Diaphorina citri psyllid: psy9101

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
ISTSSVLSQKSKILSHDPPLAATNTVLSKDESRDFMAIFPDLVRDLTDAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIVSLKTSMGQSLDLSTANDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRKLMEVN
cccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHccccccccccccccccHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHc
******************************ESRDFMAIFPDLVRDLTDAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIVSLKTSMGQSLDLSTANDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQ*KLM***
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ISTSSVLSQKSKILSHDPPLAATNTVLSKDESRDFMAIFPDLVRDLTDAGRHSDIPDVTKWYAKVLQYNKAISNNVYLGTYFIVQVLQYNVPSGKKNRGLALVVAYKMLAQPSELTPENLHLAQILGWCVEIVSLKTSMGQSLDLSTANDLSKFTMDRYEAIVKYKTAFYSFQLPVALAMHMAGMQDVEVHRQARTLLLEMGHFFQVQDDYLDCFGTPDVTGKIGTDIEDGKCSWLAVVALQRATPAQRKLMEVN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Farnesyl pyrophosphate synthase Key enzyme in isoprenoid biosynthesis which catalyzes the formation of farnesyl diphosphate (FPP), a precursor for several classes of essential metabolites including sterols, dolichols, carotenoids, and ubiquinones. FPP also serves as substrate for protein farnesylation and geranylgeranylation. Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.confidentQ8WMY2
Farnesyl pyrophosphate synthase Key enzyme in isoprenoid biosynthesis which catalyzes the formation of farnesyl diphosphate (FPP), a precursor for several classes of essential metabolites including sterols, dolichols, carotenoids, and ubiquinones. FPP also serves as substrate for protein farnesylation and geranylgeranylation. Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.confidentP05369
Farnesyl pyrophosphate synthase Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.confidentP49349

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0016126 [BP]sterol biosynthetic processprobableGO:1901576, GO:0044710, GO:0016125, GO:0006629, GO:0044238, GO:0046165, GO:0044281, GO:0006066, GO:0071704, GO:0009058, GO:0044711, GO:1901360, GO:0006694, GO:0008152, GO:0044283, GO:0008150, GO:1901615, GO:1901362, GO:1901617, GO:0008202, GO:0008610
GO:0008299 [BP]isoprenoid biosynthetic processprobableGO:0071704, GO:1901576, GO:0044710, GO:0006629, GO:0044238, GO:0006720, GO:0009987, GO:0044237, GO:0044249, GO:0009058, GO:0008150, GO:0008152, GO:0044255, GO:0008610
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005777 [CC]peroxisomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0042579, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.10(2E,6E)-farnesyl diphosphate synthase.probable
2.5.1.1Transferred entry: 2.5.1.18.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QIS, chain A
Confidence level:very confident
Coverage over the Query: 30-66,88-254
View the alignment between query and template
View the model in PyMOL
Template: 1RQJ, chain A
Confidence level:very confident
Coverage over the Query: 68-253
View the alignment between query and template
View the model in PyMOL