BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9091
(176 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 21 PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF 80
P R+L DE+DL L+D +EL ++G+G VY+ + G + +IKV + +
Sbjct: 7 PARSL--DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTGDE 63
Query: 81 IDDIKEEYRMLRDLSQHSNIPDFFGAYMKKH--QTHSEIWFVMQ 122
++IK+E ML+ S H NI ++GA++KK+ ++W VM+
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 129 PPRALKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEA 167
P R+L DE+DL L+D +EL ++G+G VY+
Sbjct: 7 PARSL--DEIDLSALRDPAGIFELVELVGNGTYGQVYKG 43
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
DRYE+ +IG G V +A D + V+IK+ K F++ + E R+L +++H
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVE-QEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 100 IPDFFGAYMKKH 111
++ ++K+H
Sbjct: 94 EMKYYIVHLKRH 105
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
DRYE+ +IG G V +A D + V+IK+ K F++ + E R+L +++H
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVE-QEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 100 IPDFFGAYMKKH 111
++ ++K+H
Sbjct: 113 EMKYYIVHLKRH 124
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
DRYE+ +IG G V +A D + V+IK+ K F++ + E R+L +++H
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVE-QEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 100 IPDFFGAYMKKH 111
++ ++K+H
Sbjct: 113 EMKYYIVHLKRH 124
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS 95
D YE+ ++IG G VY A D +N NK V+IK K+N F +D+ + R+LR+++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYD-KNANKNVAIK--KVNRMF-EDLIDCKRILREIT 79
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE----FIDDIKEEYRMLRDLS 95
D YEL VIGSG A V A KK + +++IN E +D++ +E + +
Sbjct: 10 DDYELQEVIGSGATAVVQAAY---CAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ-C 65
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H NI ++ +++ K E+W VM+
Sbjct: 66 HHPNIVSYYTSFVVK----DELWLVMK 88
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE----FIDDIKEEYRMLRDLS 95
D YEL VIGSG A V A KK + +++IN E +D++ +E + +
Sbjct: 15 DDYELQEVIGSGATAVVQAAY---CAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ-C 70
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H NI ++ +++ K E+W VM+
Sbjct: 71 HHPNIVSYYTSFVVK----DELWLVMK 93
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQH 97
G+++ LG IGSG ++Y + Q N++V+IK++ + + + E ++ R L
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQT-NEEVAIKLENVKTKH-PQLLYESKIYRILQGG 62
Query: 98 SNIPD--FFG 105
+ IP+ +FG
Sbjct: 63 TGIPNVRWFG 72
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQHSN 99
D Y+L +G G ++V+EA++ N N+KV +K+ K P + IK E ++L +L N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITN-NEKVVVKILK--PVKKNKIKREIKILENLRGGPN 93
Query: 100 I 100
I
Sbjct: 94 I 94
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 38 CGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE 79
G+RY LG IGSG D+Y D G ++V+IK++ + +
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAG-EEVAIKLECVKTK 45
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 146 CGDRYELGYVIGSGVCADVYEALD 169
G+RY LG IGSG D+Y D
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTD 28
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE 79
G+RY LG IGSG D+Y D G ++V+IK++ + +
Sbjct: 8 GNRYRLGRKIGSGSFGDIYLGTDIAAG-EEVAIKLECVKTK 47
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 147 GDRYELGYVIGSGVCADVYEALD 169
G+RY LG IGSG D+Y D
Sbjct: 8 GNRYRLGRKIGSGSFGDIYLGTD 30
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS 95
RYE+ +G G V E +D + G + V++K+ K + + + E ++L L+
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS 95
RYE+ +G G V E +D + G + V++K+ K + + + E ++L L+
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPE---FIDDIKEEYRMLRDLSQ 96
DRY +G G +VY+A+DT N+ V+IK ++ E E +L++L Q
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVT-NETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-Q 91
Query: 97 HSNIPDFFGAYMKKHQTH 114
H NI + H+ H
Sbjct: 92 HRNIIELKSVIHHNHRLH 109
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 68
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 69 RLLKHMKHENV 79
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 78
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 79 RLLKHMKHENV 89
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 68
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 69 RLLKHMKHENV 79
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 92
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 93 RLLKHMKHENVIGLLDVF 110
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 92
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 93 RLLKHMKHENV 103
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 26 TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 82
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 83 RLLKHMKHENV 93
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 68
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 69 RLLKHMKHENV 79
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G++ + V+K++ F I K YR L
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHR---VAVKKLSRPFQSIIHAKRTYREL 91
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 92 RLLKHMKHENV 102
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ IGSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 21 TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 78 RLLKHMKHENV 88
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 85 RLLKHMKHENVIGLLDVF 102
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRM 90
D D GD YE+ IG+G V A G + + ++KI P D + R
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQ---VAIKKI-PNAFDVVTNAKRT 101
Query: 91 LRDLS-----QHSNI 100
LR+L +H NI
Sbjct: 102 LRELKILKHFKHDNI 116
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 80 RLLKHMKHENVIGLLDVF 97
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 31 DLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRM 90
D D GD YE+ IG+G V A G + + ++KI P D + R
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQ---VAIKKI-PNAFDVVTNAKRT 100
Query: 91 LRDLS-----QHSNI 100
LR+L +H NI
Sbjct: 101 LRELKILKHFKHDNI 115
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 80 RLLKHMKHENV 90
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 75 RLLKHMKHENV 85
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 80 RLLKHMKHENVIGLLDVF 97
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 79 RLLKHMKHENV 89
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 79 RLLKHMKHENV 89
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 79 RLLKHMKHENVIGLLDVF 96
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 96 RLLKHMKHENVIGLLDVF 113
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 75 RLLKHMKHENV 85
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 78 RLLKHMKHENVIGLLDVF 95
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 70 RLLKHMKHENV 80
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 93 RLLKHMKHENVIGLLDVF 110
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 84 RLLKHMKHENV 94
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 84 RLLKHMKHENVIGLLDVF 101
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 80 RLLKHMKHENVIGLLDVF 97
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 92 RLLKHMKHENV 102
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 78 RLLKHMKHENV 88
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 69 RLLKHMKHENV 79
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 73 RLLKHMKHENVIGLLDVF 90
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 75 RLLKHMKHENV 85
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 73 RLLKHMKHENV 83
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 70
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 71 RLLKHMKHENV 81
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 78 RLLKHMKHENVIGLLDVF 95
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 75 RLLKHMKHENV 85
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 15 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 71
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 72 RLLKHMKHENVIGLLDVF 89
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 85 RLLKHMKHENVIGLLDVF 102
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 92 RDLS--QHSNIPDFFGAY 107
R L +H N+ +
Sbjct: 85 RLLKHMKHENVIGLLDVF 102
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 70 RLLKHMKHENV 80
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 39 GDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQ 74
G++Y LG IGSG D+Y + +G ++V+IK++
Sbjct: 8 GNKYRLGRKIGSGSFGDIYLGANIASG-EEVAIKLE 42
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V A DT+ G + + V+K++ F I K YR L
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 96 RLLKHMKHENV 106
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS 95
DRYE+ ++IG+G V EA D +K + ++KI F +D+ + R+LR+++
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKL---EKRVVAIKKILRVF-EDLIDCKRILREIA 104
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 34 NLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEF--IDDIKEEYRML 91
+ + +RY+ +GSG V + D ++G K I V+K++ F I K YR L
Sbjct: 45 TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLK---IAVKKLSRPFQSIIHAKRTYREL 101
Query: 92 RDLS--QHSNI 100
R L +H N+
Sbjct: 102 RLLKHMKHENV 112
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
D Y L IG G +V A+ ++ + K+ K E +D K+E +++ L
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-D 64
Query: 97 HSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H NI + + + +++I+ VM+
Sbjct: 65 HPNIIRLYETF----EDNTDIYLVME 86
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLS 95
D Y + ++IG G VY A D +N K V+IK K+N F +D+ + R+LR+++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYD-KNTEKNVAIK--KVNRMF-EDLIDCKRILREIT 77
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 37 DCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
D Y L IG G +V A+ ++ + K+ K E +D K+E +++ L
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-D 81
Query: 97 HSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H NI + + + +++I+ VM+
Sbjct: 82 HPNIIRLYETF----EDNTDIYLVME 103
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF- 68
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 69 DHPHIVKLIGVI-----TENPVWIIME 90
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF- 71
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 72 DHPHIVKLIGVI-----TENPVWIIME 93
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 67 -HPHIVKLIGVI-----TENPVWIIME 87
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK 75
DRYELG ++G G ++V+ A D ++ ++ V++KV +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRD-HRDVAVKVLR 46
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d
Mutant (Crystal Form 6)
Length = 311
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK 75
DRYELG ++G G ++V+ A D ++ ++ V++KV +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRD-HRDVAVKVLR 46
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF- 70
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 71 DHPHIVKLIGVI-----TENPVWIIME 92
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF- 73
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 74 DHPHIVKLIGVI-----TENPVWIIME 95
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF- 68
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 69 DHPHIVKLIGVI-----TENPVWIIME 90
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 31/57 (54%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
+RYE+ +G G V + +D + G +V++K+ K ++ + + E +L +++
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINE 89
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK 75
DRYELG ++G G ++V+ A D ++ ++ V++KV +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRD-HRDVAVKVLR 46
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF- 68
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 69 DHPHIVKLIGVI-----TENPVWIIME 90
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDD-IKEEYRMLRDLSQHSNIPDFFGA 106
IG G VY A+D G ++V+I+ + + + I E ++R+ +++ NI ++ +
Sbjct: 29 IGQGASGTVYTAMDVATG-QEVAIRQMNLQQQPKKELIINEILVMRE-NKNPNIVNYLDS 86
Query: 107 YMKKHQTHSEIWFVMQ 122
Y+ E+W VM+
Sbjct: 87 YL----VGDELWVVME 98
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDD-IKEEYRMLRDLSQHSNIPDFFGA 106
IG G VY A+D G ++V+I+ + + + I E ++R+ +++ NI ++ +
Sbjct: 28 IGQGASGTVYTAMDVATG-QEVAIRQMNLQQQPKKELIINEILVMRE-NKNPNIVNYLDS 85
Query: 107 YMKKHQTHSEIWFVMQ 122
Y+ E+W VM+
Sbjct: 86 YL----VGDELWVVME 97
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
+RYE+ +G G V E LD G +V++K+ + ++ + + E +L+ + +
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKE 75
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF- 96
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 97 DHPHIVKLIGVI-----TENPVWIIME 118
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDD-IKEEYRMLRDLSQHSNIPDFFGA 106
IG G VY A+D G ++V+I+ + + + I E ++R+ +++ NI ++ +
Sbjct: 28 IGQGASGTVYTAMDVATG-QEVAIRQMNLQQQPKKELIINEILVMRE-NKNPNIVNYLDS 85
Query: 107 YMKKHQTHSEIWFVMQ 122
Y+ E+W VM+
Sbjct: 86 YL----VGDELWVVME 97
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDD-IKEEYRMLRDLSQHSNIPDFFGA 106
IG G VY A+D G ++V+I+ + + + I E ++R+ +++ NI ++ +
Sbjct: 28 IGQGASGTVYTAMDVATG-QEVAIRQMNLQQQPKKELIINEILVMRE-NKNPNIVNYLDS 85
Query: 107 YMKKHQTHSEIWFVMQ 122
Y+ E+W VM+
Sbjct: 86 YL----VGDELWVVME 97
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
+RYE+ +G G V E LD G +V++K+ + ++ + + E +L+ + +
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKE 84
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF- 68
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 69 DHPHIVKLIGVI-----TENPVWIIME 90
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDD-IKEEYRMLRDLSQHSNIPDFFGA 106
IG G VY A+D G ++V+I+ + + + I E ++R+ +++ NI ++ +
Sbjct: 29 IGQGASGTVYTAMDVATG-QEVAIRQMNLQQQPKKELIINEILVMRE-NKNPNIVNYLDS 86
Query: 107 YMKKHQTHSEIWFVMQ 122
Y+ E+W VM+
Sbjct: 87 YL----VGDELWVVME 98
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
+RYE+ +G G V E LD G +V++K+ + ++ + + E +L+ + +
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKE 107
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 450 -HPHIVKLIGVI-----TENPVWIIME 470
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY----RMLRDLS 95
+R ELG IG G DV++ + N +++ ++ D ++E++ +R
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 96 QHSNIPDFFGAYMKKHQTHSEIWFVMQ 122
H +I G T + +W +M+
Sbjct: 450 -HPHIVKLIGVI-----TENPVWIIME 470
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIK---VQKINPEFIDDIKEEYR 89
D L +YE IG G V++A D +NG + V++K VQ E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 90 MLRDLS--QHSNIPDFF 104
+LR L +H N+ F
Sbjct: 64 VLRHLETFEHPNVVRLF 80
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKIN 77
D L +YE IG G V++A D +NG + V++K ++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ 48
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 33 DNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIK---VQKINPEFIDDIKEEYR 89
D L +YE IG G V++A D +NG + V++K VQ E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 90 MLRDLS--QHSNIPDFF 104
+LR L +H N+ F
Sbjct: 64 VLRHLETFEHPNVVRLF 80
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDI--KEEYRMLRDLS--QHSNI 100
+GSG V A+D ++G K + ++K++ F +I K YR L L QH N+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEK---VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 48 IGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDI--KEEYRMLRDLS--QHSNI 100
+GSG V A+D ++G K + ++K++ F +I K YR L L QH N+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEK---VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
>pdb|3OAA|D Chain D, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|E Chain E, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|F Chain F, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|L Chain L, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|M Chain M, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|N Chain N, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|T Chain T, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|U Chain U, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|V Chain V, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|BB Chain b, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|CC Chain c, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
pdb|3OAA|DD Chain d, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
Length = 459
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 18/20 (90%)
Query: 56 VYEALDTQNGNKKVSIKVQK 75
VY+AL+ QNGN+++ ++VQ+
Sbjct: 25 VYDALEVQNGNERLVLEVQQ 44
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
RYE+ VIG G V +A D ++ V++K+ + F EE R+L L +
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYD-HKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFID--DIKEEYR---MLRDLS 95
+YEL +G G V++++D + G + V+KI F + D + +R +L +LS
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGE---VVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 96 QHSNIPDFFGA 106
H NI +
Sbjct: 67 GHENIVNLLNV 77
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From
Mycobacterium Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From
Mycobacterium Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From
Mycobacterium Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From
Mycobacterium Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 25 LKPDELDLDNLQDCGDRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK 75
L P + DRYELG ++G G ++V+ A D + ++ V++KV +
Sbjct: 14 LVPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRL-HRDVAVKVLR 63
>pdb|3QNK|A Chain A, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|B Chain B, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|C Chain C, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|D Chain D, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
Length = 517
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 33 DNLQDCGDRYELGYVIGSGVCADVYEAL--DTQNGNKKVSIKVQKINPEFIDD 83
D ++ C + Y+LGY + G + Y ++ T NK++ VQ +P+ ++
Sbjct: 200 DVIKSCAEVYKLGYELVDGTTPEKYRSIWWTTNKDNKEIIFDVQYKSPDVYNN 252
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
RYE+ VIG G V +A D ++ V++K+ + F EE R+L L +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYD-HKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK 75
DRYELG ++G G ++V+ A D + ++ V++KV +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRL-HRDVAVKVLR 46
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a
Mutant
Length = 311
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 40 DRYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQK 75
DRYELG ++G G ++V+ A D + ++ V++KV +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRL-HRDVAVKVLR 46
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 41 RYELGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEYRMLRDLSQ 96
RYE+ VIG G V +A D ++ V++K+ + F EE R+L L +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYD-HKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY 88
L ++G G +VYE + T + +K+++ V+ + D KE++
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 72
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY 88
L ++G G +VYE + T + +K+++ V+ + D KE++
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 60
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 44 LGYVIGSGVCADVYEALDTQNGNKKVSIKVQKINPEFIDDIKEEY 88
L ++G G +VYE + T + +K+++ V+ + D KE++
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 56
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,725,134
Number of Sequences: 62578
Number of extensions: 245364
Number of successful extensions: 893
Number of sequences better than 100.0: 153
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 779
Number of HSP's gapped (non-prelim): 226
length of query: 176
length of database: 14,973,337
effective HSP length: 92
effective length of query: 84
effective length of database: 9,216,161
effective search space: 774157524
effective search space used: 774157524
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (23.1 bits)