BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9094
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VPH7|ERF1_DROME Eukaryotic peptide chain release factor subunit 1 OS=Drosophila
melanogaster GN=eRF1 PE=1 SV=2
Length = 438
Score = 322 bits (824), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/219 (74%), Positives = 173/219 (78%), Gaps = 36/219 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAEVAT LFITNDKPNIAGLILAGSADFKTELSQSDMFDP
Sbjct: 195 MEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQSKVIKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTLRAL
Sbjct: 255 DVSYGGENGFNQAIELAAESLQNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLRAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDR-VLHLTPEQEKDKSHFTDKETGVELELVEC 146
ELGSVETLICWENLDIQRYVLKNH+ S VLHLTPEQEKDKSHFTDKE+GVE+EL+E
Sbjct: 313 ELGSVETLICWENLDIQRYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESGVEMELIES 372
Query: 147 QPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
QPLLEWLANNYK FGATLEIITDKSQEGSQFVRGFGGIG
Sbjct: 373 QPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIG 411
>sp|Q9GR88|ERF1_POLMI Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa
misakiensis GN=ERF1 PE=2 SV=1
Length = 435
Score = 284 bits (726), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 163/218 (74%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFITND+PN+ GL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFITNDRPNVTGLVLAGSADFKTELSQSDMFDQRLQVKILKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGV+DTL+AL
Sbjct: 255 DVSYGGENGFNQAIELSAEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVDDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI WENLD RYVLKNH+T E+++L L P+QEKDK+HFTDK+TGVE+E+VE
Sbjct: 313 EMGAVEILIVWENLDTMRYVLKNHTTDEEKILFLKPDQEKDKTHFTDKDTGVEMEMVESC 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
LLEW ANNYK FG+TLEI+TD+SQEGSQFV+GFGGIG
Sbjct: 373 SLLEWFANNYKKFGSTLEIVTDRSQEGSQFVKGFGGIG 410
>sp|Q5U2Q7|ERF1_RAT Eukaryotic peptide chain release factor subunit 1 OS=Rattus
norvegicus GN=Etf1 PE=2 SV=3
Length = 437
Score = 279 bits (714), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 160/218 (73%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLDI RYVL T E+++L+LTPEQEKDKSHFTDKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|P62497|ERF1_RABIT Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus
cuniculus GN=ETF1 PE=1 SV=3
Length = 437
Score = 279 bits (714), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 160/218 (73%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLDI RYVL T E+++L+LTPEQEKDKSHFTDKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|Q8BWY3|ERF1_MOUSE Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus
GN=Etf1 PE=1 SV=4
Length = 437
Score = 279 bits (714), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 160/218 (73%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLDI RYVL T E+++L+LTPEQEKDKSHFTDKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|P62496|ERF1_MESAU Eukaryotic peptide chain release factor subunit 1 OS=Mesocricetus
auratus GN=ETF1 PE=1 SV=3
Length = 437
Score = 279 bits (714), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 160/218 (73%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLDI RYVL T E+++L+LTPEQEKDKSHFTDKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|P62495|ERF1_HUMAN Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens
GN=ETF1 PE=1 SV=3
Length = 437
Score = 279 bits (714), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 160/218 (73%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLDI RYVL T E+++L+LTPEQEKDKSHFTDKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|Q0VCX5|ERF1_BOVIN Eukaryotic peptide chain release factor subunit 1 OS=Bos taurus
GN=ETF1 PE=2 SV=3
Length = 437
Score = 279 bits (714), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 160/218 (73%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLDI RYVL T E+++L+LTPEQEKDKSHFTDKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|Q5R4C7|ERF1_PONAB Eukaryotic peptide chain release factor subunit 1 OS=Pongo abelii
GN=ETF1 PE=2 SV=3
Length = 437
Score = 276 bits (707), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 159/218 (72%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YF EISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFGEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLDI RYVL T E+++L+LTPEQEKDKSHFTDKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|P62498|ERF1_XENTR Eukaryotic peptide chain release factor subunit 1 OS=Xenopus
tropicalis GN=etf1 PE=2 SV=1
Length = 437
Score = 276 bits (705), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 160/218 (73%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLDI RYVL+ + + E++ L+LTPEQEKDKSHF DKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDIMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|P35615|ERF1_XENLA Eukaryotic peptide chain release factor subunit 1 OS=Xenopus laevis
GN=etf1 PE=2 SV=1
Length = 437
Score = 272 bits (695), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 159/218 (72%), Gaps = 35/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K +G+YFDEISQDTGKYCFGVEDTL+AL
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKF--IQEKKLIGRYFDEISQDTGKYCFGVEDTLKAL 312
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VE LI +ENLD RYVL+ + + E++ L+LTPEQEKDKSHF DKETG E EL+E
Sbjct: 313 EMGAVEILIVYENLDTMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDKETGQEHELIESM 372
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW AN+YK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 373 PLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>sp|O16520|ERF1_CAEEL Eukaryotic peptide chain release factor subunit 1 OS=Caenorhabditis
elegans GN=erf-1 PE=3 SV=2
Length = 559
Score = 256 bits (654), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 154/217 (70%), Gaps = 36/217 (16%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFD------------ 49
EKRHNYVRKVAE + FI NDK +AGLILAGSADFKTEL QSDMFD
Sbjct: 204 EKRHNYVRKVAENSVEQFIKNDKVTVAGLILAGSADFKTELGQSDMFDQRLQAKMIKTVD 263
Query: 50 ---------------------PVRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALE 88
V+F ++ K +G YFDEISQDTGKY FGV+DTL ALE
Sbjct: 264 IAYGGENGFNQAIELAADTLASVKF--IQEKKLIGGYFDEISQDTGKYVFGVKDTLAALE 321
Query: 89 LGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQP 148
+G++ETLICWENLDI RY +KN S ED +L+L P++EKDKSHFTD ETG ++E++E P
Sbjct: 322 MGAIETLICWENLDIVRYKMKN-SLGEDILLNLRPDEEKDKSHFTDSETGQDMEIIETMP 380
Query: 149 LLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
LLEW ANNYK+FGA LEI+TDKSQEG+QFVRGFGGIG
Sbjct: 381 LLEWFANNYKNFGAALEIVTDKSQEGAQFVRGFGGIG 417
>sp|P35614|ERF1Z_ARATH Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis
thaliana GN=ERF1-3 PE=2 SV=1
Length = 435
Score = 240 bits (613), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 150/220 (68%), Gaps = 37/220 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFI--TNDKPNIAGLILAGSADFKTELSQSDMFDP-------- 50
MEKRHNYVRK AE+AT +I +PN++GLILAGSADFKTELSQS++FDP
Sbjct: 193 MEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSELFDPRLQAKILN 252
Query: 51 -------------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLR 85
V+F ++ K +GKYF+EISQDTGKY FGVEDTL+
Sbjct: 253 VVDVSYGGENGFNQAIELSAEILSNVKF--IQEKKLIGKYFEEISQDTGKYVFGVEDTLK 310
Query: 86 ALELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVE 145
ALE+G+VETLI WENLDI RY LKN++T E + HL +QE ++S+F D ET ELE+ E
Sbjct: 311 ALEMGAVETLIVWENLDINRYELKNNTTGEIVIKHLGKDQENNQSNFHDAETNAELEVQE 370
Query: 146 CQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW AN YK FG TLE +T+KSQEGSQF RGFGGIG
Sbjct: 371 KMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIG 410
>sp|Q9LPV8|ERF1Y_ARATH Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis
thaliana GN=ERF1-2 PE=2 SV=1
Length = 434
Score = 239 bits (611), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 147/220 (66%), Gaps = 37/220 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFI--TNDKPNIAGLILAGSADFKTELSQSDMFDP-------- 50
MEKRHNYVRK AE+AT +I +PN++GLILAGSADFKTELSQS++FDP
Sbjct: 192 MEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSELFDPRLQAKILN 251
Query: 51 -------------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLR 85
V+F ++ K +GKYF+EISQDTGKY FGVEDTL+
Sbjct: 252 VVDVSYGGENGFNQAIELSAEILSNVKF--IQEKKLIGKYFEEISQDTGKYVFGVEDTLK 309
Query: 86 ALELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVE 145
ALE+G++ETLI WENLDI RY LKN +T E V H +QE D S+F D ET ELE+ E
Sbjct: 310 ALEMGAIETLIVWENLDINRYELKNSTTGEMVVKHFGKDQESDTSNFHDSETNAELEVQE 369
Query: 146 CQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PLLEW AN YK FG TLE +T+KSQEGSQF RGFGGIG
Sbjct: 370 KMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIG 409
>sp|Q39097|ERF1X_ARATH Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis
thaliana GN=ERF1-1 PE=2 SV=2
Length = 436
Score = 226 bits (577), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 144/220 (65%), Gaps = 37/220 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFI--TNDKPNIAGLILAGSADFKTELSQSDMFDP-------- 50
MEKRHNYVRK AE+AT +I +PN++GLILAGSADFKTELSQSDMFDP
Sbjct: 194 MEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLAAKILN 253
Query: 51 -------------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLR 85
V+F ++ K +GKYF+EISQDTGKY FGVEDTL
Sbjct: 254 VVDVSYGGENGFNQAIELSAEILANVKF--IQEKRLIGKYFEEISQDTGKYVFGVEDTLN 311
Query: 86 ALELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVE 145
ALE G++ETLI WENLDI RYV+KN +T E + HL EQE + +F ++ + L++ E
Sbjct: 312 ALESGAIETLIVWENLDINRYVMKNSATGETVIKHLNKEQEANTENFKVADSDLALDVEE 371
Query: 146 CQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
LLEWLAN Y+ FG LE +T+KSQEGSQF RGFGGIG
Sbjct: 372 KLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIG 411
>sp|Q9BMX0|ERF1_DICDI Eukaryotic peptide chain release factor subunit 1 OS=Dictyostelium
discoideum GN=erf1 PE=2 SV=2
Length = 441
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 145/212 (68%), Gaps = 36/212 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFD----------- 49
MEKRHNYVRKV+E+AT ++TNDKPN++GLILAGSADFKTEL SDMFD
Sbjct: 197 MEKRHNYVRKVSELATQFYVTNDKPNVSGLILAGSADFKTELGTSDMFDQRLREKIIKIV 256
Query: 50 ----------------------PVRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K + ++F+EI+QDTGKYCFG+ DTL+AL
Sbjct: 257 DVSYGGDNGFNQAIELSGEVLSSVKF--IQEKKLISQFFEEIAQDTGKYCFGIADTLKAL 314
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
+LG+ TLI WE+L+ RY+L+ T E++V+ L +Q KD S F DKE+G++ E+VE
Sbjct: 315 DLGAAHTLIVWESLETIRYLLR-LPTGEEKVIFLNKDQNKDASVFKDKESGLDYEIVEEM 373
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVR 179
P++EW ANNYK+FGA+LE +T+KSQEGSQF +
Sbjct: 374 PIVEWFANNYKNFGASLEFVTNKSQEGSQFCK 405
>sp|P12385|ERF1_YEAST Eukaryotic peptide chain release factor subunit 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SUP45 PE=1
SV=2
Length = 437
Score = 214 bits (545), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 143/215 (66%), Gaps = 33/215 (15%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP----------- 50
EKRHNYVRKVAEVA FITNDK N+ GLILAGSADFKT+L++S++FDP
Sbjct: 193 EKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFDPRLACKVISIVD 252
Query: 51 ------------VRFSP--------LKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELG 90
+ S ++ K + YFDEISQDTGK+C+G++DTL+AL+LG
Sbjct: 253 VSYGGENGFNQAIELSAEALANVKYVQEKKLLEAYFDEISQDTGKFCYGIDDTLKALDLG 312
Query: 91 SVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPLL 150
+VE LI +ENL+ RY K+ +E V+ + KDKS DK TG E+++V +PL+
Sbjct: 313 AVEKLIVFENLETIRYTFKDAEDNE--VIKFAEPEAKDKSFAIDKATGQEMDVVSEEPLI 370
Query: 151 EWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
EWLA NYK+FGATLE ITDKS EG+QFV GFGGIG
Sbjct: 371 EWLAANYKNFGATLEFITDKSSEGAQFVTGFGGIG 405
>sp|O59948|ERF1_PODAS Eukaryotic peptide chain release factor subunit 1 OS=Podospora
anserina GN=SU2 PE=3 SV=1
Length = 435
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 148/218 (67%), Gaps = 37/218 (16%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP----------- 50
EKRHNYVRKVAE+A FITNDK N+ G++LAGSADFK +L+ SDMFD
Sbjct: 197 EKRHNYVRKVAELAVQNFITNDKVNVMGIVLAGSADFKNDLNASDMFDQRLATKVIKVVD 256
Query: 51 ----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALE 88
V+F ++ K +GKYF+EISQDTG+ C+GVEDTL+ALE
Sbjct: 257 VSYGGENGFNQAIELASETLGNVKF--IQEKKLIGKYFEEISQDTGRICYGVEDTLKALE 314
Query: 89 LGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQE-KDKSHFTDKETGVELELVECQ 147
LG+VETLI +ENL++ R+VLK+ + +E ++H T +Q+ ++ F DKETG E+E+V +
Sbjct: 315 LGAVETLIVFENLEVTRWVLKDSNGAE-IIIHSTKQQDAANRDRFMDKETGQEMEVVSQE 373
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
LEW+A +YK FG TLE ++D+S EG+QFV+GFGGIG
Sbjct: 374 SFLEWIAEHYKDFGTTLEFVSDRSTEGNQFVKGFGGIG 411
>sp|Q5CG95|ERF1_CRYHO Eukaryotic peptide chain release factor subunit 1
OS=Cryptosporidium hominis GN=erf1 PE=3 SV=1
Length = 429
Score = 210 bits (535), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 142/210 (67%), Gaps = 35/210 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNY+RKVAE ATT+FITND+ N+A LILAGSADFK EL+QSD+FD
Sbjct: 191 MEKRHNYLRKVAETATTMFITNDQVNVAALILAGSADFKNELAQSDIFDQRLASKILKIV 250
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ K + K+FDE++QDTGKY +G+ +TL+AL
Sbjct: 251 DVSYGGDNGFNQAIELSSDALQNVKF--VQEKKLITKFFDEVAQDTGKYVYGINETLQAL 308
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G++E LI WENL+ +R V+KN ST E++V +P ++ D+S F D ETG EL+++E
Sbjct: 309 EMGAIELLIVWENLETKRMVVKNPSTGEEKVFLNSPTEQHDESKFKDPETGAELDVIEIL 368
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQF 177
PL EWL N Y+++GA LE +T+KSQEG+QF
Sbjct: 369 PLTEWLVNTYQNYGAQLEFVTNKSQEGNQF 398
>sp|Q5CD95|ERF1_BLEMU Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma
musculus GN=eRF1 PE=2 SV=1
Length = 436
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 142/216 (65%), Gaps = 33/216 (15%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFD----------- 49
ME R+NY+RKVAE + FI+NDK N+AGLI+AGSA+FK L QSD+FD
Sbjct: 195 MESRNNYLRKVAEQSVVQFISNDKVNVAGLIIAGSAEFKNVLVQSDLFDQRLAAKVLKIV 254
Query: 50 ------------PVRFSP--------LKNKNKMGKYFDEISQDTGKYCFGVEDTLRALEL 89
+ S ++ K M K+F+E++QDT KYC+GVEDT+R+L +
Sbjct: 255 DVAYGGENGFTQAIELSADTLSNIKFIREKKVMSKFFEEVAQDTKKYCYGVEDTMRSLIM 314
Query: 90 GSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPL 149
G++E ++ +ENL+ RYVLKN +T ++ L+LTPEQE++ +F E G ELE +E PL
Sbjct: 315 GAIEVILLFENLNFTRYVLKNPTTGAEKTLYLTPEQEENHDNFM--ENGEELEALEKGPL 372
Query: 150 LEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
EW+ +NY FGA LE ITD+SQEG+QFVRGFGG+G
Sbjct: 373 PEWIVDNYMKFGAGLEFITDRSQEGAQFVRGFGGLG 408
>sp|Q9BMM3|ERF1_BLEAM Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma
americanum GN=eRF1 PE=2 SV=1
Length = 436
Score = 202 bits (514), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 142/216 (65%), Gaps = 33/216 (15%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFD----------- 49
ME R+NY+RKVAE A FI++DK N+AGLI+AGSA+FK L QSD+FD
Sbjct: 195 MESRNNYLRKVAEQAVVQFISSDKVNVAGLIIAGSAEFKNVLVQSDLFDQRLAAKVLKIV 254
Query: 50 ------------PVRFSP--------LKNKNKMGKYFDEISQDTGKYCFGVEDTLRALEL 89
+ S ++ K M K+F+E++QDT KYC+GVEDT+++L +
Sbjct: 255 DVAYGGENGFTQAIELSADTLSNIKFIREKKVMSKFFEEVAQDTKKYCYGVEDTMKSLLM 314
Query: 90 GSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPL 149
G+VE ++ +ENL+ RYVLKN +T ++ L+LTPEQE++ +F E G ELE +E PL
Sbjct: 315 GAVEVILLFENLNFTRYVLKNPTTGIEKTLYLTPEQEENHDNFI--ENGEELEALEKGPL 372
Query: 150 LEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
EW+ +NY FGA LE ITD+SQEG+QFVRGFGG+G
Sbjct: 373 PEWIVDNYMKFGAGLEFITDRSQEGAQFVRGFGGLG 408
>sp|P79063|ERF1_SCHPO Eukaryotic peptide chain release factor subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sup45 PE=1 SV=1
Length = 433
Score = 201 bits (510), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 139/218 (63%), Gaps = 35/218 (16%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSPL----- 56
EKRHNYVRKVAE A FIT+DKPN+AG++LAGSADFKTEL QSD+FD S +
Sbjct: 193 EKRHNYVRKVAEGAVQHFITDDKPNVAGIVLAGSADFKTELGQSDLFDQRLQSRIIKTVD 252
Query: 57 --------------------------KNKNKMGKYFDEISQDTGKYCFGVEDTLRALELG 90
+ K + ++FDEIS D+GKYCFGV DT+ AL+ G
Sbjct: 253 VSYGGDAGFNQAIELAADTLSNVKYVQEKKLIQRFFDEISLDSGKYCFGVVDTMNALQEG 312
Query: 91 SVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQE-KDK--SHFTDKETGVELELVECQ 147
+VETL+C+ +LD+ RY KN S + ++T EQE KD S DK+TG E+ELV
Sbjct: 313 AVETLLCFADLDMIRYEFKN-SEGNPVITYMTKEQEEKDSTNSFLLDKDTGAEMELVSSM 371
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
L EWLA +YK +GA LE ++D+SQEG QFV+GFGGIG
Sbjct: 372 LLSEWLAEHYKDYGANLEFVSDRSQEGMQFVKGFGGIG 409
>sp|Q9BMX3|ERF1_OXYTR Eukaryotic peptide chain release factor subunit 1 OS=Oxytricha
trifallax GN=ERF1 PE=3 SV=1
Length = 445
Score = 199 bits (507), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 33/216 (15%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSPL----- 56
EKRHNY+RKVAE+A FITND+PN+ G++LAG+A FK EL+++DM D R P+
Sbjct: 201 EKRHNYLRKVAELANQNFITNDRPNVTGIVLAGNAAFKNELAETDMLDK-RLLPVICAVV 259
Query: 57 ---------------------------KNKNKMGKYFDEISQDTGKYCFGVEDTLRALEL 89
K + K+F+EI+ DTG FGV+DT++ALEL
Sbjct: 260 DVSYGGENGLNEAITLAAEALTNVKFVAEKKLVSKFFEEIALDTGMIVFGVDDTMKALEL 319
Query: 90 GSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPL 149
G+VET++ +E LDI RYVLKN + + ++L Q+KD +F D+ETG++L++V L
Sbjct: 320 GAVETVLLFEELDINRYVLKNPVKGDTKTIYLNSTQQKDSKYFKDRETGMDLDVVSEDSL 379
Query: 150 LEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
EWL +NY+++GA +E ITDKSQEG QFV+GFGGIG
Sbjct: 380 AEWLCHNYQNYGAQVEFITDKSQEGFQFVKGFGGIG 415
>sp|Q9BMM1|ERF1_STYMT Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia
mytilus GN=ERF1 PE=3 SV=1
Length = 445
Score = 199 bits (507), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 139/216 (64%), Gaps = 33/216 (15%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSPL----- 56
EKRHNY+RKVAE+A + FITNDKPN+ GL+LAG+A FK ELS++DM D R P+
Sbjct: 201 EKRHNYLRKVAELAGSNFITNDKPNVTGLVLAGNAGFKNELSETDMLDK-RLLPIIVSIV 259
Query: 57 ---------------------------KNKNKMGKYFDEISQDTGKYCFGVEDTLRALEL 89
K + K+F+EIS DTG FGV+DT++ALEL
Sbjct: 260 DVSYGGENGLNEAITLSADALTNVKFVAEKKLVSKFFEEISLDTGMIVFGVQDTMKALEL 319
Query: 90 GSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPL 149
G+VET++ +E L+I RYV+KN + R L L P Q+KD +F D+ +G++++++ L
Sbjct: 320 GAVETILLFEELEITRYVIKNPVKGDTRTLFLNPTQQKDSKYFKDQASGLDMDVISEDQL 379
Query: 150 LEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
EWL +NY+++ A +E ITDKSQEG QFV+GFGGIG
Sbjct: 380 AEWLCHNYQNYXAQVEFITDKSQEGYQFVKGFGGIG 415
>sp|Q9BMM0|ERF1_STYLE Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia
lemnae GN=ERF1 PE=3 SV=1
Length = 445
Score = 199 bits (506), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 139/216 (64%), Gaps = 33/216 (15%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSPL----- 56
EKRHNY+RKVAE+A + FITNDKPN+ GL+LAG+A FK ELS++DM D R P+
Sbjct: 201 EKRHNYLRKVAELAGSNFITNDKPNVTGLVLAGNAGFKNELSETDMLDK-RLLPIIVSIV 259
Query: 57 ---------------------------KNKNKMGKYFDEISQDTGKYCFGVEDTLRALEL 89
K + +F++IS DTG FGV+DT++ALEL
Sbjct: 260 DVSYGGENGLNEAITLSADALTNVKFVAEKKLVSTFFEQISLDTGMIVFGVQDTMKALEL 319
Query: 90 GSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPL 149
G+VET++ +E L+I RYV+KN + R L L P Q+KD +F D+ +G++++++ L
Sbjct: 320 GAVETILLFEELEITRYVIKNPVKGDTRTLFLNPTQQKDSKYFKDQASGLDMDVIAEDQL 379
Query: 150 LEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
EWL +NY+++GA +E ITDKSQEG QFV+GFGGIG
Sbjct: 380 AEWLCHNYQNYGAQVEFITDKSQEGYQFVKGFGGIG 415
>sp|Q5CD96|ERF1_DILMA Eukaryotic peptide chain release factor subunit 1 OS=Dileptus
margaritifer GN=eRF1 PE=2 SV=1
Length = 436
Score = 196 bits (497), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 137/216 (63%), Gaps = 35/216 (16%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSPL----- 56
E+RHNY+RKVAE T +FITND+PN+ GLILAGSADFKT+L++SD+FDP R SPL
Sbjct: 198 ERRHNYLRKVAETMTAVFITNDRPNVKGLILAGSADFKTDLNKSDLFDP-RLSPLVIKIV 256
Query: 57 ---------------------------KNKNKMGKYFDEISQDTGKYCFGVEDTLRALEL 89
K +G++FDEIS+DTG++ FG++DT+ LE
Sbjct: 257 DIAYGGENGFNQAIELSSDALRNVKFVHEKKIVGRFFDEISKDTGRFVFGLKDTMEGLEY 316
Query: 90 GSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPL 149
G+VE L+ +ENL+ R LK+++ + + P++E + E GVE E+++ PL
Sbjct: 317 GAVEVLMIFENLEHNRLSLKDNNNT--VTFKIFPKKETPSGNKFRDENGVEYEIIDNTPL 374
Query: 150 LEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
EW +NYK FG LEIITDKS EG+QFV+GFGGIG
Sbjct: 375 SEWFLDNYKKFGTHLEIITDKSSEGNQFVKGFGGIG 410
>sp|Q9NAX8|ERF1_TRYBB Eukaryotic peptide chain release factor subunit 1 OS=Trypanosoma
brucei brucei GN=ERF1 PE=3 SV=1
Length = 452
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 140/218 (64%), Gaps = 33/218 (15%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP------VRFS 54
ME+RHNY+RKVAE AT LFITND+PNI GL+LAGSA+FK L QSD+FDP V+
Sbjct: 196 MERRHNYLRKVAEGATQLFITNDRPNIVGLVLAGSAEFKEVLYQSDLFDPRLKAIVVKVV 255
Query: 55 PLKNKNKMG-------------------------KYFDEISQDTGKYCFGVEDTLRALEL 89
+ + +G +FD+I+ DT YCFGV+DTL+ LE
Sbjct: 256 DVAHPGDVGLNQAIDLAADALSGVKLVQEKKLLQGFFDQIACDTQLYCFGVQDTLKCLEA 315
Query: 90 GSVETLICWENLDIQRY-VLKNH-STSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
G+VETLI +E+L+I RY V+KN + E+ +H+ E+E +S+ +E+G +E +
Sbjct: 316 GAVETLIVYEDLNIYRYTVVKNRGADDEETFVHVMSEEEAKRSNIHMQESGKTRNEIEQE 375
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
++WLA NY+ FG LE+IT++SQEG+QFVRGFGGIG
Sbjct: 376 DFVDWLATNYRKFGCALELITNRSQEGTQFVRGFGGIG 413
>sp|Q5CD84|ERF1_LOXST Eukaryotic peptide chain release factor subunit 1 OS=Loxodes
striatus GN=eRF1 PE=2 SV=1
Length = 436
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 137/217 (63%), Gaps = 35/217 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
+EKRHNY++KVAEVA FI ND+ N+ G++LAG+A+FK EL+ ++ D
Sbjct: 193 LEKRHNYMKKVAEVAINCFIQNDRVNVLGIVLAGAAEFKNELAANEYLDQRIRAKVVTII 252
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F +K KN + K F+E++Q++ C+G+ DT++AL
Sbjct: 253 DVNYGGENGFNQAIELSQVQLQNVKF--IKEKNLITKLFEEVAQNSITVCYGLTDTMKAL 310
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+VETL+ WENL+ + LKN T E+ + L+P+Q +K+HF D+ EL +VE
Sbjct: 311 EMGAVETLVIWENLEFIWFKLKNPVTKEESTVVLSPQQATEKNHFQDEANQCELNIVERF 370
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGI 184
L EWL +NYK++GA LE +TD+SQEGSQFV+GFGGI
Sbjct: 371 ALTEWLIDNYKNYGARLEFVTDRSQEGSQFVKGFGGI 407
>sp|Q5CD97|ERF1_DIDNA Eukaryotic peptide chain release factor subunit 1 OS=Didinium
nasutum GN=eRF1 PE=2 SV=1
Length = 437
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 138/219 (63%), Gaps = 38/219 (17%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSPL---- 56
+EKR NY+RKVAE T FITND PN+ GLILAGSA+FK +L +SD+FD +R P+
Sbjct: 197 IEKRRNYLRKVAESTTACFITNDMPNVKGLILAGSAEFKNDLQKSDLFD-LRLQPIVIKL 255
Query: 57 ----------------------------KNKNKMGKYFDEISQDTGKYCFGVEDTLRALE 88
K +GK+FDEI++DTGKY FG++DTL A++
Sbjct: 256 VDISYGGENGFNQAIELSSDALKSVKFIHEKKVIGKFFDEIAKDTGKYVFGIKDTLEAMD 315
Query: 89 LGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEK--DKSHFTDKETGVELELVEC 146
+GSV+ LI +ENL+ R +L++ + D +++ T + K S + ++ TGVE E+++
Sbjct: 316 MGSVDILIIYENLEYNRLILRD---ANDNIVNETLHKNKCPSGSKYKNETTGVEYEVLDN 372
Query: 147 QPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
PL EW +NYK + + LEI+TDKS EGSQF++GFGGIG
Sbjct: 373 IPLTEWFMDNYKKYVSHLEIVTDKSSEGSQFLKGFGGIG 411
>sp|Q9U8U5|ERF1_TETTH Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena
thermophila GN=ERF1 PE=2 SV=1
Length = 435
Score = 163 bits (412), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 122/218 (55%), Gaps = 37/218 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
+EKRHNY+RKV EVAT FI+ DK N+ GL+LAGS DFK ELS + MFDP
Sbjct: 194 VEKRHNYLRKVCEVATQTFISQDKINVQGLVLAGSGDFKNELSTTQMFDPRLACKIIKIV 253
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V+F ++ KN + K+FD I+ D+G +GV+DT++ L
Sbjct: 254 DVSYGGENGLNQAIELAQESLTNVKF--VQEKNVISKFFDCIAIDSGTVVYGVQDTMQLL 311
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
G +E ++C+E L R KN T + + + P + + HF D E ELE +E +
Sbjct: 312 LDGVIENILCFEELTTLRVTRKNKVTEQITHIFIPPNELNNPKHFKDGEH--ELEKIEVE 369
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
L EWLA +Y FGA L ITDKS EG QFV+GF GIG
Sbjct: 370 NLTEWLAEHYSEFGAELYFITDKSAEGCQFVKGFSGIG 407
>sp|Q9NCP1|ERF1_GIAIN Eukaryotic peptide chain release factor subunit 1 OS=Giardia
intestinalis GN=ERF1 PE=3 SV=1
Length = 457
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 126/225 (56%), Gaps = 41/225 (18%)
Query: 2 EKRHNYVRKVAEVATTLFITN-----DKPNIAGLILAGSADFKTELSQSDMFDP------ 50
E RHNYVRKVAE A +LFI++ +KP ++GLIL GSADFK LS S +FD
Sbjct: 201 EARHNYVRKVAERANSLFISSGPTGTNKPIVSGLILGGSADFKNVLSTSAIFDQRLQSIV 260
Query: 51 -----VRFSPLKNKNK--------------------MGKYFDEISQDTGKYCFGVEDTLR 85
+ + + N+ + ++ + I++DT + CFG+ DT+R
Sbjct: 261 MKQIDINYGGEQGFNQAIEMAGDTLKDVKLIQEVKLLTEFTENIAKDTKRVCFGITDTIR 320
Query: 86 ALELGSVETLICWENLDIQRYVLK---NHSTSEDRVLHLTPEQEKDKSHFTDKETG--VE 140
LE+ +VE LI W++L R L+ N TS + +L Q + + + G V+
Sbjct: 321 CLEMSAVEKLIVWDDLPYHRVTLQCVINGETSAPVIKYLLKSQMSNPKYLREVINGEEVQ 380
Query: 141 LELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
L+++ Q LLEW +NYK++GA+LE IT++S EG+QF GFGGIG
Sbjct: 381 LDIMGDQLLLEWFVDNYKNYGASLEFITNRSAEGTQFCSGFGGIG 425
>sp|O29048|RF1_ARCFU Peptide chain release factor subunit 1 OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=prf1 PE=3 SV=1
Length = 407
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 36/212 (16%)
Query: 5 HNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTEL---------------------- 42
H + +KV E+A+ + K + G+++ G + K E
Sbjct: 190 HEFYKKVGEMASEALLPY-KDKLIGILIGGPSPTKEEFYEGEYLHHELQKKVLGLFDVGY 248
Query: 43 -SQSDMFDPVRFSP--------LKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVE 93
+S +++ V + ++ KN M ++ E+++D G +G E+ R +ELG+V+
Sbjct: 249 TDESGLYELVEKAKDVLQEVDIIREKNLMQRFLKEVARD-GLAAYGEEEVRRYIELGAVD 307
Query: 94 TLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWL 153
TL+ E+L +R +K + + +T + +K F + E VE+E VE + ++ L
Sbjct: 308 TLLLSEDLRYER--VKYRCPKCGKEVEVTVREGIEKPPFCE-EDNVEMEEVERRDIVLEL 364
Query: 154 ANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ +S GA +E ++ +S+EG + FGGI
Sbjct: 365 SELAESTGAKVEFLSTESEEGEMLYKAFGGIA 396
>sp|Q9V151|RF1_PYRAB Peptide chain release factor subunit 1 OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=prf1 PE=3 SV=2
Length = 414
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 34/215 (15%)
Query: 5 HNYVRKVAEVATTLFITN-DKPNIAGLILAGSADFKTELSQSDMF--------------- 48
H +++++ E A +F+ +K + G+I+ G K + + D
Sbjct: 193 HEFMKRIGEHANRVFLPLLEKGELKGIIVGGPGPTKEDFVEGDYLHHELKKKIIGVVDIS 252
Query: 49 ---------------DPVR-FSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSV 92
D +R ++ K + ++ + +DTG +G + RALE+G+V
Sbjct: 253 YHGEYGLRELVEKASDILRDHEVIREKKLVNEFLKHVVKDTGLATYGEREVRRALEIGAV 312
Query: 93 ETLICWENLDIQRYVLK-NHSTSEDRVLHLTPEQEKDKSHFTD-KETGVELELVECQPLL 150
+TL+ E D R K NH E+ E E K T + G + +E +
Sbjct: 313 DTLLISEGYDKVRVRAKCNHCGWEELKTMSEEEFEVYKKKLTRCPKCGSQNLTIEKWDVA 372
Query: 151 EWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
E L + G+ +EII+ ++EG QF R FGG+G
Sbjct: 373 EELIKMAEEAGSDVEIISLDTEEGQQFYRAFGGLG 407
>sp|Q8U0J4|RF1_PYRFU Peptide chain release factor subunit 1 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=prf1
PE=3 SV=1
Length = 420
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 5 HNYVRKVAEVATTLFITN-DKPNIAGLILAGSADFKTELSQSDMF--------------- 48
H +++++ E A +F+ + + G+I+ G K E + D
Sbjct: 196 HEFMKRIGEHANRIFLPLLESGELKGIIVGGPGPTKEEFVEGDYLHHELKKKIIGIVDIS 255
Query: 49 ---------------DPVR-FSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSV 92
D +R ++ +N + ++ I +DTG +G + +ALELG+V
Sbjct: 256 YHGEYGLRELVAKAADILRDHEVIRERNLVNEFLKHIVKDTGLATYGEREVRKALELGAV 315
Query: 93 ETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEK--DKSHFTDKETGVELELVECQPLL 150
+TL+ E D R +K ++ + + ++ E+ + K T + G + E +
Sbjct: 316 DTLLISEGYDKVRVHVKCNNCGWEELKTMSEEEYEAYKKRIQTCPKCGSQNLTFEKWEVA 375
Query: 151 EWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
E L + G+ +EII+ ++EG QF R FGG+G
Sbjct: 376 EELIKIAEEAGSNVEIISLDTEEGQQFYRAFGGLG 410
>sp|A5ULL8|RF1_METS3 Peptide chain release factor subunit 1 OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=prf1 PE=3
SV=1
Length = 412
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 56 LKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTSE 115
++ K + K+ E+ +D G +G + L +G+V+TL+ E+L R V K S
Sbjct: 275 MQEKKVVQKFLHELVKDKGLASYGEREVRTNLIMGAVDTLLLSEDLTAMRKVFKCPSCGN 334
Query: 116 DRVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGS 175
+ + + + E DK G L+ Q L+E + + +E+I+ +++EG
Sbjct: 335 EEEITVKSQSEADKLEKPCSNCGEILKEESSQTLIEDFVEKAEEMNSEVELISTETEEGM 394
Query: 176 QFVRGFGGIG 185
Q +R FGG+
Sbjct: 395 QLLRAFGGVA 404
>sp|Q12V98|RF1_METBU Peptide chain release factor subunit 1 OS=Methanococcoides burtonii
(strain DSM 6242) GN=prf1 PE=3 SV=1
Length = 414
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 36/214 (16%)
Query: 5 HNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMF---------------- 48
H++ +++ + A+ +F+ ++ + G+++ G + K E + F
Sbjct: 193 HDFYKRIGDAASEVFLAVEQKDFEGVLIGGPSPTKEEFEAGNFFHHEIEKKVLDLFDVAY 252
Query: 49 -DPVRFSPLKN--------------KNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVE 93
D S L N K M ++F E+ D+GK +G ++ L +G+V+
Sbjct: 253 TDESGLSELVNAASERLEDLDLMVEKKLMQQFFRELVSDSGKATYGEDNVRENLIIGAVD 312
Query: 94 TLICWENLDIQRYVLKNHSTSEDRVLHLTPE-QEKDKSHFTDK--ETGVELELVECQPLL 150
L+ E+L R +K TS D + E + D S T + G LE+ E ++
Sbjct: 313 ILLISEDLRAVRETVK--CTSCDYEQKTSREFKPGDSSSPTGNCPKCGSYLEITEKVDVV 370
Query: 151 EWLANNYKSFGATLEIITDKSQEGSQFVRGFGGI 184
+ L+ G +E I+ +EGSQ ++ FGG+
Sbjct: 371 DQLSEICDQMGTRVEFISTDFEEGSQLLKAFGGV 404
>sp|O59264|RF1_PYRHO Peptide chain release factor subunit 1 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=prf1 PE=3 SV=1
Length = 417
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 34/215 (15%)
Query: 5 HNYVRKVAEVATTLFITN-DKPNIAGLILAGSADFKTELSQSDMF--------------- 48
H +++++ E A F+ +K + G+I+ G K E + +
Sbjct: 196 HEFMKRIGEHANRAFLPLLEKGELKGIIIGGPGPTKEEFVEGEYLHHELKKKILGVVDIS 255
Query: 49 ---------------DPVR-FSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSV 92
D +R ++ K + ++ + +DTG +G + RALE+G+V
Sbjct: 256 YHGEYGLRELVEKASDILRDHEVIREKKLVNEFLKHVVKDTGLATYGEREVRRALEIGAV 315
Query: 93 ETLICWENLDIQRYVLK-NHSTSEDRVLHLTPEQEKDKSHFTD-KETGVELELVECQPLL 150
+ L+ E + R +K NH E+ E E + T + G + +E +
Sbjct: 316 DVLLISEGYNKVRVRVKCNHCGWEELKTMSEEEYEVYRKKITKCPKCGSQNLTIEKWDVA 375
Query: 151 EWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
E L + G+ +EII+ ++EG QF R FGG+G
Sbjct: 376 EELIKMAEEAGSDVEIISLDTEEGQQFYRAFGGLG 410
>sp|A6UPD8|RF1_METVS Peptide chain release factor subunit 1 OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=prf1 PE=3 SV=1
Length = 419
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 100/221 (45%), Gaps = 43/221 (19%)
Query: 5 HNYVRKVAEVATTLFI-TNDKPNIAGLILAGSADFKTELSQSDMF--------------- 48
H ++ ++ E +T F+ ++ + GL++ G + K E ++ D
Sbjct: 195 HQFMVRIGEYSTESFMPILEEKKLRGLLIGGPGNTKNEFAEKDFLHHELKKKIIDTFDLC 254
Query: 49 ---------------DPVR-FSPLKNKNKMGKYFDE-ISQDTGKYCFGVEDTLRALELGS 91
D +R +K KN + K+F E I D G +G +R LE+G+
Sbjct: 255 YTEEFGIRELLEKASDLLRDLDLMKEKNLIQKFFKELIKDDGGLSAYGESQVMRYLEMGA 314
Query: 92 VETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTD-------KETGVELELV 144
++TLI E++++ R +K ++ + + +++ + +D F D K+ + +
Sbjct: 315 IDTLIVTEDIELTRVTIKCNNCNFKQEINV---KTRDLYKFEDEVKTKICKQCSGSMYIE 371
Query: 145 ECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
E + ++E+L+ + + +++ ++EGSQ + F G+
Sbjct: 372 EEKDIIEYLSELCNIHNSDIVVVSTDTEEGSQISKAFKGMA 412
>sp|B6YU52|RF1_THEON Peptide chain release factor subunit 1 OS=Thermococcus onnurineus
(strain NA1) GN=prf1 PE=3 SV=1
Length = 415
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 40/218 (18%)
Query: 5 HNYVRKVAEVATTLFITN-DKPNIAGLILAGSADFKTELSQSD-MFDPVR---------- 52
H +++++AE A F+ +K + G+I+ G K E D + +R
Sbjct: 193 HEFMKRIAEHAAKAFLPLLEKGELKGIIIGGPGPTKEEFVDGDYLHHELRKKVIGVVDIS 252
Query: 53 --------------------FSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSV 92
+K + + +F + +DTG +G + +ALELG+V
Sbjct: 253 YHGEYGLRELVEKASDILSEHEAVKERKLIQDFFRHLVKDTGLITYGEREVRKALELGAV 312
Query: 93 ETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQE-----KDKSHFTDKETGVELELVECQ 147
+TL+ E D R K ++ + L EQE K +H + G + E
Sbjct: 313 DTLLISEGYDKVRVKAKCNACGWEE-LKTMSEQEFHVYKKKLTHCP--KCGSQNISFEKW 369
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ E L + GA +EII+ ++EG QF + FGG+G
Sbjct: 370 DVAEELIKLAEESGAEVEIISLDTEEGQQFYKAFGGLG 407
>sp|O26964|RF1_METTH Peptide chain release factor subunit 1 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=prf1 PE=3 SV=1
Length = 407
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 56 LKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTSE 115
++ K + ++ E+ + G +G + + L++G+VE L+ E+L QR + S
Sbjct: 275 MREKKLVQRFLRELINEDGLASYGEREVRQHLQMGAVEVLLLSEDLKYQRGTYECASCGH 334
Query: 116 DRVLHLTPEQEKDKSHFTDKET----GVELELVECQPLLEWLANNYKSFGATLEIITDKS 171
EK D ET ++ L + + +++ L + G +EII+ ++
Sbjct: 335 --------RMEKTGRDLPDTETCPSCNDQMRLSDRRDMIDDLVEMAEEVGTEVEIISTET 386
Query: 172 QEGSQFVRGFGGIG 185
+EG Q +R FGGIG
Sbjct: 387 EEGMQLLRAFGGIG 400
>sp|Q9HKR2|RF1_THEAC Peptide chain release factor subunit 1 OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=prf1 PE=3 SV=1
Length = 417
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 57 KNKNKMGKYFDEISQDTGKYCFGVEDTLR-ALELGSVETLICWENLDIQRYVLKNHSTSE 115
K K+ M ++ E+ + G E +R ALE V+ L+ E L RY + +
Sbjct: 279 KEKDLMNRFLREVRKPDGGLAIYGEQAIRDALEQKMVDLLLISEGLRKVRYTYRCPTCQA 338
Query: 116 DRVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGS 175
+ LT QE ++ +K+ G +ELV +E L K GA +EII+D+S+EG
Sbjct: 339 E----LTLNQEPNEWPVCEKD-GTPMELVAEDDFIEDLYRLAKESGAQVEIISDQSEEGK 393
Query: 176 QFVRGFGGIG 185
+ FGG+
Sbjct: 394 LLKQAFGGMA 403
>sp|P61731|RF1_METMP Peptide chain release factor subunit 1 OS=Methanococcus maripaludis
(strain S2 / LL) GN=prf1 PE=3 SV=1
Length = 419
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 56 LKNKNKMGKYFDE-ISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHS-- 112
+K KN + ++F E I D G +G ++ LE+G+++TLI E++ I R +K ++
Sbjct: 278 MKEKNLIQRFFKELIKDDGGLSAYGEAQVMKYLEMGAIDTLIVTEDIGITRVTVKCNNCD 337
Query: 113 -TSEDRV----LHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEII 167
T E V + EQ K K+ T G + + E + ++E+L++ L ++
Sbjct: 338 ITQEVNVKTNEMFKFEEQLKTKACPT---CGGAMYIDEEKDIIEYLSDLCNMHNTDLIVV 394
Query: 168 TDKSQEGSQFVRGFGGIG 185
+ ++EGSQ R F G+
Sbjct: 395 STDTEEGSQISRAFKGMA 412
>sp|Q5JGK6|RF1_PYRKO Peptide chain release factor subunit 1 OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=prf1 PE=3
SV=1
Length = 415
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 5 HNYVRKVAEVATTLFITN-DKPNIAGLILAGSADFKTELSQSDMF--------------- 48
H +++++ E A F+ +K + G+I+ G K E + D
Sbjct: 193 HEFMKRIGEHANKAFLPLLEKGELRGIIIGGPGPTKEEFVEGDYLHHELRKKVIGVVDIS 252
Query: 49 ---------------DPVR-FSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSV 92
D ++ +K + + ++F + +DTG +G ++ +ALELG+V
Sbjct: 253 YHGEYGLRELVEKASDILKDHEAVKERQLIQEFFKHLVKDTGMITYGEKEVRKALELGAV 312
Query: 93 ETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQ----EKDKSHFTDKETGVELELVECQP 148
+ L+ E D R K ++ + + ++ + +K +H + G + E
Sbjct: 313 DKLLISEGYDKVRVRAKCNNCGWEELKTMSEGEFHVYKKQLTHCP--KCGSQNITFEKWD 370
Query: 149 LLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ E L + GA +EII+ ++EG QF + FGG+G
Sbjct: 371 VAEELIKMAEESGADVEIISLDTEEGQQFYKAFGGLG 407
>sp|C5ZZZ5|RF1_THESM Peptide chain release factor subunit 1 OS=Thermococcus sibiricus
(strain MM 739 / DSM 12597) GN=prf1 PE=3 SV=1
Length = 415
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 5 HNYVRKVAEVATTLFITN-DKPNIAGLILAGSADFKTELSQSDMF--------------- 48
H +++++ E A+++F+ +K + G+I+ G K E + +
Sbjct: 193 HEFMKRIGEHASSVFLPLLEKDELKGIIIGGPGPTKEEFVEGEYLHHELRKRILGVVDIS 252
Query: 49 ---------------DPVR-FSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSV 92
D +R +K + + ++F + +DTG +G ++ +ALELG+V
Sbjct: 253 YHGEYGLRELVEKASDILREHEAVKERKLVQQFFKHLVKDTGLITYGEKEVRKALELGAV 312
Query: 93 ETLICWENLDIQRY-VLKNHSTSEDRVLHLTPEQEKDKSHFTD-KETGVELELVECQPLL 150
+ L+ E D R L N+ E+ E E K + + + VE +
Sbjct: 313 DILLLSEGYDRVRVKALCNNCGWEELKTMTEAEFELYKKNLKACPKCNSQNISVEKWDVA 372
Query: 151 EWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
E L + GA +EII+ ++EG QF + FGGI
Sbjct: 373 EELIKIAEEGGAEVEIISLDTEEGQQFYKAFGGIA 407
>sp|Q8PX75|RF1_METMA Peptide chain release factor subunit 1 OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=prf1 PE=1 SV=1
Length = 415
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 83/213 (38%), Gaps = 32/213 (15%)
Query: 5 HNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMF---------------- 48
H++ +++ + A+ +F+ D ++ G+++ G + K E +
Sbjct: 194 HDFYKRIGDAASEVFMAVDHKDLKGVLIGGPSPTKEEFHAGEFLHHELMKKILGLFDTAY 253
Query: 49 -DPVRFSPLKN--------------KNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVE 93
D S L N KN + +F E+ D+GK +G LE+ SV+
Sbjct: 254 TDESGLSELVNAAGEKLQDLELMGQKNAVRDFFKELIADSGKVAYGESQVRANLEINSVD 313
Query: 94 TLICWENLDIQRYVLKNHSTS-EDRVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEW 152
L+ E+L +R K E++ E + + G LE+ + +++
Sbjct: 314 VLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGEPAPAAGNCPKCGSSLEVTDVTDIVDE 373
Query: 153 LANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ A + ++ EGSQ + FGGI
Sbjct: 374 FSELADKSNAKVVFVSTDFDEGSQLMNAFGGIA 406
>sp|A4FX39|RF1_METM5 Peptide chain release factor subunit 1 OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=prf1 PE=3 SV=1
Length = 419
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 56 LKNKNKMGKYFDE-ISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTS 114
+K KN + K+F E I D G +G ++ LE+G+++TLI E++ I R +K ++
Sbjct: 278 MKEKNLIQKFFKELIKDDGGLSAYGEAQVMKYLEMGAIDTLIVTEDIGITRVTVKCNNCD 337
Query: 115 EDRVLHLTP-------EQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEII 167
+ +++ EQ K K+ T G + + E + ++E L++ + ++
Sbjct: 338 YAQEVNVKTNEMFKFEEQLKTKACPT---CGGAMYIDEEKDIIEHLSDLCHMHNTDIIVV 394
Query: 168 TDKSQEGSQFVRGFGGIG 185
+ ++EGSQ R F G+
Sbjct: 395 STDTEEGSQISRAFKGMA 412
>sp|A9AAH5|RF1_METM6 Peptide chain release factor subunit 1 OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=prf1 PE=3 SV=1
Length = 419
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 56 LKNKNKMGKYFDE-ISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTS 114
+K KN + ++F E I D G +G ++ LE+G+++TLI E++ I R +K ++
Sbjct: 278 MKEKNLIQRFFKELIKDDGGLSAYGEAQVMKYLEMGAIDTLIVTEDIGITRVTIKCNNCD 337
Query: 115 EDRVLHLTP-------EQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEII 167
+ +++ EQ K K+ T G + + E + ++E L++ + ++
Sbjct: 338 YTQEVNVKTNEMFKFEEQLKTKACPT---CGGAMYIDEEKDIIEHLSDLCNVHNTDIIVV 394
Query: 168 TDKSQEGSQFVRGFGGIG 185
+ ++EGSQ R F G+
Sbjct: 395 STDTEEGSQISRAFKGMA 412
>sp|P58227|RF1_THEVO Peptide chain release factor subunit 1 OS=Thermoplasma volcanium
(strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 /
GSS1) GN=prf1 PE=3 SV=1
Length = 418
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 57 KNKNKMGKYFDEISQ-DTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTSE 115
+ K+ M ++ E+ + D G +G + ALE V+ L+ E + +Y K + E
Sbjct: 279 REKDLMDRFLREVKKPDGGLAVYGEKAIRDALEQKMVDLLLISEGIRRVKYTYKCPTCGE 338
Query: 116 DRVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGS 175
++ P + DK+ G LEL+ ++E L K GA +EII+D+S EG
Sbjct: 339 EKTFSEEPSE----WPVCDKD-GTPLELIGEDDMIEDLYKLAKESGAQVEIISDQSDEGK 393
Query: 176 QFVRGFGGIG 185
+ FGG+
Sbjct: 394 LLKQAFGGLA 403
>sp|Q8TXB5|RF1_METKA Peptide chain release factor subunit 1 OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=prf1 PE=3 SV=1
Length = 409
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 34/212 (16%)
Query: 5 HNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMF---------------- 48
H + +KV E A F D ++ G+I+ G K E D
Sbjct: 193 HEFYQKVGEAAREAF--EDVKDLKGIIVGGPGPTKEEFLDGDYLPKDLKEKVLTVVDVGN 250
Query: 49 --------------DPVRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVET 94
+ ++ + L + ++ + F E + + +G E+ L++G+VE
Sbjct: 251 TDESGLREALNKAEEALKEAELVREKRLVRKFMEEAVNGELAAYG-EEVDELLKMGAVEV 309
Query: 95 LICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETG-VELELVECQPLLEWL 153
L+ E+L+ + +L+ + ++ + + E K E G EL + E + ++++
Sbjct: 310 LLVSEDLEGYKVILRCPECGYENIVTVKEKDEAKKYVEECPECGEAELNVEEIKDIVDYY 369
Query: 154 ANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ G+ +EII+ +++EG+QF F G+G
Sbjct: 370 VELAEQMGSNVEIISTETEEGAQFYNAFRGLG 401
>sp|Q58239|RF1_METJA Peptide chain release factor subunit 1 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=prf1 PE=3 SV=2
Length = 421
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 56 LKNKNKMGKYFDE-ISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLK----N 110
+K + + ++ E I +D G C+G ++ L AL +G+V+TLI E L+ +Y +K N
Sbjct: 278 MKEREAVQRFLKELIKEDGGLACYGEKEVLEALMMGAVDTLIVSEELE--KYKVKIACNN 335
Query: 111 HSTSEDRVLHLTPEQEKDKSHFTDK--ETGVELELVECQPLLEWLANNYKSFGATLEIIT 168
E++ ++ + ++ + + G L +VE + +E+L+ + GA L ++
Sbjct: 336 CDYLEEKTVNKLELIKLEEELKNAQCPKCGGALSIVEEKDYIEYLSELCEQSGAKLVTVS 395
Query: 169 DKSQEGSQFVRGFGGIG 185
+++EG+ + F GI
Sbjct: 396 SETEEGAMILNAFKGIA 412
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,530,393
Number of Sequences: 539616
Number of extensions: 2806503
Number of successful extensions: 6859
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6730
Number of HSP's gapped (non-prelim): 105
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)