RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9104
(128 letters)
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 86.3 bits (213), Expect = 1e-23
Identities = 13/93 (13%), Positives = 32/93 (34%), Gaps = 8/93 (8%)
Query: 33 SSVLDLGDSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVD 92
+ +DL + FE + + ++V F K + + A + V
Sbjct: 2 TGCVDLDELSFEKTVERFPYSVVKFDIASPYGEK--HEAFTAFSKSAHKATKDLLIATVG 59
Query: 93 CTEAG----KETCNKHG--VSGYPTLKIFRNGQ 119
+ G K +++ +P++ +F+
Sbjct: 60 VKDYGELENKALGDRYKVDDKNFPSIFLFKGNA 92
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 70.4 bits (172), Expect = 2e-17
Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 9/97 (9%)
Query: 35 VLDLGDSDFEAVINQHETALVMFYAPWCGHCK-----KLKPEYEKAATDVKGADPPISFV 89
L L F VI + + LV F + K +L + + +
Sbjct: 6 ALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVA---EVGIS 62
Query: 90 KVDCTE-AGKETCNKHGVSGYPTLKIFRNGQVSKAKK 125
K YP +FR+G
Sbjct: 63 DYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVP 99
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 69.1 bits (168), Expect = 6e-17
Identities = 45/95 (47%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 31 DESSVLDLGDSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVK 90
+E VL L S+F + H+ LV FYAPWCGHCK L PEY KAA +K I K
Sbjct: 5 EEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAK 64
Query: 91 VDCTEAGKETCNKHGVSGYPTLKIFRNGQVSKAKK 125
VD TE + ++GV GYPT+K FRNG + K+
Sbjct: 65 VDATEE-SDLAQQYGVRGYPTIKFFRNGDTASPKE 98
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 124
Score = 64.5 bits (156), Expect = 4e-15
Identities = 15/96 (15%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 31 DESSVLDLGDSDFEAVINQHETALVMFYAPWCGH------CKKLKPEYEKAATDVKGADP 84
V+++ +++ V ++E ++++ P + + E AA ++ D
Sbjct: 9 GVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLE--DK 66
Query: 85 PISFVKVDCTEAGKETCNKHGVSGYPTLKIFRNGQV 120
+ F VD + K G++ ++ +F+ +V
Sbjct: 67 GVGFGLVDSEK-DAAVAKKLGLTEEDSIYVFKEDEV 101
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 61.0 bits (147), Expect = 5e-14
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 34 SVLDLGDSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDC 93
+ + L D++F+ I + LV F+A WCG C+ + P E+ A ++ K++
Sbjct: 1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD---KVTVAKLNV 57
Query: 94 TEAGKETCNKHGVSGYPTLKIFRNGQV 120
E ET ++ G+ PTL +F+ G+
Sbjct: 58 DE-NPETTSQFGIMSIPTLILFKGGEP 83
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 59.9 bits (144), Expect = 4e-13
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 31 DESSVLDLGDSDF-EAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFV 89
+SSV L + E V + + LV++YAPWCGHCK+L P Y++ A A +
Sbjct: 10 QDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIA 69
Query: 90 KVDCTEAGKETCNKHGVSGYPTLKIFRNGQVSKAKK 125
K+D TE + GYPT+ ++ G+ S++
Sbjct: 70 KLDHTE---NDVRGVVIEGYPTIVLYPGGKKSESVV 102
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 119
Score = 59.2 bits (142), Expect = 4e-13
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 28 VSCDESSVLDLGDSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPIS 87
V+ ++S+V+ L F I H+ L F+APWCGHCK + PEY KAA +
Sbjct: 5 VAPEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETL---VEKNI 61
Query: 88 FVKVDCTEAGKETCNKHGVSGYPTLKIFRNGQVSKAKK 125
+ ++ C +H + G+P+LKIF+N V+ +
Sbjct: 62 TLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSID 99
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 58.6 bits (141), Expect = 6e-13
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 35 VLDLGDSDFEA-VINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDC 93
++ L D F+ V+ LV F+A WCG CK + P ++ A + ++ K++
Sbjct: 4 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY---QGKLTVAKLNI 60
Query: 94 TEAGKETCNKHGVSGYPTLKIFRNGQV 120
+ T K+G+ G PTL +F+NG+V
Sbjct: 61 DQ-NPGTAPKYGIRGIPTLLLFKNGEV 86
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 58.3 bits (140), Expect = 6e-13
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 33 SSVLDLGDSDFEA-VINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKV 91
V+ + D++FE+ V+ + LV F+A WCG C+ + P AA +
Sbjct: 2 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKL--- 58
Query: 92 DCTEAGKETCNKHGVSGYPTLKIFRNGQV 120
+ T K+ V G P L++ + Q+
Sbjct: 59 -EIDPNPTTVKKYKVEGVPALRLVKGEQI 86
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 57.2 bits (137), Expect = 2e-12
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 32 ESSVLDLGDSDFEA-VINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVK 90
E V + ++ V++ + L+ FYAPWCGHCK L P+YE+ A
Sbjct: 1 EGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGA--LYAKSEFKDRV 58
Query: 91 VDCTEAGKETCNKHGVSGYPTLKIFRNGQVSK 122
V + G+PT+K++ G +
Sbjct: 59 VIAKVDATANDVPDEIQGFPTIKLYPAGAKGQ 90
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 56.9 bits (137), Expect = 3e-12
Identities = 8/85 (9%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 38 LGDSDFEAVINQHETALVM--FYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTE 95
+ S + I + +++ + + D D +
Sbjct: 16 VEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFD--WQVAVADLEQ 73
Query: 96 AGKETCNKHGVSGYPTLKIFRNGQV 120
+ + ++ V +P +F +G++
Sbjct: 74 S-EAIGDRFNVRRFPATLVFTDGKL 97
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 55.9 bits (134), Expect = 3e-12
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Query: 54 LVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTLK 113
+ +F +P C +C ++A + V+ +E ++G+ P +
Sbjct: 5 IEVFTSPTCPYCPMAIEVVDEAKKE----FGDKIDVEKIDIMVDREKAIEYGLMAVPAIA 60
Query: 114 IFRNGQVSKAKKTE 127
I + A E
Sbjct: 61 INGVVRFVGAPSRE 74
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 55.8 bits (134), Expect = 9e-12
Identities = 8/86 (9%), Positives = 25/86 (29%), Gaps = 5/86 (5%)
Query: 37 DLGDSDFEAVINQHETALVM--FYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCT 94
+ +S + + Q +V+ + + ++ ++
Sbjct: 21 PVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLE-- 78
Query: 95 EAGKETCNKHGVSGYPTLKIFRNGQV 120
+ ++ GV +P +F G
Sbjct: 79 -QSEAIGDRFGVFRFPATLVFTGGNY 103
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 55.2 bits (132), Expect = 1e-11
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 33 SSVLDLGDSDFEAVINQHETALVM--FYAPWCGHCKKLKPEYEKAATDVKGADPPISFVK 90
V ++ F ++ V+ + WCG CK + P+YEK A + + F+K
Sbjct: 6 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEE----YLDVIFLK 61
Query: 91 VDCTEAGKETCNKHGVSGYPTLKIFRNGQV 120
+DC + K + G+ PT KI + V
Sbjct: 62 LDCNQENKTLAKELGIRVVPTFKILKENSV 91
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 53.8 bits (128), Expect = 5e-11
Identities = 12/80 (15%), Positives = 28/80 (35%)
Query: 41 SDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKET 100
+ +++ ETA C +C+K + K I+ + +
Sbjct: 17 VRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAF 76
Query: 101 CNKHGVSGYPTLKIFRNGQV 120
+++G+ P +GQ+
Sbjct: 77 RSRYGIPTVPGFVHITDGQI 96
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 52.6 bits (125), Expect = 1e-10
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Query: 37 DLGDSDFEAVINQHE-TALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTE 95
+L D +A+ N + +++F P C +C K A + A +
Sbjct: 1 NLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI 60
Query: 96 AGKETCNKHGVSGYPTLKIFRNGQV 120
E +++ V P + I NG+
Sbjct: 61 EYPEWADQYNVMAVPKIVIQVNGED 85
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 50.5 bits (120), Expect = 8e-10
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 40 DSDFEAVINQHETALVM--FYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAG 97
D DF+ ++ + L + F CG C ++ P + P +
Sbjct: 9 DPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSS-----MSNKYPQAVFLEVDVHQC 63
Query: 98 KETCNKHGVSGYPTLKIFRNGQV 120
+ T + +S PT + FRN
Sbjct: 64 QGTAATNNISATPTFQFFRNKVR 86
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 49.8 bits (118), Expect = 1e-09
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 40 DSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKE 99
++F+++I+Q+E +V F+A WCG CK++ P YE+ + E
Sbjct: 8 QAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEE-----CSKTYTKMVFIKVDVDEVSE 62
Query: 100 TCNKHGVSGYPTLKIFRNGQV 120
K ++ PT K+++NG
Sbjct: 63 VTEKENITSMPTFKVYKNGSS 83
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 50.2 bits (119), Expect = 1e-09
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 36 LDLGDSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTE 95
+D FE + +V F A WC CK + P + + A +
Sbjct: 12 VDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN-----VTFLKVDVD 66
Query: 96 AGKETCNKHGVSGYPTLKIFRNGQV 120
K + V PT ++G++
Sbjct: 67 ELKAVAEEWNVEAMPTFIFLKDGKL 91
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 85
Score = 48.4 bits (114), Expect = 3e-09
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 51 ETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKETCNKHGVSGYP 110
+ + +F +P C HC K E+ A + P V+ + ++G+ P
Sbjct: 3 KVKIELFTSPMCPHCPAAKRVVEEVANE----MPDAVEVEYINVMENPQKAMEYGIMAVP 58
Query: 111 TLKIFRNGQVSKAKKTE 127
T+ I + + A E
Sbjct: 59 TIVINGDVEFIGAPTKE 75
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 49.1 bits (116), Expect = 3e-09
Identities = 16/97 (16%), Positives = 27/97 (27%), Gaps = 18/97 (18%)
Query: 38 LGDSDFEAVINQHETALVMFY---------APWCGHCKKLKPEYEKAATDVKGADPPISF 88
G +F + QH + Y WC C + +P + + F
Sbjct: 7 SGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVF 63
Query: 89 VKVDCTE------AGKETCNKHGVSGYPTLKIFRNGQ 119
+ E + V+ PTL + Q
Sbjct: 64 IYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTPQ 100
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 48.6 bits (115), Expect = 4e-09
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 40 DSDFEAVINQHETALVM--FYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAG 97
+ F+ ++ LV+ F A WCG CK +KP + + + F++VD +
Sbjct: 8 KTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEK----YSNVIFLEVDVDDC- 62
Query: 98 KETCNKHGVSGYPTLKIFRNGQV 120
++ ++ V PT + F+ GQ
Sbjct: 63 QDVASECEVKCMPTFQFFKKGQK 85
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 48.3 bits (114), Expect = 6e-09
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 32 ESSVLDLGDSD-FEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVK 90
SV+D+ + F ++++ + F A WCG CK ++ EK + P
Sbjct: 7 YPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEK-----IAYEFPTVKFA 61
Query: 91 VDCTEAGKETCNKHGVSGYPTLKIFRNGQV 120
+ E +K V PT I R+G++
Sbjct: 62 KVDADNNSEIVSKCRVLQLPTFIIARSGKM 91
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 47.1 bits (111), Expect = 1e-08
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 40 DSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKE 99
D+ +H+ +V F A WCG CK + P +E + D +A
Sbjct: 14 DAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYA----GKVIFLKVDVDAVAA 69
Query: 100 TCNKHGVSGYPTLKIFRNGQV 120
G++ PT ++++G
Sbjct: 70 VAEAAGITAMPTFHVYKDGVK 90
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 47.1 bits (111), Expect = 3e-08
Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 6/80 (7%)
Query: 42 DFEAVINQHETALVM--FYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKE 99
+ I E +V+ F W C K+ A VK +
Sbjct: 12 QVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLV----DITEVPD 67
Query: 100 TCNKHGVSGYPTLKIFRNGQ 119
+ + T+ F +
Sbjct: 68 FNKMYELYDPCTVMFFFRNK 87
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 46.0 bits (108), Expect = 5e-08
Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Query: 40 DSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKE 99
+ + +V F A WCG C+ + P + A + +
Sbjct: 18 NEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKS----- 72
Query: 100 TCNKHGVSGYPTLKIFRNGQV 120
+ + PT + G++
Sbjct: 73 VASDWAIQAMPTFMFLKEGKI 93
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 45.3 bits (106), Expect = 7e-08
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 34 SVLDLGDSDFEA-VINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVD 92
+ D F+ V+ LV F+APWCG C+ + P ++ A + + VK++
Sbjct: 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEY---KDKLKCVKLN 58
Query: 93 CTEAGKETCNKHGVSGYPTLKIFRNGQV 120
+ +++G+ PT+ +F+ G+
Sbjct: 59 T-DESPNVASEYGIRSIPTIMVFKGGKK 85
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 46.6 bits (110), Expect = 9e-08
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 10/91 (10%)
Query: 34 SVLDLGDSD--FEAVINQHETALVM--FYAPWCGHCKKLKPEYEKAATDVKGADPPISFV 89
V +L + E + + + ++ Y C L E A + F
Sbjct: 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVK----FC 155
Query: 90 KVDCTEAGKETCNKHGVSGYPTLKIFRNGQV 120
K+ + ++ PTL +++ G++
Sbjct: 156 KIRASNT--GAGDRFSSDVLPTLLVYKGGEL 184
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 44.5 bits (104), Expect = 1e-07
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 35 VLDLGDSDFEAVINQHETA-LVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDC 93
V D+ DS ++ + + E +V F+APWCG CK + P ++ A + V
Sbjct: 1 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE----YSGKIAVYKLN 56
Query: 94 TEAGKETCNKHGVSGYPTLKIFRNGQV 120
T+ ++ + PT+ F+NG+
Sbjct: 57 TDEAPGIATQYNIRSIPTVLFFKNGER 83
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 43.6 bits (102), Expect = 2e-07
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
Query: 44 EAVINQ-----HETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGK 98
++++ Q + +Y+ C +C + A +P I +D +
Sbjct: 4 QSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVL----NPRIKHTAIDGGTF-Q 58
Query: 99 ETCNKHGVSGYPTLKIFRNGQV 120
+ V G P +F NG+
Sbjct: 59 NEITERNVMGVPA--VFVNGKE 78
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 40.2 bits (93), Expect = 8e-06
Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 40 DSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKE 99
+ + +V+ + WCG CK LKP++ ++ ++ V ++ E K+
Sbjct: 15 EDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAEST-EISELSHNFVMVNLEDEEEPKD 73
Query: 100 TCNKHGVSGYPTLKIFR-NGQV 120
P + +G+V
Sbjct: 74 EDFSPDGGYIPRILFLDPSGKV 95
>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 111
Score = 38.7 bits (89), Expect = 2e-05
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 40 DSDFEAVINQHE--TALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAG 97
+D + + + ++ F+A WCG CK + P+ + +T + +KVD E
Sbjct: 13 KADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFA---DNVVVLKVDVDEC- 68
Query: 98 KETCNKHGVSGYPTLKIFRNGQV 120
++ ++ +S PT +NG
Sbjct: 69 EDIAMEYNISSMPTFVFLKNGVK 91
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing
protein C330018D20Rik {Mouse (Mus musculus) [TaxId:
10090]}
Length = 100
Score = 35.5 bits (81), Expect = 3e-04
Identities = 8/43 (18%), Positives = 13/43 (30%), Gaps = 3/43 (6%)
Query: 39 GDSDFEAVINQHETA---LVMFYAPWCGHCKKLKPEYEKAATD 78
G S ++ A L +F C C + K +
Sbjct: 1 GSSGSSGNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYKDR 43
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 31.1 bits (69), Expect = 0.023
Identities = 10/91 (10%), Positives = 25/91 (27%), Gaps = 24/91 (26%)
Query: 54 LVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVD--------------------- 92
L+ F++ C CK+ P+ + + ++
Sbjct: 33 LIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQ 92
Query: 93 --CTEAGKETCNKHGVSGYPTLKIF-RNGQV 120
++ + P +F + GQ+
Sbjct: 93 PIFVDSDHALTDAFENEYVPAYYVFDKTGQL 123
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 30.4 bits (67), Expect = 0.033
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 36 LDLGDSDFEA-VINQHETALVMFYAPWCGHC 65
LD ++A V+ Q + L+ +A WC
Sbjct: 5 LDNPGQFYQADVLTQGKPVLLNVWATWCPTS 35
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 30.3 bits (67), Expect = 0.036
Identities = 7/65 (10%), Positives = 17/65 (26%), Gaps = 2/65 (3%)
Query: 54 LVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTLK 113
L++ WC C+ + A + ++ + E P +
Sbjct: 58 LLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVL 115
Query: 114 IFRNG 118
+
Sbjct: 116 VLDEE 120
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin
{Corynebacterium ammoniagenes [TaxId: 1697]}
Length = 74
Score = 28.1 bits (62), Expect = 0.10
Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Query: 54 LVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTLK 113
+ ++ P C C K ++A V + + ++ G P
Sbjct: 3 ITLYTKPACVQCTATKKALDRAGLAYN-------TVDISLDDEARDYVMALGYVQAPV-- 53
Query: 114 IFRNGQV 120
+ +G+
Sbjct: 54 VEVDGEH 60
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 156
Score = 29.0 bits (64), Expect = 0.11
Identities = 17/104 (16%), Positives = 25/104 (24%), Gaps = 38/104 (36%)
Query: 54 LVMFYAPWCGHCKKLKPEYE-------------------------------------KAA 76
+ +F CG+C KL + KA
Sbjct: 30 ITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAF 89
Query: 77 TDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTLKIFRNGQV 120
DV + GVSG P + + NG +
Sbjct: 90 DDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAV-VLSNGTL 132
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 195
Score = 28.8 bits (64), Expect = 0.12
Identities = 7/46 (15%), Positives = 17/46 (36%)
Query: 54 LVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKE 99
++ F++ +C HC + + + K + K G +
Sbjct: 117 VLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGD 162
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli [TaxId: 562]}
Length = 85
Score = 28.1 bits (62), Expect = 0.13
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 55 VMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTL-K 113
V+F C +C + K EK + D +V + KE + T+ +
Sbjct: 4 VIFGRSGCPYCVRAKDLAEKL--SNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQ 61
Query: 114 IFRNGQ 119
IF + Q
Sbjct: 62 IFVDQQ 67
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 28.6 bits (63), Expect = 0.15
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 7/88 (7%)
Query: 42 DFEAVIN----QHETALVMFYAPWCGHCKKLKPE-YEKAATDVKGADPPISFVKVDCTEA 96
FE Q++ ++ C+ L + + A + I + +E
Sbjct: 30 SFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEE 89
Query: 97 GKETCNKHGVSGYPTLKIF--RNGQVSK 122
G+ + + +P + I R GQ
Sbjct: 90 GQRYIQFYKLGDFPYVSILDPRTGQKLV 117
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 28.3 bits (62), Expect = 0.18
Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 26/114 (22%)
Query: 33 SSVLDLGDSDFEAVINQHETALVMFYAPWCGHCKKLKPEYEKAATDVKGADPPI------ 86
S++ + + + + L+ F+A WC C + EK A D K + +
Sbjct: 6 STLKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASP 65
Query: 87 -------------------SFVKVDCTEAGKETCNKHGVSGYPTLKIF-RNGQV 120
T+ G +S YP+ + ++G V
Sbjct: 66 GFLHEKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDV 119
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia
coli [TaxId: 562]}
Length = 76
Score = 27.3 bits (60), Expect = 0.22
Identities = 9/67 (13%), Positives = 14/67 (20%), Gaps = 9/67 (13%)
Query: 54 LVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTLK 113
+ ++ C C K E + VD E G P
Sbjct: 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVDRVPEAAEALRAQGFRQLPV-- 53
Query: 114 IFRNGQV 120
+
Sbjct: 54 VIAGDLS 60
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator
(DsbA) {Escherichia coli [TaxId: 562]}
Length = 188
Score = 27.6 bits (60), Expect = 0.35
Identities = 6/39 (15%), Positives = 15/39 (38%)
Query: 54 LVMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVD 92
++ F++ +C HC + + + K + K
Sbjct: 22 VLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYH 60
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC,
C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Length = 150
Score = 27.1 bits (59), Expect = 0.52
Identities = 12/104 (11%), Positives = 28/104 (26%), Gaps = 38/104 (36%)
Query: 54 LVMFYAPWCGHCKKLKPEYE-------------------------------------KAA 76
+ +F C +C L + + A
Sbjct: 30 VTVFMDITCHYCHLLHQQLKEYNDLGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFAL 89
Query: 77 TDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTLKIFRNGQV 120
+ + + P + + E + GV G P++ + G++
Sbjct: 90 NEAEKGNLPKEVKTPNIVKKHYELGIQFGVRGTPSI-VTSTGEL 132
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of
Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Length = 74
Score = 26.1 bits (57), Expect = 0.55
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 48 NQHETALVMFYAPWCGHCKKLK 69
+Q + ++ +F P C C K K
Sbjct: 1 HQVQESISIFTKPGCPFCAKAK 22
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 26.7 bits (58), Expect = 0.63
Identities = 10/72 (13%), Positives = 19/72 (26%), Gaps = 2/72 (2%)
Query: 54 LVMFYAPWCGHCKKLKPEYEKAATD-VKGADPPISFVKVD-CTEAGKETCNKHGVSGYPT 111
F A WC + P+ + + + + D E K+ K P
Sbjct: 32 FFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91
Query: 112 LKIFRNGQVSKA 123
++
Sbjct: 92 EDRKGMEFLTTG 103
>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 105
Score = 26.2 bits (57), Expect = 0.64
Identities = 11/65 (16%), Positives = 18/65 (27%), Gaps = 2/65 (3%)
Query: 55 VMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTLKI 114
V+F P C C+K + + + D E G P +
Sbjct: 15 VVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPR--V 72
Query: 115 FRNGQ 119
F +
Sbjct: 73 FIGKE 77
>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770
{Enterococcus faecalis [TaxId: 1351]}
Length = 172
Score = 25.3 bits (54), Expect = 1.9
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 54 LVMFYAPWCGHCKKLKPEYEK 74
++ F C +C+K E E+
Sbjct: 28 MIEFINVRCPYCRKWFEESEE 48
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator
(DsbA) {Vibrio cholerae [TaxId: 666]}
Length = 181
Score = 24.6 bits (52), Expect = 4.4
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 54 LVMFYAPWCGHCKKLKPEYEK 74
+ F++ +C HC +P +
Sbjct: 22 VSEFFSFYCPHCNTFEPIIAQ 42
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli, Grx3 [TaxId: 562]}
Length = 82
Score = 23.4 bits (50), Expect = 5.2
Identities = 7/60 (11%), Positives = 16/60 (26%), Gaps = 6/60 (10%)
Query: 55 VMFYAPWCGHCKKLKPEYEKAATDVKGADPPISFVKVDCTEAGKETCNKHGVSGYPTLKI 114
++ C +C + K + +E + G + P + I
Sbjct: 4 EIYTKETCPYCHRAKALLSSKGVSFQELPI------DGNAAKREEMIKRSGRTTVPQIFI 57
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 23.4 bits (49), Expect = 6.9
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 85 PISFVKVDCTEAGKETCNKHGVSGYPTLKI 114
P V ++ E E C + V G P +
Sbjct: 5 PPRVVSLEEPELRLEHCIEFVVRGNPPPTL 34
>d1ppjh_ f.28.1.1 (H:) Non-heme 11 kDa protein of cytochrome bc1
complex (Ubiquinol-cytochrome c reductase) {Cow (Bos
taurus) [TaxId: 9913]}
Length = 66
Score = 22.4 bits (48), Expect = 9.5
Identities = 8/33 (24%), Positives = 10/33 (30%), Gaps = 4/33 (12%)
Query: 63 GHCKKLKPEYEKAATDVKGADPPISFVKVDCTE 95
C K + E V + DCTE
Sbjct: 16 EKCVKARERLELCDERVSSRSQT----EEDCTE 44
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.415
Gapped
Lambda K H
0.267 0.0612 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 463,801
Number of extensions: 19141
Number of successful extensions: 119
Number of sequences better than 10.0: 1
Number of HSP's gapped: 98
Number of HSP's successfully gapped: 59
Length of query: 128
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 53
Effective length of database: 1,377,846
Effective search space: 73025838
Effective search space used: 73025838
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.5 bits)