +.+...++.++.+ ...|
T Consensus 208 ----~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~ 283 (338)
T KOG0668|consen 208 ----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWS 283 (338)
T ss_pred ----hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHH
Confidence 668899999999999999999999984 4333444433321 0000
Q ss_pred CCCC---CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 128 GLYR---ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 128 ~~~~---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
.+.. ..-.++++.+|+.++|..|..+|+|+++++.||||..+.
T Consensus 284 ~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 284 RFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred HhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 0000 112368999999999999999999999999999998654
No 379
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.91 E-value=2.5e-24 Score=221.08 Aligned_cols=156 Identities=28% Similarity=0.508 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
|++.++..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......+++.|+|||++.+
T Consensus 234 l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 313 (400)
T cd05105 234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD 313 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC
Confidence 46788899999999999999999999999999999999999999999999875432211 1223456788999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++|+|++ |..||............+..... ...+..++..+.+++.+||..+|++||++
T Consensus 314 -----~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 387 (400)
T cd05105 314 -----NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYR-MAKPDHATQEVYDIMVKCWNSEPEKRPSF 387 (400)
T ss_pred -----CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCC-CCCCccCCHHHHHHHHHHCccCHhHCcCH
Confidence 568899999999999999996 99999876544444444333221 22345678999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++.+
T Consensus 388 ~~l~~ 392 (400)
T cd05105 388 LHLSD 392 (400)
T ss_pred HHHHH
Confidence 88865
No 380
>KOG1027|consensus
Probab=99.91 E-value=3.8e-25 Score=230.00 Aligned_cols=158 Identities=28% Similarity=0.453 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc---CC--cEEEEecCCcccccccc---CccccccCCCccccchhh
Q psy9090 5 HIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK---DG--EVKIVDFGLSRETANTF---DKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 5 ~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~---~~--~vkL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~l 76 (488)
..+.++.|+++||++||+.+||||||||.||||.. ++ .++|+|||+++++.... ....+..||-+|+|||++
T Consensus 607 ~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L 686 (903)
T KOG1027|consen 607 DPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQL 686 (903)
T ss_pred cHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHH
Confidence 34778999999999999999999999999999986 34 58999999999876442 234566899999999999
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcC-CCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDG-KPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
.. ..-+.++||+|+||++|+.++| .+||.+... .-.+|+.+...-....+.-..++.+||.+||.++|..||
T Consensus 687 ~~-----~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RP 759 (903)
T KOG1027|consen 687 RE-----DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRP 759 (903)
T ss_pred hc-----cccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCC
Confidence 86 3335589999999999998885 999987542 333444433221111111122899999999999999999
Q ss_pred CHHHHhcCcCCCCC
Q psy9090 156 YMSELLEHPFITSL 169 (488)
Q Consensus 156 s~~ell~hp~f~~~ 169 (488)
++.++|.||+|+..
T Consensus 760 sa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 760 SATDVLNHPLFWDS 773 (903)
T ss_pred CHHHHhCCCccCCh
Confidence 99999999999864
No 381
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.91 E-value=3.5e-24 Score=206.22 Aligned_cols=156 Identities=28% Similarity=0.496 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~ 79 (488)
++++.++.++.|++.+|+|||++|++||||||+||+++.++.++|+|||++........ ......++..|+|||.+.+
T Consensus 97 ~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~- 175 (256)
T cd05112 97 FSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSF- 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhcc-
Confidence 46788999999999999999999999999999999999999999999999875432211 1112234568999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||+|+++|+|++ |..||...........+...... ..+...+..+.+|+.+||..+|++|||+.
T Consensus 176 ----~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 249 (256)
T cd05112 176 ----SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRL--YKPRLASQSVYELMQHCWKERPEDRPSFS 249 (256)
T ss_pred ----CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCC--CCCCCCCHHHHHHHHHHcccChhhCCCHH
Confidence 567889999999999999998 99999877665555554433222 22445689999999999999999999999
Q ss_pred HHhcC
Q psy9090 159 ELLEH 163 (488)
Q Consensus 159 ell~h 163 (488)
+++++
T Consensus 250 ~~l~~ 254 (256)
T cd05112 250 LLLHQ 254 (256)
T ss_pred HHHHh
Confidence 99864
No 382
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.91 E-value=3.5e-24 Score=206.90 Aligned_cols=151 Identities=20% Similarity=0.416 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCc--------EEEEecCCccccccccCccccccCCCcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGE--------VKIVDFGLSRETANTFDKKKTFLGSPSWMA 72 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~--------vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~a 72 (488)
+++..+..++.||+.||+|||++||+||||||+||+++.++. ++++|||++..... .....+++.|+|
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~----~~~~~~~~~y~a 172 (258)
T cd05078 97 INISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP----KEILLERIPWVP 172 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC----chhccccCCccC
Confidence 467888999999999999999999999999999999987664 69999998765432 234567889999
Q ss_pred chhhcccccCCCCCCCccchhhhHHHHHHHhcC-CCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCC
Q psy9090 73 PEIMRCGHKEVDGYDNRIDVWALGITAIELGDG-KPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNP 151 (488)
Q Consensus 73 PE~l~~~~~~~~~~~~~~DiwslGvil~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP 151 (488)
||++.+. ..++.++|+||+|+++|+|++| .+||........ ....... . ..+...+.++.++|.+||+.+|
T Consensus 173 PE~~~~~----~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p 244 (258)
T cd05078 173 PECIENP----QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFYEDR-H--QLPAPKWTELANLINQCMDYEP 244 (258)
T ss_pred chhccCC----CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHHHcc-c--cCCCCCcHHHHHHHHHHhccCh
Confidence 9998752 3478899999999999999998 466665544332 2222221 1 1233456889999999999999
Q ss_pred CCCCCHHHHhcC
Q psy9090 152 EHRPYMSELLEH 163 (488)
Q Consensus 152 ~~Rps~~ell~h 163 (488)
++|||++++++.
T Consensus 245 ~~Rps~~~il~~ 256 (258)
T cd05078 245 DFRPSFRAIIRD 256 (258)
T ss_pred hhCCCHHHHHHh
Confidence 999999999863
No 383
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.91 E-value=3.6e-24 Score=215.92 Aligned_cols=157 Identities=28% Similarity=0.500 Sum_probs=123.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ......+++.|+|||.+.+
T Consensus 176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 255 (343)
T cd05103 176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 255 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC
Confidence 35677889999999999999999999999999999999999999999999876432211 1122345678999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||||+++|+|++ |..||............+..... ...+...++.+.+++..||..+|++|||+
T Consensus 256 -----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~cl~~~p~~Rps~ 329 (343)
T cd05103 256 -----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTF 329 (343)
T ss_pred -----CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCC-CCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence 568899999999999999996 99999775543333333322211 12234567899999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
.++++|
T Consensus 330 ~eil~~ 335 (343)
T cd05103 330 SELVEH 335 (343)
T ss_pred HHHHHH
Confidence 999875
No 384
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.91 E-value=4.1e-24 Score=210.69 Aligned_cols=156 Identities=22% Similarity=0.367 Sum_probs=121.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++....... .......+++.|+|||.+..
T Consensus 127 ~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 205 (295)
T cd05097 127 SIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL- 205 (295)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-
Confidence 567788999999999999999999999999999999999999999999987543221 11122345678999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc--CCCCCCCCChHHHHHHHHh---C--CCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD--GKPPFEDMHPTRALFQIVR---N--PPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt--g~~Pf~~~~~~~~~~~~~~---~--~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
..++.++|+|||||++|+|++ |..||........+..+.. . .......+...++.+.+|+.+||..+|+
T Consensus 206 ----~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 281 (295)
T cd05097 206 ----GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIK 281 (295)
T ss_pred ----CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCch
Confidence 568899999999999999987 7788877665544433321 1 1111122445689999999999999999
Q ss_pred CCCCHHHHhc
Q psy9090 153 HRPYMSELLE 162 (488)
Q Consensus 153 ~Rps~~ell~ 162 (488)
+|||++++++
T Consensus 282 ~RPs~~~i~~ 291 (295)
T cd05097 282 DRPTFNKIHH 291 (295)
T ss_pred hCcCHHHHHH
Confidence 9999999875
No 385
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.91 E-value=5.4e-24 Score=205.77 Aligned_cols=154 Identities=26% Similarity=0.482 Sum_probs=124.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||.+....... .......++..|+|||++..
T Consensus 100 ~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-- 177 (260)
T cd05073 100 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF-- 177 (260)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhcc--
Confidence 567788999999999999999999999999999999999999999999987553221 11122345567999999875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+|||||++|++++ |..||...........+...... ..+...+.++.+++.+||..+|++||++.+
T Consensus 178 ---~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 252 (260)
T cd05073 178 ---GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM--PRPENCPEELYNIMMRCWKNRPEERPTFEY 252 (260)
T ss_pred ---CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC--CCcccCCHHHHHHHHHHcccCcccCcCHHH
Confidence 567889999999999999998 99999887765555544443222 234567899999999999999999999998
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
++.
T Consensus 253 l~~ 255 (260)
T cd05073 253 IQS 255 (260)
T ss_pred HHH
Confidence 764
No 386
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.91 E-value=6.1e-24 Score=206.42 Aligned_cols=160 Identities=30% Similarity=0.451 Sum_probs=120.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~~ 79 (488)
++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++........ ......+++.|+|||++...
T Consensus 98 ~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 177 (269)
T cd05087 98 DPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEV 177 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccc
Confidence 3556788999999999999999999999999999999999999999999864332211 11234567889999998642
Q ss_pred ccC--CCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCC---CCCcCHHHHHHHHHhcccCCCC
Q psy9090 80 HKE--VDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYR---ASNWSQHYVDFIAECLEKNPEH 153 (488)
Q Consensus 80 ~~~--~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~ 153 (488)
... ...++.++|+||+|+++|+|++ |..||...................... ....++.+.+++.+|+ .+|++
T Consensus 178 ~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~ 256 (269)
T cd05087 178 HGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQ 256 (269)
T ss_pred cccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCccc
Confidence 111 1246789999999999999996 999998776555444333322221111 2245788999999998 68999
Q ss_pred CCCHHHHhc
Q psy9090 154 RPYMSELLE 162 (488)
Q Consensus 154 Rps~~ell~ 162 (488)
|||+++|+.
T Consensus 257 Rpt~~~l~~ 265 (269)
T cd05087 257 RPSAEEVHL 265 (269)
T ss_pred CCCHHHHHH
Confidence 999999874
No 387
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.91 E-value=4.7e-24 Score=207.02 Aligned_cols=155 Identities=24% Similarity=0.436 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc---ccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK---KTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~---~~~~gt~~y~aPE~l~ 77 (488)
+++.++..++.|++.||+|||++|++||||||+||+++.++.++|+|||++.......... ....++..|+|||.+.
T Consensus 103 ~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~ 182 (267)
T cd05066 103 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 182 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhc
Confidence 4678899999999999999999999999999999999999999999999987654321111 1122356799999997
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
+ ..++.++|+||||+++|++++ |..||...........+..... .+.+...++.+.+++.+||..+|.+||+
T Consensus 183 ~-----~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 255 (267)
T cd05066 183 Y-----RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR--LPAPMDCPAALHQLMLDCWQKDRNERPK 255 (267)
T ss_pred c-----CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc--CCCCCCCCHHHHHHHHHHcccCchhCCC
Confidence 5 568889999999999999886 9999988776555555544322 2234567899999999999999999999
Q ss_pred HHHHhc
Q psy9090 157 MSELLE 162 (488)
Q Consensus 157 ~~ell~ 162 (488)
+.++++
T Consensus 256 ~~~i~~ 261 (267)
T cd05066 256 FEQIVS 261 (267)
T ss_pred HHHHHH
Confidence 999875
No 388
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.91 E-value=6.1e-24 Score=207.56 Aligned_cols=155 Identities=27% Similarity=0.409 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc--ccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK--KTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~l~~ 78 (488)
+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++......... ....++..|+|||.+..
T Consensus 106 ~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 185 (279)
T cd05057 106 IGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH 185 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhc
Confidence 4688999999999999999999999999999999999999999999999987654321111 11223567999998865
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||+|+++|++++ |..||.+.........+.... ....+...+..+.+++.+||..+|..||++
T Consensus 186 -----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~ 258 (279)
T cd05057 186 -----RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE--RLPQPPICTIDVYMVLVKCWMIDAESRPTF 258 (279)
T ss_pred -----CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC--CCCCCCCCCHHHHHHHHHHcCCChhhCCCH
Confidence 567889999999999999998 999998877655444444332 222345578899999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
.++++
T Consensus 259 ~~l~~ 263 (279)
T cd05057 259 KELIN 263 (279)
T ss_pred HHHHH
Confidence 99875
No 389
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.91 E-value=7e-24 Score=206.07 Aligned_cols=160 Identities=23% Similarity=0.412 Sum_probs=122.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc--cCccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT--FDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++..++.++.||+.||+|||+++++||||||+|||++.++.++|+|||++...... ........+++.|+|||++...
T Consensus 97 ~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 176 (268)
T cd05086 97 QLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEF 176 (268)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccc
Confidence 34567889999999999999999999999999999999999999999987542211 1122345678899999998542
Q ss_pred cc--CCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCC---CCCCcCHHHHHHHHHhcccCCCC
Q psy9090 80 HK--EVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLY---RASNWSQHYVDFIAECLEKNPEH 153 (488)
Q Consensus 80 ~~--~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~li~~~L~~dP~~ 153 (488)
.. ....++.++|||||||++|+|++ |..||...........+......... .+..+++.+.+++..|| .+|.+
T Consensus 177 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~ 255 (268)
T cd05086 177 HGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEK 255 (268)
T ss_pred cCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCccc
Confidence 11 11346789999999999999986 67788777766655555544322211 23357889999999999 67999
Q ss_pred CCCHHHHhc
Q psy9090 154 RPYMSELLE 162 (488)
Q Consensus 154 Rps~~ell~ 162 (488)
||+++++++
T Consensus 256 Rp~~~~i~~ 264 (268)
T cd05086 256 RATAEEVHR 264 (268)
T ss_pred CCCHHHHHH
Confidence 999999875
No 390
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.91 E-value=4.1e-24 Score=207.48 Aligned_cols=156 Identities=28% Similarity=0.523 Sum_probs=128.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.|++.+|.|||+ .|++|+||+|+||+++.++.++|+|||++....... ......|+..|+|||.+.+
T Consensus 110 ~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~- 187 (269)
T cd08528 110 FTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES-KLTSVVGTILYSCPEIVKN- 187 (269)
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc-ccccccCcccCcChhhhcC-
Confidence 4678899999999999999996 789999999999999999999999999987654432 3345568899999999975
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|+||||+++|+|++|.+||...........+......+. ....+++.+.++|.+||..||++||++.+
T Consensus 188 ----~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 188 ----EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL-PEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred ----CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC-CcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 5578899999999999999999999987765554444444332221 12356899999999999999999999999
Q ss_pred HhcC
Q psy9090 160 LLEH 163 (488)
Q Consensus 160 ll~h 163 (488)
+..+
T Consensus 263 ~~~~ 266 (269)
T cd08528 263 VSAM 266 (269)
T ss_pred HHHH
Confidence 8754
No 391
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.91 E-value=4.7e-24 Score=205.50 Aligned_cols=151 Identities=20% Similarity=0.419 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-------cEEEEecCCccccccccCccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-------EVKIVDFGLSRETANTFDKKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-------~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aP 73 (488)
+++..+..++.||+.||+|||++||+||||||+||+++.++ .+||+|||++..... .....++..|+||
T Consensus 98 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~y~aP 173 (259)
T cd05037 98 VSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS----REERVERIPWIAP 173 (259)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc----ccccccCCCccCh
Confidence 46788999999999999999999999999999999999888 799999999876433 2234567789999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
|++.... ..++.++|+||+|+++|+|++ |..||................ . .+...+..+.++|.+||..+|.
T Consensus 174 E~~~~~~---~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~li~~~l~~~p~ 246 (259)
T cd05037 174 ECIRNGQ---ASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH--R--LPMPDCAELANLINQCWTYDPT 246 (259)
T ss_pred hhhcCCC---CCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC--C--CCCCCchHHHHHHHHHhccChh
Confidence 9987521 367889999999999999999 688887664332222221111 1 1222348899999999999999
Q ss_pred CCCCHHHHhc
Q psy9090 153 HRPYMSELLE 162 (488)
Q Consensus 153 ~Rps~~ell~ 162 (488)
+|||+.++++
T Consensus 247 ~Rpt~~~il~ 256 (259)
T cd05037 247 KRPSFRAILR 256 (259)
T ss_pred hCCCHHHHHH
Confidence 9999999986
No 392
>KOG0664|consensus
Probab=99.91 E-value=1.1e-24 Score=200.26 Aligned_cols=165 Identities=25% Similarity=0.466 Sum_probs=131.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc-cccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK-KKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~l~~~ 79 (488)
|+...++.+++||+.||+|||+.||.||||||.|.|+++|..+||||||+++........ ...-+-|-+|+|||++.+.
T Consensus 153 Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGa 232 (449)
T KOG0664|consen 153 LTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGA 232 (449)
T ss_pred CCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcc
Confidence 466788999999999999999999999999999999999999999999999876543222 2333567899999999984
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh-----------------------CC--CCCCCC---
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR-----------------------NP--PPGLYR--- 131 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~-----------------------~~--~~~~~~--- 131 (488)
..|+..+||||+|||+.|++..+..|....+.+.+.-+.. .. .|....
T Consensus 233 ----RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYt 308 (449)
T KOG0664|consen 233 ----RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYK 308 (449)
T ss_pred ----hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceee
Confidence 6799999999999999999999999988777666554431 11 111111
Q ss_pred ---CCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 132 ---ASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 132 ---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
+.....+...++.++|..+|.+|.+..+++.|++....
T Consensus 309 lsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 309 IASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred ecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence 11223567889999999999999999999999998653
No 393
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.91 E-value=5.5e-24 Score=208.55 Aligned_cols=157 Identities=25% Similarity=0.396 Sum_probs=120.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC---ccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD---KKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~l~ 77 (488)
+++.++..++.||+.||+|||++|++||||||+||+++.++.++|+|||+++....... ......++..|+|||++.
T Consensus 106 ~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~ 185 (284)
T cd05079 106 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLI 185 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhc
Confidence 46788999999999999999999999999999999999999999999999876543211 122345677899999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh--------------HHHHHHHHhCCCCCCCCCCCcCHHHHHHH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP--------------TRALFQIVRNPPPGLYRASNWSQHYVDFI 143 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~--------------~~~~~~~~~~~~~~~~~~~~~s~~~~~li 143 (488)
+ ..++.++|+|||||++|+|+++..|+..... ........... .....+..++..+.+|+
T Consensus 186 ~-----~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li 259 (284)
T cd05079 186 Q-----SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG-KRLPRPPNCPEEVYQLM 259 (284)
T ss_pred c-----CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC-ccCCCCCCCCHHHHHHH
Confidence 5 5678899999999999999998776532110 01111111111 11123456789999999
Q ss_pred HHhcccCCCCCCCHHHHhcC
Q psy9090 144 AECLEKNPEHRPYMSELLEH 163 (488)
Q Consensus 144 ~~~L~~dP~~Rps~~ell~h 163 (488)
.+||..+|++|||+++++++
T Consensus 260 ~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 260 RKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHccCCcccCcCHHHHHHH
Confidence 99999999999999999863
No 394
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.91 E-value=5.5e-24 Score=231.95 Aligned_cols=107 Identities=28% Similarity=0.482 Sum_probs=87.8
Q ss_pred cCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHH
Q psy9090 65 LGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIA 144 (488)
Q Consensus 65 ~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 144 (488)
+||+.|+|||++.+ ..|+.++||||+||++|+|++|++||.+.........++....+.......++..+.+++.
T Consensus 541 vGT~~Y~APE~l~~-----~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~ 615 (669)
T cd05610 541 LGTPDYLAPELLLG-----KPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIE 615 (669)
T ss_pred eeCccccCHHHcCC-----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHH
Confidence 46889999999976 5688999999999999999999999998887777766665432221122356888999999
Q ss_pred HhcccCCCCCCCHHHHhcCcCCCCCCCCcccc
Q psy9090 145 ECLEKNPEHRPYMSELLEHPFITSLPENDLHL 176 (488)
Q Consensus 145 ~~L~~dP~~Rps~~ell~hp~f~~~~~~~~~~ 176 (488)
+||..+|.+||++.++++||||..++|.....
T Consensus 616 ~lL~~dP~~R~ta~e~l~h~~~~~~~~~~~~~ 647 (669)
T cd05610 616 ILLTMDPTKRAGLKELKQHPLFHGVDWENLQN 647 (669)
T ss_pred HHcccChhHCcCHHHHHhCHhhcCCCHHHhcc
Confidence 99999999999999999999999887654443
No 395
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.91 E-value=9.1e-24 Score=205.71 Aligned_cols=157 Identities=27% Similarity=0.478 Sum_probs=126.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc-cCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT-FDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.||+.||+|||++||+||||||+||+++.++.++++|||++...... ........+++.|+|||.+.+
T Consensus 114 l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~- 192 (275)
T cd05046 114 LSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE- 192 (275)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhcc-
Confidence 468889999999999999999999999999999999999999999999998643221 112233456778999999875
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+||||+++|+|++ |..||...........+.... .....+..++..+.+++.+||..+|.+|||+.
T Consensus 193 ----~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~ 267 (275)
T cd05046 193 ----DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK-LELPVPEGCPSRLYKLMTRCWAVNPKDRPSFS 267 (275)
T ss_pred ----CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC-cCCCCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 456789999999999999998 889997766555444443222 22223456789999999999999999999999
Q ss_pred HHhcC
Q psy9090 159 ELLEH 163 (488)
Q Consensus 159 ell~h 163 (488)
+++..
T Consensus 268 ~~l~~ 272 (275)
T cd05046 268 ELVSA 272 (275)
T ss_pred HHHHH
Confidence 99864
No 396
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.91 E-value=1.1e-23 Score=204.64 Aligned_cols=155 Identities=25% Similarity=0.458 Sum_probs=123.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc---ccccc--CCCccccchh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK---KKTFL--GSPSWMAPEI 75 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~---~~~~~--gt~~y~aPE~ 75 (488)
+++.+++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++......... ..... .+..|+|||.
T Consensus 103 ~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 182 (269)
T cd05065 103 FTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA 182 (269)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhH
Confidence 467889999999999999999999999999999999999999999999988654322111 11111 1347999999
Q ss_pred hcccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 76 MRCGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 76 l~~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
+.+ ..++.++|+||+||++|++++ |..||...........+.... ..+.+..++..+.+++.+||..+|.+|
T Consensus 183 ~~~-----~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R 255 (269)
T cd05065 183 IAY-----RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY--RLPPPMDCPTALHQLMLDCWQKDRNAR 255 (269)
T ss_pred hcc-----CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC--cCCCcccCCHHHHHHHHHHcCCChhhC
Confidence 875 567889999999999999886 999998877665555543322 222345678899999999999999999
Q ss_pred CCHHHHhc
Q psy9090 155 PYMSELLE 162 (488)
Q Consensus 155 ps~~ell~ 162 (488)
|++.+++.
T Consensus 256 p~~~~i~~ 263 (269)
T cd05065 256 PKFGQIVS 263 (269)
T ss_pred cCHHHHHH
Confidence 99999875
No 397
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.90 E-value=1.4e-23 Score=215.49 Aligned_cols=157 Identities=27% Similarity=0.484 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC--ccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD--KKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~l~~ 78 (488)
|++..+..++.||+.||.|||+++++||||||+|||++.++.+||+|||+++....... ......+++.|+|||.+.+
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 315 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN 315 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC
Confidence 46678899999999999999999999999999999999999999999999875432211 1223456788999999875
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|+||+||++|+|++ |..||............+..... ...+..++..+.+++.+||..+|.+||++
T Consensus 316 -----~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~l~~li~~cl~~~P~~RPs~ 389 (401)
T cd05107 316 -----NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYR-MAKPAHASDEIYEIMQKCWEEKFEIRPDF 389 (401)
T ss_pred -----CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence 567889999999999999998 89999776555544444433221 12345678999999999999999999999
Q ss_pred HHHhcC
Q psy9090 158 SELLEH 163 (488)
Q Consensus 158 ~ell~h 163 (488)
+++++.
T Consensus 390 ~ell~~ 395 (401)
T cd05107 390 SQLVHL 395 (401)
T ss_pred HHHHHH
Confidence 999863
No 398
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.90 E-value=1.4e-23 Score=204.75 Aligned_cols=151 Identities=21% Similarity=0.460 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-------cEEEEecCCccccccccCccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-------EVKIVDFGLSRETANTFDKKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-------~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aP 73 (488)
+++..+..++.||+.||+|||++||+||||||+|||++..+ .+|++|||++..... .....+++.|+||
T Consensus 114 ~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~----~~~~~~~~~~~aP 189 (274)
T cd05076 114 VPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS----REERVERIPWIAP 189 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc----ccccccCCcccCc
Confidence 46788999999999999999999999999999999997644 389999998754322 1233577889999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHH-hcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCC
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIEL-GDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPE 152 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~el-ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 152 (488)
|.+.+. ..++.++|+|||||++|++ ++|..||....+.... ....... . .+...++.+.++|.+||..+|+
T Consensus 190 e~~~~~----~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~li~~cl~~~p~ 261 (274)
T cd05076 190 ECVPGG----NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEKKH-R--LPEPSCKELATLISQCLTYEPT 261 (274)
T ss_pred hhhcCC----CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHhcc-C--CCCCCChHHHHHHHHHcccChh
Confidence 988642 4578899999999999998 5799999876544332 2222111 1 2234567899999999999999
Q ss_pred CCCCHHHHhcC
Q psy9090 153 HRPYMSELLEH 163 (488)
Q Consensus 153 ~Rps~~ell~h 163 (488)
+|||+.+++++
T Consensus 262 ~Rps~~~il~~ 272 (274)
T cd05076 262 QRPSFRTILRD 272 (274)
T ss_pred hCcCHHHHHHh
Confidence 99999999874
No 399
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.90 E-value=1.3e-23 Score=205.76 Aligned_cols=156 Identities=24% Similarity=0.411 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc---cccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK---KKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~l~ 77 (488)
+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||++......... .....++..|+|||++.
T Consensus 105 l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 184 (284)
T cd05081 105 LDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLT 184 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhc
Confidence 467888999999999999999999999999999999999999999999998765332111 11122345699999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHH---------------HHHHHHhCCCCCCCCCCCcCHHHHHH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTR---------------ALFQIVRNPPPGLYRASNWSQHYVDF 142 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~---------------~~~~~~~~~~~~~~~~~~~s~~~~~l 142 (488)
+ ..++.++|+|||||++|+|++|..|+....... .+...+... ...+.+..++..+.+|
T Consensus 185 ~-----~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 258 (284)
T cd05081 185 E-----SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN-GRLPAPPGCPAEIYAI 258 (284)
T ss_pred c-----CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC-CcCCCCCCCCHHHHHH
Confidence 5 567889999999999999999887764332110 011111111 1122345678999999
Q ss_pred HHHhcccCCCCCCCHHHHhc
Q psy9090 143 IAECLEKNPEHRPYMSELLE 162 (488)
Q Consensus 143 i~~~L~~dP~~Rps~~ell~ 162 (488)
+.+||..+|++|||+.+++.
T Consensus 259 i~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 259 MKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHHccCChhhCCCHHHHHH
Confidence 99999999999999999976
No 400
>KOG0670|consensus
Probab=99.90 E-value=1.4e-24 Score=214.76 Aligned_cols=160 Identities=26% Similarity=0.424 Sum_probs=124.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-cEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-EVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
.-..++.|+.|++.||..|..+||+|.||||+|||++... .+||||||.|...... ......-+..|.|||++.+
T Consensus 534 ~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en--eitPYLVSRFYRaPEIiLG-- 609 (752)
T KOG0670|consen 534 HIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASEN--EITPYLVSRFYRAPEIILG-- 609 (752)
T ss_pred eehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccc--cccHHHHHHhccCcceeec--
Confidence 3457889999999999999999999999999999998654 5899999998765442 1222334568999999998
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHH--HhCCCCCC-----------------------------
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQI--VRNPPPGL----------------------------- 129 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~--~~~~~~~~----------------------------- 129 (488)
.+|+...|+||+||+||||.||+..|++.+....+.-. ++++.|..
T Consensus 610 ---~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r 686 (752)
T KOG0670|consen 610 ---LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTER 686 (752)
T ss_pred ---CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccc
Confidence 78999999999999999999999999988765443221 11111100
Q ss_pred --------CCC-----------CCc-------CHHHHHHHHHhcccCCCCCCCHHHHhcCcCCCC
Q psy9090 130 --------YRA-----------SNW-------SQHYVDFIAECLEKNPEHRPYMSELLEHPFITS 168 (488)
Q Consensus 130 --------~~~-----------~~~-------s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 168 (488)
..| ..+ -..+++|+.+||..||++|.|+.++|.||||..
T Consensus 687 ~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 687 EKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred eeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 000 011 145789999999999999999999999999974
No 401
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.90 E-value=5.5e-23 Score=214.24 Aligned_cols=167 Identities=19% Similarity=0.324 Sum_probs=120.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++..++.++.|++.+|.|||+++|+||||||+|||++.++.+||+|||++........ ......+|+.|+|||.+....
T Consensus 307 ~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~ 386 (507)
T PLN03224 307 DINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQ 386 (507)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCC
Confidence 4567889999999999999999999999999999999999999999999865433211 111223478999999986421
Q ss_pred cCCC---------------CC--CCccchhhhHHHHHHHhcCCC-CCCCCChHHHH----------HHHHhCCCCCCCCC
Q psy9090 81 KEVD---------------GY--DNRIDVWALGITAIELGDGKP-PFEDMHPTRAL----------FQIVRNPPPGLYRA 132 (488)
Q Consensus 81 ~~~~---------------~~--~~~~DiwslGvil~elltg~~-Pf~~~~~~~~~----------~~~~~~~~~~~~~~ 132 (488)
.... .| ..+.|+||+||++|+|++|.. ||......... .+............
T Consensus 387 ~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~ 466 (507)
T PLN03224 387 SCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLL 466 (507)
T ss_pred CCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccc
Confidence 1100 12 235799999999999999876 76532211110 11111122223233
Q ss_pred CCcCHHHHHHHHHhcccCC---CCCCCHHHHhcCcCCCC
Q psy9090 133 SNWSQHYVDFIAECLEKNP---EHRPYMSELLEHPFITS 168 (488)
Q Consensus 133 ~~~s~~~~~li~~~L~~dP---~~Rps~~ell~hp~f~~ 168 (488)
...++..++|+.+||..+| .+|+|++++|+||||..
T Consensus 467 d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 467 DRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred cccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 4568999999999999866 68999999999999953
No 402
>KOG1026|consensus
Probab=99.89 E-value=1.9e-23 Score=219.20 Aligned_cols=154 Identities=29% Similarity=0.526 Sum_probs=133.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc--cCccccccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT--FDKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~l~~ 78 (488)
|+..+...|+.||+.|+.||-++.+|||||-..|+||.++-.|||+|||+++..-.. ........-...|||||.+..
T Consensus 600 L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly 679 (774)
T KOG1026|consen 600 LSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY 679 (774)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc
Confidence 567889999999999999999999999999999999999999999999999865332 011111123468999999987
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..|+.++||||+||+|||+++ |..||.+....+.+..+..+.. +..|.++|.++.+||..||..+|++||++
T Consensus 680 -----~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l--L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF 752 (774)
T KOG1026|consen 680 -----GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL--LSCPENCPTEVYSLMLECWNENPKRRPSF 752 (774)
T ss_pred -----CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc--ccCCCCCCHHHHHHHHHHhhcCcccCCCH
Confidence 789999999999999999987 9999999998888888776654 56788999999999999999999999999
Q ss_pred HHHh
Q psy9090 158 SELL 161 (488)
Q Consensus 158 ~ell 161 (488)
++|-
T Consensus 753 ~eI~ 756 (774)
T KOG1026|consen 753 KEIH 756 (774)
T ss_pred HHHH
Confidence 9974
No 403
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.89 E-value=3.5e-23 Score=202.19 Aligned_cols=156 Identities=28% Similarity=0.488 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCc---cccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK---KKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~l~ 77 (488)
+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++......... .....++..|+|||.+.
T Consensus 106 ~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~ 185 (284)
T cd05038 106 INLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR 185 (284)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHc
Confidence 467788999999999999999999999999999999999999999999998765422111 11223456799999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH--------------HHHHHHHhCCCCCCCCCCCcCHHHHHHH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT--------------RALFQIVRNPPPGLYRASNWSQHYVDFI 143 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~--------------~~~~~~~~~~~~~~~~~~~~s~~~~~li 143 (488)
+ ..++.++|+||||+++|+|++|..|+...... ..+...+... .....+..++.++.+++
T Consensus 186 ~-----~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li 259 (284)
T cd05038 186 T-----SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG-ERLPRPPSCPDEVYDLM 259 (284)
T ss_pred c-----CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC-CcCCCCccCCHHHHHHH
Confidence 5 46788999999999999999999998653221 1112222221 12223445678999999
Q ss_pred HHhcccCCCCCCCHHHHhc
Q psy9090 144 AECLEKNPEHRPYMSELLE 162 (488)
Q Consensus 144 ~~~L~~dP~~Rps~~ell~ 162 (488)
.+||..+|.+|||+.++++
T Consensus 260 ~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 260 KLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHhccChhhCCCHHHHHH
Confidence 9999999999999999976
No 404
>KOG0984|consensus
Probab=99.89 E-value=2.7e-23 Score=184.15 Aligned_cols=129 Identities=37% Similarity=0.618 Sum_probs=107.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHEN-HVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
++|..+-.|+..++.||.|||++ .++|||+||+|||++..|+||+||||.+-.+.+.... +.-.|.-.|+|||.+...
T Consensus 145 ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAk-t~daGCkpYmaPEri~~e 223 (282)
T KOG0984|consen 145 IPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAK-TMDAGCKPYMAPERINPE 223 (282)
T ss_pred CchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHH-HHhcCCCccCChhhcCcc
Confidence 47888899999999999999975 7999999999999999999999999998776543221 223567789999998764
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCC-CChHHHHHHHHhCCCCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFED-MHPTRALFQIVRNPPPGLYR 131 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~-~~~~~~~~~~~~~~~~~~~~ 131 (488)
.. ...|+.++||||||+.+.||.+++.||.. .++.+++.+++..+.|.++.
T Consensus 224 ~n-~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp~ 275 (282)
T KOG0984|consen 224 LN-QKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLPA 275 (282)
T ss_pred cC-cccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCcc
Confidence 33 34799999999999999999999999964 46678888888887776643
No 405
>KOG1151|consensus
Probab=99.89 E-value=3.7e-23 Score=201.21 Aligned_cols=167 Identities=28% Similarity=0.482 Sum_probs=133.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCCEEEc---cCCcEEEEecCCccccccc-------cCccccccCCC
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENH--VIHRDLRGSNVLLT---KDGEVKIVDFGLSRETANT-------FDKKKTFLGSP 68 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~---~~~~vkL~Dfg~a~~~~~~-------~~~~~~~~gt~ 68 (488)
|+|++++.|+.||+.||.||.... |||-||||.|||+. ..|.|||+|||+++..... ....+...||-
T Consensus 565 mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTY 644 (775)
T KOG1151|consen 565 MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTY 644 (775)
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCcee
Confidence 689999999999999999999875 99999999999995 4578999999999876533 23456678999
Q ss_pred ccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHH---HHhCCCCCCCCCCCcCHHHHHHHHH
Q psy9090 69 SWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQ---IVRNPPPGLYRASNWSQHYVDFIAE 145 (488)
Q Consensus 69 ~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~li~~ 145 (488)
+|+|||++.-+.. ....+.++||||+|||+|.++.|+.||........+.+ |+....-.++..+..++++++||++
T Consensus 645 WYLPPEcFvVgke-PPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRR 723 (775)
T KOG1151|consen 645 WYLPPECFVVGKE-PPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRR 723 (775)
T ss_pred eecCcceeecCCC-CCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHH
Confidence 9999999875422 25678899999999999999999999976543222221 2222222333445679999999999
Q ss_pred hcccCCCCCCCHHHHhcCcCCCC
Q psy9090 146 CLEKNPEHRPYMSELLEHPFITS 168 (488)
Q Consensus 146 ~L~~dP~~Rps~~ell~hp~f~~ 168 (488)
||.+.-+.|..+.++..||||..
T Consensus 724 CLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 724 CLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred HHHhhhhhhhhHHHHccCccccc
Confidence 99999999999999999999963
No 406
>KOG1095|consensus
Probab=99.88 E-value=1.7e-22 Score=219.30 Aligned_cols=155 Identities=26% Similarity=0.524 Sum_probs=132.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC-ccc-cccCCCccccchhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD-KKK-TFLGSPSWMAPEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~-~~~-~~~gt~~y~aPE~l~~ 78 (488)
|+..+...++.||+.|++||+++++|||||..+|+|++....|||+|||+|+.+....- ... ...-...|||||.+..
T Consensus 799 L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d 878 (1025)
T KOG1095|consen 799 LSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD 878 (1025)
T ss_pred CCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhh
Confidence 56788999999999999999999999999999999999999999999999985432111 111 1122358999999986
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
..++.++|||||||++||++| |..||.+....+.+...+.+. .+..|..++..+.++|..||+.+|++||++
T Consensus 879 -----~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg--RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F 951 (1025)
T KOG1095|consen 879 -----GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG--RLDPPSYCPEKLYQLMLQCWKHDPEDRPSF 951 (1025)
T ss_pred -----cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC--ccCCCCCCChHHHHHHHHHccCChhhCccH
Confidence 679999999999999999998 999999999888887777766 455678889999999999999999999999
Q ss_pred HHHhc
Q psy9090 158 SELLE 162 (488)
Q Consensus 158 ~ell~ 162 (488)
..|++
T Consensus 952 ~~i~~ 956 (1025)
T KOG1095|consen 952 RTIVE 956 (1025)
T ss_pred HHHHh
Confidence 99987
No 407
>KOG0194|consensus
Probab=99.86 E-value=4.4e-22 Score=202.41 Aligned_cols=156 Identities=29% Similarity=0.475 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++..+...++.+.+.||+|||+++++||||-.+|+|++.++.+||+|||+++.............-...|+|||.+..
T Consensus 259 v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~-- 336 (474)
T KOG0194|consen 259 LPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNT-- 336 (474)
T ss_pred CCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhcc--
Confidence 456788899999999999999999999999999999999999999999998765422111111123468999999986
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..|++++||||+||++||+.+ |..||.+........++.....+.. .+...+..+..++.+|+..+|+.|||+.+
T Consensus 337 ---~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~-~~~~~p~~~~~~~~~c~~~~p~~R~tm~~ 412 (474)
T KOG0194|consen 337 ---GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMP-IPSKTPKELAKVMKQCWKKDPEDRPTMST 412 (474)
T ss_pred ---CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCC-CCCCCHHHHHHHHHHhccCChhhccCHHH
Confidence 679999999999999999988 8999999998888888855433222 34466888999999999999999999998
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
+.+
T Consensus 413 i~~ 415 (474)
T KOG0194|consen 413 IKK 415 (474)
T ss_pred HHH
Confidence 865
No 408
>KOG4257|consensus
Probab=99.86 E-value=5e-22 Score=200.39 Aligned_cols=154 Identities=24% Similarity=0.432 Sum_probs=127.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc-ccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK-KTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~ 80 (488)
+-.....++.||..||.|||++++|||||...|||+.+...|||+|||+++......-.. +...-..-|||||.+.-
T Consensus 489 ~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf-- 566 (974)
T KOG4257|consen 489 PLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF-- 566 (974)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccch--
Confidence 445667899999999999999999999999999999999999999999999876542211 11122357999999865
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.++|||.|||++||++. |..||.+....+.+-.+-.+... +.|+++++.+..|+.+||.++|.+||.+.+
T Consensus 567 ---RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRl--P~P~nCPp~LYslmskcWayeP~kRPrfte 641 (974)
T KOG4257|consen 567 ---RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERL--PCPPNCPPALYSLMSKCWAYEPSKRPRFTE 641 (974)
T ss_pred ---hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCC--CCCCCCChHHHHHHHHHhccCcccCCcHHH
Confidence 678999999999999999865 99999988877776666655544 457889999999999999999999999887
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
+..
T Consensus 642 i~~ 644 (974)
T KOG4257|consen 642 IKA 644 (974)
T ss_pred HHH
Confidence 643
No 409
>KOG0576|consensus
Probab=99.85 E-value=9e-22 Score=200.28 Aligned_cols=167 Identities=45% Similarity=0.922 Sum_probs=146.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.++.+++++.+.||+|||+.|-+|||||-.|||++..|.+|++|||.+..+.....+...++|||.|||||+-.-+
T Consensus 109 lselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaave- 187 (829)
T KOG0576|consen 109 LSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE- 187 (829)
T ss_pred chhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHH-
Confidence 6799999999999999999999999999999999999999999999999998887776778899999999999986432
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRN--PPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
....|...||+|++|+...|+-.-++|..+..+...++-..+. .+|.+..+..|++.+.+|++.+|..+|++||+++
T Consensus 188 -rkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptae 266 (829)
T KOG0576|consen 188 -RKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAE 266 (829)
T ss_pred -hcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChh
Confidence 2367999999999999999999999998888877766655543 2344555678999999999999999999999999
Q ss_pred HHhcCcCCCCC
Q psy9090 159 ELLEHPFITSL 169 (488)
Q Consensus 159 ell~hp~f~~~ 169 (488)
.+|.|||+...
T Consensus 267 klL~h~fvs~~ 277 (829)
T KOG0576|consen 267 KLLQHPFVSQT 277 (829)
T ss_pred hheeceeeccc
Confidence 99999998753
No 410
>KOG1187|consensus
Probab=99.85 E-value=3.5e-21 Score=193.85 Aligned_cols=156 Identities=25% Similarity=0.480 Sum_probs=116.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CeecccCCCCEEEccCCcEEEEecCCccccccccCccccc-cCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENH---VIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTF-LGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~-~gt~~y~aPE~l 76 (488)
|++.....|+.+++.||+|||... ||||||||+|||+|++...||+|||+++..........+. .||..|+|||++
T Consensus 171 L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~ 250 (361)
T KOG1187|consen 171 LDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYA 250 (361)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhh
Confidence 578889999999999999999854 9999999999999999999999999996543211222222 799999999999
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCC---hHHHHH---HHHhC------CCCCCCCCCCcC-----HHH
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMH---PTRALF---QIVRN------PPPGLYRASNWS-----QHY 139 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~---~~~~~~---~~~~~------~~~~~~~~~~~s-----~~~ 139 (488)
.. ...+.++||||+|+++.|++||+.|..... ...... ..+.. ..+.+.. ..++ ..+
T Consensus 251 ~~-----g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~-~~~~~~~~~~~~ 324 (361)
T KOG1187|consen 251 ST-----GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKE-GEYPDEKEVKKL 324 (361)
T ss_pred cc-----CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccC-CCCChHHHHHHH
Confidence 76 568899999999999999999998886432 111111 11111 1111110 2223 224
Q ss_pred HHHHHHhcccCCCCCCCHHHHhc
Q psy9090 140 VDFIAECLEKNPEHRPYMSELLE 162 (488)
Q Consensus 140 ~~li~~~L~~dP~~Rps~~ell~ 162 (488)
..+..+|+..+|..||++.+++.
T Consensus 325 ~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 325 AELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHcCcCCCcCcCHHHHHH
Confidence 57888999999999999999754
No 411
>KOG4250|consensus
Probab=99.84 E-value=3.7e-21 Score=197.77 Aligned_cols=150 Identities=27% Similarity=0.584 Sum_probs=116.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEc--cCCc--EEEEecCCccccccccCccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLT--KDGE--VKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~--~~~~--vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l 76 (488)
|+|.++..++..+..||.|||++|||||||||.||++. .+|+ -||+|||.|+..... ....+.+||+.|.+||++
T Consensus 117 LpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~-s~~~S~vGT~~YLhPel~ 195 (732)
T KOG4250|consen 117 LPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN-SLFTSLVGTEEYLHPELY 195 (732)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCC-CeeeeecCchhhcChHHH
Confidence 78999999999999999999999999999999999985 3343 699999999998776 577788999999999998
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh----HHHHHHHHhCCCC------------------CCCCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP----TRALFQIVRNPPP------------------GLYRASN 134 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~----~~~~~~~~~~~~~------------------~~~~~~~ 134 (488)
.. ...|+..+|.||+||++|++.||..||.-... .+....+....+. .++.+..
T Consensus 196 E~----q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~ 271 (732)
T KOG4250|consen 196 ER----QKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNH 271 (732)
T ss_pred hh----ccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCccc
Confidence 63 26789999999999999999999999943322 2234444332211 1112222
Q ss_pred cCH----HHHHHHHHhcccCCCCCC
Q psy9090 135 WSQ----HYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 135 ~s~----~~~~li~~~L~~dP~~Rp 155 (488)
.++ .+-.++..+|..+|.+|.
T Consensus 272 Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 272 LSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred ccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 332 345788889999999998
No 412
>KOG0199|consensus
Probab=99.84 E-value=1.1e-20 Score=193.00 Aligned_cols=155 Identities=28% Similarity=0.437 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccc---cccCCCccccchhhccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKK---TFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~---~~~gt~~y~aPE~l~~~ 79 (488)
-...+.|+.||+.|+.||..+++|||||...|+|+-....|||+|||+.+.+........ ...-...|+|||.++.
T Consensus 211 v~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh- 289 (1039)
T KOG0199|consen 211 VSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRH- 289 (1039)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcc-
Confidence 356789999999999999999999999999999999999999999999987765422221 1112347999999986
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..++.++|+|++||++|||++ |..||.+.....++.++-. ...+..+..+++.+.++++.||..+|++|||+.
T Consensus 290 ----~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~--~erLpRPk~csedIY~imk~cWah~paDRptFs 363 (1039)
T KOG0199|consen 290 ----RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA--GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFS 363 (1039)
T ss_pred ----ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc--cccCCCCCCChHHHHHHHHHhccCCccccccHH
Confidence 679999999999999999987 8999999998777766653 345566788999999999999999999999999
Q ss_pred HHhcCc
Q psy9090 159 ELLEHP 164 (488)
Q Consensus 159 ell~hp 164 (488)
.|.+.-
T Consensus 364 air~~~ 369 (1039)
T KOG0199|consen 364 AIREDL 369 (1039)
T ss_pred HHHHhH
Confidence 886543
No 413
>KOG0200|consensus
Probab=99.83 E-value=2.4e-20 Score=200.75 Aligned_cols=155 Identities=30% Similarity=0.514 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc-ccccC--CCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK-KTFLG--SPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~-~~~~g--t~~y~aPE~l~ 77 (488)
|+..+...+..||+.|++||++..+|||||-..|||+..+..+|++|||+++......... ....+ ...|||||.+.
T Consensus 415 L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~ 494 (609)
T KOG0200|consen 415 LTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF 494 (609)
T ss_pred cCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc
Confidence 4678899999999999999999999999999999999999999999999998543321111 11122 23599999997
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMH-PTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
. ..|+.++||||+|++|||+.+ |..||.+.. .......+..+... ..|...++++.++|+.||..+|++||
T Consensus 495 ~-----~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~--~~P~~c~~eiY~iM~~CW~~~p~~RP 567 (609)
T KOG0200|consen 495 D-----RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRM--EQPEHCSDEIYDLMKSCWNADPEDRP 567 (609)
T ss_pred c-----CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhCCCcccCC
Confidence 6 679999999999999999987 999998865 33443333333322 34666799999999999999999999
Q ss_pred CHHHHhc
Q psy9090 156 YMSELLE 162 (488)
Q Consensus 156 s~~ell~ 162 (488)
++.++.+
T Consensus 568 ~F~~~~~ 574 (609)
T KOG0200|consen 568 TFSECVE 574 (609)
T ss_pred CHHHHHH
Confidence 9998875
No 414
>KOG1167|consensus
Probab=99.83 E-value=9.9e-21 Score=184.32 Aligned_cols=166 Identities=27% Similarity=0.533 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-CCcEEEEecCCccccc---------c------cc------
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-DGEVKIVDFGLSRETA---------N------TF------ 58 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~---------~------~~------ 58 (488)
++-.+++.+++.++.||.++|++|||||||||.|+|.+. .+.-.|+|||++.... . ..
T Consensus 129 l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~ 208 (418)
T KOG1167|consen 129 LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDV 208 (418)
T ss_pred CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcc
Confidence 356789999999999999999999999999999999974 4567899999986110 0 00
Q ss_pred -----------------------CccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh-
Q psy9090 59 -----------------------DKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP- 114 (488)
Q Consensus 59 -----------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~- 114 (488)
...-...||++|+|||++... ..-++++||||.|+|+..+++++.||.....
T Consensus 209 ~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~----~~QttaiDiws~GVI~Lslls~~~PFf~a~dd 284 (418)
T KOG1167|consen 209 HCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC----PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDD 284 (418)
T ss_pred cccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc----cCcCCccceeeccceeehhhccccccccCccc
Confidence 000123699999999998753 4567899999999999999999999953221
Q ss_pred HHHHHHHHh--------------CC------C-----------------CCCC-------C----CCCcCHHHHHHHHHh
Q psy9090 115 TRALFQIVR--------------NP------P-----------------PGLY-------R----ASNWSQHYVDFIAEC 146 (488)
Q Consensus 115 ~~~~~~~~~--------------~~------~-----------------~~~~-------~----~~~~s~~~~~li~~~ 146 (488)
...+.++.. +. . .... . ...++..+.+|+.+|
T Consensus 285 ~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~ 364 (418)
T KOG1167|consen 285 ADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKC 364 (418)
T ss_pred cchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHH
Confidence 111111110 00 0 0000 0 011245789999999
Q ss_pred cccCCCCCCCHHHHhcCcCCCCCC
Q psy9090 147 LEKNPEHRPYMSELLEHPFITSLP 170 (488)
Q Consensus 147 L~~dP~~Rps~~ell~hp~f~~~~ 170 (488)
|..||.+|.|++++|.||||....
T Consensus 365 le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 365 LELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred ccCChhhcccHHHHhcCcCCcchh
Confidence 999999999999999999998543
No 415
>KOG0590|consensus
Probab=99.83 E-value=4.1e-21 Score=204.41 Aligned_cols=167 Identities=25% Similarity=0.415 Sum_probs=132.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC----ccccccCCCccccchhh
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD----KKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~l 76 (488)
|+..++..+++|++.||+|||+.||.|||+||+|+++..+|.+||+|||.+.....+.. .....+|+..|+|||++
T Consensus 417 ~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~ 496 (601)
T KOG0590|consen 417 LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVL 496 (601)
T ss_pred cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccc
Confidence 45678999999999999999999999999999999999999999999999876544333 34567899999999999
Q ss_pred cccccCCCCCCC-ccchhhhHHHHHHHhcCCCCCCCCChHHHHH-HHHhCC-----CCCCCCCCCcCHHHHHHHHHhccc
Q psy9090 77 RCGHKEVDGYDN-RIDVWALGITAIELGDGKPPFEDMHPTRALF-QIVRNP-----PPGLYRASNWSQHYVDFIAECLEK 149 (488)
Q Consensus 77 ~~~~~~~~~~~~-~~DiwslGvil~elltg~~Pf~~~~~~~~~~-~~~~~~-----~~~~~~~~~~s~~~~~li~~~L~~ 149 (488)
.. ..|++ .+||||.|++++.|.+|+.||.........+ ...... ..+......++...+.+|.+||+.
T Consensus 497 ~~-----~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~ 571 (601)
T KOG0590|consen 497 TG-----KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQL 571 (601)
T ss_pred cc-----cccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccC
Confidence 86 55665 5899999999999999999996554332221 111100 011111234577889999999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCCCC
Q psy9090 150 NPEHRPYMSELLEHPFITSLPEN 172 (488)
Q Consensus 150 dP~~Rps~~ell~hp~f~~~~~~ 172 (488)
+|.+|.|+++|++.+||+.+..-
T Consensus 572 ~P~~R~ti~~i~~d~W~~~i~~c 594 (601)
T KOG0590|consen 572 DPTKRITIEQILNDEWIRSIECC 594 (601)
T ss_pred ChhheecHHHHhhChHhhhcceE
Confidence 99999999999999999987643
No 416
>KOG1290|consensus
Probab=99.82 E-value=3.4e-20 Score=182.99 Aligned_cols=102 Identities=28% Similarity=0.611 Sum_probs=73.8
Q ss_pred cCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCC---------ChHHHHHHHHhCCCC--------
Q psy9090 65 LGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDM---------HPTRALFQIVRNPPP-------- 127 (488)
Q Consensus 65 ~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~---------~~~~~~~~~~~~~~~-------- 127 (488)
+.|..|+|||++.+ .+|++.+||||++|+++||+||...|.-. .....+..++...+.
T Consensus 412 IQTRQYRapEVllG-----sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~ 486 (590)
T KOG1290|consen 412 IQTRQYRAPEVLLG-----SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKY 486 (590)
T ss_pred hhhhhccCcceeec-----CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcc
Confidence 35677999999998 78999999999999999999999988421 111222222211110
Q ss_pred ------------CCCCCCC------------cC----HHHHHHHHHhcccCCCCCCCHHHHhcCcCCCCCCC
Q psy9090 128 ------------GLYRASN------------WS----QHYVDFIAECLEKNPEHRPYMSELLEHPFITSLPE 171 (488)
Q Consensus 128 ------------~~~~~~~------------~s----~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 171 (488)
.+..... || .++.+|+.-||+.+|++|||+.++|+|||+..++.
T Consensus 487 SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~ 558 (590)
T KOG1290|consen 487 SRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG 558 (590)
T ss_pred hHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence 0011112 22 45689999999999999999999999999997654
No 417
>KOG0606|consensus
Probab=99.82 E-value=1.5e-20 Score=200.40 Aligned_cols=159 Identities=29% Similarity=0.483 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc---------------CccccccCCCccccchhh
Q psy9090 12 EIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF---------------DKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 12 qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~l 76 (488)
+++.+++|||+.||+|||+||+|.+|+.-|++|++|||+++...... -..+..+|||.|+|||++
T Consensus 151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi 230 (1205)
T KOG0606|consen 151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI 230 (1205)
T ss_pred hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence 45789999999999999999999999999999999999987432110 112456899999999998
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC-
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP- 155 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp- 155 (488)
.. .+|+..+|||++|+|+|+.+.|..||.+.++.++.-+.+.....-.......++++++++..+|..+|..|.
T Consensus 231 lr-----qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 231 LR-----QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hh-----hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 75 789999999999999999999999999999988888877654322223455689999999999999999995
Q ss_pred --CHHHHhcCcCCCCCCCCccc
Q psy9090 156 --YMSELLEHPFITSLPENDLH 175 (488)
Q Consensus 156 --s~~ell~hp~f~~~~~~~~~ 175 (488)
.+-++.+|+||+.++|..+.
T Consensus 306 t~ga~evk~h~ff~~LDw~~ll 327 (1205)
T KOG0606|consen 306 TGGALEVKQHGFFQLLDWKSLL 327 (1205)
T ss_pred cchhhhhhhccceeecccchhh
Confidence 56788899999999998543
No 418
>KOG1024|consensus
Probab=99.82 E-value=8.6e-20 Score=175.65 Aligned_cols=154 Identities=25% Similarity=0.402 Sum_probs=128.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc--CccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF--DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+..+.-.++.|+..|++|||++|+||.||...|++|++.-+|||+|=.+++..-+.. .....--....||+||.+..
T Consensus 394 tt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n- 472 (563)
T KOG1024|consen 394 TTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN- 472 (563)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh-
Confidence 455677899999999999999999999999999999999999999999988654321 11112223467999999987
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..|+..+|+||||+++|||+| |+.|+..-++.+....+..+.. +..|-++++++..+|.-||...|++||+++
T Consensus 473 ----~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR--laQP~NCPDeLf~vMacCWallpeeRPsf~ 546 (563)
T KOG1024|consen 473 ----SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR--LAQPFNCPDELFTVMACCWALLPEERPSFS 546 (563)
T ss_pred ----hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce--ecCCCCCcHHHHHHHHHHHhcCcccCCCHH
Confidence 679999999999999999987 9999999888776666655543 345778999999999999999999999999
Q ss_pred HHhc
Q psy9090 159 ELLE 162 (488)
Q Consensus 159 ell~ 162 (488)
|+..
T Consensus 547 Qlv~ 550 (563)
T KOG1024|consen 547 QLVI 550 (563)
T ss_pred HHHH
Confidence 9864
No 419
>KOG1345|consensus
Probab=99.81 E-value=3.7e-20 Score=170.54 Aligned_cols=163 Identities=21% Similarity=0.367 Sum_probs=119.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC--CcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD--GEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~--~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
-|.-.+.++.|+++||.|||++++||||||.+||||... ..|||||||+.+..+.... ..-.+..|.+||++..-
T Consensus 119 gE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~---~~~~~~~y~~pe~~~~~ 195 (378)
T KOG1345|consen 119 GEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVK---YLEYVNNYHAPELCDTV 195 (378)
T ss_pred cHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceeh---hhhhhcccCCcHHHhhc
Confidence 366778999999999999999999999999999999543 3699999999876654322 22245678999987543
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCC----ChHHHHHHHHhCCCCCCCC-CCCcCHHHHHHHHHhcccCCCCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDM----HPTRALFQIVRNPPPGLYR-ASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~----~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~li~~~L~~dP~~R 154 (488)
..+.-...+..|+|.||+++|.++||.+||... .+.-...++.....+..+. ...+|+.+..+.++-|.++|++|
T Consensus 196 ~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 196 VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred cccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 333334578899999999999999999999632 2223334444444333322 34569999999999999999999
Q ss_pred ---CCHHHHhcCcCCC
Q psy9090 155 ---PYMSELLEHPFIT 167 (488)
Q Consensus 155 ---ps~~ell~hp~f~ 167 (488)
.+++......|..
T Consensus 276 cki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 276 CKIWTAKKMRKCLWKE 291 (378)
T ss_pred chhHHHHHHHHHHHHH
Confidence 4555555555553
No 420
>KOG0196|consensus
Probab=99.81 E-value=1.2e-20 Score=194.98 Aligned_cols=153 Identities=26% Similarity=0.492 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcc-ccccC--CCccccchhhcccc
Q psy9090 4 QHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKK-KTFLG--SPSWMAPEIMRCGH 80 (488)
Q Consensus 4 ~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~-~~~~g--t~~y~aPE~l~~~~ 80 (488)
-++--+++.|+.|++||-+.|.|||||...|||++.+-.+|++|||+++.+....... .+.-| ...|.|||.+..
T Consensus 731 iQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~-- 808 (996)
T KOG0196|consen 731 IQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY-- 808 (996)
T ss_pred ehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhh--
Confidence 3556789999999999999999999999999999999999999999999775543222 22222 358999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
.+++.++||||+|+++||+++ |..||+++...+.+..+..+. .++.|.+++..+..|+..||++|-.+||.+.+
T Consensus 809 ---RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy--RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~q 883 (996)
T KOG0196|consen 809 ---RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY--RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQ 883 (996)
T ss_pred ---cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc--CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHH
Confidence 679999999999999999876 999999999888888887764 34457788999999999999999999999999
Q ss_pred HhcC
Q psy9090 160 LLEH 163 (488)
Q Consensus 160 ll~h 163 (488)
|+.+
T Consensus 884 iV~~ 887 (996)
T KOG0196|consen 884 IVST 887 (996)
T ss_pred HHHH
Confidence 9863
No 421
>KOG4278|consensus
Probab=99.80 E-value=1.8e-19 Score=181.79 Aligned_cols=149 Identities=24% Similarity=0.528 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccC---CCccccchhhccccc
Q psy9090 5 HIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLG---SPSWMAPEIMRCGHK 81 (488)
Q Consensus 5 ~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~g---t~~y~aPE~l~~~~~ 81 (488)
...+++.||..|+.||..+++|||||...|+|+.++..||++|||+++.+... ....+.| ..-|.|||.+..
T Consensus 366 vLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD--TYTAHAGAKFPIKWTAPEsLAy--- 440 (1157)
T KOG4278|consen 366 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY--- 440 (1157)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC--ceecccCccCcccccCcccccc---
Confidence 45678899999999999999999999999999999999999999999876543 2222222 457999999875
Q ss_pred CCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHHH
Q psy9090 82 EVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSEL 160 (488)
Q Consensus 82 ~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 160 (488)
..++.++|||+|||+|||+.| |-.||.+.+... .+.++.+.. ....|..+++.+..||..||+.+|..||++.++
T Consensus 441 --NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-VY~LLEkgy-RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 441 --NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYGLLEKGY-RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred --cccccchhhHHHHHHHHHHHhcCCCCCCCccHHH-HHHHHhccc-cccCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 678999999999999999987 888999877544 344443321 223467889999999999999999999999887
Q ss_pred hc
Q psy9090 161 LE 162 (488)
Q Consensus 161 l~ 162 (488)
-+
T Consensus 517 Hq 518 (1157)
T KOG4278|consen 517 HQ 518 (1157)
T ss_pred HH
Confidence 43
No 422
>KOG1094|consensus
Probab=99.80 E-value=1e-19 Score=182.80 Aligned_cols=152 Identities=26% Similarity=0.418 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccc--cCccccccCCCccccchhhcccccCC
Q psy9090 6 IAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANT--FDKKKTFLGSPSWMAPEIMRCGHKEV 83 (488)
Q Consensus 6 ~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~ 83 (488)
...|+.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++..-.. .......+-...|||||.+..
T Consensus 639 ~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsill----- 713 (807)
T KOG1094|consen 639 GVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILL----- 713 (807)
T ss_pred hHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHh-----
Confidence 4469999999999999999999999999999999999999999999855332 112223445679999999876
Q ss_pred CCCCCccchhhhHHHHHHH--hcCCCCCCCCChHHHHHHHH---hCCCC--CCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 84 DGYDNRIDVWALGITAIEL--GDGKPPFEDMHPTRALFQIV---RNPPP--GLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 84 ~~~~~~~DiwslGvil~el--ltg~~Pf~~~~~~~~~~~~~---~~~~~--~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
.+++.++|+|++|+++||+ +|...||...+........- ....+ -...|.-++..+.++|.+||..+.++|||
T Consensus 714 gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPs 793 (807)
T KOG1094|consen 714 GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPS 793 (807)
T ss_pred ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCC
Confidence 6799999999999999997 57899998887655544332 22111 12346677899999999999999999999
Q ss_pred HHHHhc
Q psy9090 157 MSELLE 162 (488)
Q Consensus 157 ~~ell~ 162 (488)
++++..
T Consensus 794 Fe~lh~ 799 (807)
T KOG1094|consen 794 FEQLHL 799 (807)
T ss_pred HHHHHH
Confidence 999854
No 423
>KOG0603|consensus
Probab=99.79 E-value=6.4e-20 Score=187.20 Aligned_cols=167 Identities=29% Similarity=0.457 Sum_probs=141.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhccccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHK 81 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~ 81 (488)
.+...+.+...++.+++++|+.+++|||+|++||+++.+|++++.|||+++...... ..+||..|||||++.+
T Consensus 95 ~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----~~cgt~eymApEI~~g--- 167 (612)
T KOG0603|consen 95 DELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----IACGTYEYRAPEIING--- 167 (612)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh----hcccchhhhhhHhhhc---
Confidence 467889999999999999999999999999999999999999999999998765431 1289999999999963
Q ss_pred CCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC-----
Q psy9090 82 EVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY----- 156 (488)
Q Consensus 82 ~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps----- 156 (488)
....+|+||+|+++++|++|..||.. +...+|.+.. ...|...+..+++++..++..+|..|..
T Consensus 168 ----h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~---~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~ 236 (612)
T KOG0603|consen 168 ----HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAE---LEMPRELSAEARSLFRQLFKRNPENRLGAGPDG 236 (612)
T ss_pred ----cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhc---cCCchhhhHHHHHHHHHHHhhCHHHHhccCcch
Confidence 56789999999999999999999987 4455555432 2346778999999999999999999974
Q ss_pred HHHHhcCcCCCCCCCCcccccccccccccc
Q psy9090 157 MSELLEHPFITSLPENDLHLSTVNCQYKDQ 186 (488)
Q Consensus 157 ~~ell~hp~f~~~~~~~~~~~~~~~~~~~~ 186 (488)
+.++++|+||..+.|+.+......+++++.
T Consensus 237 ~~eik~h~f~~~i~~~~l~~r~~~~~fkp~ 266 (612)
T KOG0603|consen 237 VDEIKQHEFFQSIDWNELEARSRPPPFKPG 266 (612)
T ss_pred hHHHhccchheeeeHhhHhhcCCCCCCCCc
Confidence 478999999999999988777776666543
No 424
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.78 E-value=2.7e-19 Score=204.25 Aligned_cols=153 Identities=20% Similarity=0.344 Sum_probs=111.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHH---HCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhc
Q psy9090 1 MSEQHIAFILKEIITGMVFLH---ENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~ 77 (488)
+++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||....... .....+|+.|+|||++.
T Consensus 777 l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----~~~~~~t~~y~aPE~~~ 851 (968)
T PLN00113 777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----DTKCFISSAYVAPETRE 851 (968)
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----CCCccccccccCccccc
Confidence 467888999999999999999 6699999999999999998887775 554432211 12336889999999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChH-HHHHHHHh----CC------CCCCCC----CCCcCHHHHHH
Q psy9090 78 CGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPT-RALFQIVR----NP------PPGLYR----ASNWSQHYVDF 142 (488)
Q Consensus 78 ~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~-~~~~~~~~----~~------~~~~~~----~~~~s~~~~~l 142 (488)
+ ..|+.++||||+||++|||++|+.||...... ..+....+ .. .+.... ......++.++
T Consensus 852 ~-----~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 926 (968)
T PLN00113 852 T-----KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNL 926 (968)
T ss_pred C-----CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHH
Confidence 5 56899999999999999999999998532110 00111111 00 011100 01112356789
Q ss_pred HHHhcccCCCCCCCHHHHhcC
Q psy9090 143 IAECLEKNPEHRPYMSELLEH 163 (488)
Q Consensus 143 i~~~L~~dP~~Rps~~ell~h 163 (488)
+.+||..+|++|||+.++++.
T Consensus 927 ~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 927 ALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred HHhhCcCCchhCcCHHHHHHH
Confidence 999999999999999999874
No 425
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.77 E-value=1.5e-18 Score=160.04 Aligned_cols=126 Identities=42% Similarity=0.752 Sum_probs=108.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-CCcEEEEecCCccccccccCccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-DGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..++.++.+++.+|++||+.|++|+||+|.||+++. ++.++|+|||.+..............+...|++||.+...
T Consensus 89 ~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~ 168 (215)
T cd00180 89 LSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGK 168 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhccc
Confidence 467889999999999999999999999999999999999 8999999999987654432123345678899999998752
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..++.+.|+|++|++++++ ..+.+++.+|+..+|.+||++.+
T Consensus 169 ----~~~~~~~D~~~lg~~~~~l----------------------------------~~~~~~l~~~l~~~p~~R~~~~~ 210 (215)
T cd00180 169 ----GYYSEKSDIWSLGVILYEL----------------------------------PELKDLIRKMLQKDPEKRPSAKE 210 (215)
T ss_pred ----CCCCchhhhHHHHHHHHHH----------------------------------HHHHHHHHHHhhCCcccCcCHHH
Confidence 2677899999999999998 67789999999999999999999
Q ss_pred HhcCc
Q psy9090 160 LLEHP 164 (488)
Q Consensus 160 ll~hp 164 (488)
+++|+
T Consensus 211 l~~~~ 215 (215)
T cd00180 211 ILEHL 215 (215)
T ss_pred HhhCC
Confidence 99875
No 426
>KOG1025|consensus
Probab=99.76 E-value=2.9e-18 Score=178.17 Aligned_cols=153 Identities=28% Similarity=0.460 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCcccccc--CCCccccchhhcccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFL--GSPSWMAPEIMRCGH 80 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~--gt~~y~aPE~l~~~~ 80 (488)
-++...|..||++|+.|||++++|||||-..|+|+.+..++|+.|||+++............. -.+.|+|-|.++.
T Consensus 797 sq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~-- 874 (1177)
T KOG1025|consen 797 SQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRI-- 874 (1177)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhc--
Confidence 356778999999999999999999999999999999999999999999987765433332222 3457899998875
Q ss_pred cCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMSE 159 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 159 (488)
..|+.++||||+||.+||++| |..|+.+.... .+...++.... +..|+..+.++..++.+||..|+..||++++
T Consensus 875 ---~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-eI~dlle~geR-LsqPpiCtiDVy~~mvkCwmid~~~rp~fke 949 (1177)
T KOG1025|consen 875 ---RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-EIPDLLEKGER-LSQPPICTIDVYMVMVKCWMIDADSRPTFKE 949 (1177)
T ss_pred ---cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-HhhHHHhcccc-CCCCCCccHHHHHHHHHHhccCcccCccHHH
Confidence 789999999999999999988 99999887754 44555544332 6678888999999999999999999999998
Q ss_pred Hhc
Q psy9090 160 LLE 162 (488)
Q Consensus 160 ll~ 162 (488)
+..
T Consensus 950 l~~ 952 (1177)
T KOG1025|consen 950 LAE 952 (1177)
T ss_pred HHH
Confidence 764
No 427
>KOG1152|consensus
Probab=99.75 E-value=7e-19 Score=176.73 Aligned_cols=105 Identities=30% Similarity=0.603 Sum_probs=93.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
|+|.+++.|++||+.|+++||+.||||||||-+|+.++.+|.+||+|||.+..... .+...++||..|.|||++.+.
T Consensus 667 m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ks--gpfd~f~gtv~~aapevl~g~- 743 (772)
T KOG1152|consen 667 MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKS--GPFDVFVGTVDYAAPEVLGGE- 743 (772)
T ss_pred cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcC--CCcceeeeeccccchhhhCCC-
Confidence 68999999999999999999999999999999999999999999999999877654 456788999999999999873
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCCCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPFED 111 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf~~ 111 (488)
.-.+...|||+||++||.++....||..
T Consensus 744 ---~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 744 ---KYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ---ccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 2235678999999999999999988853
No 428
>KOG3653|consensus
Probab=99.73 E-value=4.4e-18 Score=167.81 Aligned_cols=158 Identities=29% Similarity=0.475 Sum_probs=111.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHC---------CCeecccCCCCEEEccCCcEEEEecCCccccccccCc--cccccCCCc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHEN---------HVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK--KKTFLGSPS 69 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~---------givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~--~~~~~gt~~ 69 (488)
++..+.++++..|+.||+|||.- .|+|||||..|||+..++...|+|||++..+...... ....+||..
T Consensus 304 isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~R 383 (534)
T KOG3653|consen 304 ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRR 383 (534)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhh
Confidence 36788999999999999999963 5999999999999999999999999999877644222 233689999
Q ss_pred cccchhhcccccCCCC-CCCccchhhhHHHHHHHhcCCC------------CCC---CCCh-HHHHHHH-HhCC-CCCC-
Q psy9090 70 WMAPEIMRCGHKEVDG-YDNRIDVWALGITAIELGDGKP------------PFE---DMHP-TRALFQI-VRNP-PPGL- 129 (488)
Q Consensus 70 y~aPE~l~~~~~~~~~-~~~~~DiwslGvil~elltg~~------------Pf~---~~~~-~~~~~~~-~~~~-~~~~- 129 (488)
|||||++.+.-.-... --.+.||||+|.++|||+++.. ||. +.++ .+.++.. ++.. +|..
T Consensus 384 YMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p 463 (534)
T KOG3653|consen 384 YMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIP 463 (534)
T ss_pred hcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCCh
Confidence 9999999763211101 1135899999999999987533 232 1111 1222222 2221 1211
Q ss_pred --CCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 130 --YRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 130 --~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
+........+++.+..||+.||+.|+|+.
T Consensus 464 ~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 464 DAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 11222246678999999999999999985
No 429
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.71 E-value=3.7e-18 Score=164.19 Aligned_cols=138 Identities=25% Similarity=0.362 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc---cCC
Q psy9090 7 AFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH---KEV 83 (488)
Q Consensus 7 ~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~ 83 (488)
..+..|++..+++||+.|+||+||+|+|++++.+|.++|+||+.....+..... ...+..|.|||...... ...
T Consensus 148 l~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~~~~ 224 (288)
T PF14531_consen 148 LSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC---SEFPVAFTPPELESCAGQFGQNN 224 (288)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG---GGS-TTTS-HHHHHHHTSCHHSE
T ss_pred HHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec---cCCCcccCChhhhhhhcccCccc
Confidence 456699999999999999999999999999999999999999876654432111 23457899999875421 012
Q ss_pred CCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCC
Q psy9090 84 DGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHR 154 (488)
Q Consensus 84 ~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 154 (488)
..++.+.|.|+||+++|.|+||..||....+...... ......++++.++.||..||+.||.+|
T Consensus 225 ~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 225 APYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp EEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred ceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 3578899999999999999999999976543221111 122233789999999999999999987
No 430
>KOG2052|consensus
Probab=99.69 E-value=1e-16 Score=157.16 Aligned_cols=158 Identities=23% Similarity=0.464 Sum_probs=113.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHC--------CCeecccCCCCEEEccCCcEEEEecCCcccccccc----CccccccCCC
Q psy9090 1 MSEQHIAFILKEIITGMVFLHEN--------HVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF----DKKKTFLGSP 68 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~--------givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~----~~~~~~~gt~ 68 (488)
++.+....++..++.||++||-. .|.|||||..|||+.++|..-|+|+|+|....... ......+||-
T Consensus 305 v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTK 384 (513)
T KOG2052|consen 305 VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTK 384 (513)
T ss_pred CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCcccee
Confidence 45677889999999999999953 49999999999999999999999999997654331 2345678999
Q ss_pred ccccchhhcccccCCCCC--CCccchhhhHHHHHHHhc----------CCCCCCCCCh----HHHHHHHHh--CCCCCCC
Q psy9090 69 SWMAPEIMRCGHKEVDGY--DNRIDVWALGITAIELGD----------GKPPFEDMHP----TRALFQIVR--NPPPGLY 130 (488)
Q Consensus 69 ~y~aPE~l~~~~~~~~~~--~~~~DiwslGvil~ellt----------g~~Pf~~~~~----~~~~~~~~~--~~~~~~~ 130 (488)
.|||||++...- +...+ -..+||||||.++||+.. -++||.+..+ .+.+.+++. ...|..
T Consensus 385 RYMAPEvLdeti-n~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~i- 462 (513)
T KOG2052|consen 385 RYMAPEVLDETI-NMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNI- 462 (513)
T ss_pred eccChHHhhhhc-ChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCC-
Confidence 999999996411 00111 135899999999999864 2678865433 334444432 222322
Q ss_pred CCCCcC-----HHHHHHHHHhcccCCCCCCCHHHHh
Q psy9090 131 RASNWS-----QHYVDFIAECLEKNPEHRPYMSELL 161 (488)
Q Consensus 131 ~~~~~s-----~~~~~li~~~L~~dP~~Rps~~ell 161 (488)
|..|+ ..+..+|+.||..||.-|.|+-.+.
T Consensus 463 -pnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 463 -PNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred -CcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 23332 3456789999999999999986654
No 431
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.67 E-value=2.4e-16 Score=147.85 Aligned_cols=121 Identities=36% Similarity=0.605 Sum_probs=97.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc-CccccccCCCccccchhhccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF-DKKKTFLGSPSWMAPEIMRCG 79 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~l~~~ 79 (488)
+++..+..++.|++.++.+||+++++|+||+|.||+++.++.++|+|||.+....... .......++..|++||.+..
T Consensus 95 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~- 173 (225)
T smart00221 95 LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLG- 173 (225)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcC-
Confidence 4677889999999999999999999999999999999999999999999887654331 12234567889999999841
Q ss_pred ccCCCCCCCccchhhhHHHHHHHhcCCCCCCC-CChHHHHHHHHhCC
Q psy9090 80 HKEVDGYDNRIDVWALGITAIELGDGKPPFED-MHPTRALFQIVRNP 125 (488)
Q Consensus 80 ~~~~~~~~~~~DiwslGvil~elltg~~Pf~~-~~~~~~~~~~~~~~ 125 (488)
...++.++|+|+||+++++|++|+.||.. ..+...+.+.+...
T Consensus 174 ---~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (225)
T smart00221 174 ---GKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG 217 (225)
T ss_pred ---CCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence 25677799999999999999999999977 45554454444443
No 432
>KOG1240|consensus
Probab=99.66 E-value=2e-16 Score=169.54 Aligned_cols=158 Identities=18% Similarity=0.205 Sum_probs=111.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccC---ccc----cccCCCccccch
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFD---KKK----TFLGSPSWMAPE 74 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~---~~~----~~~gt~~y~aPE 74 (488)
..-+-+.|+.||+.||..||..||+|||||.+||||++-+.+.|+||...+..--+.+ ... +.....+|+|||
T Consensus 118 ~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPE 197 (1431)
T KOG1240|consen 118 VLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPE 197 (1431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChH
Confidence 3567889999999999999999999999999999999999999999987765421111 111 122335899999
Q ss_pred hhcccc-----cCCCC-CCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCC-C-CCCCCCcCHHHHHHHHH
Q psy9090 75 IMRCGH-----KEVDG-YDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPP-G-LYRASNWSQHYVDFIAE 145 (488)
Q Consensus 75 ~l~~~~-----~~~~~-~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~-~-~~~~~~~s~~~~~li~~ 145 (488)
.+.... ....+ .+++-||||+||++.||++ |++||.- .++.....+... . .....--+..+++||..
T Consensus 198 RFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~ 273 (1431)
T KOG1240|consen 198 RFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGNADDPEQLLEKIEDVSLRNLILS 273 (1431)
T ss_pred hhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccCccCHHHHHHhCcCccHHHHHHH
Confidence 886521 00122 6788999999999999977 7998853 122222221100 0 00000014467899999
Q ss_pred hcccCCCCCCCHHHHhcC
Q psy9090 146 CLEKNPEHRPYMSELLEH 163 (488)
Q Consensus 146 ~L~~dP~~Rps~~ell~h 163 (488)
|++.||++|.|+++.|+.
T Consensus 274 Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 274 MIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHccCchhccCHHHHHHh
Confidence 999999999999999874
No 433
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.66 E-value=1.4e-15 Score=149.39 Aligned_cols=167 Identities=34% Similarity=0.571 Sum_probs=127.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-cEEEEecCCccccccccC------ccccccCCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-EVKIVDFGLSRETANTFD------KKKTFLGSPSWMAP 73 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~~~~------~~~~~~gt~~y~aP 73 (488)
+++..+..++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||.+........ ......||+.|++|
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~p 177 (384)
T COG0515 98 LSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177 (384)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCH
Confidence 46788999999999999999999999999999999999988 799999999875443221 24567899999999
Q ss_pred hhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCCh---HHHHHHHHhCCCCC-CCCCCCc------CHHHHHHH
Q psy9090 74 EIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHP---TRALFQIVRNPPPG-LYRASNW------SQHYVDFI 143 (488)
Q Consensus 74 E~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~---~~~~~~~~~~~~~~-~~~~~~~------s~~~~~li 143 (488)
|.+.+.. ...++...|+||+|++++++++|..||..... .......+...... ....... ...+.+++
T Consensus 178 e~~~~~~--~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (384)
T COG0515 178 EVLLGLS--LAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLL 255 (384)
T ss_pred HHhcCCC--CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHH
Confidence 9987510 03567889999999999999999999877653 23333333222211 1111111 25788999
Q ss_pred HHhcccCCCCCCCHHHHhcCcCCCCC
Q psy9090 144 AECLEKNPEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 144 ~~~L~~dP~~Rps~~ell~hp~f~~~ 169 (488)
.+++..+|..|.+..+...++|....
T Consensus 256 ~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 256 KKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred HHHHhcCchhcCCHHHHhhchHhhCc
Confidence 99999999999999998888666543
No 434
>KOG4158|consensus
Probab=99.64 E-value=1.1e-15 Score=147.91 Aligned_cols=155 Identities=24% Similarity=0.320 Sum_probs=109.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEc--cCC--cEEEEecCCccccccc------cCccccccCCCccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLT--KDG--EVKIVDFGLSRETANT------FDKKKTFLGSPSWM 71 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~--~~~--~vkL~Dfg~a~~~~~~------~~~~~~~~gt~~y~ 71 (488)
+....+.++.|+++|+.|||++||.|||+|.+|||+. .++ .+.++|||.+--.... .......-|....|
T Consensus 339 s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lm 418 (598)
T KOG4158|consen 339 SYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLM 418 (598)
T ss_pred chHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceec
Confidence 3456678999999999999999999999999999984 333 4789999976322110 01112334677889
Q ss_pred cchhhcccccCCCCC-CCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh-CCCCCCCCCCCcCHHHHHHHHHhccc
Q psy9090 72 APEIMRCGHKEVDGY-DNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR-NPPPGLYRASNWSQHYVDFIAECLEK 149 (488)
Q Consensus 72 aPE~l~~~~~~~~~~-~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~ 149 (488)
|||+........... -.++|.|+.|.+.||+++...||.+......-.+-.+ ...|. .+...++.+++++..+|+.
T Consensus 419 APEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPa--lp~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 419 APEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPA--LPSRVPPVARQLVFDLLKR 496 (598)
T ss_pred chhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCC--CcccCChHHHHHHHHHhcC
Confidence 999986532111111 2489999999999999999999987432221111111 11222 3566789999999999999
Q ss_pred CCCCCCCHH
Q psy9090 150 NPEHRPYMS 158 (488)
Q Consensus 150 dP~~Rps~~ 158 (488)
||++|+|+.
T Consensus 497 ~pskRvsp~ 505 (598)
T KOG4158|consen 497 DPSKRVSPN 505 (598)
T ss_pred CccccCCcc
Confidence 999999864
No 435
>KOG1033|consensus
Probab=99.59 E-value=5.2e-16 Score=155.93 Aligned_cols=151 Identities=28% Similarity=0.449 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccccccc------CccccccCCCccccchhh
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTF------DKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~------~~~~~~~gt~~y~aPE~l 76 (488)
...+..++.|+..++.| +|.+|+|+||.||+...+..+||+|||+.+...... .......||..||+||.+
T Consensus 358 ~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi 434 (516)
T KOG1033|consen 358 LSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQI 434 (516)
T ss_pred hhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHH
Confidence 34678899999999999 999999999999999999999999999987654432 234566899999999999
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGD-GKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRP 155 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 155 (488)
.+ ..|+.++||||||++|+|++. -..++.- ......+..+..|+.. ..+ .+.-..|+.+||.+.|.+||
T Consensus 435 ~g-----~~y~~kvdIyaLGlil~EL~~~f~T~~er---~~t~~d~r~g~ip~~~-~~d-~p~e~~ll~~lls~~p~~RP 504 (516)
T KOG1033|consen 435 RG-----QQYSEKVDIYALGLILAELLIQFSTQFER---IATLTDIRDGIIPPEF-LQD-YPEEYTLLQQLLSPSPEERP 504 (516)
T ss_pred hh-----hhhhhhcchhhHHHHHHHHHHHhccHHHH---HHhhhhhhcCCCChHH-hhc-CcHHHHHHHHhcCCCcccCc
Confidence 87 779999999999999999987 2222221 1112222222222111 112 23446899999999999999
Q ss_pred CHHHHhcCcCC
Q psy9090 156 YMSELLEHPFI 166 (488)
Q Consensus 156 s~~ell~hp~f 166 (488)
++.+.--|+|.
T Consensus 505 ~~~~~~~~~~~ 515 (516)
T KOG1033|consen 505 SAIEVALHEFL 515 (516)
T ss_pred hHHHHhhhhhc
Confidence 87777667664
No 436
>KOG1164|consensus
Probab=99.57 E-value=2.3e-14 Score=143.25 Aligned_cols=157 Identities=20% Similarity=0.261 Sum_probs=115.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC-----CcEEEEecCCcc--cccccc------C-c-ccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD-----GEVKIVDFGLSR--ETANTF------D-K-KKTFL 65 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-----~~vkL~Dfg~a~--~~~~~~------~-~-~~~~~ 65 (488)
|+...+..++.|++.+|++||+.|++||||||+|+++... ..+.|.|||+++ ...... . . ...+.
T Consensus 119 fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~r 198 (322)
T KOG1164|consen 119 FSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFR 198 (322)
T ss_pred cCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCC
Confidence 5678899999999999999999999999999999999865 358999999998 321111 1 1 22456
Q ss_pred CCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCC--CCCCcCHHHHHHH
Q psy9090 66 GSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLY--RASNWSQHYVDFI 143 (488)
Q Consensus 66 gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~li 143 (488)
||..|.++.+..+ ...+++.|+||++.++.++..|..||..........+.......... .....+..+..+.
T Consensus 199 GT~ry~S~~~H~~-----~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (322)
T KOG1164|consen 199 GTLRYASINVHLG-----IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKIL 273 (322)
T ss_pred CccccccHHHhCC-----CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHH
Confidence 9999999999876 56788999999999999999999999776543333332222111111 1222356677777
Q ss_pred HHhcccCCCCCCCHHHHhc
Q psy9090 144 AECLEKNPEHRPYMSELLE 162 (488)
Q Consensus 144 ~~~L~~dP~~Rps~~ell~ 162 (488)
..+-..+...+|....+..
T Consensus 274 ~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 274 EYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred HHhhccCCcCCCCHHHHHH
Confidence 7777788888998776654
No 437
>KOG1165|consensus
Probab=99.40 E-value=2.1e-12 Score=122.83 Aligned_cols=152 Identities=20% Similarity=0.380 Sum_probs=109.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC-----cEEEEecCCccccccccC-------ccccccCCC
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG-----EVKIVDFGLSRETANTFD-------KKKTFLGSP 68 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-----~vkL~Dfg~a~~~~~~~~-------~~~~~~gt~ 68 (488)
||.+.++.++.|++.-++|+|++.+|+|||||+|+||...+ .|.++|||+++....+.. ...+..||.
T Consensus 121 FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTA 200 (449)
T KOG1165|consen 121 FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTA 200 (449)
T ss_pred ccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccce
Confidence 56788999999999999999999999999999999998654 489999999987654322 235567999
Q ss_pred ccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHH--HHHHHhCC---CCCCCCCCCcCHHHHHHH
Q psy9090 69 SWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRA--LFQIVRNP---PPGLYRASNWSQHYVDFI 143 (488)
Q Consensus 69 ~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~--~~~~~~~~---~~~~~~~~~~s~~~~~li 143 (488)
.||+-....+ ..-+.+.|+=|||-+++..+-|..||.+...... ..+.+... .+.......++.++..-+
T Consensus 201 RYMSINTHlG-----rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl 275 (449)
T KOG1165|consen 201 RYMSINTHLG-----REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYL 275 (449)
T ss_pred eeeEeecccc-----chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHH
Confidence 9999888776 4457789999999999999999999987643222 22222111 111111234566665555
Q ss_pred HHhcccCCCCCCCH
Q psy9090 144 AECLEKNPEHRPYM 157 (488)
Q Consensus 144 ~~~L~~dP~~Rps~ 157 (488)
.-.-..+-.+-|..
T Consensus 276 ~yvR~L~F~E~PDY 289 (449)
T KOG1165|consen 276 RYVRRLDFFETPDY 289 (449)
T ss_pred HHHHhcCcccCCCH
Confidence 55545555555554
No 438
>KOG1163|consensus
Probab=99.38 E-value=1.1e-12 Score=119.72 Aligned_cols=153 Identities=14% Similarity=0.322 Sum_probs=113.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc---CCcEEEEecCCccccccccC-------ccccccCCCcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK---DGEVKIVDFGLSRETANTFD-------KKKTFLGSPSW 70 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~---~~~vkL~Dfg~a~~~~~~~~-------~~~~~~gt~~y 70 (488)
++.+.+..++-|++.-++|+|.+++|||||||+|+|..- ...+.|+|||+++...+... ......||..|
T Consensus 108 ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRY 187 (341)
T KOG1163|consen 108 FTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARY 187 (341)
T ss_pred hhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeee
Confidence 456788899999999999999999999999999999963 44689999999987643211 22455789999
Q ss_pred ccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHH---HHHhCC--CCCCCCCCCcCHHHHHHHHH
Q psy9090 71 MAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALF---QIVRNP--PPGLYRASNWSQHYVDFIAE 145 (488)
Q Consensus 71 ~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~---~~~~~~--~~~~~~~~~~s~~~~~li~~ 145 (488)
.+-....+ ..-+...|+-|+|.+|..+..|..||.+.......+ +|.... .+.......+|.++...+.-
T Consensus 188 ASinAh~g-----~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y 262 (341)
T KOG1163|consen 188 ASINAHLG-----IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNY 262 (341)
T ss_pred hhhhhhhh-----hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHH
Confidence 88776654 334678899999999999999999998875433222 222211 11112245678888888888
Q ss_pred hcccCCCCCCCHH
Q psy9090 146 CLEKNPEHRPYMS 158 (488)
Q Consensus 146 ~L~~dP~~Rps~~ 158 (488)
|-..--++-|...
T Consensus 263 ~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 263 CRGLGFEEKPDYM 275 (341)
T ss_pred HhhcCCCCCCcHH
Confidence 8877777777643
No 439
>KOG1023|consensus
Probab=99.38 E-value=1.8e-12 Score=132.85 Aligned_cols=159 Identities=23% Similarity=0.447 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC-eecccCCCCEEEccCCcEEEEecCCccccccc--cCccccccCCCccccchhhcccc
Q psy9090 4 QHIAFILKEIITGMVFLHENHV-IHRDLRGSNVLLTKDGEVKIVDFGLSRETANT--FDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 4 ~~~~~i~~qil~aL~~LH~~gi-vHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
--...+++.|+.||.|||.--| .|+.+++.|++++..-.+||+|||+....... ........-...|.|||.++...
T Consensus 48 ~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~ 127 (484)
T KOG1023|consen 48 FFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGAL 127 (484)
T ss_pred HHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccc
Confidence 3456788999999999998766 89999999999999999999999987655321 01111112334689999998742
Q ss_pred cCC--CCCCCccchhhhHHHHHHHhcCCCCCCCC----ChHHHHHHHHhCCC----CCCCCCCCcCHHHHHHHHHhcccC
Q psy9090 81 KEV--DGYDNRIDVWALGITAIELGDGKPPFEDM----HPTRALFQIVRNPP----PGLYRASNWSQHYVDFIAECLEKN 150 (488)
Q Consensus 81 ~~~--~~~~~~~DiwslGvil~elltg~~Pf~~~----~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~li~~~L~~d 150 (488)
... ...+.+.|+||+|++++|+++...||... .+.+.+.++..... |.........+.+..+++.||..+
T Consensus 128 ~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~ 207 (484)
T KOG1023|consen 128 SQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEI 207 (484)
T ss_pred cccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccC
Confidence 111 12467899999999999999999999652 22345555444122 222111234567899999999999
Q ss_pred CCCCCCHHHHhc
Q psy9090 151 PEHRPYMSELLE 162 (488)
Q Consensus 151 P~~Rps~~ell~ 162 (488)
|..||+++++-.
T Consensus 208 P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 208 PEKRPSIEQIRS 219 (484)
T ss_pred hhhCccHHHHHh
Confidence 999999998754
No 440
>KOG0590|consensus
Probab=99.37 E-value=8.8e-14 Score=148.50 Aligned_cols=163 Identities=29% Similarity=0.425 Sum_probs=128.6
Q ss_pred CHHHHHHHHHHHHHHHHHHH-HCCCeecccCCCCEEEccCC-cEEEEecCCcccccc-cc--CccccccC-CCccccchh
Q psy9090 2 SEQHIAFILKEIITGMVFLH-ENHVIHRDLRGSNVLLTKDG-EVKIVDFGLSRETAN-TF--DKKKTFLG-SPSWMAPEI 75 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH-~~givHrDlkp~NILl~~~~-~vkL~Dfg~a~~~~~-~~--~~~~~~~g-t~~y~aPE~ 75 (488)
+...+..++.|+..++.|+| ..++.|||+||+|.+++.++ .+++.|||+++.... .. ......+| ++.|.|||.
T Consensus 121 ~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~ 200 (601)
T KOG0590|consen 121 SSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEH 200 (601)
T ss_pred CCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCccc
Confidence 45667899999999999999 99999999999999999999 999999999987654 21 12344578 999999999
Q ss_pred hcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHH-HHHhCC-CCCCCCCCCcCHHHHHHHHHhcccCCCC
Q psy9090 76 MRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALF-QIVRNP-PPGLYRASNWSQHYVDFIAECLEKNPEH 153 (488)
Q Consensus 76 l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~-~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~ 153 (488)
..+. ....+..|+||+|+++..+++|..||.........+ ...... ..........+....+++.++|..+|..
T Consensus 201 ~~~~----~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~ 276 (601)
T KOG0590|consen 201 LSGK----AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSN 276 (601)
T ss_pred ccch----hhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchh
Confidence 8752 234578999999999999999999997654332211 111111 1122234556888999999999999999
Q ss_pred CCCHHHHhcCcCCCC
Q psy9090 154 RPYMSELLEHPFITS 168 (488)
Q Consensus 154 Rps~~ell~hp~f~~ 168 (488)
|.+.+++..+||+..
T Consensus 277 r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 277 RLSIEELKLDNWLSS 291 (601)
T ss_pred ccccccccccccccc
Confidence 999999999999987
No 441
>KOG0606|consensus
Probab=99.30 E-value=2.7e-12 Score=138.17 Aligned_cols=172 Identities=25% Similarity=0.415 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccc------cc-------------------
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA------NT------------------- 57 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~------~~------------------- 57 (488)
++-++.++..+++++++||...+.|+|++|.|+|+..+|+.++.|||...... ..
T Consensus 903 aepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~ 982 (1205)
T KOG0606|consen 903 AEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRP 982 (1205)
T ss_pred cccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccccc
Confidence 44567788899999999999999999999999999999999999998432110 00
Q ss_pred -c-----CccccccCCCccccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCC
Q psy9090 58 -F-----DKKKTFLGSPSWMAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYR 131 (488)
Q Consensus 58 -~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 131 (488)
. .......||+.|.+||.+.+ ......+|+|++|+++++.++|.+||....+......+.....+...-
T Consensus 983 ~l~~~~~~~~~~~~~t~~~laPe~~lg-----~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g 1057 (1205)
T KOG0606|consen 983 QLSADEARRKHAVVGTPDYLAPEILLG-----RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEG 1057 (1205)
T ss_pred ccccchhhccccccCCCcccCCccccc-----ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCC
Confidence 0 01234578999999999987 455678999999999999999999999998877776666655444444
Q ss_pred CCCcCHHHHHHHHHhcccCCCCCCCHH---HHhcCcCCCCCCCCccccccc
Q psy9090 132 ASNWSQHYVDFIAECLEKNPEHRPYMS---ELLEHPFITSLPENDLHLSTV 179 (488)
Q Consensus 132 ~~~~s~~~~~li~~~L~~dP~~Rps~~---ell~hp~f~~~~~~~~~~~~~ 179 (488)
+...+..+++++..+|..+|.+|..+. ++-.|+||+..+|..+.....
T Consensus 1058 ~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~~q~~ 1108 (1205)
T KOG0606|consen 1058 PEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLALQKA 1108 (1205)
T ss_pred ccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCccccccccC
Confidence 566789999999999999999999887 888999999999987755543
No 442
>KOG0195|consensus
Probab=99.29 E-value=9e-12 Score=115.50 Aligned_cols=148 Identities=24% Similarity=0.398 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC--CeecccCCCCEEEccCCcEEE--EecCCccccccccCccccccCCCccccchhhcc
Q psy9090 3 EQHIAFILKEIITGMVFLHENH--VIHRDLRGSNVLLTKDGEVKI--VDFGLSRETANTFDKKKTFLGSPSWMAPEIMRC 78 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~vkL--~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~ 78 (488)
..++-.++..|+.|++|||+.. |.--.|....++++++-..+| +|--++-. .....-.|.|++||.++.
T Consensus 288 ~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq-------e~gr~y~pawmspealqr 360 (448)
T KOG0195|consen 288 HSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ-------EVGRAYSPAWMSPEALQR 360 (448)
T ss_pred cchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee-------ccccccCcccCCHHHHhc
Confidence 4577889999999999999975 445578888999998776554 45333211 112345689999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHh-CCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVR-NPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
... ..--.++|+|||+++++|+.|...||.+..+.+.-.++-- +..+ ..|+.++..+..|+.-|+..||.+||.+
T Consensus 361 kpe--d~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv--~ippgis~hm~klm~icmnedpgkrpkf 436 (448)
T KOG0195|consen 361 KPE--DLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRV--HIPPGISRHMNKLMNICMNEDPGKRPKF 436 (448)
T ss_pred Cch--hcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccc--cCCCCccHHHHHHHHHHhcCCCCcCCCc
Confidence 322 1123579999999999999999999998888766555532 2222 2467789999999999999999999998
Q ss_pred HHHh
Q psy9090 158 SELL 161 (488)
Q Consensus 158 ~ell 161 (488)
+.++
T Consensus 437 dmiv 440 (448)
T KOG0195|consen 437 DMIV 440 (448)
T ss_pred ceeh
Confidence 7654
No 443
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.27 E-value=5.7e-12 Score=115.72 Aligned_cols=103 Identities=19% Similarity=0.166 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeeccc-CCCCEEEccCCcEEEEecCCccccccccCc-------------cccccCCCcccc
Q psy9090 7 AFILKEIITGMVFLHENHVIHRDL-RGSNVLLTKDGEVKIVDFGLSRETANTFDK-------------KKTFLGSPSWMA 72 (488)
Q Consensus 7 ~~i~~qil~aL~~LH~~givHrDl-kp~NILl~~~~~vkL~Dfg~a~~~~~~~~~-------------~~~~~gt~~y~a 72 (488)
..++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||++......... ......++.|+.
T Consensus 94 ~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~ 173 (218)
T PRK12274 94 LAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALT 173 (218)
T ss_pred HHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 457899999999999999999999 799999999999999999999855433210 011135778888
Q ss_pred chhhcccccCCCCCC-CccchhhhHHHHHHHhcCCCCCCCCC
Q psy9090 73 PEIMRCGHKEVDGYD-NRIDVWALGITAIELGDGKPPFEDMH 113 (488)
Q Consensus 73 PE~l~~~~~~~~~~~-~~~DiwslGvil~elltg~~Pf~~~~ 113 (488)
|+-..-- ...+ ...++++.|+-+|.++|+..|..+..
T Consensus 174 ~~~~~~l----~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 174 PVERRVL----KRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHhhh----ccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 8754321 1222 46788899999999999999876543
No 444
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.21 E-value=1.5e-11 Score=123.52 Aligned_cols=72 Identities=22% Similarity=0.313 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeeccc-CCCCEEEccCCcEEEEecCCccccccccC--------ccccccCCCccccchhhc
Q psy9090 7 AFILKEIITGMVFLHENHVIHRDL-RGSNVLLTKDGEVKIVDFGLSRETANTFD--------KKKTFLGSPSWMAPEIMR 77 (488)
Q Consensus 7 ~~i~~qil~aL~~LH~~givHrDl-kp~NILl~~~~~vkL~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~l~ 77 (488)
..++.|++++|.|||++||+|||| ||+|||++.++.+||+|||+++....... ......+++.|+|||.+.
T Consensus 114 ~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 114 PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 468899999999999999999999 99999999999999999999986543221 113556888899999986
Q ss_pred c
Q psy9090 78 C 78 (488)
Q Consensus 78 ~ 78 (488)
.
T Consensus 194 ~ 194 (365)
T PRK09188 194 P 194 (365)
T ss_pred h
Confidence 5
No 445
>KOG2137|consensus
Probab=99.11 E-value=8.8e-11 Score=122.25 Aligned_cols=167 Identities=17% Similarity=0.265 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHC-CCeecccCCCCEEEccCCcEEEEecCCccccccccCc---------cccccCCCccccchhhcccc
Q psy9090 11 KEIITGMVFLHEN-HVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDK---------KKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 11 ~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~---------~~~~~gt~~y~aPE~l~~~~ 80 (488)
.+++.|+.|+|.. ++||++|.|++|.++.+|.+||+.|+++.....+... .....-...|.|||++..
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-- 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-- 183 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc--
Confidence 4556889999975 8999999999999999999999999987654331110 011123457999999976
Q ss_pred cCCCCCCCccchhhhHHHHHHHh-cCCCCCCCCChHHHHHHHH--hCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELG-DGKPPFEDMHPTRALFQIV--RNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYM 157 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~ell-tg~~Pf~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~ 157 (488)
...+.++|++|+||++|.+. .|+.-+...... ...... ...........++++++++-+.++|..++..||++
T Consensus 184 ---~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 184 ---TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGL-LSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred ---ccccccccceeeeeEEEEEecCCcchhhccCCc-chhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 45678999999999999998 566555443221 111111 11222222346789999999999999999999999
Q ss_pred HHHhcCcCCCCCCCCccccccccccc
Q psy9090 158 SELLEHPFITSLPENDLHLSTVNCQY 183 (488)
Q Consensus 158 ~ell~hp~f~~~~~~~~~~~~~~~~~ 183 (488)
..++..|||.+..-..+.......+.
T Consensus 260 ~~l~~~~ff~D~~~~aLrfLD~l~~k 285 (700)
T KOG2137|consen 260 DLLLSIPFFSDPGLKALRFLDDLPQK 285 (700)
T ss_pred hhhhcccccCCchhhhhhhccccccc
Confidence 99999999998766666555555553
No 446
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.07 E-value=1.7e-10 Score=106.15 Aligned_cols=54 Identities=30% Similarity=0.437 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHHHHHH-HHCCCeecccCCCCEEEccCCcEEEEecCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFL-HENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA 55 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~L-H~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~ 55 (488)
++++++..++.|++.+|.+| |+.||+||||||+|||++ ++.++|+|||++....
T Consensus 114 ~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 114 LSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence 46788999999999999999 799999999999999998 5889999999987543
No 447
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.03 E-value=1.2e-10 Score=109.22 Aligned_cols=76 Identities=24% Similarity=0.339 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccccCCCCCCC
Q psy9090 9 ILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHKEVDGYDN 88 (488)
Q Consensus 9 i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~ 88 (488)
...+|+.+|..||+.|++|||+||+||+++.+| ++|+|||..+..... ... ..++.. ..|+.
T Consensus 140 ~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~--~a~----------d~~vle-----r~y~~ 201 (232)
T PRK10359 140 VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQR--KAK----------DRIDLE-----RHYGI 201 (232)
T ss_pred HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccch--hhH----------HHHHHH-----hHhcc
Confidence 467999999999999999999999999999988 999999987644221 000 012222 34667
Q ss_pred ccchhhhHHHHHHH
Q psy9090 89 RIDVWALGITAIEL 102 (488)
Q Consensus 89 ~~DiwslGvil~el 102 (488)
++|+||||+.+..+
T Consensus 202 ~~di~~lg~~~~~~ 215 (232)
T PRK10359 202 KNEIKDLGYYLLIY 215 (232)
T ss_pred cccccceeEeehHH
Confidence 89999999987655
No 448
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.02 E-value=4.5e-10 Score=103.44 Aligned_cols=54 Identities=24% Similarity=0.386 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA 55 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~ 55 (488)
+++.++..++.|++.++.+||+ +||+||||||+||+++ ++.++|+|||+++...
T Consensus 114 ~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 114 LEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 3567889999999999999999 9999999999999999 8999999999987654
No 449
>KOG1166|consensus
Probab=99.00 E-value=5.2e-10 Score=122.73 Aligned_cols=102 Identities=24% Similarity=0.276 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-------CCcEEEEecCCccccccc--cCccccccCCCccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-------DGEVKIVDFGLSRETANT--FDKKKTFLGSPSWM 71 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-------~~~vkL~Dfg~a~~~~~~--~~~~~~~~gt~~y~ 71 (488)
|+|..+.++..||+..|++||..+|||+||||+|+||.. +--++|+|||.+..+.-- .......++|-.+-
T Consensus 791 m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~ 870 (974)
T KOG1166|consen 791 MDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFD 870 (974)
T ss_pred CCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccch
Confidence 567889999999999999999999999999999999953 234899999998654322 23445667889999
Q ss_pred cchhhcccccCCCCCCCccchhhhHHHHHHHhcCCC
Q psy9090 72 APEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKP 107 (488)
Q Consensus 72 aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~ 107 (488)
++|+..+ .+++..+|.|.|+.+++-||.|+.
T Consensus 871 C~EM~~g-----rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 871 CIEMREG-----RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred hHHHhcC-----CCCchhhhhHHHHHHHHHHHHHHH
Confidence 9999987 788999999999999999999864
No 450
>KOG1266|consensus
Probab=98.93 E-value=1.4e-09 Score=103.92 Aligned_cols=159 Identities=19% Similarity=0.302 Sum_probs=107.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCCEEEccCCcEEEEecCCc--cccccc--cCccccccCCCccccch
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENH--VIHRDLRGSNVLLTKDGEVKIVDFGLS--RETANT--FDKKKTFLGSPSWMAPE 74 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~vkL~Dfg~a--~~~~~~--~~~~~~~~gt~~y~aPE 74 (488)
|++...++|+-||+.||.|||+.. |+|+++..+.|++..+|-||+.--.-. ...... ........+.++|.+||
T Consensus 173 ~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~ 252 (458)
T KOG1266|consen 173 LFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPE 252 (458)
T ss_pred hhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCC
Confidence 356788999999999999999986 999999999999999999987642211 100000 00111224568899999
Q ss_pred hhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCC-CCCh---HHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccC
Q psy9090 75 IMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFE-DMHP---TRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKN 150 (488)
Q Consensus 75 ~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~-~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 150 (488)
.-.. ...+..+|||++|....+|..+..--. +... ...+...+.... ...-++++.+||...
T Consensus 253 sg~~-----tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le---------n~lqr~~i~kcl~~e 318 (458)
T KOG1266|consen 253 SGTT-----TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE---------NGLQRGSITKCLEGE 318 (458)
T ss_pred cCcc-----cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc---------CccccCcCcccccCC
Confidence 7543 445668999999999999977654321 1111 111111111111 112246899999999
Q ss_pred CCCCCCHHHHhcCcCCCCCCCCc
Q psy9090 151 PEHRPYMSELLEHPFITSLPEND 173 (488)
Q Consensus 151 P~~Rps~~ell~hp~f~~~~~~~ 173 (488)
|..||++.+++.||..-.++...
T Consensus 319 P~~rp~ar~llfHpllfeVhslk 341 (458)
T KOG1266|consen 319 PNGRPDARLLLFHPLLFEVHSLK 341 (458)
T ss_pred CCCCcchhhhhcCceeeecchHH
Confidence 99999999999999887765543
No 451
>KOG0601|consensus
Probab=98.87 E-value=1.3e-09 Score=112.17 Aligned_cols=161 Identities=20% Similarity=0.223 Sum_probs=122.0
Q ss_pred CCHHHHHHHHHHHHH----HHHHHHHCCCeecccCCCCEEEccC-CcEEEEecCCccccccccCcc-----ccccCCCcc
Q psy9090 1 MSEQHIAFILKEIIT----GMVFLHENHVIHRDLRGSNVLLTKD-GEVKIVDFGLSRETANTFDKK-----KTFLGSPSW 70 (488)
Q Consensus 1 L~e~~~~~i~~qil~----aL~~LH~~givHrDlkp~NILl~~~-~~vkL~Dfg~a~~~~~~~~~~-----~~~~gt~~y 70 (488)
+++..++.++.+..+ ||.++|..+++|-|+||+||++..+ ...+++|||+...+....... ....|...|
T Consensus 215 ~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y 294 (524)
T KOG0601|consen 215 LPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIY 294 (524)
T ss_pred CCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceE
Confidence 467889999999999 9999999999999999999999999 789999999988776543221 222577889
Q ss_pred ccchhhcccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccC
Q psy9090 71 MAPEIMRCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKN 150 (488)
Q Consensus 71 ~aPE~l~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 150 (488)
++||...+ -++...|++++|.+..+..++..+...... ..+.++.....+.. .....+..+...+..|++.+
T Consensus 295 ~~ke~~~~------l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-~~W~~~r~~~ip~e-~~~~~s~~l~~~~~~~~d~~ 366 (524)
T KOG0601|consen 295 AAKELLNG------LATFASDIFSLGEVILEAILGSHLPSVGKN-SSWSQLRQGYIPLE-FCEGGSSSLRSVTSQMLDED 366 (524)
T ss_pred eChhhhcc------ccchHhhhcchhhhhHhhHhhcccccCCCC-CCccccccccCchh-hhcCcchhhhhHHHHhcCcc
Confidence 99999874 578899999999999999888776643310 11111111111111 12234566667999999999
Q ss_pred CCCCCCHHHHhcCcCCCCC
Q psy9090 151 PEHRPYMSELLEHPFITSL 169 (488)
Q Consensus 151 P~~Rps~~ell~hp~f~~~ 169 (488)
|-.|++.+.+++|+++.+.
T Consensus 367 ~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 367 PRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hhhhhHHHHHhccccccch
Confidence 9999999999999999753
No 452
>smart00090 RIO RIO-like kinase.
Probab=98.74 E-value=1.2e-08 Score=97.22 Aligned_cols=52 Identities=31% Similarity=0.420 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC-CeecccCCCCEEEccCCcEEEEecCCccccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENH-VIHRDLRGSNVLLTKDGEVKIVDFGLSRETA 55 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~vkL~Dfg~a~~~~ 55 (488)
+.++..++.||+.+|.+||++| ++||||||+||+++ ++.++|+|||.+....
T Consensus 147 ~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 147 EEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 4457789999999999999999 99999999999999 8899999999886543
No 453
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.63 E-value=5e-07 Score=89.51 Aligned_cols=156 Identities=16% Similarity=0.195 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccccC
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHKE 82 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~ 82 (488)
..-+.+..+.|+.+.+-||..|-+-+|+.++|+|+++++.|.|.|-....... ........+|.+.|.+||.-.-..-.
T Consensus 116 w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~-ng~~~~cpVg~~eftPPElQ~~~sf~ 194 (637)
T COG4248 116 WDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA-NGTLHLCPVGVSEFTPPELQTLPSFV 194 (637)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeecc-CCceEecccCccccCCHHHhcccccc
Confidence 45567889999999999999999999999999999999999999854332222 22344567899999999975421111
Q ss_pred CCCCCCccchhhhHHHHHHHhcC-CCCCCCCChH-----HHHHHHHh-------------CCCCCCCCCCCcCHHHHHHH
Q psy9090 83 VDGYDNRIDVWALGITAIELGDG-KPPFEDMHPT-----RALFQIVR-------------NPPPGLYRASNWSQHYVDFI 143 (488)
Q Consensus 83 ~~~~~~~~DiwslGvil~elltg-~~Pf~~~~~~-----~~~~~~~~-------------~~~~~~~~~~~~s~~~~~li 143 (488)
...-+...|.|.||+++++++.| ++||.+.... ..-..|-. .+.|..+...-+++.+..|.
T Consensus 195 g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF 274 (637)
T COG4248 195 GFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALF 274 (637)
T ss_pred ccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHH
Confidence 12345678999999999999876 9999653210 00001110 11122222233478889999
Q ss_pred HHhccc--CCCCCCCHHH
Q psy9090 144 AECLEK--NPEHRPYMSE 159 (488)
Q Consensus 144 ~~~L~~--dP~~Rps~~e 159 (488)
.+|+.. ++.-|||++.
T Consensus 275 ~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 275 QQAFTESGVATPRPTAKA 292 (637)
T ss_pred HHHhcccCCCCCCCCHHH
Confidence 999865 3568999754
No 454
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.61 E-value=5.2e-08 Score=93.00 Aligned_cols=45 Identities=29% Similarity=0.421 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccc
Q psy9090 9 ILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRE 53 (488)
Q Consensus 9 i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~ 53 (488)
.+.||+.+|.+||++||+||||||.|||++.++.++|+|||.+..
T Consensus 147 ~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 147 QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 467899999999999999999999999999999999999998754
No 455
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.60 E-value=5.9e-08 Score=89.84 Aligned_cols=51 Identities=27% Similarity=0.385 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccc
Q psy9090 5 HIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA 55 (488)
Q Consensus 5 ~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~ 55 (488)
....++.+++.++.++|+.|++||||||+||+++.++.++|+|||.+....
T Consensus 126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 456789999999999999999999999999999999999999999986543
No 456
>PRK10345 hypothetical protein; Provisional
Probab=98.55 E-value=8.4e-08 Score=89.43 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=37.7
Q ss_pred HHHHHHHHHHH-HHHHHCCCeecccCCCCEEEccC----CcEEEEecCCc
Q psy9090 7 AFILKEIITGM-VFLHENHVIHRDLRGSNVLLTKD----GEVKIVDFGLS 51 (488)
Q Consensus 7 ~~i~~qil~aL-~~LH~~givHrDlkp~NILl~~~----~~vkL~Dfg~a 51 (488)
..++.|++.++ +|||+++|+||||||+|||++.+ +.++|+||+.+
T Consensus 107 ~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 107 VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 35688888888 99999999999999999999743 37999995443
No 457
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.54 E-value=9.9e-08 Score=87.26 Aligned_cols=51 Identities=27% Similarity=0.361 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCccccc
Q psy9090 4 QHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA 55 (488)
Q Consensus 4 ~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~ 55 (488)
.+++.++.+++.++.++|. .||+||||||+||+++ ++.++|+|||.+....
T Consensus 114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence 4678899999999999999 9999999999999999 8999999999986543
No 458
>cd01363 Motor_domain Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes.
Probab=98.45 E-value=2.4e-07 Score=84.83 Aligned_cols=89 Identities=20% Similarity=0.265 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCc-hhhhHhhhcchhhhhhh-ccccCCCCCCC
Q psy9090 260 IYAVADSAYQDMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAA-KVGEKIEKCVNVIHAIG-NAGTPINQNST 337 (488)
Q Consensus 260 ~f~~~d~~~~~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~-~~~e~i~~~~~~leafg-na~t~~n~nss 337 (488)
+|+........++ ...+++|+..|++|+|||.+..--. ...|-+ ..-+.+.+.....+++. +|.|.+|++||
T Consensus 8 vf~~~~~~v~~~~-~G~n~~i~~yG~tGsGKT~Tm~G~~-----~~~Giip~~~~~~~~ll~~g~~~R~~~~t~~N~~SS 81 (186)
T cd01363 8 VFRDVGPLLQSAL-DGYNVCIFAYGQTGSGKTYTMEGKR-----EGAGIIPRTVTDVIDLMDKGNANRTTAATAMNEHSS 81 (186)
T ss_pred HHHHHHHHHHHHh-CCcceeEEEECCCCCcceEecCCCC-----CCCCcchHHHHHHHHHHhhccccccccccCCCCccC
Confidence 7887777777776 4689999999999999986643110 122322 12223667778889999 99999999999
Q ss_pred ccceeEEEEECCCCcee
Q psy9090 338 RHVLYMQVTFGSSGKLS 354 (488)
Q Consensus 338 rfgk~~~~~~~~~~~~~ 354 (488)
|+..+++|++.......
T Consensus 82 RsH~i~~i~v~~~~~~~ 98 (186)
T cd01363 82 RSHSVFRIHFGGKNALA 98 (186)
T ss_pred cccEEEEEEEEEeecCC
Confidence 99999999997655433
No 459
>KOG1243|consensus
Probab=98.43 E-value=1.2e-06 Score=91.73 Aligned_cols=98 Identities=22% Similarity=0.373 Sum_probs=73.7
Q ss_pred CHHHHHHHHHHHHHHHHHHH-HCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 2 SEQHIAFILKEIITGMVFLH-ENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH-~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
+...++..+.||+.||.||| +++++|++|.-+.|+++..|++||++|.++..............---.|..|+.+..
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~-- 179 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP-- 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc--
Confidence 35678899999999999997 678999999999999999999999999887554332211111222234666765532
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCC
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGK 106 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~ 106 (488)
-....|.|-|||++++++.|.
T Consensus 180 -----s~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 180 -----SEWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred -----cccchhhhhHHHHHHHHhCcc
Confidence 124579999999999999993
No 460
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.39 E-value=4.7e-07 Score=83.65 Aligned_cols=46 Identities=33% Similarity=0.555 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccc
Q psy9090 8 FILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRET 54 (488)
Q Consensus 8 ~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~ 54 (488)
.++.|++.+|.+||+.|++|||++|.||+++ ++.++++|||++...
T Consensus 94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 94 ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 6899999999999999999999999999999 889999999988653
No 461
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.37 E-value=5.8e-07 Score=83.83 Aligned_cols=48 Identities=33% Similarity=0.474 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccc
Q psy9090 5 HIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRE 53 (488)
Q Consensus 5 ~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~ 53 (488)
....++.+++.+|.+||+.|++|||++|.|||++ ++.++|+|||.+..
T Consensus 96 ~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 96 EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 4568899999999999999999999999999999 78999999998764
No 462
>KOG0601|consensus
Probab=98.34 E-value=3.4e-07 Score=94.53 Aligned_cols=154 Identities=21% Similarity=0.242 Sum_probs=111.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccC-CcEEEEecCCccccccccCccccccCCCcccc-chhhcc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKD-GEVKIVDFGLSRETANTFDKKKTFLGSPSWMA-PEIMRC 78 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~a-PE~l~~ 78 (488)
|.+...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.|||.++...- ......+...+.| +|++..
T Consensus 363 ~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~---~~~~~~~~~r~~p~~~~~~e 439 (524)
T KOG0601|consen 363 LDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF---SSGVFHHIDRLYPIAEILLE 439 (524)
T ss_pred cCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce---ecccccccccccccchhhcc
Confidence 4567788999999999999999999999999999999987 6778999998865221 1122233344442 555543
Q ss_pred cccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 79 GHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 79 ~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
...+..+.|++|||.-+.+..++.+.-.... ....+..+..+ .....+.++..+.+.++.+++..||++.
T Consensus 440 ----~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~---~~~~i~~~~~p---~~~~~~~~~q~~~kv~~~~~~~~~~l~~ 509 (524)
T KOG0601|consen 440 ----DYPHLSKADIFSLGLSVDEAITGSPLSESGV---QSLTIRSGDTP---NLPGLKLQLQVLLKVMINPDRKRRPSAV 509 (524)
T ss_pred ----ccccccccccccccccccccccCcccCcccc---cceeeeccccc---CCCchHHhhhhhhhhhcCCccccchhhh
Confidence 2567789999999999999998876433322 12222222222 2233447888999999999999999999
Q ss_pred HHhcCcCCC
Q psy9090 159 ELLEHPFIT 167 (488)
Q Consensus 159 ell~hp~f~ 167 (488)
++..|+-|.
T Consensus 510 ~l~~~~~~~ 518 (524)
T KOG0601|consen 510 ELSLHSEFY 518 (524)
T ss_pred hhcccchhh
Confidence 988876554
No 463
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.30 E-value=6.6e-07 Score=95.72 Aligned_cols=48 Identities=25% Similarity=0.494 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcccc
Q psy9090 6 IAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRET 54 (488)
Q Consensus 6 ~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~ 54 (488)
...++.|++.+|.+||+.|++||||||+|||+ .++.++|+|||+++..
T Consensus 430 ~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 430 NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred HHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 46789999999999999999999999999999 6789999999998653
No 464
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.26 E-value=1.4e-06 Score=80.05 Aligned_cols=54 Identities=26% Similarity=0.404 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHHHHHH-HHCCCeecccCCCCEEEccCCcEEEEecCCcccccc
Q psy9090 2 SEQHIAFILKEIITGMVFL-HENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETAN 56 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~L-H~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~ 56 (488)
+++++..+..|++.+|..| |+.|+||+||+|.||++. ++.+.++|||.+....+
T Consensus 122 ~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 122 NDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 3456778889999999998 899999999999999997 57899999998765543
No 465
>KOG0027|consensus
Probab=98.10 E-value=1.1e-07 Score=84.02 Aligned_cols=100 Identities=12% Similarity=0.150 Sum_probs=81.4
Q ss_pred CcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCC--------hhhHHHHHHHHHHHHhcCCCcEEEEc-ccccCC
Q psy9090 219 NHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNE--------PHIYAVADSAYQDMMHHEEAQHIVLA-GETLAG 289 (488)
Q Consensus 219 ~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~--------ph~f~~~d~~~~~~~~~~~~q~i~~s-gesgag 289 (488)
.....+.+++..+|+++.+.|+..+|...+......... -.+|.++|.+++|+|+..+++.++.+ |+.-
T Consensus 41 ~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~-- 118 (151)
T KOG0027|consen 41 PTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKL-- 118 (151)
T ss_pred CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcC--
Confidence 444566777889999999999999999877654332221 12999999999999999999999965 6522
Q ss_pred chhhHHHHHHHHHHhcCCCchhhhHhhhcch
Q psy9090 290 KTTSLKHLLKHLIFLGQGAAKVGEKIEKCVN 320 (488)
Q Consensus 290 kte~~k~i~~~~~~~~~g~~~~~e~i~~~~~ 320 (488)
..+.++.|++.++.++||.++|++|+.+|..
T Consensus 119 ~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 119 TDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred CHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 2789999999999999999999999999864
No 466
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.04 E-value=7.4e-06 Score=71.10 Aligned_cols=50 Identities=20% Similarity=0.275 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHC---CCeecccCCCCEEEccCCcEEEEecCCccc
Q psy9090 4 QHIAFILKEIITGMVFLHEN---HVIHRDLRGSNVLLTKDGEVKIVDFGLSRE 53 (488)
Q Consensus 4 ~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~vkL~Dfg~a~~ 53 (488)
.....++.+++.+|++||.. +++|+|++|.||+++..+.++++|||.+..
T Consensus 86 ~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 86 EEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 45678899999999999985 699999999999999989999999998753
No 467
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.00 E-value=3.1e-07 Score=80.36 Aligned_cols=114 Identities=12% Similarity=0.111 Sum_probs=88.9
Q ss_pred ccchhhHHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCCh-h---hHHHHHHHHHHHHhcCC
Q psy9090 201 TISEDNIVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEP-H---IYAVADSAYQDMMHHEE 276 (488)
Q Consensus 201 ~l~e~~l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~p-h---~f~~~d~~~~~~~~~~~ 276 (488)
.++...+..-++ -+.......++..++..+|. +...+++++|+.++........++ . +|+++|++.+|+|+.++
T Consensus 36 ~I~~~el~~ilr-~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~e 113 (160)
T COG5126 36 LIDRNELGKILR-SLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGE 113 (160)
T ss_pred CCcHHHHHHHHH-HcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHH
Confidence 344444444444 45566667788888888888 778899999999886554333222 2 99999999999999999
Q ss_pred CcEEEEc-ccccCCchhhHHHHHHHHHHhcCCCchhhhHhhhc
Q psy9090 277 AQHIVLA-GETLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKC 318 (488)
Q Consensus 277 ~q~i~~s-gesgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~ 318 (488)
+..|+-+ || ..-.|.+..|++.++.+++|.++|++|+..+
T Consensus 114 L~~vl~~lge--~~~deev~~ll~~~d~d~dG~i~~~eF~~~~ 154 (160)
T COG5126 114 LRRVLKSLGE--RLSDEEVEKLLKEYDEDGDGEIDYEEFKKLI 154 (160)
T ss_pred HHHHHHhhcc--cCCHHHHHHHHHhcCCCCCceEeHHHHHHHH
Confidence 9999865 56 2248999999999999999999999999865
No 468
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.86 E-value=2.3e-05 Score=70.18 Aligned_cols=46 Identities=28% Similarity=0.381 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHCCC-----eecccCCCCEEEccCCcEEEEecCCccc
Q psy9090 7 AFILKEIITGMVFLHENHV-----IHRDLRGSNVLLTKDGEVKIVDFGLSRE 53 (488)
Q Consensus 7 ~~i~~qil~aL~~LH~~gi-----vHrDlkp~NILl~~~~~vkL~Dfg~a~~ 53 (488)
..++.+++.+|+.||+.++ +|+|++|.||+++ ++.++++||+.+..
T Consensus 86 ~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 86 PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 4567899999999999985 9999999999999 67899999998753
No 469
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.81 E-value=3.4e-05 Score=74.68 Aligned_cols=50 Identities=20% Similarity=0.274 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEcc-------CCcEEEEecCCcc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTK-------DGEVKIVDFGLSR 52 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-------~~~vkL~Dfg~a~ 52 (488)
+.....++.+++..+.-||..||+|+|++|.|||++. ++.+.|+||+.+.
T Consensus 137 ~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 137 PRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 3466789999999999999999999999999999975 4679999999774
No 470
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.80 E-value=3.2e-05 Score=72.05 Aligned_cols=52 Identities=23% Similarity=0.347 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCC---cEEEEecCCccc
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDG---EVKIVDFGLSRE 53 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~---~vkL~Dfg~a~~ 53 (488)
+......++.++...+.-||.+||+|+|++|.|||++.++ .+.++||+.++.
T Consensus 116 ~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 116 DPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred chhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 3566788999999999999999999999999999999887 799999987653
No 471
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.76 E-value=4.2e-05 Score=68.51 Aligned_cols=45 Identities=31% Similarity=0.485 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccc
Q psy9090 8 FILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRE 53 (488)
Q Consensus 8 ~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~ 53 (488)
.+++.+-.-+.-||..||||+||.++||++...+ +.++|||++..
T Consensus 96 ~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 96 DLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred HHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 4778888889999999999999999999998654 99999999864
No 472
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.63 E-value=8.3e-05 Score=77.33 Aligned_cols=48 Identities=21% Similarity=0.405 Sum_probs=40.8
Q ss_pred HHHHHHHH-HHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccc
Q psy9090 8 FILKEIIT-GMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA 55 (488)
Q Consensus 8 ~i~~qil~-aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~ 55 (488)
.++.+++. .+..+|..|++|+|+||.||+++.+|.++++|||++....
T Consensus 260 ~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 260 ALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 45556655 4788999999999999999999999999999999986543
No 473
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.58 E-value=6.6e-05 Score=68.63 Aligned_cols=51 Identities=29% Similarity=0.559 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHH-HHHCCCeecccCCCCEEEccCCcEEEEecCCccccc
Q psy9090 4 QHIAFILKEIITGMVF-LHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETA 55 (488)
Q Consensus 4 ~~~~~i~~qil~aL~~-LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~ 55 (488)
++...++.+++..+.. +|..||+|+||++.|||++.+ .+.++|||.+....
T Consensus 106 ~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 106 EEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp STHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred hhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence 3567788899885555 689999999999999999876 89999999876543
No 474
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=97.47 E-value=6.5e-06 Score=65.35 Aligned_cols=63 Identities=14% Similarity=0.061 Sum_probs=53.2
Q ss_pred hhHHHHHH-HHHHHHhcCCCcEEEEc--ccccCCch-hhHHHHHHHHHHhcCCCchhhhHhhhcchhhh
Q psy9090 259 HIYAVADS-AYQDMMHHEEAQHIVLA--GETLAGKT-TSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIH 323 (488)
Q Consensus 259 h~f~~~d~-~~~~~~~~~~~q~i~~s--gesgagkt-e~~k~i~~~~~~~~~g~~~~~e~i~~~~~~le 323 (488)
.+|.++|+ +.+|.|+..+++.++-+ |+- -++ +.++.||+.+|.++||.|+|+||+.+|..+.=
T Consensus 12 ~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~--ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~ 78 (89)
T cd05022 12 SNFHKASVKGGKESLTASEFQELLTQQLPHL--LKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAK 78 (89)
T ss_pred HHHHHHhCCCCCCeECHHHHHHHHHHHhhhh--ccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 38999999 99999999999998854 431 124 78999999999999999999999999887643
No 475
>KOG3087|consensus
Probab=97.47 E-value=0.00021 Score=63.83 Aligned_cols=48 Identities=42% Similarity=0.595 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCc---EEEEecCCcccc
Q psy9090 7 AFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGE---VKIVDFGLSRET 54 (488)
Q Consensus 7 ~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~---vkL~Dfg~a~~~ 54 (488)
..++++|-+.|.-||.++|||+||..+||++..++. +.++|||++...
T Consensus 116 ~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 116 AELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred HHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 678889999999999999999999999999976653 589999997543
No 476
>KOG3741|consensus
Probab=97.43 E-value=0.0011 Score=68.04 Aligned_cols=130 Identities=15% Similarity=0.212 Sum_probs=95.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccc
Q psy9090 1 MSEQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGH 80 (488)
Q Consensus 1 L~e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 80 (488)
++|+.+|.|+.|+..||.++|+.|+..+-|.|.+||++.+.+++|...|......... + +.+.+
T Consensus 390 ~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~-------~-------~~le~-- 453 (655)
T KOG3741|consen 390 APEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP-------T-------EPLES-- 453 (655)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCC-------C-------cchhH--
Confidence 4789999999999999999999999999999999999998888888777654433221 0 11211
Q ss_pred cCCCCCCCccchhhhHHHHHHHhcCCCCC-CCCChHHH-HHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCCHH
Q psy9090 81 KEVDGYDNRIDVWALGITAIELGDGKPPF-EDMHPTRA-LFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPYMS 158 (488)
Q Consensus 81 ~~~~~~~~~~DiwslGvil~elltg~~Pf-~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ 158 (488)
..+-|.-.||.++..|.||..-- ........ +..+ ...+|.+++++|.-+...++.+ -++.
T Consensus 454 ------~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I----------~~~yS~D~rn~v~yl~s~~~~~-ksI~ 516 (655)
T KOG3741|consen 454 ------QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRI----------TTTYSTDLRNVVEYLESLNFRE-KSIQ 516 (655)
T ss_pred ------HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHh----------hhhhhHHHHHHHHHHHhcCccc-ccHH
Confidence 13568889999999999996431 11111111 1111 2457899999999999998876 7888
Q ss_pred HHhcC
Q psy9090 159 ELLEH 163 (488)
Q Consensus 159 ell~h 163 (488)
+++.+
T Consensus 517 ~llp~ 521 (655)
T KOG3741|consen 517 DLLPM 521 (655)
T ss_pred HHHHH
Confidence 88764
No 477
>PRK09902 hypothetical protein; Provisional
Probab=97.08 E-value=0.00099 Score=61.62 Aligned_cols=51 Identities=16% Similarity=0.225 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCc--EEEEecCCccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGE--VKIVDFGLSRE 53 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~--vkL~Dfg~a~~ 53 (488)
+..-..++.++...++-||+.|+.|+|+.+.||+++.+|. ++++||.-++.
T Consensus 127 ~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 127 DEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 4455789999999999999999999999999999987777 99999976543
No 478
>KOG1035|consensus
Probab=97.06 E-value=0.0017 Score=72.48 Aligned_cols=153 Identities=22% Similarity=0.363 Sum_probs=102.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeecccCCC---CEEEccCCcEEEE--ecCCccccccccCccccccCCCccccchhh
Q psy9090 2 SEQHIAFILKEIITGMVFLHENHVIHRDLRGS---NVLLTKDGEVKIV--DFGLSRETANTFDKKKTFLGSPSWMAPEIM 76 (488)
Q Consensus 2 ~e~~~~~i~~qil~aL~~LH~~givHrDlkp~---NILl~~~~~vkL~--Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l 76 (488)
+-+.++.+..++++||.|+|+....|.-+... +.-.+..+.+... ||+.++..... ........+..+.+||..
T Consensus 284 ~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~-~~~~~~~~~~~~~~~e~~ 362 (1351)
T KOG1035|consen 284 PLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDN-EKSFSDLLAEIRNADEDL 362 (1351)
T ss_pred CHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCc-ccchhhcCcccccccccc
Confidence 45678889999999999999997777766555 3444555666666 88877665443 222333445667788877
Q ss_pred cccccCCCCCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHhcccCCCCCCC
Q psy9090 77 RCGHKEVDGYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPGLYRASNWSQHYVDFIAECLEKNPEHRPY 156 (488)
Q Consensus 77 ~~~~~~~~~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps 156 (488)
... ........|+|++|..+..+..|..+-.... .....+ +........+++.+|+..++++|++
T Consensus 363 ~~~---~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~---~~~~~l---------~~~~~~~~~d~~~~~~~~~~~~Rl~ 427 (1351)
T KOG1035|consen 363 KEN---TAKKSRLTDLWCLGLLLLQLSQGEDISEKSA---VPVSLL---------DVLSTSELLDALPKCLDEDSEERLS 427 (1351)
T ss_pred ccc---cchhhhhhHHHHHHHHHhhhhhcCccccccc---chhhhh---------ccccchhhhhhhhhhcchhhhhccc
Confidence 541 1222344799999999999888765432111 111111 1111226778999999999999999
Q ss_pred HHHHhcCcCCCCCC
Q psy9090 157 MSELLEHPFITSLP 170 (488)
Q Consensus 157 ~~ell~hp~f~~~~ 170 (488)
+.+++.|+|.+.-.
T Consensus 428 ~~~ll~~~f~~~~~ 441 (1351)
T KOG1035|consen 428 ALELLTHPFLRFPT 441 (1351)
T ss_pred hhhhhhchhccccc
Confidence 99999999987543
No 479
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.05 E-value=0.00042 Score=73.36 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=31.6
Q ss_pred HHHCCCeecccCCCCEEEccCC----cEEEEecCCccccc
Q psy9090 20 LHENHVIHRDLRGSNVLLTKDG----EVKIVDFGLSRETA 55 (488)
Q Consensus 20 LH~~givHrDlkp~NILl~~~~----~vkL~Dfg~a~~~~ 55 (488)
+...|++|+|+||.||+++.+| .++++|||++....
T Consensus 276 if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 276 VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 4469999999999999999888 99999999986553
No 480
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=97.03 E-value=5.6e-05 Score=60.79 Aligned_cols=65 Identities=8% Similarity=0.067 Sum_probs=51.4
Q ss_pred hHHHHH-HHHHH-HHhcCCCcEEEEc--cc--ccCCchhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhh
Q psy9090 260 IYAVAD-SAYQD-MMHHEEAQHIVLA--GE--TLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHA 324 (488)
Q Consensus 260 ~f~~~d-~~~~~-~~~~~~~q~i~~s--ge--sgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~~~~lea 324 (488)
+|..+| +++.| .|+..+++.++-. |+ ++....+.++.||+.+|.++||.|+|+||+.++.++.=|
T Consensus 15 ~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~~~ 85 (93)
T cd05026 15 IFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALTVA 85 (93)
T ss_pred HHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH
Confidence 799888 78888 5999999987722 21 122235689999999999999999999999999887543
No 481
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=96.95 E-value=0.0013 Score=61.13 Aligned_cols=43 Identities=23% Similarity=0.428 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCcc
Q psy9090 9 ILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSR 52 (488)
Q Consensus 9 i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~ 52 (488)
+..+|.+++.-||+.|+.|+|.+|.|++++.+ .++++||+..+
T Consensus 140 ~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~~k~ 182 (229)
T PF06176_consen 140 LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQGKR 182 (229)
T ss_pred HHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECcccc
Confidence 44678889999999999999999999999854 59999997643
No 482
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=96.66 E-value=0.00016 Score=57.46 Aligned_cols=67 Identities=12% Similarity=0.117 Sum_probs=52.4
Q ss_pred hhHHHHH-HHHHH-HHhcCCCcEEEEc--cc-ccCCc-hhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhhh
Q psy9090 259 HIYAVAD-SAYQD-MMHHEEAQHIVLA--GE-TLAGK-TTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHAI 325 (488)
Q Consensus 259 h~f~~~d-~~~~~-~~~~~~~q~i~~s--ge-sgagk-te~~k~i~~~~~~~~~g~~~~~e~i~~~~~~leaf 325 (488)
.+|.++| +++.| +|+..+++.++-+ +. .|.-. .+.++.+|+.+|.+++|.++|+||+.++..+.=|.
T Consensus 12 ~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~~~~ 84 (88)
T cd05027 12 DVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVTTAC 84 (88)
T ss_pred HHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHH
Confidence 3899998 79999 6999999998833 00 22212 45599999999999999999999998887765443
No 483
>KOG0576|consensus
Probab=96.63 E-value=0.00054 Score=71.84 Aligned_cols=153 Identities=29% Similarity=0.456 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccccCCC
Q psy9090 5 HIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHKEVD 84 (488)
Q Consensus 5 ~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~ 84 (488)
+...+.+.-+.+++++|+.-=+|+| ||+..+ +..++.+|+......... ...+..+++.++|||+... .
T Consensus 337 ~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~t~~~~~~~~~pev~~~-----~ 405 (829)
T KOG0576|consen 337 QFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPRTAIGTPEPLAPEVIQE-----N 405 (829)
T ss_pred hhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc-ccccCCCCCCCCCchhhcc-----c
Confidence 4456667777889999988778888 776654 789999999887665542 4567789999999998876 6
Q ss_pred CCCCccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCC-CCCCCCCCCcCHHHH-HHHHHhcccCCCCCCCHHHHhc
Q psy9090 85 GYDNRIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNP-PPGLYRASNWSQHYV-DFIAECLEKNPEHRPYMSELLE 162 (488)
Q Consensus 85 ~~~~~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~-~li~~~L~~dP~~Rps~~ell~ 162 (488)
.+..+.|.|++|+-..++.-|.+|-.... .....+-..+ .+.+.....|++... ++...|+..-|..|+..-.++-
T Consensus 406 ~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacf 483 (829)
T KOG0576|consen 406 TIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACF 483 (829)
T ss_pred ccccCCCccCCCcchhhcCCCCCCCCCCc--cccCCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCcchhhHHH
Confidence 68889999999988788888887765421 1111110111 011111123433333 3778899999999999999999
Q ss_pred CcCCCCCC
Q psy9090 163 HPFITSLP 170 (488)
Q Consensus 163 hp~f~~~~ 170 (488)
|.+|...+
T Consensus 484 sKvfngCp 491 (829)
T KOG0576|consen 484 SKVFNGCP 491 (829)
T ss_pred HHHhccCc
Confidence 99997754
No 484
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=96.40 E-value=0.00022 Score=56.72 Aligned_cols=61 Identities=13% Similarity=0.149 Sum_probs=47.5
Q ss_pred hHHH-HHHHHHH-HHhcCCCcEEEEcccc-----cCCc-hhhHHHHHHHHHHhcCCCchhhhHhhhcchhh
Q psy9090 260 IYAV-ADSAYQD-MMHHEEAQHIVLAGET-----LAGK-TTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVI 322 (488)
Q Consensus 260 ~f~~-~d~~~~~-~~~~~~~q~i~~sges-----gagk-te~~k~i~~~~~~~~~g~~~~~e~i~~~~~~l 322 (488)
+|.. +|+++++ .|+..|.+.++ +.. +..+ ...++.||+.+|.++||.|+|+||+.++..+.
T Consensus 14 ~F~~y~~~dg~~~~Ls~~Elk~ll--~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 14 VFQKYAGKDGDSYQLSKTEFLSFM--NTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHhccCCCcCeECHHHHHHHH--HHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 6776 7777765 78888888777 322 2223 57899999999999999999999999887764
No 485
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=96.37 E-value=0.0063 Score=58.01 Aligned_cols=51 Identities=24% Similarity=0.392 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecccCCCCEEEccCCcEEEEecCCccc
Q psy9090 3 EQHIAFILKEIITGMVFLHENHVIHRDLRGSNVLLTKDGEVKIVDFGLSRE 53 (488)
Q Consensus 3 e~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkL~Dfg~a~~ 53 (488)
.+.+..++..|++-+.-+-..|+||+|+++-||+++.+|.+.++||--+..
T Consensus 201 ~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 201 VENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCccccc
Confidence 345667777788877777799999999999999999999999999965443
No 486
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=96.32 E-value=0.0019 Score=39.62 Aligned_cols=28 Identities=21% Similarity=0.167 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHhcCCCchhhhHhhhcch
Q psy9090 293 SLKHLLKHLIFLGQGAAKVGEKIEKCVN 320 (488)
Q Consensus 293 ~~k~i~~~~~~~~~g~~~~~e~i~~~~~ 320 (488)
+++.+++.+|.|+||.|+++||+.+|..
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 3789999999999999999999998764
No 487
>KOG0044|consensus
Probab=96.13 E-value=0.0002 Score=65.06 Aligned_cols=122 Identities=15% Similarity=0.164 Sum_probs=87.8
Q ss_pred HHHHHHhhhccCCcccccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChh---hHHHHHHHHHHHHhcCCCcEEEEc
Q psy9090 207 IVQELEERHNSKNHYSFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPH---IYAVADSAYQDMMHHEEAQHIVLA 283 (488)
Q Consensus 207 l~~~L~~r~~~~~~yt~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph---~f~~~d~~~~~~~~~~~~q~i~~s 283 (488)
...-+..-+.......|..-++...|-++++.|++.||+.++.-..+....+. +|++.|.++.|.|+..|.=.|+-+
T Consensus 49 F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~ 128 (193)
T KOG0044|consen 49 FREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQA 128 (193)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHH
Confidence 33334444445566667777888999999999999999988865555544433 899999999998888764332211
Q ss_pred -----cc-----ccCCchhhHHHHHHHHHHhcCCCchhhhHhhhcch---hhhhhhcc
Q psy9090 284 -----GE-----TLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKCVN---VIHAIGNA 328 (488)
Q Consensus 284 -----ge-----sgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~~~---~leafgna 328 (488)
|. -.-+.-+-+..+++.+|.|.||.++++||+..+.. +|++++.-
T Consensus 129 i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~~~ 186 (193)
T KOG0044|consen 129 IYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSILRALEQD 186 (193)
T ss_pred HHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHHHHHhhhc
Confidence 31 11234566888999999999999999999988764 77777643
No 488
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=95.92 E-value=0.015 Score=53.98 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=26.2
Q ss_pred CCCeecccCCCCEEEcc--CCcEEEEecCCccc
Q psy9090 23 NHVIHRDLRGSNVLLTK--DGEVKIVDFGLSRE 53 (488)
Q Consensus 23 ~givHrDlkp~NILl~~--~~~vkL~Dfg~a~~ 53 (488)
..++|+|++|.||+++. ++.+.++||+.+..
T Consensus 174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 35799999999999998 56789999987653
No 489
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=95.83 E-value=0.00086 Score=53.75 Aligned_cols=69 Identities=14% Similarity=0.220 Sum_probs=54.2
Q ss_pred hhHHHHH-HHHHHH-HhcCCCcEEEEc--cc-ccCCc-hhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhhhhc
Q psy9090 259 HIYAVAD-SAYQDM-MHHEEAQHIVLA--GE-TLAGK-TTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHAIGN 327 (488)
Q Consensus 259 h~f~~~d-~~~~~~-~~~~~~q~i~~s--ge-sgagk-te~~k~i~~~~~~~~~g~~~~~e~i~~~~~~leafgn 327 (488)
.+|.++| ++++|. |+..+.+.++-. |+ -|... .+.++.||++++.+++|.+++++|+..+.++.=|=++
T Consensus 13 ~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~~~~~ 87 (92)
T cd05025 13 NVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVACNN 87 (92)
T ss_pred HHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence 4999997 999994 999999988831 32 12222 5679999999999999999999999988877655443
No 490
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=95.73 E-value=0.022 Score=53.80 Aligned_cols=52 Identities=23% Similarity=0.350 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHH-CCCeecccCCCCEEEccCCcEEEEecCCcccccc
Q psy9090 4 QHIAFILKEIITGMVFLHE-NHVIHRDLRGSNVLLTKDGEVKIVDFGLSRETAN 56 (488)
Q Consensus 4 ~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~ 56 (488)
+++..+..++++.+.-|-. .++||+||+.-|||+. ++.+.++|+|-+....+
T Consensus 166 ~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~h 218 (268)
T COG1718 166 EEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECccccccCC
Confidence 3677888999999988877 9999999999999999 88999999998765543
No 491
>PTZ00183 centrin; Provisional
Probab=95.69 E-value=0.00055 Score=60.46 Aligned_cols=96 Identities=8% Similarity=0.036 Sum_probs=71.4
Q ss_pred cccCCceeeeCCCCCCCCCCchhhhhccCCCCCCC----ChhhHHHHHHHHHHHHhcCCCcEEEEc-ccccCCchhhHHH
Q psy9090 222 SFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDN----EPHIYAVADSAYQDMMHHEEAQHIVLA-GETLAGKTTSLKH 296 (488)
Q Consensus 222 t~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~----~ph~f~~~d~~~~~~~~~~~~q~i~~s-gesgagkte~~k~ 296 (488)
..+..++..+|+++.+.|.+.+|+........... -.++|+.+|.+..|.++..+...++.. |+ .-+.+.++.
T Consensus 53 ~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~--~l~~~~~~~ 130 (158)
T PTZ00183 53 EEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGE--TITDEELQE 130 (158)
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC--CCCHHHHHH
Confidence 34556677788888888999999876533211111 123899999999999998888877632 33 124778999
Q ss_pred HHHHHHHhcCCCchhhhHhhhcc
Q psy9090 297 LLKHLIFLGQGAAKVGEKIEKCV 319 (488)
Q Consensus 297 i~~~~~~~~~g~~~~~e~i~~~~ 319 (488)
++..++.+++|.|++++|+..+.
T Consensus 131 ~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 131 MIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred HHHHhCCCCCCcCcHHHHHHHHh
Confidence 99999999999999999987664
No 492
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=95.62 E-value=0.0011 Score=52.70 Aligned_cols=63 Identities=10% Similarity=0.110 Sum_probs=48.0
Q ss_pred hHHHHHH-HH-HHHHhcCCCcEEEEc----ccccCCchhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhh
Q psy9090 260 IYAVADS-AY-QDMMHHEEAQHIVLA----GETLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHA 324 (488)
Q Consensus 260 ~f~~~d~-~~-~~~~~~~~~q~i~~s----gesgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~~~~lea 324 (488)
+|.-++. ++ .|.|+..+++.++-. |+. -..+.+..||+.+|.+++|.++|+||+..+..+.=|
T Consensus 15 ~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k--~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~~~ 83 (88)
T cd05029 15 IFHKYSGREGDKNTLSKKELKELIQKELTIGSK--LQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALALI 83 (88)
T ss_pred HHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHH
Confidence 5666665 55 568888888887731 441 126789999999999999999999999998877544
No 493
>PTZ00184 calmodulin; Provisional
Probab=95.55 E-value=0.00076 Score=58.76 Aligned_cols=95 Identities=9% Similarity=0.125 Sum_probs=69.8
Q ss_pred ccCCceeeeCCCCCCCCCCchhhhhccCCCC----CCCChhhHHHHHHHHHHHHhcCCCcEEEEcccccCC-chhhHHHH
Q psy9090 223 FVGDVLLFINPNTHLNLYGTKYHFKYKFKSR----SDNEPHIYAVADSAYQDMMHHEEAQHIVLAGETLAG-KTTSLKHL 297 (488)
Q Consensus 223 ~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~----~~~~ph~f~~~d~~~~~~~~~~~~q~i~~sgesgag-kte~~k~i 297 (488)
.+..++..+|.++.+.+++.+|+........ ...-.++|..+|.+.+|.++..+...++ ...|.+ ..+.++.+
T Consensus 48 ~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l--~~~~~~~~~~~~~~~ 125 (149)
T PTZ00184 48 ELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVM--TNLGEKLTDEEVDEM 125 (149)
T ss_pred HHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHH--HHHCCCCCHHHHHHH
Confidence 4555667778888888999999976542211 1122359999999999998888877665 222322 36778899
Q ss_pred HHHHHHhcCCCchhhhHhhhcc
Q psy9090 298 LKHLIFLGQGAAKVGEKIEKCV 319 (488)
Q Consensus 298 ~~~~~~~~~g~~~~~e~i~~~~ 319 (488)
++.++.+++|.++++||+..++
T Consensus 126 ~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 126 IREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHhcCCCCCCcCcHHHHHHHHh
Confidence 9999999999999999997764
No 494
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=95.53 E-value=0.001 Score=49.41 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHHHHhcCCCcEEEEcccccCCchhhHHHHHHHHHHhcCCCchhhhHhhhcchhh
Q psy9090 259 HIYAVADSAYQDMMHHEEAQHIVLAGETLAGKTTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVI 322 (488)
Q Consensus 259 h~f~~~d~~~~~~~~~~~~q~i~~sgesgagkte~~k~i~~~~~~~~~g~~~~~e~i~~~~~~l 322 (488)
.+|+.+|.+.+|.++..+.+.++ ...|. ..+.++.|++.++.+++|.++++||+..+..+.
T Consensus 3 ~~F~~~D~~~~G~i~~~el~~~l--~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~ 63 (67)
T cd00052 3 QIFRSLDPDGDGLISGDEARPFL--GKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIA 63 (67)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHH--HHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 37888888888888888887766 22333 456789999999999999999999998876543
No 495
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=95.48 E-value=0.00045 Score=51.44 Aligned_cols=58 Identities=10% Similarity=0.119 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHHHhcCCCcEEEEcccccCC-----chhhHHHHHHHHHHhcCCCchhhhHhhhc
Q psy9090 259 HIYAVADSAYQDMMHHEEAQHIVLAGETLAG-----KTTSLKHLLKHLIFLGQGAAKVGEKIEKC 318 (488)
Q Consensus 259 h~f~~~d~~~~~~~~~~~~q~i~~sgesgag-----kte~~k~i~~~~~~~~~g~~~~~e~i~~~ 318 (488)
.+|..+|.+.+|.|+..+.+.++.. .|.. ..+.+..+++.+|.+++|.++++||+.+|
T Consensus 4 ~~F~~~D~d~~G~i~~~el~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 4 EAFKKFDKDGDGYISKEELRRALKH--LGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHSTTSSSEEEHHHHHHHHHH--TTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHcCCccCCCCHHHHHHHHHH--hcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 3788999999999998888877732 2211 14556677999999999999999999865
No 496
>KOG0028|consensus
Probab=95.30 E-value=0.00055 Score=59.02 Aligned_cols=96 Identities=9% Similarity=0.058 Sum_probs=74.9
Q ss_pred cccCCceeeeCCCCCCCCCCchhhhhccCCCCCCCChh-----hHHHHHHHHHHHHhcCCCcEEEEcccccCCc-hhhHH
Q psy9090 222 SFVGDVLLFINPNTHLNLYGTKYHFKYKFKSRSDNEPH-----IYAVADSAYQDMMHHEEAQHIVLAGETLAGK-TTSLK 295 (488)
Q Consensus 222 t~v~~il~~Inp~~~~~i~~~ef~~~~~~~~~~~~~ph-----~f~~~d~~~~~~~~~~~~q~i~~sgesgagk-te~~k 295 (488)
+.+..++..+|-.+.+.|.+++|...+..+..... +| +|.++|-+.+|.|+.+++..+. -|-|--- .+...
T Consensus 69 ~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d-t~eEi~~afrl~D~D~~Gkis~~~lkrva--keLgenltD~El~ 145 (172)
T KOG0028|consen 69 EEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD-TKEEIKKAFRLFDDDKTGKISQRNLKRVA--KELGENLTDEELM 145 (172)
T ss_pred HHHHHHHHhhhhccCceechHHHHHHHHHHHhccC-cHHHHHHHHHcccccCCCCcCHHHHHHHH--HHhCccccHHHHH
Confidence 44556677777788888999999987665533333 55 9999999999999998888666 3433222 67899
Q ss_pred HHHHHHHHhcCCCchhhhHhhhcch
Q psy9090 296 HLLKHLIFLGQGAAKVGEKIEKCVN 320 (488)
Q Consensus 296 ~i~~~~~~~~~g~~~~~e~i~~~~~ 320 (488)
.||.+++.+++|.++-+||+..|..
T Consensus 146 eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 146 EMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHhcccccccccHHHHHHHHhc
Confidence 9999999999999999999988753
No 497
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=95.23 E-value=0.0017 Score=52.21 Aligned_cols=62 Identities=11% Similarity=0.135 Sum_probs=49.1
Q ss_pred hhHHHHHH-HH-HHHHhcCCCcEEEEc--cc-ccCCc-hhhHHHHHHHHHHhcCCCchhhhHhhhcch
Q psy9090 259 HIYAVADS-AY-QDMMHHEEAQHIVLA--GE-TLAGK-TTSLKHLLKHLIFLGQGAAKVGEKIEKCVN 320 (488)
Q Consensus 259 h~f~~~d~-~~-~~~~~~~~~q~i~~s--ge-sgagk-te~~k~i~~~~~~~~~g~~~~~e~i~~~~~ 320 (488)
.+|.++|. ++ +|.|+..+.+.++-+ |+ -|... .+.++.|++.++.+++|.|+++||+.++..
T Consensus 12 ~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 12 LTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 38999997 87 699999999988732 22 23233 567999999999999999999999977654
No 498
>KOG1826|consensus
Probab=95.22 E-value=0.012 Score=67.81 Aligned_cols=143 Identities=13% Similarity=0.012 Sum_probs=95.9
Q ss_pred HHHHHHHHHCC-----CeecccCCCCEEEccCCcEEEEecCCccccccccCccccccCCCccccchhhcccccCCCCCCC
Q psy9090 14 ITGMVFLHENH-----VIHRDLRGSNVLLTKDGEVKIVDFGLSRETANTFDKKKTFLGSPSWMAPEIMRCGHKEVDGYDN 88 (488)
Q Consensus 14 l~aL~~LH~~g-----ivHrDlkp~NILl~~~~~vkL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~ 88 (488)
+....-+|+.. .+|+++|+-|.+|..+..+|++++|+.+...+.........+++.|+.|++... -.++.
T Consensus 1345 vl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~-----ik~t~ 1419 (2724)
T KOG1826|consen 1345 VLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE-----IKFTK 1419 (2724)
T ss_pred HhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH-----Hhhhh
Confidence 66666666532 789999999999999999999999999844444445566778899999998754 45677
Q ss_pred ccchhhhHHHHHHHhcCCCCCCCCChHHHHHHHHhCCCCC---CCCCCCcCHHHHHHHHHhcccCCCCCCCHHHHhcCcC
Q psy9090 89 RIDVWALGITAIELGDGKPPFEDMHPTRALFQIVRNPPPG---LYRASNWSQHYVDFIAECLEKNPEHRPYMSELLEHPF 165 (488)
Q Consensus 89 ~~DiwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~ 165 (488)
++|+|..|+.+|....|-.+|.. .++...++.... ...+.-.|.+.-.....+|-..-..||.-...+..+.
T Consensus 1420 rsdilr~s~~ly~rs~~n~~fi~-----flq~~Lkgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~ 1494 (2724)
T KOG1826|consen 1420 RSDILRRSLSLYLRSDGNAYFIF-----FLQPALKGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDH 1494 (2724)
T ss_pred HHHHHHHHHHHHHHhcccHHHHH-----HHHHHHcCcccccccccccccCCCcccHHHHHHHHHHhhhcchhhhhccccc
Confidence 79999999999999888877632 222223222111 1111122334444445555555667887777666555
Q ss_pred C
Q psy9090 166 I 166 (488)
Q Consensus 166 f 166 (488)
|
T Consensus 1495 ~ 1495 (2724)
T KOG1826|consen 1495 F 1495 (2724)
T ss_pred c
Confidence 5
No 499
>KOG0034|consensus
Probab=95.05 E-value=0.0014 Score=59.42 Aligned_cols=91 Identities=12% Similarity=0.056 Sum_probs=61.7
Q ss_pred eeeeCCCCCCC-CCCchhhhhccCCCCCCCChh-----hHHHHHHHHHHHHhcCCCcEEEEc--ccccC----CchhhHH
Q psy9090 228 LLFINPNTHLN-LYGTKYHFKYKFKSRSDNEPH-----IYAVADSAYQDMMHHEEAQHIVLA--GETLA----GKTTSLK 295 (488)
Q Consensus 228 l~~Inp~~~~~-i~~~ef~~~~~~~~~~~~~ph-----~f~~~d~~~~~~~~~~~~q~i~~s--gesga----gkte~~k 295 (488)
+...++.+.+. +++.+|+.....-.... +++ +|++.|.+.+|.|+..+.+.|+.. |++.. ....-+.
T Consensus 72 ~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~-~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d 150 (187)
T KOG0034|consen 72 IDRFDTDGNGDPVDFEEFVRLLSVFSPKA-SKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVD 150 (187)
T ss_pred HHHHhccCCCCccCHHHHHHHHhhhcCCc-cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 33344444444 88888886543221111 222 999999999999999999987754 54332 1133466
Q ss_pred HHHHHHHHhcCCCchhhhHhhhcc
Q psy9090 296 HLLKHLIFLGQGAAKVGEKIEKCV 319 (488)
Q Consensus 296 ~i~~~~~~~~~g~~~~~e~i~~~~ 319 (488)
.+|.++|.++||.|+++||-..+-
T Consensus 151 ~t~~e~D~d~DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 151 KTFEEADTDGDGKISFEEFCKVVE 174 (187)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHH
Confidence 678899999999999999976543
No 500
>KOG0027|consensus
Probab=95.00 E-value=0.0021 Score=56.71 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHHhcCCCcEEEEcccccCCc-hhhHHHHHHHHHHhcCCCchhhhHhhhcchhhhhhhccc
Q psy9090 259 HIYAVADSAYQDMMHHEEAQHIVLAGETLAGK-TTSLKHLLKHLIFLGQGAAKVGEKIEKCVNVIHAIGNAG 329 (488)
Q Consensus 259 h~f~~~d~~~~~~~~~~~~q~i~~sgesgagk-te~~k~i~~~~~~~~~g~~~~~e~i~~~~~~leafgna~ 329 (488)
.+|+.+|++..|.|+..++..++-+ .|... .+.++.++++++.+++|.|++++|+..|.+.++......
T Consensus 12 ~~F~~fD~d~~G~i~~~el~~~lr~--lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 12 EAFQLFDKDGDGKISVEELGAVLRS--LGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred HHHHHHCCCCCCcccHHHHHHHHHH--cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 3999999999999999999988833 33333 677999999999999999999999999887776555444
Done!