RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy9094
(185 letters)
>1dt9_A ERF1, protein (eukaryotic peptide chain release factor subunit 1);
tRNA mimicry, protein sythesis, STOP codon recognition,
peptidyl-tRNA hydrolysis; 2.70A {Homo sapiens} SCOP:
c.55.4.2 d.79.3.2 d.91.1.1 PDB: 3e1y_A* 2ktu_A 2ktv_A
2lgt_A 2hst_A
Length = 437
Score = 160 bits (405), Expect = 7e-48
Identities = 139/216 (64%), Positives = 157/216 (72%), Gaps = 31/216 (14%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
MEKRHNYVRKVAE A LFI+ DK N+AGL+LAGSADFKTELSQSDMFD
Sbjct: 195 MEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLV 254
Query: 51 ---------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALEL 89
++ K +G+YFDEISQDTGKYCFGVEDTL+ALE+
Sbjct: 255 DISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEM 314
Query: 90 GSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPL 149
G+VE LI +ENLDI RYVL T E+++L+LTPEQEKDKSHFTDKETG E EL+E PL
Sbjct: 315 GAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPL 374
Query: 150 LEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
LEW ANNYK FGATLEI+TDKSQEGSQFV+GFGGIG
Sbjct: 375 LEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIG 410
>3e20_C Eukaryotic peptide chain release factor subunit 1; SUP35, SUP45,
translation termination, peptide release, GTP-
nucleotide-binding; 3.50A {Schizosaccharomyces pombe}
Length = 441
Score = 150 bits (379), Expect = 5e-44
Identities = 106/220 (48%), Positives = 136/220 (61%), Gaps = 37/220 (16%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDP---------- 50
EKRHNYVRKVAE A FIT+DKPN+AG++LAGSADFKTEL QSD+FD
Sbjct: 200 DEKRHNYVRKVAEGAVQHFITDDKPNVAGIVLAGSADFKTELGQSDLFDQRLQSRIIKTV 259
Query: 51 -----------------------VRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
V++ + K + ++FDEIS D+GKYCFGV DT+ AL
Sbjct: 260 DVSYGGDAGFNQAIELAADTLSNVKYV--QEKKLIQRFFDEISLDSGKYCFGVVDTMNAL 317
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKD--KSHFTDKETGVELELVE 145
+ G+VETL+C+ +LD+ RY KN + ++EKD S DK+TG E+ELV
Sbjct: 318 QEGAVETLLCFADLDMIRYEFKNSEGNPVITYMTKEQEEKDSTNSFLLDKDTGAEMELVS 377
Query: 146 CQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
L EWLA +YK +GA LE ++D+SQEG QFV+GFGGIG
Sbjct: 378 SMLLSEWLAEHYKDYGANLEFVSDRSQEGMQFVKGFGGIG 417
>3ir9_A Peptide chain release factor subunit 1; structural genomics,
APC36528.1, C-terminal domain, PSI-2, protein structure
initiative; 2.21A {Methanosarcina mazei}
Length = 166
Score = 139 bits (351), Expect = 1e-42
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 57 KNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTS-E 115
KN + +F E+ D+GK +G LE+ SV+ L+ E+L +R K E
Sbjct: 28 GQKNAVRDFFKELIADSGKVAYGESQVRANLEINSVDVLLLSEDLRAERVTTKCSVCGYE 87
Query: 116 DRVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGS 175
++ E + + G LE+ + +++ + A + ++ EGS
Sbjct: 88 NKWTRRWKPGEPAPAAGNCPKCGSSLEVTDVTDIVDEFSELADKSNAKVVFVSTDFDEGS 147
Query: 176 QFVRGFGGIG 185
Q + FGGI
Sbjct: 148 QLMNAFGGIA 157
>1x52_A Pelota homolog, CGI-17; ERF1_3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: d.79.3.2
Length = 124
Score = 79.0 bits (195), Expect = 1e-19
Identities = 15/129 (11%), Positives = 37/129 (28%), Gaps = 38/129 (29%)
Query: 57 KNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTSED 116
+ ++ + + + +G++ +A E +++TL+ + L
Sbjct: 20 GEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAMAIDTLLISDEL--------------- 64
Query: 117 RVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQ 176
F ++ V L ++ K T+ I + G Q
Sbjct: 65 ---------------FRHQDVATRSRYVR-------LVDSVKENAGTVRIFSSLHVSGEQ 102
Query: 177 FVRGFGGIG 185
G+
Sbjct: 103 L-SQLTGVA 110
>3agk_A Peptide chain release factor subunit 1; translation; 2.10A
{Aeropyrum pernix}
Length = 373
Score = 83.5 bits (205), Expect = 2e-19
Identities = 39/218 (17%), Positives = 71/218 (32%), Gaps = 79/218 (36%)
Query: 1 MEKRHNYVRKVAEVATTLFITN-DKPNIAGLILAGSADFKTELSQSDMFDPVRFSPLKNK 59
+ + +KV E A+ L + +K + G+I+AG K E + + D L +
Sbjct: 192 EQMVDEFFKKVGEEASNLLVPLAEKGVLKGVIVAGPGLAKQEFVEGNYLDYRLKKILAPE 251
Query: 60 --------------------------------NKMGKYFDEISQDTGKYCFGVEDTLRAL 87
N M ++ +++ TG +G +D AL
Sbjct: 252 LVDVAYQGLQGLKEAVMKAEKVVEAQMYRDAVNAMEEFKLHLAKGTGMIVYGEKDVEAAL 311
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
E+G+V+TL+ E+ +
Sbjct: 312 EMGAVKTLLIHESRED-------------------------------------------- 327
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
LE KS GA + ++ + E F++ FGG+
Sbjct: 328 --LEEWVEKAKSSGAQVIVVPESLAEAEWFLKTFGGLA 363
>3mca_B Protein DOM34, elongation factor 1 alpha-like protein; protein
protein complex, translation regulation; 2.74A
{Schizosaccharomyces pombe}
Length = 390
Score = 81.7 bits (201), Expect = 8e-19
Identities = 33/226 (14%), Positives = 60/226 (26%), Gaps = 82/226 (36%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVR---FSPLK 57
+ + V + + F D + +ILA L V+ +K
Sbjct: 179 QKGLDKFYDSVFQSINSEF---DFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVK 235
Query: 58 NKNK--------------------------------------MGKYFDEISQDTGKYCFG 79
+KNK + K++D +++D K +G
Sbjct: 236 SKNKFVILHSSTGHIHSLNEILKDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYG 295
Query: 80 VEDTLRALELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGV 139
L+A ELG++ L+ ++L F +
Sbjct: 296 PNHVLKAFELGAIGELLISDSL------------------------------FRSSDIAT 325
Query: 140 ELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ V L K + I + + G Q GI
Sbjct: 326 RKKWVS-------LVEGVKEINCPVYIFSSLHESGKQL-DLLSGIA 363
>3j15_A Protein pelota; ribosome recycling, ribosome, archaea,
translation-transport complex; HET: ADP; 6.60A
{Pyrococcus furiosus}
Length = 357
Score = 78.7 bits (193), Expect = 8e-18
Identities = 25/218 (11%), Positives = 60/218 (27%), Gaps = 77/218 (35%)
Query: 1 MEKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSP----- 55
+ + VA+ + + N+ I+AG K + + +
Sbjct: 176 ESEEMKFFHDVAKTMEEVM---KRENVEKAIVAGPGFVKEDFYKFLKEKYPELAKKVVIE 232
Query: 56 ----------------------------LKNKNKMGKYFDEISQDTGKYCFGVEDTLRAL 87
K + K + I+++ G +G+++ A+
Sbjct: 233 DTSVTGRTGIYEVIKRGVVDRVYQENRVAKEVQLVEKVLENIARNNGLVAYGLKEVEEAV 292
Query: 88 ELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQ 147
G+VETL+ + L L E + D
Sbjct: 293 NYGAVETLLVLDEL-------------------LKGELREKVEELMDA------------ 321
Query: 148 PLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ + +++ + + G + ++ GG+
Sbjct: 322 ---------VRYSRGEVVVVSSEHEGG-EKLKALGGLA 349
>2vgn_A DOM34; translation termination factor, protein biosynthesis,
translation regulation, cell division, mRNA degradation;
2.5A {Saccharomyces cerevisiae} SCOP: b.38.4.1 c.55.4.2
d.79.3.2 PDB: 2vgm_A 3izq_0 3j16_A*
Length = 386
Score = 77.1 bits (189), Expect = 4e-17
Identities = 21/225 (9%), Positives = 54/225 (24%), Gaps = 82/225 (36%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQ------SDMFDPVRFSP 55
EK + + + + + +IL + L + +
Sbjct: 186 EKTEKFYKAIYSAMKKDL---NFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKKILDN 242
Query: 56 L-----------------------------------KNKNKMGKYFDEISQDTGKYCFGV 80
K M ++ +++D K +G
Sbjct: 243 KGMFFIAHCSTGYLQGINEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDKAWYGE 302
Query: 81 EDTLRALELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVE 140
++ ++A E G++ L+ + +
Sbjct: 303 KEVVKAAEYGAISYLLLTDKV------------------------------LHSDNIAQR 332
Query: 141 LELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
E ++ L ++ +S G +++ G + GI
Sbjct: 333 EEYLK-------LMDSVESNGGKALVLSTLHSLGEEL-DQLTGIA 369
>3obw_A Protein pelota homolog; SM fold, hydrolase; 2.60A {Sulfolobus
solfataricus}
Length = 364
Score = 70.2 bits (171), Expect = 8e-15
Identities = 29/210 (13%), Positives = 64/210 (30%), Gaps = 74/210 (35%)
Query: 9 RKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQ------------------------ 44
+ E+AT L + + ++LAG FK E+S+
Sbjct: 188 QNALEIATELAEYVKQYDPDAILLAGPGFFKEEVSKKVNAILKNKKIYIDSVSSATRAGL 247
Query: 45 ---------SDMFDPVRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVETL 95
+ + KM K + +++ +G+E A+E+G+VET+
Sbjct: 248 HEVLKRDIIDKIMTDYEIA--IGAKKMEKAMELLAKQPELVTYGLEQVKNAIEMGAVETV 305
Query: 96 ICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLAN 155
+ E+L L ++ +E +
Sbjct: 306 LVIEDL-----------------LSSDEQERLT---------------------IERMLE 327
Query: 156 NYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ ++ + ++ +S + + GI
Sbjct: 328 DIENKRGEVILVPKESPIYFEL-KNLTGIL 356
>3agj_B Protein pelota homolog; GTP binding, translation-hydrolase complex;
HET: GTP; 2.30A {Aeropyrum pernix}
Length = 358
Score = 70.2 bits (171), Expect = 9e-15
Identities = 23/217 (10%), Positives = 59/217 (27%), Gaps = 76/217 (35%)
Query: 2 EKRHNYVRKVAEVATTLFITNDKPNIAGLILAGSADFKTELSQ----------------- 44
++ YV + A+ + ++AG KT +++
Sbjct: 171 QEVEKYVDRAAKRIVEEA---ARHRSPIAVIAGPGQLKTSVAEKVQRAMPSLKVATVDTS 227
Query: 45 ----------------SDMFDPVRFSPLKNKNKMGKYFDEISQDTGKYCFGVEDTLRALE 88
+ + + + + + ++ I++ + + L
Sbjct: 228 MGGVAGVREALRRESVTRILRELSIV--EAEGVLEEFLRRIAKSRDTVAYTPGEVLAVAR 285
Query: 89 LGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELVECQP 148
+G+V+T++ + L L + +
Sbjct: 286 MGAVDTVLLVDTL------LHSPD-------------------------------DAVRE 308
Query: 149 LLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
++ +S G + II S G + FGG+
Sbjct: 309 AVDEALRLVESMGGRVIIIPGDSPAGERL-VSFGGVI 344
>3oby_A Protein pelota homolog; SM fold, hydrolase; 2.90A {Archaeoglobus
fulgidus}
Length = 352
Score = 67.0 bits (163), Expect = 1e-13
Identities = 21/221 (9%), Positives = 57/221 (25%), Gaps = 78/221 (35%)
Query: 2 EKRHNYVRKVAEVATTLF----ITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSP-- 55
E+R Y + + + F + + LI+AG K + +
Sbjct: 156 EERMGYGKGMGDSRKEFFGEVAAKLESFDFKYLIVAGPGFAKNDFLDFLKERYPEMAKNA 215
Query: 56 -------------------------------LKNKNKMGKYFDEISQDTGKYCFGVEDTL 84
+ + + + I++ + +G+++
Sbjct: 216 VVVDVSSVGSRGFIEILKRRVVDKIVGEVRLAEEAEYIDRLLEGIAKG-ERVAYGLDEVR 274
Query: 85 RALELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPEQEKDKSHFTDKETGVELELV 144
A ++E L+ + ++
Sbjct: 275 EAHNYRAIEVLLVADEFLLEE--------------------------------------- 295
Query: 145 ECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIG 185
+ ++ L + G + I++ + + G + GGI
Sbjct: 296 REKWDVDGLLREVEESGGKVVIMSTEFEPGKRL-MSLGGIA 335
>2qi2_A Pelota, cell division protein pelota related protein; DOM34, cell
cycle; 2.90A {Thermoplasma acidophilum} SCOP: b.38.4.1
c.55.4.2 d.79.3.2
Length = 347
Score = 46.7 bits (110), Expect = 1e-06
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 46/129 (35%)
Query: 57 KNKNKMGKYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTSED 116
++K + ++ + +D G Y G + T AL++G++ LI + + +ED
Sbjct: 249 RDKEIVDEFLVAVKKDMGVY--GRDQTESALQMGALSDLIITDEM----------FRTED 296
Query: 117 RVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQ 176
+ ++ G + I++ + G
Sbjct: 297 G---------------------------------RRSLSIAQTVGTRIHIVSVSNDPGQI 323
Query: 177 FVRGFGGIG 185
V+ FGG
Sbjct: 324 -VKKFGGFA 331
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.7 bits (100), Expect = 3e-05
Identities = 40/236 (16%), Positives = 70/236 (29%), Gaps = 72/236 (30%)
Query: 1 ME--KRHNYVRKVAEVATTLFITNDKPNIAGLILAG----SADFKTELSQS--DMFDPVR 52
M+ K + V A F +I +++ + F E + + + +
Sbjct: 1633 MDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMI 1692
Query: 53 F-SPLKNKNKMGKYFDEISQDTGKYCF-GVEDTLR-------ALELGSVETLICWENLDI 103
F + + K K K F EI++ + Y F + L AL L +E
Sbjct: 1693 FETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEK---AAFE---- 1745
Query: 104 QRYVLKN------------HS--------------TSED--RVLHL--------TPEQEK 127
LK+ HS + E V+ P E
Sbjct: 1746 ---DLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDEL 1802
Query: 128 DKSHF-----TDKETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFV 178
+S++ Q ++E + K G +EI+ E Q+V
Sbjct: 1803 GRSNYGMIAINPGRVAASFSQEALQYVVERVG---KRTGWLVEIVNYNV-ENQQYV 1854
Score = 33.1 bits (75), Expect = 0.050
Identities = 20/91 (21%), Positives = 28/91 (30%), Gaps = 38/91 (41%)
Query: 65 YFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTSEDRVLHLTPE 124
YF+E+ +D Y T L V LI S + + L
Sbjct: 169 YFEEL-RDL--Y-----QTYHVL----VGDLI---------------KFSAETLSELIRT 201
Query: 125 QEKDKSHFTDKETGVELELVECQPLLEWLAN 155
+ FT G+ +LEWL N
Sbjct: 202 TLDAEKVFTQ---GL--------NILEWLEN 221
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 34.8 bits (79), Expect = 0.015
Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 72 DTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSTSE-DRVLHLTPEQEKDKS 130
+TG++ + +D L E V+ C + D+ + +L S E D ++
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSIL---SKEEIDHIIMSKDAVSGTLR 66
Query: 131 HFT---DKETGVELELVE--CQPLLEWLANNYKS 159
F K+ + + VE + ++L + K+
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100
Score = 32.9 bits (74), Expect = 0.056
Identities = 30/178 (16%), Positives = 53/178 (29%), Gaps = 49/178 (27%)
Query: 17 TLFITNDKPNIAGLILAGSADFKTELSQSDMFDPVRFSPLKNKNKMGKYFDEISQDTGKY 76
L T K L SA T +S +P + K+ + KY D QD
Sbjct: 268 ILLTTRFKQVTDFL----SAATTTHISLDHHSMT--LTPDEVKSLLLKYLDCRPQD---- 317
Query: 77 CFGVEDTLRA-------LELGSV-----ETLICWENLDIQRYVLKN--HSTSEDRVLHLT 122
L L + + L W+N ++V + + E + L
Sbjct: 318 -------LPREVLTTNPRRLSIIAESIRDGLATWDNW---KHVNCDKLTTIIESSLNVLE 367
Query: 123 PEQEKDKSHFTD-----KETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGS 175
P + + F + L+ L+ W + ++ +K + S
Sbjct: 368 PAEYRK--MFDRLSVFPPSAHIPTILLS---LI-WFDVIKS----DVMVVVNKLHKYS 415
>1w41_A 50S ribosomal protein L30E; electrostatic interactions,
thermostability, protein engineering; 1.7A {Thermococcus
celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A
1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Length = 101
Score = 26.3 bits (58), Expect = 3.2
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 71 QDTGKYCFGVEDTLRALELGSVETLICWENLDIQR 105
QDTGK G +++ ++G + +I N
Sbjct: 12 QDTGKIVMGARKSIQYAKMGGAKLIIVARNARPDI 46
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A;
molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A
{Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A*
1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Length = 201
Score = 26.5 bits (59), Expect = 5.1
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 22 NDKPNIAGLILAG 34
N I G++LAG
Sbjct: 2 NLMTTITGVVLAG 14
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.316 0.134 0.389
Gapped
Lambda K H
0.267 0.0523 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,725,798
Number of extensions: 150803
Number of successful extensions: 291
Number of sequences better than 10.0: 1
Number of HSP's gapped: 277
Number of HSP's successfully gapped: 24
Length of query: 185
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 97
Effective length of database: 4,244,745
Effective search space: 411740265
Effective search space used: 411740265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.1 bits)