Your job contains 1 sequence.
>psy9101
ISTSSVLSQKSKILSHDPPLAATNTVLSKDESRDFMAIFPDLVRDLTDAGRHSDIPDVTK
WYAKVLQYNKAISNNVYLGTYFIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENL
HLAQILGWCVEIVSLKTSMGQSLDLSTANDLSKFTMDRYEAIVKYKTAFYSFQLPVALAM
HMAGMQDVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVA
LQRATPAQRKLMEVN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9101
(255 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0025373 - symbol:Fpps "Farnesyl pyrophosphate synt... 408 1.8e-71 3
UNIPROTKB|D0G6X4 - symbol:FDPS "Uncharacterized protein" ... 393 4.1e-52 3
UNIPROTKB|F1N431 - symbol:RUSC1 "Uncharacterized protein"... 398 1.4e-48 2
UNIPROTKB|Q8WMY2 - symbol:FDPS "Farnesyl pyrophosphate sy... 398 1.4e-48 2
UNIPROTKB|E9PCI9 - symbol:FDPS "Farnesyl pyrophosphate sy... 394 9.8e-48 2
UNIPROTKB|P14324 - symbol:FDPS "Farnesyl pyrophosphate sy... 394 9.8e-48 2
UNIPROTKB|F1P926 - symbol:FDPS "Uncharacterized protein" ... 399 6.8e-47 2
SGD|S000003703 - symbol:ERG20 "Farnesyl pyrophosphate syn... 353 6.8e-47 3
MGI|MGI:104888 - symbol:Fdps "farnesyl diphosphate synthe... 387 1.1e-46 2
POMBASE|SPAC6F12.13c - symbol:fps1 "geranyltranstransfera... 357 3.0e-43 3
TAIR|locus:2130654 - symbol:FPS2 "farnesyl diphosphate sy... 337 5.9e-42 2
TAIR|locus:2160947 - symbol:FPS1 "farnesyl diphosphate sy... 331 2.5e-41 2
ASPGD|ASPL0000012297 - symbol:AN8012 species:162425 "Emer... 332 3.7e-41 3
CGD|CAL0002030 - symbol:ERG20 species:5476 "Candida albic... 360 1.7e-40 2
UNIPROTKB|Q59TD9 - symbol:ERG20 "Likely farnesyl diphosph... 360 1.7e-40 2
DICTYBASE|DDB_G0278735 - symbol:fps "farnesyl diphosphate... 337 4.6e-40 2
ZFIN|ZDB-GENE-050506-78 - symbol:fdps "farnesyl diphospha... 423 1.1e-39 1
UNIPROTKB|G3MZT9 - symbol:G3MZT9 "Uncharacterized protein... 309 3.2e-39 2
UNIPROTKB|P08836 - symbol:FDPS "Farnesyl pyrophosphate sy... 414 9.9e-39 1
UNIPROTKB|G4MLE9 - symbol:MGG_08649 "Farnesyl pyrophospha... 324 2.4e-38 3
RGD|68953 - symbol:Fdps "farnesyl diphosphate synthase" s... 395 1.0e-36 1
UNIPROTKB|F1LND7 - symbol:Fdps "Farnesyl pyrophosphate sy... 388 5.7e-36 1
DICTYBASE|DDB_G0278823 - symbol:DDB_G0278823 "putative fa... 290 2.1e-34 2
UNIPROTKB|F1N0Q7 - symbol:RUSC1 "Uncharacterized protein"... 231 1.2e-28 2
UNIPROTKB|F1M2I4 - symbol:F1M2I4 "Uncharacterized protein... 255 4.5e-27 2
POMBASE|SPBC36.06c - symbol:spo9 "farnesyl pyrophosphate ... 244 1.2e-26 2
WB|WBGene00011058 - symbol:fdps-1 species:6239 "Caenorhab... 272 1.1e-23 1
GENEDB_PFALCIPARUM|PF11_0295 - symbol:PF11_0295 "farnesyl... 195 1.3e-20 2
UNIPROTKB|Q8II79 - symbol:PF11_0295 "Farnesyl pyrophospha... 195 1.3e-20 2
DICTYBASE|DDB_G0268742 - symbol:DDB_G0268742 species:4468... 140 4.1e-12 3
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 117 7.6e-06 2
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 110 0.00091 1
>FB|FBgn0025373 [details] [associations]
symbol:Fpps "Farnesyl pyrophosphate synthase" species:7227
"Drosophila melanogaster" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS;NAS] [GO:0004161
"dimethylallyltranstransferase activity" evidence=NAS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=IC]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035220 "wing
disc development" evidence=IGI] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:AE013599 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0035220 GO:GO:0008299
GO:GO:0008354 GO:GO:0004161 GO:GO:0004337 KO:K00787 OMA:VAMQRAN
GeneTree:ENSGT00530000064127 HSSP:P08836 FlyBase:FBgn0025373
EMBL:AF132554 EMBL:AY071445 RefSeq:NP_477380.1 UniGene:Dm.3229
SMR:Q7KN61 IntAct:Q7KN61 STRING:Q7KN61 EnsemblMetazoa:FBtr0088170
GeneID:36209 KEGG:dme:Dmel_CG12389 UCSC:CG12389-RA CTD:36209
InParanoid:Q7KN61 GenomeRNAi:36209 NextBio:797354 Uniprot:Q7KN61
Length = 419
Score = 408 (148.7 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 76/117 (64%), Positives = 98/117 (83%)
Query: 137 TSMGQSLDLSTAND-LSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQAR 195
T+ GQSLD +N +S+FTM+ Y+AIV+ KTA+YSF LP ALA+H+AG +D E RQ++
Sbjct: 236 TTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSK 295
Query: 196 TLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRKLM 252
T+LLEMG+FFQVQDD+LDCFG P+VTGKIGTDI+D KCSWLAVVA+QRA Q+++M
Sbjct: 296 TILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIM 352
Score = 175 (66.7 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 82 FIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+ QVLQYNVP GKKNRG+ V+ YK L +LTPEN+ LAQ LGWCVE++
Sbjct: 113 WFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEML 164
Score = 171 (65.3 bits), Expect = 1.8e-71, Sum P(3) = 1.8e-71
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 11 SKILSHDPPLAATNTVLSKDESRDFMAIFPDLVRDLTDAGRHSDIPDVTKWYAKVLQYN 69
S + +H P+AA TV SKDESRDFMA+FPDLVRD+T + + D KW+A+VLQYN
Sbjct: 64 STLQNHSVPIAARVTV-SKDESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYN 121
>UNIPROTKB|D0G6X4 [details] [associations]
symbol:FDPS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 KO:K00787 OMA:VAMQRAN CTD:2224 OrthoDB:EOG4ZGPCS
GeneTree:ENSGT00530000064127 EMBL:CU469433 EMBL:AB529527
RefSeq:NP_001172060.1 UniGene:Ssc.57723 ProteinModelPortal:D0G6X4
STRING:D0G6X4 Ensembl:ENSSSCT00000007132 GeneID:100153932
KEGG:ssc:100153932 Uniprot:D0G6X4
Length = 421
Score = 393 (143.4 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 77/126 (61%), Positives = 95/126 (75%)
Query: 134 SLKTSMGQSLDLSTA---N-DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVE 189
S T +GQ+LDL N DLS+FT RY++IVKYKTAFYSF LPVA AM+MAG+ +
Sbjct: 232 SYNTEIGQTLDLIAGPQGNVDLSRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEK 291
Query: 190 VHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQR 249
H A+ +L+EMG FFQ+QDDYLD FG P VTGKIGTDI+D KCSWL V LQRA+P QR
Sbjct: 292 EHANAKKILMEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRASPEQR 351
Query: 250 KLMEVN 255
++++ N
Sbjct: 352 QILQEN 357
Score = 117 (46.2 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YNV GK NRG+ ++V ++ L +P + ++L A +GWC+E++
Sbjct: 115 EVLEYNVVGGKYNRGITVLVVFRELVEPRKQDADSLQRALTVGWCIELL 163
Score = 59 (25.8 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 31 ESRDFMAIFPDLVRDLT--DAGRHSDIPDVTKWYAKVLQYN 69
E +DF+ F +V+ LT D G H +I D +VL+YN
Sbjct: 81 ERQDFIQHFSQIVKVLTEEDIG-HPEIGDAVARLKEVLEYN 120
>UNIPROTKB|F1N431 [details] [associations]
symbol:RUSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 IPI:IPI00839514 GeneTree:ENSGT00530000063878
EMBL:DAAA02007155 Ensembl:ENSBTAT00000014472 OMA:HEYERES
ArrayExpress:F1N431 Uniprot:F1N431
Length = 421
Score = 398 (145.2 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 78/126 (61%), Positives = 97/126 (76%)
Query: 134 SLKTSMGQSLDLSTA---N-DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVE 189
S +T +GQ+LDL TA N DL +FT RY++IVKYKTAFYSF LPVA AM+MAG+ +
Sbjct: 232 SYQTEIGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEK 291
Query: 190 VHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQR 249
H A+ +LLEMG FFQ+QDDYLD FG P +TGKIGTDI+D KCSWL V LQRA+P QR
Sbjct: 292 EHAHAKKILLEMGEFFQIQDDYLDLFGDPSMTGKIGTDIQDNKCSWLVVQCLQRASPEQR 351
Query: 250 KLMEVN 255
++++ N
Sbjct: 352 QILQEN 357
Score = 126 (49.4 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YN GK NRGL +V+ ++ L +P + P++L A +GWCVE++
Sbjct: 115 EVLEYNAIGGKYNRGLTVVITFRELVEPGKQDPDSLQRALTVGWCVELL 163
Score = 63 (27.2 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 31 ESRDFMAIFPDLVRDLT--DAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIVQVLQ 88
E +DF+ F +V+ LT D G H +I D +VL+YN AI G ++ +
Sbjct: 81 ERQDFIQHFSQIVKVLTEEDIG-HPEIGDAITRLKEVLEYN-AIGGKYNRGLTVVITFRE 138
Query: 89 YNVPSGKKN 97
P GK++
Sbjct: 139 LVEP-GKQD 146
>UNIPROTKB|Q8WMY2 [details] [associations]
symbol:FDPS "Farnesyl pyrophosphate synthase" species:9913
"Bos taurus" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 GO:GO:0005737 GO:GO:0019048 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695
eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 KO:K00787 EMBL:AF461050 EMBL:BC149572 IPI:IPI00839514
RefSeq:NP_803463.1 UniGene:Bt.23182 ProteinModelPortal:Q8WMY2
SMR:Q8WMY2 STRING:Q8WMY2 PRIDE:Q8WMY2 GeneID:281156 KEGG:bta:281156
CTD:2224 HOVERGEN:HBG005741 NextBio:20805219 ArrayExpress:Q8WMY2
Uniprot:Q8WMY2
Length = 353
Score = 398 (145.2 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 78/126 (61%), Positives = 97/126 (76%)
Query: 134 SLKTSMGQSLDLSTA---N-DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVE 189
S +T +GQ+LDL TA N DL +FT RY++IVKYKTAFYSF LPVA AM+MAG+ +
Sbjct: 164 SYQTEIGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEK 223
Query: 190 VHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQR 249
H A+ +LLEMG FFQ+QDDYLD FG P +TGKIGTDI+D KCSWL V LQRA+P QR
Sbjct: 224 EHAHAKKILLEMGEFFQIQDDYLDLFGDPSMTGKIGTDIQDNKCSWLVVQCLQRASPEQR 283
Query: 250 KLMEVN 255
++++ N
Sbjct: 284 QILQEN 289
Score = 126 (49.4 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YN GK NRGL +V+ ++ L +P + P++L A +GWCVE++
Sbjct: 47 EVLEYNAIGGKYNRGLTVVITFRELVEPGKQDPDSLQRALTVGWCVELL 95
Score = 63 (27.2 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 31 ESRDFMAIFPDLVRDLT--DAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIVQVLQ 88
E +DF+ F +V+ LT D G H +I D +VL+YN AI G ++ +
Sbjct: 13 ERQDFIQHFSQIVKVLTEEDIG-HPEIGDAITRLKEVLEYN-AIGGKYNRGLTVVITFRE 70
Query: 89 YNVPSGKKN 97
P GK++
Sbjct: 71 LVEP-GKQD 78
>UNIPROTKB|E9PCI9 [details] [associations]
symbol:FDPS "Farnesyl pyrophosphate synthase" species:9606
"Homo sapiens" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL139410 GO:GO:0008299 KO:K00787 CTD:2224
RefSeq:NP_001129294.1 RefSeq:NP_001229753.1 UniGene:Hs.335918
DNASU:2224 GeneID:2224 KEGG:hsa:2224 HGNC:HGNC:3631 ChiTaRS:FDPS
GenomeRNAi:2224 NextBio:9017 IPI:IPI00914971
ProteinModelPortal:E9PCI9 SMR:E9PCI9 PRIDE:E9PCI9
Ensembl:ENST00000447866 ArrayExpress:E9PCI9 Bgee:E9PCI9
Uniprot:E9PCI9
Length = 353
Score = 394 (143.8 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 78/126 (61%), Positives = 96/126 (76%)
Query: 134 SLKTSMGQSLDLSTA---N-DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVE 189
S +T +GQ+LDL TA N DL +FT RY++IVKYKTAFYSF LP+A AM+MAG+ +
Sbjct: 164 SYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEK 223
Query: 190 VHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQR 249
H A+ +LLEMG FFQ+QDDYLD FG P VTGKIGTDI+D KCSWL V LQRATP Q
Sbjct: 224 EHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQY 283
Query: 250 KLMEVN 255
++++ N
Sbjct: 284 QILKEN 289
Score = 122 (48.0 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YN GK NRGL +VVA++ L +P + ++L A +GWCVE++
Sbjct: 47 EVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 95
Score = 67 (28.6 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 24 NTVLSKDESRDFMAIFPDLVRDLT-DAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYF 82
N+ + E +DF+ F +VR LT D H +I D +VL+YN AI G
Sbjct: 6 NSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYN-AIGGKYNRGLTV 64
Query: 83 IV 84
+V
Sbjct: 65 VV 66
>UNIPROTKB|P14324 [details] [associations]
symbol:FDPS "Farnesyl pyrophosphate synthase" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_111217 InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0019048 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006695 EMBL:CH471121 EMBL:AL139410
eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 HOGENOM:HOG000160912 KO:K00787 OMA:VAMQRAN CTD:2224
HOVERGEN:HBG005741 EMBL:D14697 EMBL:AK291084 EMBL:BC010004
EMBL:J05262 EMBL:M29863 IPI:IPI00914566 PIR:A35726
RefSeq:NP_001129293.1 RefSeq:NP_001129294.1 RefSeq:NP_001229753.1
RefSeq:NP_001229754.1 RefSeq:NP_001995.1 UniGene:Hs.335918 PDB:1YQ7
PDB:1YV5 PDB:1ZW5 PDB:2F7M PDB:2F89 PDB:2F8C PDB:2F8Z PDB:2F92
PDB:2F94 PDB:2F9K PDB:2OPM PDB:2OPN PDB:2QIS PDB:2RAH PDB:2VF6
PDB:3B7L PDB:3CP6 PDB:3N1V PDB:3N1W PDB:3N3L PDB:3N45 PDB:3N46
PDB:3N49 PDB:3N5H PDB:3N5J PDB:3N6K PDB:3RYE PDB:3S4J PDB:4DEM
PDB:4H5C PDB:4H5D PDB:4H5E PDBsum:1YQ7 PDBsum:1YV5 PDBsum:1ZW5
PDBsum:2F7M PDBsum:2F89 PDBsum:2F8C PDBsum:2F8Z PDBsum:2F92
PDBsum:2F94 PDBsum:2F9K PDBsum:2OPM PDBsum:2OPN PDBsum:2QIS
PDBsum:2RAH PDBsum:2VF6 PDBsum:3B7L PDBsum:3CP6 PDBsum:3N1V
PDBsum:3N1W PDBsum:3N3L PDBsum:3N45 PDBsum:3N46 PDBsum:3N49
PDBsum:3N5H PDBsum:3N5J PDBsum:3N6K PDBsum:3RYE PDBsum:3S4J
PDBsum:4DEM PDBsum:4H5C PDBsum:4H5D PDBsum:4H5E
ProteinModelPortal:P14324 SMR:P14324 IntAct:P14324
MINT:MINT-2858951 STRING:P14324 PhosphoSite:P14324 DMDM:215274250
PaxDb:P14324 PRIDE:P14324 DNASU:2224 Ensembl:ENST00000356657
Ensembl:ENST00000368356 GeneID:2224 KEGG:hsa:2224 UCSC:uc001fkc.2
GeneCards:GC01P155278 H-InvDB:HIX0025342 HGNC:HGNC:3631
HPA:HPA028200 MIM:134629 neXtProt:NX_P14324 PharmGKB:PA28075
InParanoid:P14324 OrthoDB:EOG4ZGPCS PhylomeDB:P14324
BioCyc:MetaCyc:ENSG00000160752-MONOMER SABIO-RK:P14324
BindingDB:P14324 ChEMBL:CHEMBL1782 ChiTaRS:FDPS DrugBank:DB00630
DrugBank:DB00710 DrugBank:DB00282 DrugBank:DB00884 DrugBank:DB00399
EvolutionaryTrace:P14324 GenomeRNAi:2224 NextBio:9017
ArrayExpress:P14324 Bgee:P14324 CleanEx:HS_FDPS
Genevestigator:P14324 GermOnline:ENSG00000160752 Uniprot:P14324
Length = 419
Score = 394 (143.8 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 78/126 (61%), Positives = 96/126 (76%)
Query: 134 SLKTSMGQSLDLSTA---N-DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVE 189
S +T +GQ+LDL TA N DL +FT RY++IVKYKTAFYSF LP+A AM+MAG+ +
Sbjct: 230 SYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEK 289
Query: 190 VHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQR 249
H A+ +LLEMG FFQ+QDDYLD FG P VTGKIGTDI+D KCSWL V LQRATP Q
Sbjct: 290 EHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQY 349
Query: 250 KLMEVN 255
++++ N
Sbjct: 350 QILKEN 355
Score = 122 (48.0 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YN GK NRGL +VVA++ L +P + ++L A +GWCVE++
Sbjct: 113 EVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 161
Score = 67 (28.6 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 24 NTVLSKDESRDFMAIFPDLVRDLT-DAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYF 82
N+ + E +DF+ F +VR LT D H +I D +VL+YN AI G
Sbjct: 72 NSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYN-AIGGKYNRGLTV 130
Query: 83 IV 84
+V
Sbjct: 131 VV 132
>UNIPROTKB|F1P926 [details] [associations]
symbol:FDPS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 OMA:VAMQRAN GeneTree:ENSGT00530000064127
EMBL:AAEX03005338 Ensembl:ENSCAFT00000026846 Uniprot:F1P926
Length = 421
Score = 399 (145.5 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 78/126 (61%), Positives = 97/126 (76%)
Query: 134 SLKTSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVE 189
S +T +GQ+LDL TA DLS+FT RY++IVKYKTAFYSF LPVA AM+MAG+ +
Sbjct: 232 SYQTEIGQTLDLITAPQGSVDLSRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEK 291
Query: 190 VHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQR 249
H A+ +LLEMG FFQ+QDD+LD FG P VTGKIGTDI+D KCSWL V LQ+A+P QR
Sbjct: 292 EHANAKKILLEMGEFFQIQDDFLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQQASPEQR 351
Query: 250 KLMEVN 255
K+++ N
Sbjct: 352 KVLQEN 357
Score = 109 (43.4 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YN GK RGL +++A++ L +P + +L A +GWCVE++
Sbjct: 115 EVLEYNAVGGKYQRGLTVLIAFQELVEPRKQDAASLRRALTVGWCVELL 163
Score = 63 (27.2 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 33 RDFMAIFPDLVRDLTDAGR-HSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIV 84
+DF+ FP +V+ LT+ G H + D +VL+YN A+ G ++
Sbjct: 83 QDFIQHFPQIVKILTEDGMGHPETGDAIARLKEVLEYN-AVGGKYQRGLTVLI 134
>SGD|S000003703 [details] [associations]
symbol:ERG20 "Farnesyl pyrophosphate synthetase" species:4932
"Saccharomyces cerevisiae" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;IDA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA;IDA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA;IDA]
[GO:0006696 "ergosterol biosynthetic process" evidence=TAS]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
SGD:S000003703 GO:GO:0005783 EMBL:BK006943 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
HOGENOM:HOG000160912 KO:K00787 OMA:VAMQRAN
GeneTree:ENSGT00530000064127 OrthoDB:EOG4SFDFW EMBL:J05091
EMBL:Z49442 EMBL:X05550 PIR:A34441 RefSeq:NP_012368.1
ProteinModelPortal:P08524 SMR:P08524 DIP:DIP-1163N IntAct:P08524
MINT:MINT-555012 STRING:P08524 PaxDb:P08524 PeptideAtlas:P08524
PRIDE:P08524 EnsemblFungi:YJL167W GeneID:853272 KEGG:sce:YJL167W
CYGD:YJL167w BioCyc:MetaCyc:MONOMER-655 NextBio:973547
Genevestigator:P08524 GermOnline:YJL167W Uniprot:P08524
Length = 352
Score = 353 (129.3 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 68/127 (53%), Positives = 95/127 (74%)
Query: 133 VSLKTSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDV 188
V+ +T +GQ +DL TA DLSKF++ ++ IV +KTA+YSF LPVALAM++AG+ D
Sbjct: 160 VTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSFYLPVALAMYVAGITDE 219
Query: 189 EVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ 248
+ +QAR +L+ +G +FQ+QDDYLDCFGTP+ GKIGTDI+D KCSW+ AL+ A+ Q
Sbjct: 220 KDLKQARDVLIPLGEYFQIQDDYLDCFGTPEQIGKIGTDIQDNKCSWVINKALELASAEQ 279
Query: 249 RKLMEVN 255
RK ++ N
Sbjct: 280 RKTLDEN 286
Score = 107 (42.7 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 87 LQYNVPSGKKNRGLALVVAYKMLAQPS--ELTPENLHLAQILGWCVEIV 133
L YN P GK NRGL++V Y +L+ + +L E ILGWC+E++
Sbjct: 44 LNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIELL 92
Score = 59 (25.8 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 29 KDESRD-FMAIFPDLVRDLTDAGRHSDIP-DVTKWYAKVLQYN 69
K+ R+ F+ +FP LV +L + +P + WYA L YN
Sbjct: 5 KEIRRERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYN 47
>MGI|MGI:104888 [details] [associations]
symbol:Fdps "farnesyl diphosphate synthetase" species:10090
"Mus musculus" [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=ISO] [GO:0004337 "geranyltranstransferase activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005759 "mitochondrial matrix"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0008202 "steroid metabolic
process" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=ISO] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0045337 "farnesyl diphosphate biosynthetic process"
evidence=ISO] [GO:0045542 "positive regulation of cholesterol
biosynthetic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061051 "positive regulation of cell growth
involved in cardiac muscle cell development" evidence=ISO]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 MGI:MGI:104888
GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695 eggNOG:COG0142
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
HOGENOM:HOG000160912 KO:K00787 OMA:VAMQRAN CTD:2224
HOVERGEN:HBG005741 OrthoDB:EOG4ZGPCS EMBL:AF309508 EMBL:AK088601
EMBL:BC048497 IPI:IPI00120457 RefSeq:NP_001240680.1
RefSeq:NP_608219.1 UniGene:Mm.39472 UniGene:Mm.490094
ProteinModelPortal:Q920E5 SMR:Q920E5 STRING:Q920E5
PhosphoSite:Q920E5 PaxDb:Q920E5 PRIDE:Q920E5
Ensembl:ENSMUST00000081848 GeneID:110196 KEGG:mmu:110196
GeneTree:ENSGT00530000064127 InParanoid:Q920E5 NextBio:363511
Bgee:Q920E5 CleanEx:MM_FDPS Genevestigator:Q920E5
GermOnline:ENSMUSG00000059743 Uniprot:Q920E5
Length = 353
Score = 387 (141.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 75/126 (59%), Positives = 94/126 (74%)
Query: 134 SLKTSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVE 189
S +T +GQ+LDL TA DL ++T RY++IVKYKTAFYSF LP+A AM+MAG+ +
Sbjct: 164 SYQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEK 223
Query: 190 VHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQR 249
H A +L+EMG FFQVQDDYLD FG P VTGK+GTDI+D KCSWL V L RA+P QR
Sbjct: 224 EHANALKILMEMGEFFQVQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRASPQQR 283
Query: 250 KLMEVN 255
+++E N
Sbjct: 284 QILEEN 289
Score = 119 (46.9 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YN GK NRGL +V A++ L +P + E+L A +GWCVE++
Sbjct: 47 EVLEYNALGGKYNRGLTVVQAFQELVEPKKQDAESLQRALTVGWCVELL 95
Score = 56 (24.8 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 31 ESRDFMAIFPDLVRDLTDAGR-HSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIVQVLQY 89
E ++F+ F +V+ LT+ H +I D +VL+YN A+ G +VQ Q
Sbjct: 13 EKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYN-ALGGKYNRGLT-VVQAFQE 70
Query: 90 NVPSGKKN 97
V K++
Sbjct: 71 LVEPKKQD 78
>POMBASE|SPAC6F12.13c [details] [associations]
symbol:fps1 "geranyltranstransferase Fps1" species:4896
"Schizosaccharomyces pombe" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IGI] [GO:0004337
"geranyltranstransferase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006612 "protein targeting
to membrane" evidence=IC] [GO:0006696 "ergosterol biosynthetic
process" evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISO] [GO:0018342 "protein prenylation"
evidence=IC] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IMP] [GO:0004660 "protein farnesyltransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 PomBase:SPAC6F12.13c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0070317 GenomeReviews:CU329670_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006612 GO:GO:0006995 GO:GO:0006696 eggNOG:COG0142
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0018342 HOGENOM:HOG000160912 KO:K00787 EMBL:D89104 PIR:T11664
PIR:T42081 RefSeq:NP_593299.1 ProteinModelPortal:O14230
STRING:O14230 PRIDE:O14230 EnsemblFungi:SPAC6F12.13c.1
GeneID:2542898 KEGG:spo:SPAC6F12.13c OMA:KANEICI OrthoDB:EOG4SFDFW
NextBio:20803937 Uniprot:O14230
Length = 347
Score = 357 (130.7 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 71/127 (55%), Positives = 93/127 (73%)
Query: 133 VSLKTSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDV 188
V+ +T +GQ LDL TA DLSKF++ ++ IV YKTAFYSF LPVALAMH+AG+
Sbjct: 155 VTFQTELGQQLDLLTAPEDSVDLSKFSLQKHSFIVIYKTAFYSFYLPVALAMHLAGVATP 214
Query: 189 EVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ 248
E + A+ +L+ +G +FQVQDDYLDC+G P VTGKIGTDI D KCSW+ +AL + TP Q
Sbjct: 215 ENLKCAQDILIILGKYFQVQDDYLDCYGDPTVTGKIGTDILDNKCSWIINLALAKCTPEQ 274
Query: 249 RKLMEVN 255
R +++ N
Sbjct: 275 RVILDDN 281
Score = 73 (30.8 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 87 LQYNVPSGKKNRGLALVVAYK-MLAQPSELTPENLHL-AQILGWCVEIV 133
L +N GK NRGL+++ +Y+ +L P + E ++ A +LGW VE++
Sbjct: 42 LFHNTLGGKYNRGLSVIDSYEILLGHPLD---EAAYMKAAVLGWMVELL 87
Score = 54 (24.1 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 30 DESRDFMAIFPDLVRDLTDAGRHSDIPD-VTKWYAKVLQYN 69
D+ F + P V ++ + + +IPD VT+WY L +N
Sbjct: 5 DKRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHN 45
>TAIR|locus:2130654 [details] [associations]
symbol:FPS2 "farnesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IGI;ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006084 "acetyl-CoA metabolic process" evidence=RCA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IGI;IDA]
[GO:0004337 "geranyltranstransferase activity" evidence=IGI;IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695 EMBL:Z97343
EMBL:AL161545 eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 HOGENOM:HOG000160912 KO:K00787
ProtClustDB:CLSN2685869 EMBL:L46350 EMBL:L46349 EMBL:AY072207
EMBL:AY117354 IPI:IPI00520567 PIR:S71182 RefSeq:NP_193452.1
UniGene:At.21195 ProteinModelPortal:Q43315 SMR:Q43315 STRING:Q43315
PaxDb:Q43315 PRIDE:Q43315 EnsemblPlants:AT4G17190.1 GeneID:827430
KEGG:ath:AT4G17190 TAIR:At4g17190 InParanoid:Q43315 OMA:VAMQRAN
PhylomeDB:Q43315 BioCyc:ARA:AT4G17190-MONOMER
BioCyc:MetaCyc:AT4G17190-MONOMER Genevestigator:Q43315
Uniprot:Q43315
Length = 342
Score = 337 (123.7 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 67/127 (52%), Positives = 90/127 (70%)
Query: 133 VSLKTSMGQSLDLSTA----NDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDV 188
V +T+ GQ +DL T DLSK+++ + IV+YKTA+YSF LPVA A+ MAG +++
Sbjct: 153 VEFQTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAG-ENL 211
Query: 189 EVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ 248
E H +T+L++MG +FQVQDDYLDCF P+ GKIGTDIED KCSWL V AL+R + Q
Sbjct: 212 ENHTDVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQ 271
Query: 249 RKLMEVN 255
K++ N
Sbjct: 272 TKILYEN 278
Score = 124 (48.7 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 82 FIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVE 131
++ ++L YNV GK NRGL++V +YK+L Q +LT + L+ LGWC+E
Sbjct: 34 WLERMLDYNVRGGKLNRGLSVVDSYKLLKQGQDLTEKETFLSCALGWCIE 83
Score = 36 (17.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 30 DESRDFMAIFPDLVRDLTDAGRHSDIPDVTKWYAKVLQYN 69
D F+ ++ L DL + +W ++L YN
Sbjct: 3 DLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYN 42
>TAIR|locus:2160947 [details] [associations]
symbol:FPS1 "farnesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006084 "acetyl-CoA metabolic process" evidence=RCA]
[GO:0006598 "polyamine catabolic process" evidence=RCA] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009698 "phenylpropanoid metabolic process"
evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0042398 "cellular modified amino acid
biosynthetic process" evidence=RCA] [GO:0070838 "divalent metal ion
transport" evidence=RCA] [GO:0004161 "dimethylallyltranstransferase
activity" evidence=IGI;IDA] [GO:0004337 "geranyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 GO:GO:0005829 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695 EMBL:AB016886
eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:U80605 EMBL:L46367 EMBL:AF370324 EMBL:AY063112
EMBL:X75789 IPI:IPI00548843 IPI:IPI00760338 PIR:S52009
RefSeq:NP_199588.1 UniGene:At.21206 ProteinModelPortal:Q09152
SMR:Q09152 STRING:Q09152 PaxDb:Q09152 PRIDE:Q09152
EnsemblPlants:AT5G47770.1 GeneID:834828 KEGG:ath:AT5G47770
TAIR:At5g47770 HOGENOM:HOG000160912 InParanoid:Q09152 KO:K00787
OMA:FRRFEQH PhylomeDB:Q09152 ProtClustDB:CLSN2685869
BioCyc:ARA:AT5G47770-MONOMER BioCyc:MetaCyc:AT5G47770-MONOMER
Genevestigator:Q09152 GermOnline:AT5G47770 Uniprot:Q09152
Length = 384
Score = 331 (121.6 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 66/127 (51%), Positives = 90/127 (70%)
Query: 133 VSLKTSMGQSLDLSTA----NDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDV 188
V L+T+ GQ +DL T DL+K+++ + IV+YKTA+YSF LPVA A+ MAG +++
Sbjct: 195 VELQTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAG-ENL 253
Query: 189 EVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ 248
E H + +L++MG +FQVQDDYLDCF P+ GKIGTDIED KCSWL V AL+R + Q
Sbjct: 254 ENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQ 313
Query: 249 RKLMEVN 255
K++ N
Sbjct: 314 TKILYEN 320
Score = 124 (48.7 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 82 FIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVE 131
++ ++L YNV GK NRGL++V ++K+L Q ++LT + + L+ LGWC+E
Sbjct: 76 WVDRMLDYNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIE 125
>ASPGD|ASPL0000012297 [details] [associations]
symbol:AN8012 species:162425 "Emericella nidulans"
[GO:0016125 "sterol metabolic process" evidence=RCA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA;RCA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA;RCA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0004660 "protein farnesyltransferase activity" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005783 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001302
eggNOG:COG0142 GO:GO:0008299 EMBL:AACD01000139 HOGENOM:HOG000160912
KO:K00787 OMA:FRRFEQH OrthoDB:EOG4SFDFW RefSeq:XP_681281.1
ProteinModelPortal:Q5AUL8 STRING:Q5AUL8
EnsemblFungi:CADANIAT00004032 GeneID:2869054 KEGG:ani:AN8012.2
Uniprot:Q5AUL8
Length = 347
Score = 332 (121.9 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 66/122 (54%), Positives = 86/122 (70%)
Query: 136 KTSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVH 191
+T +GQ DL TA DL+ F+M++Y IV YKTA+YSF LPVALA+H + E
Sbjct: 158 QTELGQLCDLITAPEDKVDLNNFSMEKYMFIVTYKTAYYSFYLPVALALHYLQLATPENL 217
Query: 192 RQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRKL 251
RQA +L+ +G +FQVQDDYLD +G P+V GKIGTDI+D KCSWL ALQR + QRK+
Sbjct: 218 RQAHDILIPLGQYFQVQDDYLDAYGDPEVIGKIGTDIQDNKCSWLVNQALQRCSAEQRKV 277
Query: 252 ME 253
++
Sbjct: 278 LD 279
Score = 71 (30.1 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+ + NVP GK NRGL++ L Q EL+ E LGW E++
Sbjct: 40 KAIHTNVPGGKLNRGLSVPDTGVALLQ-KELSEEQYKDLATLGWLTELL 87
Score = 61 (26.5 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 35 FMAIFPDLVRDLTDAGRHSDIP-DVTKWYAKVLQYN 69
F A+FP L + D R ++P + +W++K + N
Sbjct: 10 FEAVFPSLAEAMLDHARKYNLPQNAQEWFSKAIHTN 45
>CGD|CAL0002030 [details] [associations]
symbol:ERG20 species:5476 "Candida albicans" [GO:0004161
"dimethylallyltranstransferase activity" evidence=ISS] [GO:0006696
"ergosterol biosynthetic process" evidence=ISS] [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 CGD:CAL0002030 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006696 eggNOG:COG0142
GO:GO:0008299 GO:GO:0004161 GO:GO:0004337 KO:K00787
EMBL:AACQ01000142 EMBL:AACQ01000141 RefSeq:XP_712885.1
RefSeq:XP_712917.1 ProteinModelPortal:Q59TD9 STRING:Q59TD9
GeneID:3645440 GeneID:3645472 KEGG:cal:CaO19.11967
KEGG:cal:CaO19.4491 Uniprot:Q59TD9
Length = 351
Score = 360 (131.8 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 69/127 (54%), Positives = 96/127 (75%)
Query: 133 VSLKTSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDV 188
V+ +T +GQ LDL TA+ DL KF+++++ IV +KTA+YSF LPVALAM+M+G+ D
Sbjct: 159 VTFQTELGQLLDLITADEEIVDLDKFSLEKHSFIVIFKTAYYSFYLPVALAMYMSGINDE 218
Query: 189 EVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ 248
+ +Q R +L+ +G +FQ+QDDYLDCFGTP+ GKIGTDI+D KCSW+ AL ATP Q
Sbjct: 219 KDLKQVRDILIPLGEYFQIQDDYLDCFGTPEQIGKIGTDIKDNKCSWVINQALLIATPEQ 278
Query: 249 RKLMEVN 255
R+L++ N
Sbjct: 279 RQLLDDN 285
Score = 87 (35.7 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 82 FIVQVLQYNVPSGKKNRGLALVVAYKMLAQPS--ELTPENLHLAQILGWCVEIV 133
+ V+ L YN P GK NRGL++V + +L + +L +LGW +E++
Sbjct: 38 WFVRSLNYNTPGGKLNRGLSVVDTFAILNNTTSDKLNDTEYKKVALLGWAIELL 91
Score = 55 (24.4 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 35 FMAIFPDLVRDLTDAGRHSDIP-DVTKWYAKVLQYN 69
F+ +F DLV +L ++P + +W+ + L YN
Sbjct: 11 FLDVFEDLVEELKQILVSYNMPQEAIEWFVRSLNYN 46
>UNIPROTKB|Q59TD9 [details] [associations]
symbol:ERG20 "Likely farnesyl diphosphate synthetase"
species:237561 "Candida albicans SC5314" [GO:0004161
"dimethylallyltranstransferase activity" evidence=ISS] [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0006696
"ergosterol biosynthetic process" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0002030
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006696
eggNOG:COG0142 GO:GO:0008299 GO:GO:0004161 GO:GO:0004337 KO:K00787
EMBL:AACQ01000142 EMBL:AACQ01000141 RefSeq:XP_712885.1
RefSeq:XP_712917.1 ProteinModelPortal:Q59TD9 STRING:Q59TD9
GeneID:3645440 GeneID:3645472 KEGG:cal:CaO19.11967
KEGG:cal:CaO19.4491 Uniprot:Q59TD9
Length = 351
Score = 360 (131.8 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 69/127 (54%), Positives = 96/127 (75%)
Query: 133 VSLKTSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDV 188
V+ +T +GQ LDL TA+ DL KF+++++ IV +KTA+YSF LPVALAM+M+G+ D
Sbjct: 159 VTFQTELGQLLDLITADEEIVDLDKFSLEKHSFIVIFKTAYYSFYLPVALAMYMSGINDE 218
Query: 189 EVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ 248
+ +Q R +L+ +G +FQ+QDDYLDCFGTP+ GKIGTDI+D KCSW+ AL ATP Q
Sbjct: 219 KDLKQVRDILIPLGEYFQIQDDYLDCFGTPEQIGKIGTDIKDNKCSWVINQALLIATPEQ 278
Query: 249 RKLMEVN 255
R+L++ N
Sbjct: 279 RQLLDDN 285
Score = 87 (35.7 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 82 FIVQVLQYNVPSGKKNRGLALVVAYKMLAQPS--ELTPENLHLAQILGWCVEIV 133
+ V+ L YN P GK NRGL++V + +L + +L +LGW +E++
Sbjct: 38 WFVRSLNYNTPGGKLNRGLSVVDTFAILNNTTSDKLNDTEYKKVALLGWAIELL 91
Score = 55 (24.4 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 35 FMAIFPDLVRDLTDAGRHSDIP-DVTKWYAKVLQYN 69
F+ +F DLV +L ++P + +W+ + L YN
Sbjct: 11 FLDVFEDLVEELKQILVSYNMPQEAIEWFVRSLNYN 46
>DICTYBASE|DDB_G0278735 [details] [associations]
symbol:fps "farnesyl diphosphate synthase"
species:44689 "Dictyostelium discoideum" [GO:0042493 "response to
drug" evidence=IDA;IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA;ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA;ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
[GO:0005777 "peroxisome" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 dictyBase:DDB_G0278735 GO:GO:0005829
GO:GO:0042493 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0006695
EMBL:AAFI02000024 eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 KO:K00787 OMA:VAMQRAN EMBL:AF234168
RefSeq:XP_641990.1 HSSP:P08836 ProteinModelPortal:Q9NH03
STRING:Q9NH03 EnsemblProtists:DDB0215017 GeneID:8621722
KEGG:ddi:DDB_G0278735 InParanoid:Q9NH03 ProtClustDB:CLSZ2430738
Uniprot:Q9NH03
Length = 382
Score = 337 (123.7 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 67/123 (54%), Positives = 84/123 (68%)
Query: 134 SLKTSMGQSLDLSTA---NDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEV 190
S +T +GQ LDL+T D S FT++ Y IVKYKTA+YSF LPVALAM MAG+
Sbjct: 195 SYQTELGQLLDLTTQPNRGDFSLFTLNTYRRIVKYKTAYYSFYLPVALAMLMAGITSTPA 254
Query: 191 HRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRK 250
A+ +LL MG FFQVQDD+LDC+G+P V GKIG DIE+ KCSW+ A+ TP Q
Sbjct: 255 FSTAKDILLPMGEFFQVQDDFLDCYGSPAVIGKIGRDIEENKCSWMICQAILNGTPEQIN 314
Query: 251 LME 253
L++
Sbjct: 315 LLK 317
Score = 106 (42.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 82 FIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVE 131
++ +++ NV GK NRGL ++ + ++L + +L+ + LA +LGWCVE
Sbjct: 68 WVEKMINVNVSGGKMNRGLTVLHSLQLLVEGRQLSRSEIFLANVLGWCVE 117
Score = 60 (26.2 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 28 SKDESRDFMAIFPDLVRDLTDAGRHSDIPDVT-KWYAKVLQYN 69
+K+E DF+ IFP L ++ D+P T W K++ N
Sbjct: 34 AKEELADFVEIFPILTNEILKELPGMDMPPQTIAWVEKMINVN 76
>ZFIN|ZDB-GENE-050506-78 [details] [associations]
symbol:fdps "farnesyl diphosphate synthase (farnesyl
pyrophosphate synthetase, dimethylallyltranstransferase,
geranyltranstransferase)" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
ZFIN:ZDB-GENE-050506-78 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299 HOGENOM:HOG000160912
HOVERGEN:HBG005741 EMBL:BC083515 IPI:IPI00735002 UniGene:Dr.77233
ProteinModelPortal:Q5XJ03 STRING:Q5XJ03 PRIDE:Q5XJ03
InParanoid:Q5XJ03 ArrayExpress:Q5XJ03 Bgee:Q5XJ03 Uniprot:Q5XJ03
Length = 359
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 87/152 (57%), Positives = 109/152 (71%)
Query: 106 YKMLAQPSELTPENLHLAQILGWCVEIVSLKTSMGQSLDLSTAN----DLSKFTMDRYEA 161
Y++L + P +HL ++ E S +T +GQ+LDL TA DL++FTM+RY+A
Sbjct: 146 YRLLRRHCRGQPYYVHLLELF---TE-TSFQTELGQALDLMTAPPHKIDLNRFTMERYKA 201
Query: 162 IVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVT 221
IVKYKTAFYSF LPVA AM+MAG+++ H A+T+LLEMG FFQ+QDDYLDCFG P VT
Sbjct: 202 IVKYKTAFYSFYLPVAAAMYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDCFGDPAVT 261
Query: 222 GKIGTDIEDGKCSWLAVVALQRATPAQRKLME 253
GKIGTDI+D KCSWL V AL TP QR +E
Sbjct: 262 GKIGTDIQDNKCSWLVVTALGIMTPEQRAELE 293
Score = 147 (56.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VLQYN P GK+NRGL+++ + + L PSEL E +H A ++GWC+E++
Sbjct: 53 EVLQYNAPGGKRNRGLSVIGSLRELVSPSELPTEEVHRALLVGWCIELL 101
>UNIPROTKB|G3MZT9 [details] [associations]
symbol:G3MZT9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
GeneTree:ENSGT00530000064127 EMBL:DAAA02053390
Ensembl:ENSBTAT00000064336 OMA:SEYERES Uniprot:G3MZT9
Length = 330
Score = 309 (113.8 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 64/113 (56%), Positives = 81/113 (71%)
Query: 143 LDLSTANDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQARTLLLEMG 202
LDL ++ + T+D A YKTAFYSF LPVA AM+MAG+ + H A+ ++LEMG
Sbjct: 163 LDLIEQTEIGQ-TLDLITA--PYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKIVLEMG 219
Query: 203 HFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRKLMEVN 255
FFQ+QDDYLD FG P VTGKIGTD +D KCSWL V LQRA+P QR++++ N
Sbjct: 220 EFFQIQDDYLDLFGDPSVTGKIGTD-QD-KCSWLVVQCLQRASPEQRQILQEN 270
Score = 126 (49.4 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YN GK NRGL +VV ++ L +P + P++L A +GWCVE++
Sbjct: 56 EVLEYNAIGGKYNRGLTVVVTFRELVEPGKEDPDSLQRALTVGWCVELL 104
Score = 62 (26.9 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 29/103 (28%), Positives = 45/103 (43%)
Query: 31 ESRDFMAIFPDLVRDLT--DAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIVQVLQ 88
E +DF+ F V+ LT D G H +I D +VL+YN AI G +V +
Sbjct: 22 ERQDFIQHFSQTVKVLTEEDIG-HPEIGDAITRLKEVLEYN-AIGGKYNRGLTVVVTFRE 79
Query: 89 YNVPSGKKNRGL--ALVVAYKM-LAQPSELTPENLHLAQILGW 128
P + L AL V + + L Q L +++ + + W
Sbjct: 80 LVEPGKEDPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRW 122
>UNIPROTKB|P08836 [details] [associations]
symbol:FDPS "Farnesyl pyrophosphate synthase" species:9031
"Gallus gallus" [GO:0006695 "cholesterol biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=IEA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 HOVERGEN:HBG005741 IPI:IPI00584175 PDB:1FPS PDB:1UBV
PDB:1UBW PDB:1UBX PDB:1UBY PDBsum:1FPS PDBsum:1UBV PDBsum:1UBW
PDBsum:1UBX PDBsum:1UBY ProteinModelPortal:P08836 SMR:P08836
EvolutionaryTrace:P08836 Uniprot:P08836
Length = 367
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 83/154 (53%), Positives = 108/154 (70%)
Query: 106 YKMLAQPSELTPENLHLAQILGWCVEIVSLKTSMGQSLDLSTAN----DLSKFTMDRYEA 161
Y++L + P +HL ++ ++ + +T +GQ LDL TA DLS F+ +RY+A
Sbjct: 154 YRVLKKYCRQRPYYVHLLELF---LQ-TAYQTELGQMLDLITAPVSKVDLSHFSEERYKA 209
Query: 162 IVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVT 221
IVKYKTAFYSF LPVA AM+M G+ E H A+ +LLEMG +FQ+QDDYLDCFG P +T
Sbjct: 210 IVKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPALT 269
Query: 222 GKIGTDIEDGKCSWLAVVALQRATPAQRKLMEVN 255
GK+GTDI+D KCSWL V LQR TP QR+L+E N
Sbjct: 270 GKVGTDIQDNKCSWLVVQCLQRVTPEQRQLLEDN 303
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEI 132
+VLQYN P GK NRGL +V AY+ L+ P + E+L A +GWC+E+
Sbjct: 61 EVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIEL 108
>UNIPROTKB|G4MLE9 [details] [associations]
symbol:MGG_08649 "Farnesyl pyrophosphate synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CM001231 GO:GO:0045337 KO:K00787
RefSeq:XP_003711082.1 ProteinModelPortal:G4MLE9
EnsemblFungi:MGG_08649T0 GeneID:2678891 KEGG:mgr:MGG_08649
Uniprot:G4MLE9
Length = 348
Score = 324 (119.1 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 68/127 (53%), Positives = 85/127 (66%)
Query: 133 VSLKTSMGQSLDLSTAND----LSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDV 188
V+ +T +GQ DL TA + L F+M++Y IV YKTA+YSF LPVALA+H +
Sbjct: 156 VTYQTEIGQLCDLLTAPEDKVNLDNFSMEKYRFIVIYKTAYYSFYLPVALALHQLNIGTP 215
Query: 189 EVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ 248
E + A +L+ MG +FQVQDDYLD FG P+ GKIGTDI D KCSWL AL ATP Q
Sbjct: 216 ENLKVAEDILIPMGEYFQVQDDYLDNFGLPEHIGKIGTDIMDNKCSWLVNQALSIATPEQ 275
Query: 249 RKLMEVN 255
RK++E N
Sbjct: 276 RKILEEN 282
Score = 57 (25.1 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 28 SKDESRDFMAIFPDLVRDLTDAGRHSDIPD-VTKWYAKVLQYN 69
SK ++F A+FP L L + + +P WY K L+ N
Sbjct: 4 SKTTLQEFEAVFPKLEEVLLEHAKSYKLPQGEMAWYKKSLETN 46
Score = 56 (24.8 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 87 LQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
L+ N GK NRG+++ + L + L+ + A LGW E++
Sbjct: 43 LETNAIGGKCNRGMSVPDSVSALLE-RPLSEDEYFKAATLGWMTELL 88
>RGD|68953 [details] [associations]
symbol:Fdps "farnesyl diphosphate synthase" species:10116 "Rattus
norvegicus" [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI] [GO:0004337 "geranyltranstransferase activity"
evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005777
"peroxisome" evidence=IDA] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0008584 "male gonad development" evidence=IEP] [GO:0033384
"geranyl diphosphate biosynthetic process" evidence=IEA] [GO:0033574
"response to testosterone stimulus" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0043434 "response to peptide
hormone stimulus" evidence=IEP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA;IDA] [GO:0045542 "positive
regulation of cholesterol biosynthetic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0061051 "positive
regulation of cell growth involved in cardiac muscle cell
development" evidence=IMP] [GO:0070723 "response to cholesterol"
evidence=IEP] [GO:0071398 "cellular response to fatty acid"
evidence=IEP] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 RGD:68953 GO:GO:0005777
GO:GO:0042493 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0005759 GO:GO:0046872 GO:GO:0043434 GO:GO:0007283
GO:GO:0006695 GO:GO:0045542 GO:GO:0008584 GO:GO:0071398
GO:GO:0070723 GO:GO:0033574 GO:GO:0061051 eggNOG:COG0142
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 HOGENOM:HOG000160912 KO:K00787 CTD:2224
HOVERGEN:HBG005741 OrthoDB:EOG4ZGPCS EMBL:M34477 EMBL:M17300
EMBL:BC059125 IPI:IPI00325147 PIR:A34713 PIR:B34713
RefSeq:NP_114028.1 UniGene:Rn.2848 ProteinModelPortal:P05369
SMR:P05369 STRING:P05369 PhosphoSite:P05369 PRIDE:P05369
GeneID:83791 KEGG:rno:83791 UCSC:RGD:68953 SABIO-RK:P05369
ChEMBL:CHEMBL1075093 NextBio:616373 ArrayExpress:P05369
Genevestigator:P05369 Uniprot:P05369
Length = 353
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 93/204 (45%), Positives = 126/204 (61%)
Query: 61 WYAKVLQYNKAISNNVYLGTYFIV-QVLQYNVPS-GKK--NRGLALVVA-YKMLAQPSEL 115
W ++LQ + +++ +Y Q+ Y P G N L L A Y++L
Sbjct: 90 WCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEAAIYRLLKFYCRE 149
Query: 116 TPENLHLAQILGWCVEIVSLKTSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYS 171
P L+L ++ ++ S +T +GQ+LDL TA DL ++T RY++IVKYKTAFYS
Sbjct: 150 QPYYLNLLELF---LQS-SYQTEIGQTLDLITAPQGQVDLGRYTEKRYKSIVKYKTAFYS 205
Query: 172 FQLPVALAMHMAGMQDVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDG 231
F LP+A AM+MAG+ + H A +LLEMG FFQ+QDDYLD FG P VTGK+GTDI+D
Sbjct: 206 FYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQIQDDYLDLFGDPSVTGKVGTDIQDN 265
Query: 232 KCSWLAVVALQRATPAQRKLMEVN 255
KCSWL V L RATP QR+++E N
Sbjct: 266 KCSWLVVQCLLRATPQQRQILEEN 289
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 83 IVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
I +VL+YN GK NRGL +V ++ L +P + E+L A +GWCVE++
Sbjct: 45 IKEVLEYNTVGGKYNRGLTVVQTFQELVEPRKQDAESLQRALTVGWCVELL 95
>UNIPROTKB|F1LND7 [details] [associations]
symbol:Fdps "Farnesyl pyrophosphate synthase" species:10116
"Rattus norvegicus" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
RGD:68953 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 GO:GO:0008299 IPI:IPI00325147
GeneTree:ENSGT00530000063878 Ensembl:ENSRNOT00000065065
ArrayExpress:F1LND7 Uniprot:F1LND7
Length = 287
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 84/162 (51%), Positives = 109/162 (67%)
Query: 97 NRGLALVVA-YKMLAQPSELTPENLHLAQILGWCVEIVSLKTSMGQSLDLSTAN----DL 151
N L L A Y++L P L+L ++ ++ S +T +GQ+LDL TA DL
Sbjct: 130 NDALLLEAAIYRLLKFYCREQPYYLNLLELF---LQS-SYQTEIGQTLDLITAPQGQVDL 185
Query: 152 SKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQARTLLLEMGHFFQVQDDY 211
++T RY++IVKYKTAFYSF LP+A AM+MAG+ + H A +LLEMG FFQ+QDDY
Sbjct: 186 GRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQIQDDY 245
Query: 212 LDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRKLME 253
LD FG P VTGK+GTDI+D KCSWL V L RATP QR+++E
Sbjct: 246 LDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRATPQQRQILE 287
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 83 IVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
I +VL+YN GK NRGL +V ++ L +P + E+L A +GWCVE++
Sbjct: 45 IKEVLEYNTVGGKYNRGLTVVQTFQELVEPRKQDAESLQRALTVGWCVELL 95
>DICTYBASE|DDB_G0278823 [details] [associations]
symbol:DDB_G0278823 "putative farnesyl pyrophosphate
synthetase" species:44689 "Dictyostelium discoideum" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0006695 "cholesterol biosynthetic process" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 dictyBase:DDB_G0278823 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 EMBL:AAFI02000024 eggNOG:COG0142 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 KO:K00787
ProtClustDB:CLSZ2430738 HSSP:P14324 RefSeq:XP_641989.1
ProteinModelPortal:Q54XP1 STRING:Q54XP1 EnsemblProtists:DDB0206219
GeneID:8621721 KEGG:ddi:DDB_G0278823 InParanoid:Q54XP1 OMA:FADPNTI
Uniprot:Q54XP1
Length = 356
Score = 290 (107.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 57/121 (47%), Positives = 79/121 (65%)
Query: 136 KTSMGQSLDLSTA---NDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHR 192
+T +GQ LDL+T D S + + I +YKTA+YSF PVALAM M+ + +
Sbjct: 170 QTQLGQLLDLTTQPIRGDFSSINLKNHTRITEYKTAYYSFFFPVALAMLMSKINHEQAFT 229
Query: 193 QARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRKLM 252
A+ +LL MG +FQVQDD+LDC+G+P+V GKIG DIE+ KCSW+ A+ TP Q L+
Sbjct: 230 TAKDILLPMGVYFQVQDDFLDCYGSPEVFGKIGRDIEENKCSWMICQAILNGTPDQINLL 289
Query: 253 E 253
+
Sbjct: 290 K 290
Score = 99 (39.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 81 YFIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEI 132
++I V++ N GK NRG++++ + + L + LT + AQ LGWCVEI
Sbjct: 41 HWIETVIKANSTGGKMNRGISVLESLESLNEGRALTRHEIFQAQTLGWCVEI 92
>UNIPROTKB|F1N0Q7 [details] [associations]
symbol:RUSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] Pfam:PF00018 InterPro:IPR000092
InterPro:IPR001452 Pfam:PF00348 PROSITE:PS00723 PROSITE:PS50002
SMART:SM00326 GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 SUPFAM:SSF50044 GO:GO:0008299
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00530000063878 EMBL:DAAA02007155 IPI:IPI00904174
Ensembl:ENSBTAT00000009272 ArrayExpress:F1N0Q7 Uniprot:F1N0Q7
Length = 869
Score = 231 (86.4 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 48/82 (58%), Positives = 62/82 (75%)
Query: 134 SLKTSMGQSLDLSTA---N-DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVE 189
S +T +GQ+LDL TA N DL +FT RY++IVKYKTAFYSF LPVA AM+MAG+ +
Sbjct: 232 SYQTEIGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEK 291
Query: 190 VHRQARTLLLEMGHFFQVQDDY 211
H A+ +LLEMG FFQ+Q++Y
Sbjct: 292 EHAHAKKILLEMGEFFQIQENY 313
Score = 126 (49.4 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 85 QVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+VL+YN GK NRGL +V+ ++ L +P + P++L A +GWCVE++
Sbjct: 115 EVLEYNAIGGKYNRGLTVVITFRELVEPGKQDPDSLQRALTVGWCVELL 163
Score = 63 (27.2 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 31 ESRDFMAIFPDLVRDLT--DAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIVQVLQ 88
E +DF+ F +V+ LT D G H +I D +VL+YN AI G ++ +
Sbjct: 81 ERQDFIQHFSQIVKVLTEEDIG-HPEIGDAITRLKEVLEYN-AIGGKYNRGLTVVITFRE 138
Query: 89 YNVPSGKKN 97
P GK++
Sbjct: 139 LVEP-GKQD 146
>UNIPROTKB|F1M2I4 [details] [associations]
symbol:F1M2I4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
IPI:IPI00565016 Ensembl:ENSRNOT00000040484 Uniprot:F1M2I4
Length = 281
Score = 255 (94.8 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 56/107 (52%), Positives = 66/107 (61%)
Query: 141 QSLDLSTA----NDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQART 196
QS+DL TA L +T RY+ +VK K A F A++MAG+ E H A
Sbjct: 151 QSVDLITAPQGHGHLGGYTEKRYKYVVKNKAALL-FPPAYTAAVYMAGIDGEEEHANALK 209
Query: 197 LLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQR 243
+LLEMG FFQVQDDYLD F P VTGK+ TDI+D KCSWL V LQR
Sbjct: 210 ILLEMGEFFQVQDDYLDLFADPSVTGKVSTDIQDNKCSWLVVQCLQR 256
Score = 64 (27.6 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 89 YNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWC 129
Y GK + GL +V A++ L +P + +L A +GWC
Sbjct: 38 YPGQGGKYSWGLMVVQAFQELVEPRKQDAASLQPALTVGWC 78
>POMBASE|SPBC36.06c [details] [associations]
symbol:spo9 "farnesyl pyrophosphate synthetase"
species:4896 "Schizosaccharomyces pombe" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006612 "protein targeting
to membrane" evidence=IC] [GO:0006696 "ergosterol biosynthetic
process" evidence=ISS] [GO:0016117 "carotenoid biosynthetic
process" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IMP] [GO:0030437 "ascospore formation" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 PomBase:SPBC36.06c
GO:GO:0005829 GO:GO:0005634 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006612 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0030437 GO:GO:0016117 GO:GO:0006696
eggNOG:COG0142 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 GO:GO:0004660
GO:GO:0018342 HOGENOM:HOG000160912 KO:K00787 PIR:T40301
RefSeq:NP_595334.1 HSSP:P14324 ProteinModelPortal:O59703
STRING:O59703 EnsemblFungi:SPBC36.06c.1 GeneID:2540933
KEGG:spo:SPBC36.06c OMA:DIQENKC OrthoDB:EOG4NPBDJ NextBio:20802048
Uniprot:O59703
Length = 351
Score = 244 (91.0 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 50/127 (39%), Positives = 76/127 (59%)
Query: 133 VSLKTSMGQSLDLSTAND----LSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDV 188
V+ T +GQ DL ++ D L F + +Y+ I+ YKT+FYSF LP+ A+ ++ +
Sbjct: 159 VTFLTELGQQEDLLSSRDGEASLRSFDLMKYDFIITYKTSFYSFYLPIKCALLLSRNSNQ 218
Query: 189 EVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ 248
+ + L +G++FQVQDDYLDCFG V GK+G DI+D KC+WL A + A+ Q
Sbjct: 219 KAYDTTIKLSKLLGYYFQVQDDYLDCFGDYTVLGKVGMDIQDNKCTWLVCYAEKFASADQ 278
Query: 249 RKLMEVN 255
L+ +
Sbjct: 279 LNLLRAH 285
Score = 71 (30.1 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 87 LQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
++ N GK NRGLA++ + L EL A +LGW +EI+
Sbjct: 47 IKRNTLGGKNNRGLAVLQSLTSLIN-RELEEAEFRDAALLGWLIEIL 92
>WB|WBGene00011058 [details] [associations]
symbol:fdps-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0000003
eggNOG:COG0142 GO:GO:0008299 HOGENOM:HOG000160912 KO:K00787
GeneTree:ENSGT00530000064127 HSSP:P08836 OMA:DIQENKC EMBL:Z81106
PIR:D87933 PIR:T23962 RefSeq:NP_493027.1 ProteinModelPortal:O62336
SMR:O62336 STRING:O62336 PaxDb:O62336 EnsemblMetazoa:R06C1.2
GeneID:173075 KEGG:cel:CELE_R06C1.2 UCSC:R06C1.2 CTD:173075
WormBase:R06C1.2 InParanoid:O62336 NextBio:878175 Uniprot:O62336
Length = 352
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 56/122 (45%), Positives = 82/122 (67%)
Query: 136 KTSMGQSLDLSTANDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQAR 195
KT +GQ LD S+ N +S FT DRYE +V+ KT+ Y+ P+ +A+ ++ + + H +
Sbjct: 162 KTLIGQFLDTSSVNQISSFTWDRYELMVENKTSHYTVFHPIQMALIISDV--LAYHGSVK 219
Query: 196 TLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRA--TPAQ--RKL 251
+ ++G FQ QDD+LD +G P +TGKIGTDI+DGKC+WLAV ALQ+ TP + KL
Sbjct: 220 KVAYQIGFLFQSQDDFLDVYGDPKITGKIGTDIQDGKCTWLAVRALQKMHKTPEKWGAKL 279
Query: 252 ME 253
+E
Sbjct: 280 IE 281
>GENEDB_PFALCIPARUM|PF11_0295 [details] [associations]
symbol:PF11_0295 "farnesyl pyrophosphate
synthase, putative" species:5833 "Plasmodium falciparum"
[GO:0004337 "geranyltranstransferase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE014186 GO:GO:0008299 GO:GO:0004337
HOGENOM:HOG000160912 KO:K00787 RefSeq:XP_001347966.2
ProteinModelPortal:Q8II79 EnsemblProtists:PF11_0295:mRNA
GeneID:810842 KEGG:pfa:PF11_0295 EuPathDB:PlasmoDB:PF3D7_1128400
ProtClustDB:CLSZ2432712 BindingDB:Q8II79 ChEMBL:CHEMBL3283
Uniprot:Q8II79
Length = 376
Score = 195 (73.7 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 36/112 (32%), Positives = 68/112 (60%)
Query: 142 SLDLSTAN--DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQ-DVEVHRQARTLL 198
++++S N +++ Y+ I+ +KTA+YSF LP+ M M G+ D ++++ +
Sbjct: 197 NINISQENKININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQMGGISLDNLLYKKVENIA 256
Query: 199 LEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRK 250
+ MG +FQV DDY+D FG TGK+G+DI++ K +W + A + + +++
Sbjct: 257 ILMGEYFQVHDDYIDTFGDSKKTGKVGSDIQNNKLTWPLIKAFELCSQPEKE 308
Score = 72 (30.4 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 76 VYLGTYFIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+ + Y+ + + YN GK NRG+ +++ Y+ + ++ + WC+EI+
Sbjct: 43 IIISKYYKL-LFDYNCLGGKNNRGILVILIYEYVKN-RDINCNEWEKVACIAWCIEIL 98
Score = 40 (19.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 106 YKMLAQPSELTPENLHLAQILGWCVEIVSLKTSMGQSLDLSTAND 150
YK+L L +N +L I + +LKT +GQ LD + +D
Sbjct: 144 YKLL--DVYLRNDNCYLDLITSF--REATLKTIVGQHLDTNIFSD 184
>UNIPROTKB|Q8II79 [details] [associations]
symbol:PF11_0295 "Farnesyl pyrophosphate synthase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE014186 GO:GO:0008299 GO:GO:0004337
HOGENOM:HOG000160912 KO:K00787 RefSeq:XP_001347966.2
ProteinModelPortal:Q8II79 EnsemblProtists:PF11_0295:mRNA
GeneID:810842 KEGG:pfa:PF11_0295 EuPathDB:PlasmoDB:PF3D7_1128400
ProtClustDB:CLSZ2432712 BindingDB:Q8II79 ChEMBL:CHEMBL3283
Uniprot:Q8II79
Length = 376
Score = 195 (73.7 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 36/112 (32%), Positives = 68/112 (60%)
Query: 142 SLDLSTAN--DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQ-DVEVHRQARTLL 198
++++S N +++ Y+ I+ +KTA+YSF LP+ M M G+ D ++++ +
Sbjct: 197 NINISQENKININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQMGGISLDNLLYKKVENIA 256
Query: 199 LEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRK 250
+ MG +FQV DDY+D FG TGK+G+DI++ K +W + A + + +++
Sbjct: 257 ILMGEYFQVHDDYIDTFGDSKKTGKVGSDIQNNKLTWPLIKAFELCSQPEKE 308
Score = 72 (30.4 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 76 VYLGTYFIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIV 133
+ + Y+ + + YN GK NRG+ +++ Y+ + ++ + WC+EI+
Sbjct: 43 IIISKYYKL-LFDYNCLGGKNNRGILVILIYEYVKN-RDINCNEWEKVACIAWCIEIL 98
Score = 40 (19.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 106 YKMLAQPSELTPENLHLAQILGWCVEIVSLKTSMGQSLDLSTAND 150
YK+L L +N +L I + +LKT +GQ LD + +D
Sbjct: 144 YKLL--DVYLRNDNCYLDLITSF--REATLKTIVGQHLDTNIFSD 184
>DICTYBASE|DDB_G0268742 [details] [associations]
symbol:DDB_G0268742 species:44689 "Dictyostelium
discoideum" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045337 "farnesyl diphosphate biosynthetic process"
evidence=IEA] [GO:0033384 "geranyl diphosphate biosynthetic
process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
dictyBase:DDB_G0268742 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006695
EMBL:AAFI02000004 eggNOG:COG0142 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 KO:K00787 HSSP:P14324 OMA:DIQENKC
RefSeq:XP_646923.1 ProteinModelPortal:Q55EU7 STRING:Q55EU7
EnsemblProtists:DDB0190001 GeneID:8616611 KEGG:ddi:DDB_G0268742
InParanoid:Q55EU7 Uniprot:Q55EU7
Length = 393
Score = 140 (54.3 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 195 RTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWL 236
+ + +G + Q QDDY DCFG P V GK GTDI++ KCSWL
Sbjct: 267 KNICFNLGIYGQAQDDYFDCFGDPKVIGKTGTDIQENKCSWL 308
Score = 63 (27.2 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 137 TSMGQSLDLSTAN----DLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQD 187
T+ GQ LD S+ + D + FT + Y I K++ + F L + +A+ + + D
Sbjct: 186 TATGQLLDSSSFHLKRGDFTNFTFENYSQICINKSSHHVFYLQIKIAILLTDIMD 240
Score = 53 (23.7 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 121 HLAQILGWCVEIVS 134
H A+I+GWC+E +S
Sbjct: 95 HEARIIGWCLEFLS 108
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 117 (46.2 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 130 VEIVSLKTSM---GQSLDLSTANDLSKFTMDRYEAIVKYKTAFYSFQLPVAL-AMHMAGM 185
++++S T++ G+ L L +DL + T +RY +VK KTA L A A + G
Sbjct: 130 LKVISGATTIIAEGEVLQLLCTSDL-EMTQERYIEVVKSKTAVL---LSAACEAGAILGT 185
Query: 186 QDVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGK-IGTDIEDGKCSWLAVVALQRA 244
E R +++G FQ+ DD LD + + GK IG D+E+GK + + L +
Sbjct: 186 SSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHTLMKC 245
Query: 245 TPAQRK 250
+ +R+
Sbjct: 246 SDEERE 251
Score = 48 (22.0 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 66 LQYNKAISNNVYLGTYFIVQVLQYNVPSG-KKNRGLALVVAYKM 108
LQ+ K + ++VYL I +V +Y + SG K+ R + L+++ K+
Sbjct: 17 LQFRKDLESDVYL----IRKVGEYVLASGGKRIRPMLLLLSAKL 56
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 110 (43.8 bits), Expect = 0.00091, P = 0.00091
Identities = 37/128 (28%), Positives = 64/128 (50%)
Query: 130 VEIVSLKTSM---GQSLDLSTANDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQ 186
++I+S T++ G+ L L ND S T + Y ++ KTA F+ LA +A Q
Sbjct: 136 MDILSEATNIVAEGEVLQLMNCNDAST-TEESYMQVIYCKTAKL-FEAATRLAAVIA-KQ 192
Query: 187 DVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGK-IGTDIEDGKCSWLAVVALQRAT 245
D ++ + +G FQ+ DD +D GK +G D+ +GK + + A++
Sbjct: 193 DAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHGN 252
Query: 246 PAQRKLME 253
AQ+KL++
Sbjct: 253 EAQQKLIK 260
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 255 255 0.00085 114 3 11 22 0.43 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 600 (64 KB)
Total size of DFA: 185 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 20.92u 0.08s 21.00t Elapsed: 00:00:37
Total cpu time: 20.92u 0.08s 21.00t Elapsed: 00:00:39
Start: Thu Aug 15 13:39:31 2013 End: Thu Aug 15 13:40:10 2013