RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9102
(277 letters)
>d2djka1 c.47.1.2 (A:1-133) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 133
Score = 81.5 bits (201), Expect = 6e-20
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 3/99 (3%)
Query: 5 GTNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYA 64
+++ +A+ F F +K+
Sbjct: 36 ERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNL-KTDKFPAFAIQEVAKNQKFP 94
Query: 65 MKD--EFSVENLESFLTKVVAGEVDPYIKSEPVPEDNSG 101
E + E +++F+ VAG+++P IKSEP+PE G
Sbjct: 95 FDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQEG 133
Score = 80.7 bits (199), Expect = 8e-20
Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 3/98 (3%)
Query: 135 TNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAM 194
+++ +A+ F F +K+
Sbjct: 37 RKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNL-KTDKFPAFAIQEVAKNQKFPF 95
Query: 195 KD--EFSVENLESFLTKVVAGEVDPYIKSEPVPEDNSG 230
E + E +++F+ VAG+++P IKSEP+PE G
Sbjct: 96 DQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQEG 133
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 70.6 bits (172), Expect = 7e-16
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Query: 90 IKSEPVPEDNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGF 149
+KS+ + E+ V V KN DE+V + +KDVLV +YAPWCGHC
Sbjct: 1 VKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYA 60
Query: 150 ADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
I+ D ++++ + P+ ++ + + + S+++L F+ +
Sbjct: 61 NATSDVLIAKLDHTENDVRGVVIEGYPTIV--LYPGGKKSESVVYQGSRSLDSLFDFIKE 118
Query: 210 VVAGEVDPYIKSEPVPE 226
+VD E E
Sbjct: 119 NGHFDVDGKALYEEAQE 135
Score = 63.3 bits (153), Expect = 3e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 219 IKSEPVPEDNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
+KS+ + E+ V V KN DE+V + +KDVLV +YAPWCGHCK+L P Y+E+ +
Sbjct: 1 VKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADT 58
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 60.2 bits (145), Expect = 3e-12
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 101 GPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAK 160
GPV V VAKN++E+V ++ KDVL+EFYAPWCGHC ++ +A
Sbjct: 2 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPK-YEELGALYAKSEFKDRVVI 60
Query: 161 DDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
N+ + ++ G+ +VE+L F+ +
Sbjct: 61 AKVDATANDVPDEIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAE 109
Score = 56.0 bits (134), Expect = 9e-11
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 230 GPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
GPV V VAKN++E+V ++ KDVL+EFYAPWCGHCK L P YEE+G
Sbjct: 2 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGAL 48
>d2b5ea3 c.47.1.2 (A:240-364) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 125
Score = 54.2 bits (130), Expect = 5e-10
Identities = 11/96 (11%), Positives = 22/96 (22%), Gaps = 15/96 (15%)
Query: 6 TNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAM 65
++ ++AK F F + KY +
Sbjct: 31 LEEYKPLFTELAKKNRGLMNFVSIDARKFGRHAGNLNMK--EQFPLFAIHDMTEDLKYGL 88
Query: 66 -------------KDEFSVENLESFLTKVVAGEVDP 88
K + +ES + + G+ P
Sbjct: 89 PQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASP 124
Score = 54.2 bits (130), Expect = 5e-10
Identities = 11/96 (11%), Positives = 22/96 (22%), Gaps = 15/96 (15%)
Query: 135 TNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAM 194
++ ++AK F F + KY +
Sbjct: 31 LEEYKPLFTELAKKNRGLMNFVSIDARKFGRHAGNLNMK--EQFPLFAIHDMTEDLKYGL 88
Query: 195 -------------KDEFSVENLESFLTKVVAGEVDP 217
K + +ES + + G+ P
Sbjct: 89 PQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASP 124
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 53.2 bits (127), Expect = 9e-10
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 7/108 (6%)
Query: 108 AKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHEL 167
+F++ V +V+F + K A A D+
Sbjct: 9 ELSFEKTVERF-PYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELE 67
Query: 168 N-EFGFDYVPSDKPLVFVRAEDGKKYAMKD-----EFSVENLESFLTK 209
N G Y DK + G + +++NL++F++
Sbjct: 68 NKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSA 115
Score = 51.2 bits (122), Expect = 5e-09
Identities = 6/41 (14%), Positives = 13/41 (31%), Gaps = 3/41 (7%)
Query: 237 AKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEKA 277
+F++ V +V+F K + + A
Sbjct: 9 ELSFEKTVERF-PYSVVKFDIASPYGEKH--EAFTAFSKSA 46
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 51.7 bits (123), Expect = 3e-09
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
Query: 100 SGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISA 159
S + +FD V + +LV+F+A WCG C ++A + K T A
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD-EIADEYQGKLTVAKLN 59
Query: 160 KDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKD-EFSVENLESFLTKVVA 212
D ++G +P+ + ++G+ A K S L+ FL +A
Sbjct: 60 IDQNPGTAPKYGIRGIPT-----LLLFKNGEVAATKVGALSKGQLKEFLDANLA 108
Score = 47.1 bits (111), Expect = 9e-08
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 229 SGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
S + +FD V + +LV+F+A WCG CK + P+ +E+ ++
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADE 48
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 51.8 bits (123), Expect = 3e-09
Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 2/115 (1%)
Query: 95 VPEDNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFT 154
PE+ V V NF E + + K +LVEFYAPWCGHC K A+
Sbjct: 2 APEEEDH-VLVLRKSNFAEALAAH-KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSE 59
Query: 155 FAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
++ D + + F + +++ ++L K
Sbjct: 60 IRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKK 114
Score = 43.3 bits (101), Expect = 3e-06
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 224 VPEDNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYE 271
PE+ V V NF E + + K +LVEFYAPWCGHCK L P Y
Sbjct: 2 APEEEDH-VLVLRKSNFAEALAAH-KYLLVEFYAPWCGHCKALAPEYA 47
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 49.0 bits (116), Expect = 2e-08
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 7/111 (6%)
Query: 100 SGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISA 159
S V F+ V E+ VLV F+A WCG C I A ++D+
Sbjct: 1 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPC-QLMSPLINLAANTYSDRLKVVKLE 59
Query: 160 KDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKD-EFSVENLESFLTK 209
D + ++ + VP+ L V+ + + S + L SFL
Sbjct: 60 IDPNPTTVKKYKVEGVPA---LRLVK--GEQILDSTEGVISKDKLLSFLDT 105
Score = 42.1 bits (98), Expect = 6e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 229 SGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHC 263
S V F+ V E+ VLV F+A WCG C
Sbjct: 1 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPC 35
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 119
Score = 46.8 bits (110), Expect = 2e-07
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 91 KSEPVPEDNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFA 150
+ E V ++S VK+ +F+E + + VL EF+APWCGHC N +
Sbjct: 1 QQEAVAPEDSAVVKL-ATDSFNEYI-QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVE 58
Query: 151 DKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
T A + Q E PS +F ++ + + E + F+ K
Sbjct: 59 KNITLAQIDCTENQDLCMEHNIPGFPS--LKIFKNSDVNNSIDYEGPRTAEAIVQFMIK 115
Score = 38.7 bits (89), Expect = 1e-04
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 220 KSEPVPEDNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYE 271
+ E V ++S VK+ +F+E + + VL EF+APWCGHCK + P Y
Sbjct: 1 QQEAVAPEDSAVVKL-ATDSFNEYI-QSHDLVLAEFFAPWCGHCKNMAPEYV 50
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 45.4 bits (107), Expect = 5e-07
Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 237 AKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
F +V+ + K VLV+F + K+ ++ + E
Sbjct: 11 TVTFYKVIPKS-KFVLVKFDTQYPYGEKQ--DEFKRLAEN 47
Score = 40.8 bits (95), Expect = 2e-05
Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 108 AKNFDEVVTNNEKDVLVEFYAPWCGHC 134
F +V+ + K VLV+F +
Sbjct: 11 TVTFYKVIPKS-KFVLVKFDTQYPYGE 36
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 44.0 bits (103), Expect = 1e-06
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 109 KNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELN 168
NF + + +K VLV+F+A WCG C + A+ ADK T A D+ +
Sbjct: 8 ANFQQAI-QGDKPVLVDFWAAWCGPCRMMAPVLE-EFAEAHADKVTVAKLNVDENPETTS 65
Query: 169 EFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTKVV 211
+FG +P+ + + + E LE+ L V+
Sbjct: 66 QFGIMSIPT----LILFKGGEPVKQLIGYQPKEQLEAQLADVL 104
Score = 31.3 bits (70), Expect = 0.032
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 238 KNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVY 270
NF + + +K VLV+F+A WCG C+ + PV
Sbjct: 8 ANFQQAI-QGDKPVLVDFWAAWCGPCRMMAPVL 39
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 44.7 bits (105), Expect = 1e-06
Identities = 5/46 (10%), Positives = 11/46 (23%), Gaps = 1/46 (2%)
Query: 232 VKVAVAKNFDEVVTNNEKD-VLVEFYAPWCGHCKKLTPVYEEVGEK 276
D+ +T VL+ + E+ +
Sbjct: 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLRE 64
Score = 35.8 bits (82), Expect = 0.001
Identities = 12/117 (10%), Positives = 35/117 (29%), Gaps = 9/117 (7%)
Query: 103 VKVAVAKNFDEVVTNNEKD-VLVEFYAPWCGHCTNYWRNRIL-KVAKGFADKFTFAISAK 160
D+ +T VL+ ++ ++ ++ + F D A
Sbjct: 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNP--VMIGELLREFPDYTWQVAIAD 76
Query: 161 DDFQHEL-NEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTKVVAGEVD 216
+ + + FG P+ + + + + L + + +V + +
Sbjct: 77 LEQSEAIGDRFGVFRFPA---TLVFTGGN-YRGVLNGIHPWAELINLMRGLVEPQQE 129
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 124
Score = 43.3 bits (101), Expect = 3e-06
Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 13/126 (10%)
Query: 93 EPVPE-DNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCT-----NYWRNRILKVA 146
PE D V AKN+ V + + + ++ P + A
Sbjct: 2 LDFPEYDGVDRVINVNAKNYKNVFKKY-EVLALLYHEPPEDDKASQRQFEMEELILELAA 60
Query: 147 KGFADK-FTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLES 205
+ DK F + + + G S + + ++ +Y EFS + L
Sbjct: 61 QVLEDKGVGFGLVDSEKDAAVAKKLGLTEEDS---IYVFKEDEVIEY--DGEFSADTLVE 115
Query: 206 FLTKVV 211
FL V+
Sbjct: 116 FLLDVL 121
Score = 41.7 bits (97), Expect = 1e-05
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 8/62 (12%)
Query: 222 EPVPE-DNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGH------CKKLTPVYEEVG 274
PE D V AKN+ V + + + ++ P + + E
Sbjct: 2 LDFPEYDGVDRVINVNAKNYKNVFKKY-EVLALLYHEPPEDDKASQRQFEMEELILELAA 60
Query: 275 EK 276
+
Sbjct: 61 QV 62
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 43.1 bits (101), Expect = 4e-06
Identities = 4/46 (8%), Positives = 12/46 (26%), Gaps = 1/46 (2%)
Query: 232 VKVAVAKNFDEVVTNNEKD-VLVEFYAPWCGHCKKLTPVYEEVGEK 276
+ A D+ + +L+ + E+ +
Sbjct: 13 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLRE 58
Score = 32.3 bits (73), Expect = 0.022
Identities = 7/77 (9%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Query: 103 VKVAVAKNFDEVVTNNEKD-VLVEFYAPWCGHCTNYWRNRIL-KVAKGFAD-KFTFAISA 159
+ A D+ + +L+ ++ ++ ++ + F + A++
Sbjct: 13 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDN--PVMIAELLREFPQFDWQVAVAD 70
Query: 160 KDDFQHELNEFGFDYVP 176
+ + + F P
Sbjct: 71 LEQSEAIGDRFNVRRFP 87
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 42.6 bits (99), Expect = 4e-06
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 238 KNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
F VV + VLV+F+APWCG C+ + PV +E+ +
Sbjct: 9 DTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGE 47
Score = 41.0 bits (95), Expect = 2e-05
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 109 KNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELN 168
F VV + VLV+F+APWCG C + ++A + DK D+ + +
Sbjct: 9 DTFKNVVLESSVPVLVDFWAPWCGPCRIIA-PVVDEIAGEYKDKLKCVKLNTDESPNVAS 67
Query: 169 EFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFL 207
E+G +P+ + + A+ V+ +E +L
Sbjct: 68 EYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 43.2 bits (101), Expect = 5e-06
Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 237 AKNFDE-VVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGE 275
D+ +++ ++ V++ F W C K+ V + E
Sbjct: 10 GWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAE 49
Score = 39.0 bits (90), Expect = 1e-04
Identities = 10/109 (9%), Positives = 36/109 (33%), Gaps = 9/109 (8%)
Query: 108 AKNFDE-VVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHE 166
D+ +++ ++ V++ F W C + +A+ + + +
Sbjct: 10 GWQVDQAILSEEDRVVVIRFGHDWDPTCMKM-DEVLYSIAEKVKNFAVIYLVDITEVPDF 68
Query: 167 LNEFGFDYVPSDKPLVF-----VRAEDGKKYAMKDEFSVENLESFLTKV 210
+ + + F + + G K +++E+ + + +
Sbjct: 69 NKMYELYDPCTV--MFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDII 115
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 42.2 bits (98), Expect = 5e-06
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 232 VKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
V+ ++ E V +E V+V+F+APWCG CK + PV +E+ ++
Sbjct: 1 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 45
Score = 39.9 bits (92), Expect = 3e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 103 VKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYW 138
V+ ++ E V +E V+V+F+APWCG C
Sbjct: 1 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIA 36
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 42.2 bits (98), Expect = 6e-06
Identities = 16/112 (14%), Positives = 31/112 (27%), Gaps = 4/112 (3%)
Query: 97 EDNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFA 156
DN ++V E + + ++ C +C + VA+ A +
Sbjct: 5 LDNIKDLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFIN 63
Query: 157 ISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKD-EFSVENLESFL 207
+ FV DG+ D S + ++ F
Sbjct: 64 SEEPSQLND--LQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFA 113
Score = 40.7 bits (94), Expect = 2e-05
Identities = 8/51 (15%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 226 EDNSGPVKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
DN ++V E + + ++ C +C+K V +
Sbjct: 5 LDNIKDLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAE 54
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 41.7 bits (97), Expect = 8e-06
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 9/113 (7%)
Query: 103 VKVAVAKNFDEVVT---NNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISA 159
+ + +D + K ++V+F A WCG C ++ +A K F
Sbjct: 5 IVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFE-TLSNDYAGKVIFLKVD 63
Query: 160 KDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTKVVA 212
D G +P+ + DG K S + L++ + K A
Sbjct: 64 VDAVAAVAEAAGITAMPT---FHVYK--DGVKADDLVGASQDKLKALVAKHAA 111
Score = 33.6 bits (76), Expect = 0.006
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 232 VKVAVAKNFDEVVT---NNEKDVLVEFYAPWCGHCKKLTPVYEE 272
+ + +D + K ++V+F A WCG CK + P++E
Sbjct: 5 IVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFET 48
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 40.9 bits (95), Expect = 2e-05
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 230 GPVKVAVAKNFDEVVTN-NEKDVLVEFYAPWCGHCKKLTPVY 270
G V F +V +K V+++ + WCG CK + P Y
Sbjct: 6 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKY 47
Score = 40.1 bits (93), Expect = 3e-05
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 101 GPVKVAVAKNFDEVVTN-NEKDVLVEFYAPWCGHCTNYWRNR 141
G V F +V +K V+++ + WCG C
Sbjct: 6 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKY 47
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 40.5 bits (94), Expect = 2e-05
Identities = 7/22 (31%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Query: 251 VLVE-FYAPWCGHCKKLTPVYE 271
V +E F +P C +C V +
Sbjct: 3 VNIEVFTSPTCPYCPMAIEVVD 24
Score = 33.1 bits (75), Expect = 0.006
Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 10/91 (10%)
Query: 122 VLVE-FYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKP 180
V +E F +P C +C + + K F DK + + E+G VP+
Sbjct: 3 VNIEVFTSPTCPYCPMAIEV-VDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPA--- 58
Query: 181 LVFVRAEDGKKYAMKDEFSVENLESFLTKVV 211
+ S E L + +
Sbjct: 59 IAI-----NGVVRFVGAPSREELFEAINDEM 84
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 39.5 bits (91), Expect = 5e-05
Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 10/113 (8%)
Query: 103 VKVAVAKNFDEVVT---NNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISA 159
+ + ++E + ++ V+V+F A WCG C A K +
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFF-----ADLAKKLPNVLFL 63
Query: 160 KDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTKVVA 212
K D + + + +F++ +GK + L+S + K +A
Sbjct: 64 KVDTDELKSVASDWAIQAMPTFMFLK--EGKILDKVVGAKKDELQSTIAKHLA 114
Score = 35.2 bits (80), Expect = 0.002
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 232 VKVAVAKNFDEVVT---NNEKDVLVEFYAPWCGHCKKLTPVYE 271
+ + ++E + ++ V+V+F A WCG C+ + P +
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFA 51
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 39.0 bits (90), Expect = 8e-05
Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 8/110 (7%)
Query: 103 VKVAVAKNFDEVVTNN-EKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKD 161
++ F E + +K V+V+F A WCG C F D
Sbjct: 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPF--FHSLSEKYSNVIFLEVDVD 60
Query: 162 DFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTKVV 211
D Q +E +P+ F + G+K + E LE+ + ++V
Sbjct: 61 DCQDVASECEVKCMPT-----FQFFKKGQKVGEFSGANKEKLEATINELV 105
Score = 32.0 bits (72), Expect = 0.019
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 232 VKVAVAKNFDEVVTNN-EKDVLVEFYAPWCGHCKKLTPVY 270
++ F E + +K V+V+F A WCG CK + P +
Sbjct: 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFF 42
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 38.6 bits (89), Expect = 1e-04
Identities = 14/106 (13%), Positives = 26/106 (24%), Gaps = 8/106 (7%)
Query: 105 VAVAKNFDEVVTN-NEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDF 163
V +F ++ + +V+F CG C + F
Sbjct: 6 VGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSM--SNKYPQAVFLEVDVHQC 63
Query: 164 QHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
Q P+ F R + + LE + +
Sbjct: 64 QGTAATNNISATPT---FQFFR--NKVRIDQYQGADAVGLEEKIKQ 104
Score = 34.7 bits (79), Expect = 0.003
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 234 VAVAKNFDEVVTN-NEKDVLVEFYAPWCGHC 263
V +F ++ + +V+F CG C
Sbjct: 6 VGSDPDFQPELSGAGSRLAVVKFTMRGCGPC 36
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein
C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 38.6 bits (89), Expect = 1e-04
Identities = 7/34 (20%), Positives = 11/34 (32%)
Query: 240 FDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEV 273
+ +N VL F C C + V +
Sbjct: 7 GNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPY 40
Score = 33.6 bits (76), Expect = 0.005
Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 16/104 (15%)
Query: 111 FDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHE--LN 168
+ +N VL F C C + +V + + D+F ++
Sbjct: 7 GNLSASNRALPVLTLFTKAPCPLC-----DEAKEVLQPYKDRFILQEVDITLPENSTWYE 61
Query: 169 EFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTKVVA 212
+ FD P+ + + + + LE L K+
Sbjct: 62 RYKFDI-----PVFHLNGQFLMMHR----VNTSKLEKQLRKLSG 96
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 40.0 bits (93), Expect = 1e-04
Identities = 11/93 (11%), Positives = 24/93 (25%), Gaps = 2/93 (2%)
Query: 185 RAEDGKKYAMKDEFSVENLESFLTKVVAGEVDPYIKSEPVPEDNSGPVKVAVAKNFDEVV 244
+ + + E L K + + ++ + F E +
Sbjct: 55 MSRKMSIQEYELIHQDKEDEGCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETI 114
Query: 245 TNNEKD--VLVEFYAPWCGHCKKLTPVYEEVGE 275
+K ++V Y C L E +
Sbjct: 115 EKEQKVTTIVVNIYEDGVRGCDALNSSLECLAA 147
Score = 39.6 bits (92), Expect = 2e-04
Identities = 22/165 (13%), Positives = 48/165 (29%), Gaps = 18/165 (10%)
Query: 56 RAEDGKKYAMKDEFSVENLESFLTKVVAGEVDPYIKSEPVPEDNSGPVKVAVAKNFDEVV 115
+ + + E L K + + ++ + F E +
Sbjct: 55 MSRKMSIQEYELIHQDKEDEGCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETI 114
Query: 116 TNNEKD--VLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFD 173
+K ++V Y C N L+ F + + F D
Sbjct: 115 EKEQKVTTIVVNIYEDGVRGCDAL--NSSLECLAAEYPMVKFCKIRASNTG-AGDRFSSD 171
Query: 174 YVPSDKPLVFVRAEDGKKYA--------MKDEFSVENLESFLTKV 210
+P+ L+ + G+ + ++F ++ESFL +
Sbjct: 172 VLPT---LLVYK--GGELISNFISVAEQFAEDFFAADVESFLNEY 211
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 38.8 bits (89), Expect = 1e-04
Identities = 13/66 (19%), Positives = 20/66 (30%)
Query: 109 KNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELN 168
+ + V K VL+ +A WC + A+G + L
Sbjct: 10 QFYQADVLTQGKPVLLNVWATWCPTSRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLK 69
Query: 169 EFGFDY 174
E G Y
Sbjct: 70 ELGNPY 75
Score = 33.8 bits (76), Expect = 0.008
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 238 KNFDEVVTNNEKDVLVEFYAPWCGHC 263
+ + V K VL+ +A WC
Sbjct: 10 QFYQADVLTQGKPVLLNVWATWCPTS 35
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 37.5 bits (86), Expect = 2e-04
Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 8/101 (7%)
Query: 109 KNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELN 168
FD +++ N + V+V+F+A WCG C F D+
Sbjct: 9 AEFDSIISQN-ELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVD--VDEVSEVTE 65
Query: 169 EFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
+ +P+ F ++G + L+ + K
Sbjct: 66 KENITSMPT-----FKVYKNGSSVDTLLGANDSALKQLIEK 101
Score = 30.6 bits (68), Expect = 0.062
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 238 KNFDEVVTNNEKDVLVEFYAPWCGHC 263
FD +++ N + V+V+F+A WCG C
Sbjct: 9 AEFDSIISQN-ELVIVDFFAEWCGPC 33
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 37.2 bits (85), Expect = 3e-04
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 236 VAKNFDEVVTNNEKDVLVE-FYAPWCGHCKKLTPVYEE 272
+ + + N ++DV + F P C +C + +
Sbjct: 2 LMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHK 39
Score = 30.3 bits (67), Expect = 0.085
Identities = 12/110 (10%), Positives = 36/110 (32%), Gaps = 8/110 (7%)
Query: 107 VAKNFDEVVTNNEKDVLVE-FYAPWCGHC---TNYWRNRILKVAKGFADKFTFAISAKDD 162
+ + + N ++DV + F P C +C ++ K K + +
Sbjct: 2 LMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE 61
Query: 163 FQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTKVVA 212
+ +++ VP + ++ + + + + L ++
Sbjct: 62 YPEWADQYNVMAVPK----IVIQVNGEDRVEFEGAYPEKMFLEKLLSALS 107
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 36.7 bits (84), Expect = 6e-04
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 109 KNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELN 168
++F++ + K ++V+F A WC C I TF D+ +
Sbjct: 17 EHFEKGKGSQ-KLIVVDFTASWCPPC--KMIAPIFAELAKKFPNVTFLKVDVDELKAVAE 73
Query: 169 EFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
E+ + +P+ +F++ DGK + L + + K
Sbjct: 74 EWNVEAMPT---FIFLK--DGKLVDKTVGADKDGLPTLVAK 109
Score = 32.5 bits (73), Expect = 0.016
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 238 KNFDEVVTNNEKDVLVEFYAPWCGHCKKLTPVYE 271
++F++ + K ++V+F A WC CK + P++
Sbjct: 17 EHFEKGKGSQ-KLIVVDFTASWCPPCKMIAPIFA 49
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 36.0 bits (82), Expect = 0.001
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 103 VKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCTNYWRNR 141
V V + F ++ + + + F A WCG C R
Sbjct: 11 VDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPM 48
Score = 34.4 bits (78), Expect = 0.003
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 232 VKVAVAKNFDEVVTNNEKDVLVEFYAPWCGHCKK 265
V V + F ++ + + + F A WCG CK
Sbjct: 11 VDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKT 43
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 34.7 bits (79), Expect = 0.002
Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Query: 107 VAKNFDEVVTNNEKDV-LVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQH 165
A++ E + + + D +Y+ C +C + + L + FQ+
Sbjct: 2 EAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLN--PRIKHTAIDGGTFQN 59
Query: 166 ELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLES 205
E+ E VP+ VFV ++ + M V +++
Sbjct: 60 EITERNVMGVPA----VFVNGKEFGQGRMTLTEIVAKVDT 95
Score = 32.4 bits (73), Expect = 0.012
Identities = 6/42 (14%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 236 VAKNFDEVVTNNEKDV-LVEFYAPWCGHCKKLTPVYEEVGEK 276
A++ E + + + D +Y+ C +C + +
Sbjct: 2 EAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVL 43
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 34.1 bits (77), Expect = 0.007
Identities = 8/59 (13%), Positives = 13/59 (22%)
Query: 118 NEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVP 176
EK L+ F++ C C K A+ +
Sbjct: 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAA 86
Score = 32.6 bits (73), Expect = 0.020
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 247 NEKDVLVEFYAPWCGHCKK 265
EK L+ F++ C CK+
Sbjct: 28 GEKPTLIHFWSISCHLCKE 46
>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 111
Score = 33.0 bits (74), Expect = 0.011
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 7/108 (6%)
Query: 103 VKVAVAKNFDEVVTNNE-KDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKD 161
+V + D +T K V+++F+A WCG C + + + K
Sbjct: 8 YQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLV----ELSTQFADNVVVLKV 63
Query: 162 DFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
D + + S VF++ +G K + + LE +
Sbjct: 64 DVDECEDIAMEYNISSMPTFVFLK--NGVKVEEFAGANAKRLEDVIKA 109
Score = 29.5 bits (65), Expect = 0.17
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 232 VKVAVAKNFDEVVTNNE-KDVLVEFYAPWCGHCKKLTPVYEEV 273
+V + D +T K V+++F+A WCG CK ++P E+
Sbjct: 8 YQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVEL 50
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 32.5 bits (73), Expect = 0.015
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 8/51 (15%)
Query: 231 PVKVAVAKNFDEVVTNNE-KDVLVEFYA-------PWCGHCKKLTPVYEEV 273
V V+ + F V + K + F WC C + PV E
Sbjct: 3 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREG 53
Score = 31.7 bits (71), Expect = 0.035
Identities = 15/119 (12%), Positives = 32/119 (26%), Gaps = 15/119 (12%)
Query: 102 PVKVAVAKNFDEVVTNNE-KDVLVEFYA-------PWCGHCTNYWRNRILKVAKGFADKF 153
V V+ + F V + K + F WC C + + K ++
Sbjct: 3 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAE-PVVREGLKHISEGC 61
Query: 154 TFAISAKDDFQHELNEFGFDY----VPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLT 208
F + + + V + L+ +K + +E +
Sbjct: 62 VFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYG--TPQKLVESECLQANLVEMLFS 118
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 32.1 bits (72), Expect = 0.027
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 242 EVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEKA 277
+ + ++V + WCG CK L P + E E +
Sbjct: 19 KEAAASGLPLMVIIHKSWCGACKALKPKFAESTEIS 54
Score = 27.5 bits (60), Expect = 0.94
Identities = 10/81 (12%), Positives = 24/81 (29%), Gaps = 2/81 (2%)
Query: 113 EVVTNNEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGF 172
+ + ++V + WCG C + ++ + + + E + F
Sbjct: 19 KEAAASGLPLMVIIHKSWCGACKALK--PKFAESTEISELSHNFVMVNLEDEEEPKDEDF 76
Query: 173 DYVPSDKPLVFVRAEDGKKYA 193
P + GK +
Sbjct: 77 SPDGGYIPRILFLDPSGKVHP 97
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 85
Score = 30.7 bits (68), Expect = 0.039
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 249 KDVLVEFYAPWCGHCKKL 266
K + F +P C HC
Sbjct: 3 KVKIELFTSPMCPHCPAA 20
Score = 29.9 bits (66), Expect = 0.071
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 120 KDVLVEFYAPWCGHCTNYWRNR 141
K + F +P C HC R
Sbjct: 3 KVKIELFTSPMCPHCPAAKRVV 24
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 31.9 bits (71), Expect = 0.043
Identities = 18/133 (13%), Positives = 38/133 (28%), Gaps = 4/133 (3%)
Query: 91 KSEPVPEDNSGPVKVAVAKNFDEVVTNNEKDV-LVEFYAPWCGHCTNYWRNRILKVAKGF 149
+ V + E + E+ L+ WC C L A+
Sbjct: 25 EQGAVARFRQKLESNGLPSALTERLQRIERRYRLLVAGEMWCPDCQIN--LAALDFAQRL 82
Query: 150 ADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVENLESFLTK 209
AI +K + +L + + ++ + E+ E L+
Sbjct: 83 QPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLD-EEFNLLGRFVERPQAVLDGGPQA 141
Query: 210 VVAGEVDPYIKSE 222
+ A + Y++
Sbjct: 142 LAAYKAGDYLEHA 154
Score = 28.0 bits (61), Expect = 0.81
Identities = 7/54 (12%), Positives = 14/54 (25%), Gaps = 1/54 (1%)
Query: 220 KSEPVPEDNSGPVKVAVAKNFDEVVTNNEKDV-LVEFYAPWCGHCKKLTPVYEE 272
+ V + E + E+ L+ WC C+ +
Sbjct: 25 EQGAVARFRQKLESNGLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDF 78
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 156
Score = 31.7 bits (71), Expect = 0.053
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 247 NEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
EK V+ F CG+C KL +
Sbjct: 25 QEKHVITVFTDITCGYCHKLHEQMADYNAL 54
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC,
C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Length = 150
Score = 30.5 bits (68), Expect = 0.11
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 247 NEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
NEK V+ F C +C L +E +
Sbjct: 25 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL 54
Score = 24.8 bits (53), Expect = 9.8
Identities = 8/38 (21%), Positives = 13/38 (34%)
Query: 118 NEKDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTF 155
NEK V+ F C +C + G ++
Sbjct: 25 NEKHVVTVFMDITCHYCHLLHQQLKEYNDLGITVRYLA 62
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 29.1 bits (64), Expect = 0.29
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 248 EKDVLVEFYAPWCGHCKKLTPVY 270
+K L++F+A WC C
Sbjct: 23 DKPTLIKFWASWCPLCLSELGQT 45
Score = 28.7 bits (63), Expect = 0.49
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 119 EKDVLVEFYAPWCGHCTNYW 138
+K L++F+A WC C +
Sbjct: 23 DKPTLIKFWASWCPLCLSEL 42
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 195
Score = 29.2 bits (65), Expect = 0.37
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 249 KDVLVEFYAPWCGHCKKLTPVYEEVGE 275
++EF++ +C HC + V
Sbjct: 114 APQVLEFFSFFCPHCYQFEEVLHISDN 140
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 28.4 bits (62), Expect = 0.70
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 247 NEKDVLVEFYAPWCGHCKKLTPVYEEVGE 275
++EF++ +C HC + V
Sbjct: 17 AGAPQVLEFFSFFCPHCYQFEEVLHISDN 45
>d1a8ya2 c.47.1.3 (A:127-228) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 102
Score = 27.5 bits (61), Expect = 0.81
Identities = 7/67 (10%), Positives = 20/67 (29%), Gaps = 6/67 (8%)
Query: 14 LKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVEN 73
+ A+ F F + +L + ++ + + S E
Sbjct: 38 KEAAEEFHPYIPFFATFDSKVAKKLT------LKLNEIDFYEAFMEEPVTIPDKPNSEEE 91
Query: 74 LESFLTK 80
+ +F+ +
Sbjct: 92 IVNFVEE 98
Score = 27.5 bits (61), Expect = 0.81
Identities = 7/67 (10%), Positives = 20/67 (29%), Gaps = 6/67 (8%)
Query: 143 LKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMKDEFSVEN 202
+ A+ F F + +L + ++ + + S E
Sbjct: 38 KEAAEEFHPYIPFFATFDSKVAKKLT------LKLNEIDFYEAFMEEPVTIPDKPNSEEE 91
Query: 203 LESFLTK 209
+ +F+ +
Sbjct: 92 IVNFVEE 98
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Vibrio cholerae [TaxId: 666]}
Length = 181
Score = 28.1 bits (61), Expect = 0.86
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 247 NEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
+ V+ EF++ +C HC P+ ++ ++
Sbjct: 17 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQ 46
Score = 25.4 bits (54), Expect = 7.3
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 118 NEKDVLVEFYAPWCGHCTNYWRNR 141
+ V+ EF++ +C HC +
Sbjct: 17 SSSPVVSEFFSFYCPHCNTFEPII 40
>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein
DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli
[TaxId: 562]}
Length = 117
Score = 27.2 bits (59), Expect = 1.0
Identities = 11/111 (9%), Positives = 31/111 (27%), Gaps = 7/111 (6%)
Query: 103 VKVAVAKNFDEVVTNNE-KDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKD 161
++ ++ + + K V+++ YA WC C + + + + +
Sbjct: 5 TQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKY-TFSDPQVQKALADTVLLQAN 63
Query: 162 DF--QHELNEFGFDYVPSDKPLVFVRAEDGK---KYAMKDEFSVENLESFL 207
+ P + G+ + + E + L
Sbjct: 64 VTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHL 114
Score = 26.9 bits (58), Expect = 1.3
Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 232 VKVAVAKNFDEVVTNNE-KDVLVEFYAPWCGHCKKLTPVYEEVGEKA 277
++ ++ + + K V+++ YA WC CK+ +
Sbjct: 5 TQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQ 51
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 27.6 bits (60), Expect = 1.6
Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 6/92 (6%)
Query: 4 TGTNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKY 63
+G++ W K F DD L+ G Y D D
Sbjct: 162 SGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYECYDLLSTM----DISDC 217
Query: 64 AMKDEFSVENLESFLTKV--VAGEVDPYIKSE 93
+ + + L FLT+ P +++E
Sbjct: 218 FIDGNENGDLLWDFLTETCNFNATAPPDLRAE 249
Score = 26.5 bits (57), Expect = 3.3
Identities = 16/89 (17%), Positives = 25/89 (28%), Gaps = 6/89 (6%)
Query: 136 NYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPLVFVRAEDGKKYAMK 195
+ W K F DD L+ G Y D D +
Sbjct: 165 SGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYECYDLLSTM----DISDCFID 220
Query: 196 DEFSVENLESFLTKV--VAGEVDPYIKSE 222
+ + L FLT+ P +++E
Sbjct: 221 GNENGDLLWDFLTETCNFNATAPPDLRAE 249
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 26.3 bits (57), Expect = 2.6
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 249 KDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
K V F A WC + TP + +
Sbjct: 29 KTVFFYFSASWCPPSRAFTPQLIDFYKA 56
Score = 25.2 bits (54), Expect = 6.9
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Query: 120 KDVLVEFYAPWCGHCTNY-WRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSD 178
K V F A WC + + A F + + D+ + ++
Sbjct: 29 KTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLA 88
Query: 179 KPL 181
P
Sbjct: 89 LPF 91
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase
{Pseudomonas cepacia [TaxId: 292]}
Length = 431
Score = 27.0 bits (58), Expect = 3.0
Identities = 7/43 (16%), Positives = 15/43 (34%), Gaps = 7/43 (16%)
Query: 28 ISAKDDFQHELNEFGFDYVPSDKPLVFVRAE-------DGKKY 63
++ F Y + +P++ RA+ DG+
Sbjct: 1 LNDDATFWRNARHHLVRYGGTFEPMIIERAKGSFVYDADGRAI 43
Score = 27.0 bits (58), Expect = 3.0
Identities = 7/43 (16%), Positives = 15/43 (34%), Gaps = 7/43 (16%)
Query: 157 ISAKDDFQHELNEFGFDYVPSDKPLVFVRAE-------DGKKY 192
++ F Y + +P++ RA+ DG+
Sbjct: 1 LNDDATFWRNARHHLVRYGGTFEPMIIERAKGSFVYDADGRAI 43
>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770
{Enterococcus faecalis [TaxId: 1351]}
Length = 172
Score = 25.7 bits (55), Expect = 5.8
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 247 NEKDVLVEFYAPWCGHCKKLTPVYE 271
N ++EF C +C+K E
Sbjct: 23 NAPVKMIEFINVRCPYCRKWFEESE 47
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 25.1 bits (54), Expect = 6.9
Identities = 5/45 (11%), Positives = 13/45 (28%), Gaps = 3/45 (6%)
Query: 231 PVKVAVAKNFDEVVT---NNEKDVLVEFYAPWCGHCKKLTPVYEE 272
P+ + +F+ K +++ C+ L
Sbjct: 22 PIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWS 66
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 25.3 bits (54), Expect = 8.0
Identities = 21/155 (13%), Positives = 39/155 (25%), Gaps = 9/155 (5%)
Query: 122 VLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHELNEFGFDYVPSDKPL 181
+VE Y G C N + A A + ++ E D + + K
Sbjct: 33 AIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDG 92
Query: 182 VFVRAEDGKKYAMKDEFSVENLESFLTKVVAGEVDPYIKSEPVPEDNSGPVKVAVAKNFD 241
V R G K V+ G+ +G A +
Sbjct: 93 VVSRLTGGLAGMAKSRK---------VDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGE 143
Query: 242 EVVTNNEKDVLVEFYAPWCGHCKKLTPVYEEVGEK 276
+ + + ++ G V ++
Sbjct: 144 KKIVAFKNCIIAAGSRAPNGKLISAEKAGVAVTDR 178
>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain
{Neurospora crassa [TaxId: 5141]}
Length = 184
Score = 24.9 bits (53), Expect = 9.5
Identities = 10/48 (20%), Positives = 18/48 (37%)
Query: 120 KDVLVEFYAPWCGHCTNYWRNRILKVAKGFADKFTFAISAKDDFQHEL 167
+ + +I K A GF +F +AI+ ++ EL
Sbjct: 128 HESYGVVTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIAQHRNWDREL 175
Score = 24.9 bits (53), Expect = 9.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 10 RNRILKVAKGFADKFTFAISAKDDFQHEL 38
+I K A GF +F +AI+ ++ EL
Sbjct: 147 AVKIAKGAAGFLGEFFYAIAQHRNWDREL 175
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.135 0.407
Gapped
Lambda K H
0.267 0.0713 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,099,902
Number of extensions: 53373
Number of successful extensions: 269
Number of sequences better than 10.0: 1
Number of HSP's gapped: 250
Number of HSP's successfully gapped: 113
Length of query: 277
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 193
Effective length of database: 1,254,276
Effective search space: 242075268
Effective search space used: 242075268
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (23.8 bits)