Query psy9113
Match_columns 281
No_of_seqs 155 out of 1632
Neff 9.6
Searched_HMMs 46136
Date Fri Aug 16 19:17:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9113.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9113hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1177|consensus 100.0 1.9E-37 4.1E-42 267.9 13.2 232 20-266 47-360 (596)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 3.8E-35 8.3E-40 266.1 16.4 228 29-267 15-301 (528)
3 PLN02654 acetate-CoA ligase 100.0 2E-33 4.4E-38 267.4 15.9 235 26-267 91-408 (666)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 2.2E-33 4.8E-38 260.8 14.4 222 17-248 5-286 (534)
5 TIGR02316 propion_prpE propion 100.0 1.5E-32 3.2E-37 260.2 16.3 235 25-266 54-364 (628)
6 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3.7E-32 8E-37 257.4 16.8 236 24-266 58-368 (625)
7 PRK00174 acetyl-CoA synthetase 100.0 7.8E-32 1.7E-36 255.7 17.6 234 26-266 70-377 (637)
8 PLN02614 long-chain acyl-CoA s 100.0 7.2E-32 1.6E-36 256.6 16.2 208 23-242 45-331 (666)
9 PRK08180 feruloyl-CoA synthase 100.0 5E-32 1.1E-36 255.9 14.8 236 22-263 38-341 (614)
10 PLN02861 long-chain-fatty-acid 100.0 2E-31 4.3E-36 253.5 17.2 209 22-242 42-328 (660)
11 PLN02736 long-chain acyl-CoA s 100.0 2.1E-31 4.6E-36 253.2 16.6 209 23-243 44-325 (651)
12 PRK10524 prpE propionyl-CoA sy 100.0 2.5E-31 5.4E-36 251.9 16.9 235 25-266 55-365 (629)
13 COG1022 FAA1 Long-chain acyl-C 100.0 2.1E-31 4.5E-36 245.0 15.8 212 21-244 14-297 (613)
14 KOG1179|consensus 100.0 8.1E-32 1.8E-36 237.3 12.2 233 19-267 73-368 (649)
15 PLN03052 acetate--CoA ligase; 100.0 3.4E-31 7.4E-36 253.6 17.5 230 24-267 175-482 (728)
16 PRK13295 cyclohexanecarboxylat 100.0 1.3E-31 2.8E-36 249.9 14.0 225 12-246 13-306 (547)
17 PTZ00342 acyl-CoA synthetase; 100.0 3.3E-31 7.1E-36 253.0 16.6 211 20-242 58-409 (746)
18 PLN02860 o-succinylbenzoate-Co 100.0 1.6E-31 3.5E-36 250.1 13.4 208 22-244 6-278 (563)
19 PRK06334 long chain fatty acid 100.0 2E-31 4.3E-36 248.2 13.1 235 15-265 11-311 (539)
20 PTZ00237 acetyl-CoA synthetase 100.0 5.2E-31 1.1E-35 250.1 15.7 236 24-266 60-390 (647)
21 PRK07788 acyl-CoA synthetase; 100.0 2.5E-31 5.4E-36 248.1 13.0 227 24-265 50-335 (549)
22 PRK12582 acyl-CoA synthetase; 100.0 5.8E-31 1.3E-35 249.1 14.9 238 22-265 48-355 (624)
23 PRK03640 O-succinylbenzoic aci 100.0 1.1E-30 2.5E-35 239.7 14.8 226 23-265 2-266 (483)
24 PRK06087 short chain acyl-CoA 100.0 1.3E-30 2.8E-35 243.1 14.4 215 18-245 18-295 (547)
25 COG1021 EntE Peptide arylation 100.0 1.5E-31 3.2E-36 226.9 6.8 234 16-267 21-316 (542)
26 PRK08279 long-chain-acyl-CoA s 100.0 1.4E-30 3.1E-35 245.4 14.2 211 20-244 34-306 (600)
27 PRK04319 acetyl-CoA synthetase 100.0 2.7E-30 5.9E-35 242.2 15.5 230 25-265 45-332 (570)
28 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.1E-30 2.5E-35 242.5 12.6 235 16-265 16-311 (527)
29 PRK05857 acyl-CoA synthetase; 100.0 1.6E-30 3.4E-35 242.2 13.5 223 23-263 14-293 (540)
30 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.5E-30 3.3E-35 242.2 12.9 222 13-244 12-302 (538)
31 PRK05852 acyl-CoA synthetase; 100.0 2.8E-30 6E-35 240.3 14.6 233 24-266 17-308 (534)
32 PRK03584 acetoacetyl-CoA synth 100.0 7.6E-30 1.7E-34 242.8 17.9 232 24-266 87-393 (655)
33 PRK07529 AMP-binding domain pr 100.0 2.1E-30 4.5E-35 245.6 13.4 231 23-265 25-342 (632)
34 PRK08314 long-chain-fatty-acid 100.0 3.5E-30 7.6E-35 240.0 14.6 228 20-265 7-314 (546)
35 PRK06839 acyl-CoA synthetase; 100.0 3.6E-30 7.7E-35 237.1 13.8 208 24-245 3-257 (496)
36 PF00501 AMP-binding: AMP-bind 100.0 2.1E-30 4.5E-35 233.7 11.1 203 29-243 1-264 (417)
37 PRK13382 acyl-CoA synthetase; 100.0 6.2E-30 1.3E-34 238.1 13.9 207 23-244 43-302 (537)
38 PLN02246 4-coumarate--CoA liga 100.0 6.8E-30 1.5E-34 237.8 13.8 211 22-244 22-290 (537)
39 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.6E-29 3.4E-34 240.3 16.4 231 24-266 88-394 (652)
40 PRK07656 long-chain-fatty-acid 100.0 8.2E-30 1.8E-34 235.6 13.9 228 22-264 4-292 (513)
41 PRK08008 caiC putative crotono 100.0 1.2E-29 2.6E-34 235.0 14.8 214 20-243 4-279 (517)
42 PRK06155 crotonobetaine/carnit 100.0 9.4E-30 2E-34 237.2 13.8 209 22-245 20-287 (542)
43 KOG1176|consensus 100.0 1.5E-29 3.3E-34 230.6 14.0 219 29-262 22-305 (537)
44 PRK06145 acyl-CoA synthetase; 100.0 1.4E-29 3.1E-34 233.4 13.8 228 23-265 2-276 (497)
45 TIGR03443 alpha_am_amid L-amin 100.0 6.7E-30 1.5E-34 260.9 12.8 234 23-268 236-544 (1389)
46 PRK06164 acyl-CoA synthetase; 100.0 2.3E-29 5.1E-34 234.3 15.2 223 22-264 9-302 (540)
47 PRK06060 acyl-CoA synthetase; 100.0 1.5E-29 3.2E-34 242.6 14.1 226 24-266 5-273 (705)
48 PRK10252 entF enterobactin syn 100.0 1.2E-29 2.6E-34 257.7 14.1 235 21-267 456-731 (1296)
49 KOG1256|consensus 100.0 5.3E-29 1.2E-33 227.0 15.8 217 18-246 70-368 (691)
50 PRK07638 acyl-CoA synthetase; 100.0 3E-29 6.5E-34 230.8 14.2 205 23-243 1-248 (487)
51 PRK05605 long-chain-fatty-acid 100.0 2.4E-29 5.3E-34 235.8 13.8 228 21-266 30-346 (573)
52 PRK08316 acyl-CoA synthetase; 100.0 2.4E-29 5.2E-34 232.9 13.4 211 22-246 10-280 (523)
53 PLN02387 long-chain-fatty-acid 100.0 9.9E-29 2.1E-33 236.2 17.5 214 23-243 58-364 (696)
54 PRK12467 peptide synthase; Pro 100.0 1.4E-29 3E-34 275.6 13.1 231 22-268 3094-3366(3956)
55 PRK05851 long-chain-fatty-acid 100.0 2.6E-29 5.5E-34 233.4 13.0 230 25-266 4-282 (525)
56 PRK08315 AMP-binding domain pr 100.0 4.5E-29 9.7E-34 233.3 14.7 215 20-245 13-308 (559)
57 PRK10946 entE enterobactin syn 100.0 3.2E-29 6.9E-34 233.3 13.6 214 15-244 17-290 (536)
58 PLN02430 long-chain-fatty-acid 100.0 9.1E-29 2E-33 235.1 16.8 210 21-242 40-328 (660)
59 PRK12583 acyl-CoA synthetase; 100.0 4.1E-29 9E-34 233.4 14.2 212 22-244 17-309 (558)
60 PRK08043 bifunctional acyl-[ac 100.0 2.2E-29 4.8E-34 241.8 12.4 207 22-241 203-470 (718)
61 PRK06187 long-chain-fatty-acid 100.0 4.8E-29 1E-33 230.6 13.7 231 20-266 3-294 (521)
62 PLN03102 acyl-activating enzym 100.0 5.5E-29 1.2E-33 233.7 13.2 207 23-244 14-292 (579)
63 PRK12467 peptide synthase; Pro 100.0 3.7E-29 8.1E-34 272.3 13.4 233 22-268 1573-1849(3956)
64 PTZ00216 acyl-CoA synthetase; 100.0 2.1E-28 4.6E-33 234.2 17.0 208 21-242 67-377 (700)
65 PRK13388 acyl-CoA synthetase; 100.0 1.4E-28 3.1E-33 229.2 15.1 206 22-243 2-256 (540)
66 PRK07768 long-chain-fatty-acid 100.0 1.3E-28 2.7E-33 229.7 14.7 235 24-266 3-286 (545)
67 PLN02574 4-coumarate--CoA liga 100.0 1.1E-28 2.3E-33 230.9 14.3 208 24-244 41-310 (560)
68 PRK07769 long-chain-fatty-acid 100.0 7.7E-29 1.7E-33 235.0 13.2 237 22-266 20-316 (631)
69 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.3E-28 2.8E-33 227.8 14.1 204 24-242 1-265 (515)
70 PRK12316 peptide synthase; Pro 100.0 6.7E-29 1.5E-33 274.1 14.0 232 22-268 2002-2276(5163)
71 PRK07514 malonyl-CoA synthase; 100.0 2.5E-28 5.5E-33 225.3 15.7 224 22-265 2-278 (504)
72 PRK05850 acyl-CoA synthetase; 100.0 7.9E-29 1.7E-33 232.6 12.5 236 23-266 1-298 (578)
73 PRK12316 peptide synthase; Pro 100.0 6.7E-29 1.4E-33 274.1 13.8 239 20-273 4548-4829(5163)
74 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.1E-28 2.4E-33 227.6 12.3 207 24-242 1-248 (502)
75 PRK09274 peptide synthase; Pro 100.0 1.2E-28 2.7E-33 230.0 12.7 212 22-245 5-281 (552)
76 PRK12476 putative fatty-acid-- 100.0 1.4E-28 3.1E-33 232.4 13.1 235 23-266 34-327 (612)
77 PRK06018 putative acyl-CoA syn 100.0 1.9E-28 4.1E-33 228.4 13.7 234 22-265 9-306 (542)
78 PRK09192 acyl-CoA synthetase; 100.0 2E-28 4.4E-33 229.9 13.9 244 15-266 13-309 (579)
79 PRK06188 acyl-CoA synthetase; 100.0 2.1E-28 4.5E-33 227.1 13.3 216 15-246 4-275 (524)
80 PRK05620 long-chain-fatty-acid 100.0 3.1E-28 6.7E-33 228.5 14.6 233 20-264 7-309 (576)
81 PRK07786 long-chain-fatty-acid 100.0 1.4E-28 3E-33 229.3 12.1 230 21-265 15-302 (542)
82 PRK09088 acyl-CoA synthetase; 100.0 6.8E-28 1.5E-32 221.8 16.2 202 30-243 2-243 (488)
83 PLN02330 4-coumarate--CoA liga 100.0 4.2E-28 9E-33 226.3 14.4 210 22-243 27-292 (546)
84 PRK13383 acyl-CoA synthetase; 100.0 3.5E-28 7.5E-33 225.3 13.6 232 21-266 33-305 (516)
85 PRK07008 long-chain-fatty-acid 100.0 5.7E-28 1.2E-32 225.1 15.0 215 23-246 10-287 (539)
86 PRK07867 acyl-CoA synthetase; 100.0 1.1E-27 2.4E-32 222.6 16.7 206 22-243 4-258 (529)
87 PLN02479 acetate-CoA ligase 100.0 5.4E-28 1.2E-32 226.5 14.6 207 23-244 20-301 (567)
88 PRK06178 acyl-CoA synthetase; 100.0 4.6E-28 1E-32 226.9 14.1 213 17-243 27-316 (567)
89 PRK08633 2-acyl-glycerophospho 100.0 2.7E-28 5.8E-33 245.2 13.0 209 23-244 615-890 (1146)
90 PRK07470 acyl-CoA synthetase; 100.0 5.8E-28 1.3E-32 224.3 13.6 211 21-245 5-273 (528)
91 PRK05691 peptide synthase; Val 100.0 3.2E-28 6.9E-33 266.9 13.6 229 22-266 3719-3996(4334)
92 PRK05691 peptide synthase; Val 100.0 4.3E-28 9.4E-33 265.8 13.7 233 22-269 2187-2464(4334)
93 PRK04813 D-alanine--poly(phosp 100.0 6.2E-28 1.4E-32 222.5 12.6 231 23-266 2-273 (503)
94 PRK07798 acyl-CoA synthetase; 100.0 1.1E-27 2.5E-32 222.2 14.3 211 23-245 3-288 (533)
95 PRK05677 long-chain-fatty-acid 99.9 1.1E-27 2.4E-32 224.2 13.6 208 23-243 24-317 (562)
96 TIGR03205 pimA dicarboxylate-- 99.9 1.6E-27 3.4E-32 222.1 14.3 212 17-242 11-302 (541)
97 PRK06710 long-chain-fatty-acid 99.9 2.5E-27 5.5E-32 221.7 14.4 226 23-265 24-332 (563)
98 PRK08308 acyl-CoA synthetase; 99.9 3.1E-27 6.7E-32 213.2 14.3 199 49-263 5-222 (414)
99 PRK08162 acyl-CoA synthetase; 99.9 2.7E-27 5.8E-32 220.7 13.5 208 22-244 17-288 (545)
100 TIGR02262 benz_CoA_lig benzoat 99.9 4.9E-27 1.1E-31 217.2 14.7 205 26-243 7-269 (508)
101 PRK09029 O-succinylbenzoic aci 99.9 3.6E-27 7.7E-32 215.4 13.4 216 24-264 3-251 (458)
102 PRK12492 long-chain-fatty-acid 99.9 5.4E-27 1.2E-31 219.6 13.5 227 22-265 23-342 (562)
103 PRK07059 Long-chain-fatty-acid 99.9 5.1E-27 1.1E-31 219.5 13.3 228 22-266 22-337 (557)
104 PRK07787 acyl-CoA synthetase; 99.9 7.7E-27 1.7E-31 214.0 13.7 191 33-243 10-233 (471)
105 PRK13390 acyl-CoA synthetase; 99.9 1.1E-26 2.5E-31 214.3 14.8 200 30-242 4-258 (501)
106 PRK08751 putative long-chain f 99.9 9.9E-27 2.1E-31 217.6 14.5 226 23-265 25-338 (560)
107 PTZ00297 pantothenate kinase; 99.9 8.4E-27 1.8E-31 232.3 14.2 205 24-244 428-707 (1452)
108 PRK06814 acylglycerophosphoeth 99.9 6.5E-27 1.4E-31 235.2 13.5 208 23-243 631-900 (1140)
109 PRK07868 acyl-CoA synthetase; 99.9 1.3E-26 2.8E-31 228.8 14.5 225 20-266 444-730 (994)
110 PRK13391 acyl-CoA synthetase; 99.9 3.8E-26 8.3E-31 211.4 14.5 202 30-243 4-264 (511)
111 PRK08974 long-chain-fatty-acid 99.9 4.7E-26 1E-30 213.1 13.9 210 22-244 22-317 (560)
112 TIGR03089 conserved hypothetic 99.9 9.7E-26 2.1E-30 186.8 12.7 176 29-225 2-227 (227)
113 KOG1175|consensus 99.9 1.8E-25 3.9E-30 204.2 14.1 230 29-267 70-370 (626)
114 PRK07445 O-succinylbenzoic aci 99.9 2.8E-25 6E-30 202.7 13.9 180 51-242 18-223 (452)
115 TIGR01923 menE O-succinylbenzo 99.9 2.7E-25 5.9E-30 201.5 13.1 196 54-267 1-233 (436)
116 TIGR01733 AA-adenyl-dom amino 99.9 2.2E-24 4.8E-29 193.7 13.7 201 54-266 1-247 (408)
117 PRK08276 long-chain-fatty-acid 99.9 3.6E-24 7.8E-29 197.7 14.9 207 48-266 7-272 (502)
118 KOG1180|consensus 99.9 1.1E-23 2.3E-28 185.7 16.4 216 13-235 30-344 (678)
119 PRK12406 long-chain-fatty-acid 99.9 3.5E-24 7.6E-29 198.2 13.4 185 49-243 8-260 (509)
120 PLN03051 acyl-activating enzym 99.8 3.7E-21 8.1E-26 177.7 9.4 170 84-265 1-245 (499)
121 COG1020 EntF Non-ribosomal pep 99.8 1.2E-20 2.7E-25 179.3 11.7 236 23-270 227-502 (642)
122 KOG3628|consensus 99.7 2.1E-16 4.6E-21 148.7 13.7 203 23-228 770-1041(1363)
123 TIGR02372 4_coum_CoA_lig 4-cou 99.4 4.2E-13 9E-18 119.9 8.3 103 128-242 95-200 (386)
124 PRK07824 O-succinylbenzoic aci 99.3 2E-12 4.4E-17 114.5 7.3 93 127-226 34-127 (358)
125 KOG1178|consensus 99.2 6.1E-12 1.3E-16 121.4 4.7 211 19-233 30-298 (1032)
126 TIGR02155 PA_CoA_ligase phenyl 99.1 5.4E-11 1.2E-15 107.8 5.6 130 127-266 74-208 (422)
127 TIGR03335 F390_ftsA coenzyme F 99.0 6.3E-10 1.4E-14 101.5 5.7 129 126-266 84-217 (445)
128 KOG3628|consensus 98.5 4E-07 8.6E-12 87.4 7.4 201 24-228 95-366 (1363)
129 COG1541 PaaK Coenzyme F390 syn 97.8 1.8E-05 4E-10 70.6 4.6 135 128-271 90-228 (438)
130 TIGR02304 aden_form_hyp probab 95.8 0.015 3.3E-07 52.8 4.9 126 132-275 104-237 (430)
131 COG1541 PaaK Coenzyme F390 syn 83.1 3.5 7.5E-05 37.5 6.1 59 51-109 108-168 (438)
132 PF04443 LuxE: Acyl-protein sy 76.3 11 0.00025 33.6 7.1 113 128-248 89-214 (365)
133 TIGR03335 F390_ftsA coenzyme F 68.6 22 0.00047 32.6 7.4 58 51-108 104-163 (445)
134 cd01445 TST_Repeats Thiosulfat 64.0 29 0.00063 26.1 6.1 43 63-105 81-126 (138)
135 PF03321 GH3: GH3 auxin-respon 63.4 4.2 9.1E-05 38.2 1.7 26 129-154 81-108 (528)
136 PRK11493 sseA 3-mercaptopyruva 58.3 20 0.00044 30.6 4.9 53 51-103 200-257 (281)
137 COG2236 Predicted phosphoribos 57.0 24 0.00051 28.4 4.7 50 50-102 4-53 (192)
138 cd01449 TST_Repeat_2 Thiosulfa 54.3 38 0.00082 24.2 5.2 41 63-103 64-104 (118)
139 PLN02249 indole-3-acetic acid- 52.9 6.6 0.00014 37.5 1.1 22 132-153 105-127 (597)
140 PLN02723 3-mercaptopyruvate su 50.4 37 0.00081 29.6 5.3 54 52-105 238-297 (320)
141 PF09269 DUF1967: Domain of un 49.3 15 0.00032 24.1 2.0 32 51-82 31-62 (69)
142 cd01519 RHOD_HSP67B2 Member of 48.1 56 0.0012 22.7 5.2 53 51-103 36-92 (106)
143 TIGR03595 Obg_CgtA_exten Obg f 43.8 31 0.00067 22.6 2.9 22 62-83 42-63 (69)
144 PLN02247 indole-3-acetic acid- 43.6 18 0.0004 34.5 2.4 23 132-154 94-117 (606)
145 PF12404 DUF3663: Peptidase ; 42.4 82 0.0018 21.2 4.7 58 35-95 13-71 (77)
146 TIGR02155 PA_CoA_ligase phenyl 41.3 1.1E+02 0.0024 27.5 7.2 60 52-111 94-155 (422)
147 PRK09162 hypoxanthine-guanine 41.2 1.1E+02 0.0024 24.1 6.3 51 50-102 14-64 (181)
148 PLN02620 indole-3-acetic acid- 37.2 15 0.00033 35.1 0.8 23 132-154 106-129 (612)
149 KOG1529|consensus 36.5 29 0.00062 29.6 2.3 83 2-85 10-94 (286)
150 PF01041 DegT_DnrJ_EryC1: DegT 35.9 70 0.0015 28.3 4.9 45 63-110 51-95 (363)
151 COG2897 SseA Rhodanese-related 33.3 1.1E+02 0.0024 26.3 5.3 56 50-105 201-262 (285)
152 TIGR00522 dph5 diphthine synth 32.9 78 0.0017 26.7 4.4 72 14-85 136-207 (257)
153 cd01448 TST_Repeat_1 Thiosulfa 31.6 1.5E+02 0.0033 21.2 5.4 40 64-103 66-106 (122)
154 PF00667 FAD_binding_1: FAD bi 31.0 60 0.0013 26.5 3.4 37 74-110 42-79 (219)
155 TIGR02379 ECA_wecE TDP-4-keto- 30.3 1.5E+02 0.0032 26.5 6.0 40 68-110 62-101 (376)
156 COG2885 OmpA Outer membrane pr 30.3 56 0.0012 26.0 3.0 60 24-84 100-161 (190)
157 COG0399 WecE Predicted pyridox 29.6 1.3E+02 0.0028 27.0 5.4 47 62-111 59-105 (374)
158 smart00450 RHOD Rhodanese Homo 29.5 1.7E+02 0.0037 19.3 6.0 40 64-103 43-82 (100)
159 PF07538 ChW: Clostridial hydr 29.3 38 0.00083 18.9 1.4 13 134-146 15-27 (36)
160 TIGR01203 HGPRTase hypoxanthin 29.2 1.9E+02 0.0041 22.5 5.8 20 53-72 3-22 (166)
161 COG1611 Predicted Rossmann fol 29.0 2.4E+02 0.0053 22.9 6.5 56 56-116 30-85 (205)
162 PF00156 Pribosyltran: Phospho 28.9 2.2E+02 0.0047 20.3 6.0 54 51-107 3-56 (125)
163 PF00501 AMP-binding: AMP-bind 28.8 80 0.0017 28.0 4.1 77 144-228 19-98 (417)
164 PLN02238 hypoxanthine phosphor 28.4 1.8E+02 0.0038 23.2 5.6 51 50-102 9-59 (189)
165 PRK09629 bifunctional thiosulf 28.3 1.3E+02 0.0028 29.0 5.5 41 63-103 209-249 (610)
166 PLN03052 acetate--CoA ligase; 27.9 2E+02 0.0043 28.3 6.9 92 128-228 190-285 (728)
167 TIGR03089 conserved hypothetic 27.8 2.1E+02 0.0046 23.4 6.1 44 70-115 171-216 (227)
168 KOG2631|consensus 27.5 33 0.00072 27.8 1.2 72 5-76 149-227 (238)
169 PRK10287 thiosulfate:cyanide s 27.2 2.3E+02 0.005 20.0 6.2 49 51-106 41-89 (104)
170 PLN02723 3-mercaptopyruvate su 26.8 1.5E+02 0.0033 25.8 5.4 49 63-111 89-139 (320)
171 PTZ00237 acetyl-CoA synthetase 26.6 1.5E+02 0.0032 28.7 5.7 78 144-229 90-170 (647)
172 PF00036 EF-hand_1: EF hand; 26.4 92 0.002 16.3 2.5 19 46-64 10-28 (29)
173 PF13580 SIS_2: SIS domain; PD 26.3 2.7E+02 0.0059 20.6 6.1 52 57-108 83-137 (138)
174 PRK10595 SOS cell division inh 26.2 2.4E+02 0.0052 22.1 5.7 42 66-107 70-111 (164)
175 PRK10696 tRNA 2-thiocytidine b 25.0 4.1E+02 0.0089 22.2 8.3 36 64-99 15-51 (258)
176 PRK02261 methylaspartate mutas 24.5 1.1E+02 0.0023 23.1 3.5 72 170-246 5-80 (137)
177 cd01520 RHOD_YbbB Member of th 24.3 2.8E+02 0.0062 20.1 6.0 39 72-110 81-120 (128)
178 KOG1529|consensus 24.2 1.8E+02 0.004 24.9 5.1 58 51-109 204-267 (286)
179 PLN02654 acetate-CoA ligase 24.1 1.6E+02 0.0034 28.5 5.4 77 144-228 118-197 (666)
180 smart00728 ChW Clostridial hyd 24.0 50 0.0011 19.7 1.3 12 135-146 17-28 (46)
181 PRK11493 sseA 3-mercaptopyruva 23.8 2.5E+02 0.0054 23.8 6.0 49 61-109 71-121 (281)
182 PF08479 POTRA_2: POTRA domain 23.6 1.2E+02 0.0025 19.9 3.2 27 49-75 27-53 (76)
183 PRK14119 gpmA phosphoglyceromu 23.0 2.4E+02 0.0052 23.1 5.6 38 51-88 148-185 (228)
184 PRK09177 xanthine-guanine phos 22.9 2.3E+02 0.005 21.8 5.1 46 50-98 7-52 (156)
185 PLN03102 acyl-activating enzym 22.5 1.4E+02 0.0031 28.2 4.7 75 146-228 39-116 (579)
186 PRK15399 lysine decarboxylase 22.2 2.1E+02 0.0046 28.2 5.7 35 74-111 232-266 (713)
187 smart00467 GS GS motif. Aa app 21.8 12 0.00026 20.2 -1.5 13 135-147 11-24 (30)
188 PRK05205 bifunctional pyrimidi 21.8 3E+02 0.0066 21.5 5.7 45 51-97 5-51 (176)
189 PF08845 SymE_toxin: Toxin Sym 21.7 1.2E+02 0.0025 19.1 2.6 21 66-86 30-50 (57)
190 PLN02736 long-chain acyl-CoA s 21.6 2.7E+02 0.0059 26.8 6.5 76 145-228 77-155 (651)
191 PF01761 DHQ_synthase: 3-dehyd 21.3 2.8E+02 0.0061 23.5 5.7 50 61-110 14-64 (260)
192 PRK10719 eutA reactivating fac 21.3 4.5E+02 0.0098 24.5 7.2 67 39-109 375-443 (475)
193 TIGR02981 phageshock_pspE phag 21.1 3E+02 0.0066 19.2 6.1 50 50-106 38-87 (101)
194 COG0520 csdA Selenocysteine ly 20.9 3E+02 0.0066 25.0 6.2 37 74-110 108-145 (405)
195 PRK10524 prpE propionyl-CoA sy 20.6 2.3E+02 0.005 27.0 5.8 91 128-228 68-161 (629)
196 COG2967 ApaG Uncharacterized p 20.3 77 0.0017 23.2 1.8 23 132-154 81-104 (126)
197 PRK15423 hypoxanthine phosphor 20.3 3.1E+02 0.0066 21.7 5.4 46 51-96 7-53 (178)
198 COG2746 Aminoglycoside N3'-ace 20.2 1.2E+02 0.0026 25.4 3.2 26 62-87 14-39 (251)
199 PF06277 EutA: Ethanolamine ut 20.1 5.8E+02 0.013 23.8 7.7 83 23-109 353-442 (473)
No 1
>KOG1177|consensus
Probab=100.00 E-value=1.9e-37 Score=267.87 Aligned_cols=232 Identities=22% Similarity=0.205 Sum_probs=201.2
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
..++|+++.++-.++..||+.++++. ..+.+.||+|+.+.+.++|+.|..+|+++||+|++..||+.+|+.+++||++
T Consensus 47 l~~~Tigq~l~~~t~~v~dkea~Vf~--~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~ 124 (596)
T KOG1177|consen 47 LDSETIGQLLETTTERVPDKEAAVFD--HEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACAR 124 (596)
T ss_pred cccccHHHHHHHHhhccCcceEEEEe--eccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHH
Confidence 46679999999999999999998875 3456799999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEeecCCCCCCcCC-------------------------------------------------------------
Q psy9113 100 IGAVHSIVVSKCSGDDMST------------------------------------------------------------- 118 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~------------------------------------------------------------- 118 (281)
+|.+.+++||.+..+++++
T Consensus 125 AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~ 204 (596)
T KOG1177|consen 125 AGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLP 204 (596)
T ss_pred hceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCC
Confidence 9999999999999998888
Q ss_pred -------------------cC-CCchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCc
Q psy9113 119 -------------------VP-ANSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTAD 177 (281)
Q Consensus 119 -------------------~~-~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~p 177 (281)
++ ......+++++ |.|||||||.|||+.+||.++++ +........++.+++++++..|
T Consensus 205 Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~N-na~~vg~r~g~~e~~~i~~~~P 283 (596)
T KOG1177|consen 205 GAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLN-NARAVGARAGYNEKHRICIPNP 283 (596)
T ss_pred CceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhh-hHHHHHHHhCcCcceEEEecCc
Confidence 00 01111226788 99999999999999999999999 8888888899999999999999
Q ss_pred hhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchh
Q psy9113 178 VGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISS 257 (281)
Q Consensus 178 l~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~s 257 (281)
++|.+|...+++++|..|++++++ .. .+++...++.|+++|+|+++ ..|.|+..+++.... ..+++++
T Consensus 284 l~H~~G~~~~~ma~l~~gat~Vfp--~~---~f~~k~alqai~~ekcT~l~---gtPtM~~Dlln~~~~----~~~~~s~ 351 (596)
T KOG1177|consen 284 LYHCFGCVLGVMAALMHGATIVFP--AP---SFDPKDALQAISNEKCTTLY---GTPTMFVDLLNIPQK----QQVDLSS 351 (596)
T ss_pred hHHHHHHHHHHHHHHHhCcEEEee--CC---CCChHHHHHHHHhhceEEEe---cChHHHHHHhcchhh----ccCchhh
Confidence 999999889999999999999997 42 79999999999999999976 555666677777766 4467777
Q ss_pred hhhccCCCc
Q psy9113 258 LMWAGSLDI 266 (281)
Q Consensus 258 l~~~g~~g~ 266 (281)
++-+--.|.
T Consensus 352 lr~~vigGa 360 (596)
T KOG1177|consen 352 LRKGVIGGA 360 (596)
T ss_pred hhhheeCCC
Confidence 765544444
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=3.8e-35 Score=266.07 Aligned_cols=228 Identities=35% Similarity=0.520 Sum_probs=191.2
Q ss_pred hccCCC-CCCCCCccccCCCC-CCeeeeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEE
Q psy9113 29 LTPLPG-CTPMKPGAAGNDPD-DYSRLTYKKLLEEVCKCANVLKS-KGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHS 105 (281)
Q Consensus 29 l~~~a~-~~pd~~a~~~~~~~-~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v 105 (281)
++++.+ ..+|+.|+++.+.+ ..+.+||+||++.++++|+.|++ .|+ +||+|++++||.+|.++++|||+++|++++
T Consensus 15 ~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~~ 93 (528)
T COG0365 15 LDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPA 93 (528)
T ss_pred hhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEEe
Confidence 444444 24789999886332 33899999999999999999987 567 999999999999999999999999999999
Q ss_pred EeecCCCCCCcCC--------------------------------cCC-----------------------Cchhhhccc
Q psy9113 106 IVVSKCSGDDMST--------------------------------VPA-----------------------NSERERKLK 130 (281)
Q Consensus 106 ~l~~~~~~~~~~~--------------------------------~~~-----------------------~~~~~~~~~ 130 (281)
|+.+.++++++.+ ... ....+.+|+
T Consensus 94 ~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~~~~~~~~~~~~dp 173 (528)
T COG0365 94 VVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKASEKFEFEPLPADDP 173 (528)
T ss_pred ecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhccCCCCCccccCCCCe
Confidence 9999999988877 000 011234688
Q ss_pred c-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCcccc
Q psy9113 131 L-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYW 209 (281)
Q Consensus 131 ~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~ 209 (281)
+ ++|||||||+||||+|+|..+...........+.+.++|++++..++.|++|+.+.++.+|.+|+++++. ++.+..
T Consensus 174 l~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~--eg~p~~ 251 (528)
T COG0365 174 LFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLY--DGRPFY 251 (528)
T ss_pred EEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEe--CCCCCC
Confidence 8 9999999999999999999887756667777788889999999999999999999999999999999999 776655
Q ss_pred ccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcc
Q psy9113 210 CTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIR 267 (281)
Q Consensus 210 ~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~ 267 (281)
+++.+++.+++|++|.++ .+|..++.+++.-. ...++|+||+.++++|..
T Consensus 252 -~~~~~~~~ie~~~vt~~~---tsPT~~R~l~~~g~----~~~~dlssLr~~~SaGEP 301 (528)
T COG0365 252 -SPERLWEALEKYKVTIFG---TSPTFLRRLMKLGL----GEPYDLSSLRVLGSAGEP 301 (528)
T ss_pred -CHHHHHHHHHHhCCceEe---eCHHHHHHHHhcCC----cccccchhheeeeccCCC
Confidence 799999999999999987 66666655554443 267899999999998874
No 3
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2e-33 Score=267.38 Aligned_cols=235 Identities=42% Similarity=0.678 Sum_probs=188.9
Q ss_pred hhhhccCCC-CCCCCCccccCC--CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 26 GHVLTPLPG-CTPMKPGAAGND--PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 26 ~~~l~~~a~-~~pd~~a~~~~~--~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.++|+++++ .+|+++|+++.. .+..+.+||+||.+++.++|+.|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Ga 170 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGA 170 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 567777765 489999998632 23457999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------c----------------------C------C--------C--------------
Q psy9113 103 VHSIVVSKCSGDDMST----------V----------------------P------A--------N-------------- 122 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------~----------------------~------~--------~-------------- 122 (281)
+++|+++.++.+++.+ + . . .
T Consensus 171 v~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (666)
T PLN02654 171 VHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQE 250 (666)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccccccccc
Confidence 9999999888776554 0 0 0 0
Q ss_pred -------------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhh
Q psy9113 123 -------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWIT 182 (281)
Q Consensus 123 -------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 182 (281)
...+.++++ |+|||||||.||||+++|++++..........++++++|++++..|++|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 330 (666)
T PLN02654 251 GRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWIT 330 (666)
T ss_pred CCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhh
Confidence 001236778 999999999999999999998653555566678899999999999999999
Q ss_pred hHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhcc
Q psy9113 183 GHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAG 262 (281)
Q Consensus 183 gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g 262 (281)
|+.+.++.+|+.|+++++. ++.+...++..+++.|+++++|++. .+|.++..+++.... . ...+++++++.++
T Consensus 331 g~~~~~~~~L~~G~tvvl~--~~~~~~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~~-~-~~~~~l~~Lr~i~ 403 (666)
T PLN02654 331 GHSYVTYGPMLNGATVLVF--EGAPNYPDSGRCWDIVDKYKVTIFY---TAPTLVRSLMRDGDE-Y-VTRHSRKSLRVLG 403 (666)
T ss_pred hhHHHHHHHHHcCceEEEE--CCCCCCCCHHHHHHHHHHhCCeEEE---eCHHHHHHHHhhCcc-c-cccCChhheeEEE
Confidence 9888889999999999999 6544457899999999999999976 566666666654321 1 1445677777666
Q ss_pred CCCcc
Q psy9113 263 SLDIR 267 (281)
Q Consensus 263 ~~g~~ 267 (281)
..|..
T Consensus 404 ~~Ge~ 408 (666)
T PLN02654 404 SVGEP 408 (666)
T ss_pred EecCC
Confidence 66653
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.2e-33 Score=260.76 Aligned_cols=222 Identities=23% Similarity=0.225 Sum_probs=187.4
Q ss_pred eccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHH
Q psy9113 17 DTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLA 96 (281)
Q Consensus 17 ~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA 96 (281)
+..+...++.+.+.+.++.+|+++|+.+.+... ++||+||.++++++|+.|++.|+++||+|+++++|+++++++++|
T Consensus 5 ~~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~--~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a 82 (534)
T COG0318 5 MRMTAELTLASLLERAARRNPDRPALIFLGRGG--RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLA 82 (534)
T ss_pred ccccccccHHHHHHHHHHhCCCceEEEEcCCCc--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 345667799999999999999999999742222 699999999999999999999999999999999999999999999
Q ss_pred HHHhcCeEEEeecCCCCCCcCC-----------------------cC---------------------CCch--------
Q psy9113 97 CARIGAVHSIVVSKCSGDDMST-----------------------VP---------------------ANSE-------- 124 (281)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~~~~-----------------------~~---------------------~~~~-------- 124 (281)
|+++|++++|+++.+..+++.+ .. ....
T Consensus 83 ~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (534)
T COG0318 83 ALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGPD 162 (534)
T ss_pred HHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCcc
Confidence 9999999999999997777766 00 0000
Q ss_pred -----hhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhcc--CCCCCEEEEeCchhhhhhHhHHHHhhhccCc
Q psy9113 125 -----RERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFD--YKPGDIYWCTADVGWITGHTYVVYGPLANGA 196 (281)
Q Consensus 125 -----~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~--~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~ 196 (281)
...++++ ++|||||||.||||++||+++.. +.......++ +.++|++++++|++|.+|+...++.++..|+
T Consensus 163 ~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~-~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~ 241 (534)
T COG0318 163 ADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLA-NAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGG 241 (534)
T ss_pred cccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHH-HHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCC
Confidence 1246778 99999999999999999999998 7777777777 8999999999999999999888888899999
Q ss_pred eEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcccc
Q psy9113 197 TSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNF 248 (281)
Q Consensus 197 ~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~ 248 (281)
++++. ++ ..++++.++..+.++++|++. ..|.++..+++......
T Consensus 242 ~~v~~--~~--~~f~~~~~~~~i~~~~~t~~~---~vPt~~~~ll~~~~~~~ 286 (534)
T COG0318 242 TLVLL--SP--EPFDPEEVLWLIEKYKVTVLS---GVPTFLRELLDNPEKDD 286 (534)
T ss_pred EEEeC--CC--CCcCHHHHHHHHHHhcceEEe---cchHHHHHHHhCCccCc
Confidence 99998 31 158999999999999999955 44445556777776643
No 5
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.5e-32 Score=260.19 Aligned_cols=235 Identities=31% Similarity=0.468 Sum_probs=183.8
Q ss_pred hhhhhccCCCCCCCCCccccCC--CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 25 GGHVLTPLPGCTPMKPGAAGND--PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 25 l~~~l~~~a~~~pd~~a~~~~~--~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
..+++.++++.+|+++|+++.+ .+..+.+||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++|+
T Consensus 54 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Ga 133 (628)
T TIGR02316 54 CHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGA 133 (628)
T ss_pred HHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCC
Confidence 3567888888899999998642 23457899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------c--C-----------------------------------C--------------
Q psy9113 103 VHSIVVSKCSGDDMST----------V--P-----------------------------------A-------------- 121 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------~--~-----------------------------------~-------------- 121 (281)
+++|+++.++.+++.+ + . .
T Consensus 134 v~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 213 (628)
T TIGR02316 134 IHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPGRDVDYA 213 (628)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCccccHH
Confidence 9999999887654443 0 0 0
Q ss_pred -------Cc-----hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHH
Q psy9113 122 -------NS-----ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVV 188 (281)
Q Consensus 122 -------~~-----~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~ 188 (281)
.. ....++++ |+|||||||.||||+++|+++...........++++++|++++..|++|+.|+...+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~ 293 (628)
T TIGR02316 214 ALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIV 293 (628)
T ss_pred HHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHH
Confidence 00 01235778 999999999999999999997653455566677889999999999999999987788
Q ss_pred HhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 189 YGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 189 ~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
+.+|..|+++++. ++.+...++..+++.++++++|+++ .+|.++..+.+.... .. ...++++++.+...|.
T Consensus 294 ~~~L~~G~~~v~~--~~~~~~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~~-~~-~~~~l~~lr~~~~gGe 364 (628)
T TIGR02316 294 YAPLLAGAATVLY--EGLPTNPDPGVWWSIVERYGVRTMF---SAPTAIRVLKKQDAA-WL-RKHDLSSLHWLFLAGE 364 (628)
T ss_pred HHHHhccceEEEe--CCCCCCCCHHHHHHHHHHhCCeEEE---eCHHHHHHHHhcCCc-cc-ccCCccceeEEEEecC
Confidence 9999999999998 6544567899999999999999976 555555554443211 11 2345555555444443
No 6
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3.7e-32 Score=257.35 Aligned_cols=236 Identities=45% Similarity=0.716 Sum_probs=185.9
Q ss_pred chhhhhccCCCCCCCCCccccCC--CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGND--PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~--~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
...+.|.++++++||++|+++.. .+..+.+||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++|
T Consensus 58 ~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G 137 (625)
T TIGR02188 58 VSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIG 137 (625)
T ss_pred HHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 44567778888899999998643 2345789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC-----------------------------------cC--CC----------------------
Q psy9113 102 AVHSIVVSKCSGDDMST-----------------------------------VP--AN---------------------- 122 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~-----------------------------------~~--~~---------------------- 122 (281)
++++|+++.++.+++.+ .+ ..
T Consensus 138 av~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (625)
T TIGR02188 138 AIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDVWW 217 (625)
T ss_pred CEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccccH
Confidence 99999999887765443 00 00
Q ss_pred -------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHH
Q psy9113 123 -------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVV 188 (281)
Q Consensus 123 -------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~ 188 (281)
.....++++ |+|||||||+||||+++|+++...........+++.++|++++..|++|..|..+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~ 297 (625)
T TIGR02188 218 HDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIV 297 (625)
T ss_pred HHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHH
Confidence 001225678 999999999999999999998763444455567888999999999999999987788
Q ss_pred HhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 189 YGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 189 ~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
+.+|..|+++++. ++.+...++..+++.++++++|++. ..|.++..+++...... ...++++++.+...|.
T Consensus 298 ~~~l~~G~t~vl~--~~~~~~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~~~~--~~~~l~~lr~i~~~G~ 368 (625)
T TIGR02188 298 YGPLANGATTVMF--EGTPTYPDPGRFWEIIEKHKVTIFY---TAPTAIRALMRLGDEWV--KKHDLSSLRLLGSVGE 368 (625)
T ss_pred HHHHHcCCeEEEE--CCCCCCCChhHHHHHHHHhCCeEEE---eCHHHHHHHHhcCCccc--ccCCccceeEEEEecC
Confidence 9999999999998 5444456899999999999999976 55556666555432211 3345666665555444
No 7
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.98 E-value=7.8e-32 Score=255.65 Aligned_cols=234 Identities=45% Similarity=0.702 Sum_probs=183.5
Q ss_pred hhhhccCCCCCCCCCccccCCC--CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 26 GHVLTPLPGCTPMKPGAAGNDP--DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 26 ~~~l~~~a~~~pd~~a~~~~~~--~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
.+.|.+.++++||++|+++.+. +..+.+||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 4667788888999999986422 24578999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCcCC----------c--CC--------------------------------------------------
Q psy9113 104 HSIVVSKCSGDDMST----------V--PA-------------------------------------------------- 121 (281)
Q Consensus 104 ~v~l~~~~~~~~~~~----------~--~~-------------------------------------------------- 121 (281)
++|+++.++.+++.+ + +.
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWVEGRDLWWHEL 229 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCCCcccHHHH
Confidence 999999988765544 0 00
Q ss_pred ---------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhh
Q psy9113 122 ---------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGP 191 (281)
Q Consensus 122 ---------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~ 191 (281)
......++++ ++|||||||.||||+++|+++...........+++.++|++++..|++|..|+...++.+
T Consensus 230 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 309 (637)
T PRK00174 230 VAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGP 309 (637)
T ss_pred HhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHH
Confidence 0001225678 999999999999999999998763444445557888899999999999999987789999
Q ss_pred hccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 192 LANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 192 l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
|..|+++++. ++.+...+++.+++.++++++|++. .+|.++..+++...... ...++++++.+...|.
T Consensus 310 l~~G~~~v~~--~~~~~~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~~~~--~~~~~~~lr~i~~~Ge 377 (637)
T PRK00174 310 LANGATTLMF--EGVPNYPDPGRFWEVIDKHKVTIFY---TAPTAIRALMKEGDEHP--KKYDLSSLRLLGSVGE 377 (637)
T ss_pred HHcCCEEEEE--CCCCCCCChHHHHHHHHhcCCeEEe---ecHHHHHHHHhcCCccc--ccCCccceeEEEEeCC
Confidence 9999999998 5434456899999999999999977 55666666665432211 2234555554444433
No 8
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.98 E-value=7.2e-32 Score=256.57 Aligned_cols=208 Identities=16% Similarity=0.151 Sum_probs=171.9
Q ss_pred cchhhhhccCCCCCCCCCccccCC---C--CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHH
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGND---P--DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLAC 97 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~---~--~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~ 97 (281)
.|+.+++.+.++++||++|+.+.+ . +..+.+||+|+.++++++|+.|+++|+++||+|+++++|+++|+++++||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 499999999999999999997421 1 22356899999999999999999999999999999999999999999999
Q ss_pred HHhcCeEEEeecCCCCCCcCC-----------------------cCC-----------C---------------------
Q psy9113 98 ARIGAVHSIVVSKCSGDDMST-----------------------VPA-----------N--------------------- 122 (281)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~~~~-----------------------~~~-----------~--------------------- 122 (281)
+++|+++||+++.++.+++.+ .+. .
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 204 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWD 204 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHH
Confidence 999999999999998877766 000 0
Q ss_pred -------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhh-----ccCCCCCEEEEeCchhhhhh
Q psy9113 123 -------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYV-----FDYKPGDIYWCTADVGWITG 183 (281)
Q Consensus 123 -------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~l~~~pl~h~~g 183 (281)
.....++++ |+|||||||.||||++||+++.. ........ .++.++|++++.+|++|+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~-~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~ 283 (666)
T PLN02614 205 EFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVT-LIAGVIRLLKSANAALTVKDVYLSYLPLAHIFD 283 (666)
T ss_pred HHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHH-HHHHHHhhccccccCCCCCcEEEEeccHHHHHH
Confidence 001135778 99999999999999999999987 55443332 25678999999999999999
Q ss_pred HhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 184 HTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 184 l~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
.. .+..++..|+++++. ..+++.+++.++++++|+++ .+|.++..+++
T Consensus 284 ~~-~~~~~l~~G~~v~~~-------~~~~~~~~~~i~~~~~T~~~---~vP~~~~~l~~ 331 (666)
T PLN02614 284 RV-IEECFIQHGAAIGFW-------RGDVKLLIEDLGELKPTIFC---AVPRVLDRVYS 331 (666)
T ss_pred HH-HHHHHHHhCCEEEEe-------CCCHHHHHHHHHHhCCeEEE---ecHHHHHHHHH
Confidence 85 456778899999888 35889999999999999977 55666666654
No 9
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.98 E-value=5e-32 Score=255.92 Aligned_cols=236 Identities=17% Similarity=0.033 Sum_probs=180.0
Q ss_pred ccchhhhhccCCCCCCCCCccccCC-CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGND-PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~-~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
..|+.+.|.+.++++||++|+++.+ .+..+.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~ 117 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYA 117 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 3489999999999999999998642 223579999999999999999999999999999999999999999999999999
Q ss_pred cCeEEEeecCCC-----CCCcCC-----------c--------------C-------------C---------------C
Q psy9113 101 GAVHSIVVSKCS-----GDDMST-----------V--------------P-------------A---------------N 122 (281)
Q Consensus 101 G~~~v~l~~~~~-----~~~~~~-----------~--------------~-------------~---------------~ 122 (281)
|++++|+++.++ .+++.+ . . . .
T Consensus 118 Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 197 (614)
T PRK08180 118 GVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALLATPPTA 197 (614)
T ss_pred CCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHhcccccc
Confidence 999999999876 222211 0 0 0 0
Q ss_pred ------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCC--CCCEEEEeCchhhhhhHhHHHHhhhc
Q psy9113 123 ------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYK--PGDIYWCTADVGWITGHTYVVYGPLA 193 (281)
Q Consensus 123 ------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~~l~~~pl~h~~gl~~~~~~~l~ 193 (281)
.....++++ |+|||||||.||||++||+++.. ........++.. .++++++.+|++|.+|+...++.+++
T Consensus 198 ~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~ 276 (614)
T PRK08180 198 AVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCA-NQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLY 276 (614)
T ss_pred chhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHH-HHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHHHh
Confidence 001236778 99999999999999999999988 665555555543 56899999999999998778889999
Q ss_pred cCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccC
Q psy9113 194 NGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGS 263 (281)
Q Consensus 194 ~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~ 263 (281)
.|+++++. ++.....+...+++.++++++|.++ .+|.++..+++.+.........++++++.+..
T Consensus 277 ~G~~v~~~--~~~~~~~~~~~~l~~i~~~~~t~~~---~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~ 341 (614)
T PRK08180 277 NGGTLYID--DGKPTPGGFDETLRNLREISPTVYF---NVPKGWEMLVPALERDAALRRRFFSRLKLLFY 341 (614)
T ss_pred cCCEEEEe--CCCccchhHHHHHHHHHHhCCcEEe---chHHHHHHHHHHHHhchhhhhhhccceeEEEE
Confidence 99999998 4211122345678889999999977 55666677776554322112233445554433
No 10
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.97 E-value=2e-31 Score=253.50 Aligned_cols=209 Identities=15% Similarity=0.173 Sum_probs=172.4
Q ss_pred ccchhhhhccCCCCCCCCCccccC-----CCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHH
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGN-----DPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLA 96 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~-----~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA 96 (281)
..|+.+.+.+.++++|+++|+.+. ..+..+.+||+|+.++++++|+.|.++|+++||+|+++++|+++|+++++|
T Consensus 42 ~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 121 (660)
T PLN02861 42 IDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (660)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 348999999999999999998631 123446899999999999999999999999999999999999999999999
Q ss_pred HHHhcCeEEEeecCCCCCCcCC--------------------------cC--CC--------------------------
Q psy9113 97 CARIGAVHSIVVSKCSGDDMST--------------------------VP--AN-------------------------- 122 (281)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~~~~--------------------------~~--~~-------------------------- 122 (281)
|+++|+++||+++.++.+++.+ .+ ..
T Consensus 122 ~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 201 (660)
T PLN02861 122 CNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSW 201 (660)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEH
Confidence 9999999999999998877766 00 00
Q ss_pred -------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhcc-----CCCCCEEEEeCchhhhhh
Q psy9113 123 -------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFD-----YKPGDIYWCTADVGWITG 183 (281)
Q Consensus 123 -------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-----~~~~~~~l~~~pl~h~~g 183 (281)
.....++++ |+|||||||.||||++||+++.. ........++ +.++|++++.+|++|++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~-~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~ 280 (660)
T PLN02861 202 EEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIA-EVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYD 280 (660)
T ss_pred HHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHH-HHHHHHhccccccccCCCCCEEEEECcHHHHHH
Confidence 001236778 99999999999999999999988 5554443332 467899999999999999
Q ss_pred HhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 184 HTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 184 l~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
+.. .+.+++.|+++++. .++++.+++.|+++++|+++ .+|.++..+++
T Consensus 281 ~~~-~~~~l~~G~~v~~~-------~~~~~~~~~~i~~~~~T~~~---~vP~~~~~l~~ 328 (660)
T PLN02861 281 QVI-ETYCISKGASIGFW-------QGDIRYLMEDVQALKPTIFC---GVPRVYDRIYT 328 (660)
T ss_pred HHH-HHHHHHhCCEEEEe-------CCCHHHHHHHHHHhCCcEEe---echHHHHHHHH
Confidence 864 45689999999988 45789999999999999977 55556666654
No 11
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.97 E-value=2.1e-31 Score=253.19 Aligned_cols=209 Identities=15% Similarity=0.067 Sum_probs=176.4
Q ss_pred cchhhhhccCCCCCCCCCcccc---CCC--CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHH
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAG---NDP--DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLAC 97 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~---~~~--~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~ 97 (281)
.|+.+++++.++++||++|+.+ .++ +..+.+||+|+.++++++|+.|+++|+++||+|+++++|+++|+++++||
T Consensus 44 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 123 (651)
T PLN02736 44 GTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHAC 123 (651)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4899999999999999999843 111 23467999999999999999999999999999999999999999999999
Q ss_pred HHhcCeEEEeecCCCCCCcCC--------------------------cC----------C--------------------
Q psy9113 98 ARIGAVHSIVVSKCSGDDMST--------------------------VP----------A-------------------- 121 (281)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~~~~--------------------------~~----------~-------------------- 121 (281)
+++|++++|+++.++.+++.+ .+ .
T Consensus 124 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (651)
T PLN02736 124 SAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSK 203 (651)
T ss_pred HHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHH
Confidence 999999999999988877766 00 0
Q ss_pred -----------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHH
Q psy9113 122 -----------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVY 189 (281)
Q Consensus 122 -----------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~ 189 (281)
......++++ |+|||||||.||||++||+++.. .........++.++|++++.+|++|.+|+. .++
T Consensus 204 ~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~-~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~-~~~ 281 (651)
T PLN02736 204 LLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIA-NVAGSSLSTKFYPSDVHISYLPLAHIYERV-NQI 281 (651)
T ss_pred HHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHH-HHHHHHhccCCCCCCEEEEeCCHHHHHHHH-HHH
Confidence 0001236778 99999999999999999999988 777666777888999999999999999985 678
Q ss_pred hhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 190 GPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 190 ~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
.++..|+++++. ..++..+++.++++++|+++ .+|.++..+++.
T Consensus 282 ~~l~~G~~i~~~-------~~~~~~~~~~i~~~~~t~~~---~vP~~~~~l~~~ 325 (651)
T PLN02736 282 VMLHYGVAVGFY-------QGDNLKLMDDLAALRPTIFC---SVPRLYNRIYDG 325 (651)
T ss_pred HHHHcCCEEEEe-------CCCHHHHHHHHHHhCCcEEe---cchHHHHHHHHH
Confidence 899999999988 34788999999999999977 555566665543
No 12
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.97 E-value=2.5e-31 Score=251.88 Aligned_cols=235 Identities=31% Similarity=0.487 Sum_probs=183.0
Q ss_pred hhhhhccCCCCCCCCCccccCC--CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 25 GGHVLTPLPGCTPMKPGAAGND--PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 25 l~~~l~~~a~~~pd~~a~~~~~--~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
..+++++.++.+||++|+++.+ .+..+.+||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++|+
T Consensus 55 ~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 134 (629)
T PRK10524 55 CHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGA 134 (629)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 3677888888899999998642 23457899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------c--C-----------------------------------C--------------
Q psy9113 103 VHSIVVSKCSGDDMST----------V--P-----------------------------------A-------------- 121 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------~--~-----------------------------------~-------------- 121 (281)
+++|+++.++.+++.+ + . .
T Consensus 135 v~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 214 (629)
T PRK10524 135 IHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDVDYA 214 (629)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCcccHH
Confidence 9999998877654433 0 0 0
Q ss_pred ------C-c-----hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHH
Q psy9113 122 ------N-S-----ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVV 188 (281)
Q Consensus 122 ------~-~-----~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~ 188 (281)
. . ..+.++++ ++|||||||.||||+++|+++...........+++.++|++++..|++|..|+.+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 294 (629)
T PRK10524 215 TLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIV 294 (629)
T ss_pred HHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHH
Confidence 0 0 01235778 999999999999999999987653444555567888899999999999999887788
Q ss_pred HhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 189 YGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 189 ~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
+.+|..|+++++. ++.+...++..+++.++++++|+++ .+|.++..+.+.... . ....++++++.+...|.
T Consensus 295 ~~~l~~G~~~v~~--~g~~~~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~~-~-~~~~~l~~lr~i~~~Ge 365 (629)
T PRK10524 295 YAPLLAGMATIMY--EGLPTRPDAGIWWRIVEKYKVNRMF---SAPTAIRVLKKQDPA-L-LRKHDLSSLRALFLAGE 365 (629)
T ss_pred HHHHhCCCEEEEE--CCCCCCCChHHHHHHHHHcCceEEE---eCHHHHHHHHhcCcc-c-ccccChhheeEEEEeCC
Confidence 9999999999998 6544566889999999999999977 555555554433211 1 13345556655544443
No 13
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.97 E-value=2.1e-31 Score=244.95 Aligned_cols=212 Identities=20% Similarity=0.167 Sum_probs=180.2
Q ss_pred cccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 21 QTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 21 ~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
...++...+.+.++.+|+.+++.......++.+||+|+++++.++|++|+..|+++||+|++++.|+++|+++.+||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~ 93 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILAL 93 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHc
Confidence 34588899999999999988988777778899999999999999999999999977999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC-----------------------------------------------------------cC-
Q psy9113 101 GAVHSIVVSKCSGDDMST-----------------------------------------------------------VP- 120 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~-----------------------------------------------------------~~- 120 (281)
|++.||+.+.++++++.+ ..
T Consensus 94 g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (613)
T COG1022 94 GAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISL 173 (613)
T ss_pred CCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchh
Confidence 999999999999998888 00
Q ss_pred --C--------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhcc-CCCCCEEEEeCchhhhhhHhHHH
Q psy9113 121 --A--------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFD-YKPGDIYWCTADVGWITGHTYVV 188 (281)
Q Consensus 121 --~--------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~l~~~pl~h~~gl~~~~ 188 (281)
. .....++|.+ |+|||||||.|||||+||+|+++ .......... ..++|+.++.+|+.|++..++..
T Consensus 174 ~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~-~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~~ 252 (613)
T COG1022 174 FLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLA-QVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFEG 252 (613)
T ss_pred hhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHH-HHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHHH
Confidence 0 0012357888 99999999999999999999999 8888888886 89999999999999999987654
Q ss_pred HhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 189 YGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 189 ~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
...++.|.++.. ..+++++++.++++|||.++ .+|-+|..+-+..
T Consensus 253 ~~~~~~g~~~~~--------~~~~~~~~~dl~~~rPt~m~---~VPRvwE~i~~~I 297 (613)
T COG1022 253 GLALYGGVTVLF--------KEDPRTLLEDLKEVRPTVMI---GVPRVWEKVYKGI 297 (613)
T ss_pred HHHhhcceEEEe--------cCCHHHHHHHHHHhCCeEEe---echHHHHHHHHHH
Confidence 555555554444 46899999999999999977 5556666554444
No 14
>KOG1179|consensus
Probab=99.97 E-value=8.1e-32 Score=237.32 Aligned_cols=233 Identities=22% Similarity=0.238 Sum_probs=195.0
Q ss_pred cccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHH
Q psy9113 19 FWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACA 98 (281)
Q Consensus 19 ~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~ 98 (281)
.=.+.|+.+++.+.++++|+++|+++. +..+.+||+|+.++++++|+.|..+|++.||.|+++++|.+|++...++++
T Consensus 73 rr~~~ti~~~F~~~vrr~p~k~aii~~--~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLa 150 (649)
T KOG1179|consen 73 RRERRTIAELFLSQVRRQPDKPAIIYE--GPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLA 150 (649)
T ss_pred hccCCcHHHHHHHHHHhCCCccEEEEe--CCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHH
Confidence 345669999999999999999999975 346899999999999999999999999999999999999999999999999
Q ss_pred HhcCeEEEeecCCCCCCcCC----------------------------------------------------------cC
Q psy9113 99 RIGAVHSIVVSKCSGDDMST----------------------------------------------------------VP 120 (281)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~----------------------------------------------------------~~ 120 (281)
++|++...||+++..+.+.| .+
T Consensus 151 KlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~ 230 (649)
T KOG1179|consen 151 KLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHP 230 (649)
T ss_pred hhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCC
Confidence 99999999999999998888 00
Q ss_pred ----CCchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccC
Q psy9113 121 ----ANSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANG 195 (281)
Q Consensus 121 ----~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G 195 (281)
......-.+++ .+|||||||.||+.+++|..... .....-..++++++|+++..+|++|.+|.+.++..++..|
T Consensus 231 vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~-~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~G 309 (649)
T KOG1179|consen 231 VPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQ-GAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHG 309 (649)
T ss_pred CCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHH-HHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcC
Confidence 01111124667 89999999999999999999888 6666777899999999999999999999999999999999
Q ss_pred ceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcc
Q psy9113 196 ATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIR 267 (281)
Q Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~ 267 (281)
+|+++- .+|++.++|+.+.+|++|+. .+.-++.+-+-........+--.++.+-..|+|
T Consensus 310 aT~Vlr------kKFSAS~FW~DC~k~~~Tv~-------QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR 368 (649)
T KOG1179|consen 310 ATVVLR------KKFSASNFWDDCRKYNVTVI-------QYIGELCRYLLNQPPSPEERQHKVRLAYGNGLR 368 (649)
T ss_pred ceEEEe------cccchhhhHHHHHHhCCeee-------ehHHHHHHHHHcCCCChhhcCceEEEEecCCCC
Confidence 999999 59999999999999999994 355555555544333222233445555555554
No 15
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.97 E-value=3.4e-31 Score=253.64 Aligned_cols=230 Identities=26% Similarity=0.274 Sum_probs=180.5
Q ss_pred chhh-hhccCCCCCCCCCccccCCCC----CCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHH
Q psy9113 24 TGGH-VLTPLPGCTPMKPGAAGNDPD----DYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACA 98 (281)
Q Consensus 24 tl~~-~l~~~a~~~pd~~a~~~~~~~----~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~ 98 (281)
++.+ .|++.++.+||++|+++.+.+ ..+.+||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+
T Consensus 175 n~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~ 254 (728)
T PLN03052 175 NVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAII 254 (728)
T ss_pred EHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 4444 565655678999999875322 24689999999999999999999999999999999999999999999999
Q ss_pred HhcCeEEEeecCCCCCCcCC---------------c-------C---------------------------------CC-
Q psy9113 99 RIGAVHSIVVSKCSGDDMST---------------V-------P---------------------------------AN- 122 (281)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~---------------~-------~---------------------------------~~- 122 (281)
++|++++|+++.++.+++.+ . + +.
T Consensus 255 ~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~ 334 (728)
T PLN03052 255 LAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDD 334 (728)
T ss_pred HcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccccCCccHHH
Confidence 99999999999988776554 0 0 00
Q ss_pred ----c------------hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHh
Q psy9113 123 ----S------------ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHT 185 (281)
Q Consensus 123 ----~------------~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~ 185 (281)
. ..+.++++ |+|||||||+||||+++|.+++. +.......++++++|+++...|++|++|.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~-~~~~~~~~~~l~~~d~~~~~~~l~w~~g~- 412 (728)
T PLN03052 335 FLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLR-AAADAWAHLDIRKGDIVCWPTNLGWMMGP- 412 (728)
T ss_pred HHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHH-HHHHHHHhcCCCCCcEEEECCCcHHHhHH-
Confidence 0 00225678 99999999999999999998776 44444445788899999999999999997
Q ss_pred HHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 186 YVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 186 ~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
..++.+|..|+++++. ++ ..++..+++.++++++|++. .+|.++..+.+.-.. ...+|++|+.+++.|
T Consensus 413 ~~v~~~L~~Gat~vl~--~g---~p~~~~~~~~i~~~~vT~l~---~~Pt~l~~l~~~~~~----~~~dlssLr~i~s~G 480 (728)
T PLN03052 413 WLVYASLLNGATLALY--NG---SPLGRGFAKFVQDAKVTMLG---TVPSIVKTWKNTNCM----AGLDWSSIRCFGSTG 480 (728)
T ss_pred HHHHHHHHhCCEEEEe--CC---CCCCChHHHHHHHHCCCEEE---ECHHHHHHHHhcCCc----ccCChhheeEEEecC
Confidence 5788999999999999 54 23567799999999999976 555665555443211 446777887776666
Q ss_pred cc
Q psy9113 266 IR 267 (281)
Q Consensus 266 ~~ 267 (281)
..
T Consensus 481 e~ 482 (728)
T PLN03052 481 EA 482 (728)
T ss_pred CC
Confidence 53
No 16
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.97 E-value=1.3e-31 Score=249.90 Aligned_cols=225 Identities=24% Similarity=0.266 Sum_probs=189.2
Q ss_pred CCCceeccccccchhhhhccCCCCCCCCCccccCCC--CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHH
Q psy9113 12 KCSIVDTFWQTETGGHVLTPLPGCTPMKPGAAGNDP--DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLE 89 (281)
Q Consensus 12 ~~~~~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~--~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~ 89 (281)
...+..+.|.+.|+.+.+.+.++.+||++|+++.+. ..++.+||+||.++++++|+.|.+.|+++|++|+++++|+++
T Consensus 13 ~~~~~~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e 92 (547)
T PRK13295 13 AASIAAGHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWE 92 (547)
T ss_pred HHhhcCCCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH
Confidence 345788999999999999999999999999986431 224799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCeEEEeecCCCCCCcCC----------c--C-------------------------------------
Q psy9113 90 IVVTMLACARIGAVHSIVVSKCSGDDMST----------V--P------------------------------------- 120 (281)
Q Consensus 90 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~----------~--~------------------------------------- 120 (281)
++++++||+++|++++|+++..+.+++.+ + .
T Consensus 93 ~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (547)
T PRK13295 93 FTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFEA 172 (547)
T ss_pred HHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHHH
Confidence 99999999999999999998876554333 0 0
Q ss_pred ------C---C--------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhh
Q psy9113 121 ------A---N--------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWIT 182 (281)
Q Consensus 121 ------~---~--------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 182 (281)
+ . .....++++ ++|||||||.||+|+++|+++.. ........+++.++++++...|++|..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~l~~~p~~h~~ 251 (547)
T PRK13295 173 LLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMA-NIVPYAERLGLGADDVILMASPMAHQT 251 (547)
T ss_pred HhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHH-HHHHHHHHhCCCCCCeEEEecCchhhh
Confidence 0 0 001225677 99999999999999999999988 666666778889999999999999999
Q ss_pred hHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcc
Q psy9113 183 GHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNT 246 (281)
Q Consensus 183 gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~ 246 (281)
|+...++.++..|+++++. + .++++.+++.++++++|.+. .+|.++..++.....
T Consensus 252 g~~~~~~~~l~~G~~~~~~--~----~~~~~~~~~~l~~~~vt~~~---~~p~~~~~l~~~~~~ 306 (547)
T PRK13295 252 GFMYGLMMPVMLGATAVLQ--D----IWDPARAAELIRTEGVTFTM---ASTPFLTDLTRAVKE 306 (547)
T ss_pred hHHHHHHHHHHcCCeEEeC--C----CCCHHHHHHHHHHcCCcEEE---ecHHHHHHHHhcccc
Confidence 9888899999999999998 4 67899999999999999965 445556666665443
No 17
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.97 E-value=3.3e-31 Score=253.05 Aligned_cols=211 Identities=15% Similarity=0.101 Sum_probs=173.0
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCC-CCeeeeHHHHHHHHHHHHHHHHHC---CCCCC-----------CEEEEEe
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPD-DYSRLTYKKLLEEVCKCANVLKSK---GVQKG-----------DRVAIYL 84 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~-~~~~~Ty~~l~~~~~~la~~L~~~---g~~~g-----------~~V~l~~ 84 (281)
....|+.++|.+.++++||++|+.+.+.+ .++.+||+|+.+++.++|++|.++ |+++| |+|++++
T Consensus 58 ~~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~ 137 (746)
T PTZ00342 58 YVYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYG 137 (746)
T ss_pred cccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEc
Confidence 34569999999999999999999864222 358999999999999999999974 99998 9999999
Q ss_pred CCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC-----------------------------------cCC-C-c----
Q psy9113 85 PMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST-----------------------------------VPA-N-S---- 123 (281)
Q Consensus 85 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~-----------------------------------~~~-~-~---- 123 (281)
+|+++|+++++||+++|+++||+++.++.+++.+ +.. . .
T Consensus 138 ~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~ 217 (746)
T PTZ00342 138 SNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEIN 217 (746)
T ss_pred CCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCcccccc
Confidence 9999999999999999999999999999998888 000 0 0
Q ss_pred --------------------------------------------------------------------------------
Q psy9113 124 -------------------------------------------------------------------------------- 123 (281)
Q Consensus 124 -------------------------------------------------------------------------------- 123 (281)
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (746)
T PTZ00342 218 INKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYK 297 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCC
Confidence
Q ss_pred --hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhh--ccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceE
Q psy9113 124 --ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYV--FDYKPGDIYWCTADVGWITGHTYVVYGPLANGATS 198 (281)
Q Consensus 124 --~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~ 198 (281)
...+++++ |+|||||||.||||++||+++.. ........ ......+++++++|++|++++. ..+.+++.|+++
T Consensus 298 ~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~-~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~-~~~~~l~~G~~i 375 (746)
T PTZ00342 298 IQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYN-TVVPLCKHSIFKKYNPKTHLSYLPISHIYERV-IAYLSFMLGGTI 375 (746)
T ss_pred CCCCCccceEEEEEcCCCCCCCCEEEEccHHHHH-HHHHHhhcccccCCCCCeEEEeCcHHHHHHHH-HHHHHHHcCCEE
Confidence 01125678 99999999999999999999998 55443322 1223568999999999999986 567889999999
Q ss_pred EEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 199 VIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 199 v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
++. + .++..+++.|+++++|+++ .+|.++..+.+
T Consensus 376 ~~~--~-----~~~~~l~~di~~~~pT~~~---~VP~v~~~i~~ 409 (746)
T PTZ00342 376 NIW--S-----KDINYFSKDIYNSKGNILA---GVPKVFNRIYT 409 (746)
T ss_pred EEe--C-----CCHHHHHHHHHHhCCcEEE---chHHHHHHHHH
Confidence 998 3 3789999999999999966 45555666654
No 18
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.97 E-value=1.6e-31 Score=250.11 Aligned_cols=208 Identities=20% Similarity=0.210 Sum_probs=176.8
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++.++|++.++++||++|+++ .++.+||+||.+++.++|+.|.++|+++||+|+++++|+++++++++||+++|
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~----~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTIS----GNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEec----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 34889999999999999999984 45789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC----------------------c-----C------------------------C---------
Q psy9113 102 AVHSIVVSKCSGDDMST----------------------V-----P------------------------A--------- 121 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~----------------------~-----~------------------------~--------- 121 (281)
++++|+++.++.+++.+ . + .
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG 161 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccc
Confidence 99999999876665444 0 0 0
Q ss_pred ----Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCc
Q psy9113 122 ----NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGA 196 (281)
Q Consensus 122 ----~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~ 196 (281)
......++++ ++|||||||.||||+++|+++.. ........+++.++|+++...|++|.+|+. .++.++..|+
T Consensus 162 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~-~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~ 239 (563)
T PLN02860 162 TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIV-QSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SALAMLMVGA 239 (563)
T ss_pred cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHH-HHHHHHhhcCCCCCCEEEEecCchhhccHH-HHHHHHHcCc
Confidence 0001225667 99999999999999999999987 555555667888999999999999999984 6789999999
Q ss_pred eEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 197 TSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 197 ~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
++++. + .+++..+++.++++++|.++ .+|.++..+++..
T Consensus 240 ~~v~~--~----~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~ 278 (563)
T PLN02860 240 CHVLL--P----KFDAKAALQAIKQHNVTSMI---TVPAMMADLISLT 278 (563)
T ss_pred eEEec--C----CCCHHHHHHHHHHhCCeeEE---eChHHHHHHHHhh
Confidence 99998 5 67999999999999999977 5566666766654
No 19
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.97 E-value=2e-31 Score=248.21 Aligned_cols=235 Identities=14% Similarity=0.058 Sum_probs=188.7
Q ss_pred ceeccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHH
Q psy9113 15 IVDTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTM 94 (281)
Q Consensus 15 ~~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~ 94 (281)
..-..|...++.+.+.+.++++|+++|+.+ ...+.+||+||.++++++|+.|.+. +||+|+++++|++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~---~~~~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~ 84 (539)
T PRK06334 11 KRGKLRSGKTVLESFLKLCSEMTTATVCWD---EQLGKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAY 84 (539)
T ss_pred hccccCcCCcHHHHHHHHHHhCCCceEEEe---CCCCcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHH
Confidence 344567778999999999999999999885 2346899999999999999999873 8999999999999999999
Q ss_pred HHHHHhcCeEEEeecCCCCCCcCC----------------------c-CC----C-------------------------
Q psy9113 95 LACARIGAVHSIVVSKCSGDDMST----------------------V-PA----N------------------------- 122 (281)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~~~~----------------------~-~~----~------------------------- 122 (281)
+||+++|++++|+++.++.+++.+ . .. +
T Consensus 85 lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 164 (539)
T PRK06334 85 FATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYM 164 (539)
T ss_pred HHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhh
Confidence 999999999999999998877765 0 00 0
Q ss_pred -------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHH
Q psy9113 123 -------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVV 188 (281)
Q Consensus 123 -------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~ 188 (281)
.....++++ ++|||||||.||||+++|+++.. ........+++.++|++++.+|++|.+|+...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~ 243 (539)
T PRK06334 165 SIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLA-NQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCT 243 (539)
T ss_pred cCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHH-HHHHHHHhcCCCCCceEEEecchHhhhhhHHHH
Confidence 011235677 99999999999999999999988 666666677888899999999999999987778
Q ss_pred HhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 189 YGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 189 ~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
+.++..|+++++. +. .++++.+++.|+++++|.+. .+|.++..+++....... ...+|+.+..+|+.-
T Consensus 244 ~~~l~~G~~vv~~--~~---~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~~~~~~-~~~~lr~i~~gG~~l 311 (539)
T PRK06334 244 LFPLLSGVPVVFA--YN---PLYPKKIVEMIDEAKVTFLG---STPVFFDYILKTAKKQES-CLPSLRFVVIGGDAF 311 (539)
T ss_pred HHHHHcCCeEEEe--cC---CCCHHHHHHHHHHhCCcEEE---ecHHHHHHHHHhhhhccc-ccccccEEEECCccC
Confidence 8999999999987 42 47899999999999999977 666666777765433211 223444444445443
No 20
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.97 E-value=5.2e-31 Score=250.13 Aligned_cols=236 Identities=24% Similarity=0.292 Sum_probs=177.4
Q ss_pred chhhhhccCCCC--CCCCCccccCC--CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 24 TGGHVLTPLPGC--TPMKPGAAGND--PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 24 tl~~~l~~~a~~--~pd~~a~~~~~--~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
+..++++++++. +||++|+++.. ....+++||+||.++++++|+.|+++|+++||+|+++++|+++++++++||++
T Consensus 60 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~ 139 (647)
T PTZ00237 60 TCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCAR 139 (647)
T ss_pred HHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 456778787654 79999998742 22357899999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEeecCCCCCCcCC-----------c-C-----------------------------------C-----------
Q psy9113 100 IGAVHSIVVSKCSGDDMST-----------V-P-----------------------------------A----------- 121 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~-----------~-~-----------------------------------~----------- 121 (281)
+|++++|+++.++.+++.+ . . .
T Consensus 140 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 219 (647)
T PTZ00237 140 IGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIE 219 (647)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccccccccc
Confidence 9999999998877665444 0 0 0
Q ss_pred -----C-----------------------chhhhcccc-eeeeecCCCCCceEEEechh-HHHHHHHhhhhhccCCCCCE
Q psy9113 122 -----N-----------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGG-YLLYAATTHKYVFDYKPGDI 171 (281)
Q Consensus 122 -----~-----------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~-l~~~~~~~~~~~~~~~~~~~ 171 (281)
+ ...+.++++ |+|||||||.||||+++|.+ +.. .............+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~-~~~~~~~~~~~~~~d~ 298 (647)
T PTZ00237 220 TIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVG-LKYYWRSIIEKDIPTV 298 (647)
T ss_pred ccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHH-HHHHHHHhcCCCCCcE
Confidence 0 001125678 99999999999999999998 444 4444455566777899
Q ss_pred EEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccc--cccccccceeeeeeccceeccCCchhHHHHHHHHhhccc-c
Q psy9113 172 YWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIY--WCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTN-F 248 (281)
Q Consensus 172 ~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~--~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~-~ 248 (281)
+++..|++|+.+. ..++.+|..|+++++. ++.+. ...+..+++.++++++|++. .+|.++..+++..... .
T Consensus 299 ~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~--~~~~~~p~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~~~~~ 372 (647)
T PTZ00237 299 VFSHSSIGWVSFH-GFLYGSLSLGNTFVMF--EGGIIKNKHIEDDLWNTIEKHKVTHTL---TLPKTIRYLIKTDPEATI 372 (647)
T ss_pred EEEcCCCceEeeH-HHHHHHHhCCcEEEEe--CCCCCCCCCchHHHHHHHHHhCeEEEE---eCHHHHHHHHhhCccccc
Confidence 9999999998765 4688999999999998 43211 12267899999999999977 5566666666532211 1
Q ss_pred ccccccchhhhhccCCCc
Q psy9113 249 FCILYTISSLMWAGSLDI 266 (281)
Q Consensus 249 ~~~~~~L~sl~~~g~~g~ 266 (281)
....+++++++.+...|.
T Consensus 373 ~~~~~~l~~Lr~i~~~G~ 390 (647)
T PTZ00237 373 IRSKYDLSNLKEIWCGGE 390 (647)
T ss_pred cccccCcchheEEEecCc
Confidence 113456677766555554
No 21
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.97 E-value=2.5e-31 Score=248.06 Aligned_cols=227 Identities=19% Similarity=0.183 Sum_probs=185.5
Q ss_pred chhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
++.+++++.++++||++|+++ ..+.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~----~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~ 125 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALID----ERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGAR 125 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEE----CCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 899999999999999999995 4678999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCcCC----------------------cC-------------CC----------------------chhh
Q psy9113 104 HSIVVSKCSGDDMST----------------------VP-------------AN----------------------SERE 126 (281)
Q Consensus 104 ~v~l~~~~~~~~~~~----------------------~~-------------~~----------------------~~~~ 126 (281)
++|+++.++.+++.+ .. .. ....
T Consensus 126 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (549)
T PRK07788 126 IILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSSTAPLPKP 205 (549)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCCCCCCCCC
Confidence 999999988877665 00 00 0001
Q ss_pred hcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCC
Q psy9113 127 RKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPG 205 (281)
Q Consensus 127 ~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~ 205 (281)
.++.+ ++|||||||.||+|+++|+++.. .........++.++++++...|++|.+|+. .++.++..|+++++. +
T Consensus 206 ~~~~~~i~~TSGTTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l~~G~~~v~~--~- 280 (549)
T PRK07788 206 PKPGGIVILTSGTTGTPKGAPRPEPSPLA-PLAGLLSRVPFRAGETTLLPAPMFHATGWA-HLTLAMALGSTVVLR--R- 280 (549)
T ss_pred CCCCcEEEECCCCCCCCCEEeccCccHHH-HHHHHHhhCCCCcCCeEEEccchHHHHHHH-HHHHHHHhCCEEEEC--C-
Confidence 24556 99999999999999999999988 666666677888899999999999999984 678899999999988 4
Q ss_pred ccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcccc-ccccccchhhhhccCCC
Q psy9113 206 EIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNF-FCILYTISSLMWAGSLD 265 (281)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~L~sl~~~g~~g 265 (281)
.++++.+++.++++++|.++ .+|.++..+++...... .....+|+.+..+|+.-
T Consensus 281 ---~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l 335 (549)
T PRK07788 281 ---RFDPEATLEDIAKHKATALV---VVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSAL 335 (549)
T ss_pred ---CCCHHHHHHHHHHhCCcEEE---EHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCC
Confidence 67999999999999999977 66667777776543311 00223445445555543
No 22
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.97 E-value=5.8e-31 Score=249.13 Aligned_cols=238 Identities=16% Similarity=0.079 Sum_probs=176.4
Q ss_pred ccchhhhhccCCCCCCCCCccccCCC--CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDP--DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~--~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
..|+.+.|++.++++||++|+++.+. +..+.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||++
T Consensus 48 ~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 127 (624)
T PRK12582 48 PRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQ 127 (624)
T ss_pred ccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 55899999999999999999986432 2347999999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEeecCCCC-----CCcCC----------------------------------cCC------------------C
Q psy9113 100 IGAVHSIVVSKCSG-----DDMST----------------------------------VPA------------------N 122 (281)
Q Consensus 100 ~G~~~v~l~~~~~~-----~~~~~----------------------------------~~~------------------~ 122 (281)
+|++++|+++.++. +++.+ ... .
T Consensus 128 ~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 207 (624)
T PRK12582 128 AGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAFADLAATPPT 207 (624)
T ss_pred cCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccHHHHhhcCCc
Confidence 99999999998764 22222 000 0
Q ss_pred -------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCC---CCEEEEeCchhhhhhHhHHHHhh
Q psy9113 123 -------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKP---GDIYWCTADVGWITGHTYVVYGP 191 (281)
Q Consensus 123 -------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~---~~~~l~~~pl~h~~gl~~~~~~~ 191 (281)
.....++++ ++|||||||.||||+++|+++.. ............. +++++.++|++|.+|+...++.+
T Consensus 208 ~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~ 286 (624)
T PRK12582 208 AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCA-NIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNGL 286 (624)
T ss_pred chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHH-HHHHHHHhccccCCCCCceEEEechHHHHHhHHHHHHHH
Confidence 001235677 99999999999999999999987 5544444444333 57999999999999987778889
Q ss_pred hccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 192 LANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 192 l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
+..|+++++. +..........+++.++++++|.++ .+|.++..+++.+.........++++++.+...|
T Consensus 287 l~~G~tvvl~--~~~~~~~~~~~~~~~i~~~~~t~~~---~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gG 355 (624)
T PRK12582 287 LWGGGTLYID--DGKPLPGMFEETIRNLREISPTVYG---NVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGG 355 (624)
T ss_pred HhCceEEEEc--CCCcccchHHHHHHHHHhcCCeEEe---ccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecC
Confidence 9999999987 4211111234567778899999966 4445556665554332211223345555554444
No 23
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.97 E-value=1.1e-30 Score=239.74 Aligned_cols=226 Identities=22% Similarity=0.247 Sum_probs=186.8
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
+|+.+.|.+.++.+||++|+.+ .++.+||+|+.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|+
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~ 77 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEF----EEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGA 77 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEe----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCc
Confidence 6899999999999999999995 458999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC-----------c---------------------------CCCchhhhcccc-eeeeecCCCCCc
Q psy9113 103 VHSIVVSKCSGDDMST-----------V---------------------------PANSERERKLKL-RKVVTGSTGKPK 143 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~-----------~---------------------------~~~~~~~~~~~~-i~~TSGTTG~PK 143 (281)
+++|+++..+.+++.. . ........++++ ++|||||||.||
T Consensus 78 ~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK 157 (483)
T PRK03640 78 VAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGISVKFAELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPK 157 (483)
T ss_pred EEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhccccHHHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCc
Confidence 9999999887776554 0 000112235777 999999999999
Q ss_pred eEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeec
Q psy9113 144 GVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYV 223 (281)
Q Consensus 144 ~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~ 223 (281)
+|.++|.++.. ........++++++|+++..+|++|.+|+. .++.++..|+++++. + ..++..+++.+++++
T Consensus 158 ~v~~s~~~~~~-~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~~--~----~~~~~~~~~~i~~~~ 229 (483)
T PRK03640 158 GVIQTYGNHWW-SAVGSALNLGLTEDDCWLAAVPIFHISGLS-ILMRSVIYGMRVVLV--E----KFDAEKINKLLQTGG 229 (483)
T ss_pred EEEEecHHHHH-HHHHHHHhcCCCcCcEEEEecCHHHHHHHH-HHHHHHhcCCEEEec--C----CCCHHHHHHHHHHhC
Confidence 99999999887 555555667889999999999999999975 678999999999998 5 578999999999999
Q ss_pred cceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 224 VYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 224 vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
+|++. .+|.++..++..+.... ....|+.+..+|+.-
T Consensus 230 ~t~l~---~~P~~~~~l~~~~~~~~--~~~~lr~~~~~g~~~ 266 (483)
T PRK03640 230 VTIIS---VVSTMLQRLLERLGEGT--YPSSFRCMLLGGGPA 266 (483)
T ss_pred CcEEE---eHHHHHHHHHhCcCccc--cCCcceEEEEcCCCC
Confidence 99977 66677777776554321 223455555555543
No 24
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.97 E-value=1.3e-30 Score=243.13 Aligned_cols=215 Identities=25% Similarity=0.324 Sum_probs=181.6
Q ss_pred ccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHH
Q psy9113 18 TFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLAC 97 (281)
Q Consensus 18 ~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~ 97 (281)
+.|...|+.+++++.++.+||++|+++ ++++.+||+|+.+++.++|+.|++.|+++||+|+++++|+++++++++||
T Consensus 18 ~~~~~~~l~~~~~~~~~~~pd~~a~~~---~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~ 94 (547)
T PRK06087 18 GYWGDASLADYWQQTARAMPDKIAVVD---NHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLAC 94 (547)
T ss_pred CCCCCCCHHHHHHHHHHHCCCceEEEc---CCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 378888999999999999999999986 34478999999999999999999999999999999999999999999999
Q ss_pred HHhcCeEEEeecCCCCCCcCC-----------cC--------------------C-------------------------
Q psy9113 98 ARIGAVHSIVVSKCSGDDMST-----------VP--------------------A------------------------- 121 (281)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~~~~-----------~~--------------------~------------------------- 121 (281)
+++|++++|+++..+.+++.+ .+ .
T Consensus 95 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (547)
T PRK06087 95 LKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIAD 174 (547)
T ss_pred HHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhcc
Confidence 999999999999887665533 00 0
Q ss_pred ------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhcc
Q psy9113 122 ------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLAN 194 (281)
Q Consensus 122 ------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~ 194 (281)
......++++ ++|||||||.||+|.++|.++.. .........++.++++++...|++|.+|+...++.++..
T Consensus 175 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~-~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 253 (547)
T PRK06087 175 YEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILA-SERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLI 253 (547)
T ss_pred CCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHH-HHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhc
Confidence 0011225677 99999999999999999999987 666666677888999999999999999988889999999
Q ss_pred CceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhc
Q psy9113 195 GATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLN 245 (281)
Q Consensus 195 G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~ 245 (281)
|+++++. + .+++..+++.+++++++.++ +.|+.++ .+++...
T Consensus 254 g~~~~~~--~----~~~~~~~~~~i~~~~~t~~~--~~~~~~~-~~l~~~~ 295 (547)
T PRK06087 254 GARSVLL--D----IFTPDACLALLEQQRCTCML--GATPFIY-DLLNLLE 295 (547)
T ss_pred CCEEEec--C----CCCHHHHHHHHHHcCCCEEe--ccHHHHH-HHHhccc
Confidence 9999998 4 67899999999999999944 4555544 4455443
No 25
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=1.5e-31 Score=226.89 Aligned_cols=234 Identities=19% Similarity=0.237 Sum_probs=195.6
Q ss_pred eeccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHH
Q psy9113 16 VDTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTML 95 (281)
Q Consensus 16 ~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~l 95 (281)
..++|+++|+.++|.+.|+++||++|++ ++++.+||++|.+++.++|..|+++|+++||+|.+.++|..+|++.++
T Consensus 21 ~~GyW~d~~l~d~L~~~A~~~pdriAv~----d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~F 96 (542)
T COG1021 21 EKGYWQDRTLTDILTDHAARYPDRIAVI----DGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFF 96 (542)
T ss_pred hcCcccCCcHHHHHHHHHhhcCCceEEe----cCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHH
Confidence 3579999999999999999999999999 467889999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeEEEeecCCCCCCcCC---------------------------------------------------------
Q psy9113 96 ACARIGAVHSIVVSKCSGDDMST--------------------------------------------------------- 118 (281)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~~~~--------------------------------------------------------- 118 (281)
|++++|+.+|..-|.....|+.+
T Consensus 97 ALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~ 176 (542)
T COG1021 97 ALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHP 176 (542)
T ss_pred HHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCc
Confidence 99999999998777666666655
Q ss_pred ---cCCCchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHh-HHHHhhhc
Q psy9113 119 ---VPANSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHT-YVVYGPLA 193 (281)
Q Consensus 119 ---~~~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~-~~~~~~l~ 193 (281)
.......+.++++ .+.+.||||.||.+..+|..... +.......++++++.++++.+|..|-+.+. =+.+..++
T Consensus 177 a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Y-sv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~ 255 (542)
T COG1021 177 AGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYY-SVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFL 255 (542)
T ss_pred cccCCcCCCCCCCceEEEEecCCCCCCCccccccccceee-eeeehhhhhCcCccceEEEecccccCCCCCCcchhheee
Confidence 0000112235677 89999999999999999999888 888888899999999999999999865442 25688899
Q ss_pred cCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcc
Q psy9113 194 NGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIR 267 (281)
Q Consensus 194 ~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~ 267 (281)
.|+++|+. + ..+|+..+..|++++||++-++|....+|-+..+. ...+|+||+++-..|.|
T Consensus 256 agG~VVla--~----~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~-------~~~~LsSLrllQVGGar 316 (542)
T COG1021 256 AGGTVVLA--P----DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEW-------ERADLSSLRLLQVGGAR 316 (542)
T ss_pred eccEEEEC--C----CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhc-------ccCCchheeEEeecCcc
Confidence 99999999 5 56899999999999999988877777777653332 44677777766555543
No 26
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.97 E-value=1.4e-30 Score=245.40 Aligned_cols=211 Identities=21% Similarity=0.236 Sum_probs=181.7
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
....|+.+.|.+.++++||++|+++ ..+.+||+||.++++++|+.|.+.|+++|++|+++++|+.+++++++||++
T Consensus 34 ~~~~tl~~~l~~~a~~~p~~~Ai~~----~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~ 109 (600)
T PRK08279 34 DSKRSLGDVFEEAAARHPDRPALLF----EDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAK 109 (600)
T ss_pred CCcccHHHHHHHHHHhCCCCcEEEe----CCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4566899999999999999999995 468899999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEeecCCCCCCcCC--------------------------cCC----------------------------C---
Q psy9113 100 IGAVHSIVVSKCSGDDMST--------------------------VPA----------------------------N--- 122 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~--------------------------~~~----------------------------~--- 122 (281)
+|++++++++..+.+++.+ ... +
T Consensus 110 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (600)
T PRK08279 110 LGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPTTN 189 (600)
T ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCccC
Confidence 9999999999988776554 000 0
Q ss_pred ----chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCce
Q psy9113 123 ----SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGAT 197 (281)
Q Consensus 123 ----~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~ 197 (281)
.....++++ ++|||||||.||||+++|+++.. ........+++.++|+++..+|++|.+|+...++.++..|++
T Consensus 190 ~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~ 268 (600)
T PRK08279 190 PASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLK-AMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGAT 268 (600)
T ss_pred CCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHH-HHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcE
Confidence 001235677 99999999999999999999998 777777778899999999999999999998788888999999
Q ss_pred EEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 198 SVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 198 ~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
+++. + .+++..+++.++++++|++. .+|.++..+++..
T Consensus 269 ~v~~--~----~~~~~~~~~~i~~~~~t~~~---~~p~l~~~l~~~~ 306 (600)
T PRK08279 269 LALR--R----KFSASRFWDDVRRYRATAFQ---YIGELCRYLLNQP 306 (600)
T ss_pred EEEc--C----CCCHHHHHHHHHHhcceEEe---ehHHHHHHHHhCC
Confidence 9988 4 68899999999999999976 5556666655543
No 27
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.97 E-value=2.7e-30 Score=242.16 Aligned_cols=230 Identities=31% Similarity=0.442 Sum_probs=184.5
Q ss_pred hhhhhccCCC-CCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 25 GGHVLTPLPG-CTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 25 l~~~l~~~a~-~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
..+.+.+.++ .+||++|+.+.+.+..+.+||+||.+++.++|+.|.++|+++||+|+++++|+++++++++||+++|++
T Consensus 45 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v 124 (570)
T PRK04319 45 AYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAI 124 (570)
T ss_pred HHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 4568888876 579999998754345679999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCcCC-------------------c-----CC---------C-----------------------chhhh
Q psy9113 104 HSIVVSKCSGDDMST-------------------V-----PA---------N-----------------------SERER 127 (281)
Q Consensus 104 ~v~l~~~~~~~~~~~-------------------~-----~~---------~-----------------------~~~~~ 127 (281)
++|+++.++.+++.+ . +. . .....
T Consensus 125 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (570)
T PRK04319 125 VGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASDEFDIEWTDR 204 (570)
T ss_pred EcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCCcCCccccCC
Confidence 999999988776654 0 00 0 00112
Q ss_pred cccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCc
Q psy9113 128 KLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGE 206 (281)
Q Consensus 128 ~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~ 206 (281)
++++ ++|||||||.||||+++|+++.. ........+++.++|++++..|++|.+|+...++.++..|+++++. +.
T Consensus 205 ~~~a~i~~TSGTTG~PKgV~~s~~~l~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~--~~- 280 (570)
T PRK04319 205 EDGAILHYTSGSTGKPKGVLHVHNAMLQ-HYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVID--GG- 280 (570)
T ss_pred CCCEEEEeCCCCCCCCCEEEEecHHHHH-HHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEE--CC-
Confidence 4677 99999999999999999999988 6666667778889999999999999999888899999999999998 42
Q ss_pred cccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 207 IYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 207 ~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
.++++.+++.++++++|+++ .+|.++..+++...... ...++++++.+...|
T Consensus 281 --~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~~~~~--~~~~~~~lr~~~~gG 332 (570)
T PRK04319 281 --RFSPERWYRILEDYKVTVWY---TAPTAIRMLMGAGDDLV--KKYDLSSLRHILSVG 332 (570)
T ss_pred --CCCHHHHHHHHHHcCCeEEE---eCHHHHHHHHhcCCccc--ccCCcccceEEEEcc
Confidence 57899999999999999976 55556666655432111 234555665554444
No 28
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.97 E-value=1.1e-30 Score=242.46 Aligned_cols=235 Identities=15% Similarity=0.170 Sum_probs=189.3
Q ss_pred eeccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHH
Q psy9113 16 VDTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTML 95 (281)
Q Consensus 16 ~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~l 95 (281)
.++.|+..|+.+++.+.++.+|+++|+++ .++.+||+||.++++++|..|.+.|+++|++|+++++|+++++++++
T Consensus 16 ~~~~~~~~~l~~~~~~~a~~~p~~~a~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 91 (527)
T TIGR02275 16 EKGYWQDKPLTDILRDQAARYPDAIAIIC----GNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFF 91 (527)
T ss_pred hcCcccCCcHHHHHHHHHHHCCCceEEEe----CCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHH
Confidence 46789999999999999999999999985 46899999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeEEEeecCCCCCCcCC---------------------------------------cCC---------------
Q psy9113 96 ACARIGAVHSIVVSKCSGDDMST---------------------------------------VPA--------------- 121 (281)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~~~~---------------------------------------~~~--------------- 121 (281)
||+++|++++++++..+.+++.+ ...
T Consensus 92 a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (527)
T TIGR02275 92 ALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLESP 171 (527)
T ss_pred HHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhCc
Confidence 99999999999988766544433 000
Q ss_pred -----Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhH-HHHhhhcc
Q psy9113 122 -----NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTY-VVYGPLAN 194 (281)
Q Consensus 122 -----~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~-~~~~~l~~ 194 (281)
......++++ ++|||||||.||+|+++|+++.. ..........+.++|+++..+|++|.+|+.. .++.++..
T Consensus 172 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 172 AEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYY-SVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred CccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHH-HHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 0011235677 99999999999999999999988 6666666778889999999999999998754 47889999
Q ss_pred CceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 195 GATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 195 G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
|+++++. + .+++..+++.++++++|.+. .+|.++..+++....... ...+++.+..+|+.-
T Consensus 251 G~~~v~~--~----~~~~~~~~~~i~~~~~t~~~---~~p~~~~~l~~~~~~~~~-~~~~lr~~~~gG~~l 311 (527)
T TIGR02275 251 GGCVVLA--P----DPSPTDCFPLIERHKVTVTA---LVPPAVALWMQAASKSRY-DLSSLKLLQVGGAKF 311 (527)
T ss_pred CCeEEEC--C----CCCHHHHHHHHHHhCCeEEE---ecHHHHHHHHhCccccCC-CccceEEEEEcCCCC
Confidence 9999988 4 56889999999999999977 555566666655543221 223444444444433
No 29
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.97 E-value=1.6e-30 Score=242.25 Aligned_cols=223 Identities=21% Similarity=0.221 Sum_probs=177.3
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.|+.+.|.+.|+++|+++|+++. +.++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 14 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~ 91 (540)
T PRK05857 14 STVLDRVFEQARQQPEAIALRRC--DGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGA 91 (540)
T ss_pred cchHHHHHHHHhhCCCcEEEeec--CCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCe
Confidence 37899999999999999999853 3356899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------------------cC-----C-------------------------Cchhhhccc
Q psy9113 103 VHSIVVSKCSGDDMST----------------------VP-----A-------------------------NSERERKLK 130 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------------------~~-----~-------------------------~~~~~~~~~ 130 (281)
+++|+++.++.+++.+ +. . ......+++
T Consensus 92 v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (540)
T PRK05857 92 IAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAASLAGNADQGSEDP 171 (540)
T ss_pred EEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccccccccccCCCCCCe
Confidence 9999999888877665 00 0 001123567
Q ss_pred c-eeeeecCCCCCceEEEechhHHHHHHHhhh----hhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCC
Q psy9113 131 L-RKVVTGSTGKPKGVLHTTGGYLLYAATTHK----YVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPG 205 (281)
Q Consensus 131 ~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~ 205 (281)
+ ++|||||||.||||.++|+++.. ...... ..++...+++.++.+|++|.+|+. ..+.+++.|+++++.
T Consensus 172 a~i~~TSGTTG~PKgV~~sh~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~~G~~~v~~---- 245 (540)
T PRK05857 172 LAMIFTSGTTGEPKAVLLANRTFFA-VPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLMHGGLCVTG---- 245 (540)
T ss_pred EEEEeCCCCCCCCCeEEEechhhhh-hhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhhcceeEEec----
Confidence 7 99999999999999999999877 433222 123455678999999999999985 678899999998765
Q ss_pred ccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccC
Q psy9113 206 EIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGS 263 (281)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~ 263 (281)
..++..+++.+++|++|.++ .+|.++..++..... ...++++++.+..
T Consensus 246 ---~~~~~~~~~~i~~~~it~~~---~~P~~~~~l~~~~~~----~~~~~~~lr~~~~ 293 (540)
T PRK05857 246 ---GENTTSLLEILTTNAVATTC---LVPTLLSKLVSELKS----ANATVPSLRLVGY 293 (540)
T ss_pred ---CCChhHHHHHHHhcCcceEE---eChHHHHHHHhcccc----CCCcCccceEEEE
Confidence 45788999999999999977 566666676665433 2234555554433
No 30
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.97 E-value=1.5e-30 Score=242.20 Aligned_cols=222 Identities=23% Similarity=0.281 Sum_probs=186.6
Q ss_pred CCceeccccccchhhhhccCCCCCCCCCccccC--CCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHH
Q psy9113 13 CSIVDTFWQTETGGHVLTPLPGCTPMKPGAAGN--DPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEI 90 (281)
Q Consensus 13 ~~~~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~--~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~ 90 (281)
....+++|...|+.+.+.+.++.+|+++|++.. ..+.++.+||+||++++.++|..|++.|+++|++|+++++|++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~ 91 (538)
T TIGR03208 12 ASKAAGLWRDRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEF 91 (538)
T ss_pred hhhhcCccccCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH
Confidence 456788998899999999999999999998753 122457999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCeEEEeecCCCCCCcCC----------c--C--------------------------------------
Q psy9113 91 VVTMLACARIGAVHSIVVSKCSGDDMST----------V--P-------------------------------------- 120 (281)
Q Consensus 91 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~----------~--~-------------------------------------- 120 (281)
+++++||+++|++++|+++..+.+++.+ + +
T Consensus 92 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (538)
T TIGR03208 92 TALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRV 171 (538)
T ss_pred HHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHHH
Confidence 9999999999999999998877665543 0 0
Q ss_pred --------CC--------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhh
Q psy9113 121 --------AN--------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITG 183 (281)
Q Consensus 121 --------~~--------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 183 (281)
.. .....++++ ++|||||||.||+|+++|+++.. ........+++..+|+++..+|++|..|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~-~~~~~~~~~~~~~~d~~l~~~pl~h~~g 250 (538)
T TIGR03208 172 LMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFS-NIHPYAERLELGGGDVILMASPMAHQTG 250 (538)
T ss_pred hhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHH-HHHHHHhhcCCCCCCeEEEeCCchhHHH
Confidence 00 011235677 99999999999999999999988 6666667778888999999999999999
Q ss_pred HhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 184 HTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 184 l~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
+...++.++..|+++++. + .++++.+++.++++++|.+. ..|.++..++...
T Consensus 251 ~~~~~~~~l~~g~~~~~~--~----~~~~~~~~~~l~~~~vt~~~---~~p~~~~~l~~~~ 302 (538)
T TIGR03208 251 FMYGLMMPLILNATAVLQ--D----IWNPARAAELIRETGVTFTM---ASTPFLTDLCRAV 302 (538)
T ss_pred HHHHHHHHHHcCCEEEec--C----ccCHHHHHHHHHHhCCeEEe---cCHHHHHHHHhch
Confidence 888899999999999998 4 67999999999999999965 4444555655544
No 31
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.97 E-value=2.8e-30 Score=240.26 Aligned_cols=233 Identities=19% Similarity=0.117 Sum_probs=187.8
Q ss_pred chhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
|+.+++.+.++++||++|+++. ++.+.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 17 ~l~~~l~~~a~~~p~~~ai~~~--~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 94 (534)
T PRK05852 17 RIADLVEVAATRLPEAPALVVT--ADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLV 94 (534)
T ss_pred cHHHHHHHHHHhCCCCcEEEec--CCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcE
Confidence 7999999999999999998863 33468999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCcCC----------c-----------CC------------Cc------------------------hhh
Q psy9113 104 HSIVVSKCSGDDMST----------V-----------PA------------NS------------------------ERE 126 (281)
Q Consensus 104 ~v~l~~~~~~~~~~~----------~-----------~~------------~~------------------------~~~ 126 (281)
++++++.++.+++.+ + .. .. ...
T Consensus 95 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (534)
T PRK05852 95 VVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPTPATSTPEGL 174 (534)
T ss_pred EeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccCCCccccccCCC
Confidence 999999888765444 0 00 00 000
Q ss_pred hcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCC
Q psy9113 127 RKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPG 205 (281)
Q Consensus 127 ~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~ 205 (281)
.++.+ ++|||||||.||+|.++|+++.. ........+++.++|++++..|++|.+|+...++.++..|+++++. +.
T Consensus 175 ~~~~a~il~TSGTTG~PKgv~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~--~~ 251 (534)
T PRK05852 175 RPDDAMIMFTGGTTGLPKMVPWTHANIAS-SVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLP--AR 251 (534)
T ss_pred CCCceEEEeCCCCCCCCcEEEecHHHHHH-HHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeC--CC
Confidence 14567 99999999999999999999988 7777777788899999999999999999988899999999998886 21
Q ss_pred ccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccc-cccccchhhhhccCCCc
Q psy9113 206 EIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFF-CILYTISSLMWAGSLDI 266 (281)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~-~~~~~L~sl~~~g~~g~ 266 (281)
..+++..+++.++++++|.++ .+|.++..+++....... .....++.+..+|+...
T Consensus 252 --~~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~ 308 (534)
T PRK05852 252 --GRFSAHTFWDDIKAVGATWYT---AVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLT 308 (534)
T ss_pred --cCcCHHHHHHHHHHcCCcEEE---cChHHHHHHHhhcccccccccCCCeeEEEECCCCCC
Confidence 257889999999999999977 556666777665543211 12334555555555433
No 32
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.97 E-value=7.6e-30 Score=242.78 Aligned_cols=232 Identities=26% Similarity=0.276 Sum_probs=178.1
Q ss_pred chhhhhccCCCCCCCCCccccCC-CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGND-PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~-~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
|+.+.+.+. .+|+++|+++.+ .+..+.+||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++|+
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Ga 164 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGA 164 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Confidence 666666543 579999998753 23357899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC--------------------------------------------cCCC----------------
Q psy9113 103 VHSIVVSKCSGDDMST--------------------------------------------VPAN---------------- 122 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~--------------------------------------------~~~~---------------- 122 (281)
+++|+++.++.+++.+ .+..
T Consensus 165 v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 244 (655)
T PRK03584 165 IWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALLWE 244 (655)
T ss_pred EEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCCcccHH
Confidence 9999999887654432 0000
Q ss_pred -------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHH
Q psy9113 123 -------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVV 188 (281)
Q Consensus 123 -------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~ 188 (281)
.....++++ |+|||||||.||||+++|++++..........+++.++|+++...++.|.++. .+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~ 322 (655)
T PRK03584 245 DFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN--WL 322 (655)
T ss_pred HHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH--HH
Confidence 001125778 99999999999999999998765245555666788999999999999997653 46
Q ss_pred HhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 189 YGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 189 ~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
+.+|+.|+++++. ++.+...++..+++.++++++|++. .+|.++..+++.-.. . ....++++++.+...|.
T Consensus 323 ~~~L~~G~t~vl~--~~~~~~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~~-~-~~~~~l~sLr~i~~~Ge 393 (655)
T PRK03584 323 VSGLLVGATLVLY--DGSPFYPDPNVLWDLAAEEGVTVFG---TSAKYLDACEKAGLV-P-GETHDLSALRTIGSTGS 393 (655)
T ss_pred HHHHHcCCEEEEe--CCCCCCCCHHHHHHHHHHHCCEEEE---cCHHHHHHHHhcCCC-c-cccCChhheEEEEEecC
Confidence 7899999999998 5444457899999999999999976 666666665543211 1 13356666665555544
No 33
>PRK07529 AMP-binding domain protein; Validated
Probab=99.97 E-value=2.1e-30 Score=245.58 Aligned_cols=231 Identities=22% Similarity=0.206 Sum_probs=182.7
Q ss_pred cchhhhhccCCCCCCCCCccccCC----CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHH
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGND----PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACA 98 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~----~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~ 98 (281)
.|+.++|.+.++++||++|+++.. .+..+++||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+
T Consensus 25 ~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~ 104 (632)
T PRK07529 25 ASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGE 104 (632)
T ss_pred CCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 378999999999999999998632 1246799999999999999999999999999999999999999999999999
Q ss_pred HhcCeEEEeecCCCCCCcCC-----------c-----------------------------CCC----------------
Q psy9113 99 RIGAVHSIVVSKCSGDDMST-----------V-----------------------------PAN---------------- 122 (281)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~-----------~-----------------------------~~~---------------- 122 (281)
++| +++|+++.++.+++.+ . ...
T Consensus 105 ~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 183 (632)
T PRK07529 105 AAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRR 183 (632)
T ss_pred HhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccccccc
Confidence 999 5789999887765544 0 000
Q ss_pred ------------------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCc
Q psy9113 123 ------------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTAD 177 (281)
Q Consensus 123 ------------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~p 177 (281)
.....++++ ++|||||||.||+|++||+++.. ........+++.+++++++.+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~p 262 (632)
T PRK07529 184 KAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVA-NAWLGALLLGLGPGDTVFCGLP 262 (632)
T ss_pred ccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHH-HHHHHHHhcCCCCCCEEEEecC
Confidence 001235677 99999999999999999999988 6766667778889999999999
Q ss_pred hhhhhhHhHHHHhhhccCceEEEecCCCccc--cccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccc
Q psy9113 178 VGWITGHTYVVYGPLANGATSVIVSLPGEIY--WCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTI 255 (281)
Q Consensus 178 l~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~--~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L 255 (281)
++|.+|+...++.++..|+++++. +.... ......+++.++++++|.+. .+|.++..+++... ...++
T Consensus 263 l~h~~~~~~~~~~~l~~G~~vv~~--~~~~~~~~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~-----~~~~~ 332 (632)
T PRK07529 263 LFHVNALLVTGLAPLARGAHVVLA--TPQGYRGPGVIANFWKIVERYRINFLS---GVPTVYAALLQVPV-----DGHDI 332 (632)
T ss_pred chhhhHHHHHHHHHHHCCCEEEec--CccccCcchHHHHHHHHHHHhCCeEEE---eHHHHHHHHHhCcc-----cCCCc
Confidence 999999888899999999999998 31110 11235788999999999977 56666666665432 22345
Q ss_pred hhhhhccCCC
Q psy9113 256 SSLMWAGSLD 265 (281)
Q Consensus 256 ~sl~~~g~~g 265 (281)
++++.+...|
T Consensus 333 ~slr~v~~gg 342 (632)
T PRK07529 333 SSLRYALCGA 342 (632)
T ss_pred cceEEEEEcC
Confidence 5565444433
No 34
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=3.5e-30 Score=240.05 Aligned_cols=228 Identities=22% Similarity=0.225 Sum_probs=187.9
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEeCCcHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSK-GVQKGDRVAIYLPMVLEIVVTMLACA 98 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~g~~V~l~~~n~~~~~~~~lA~~ 98 (281)
.+..|+.+.|.+.++.+|+++|+++ .++.+||+||.+++.++|..|.+. |+++|++|+++++|+++++++++||+
T Consensus 7 ~~~~tl~~~l~~~a~~~~~~~a~~~----~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 82 (546)
T PRK08314 7 LPETSLFHNLEVSARRYPDKTAIVF----YGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAIL 82 (546)
T ss_pred CCCCCHHHHHHHHHHHcCCCcceee----cCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 5677899999999999999999995 457899999999999999999999 99999999999999999999999999
Q ss_pred HhcCeEEEeecCCCCCCcCC----------------------c----CC-------------------------------
Q psy9113 99 RIGAVHSIVVSKCSGDDMST----------------------V----PA------------------------------- 121 (281)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~----------------------~----~~------------------------------- 121 (281)
++|++++|+++..+.+++.+ . ..
T Consensus 83 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (546)
T PRK08314 83 RANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQ 162 (546)
T ss_pred HcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccc
Confidence 99999999999877665533 0 00
Q ss_pred ---------------------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchh
Q psy9113 122 ---------------------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVG 179 (281)
Q Consensus 122 ---------------------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~ 179 (281)
......++++ ++|||||||.||+|.++|+++.. .........++.++|++++.+|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~ 241 (546)
T PRK08314 163 ALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMA-NAVGSVLWSNSTPESVVLAVLPLF 241 (546)
T ss_pred cccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHH-HHHHHHHhhCCCCCceEEEEcCch
Confidence 0001225777 99999999999999999999998 666667778889999999999999
Q ss_pred hhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhh
Q psy9113 180 WITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLM 259 (281)
Q Consensus 180 h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~ 259 (281)
|.+|+...++.++..|+++++. + .++++.+++.++++++|++. .+|.++..++..... ...++++++
T Consensus 242 ~~~g~~~~~~~~l~~G~~i~~~--~----~~~~~~~~~~i~~~~~t~~~---~~p~~~~~ll~~~~~----~~~~~~~l~ 308 (546)
T PRK08314 242 HVTGMVHSMNAPIYAGATVVLM--P----RWDREAAARLIERYRVTHWT---NIPTMVVDFLASPGL----AERDLSSLR 308 (546)
T ss_pred HHHHHHHHHHHHHHcCCeEEec--C----CCCHHHHHHHHHHhcCceec---ccHHHHHHHHhCCCc----cccCchhhh
Confidence 9999888899999999999999 5 57889999999999999976 555555566554322 223445555
Q ss_pred hccCCC
Q psy9113 260 WAGSLD 265 (281)
Q Consensus 260 ~~g~~g 265 (281)
.+...|
T Consensus 309 ~~~~gG 314 (546)
T PRK08314 309 YIGGGG 314 (546)
T ss_pred eeeecc
Confidence 544444
No 35
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.97 E-value=3.6e-30 Score=237.11 Aligned_cols=208 Identities=19% Similarity=0.181 Sum_probs=176.2
Q ss_pred chhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKS-KGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.+.+.+++.|+.+||++|+++ +++.+||+||+++++++|+.|++ .|+.+|++|+++++|+++++++++||+++|+
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~----~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~ 78 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIIT----EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVEC 78 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEE----CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 578899999999999999995 57899999999999999999985 6999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC--------------------------cC------C-------------Cchhhhcccc-eeeee
Q psy9113 103 VHSIVVSKCSGDDMST--------------------------VP------A-------------NSERERKLKL-RKVVT 136 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~--------------------------~~------~-------------~~~~~~~~~~-i~~TS 136 (281)
+++|+++..+.+++.. .. . ......++++ ++|||
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 158 (496)
T PRK06839 79 IAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSLKEIEDRKIDNFVEKNESASFIICYTS 158 (496)
T ss_pred EEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecchHhhhccCCCCCCCCCCCCcEEEEeCC
Confidence 9999999887776554 00 0 0011125677 99999
Q ss_pred cCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccc
Q psy9113 137 GSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGW 216 (281)
Q Consensus 137 GTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~ 216 (281)
||||.||+|.++|+++.. ........+++.++|+++..+|++|.+|+...++.++..|+++++. + .++++.++
T Consensus 159 GTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~--~----~~~~~~~~ 231 (496)
T PRK06839 159 GTTGKPKGAVLTQENMFW-NALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVP--R----KFEPTKAL 231 (496)
T ss_pred CCCCCCcEEEEEhHHHHH-HHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEc--c----CCCHHHHH
Confidence 999999999999999876 5555555667888999999999999999877778899999999887 4 67899999
Q ss_pred eeeeeeccceeccCCchhHHHHHHHHhhc
Q psy9113 217 ITGHTYVVYGPLANGATSVIVSETLKMLN 245 (281)
Q Consensus 217 ~~i~~~~vt~~~~~~~~~~~~~~ll~~~~ 245 (281)
+.++++++|.+. .+|.++..+++...
T Consensus 232 ~~i~~~~~t~~~---~~P~~~~~l~~~~~ 257 (496)
T PRK06839 232 SMIEKHKVTVVM---GVPTIHQALINCSK 257 (496)
T ss_pred HHHHhhCCeEEE---ehHHHHHHHHhCcc
Confidence 999999999966 55666677766543
No 36
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.97 E-value=2.1e-30 Score=233.69 Aligned_cols=203 Identities=28% Similarity=0.308 Sum_probs=165.9
Q ss_pred hccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEee
Q psy9113 29 LTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVV 108 (281)
Q Consensus 29 l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~ 108 (281)
+++.|+++||++|+++ +.++.+||+|++++++++|..|+++|+++|++|+++++|+.+++++++||+++|++++|++
T Consensus 1 f~~~a~~~pd~~a~~~---~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 1 FERQAQRYPDRIALID---DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp HHHHHHHSTTSEEEEE---TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEE
T ss_pred ChhHHhhCCCceEEEE---CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccc
Confidence 3567889999999996 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcCC----------cC--------------------------------CC--c-----h---------hhhccc
Q psy9113 109 SKCSGDDMST----------VP--------------------------------AN--S-----E---------RERKLK 130 (281)
Q Consensus 109 ~~~~~~~~~~----------~~--------------------------------~~--~-----~---------~~~~~~ 130 (281)
|.++.+++.+ +. .. . . ...+++
T Consensus 78 ~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (417)
T PF00501_consen 78 PSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLSDEPQSPEDSPDDP 157 (417)
T ss_dssp TTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHCHCSHSTTHTTTSE
T ss_pred cccccccccccccccceeEEEEeccccccccccchhhhccccccccccccccccccccccccccccccccccCCCCccce
Confidence 9887776544 10 00 0 0 012566
Q ss_pred c-eeeeecCCCCCceEEEechhHHHHHHHhhh--hhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCcc
Q psy9113 131 L-RKVVTGSTGKPKGVLHTTGGYLLYAATTHK--YVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEI 207 (281)
Q Consensus 131 ~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~--~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~ 207 (281)
+ ++|||||||.||+|.++|+++.. ...... ...+++ |++++.+|++|.+|+...++.++..|+++++. +...
T Consensus 158 ~~i~~TSGTTG~pK~v~~t~~~~~~-~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~--~~~~ 232 (417)
T PF00501_consen 158 AFILFTSGTTGKPKGVVLTHRNLLA-QARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLP--SPFD 232 (417)
T ss_dssp EEEEEESSSSSSEEEEEEEHHHHHH-HHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEE--SSHH
T ss_pred eEeeccccccccccccccccccccc-cccccccccccccC--ceEEeecccccccccccccccccccccccccc--cccc
Confidence 7 99999999999999999999988 544432 223333 59999999999999877999999999999999 5322
Q ss_pred ccccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 208 YWCTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 208 ~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
. .+++.+++.++++++|.++ .+|.++..+++.
T Consensus 233 ~-~~~~~~~~~i~~~~~t~~~---~~p~~l~~l~~~ 264 (417)
T PF00501_consen 233 L-FDPESLLELISRYKPTILF---AVPSMLEALLQS 264 (417)
T ss_dssp H-HHHHHHHHHHHHHTESEEE---EEHHHHHHHHHH
T ss_pred c-cccccchhccccccccccc---cccccccccccc
Confidence 2 3468889999999999977 677777887773
No 37
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.97 E-value=6.2e-30 Score=238.14 Aligned_cols=207 Identities=16% Similarity=0.120 Sum_probs=176.3
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.++.+.|.+.++++||++|+++ .++.+||+||.++++++|++|.++|+++|++|+++++|+.++++.++||+++|+
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~----~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 118 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLID----ELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGA 118 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEe----CCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCc
Confidence 5799999999999999999995 456999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC--------------------------cC-------CCc-------------------hhhhccc
Q psy9113 103 VHSIVVSKCSGDDMST--------------------------VP-------ANS-------------------ERERKLK 130 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~--------------------------~~-------~~~-------------------~~~~~~~ 130 (281)
+++|+++.++.+++.+ .+ ... ....++.
T Consensus 119 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (537)
T PRK13382 119 DILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAHAGQRPEPTGRKG 198 (537)
T ss_pred EEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhccCcCCCCCCCCCC
Confidence 9999999988776665 00 000 0012456
Q ss_pred c-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCcccc
Q psy9113 131 L-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYW 209 (281)
Q Consensus 131 ~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~ 209 (281)
+ ++|||||||.||||+++|+++.. ............++++++...|++|.+|+ ..++.++..|+++++. + .
T Consensus 199 ~~il~TSGTTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~~~--~----~ 270 (537)
T PRK13382 199 RVILLTSGTTGTPKGARRSGPGGIG-TLKAILDRTPWRAEEPTVIVAPMFHAWGF-SQLVLAASLACTIVTR--R----R 270 (537)
T ss_pred eEEEECCCCCCCCCEEEeccchHHH-HHHHHHHhhCCCCCCeEEEecChHhhhHH-HHHHHHHhcCcEEEEC--C----C
Confidence 6 99999999999999999988877 66666666777889999999999999998 5789999999999988 4 6
Q ss_pred ccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 210 CTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 210 ~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
++++.+++.++++++|.+. ..|.++..+++..
T Consensus 271 ~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~ 302 (537)
T PRK13382 271 FDPEATLDLIDRHRATGLA---VVPVMFDRIMDLP 302 (537)
T ss_pred cCHHHHHHHHHHhCCEEEE---ehHHHHHHHHcCC
Confidence 8899999999999999977 5666666666543
No 38
>PLN02246 4-coumarate--CoA ligase
Probab=99.96 E-value=6.8e-30 Score=237.79 Aligned_cols=211 Identities=19% Similarity=0.157 Sum_probs=174.7
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..|+.+.+.+.++++||++|+++. ++++.+||+||.++++++|+.|.+.|+++||+|+++++|+.+++++++||+++|
T Consensus 22 ~~~~~~~l~~~~~~~~~~~a~~~~--~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G 99 (537)
T PLN02246 22 HLPLHDYCFERLSEFSDRPCLIDG--ATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRG 99 (537)
T ss_pred CCcHHHHHHHHHHhCCCCeEEEec--CCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 348999999999999999999863 235789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC----------------------c-----------CC--------------------Cchhhhc
Q psy9113 102 AVHSIVVSKCSGDDMST----------------------V-----------PA--------------------NSERERK 128 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~----------------------~-----------~~--------------------~~~~~~~ 128 (281)
++++|+++..+.+++.. . .. ......+
T Consensus 100 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (537)
T PLN02246 100 AVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELTQADENELPEVEISPD 179 (537)
T ss_pred EEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHHhcCCCCCCCCCCCCcc
Confidence 99999999887666544 0 00 0001235
Q ss_pred ccc-eeeeecCCCCCceEEEechhHHHHHHHhhh----hhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecC
Q psy9113 129 LKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHK----YVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSL 203 (281)
Q Consensus 129 ~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~ 203 (281)
+++ ++|||||||.||+|+++|+++.. ...... ..+++.++|+++..+|++|.+++...++.++..|+++++.
T Consensus 180 ~~~~i~~TSGtTG~PKgv~~s~~~l~~-~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~-- 256 (537)
T PLN02246 180 DVVALPYSSGTTGLPKGVMLTHKGLVT-SVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIM-- 256 (537)
T ss_pred CEEEEEeCCCCCCCCceEEEeHHHHHH-HHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEe--
Confidence 667 99999999999999999999987 443322 2467788999999999999999877788999999999999
Q ss_pred CCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 204 PGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 204 ~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
+ .++++.+++.++++++|++. .+|.++..+++..
T Consensus 257 ~----~~~~~~~~~~i~~~~~t~~~---~~p~~~~~l~~~~ 290 (537)
T PLN02246 257 P----KFEIGALLELIQRHKVTIAP---FVPPIVLAIAKSP 290 (537)
T ss_pred C----CCCHHHHHHHHHHhCceEEE---cchHHHHHHhcCc
Confidence 5 57889999999999999966 4444455665544
No 39
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.96 E-value=1.6e-29 Score=240.27 Aligned_cols=231 Identities=25% Similarity=0.311 Sum_probs=174.7
Q ss_pred chhhhhccCCCCCCCCCccccCC-CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGND-PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~-~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
++.+.+.+. .++++|+++.+ .+..+.+||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++|+
T Consensus 88 n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Ga 164 (652)
T TIGR01217 88 NYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGA 164 (652)
T ss_pred eHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCe
Confidence 566655543 46888887643 23457899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC-----------------------------------cC-----------C---------------
Q psy9113 103 VHSIVVSKCSGDDMST-----------------------------------VP-----------A--------------- 121 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~-----------------------------------~~-----------~--------------- 121 (281)
+++|+++.++.+++.+ .+ .
T Consensus 165 v~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 244 (652)
T TIGR01217 165 IWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDL 244 (652)
T ss_pred EEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCcccH
Confidence 9999999886554443 00 0
Q ss_pred --------C-----chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHH
Q psy9113 122 --------N-----SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYV 187 (281)
Q Consensus 122 --------~-----~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~ 187 (281)
. ...+.++++ |+|||||||.||||+++|++++..........+++.++|++++..|+.|+++. .
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~ 322 (652)
T TIGR01217 245 EDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMWN--W 322 (652)
T ss_pred HHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhhH--H
Confidence 0 001125678 99999999999999999998654245555556788999999999999998642 3
Q ss_pred HHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 188 VYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 188 ~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
++.+|+.|+++++. ++.+...++..+++.++++++|++. .++.++.. +...+... ...++|++++.+...|.
T Consensus 323 ~~~~l~~G~t~vl~--~g~~~~~~~~~~~~~i~~~~vt~~~---~~p~~~~~-l~~~~~~~-~~~~~l~sLr~i~~gGe 394 (652)
T TIGR01217 323 LVSGLATGATLVLY--DGSPGFPATNVLWDIAERTGATLFG---TSAKYVMA-CRKAGVHP-ARTHDLSALQCVASTGS 394 (652)
T ss_pred HHHHHhcCcEEEEE--CCCCCCCCchHHHHHHHHhCCeEEe---cCHHHHHH-HHhcCCCc-cccCChhheeEEEeecC
Confidence 56899999999998 5433345788999999999999954 56665543 33332211 13456777776665554
No 40
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=8.2e-30 Score=235.56 Aligned_cols=228 Identities=23% Similarity=0.217 Sum_probs=187.8
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++.+.|.+.++.+|+++|+.+ .++++||+||++++.++|..|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G 79 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVF----GDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAG 79 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEe----CCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcC
Confidence 46899999999999999999995 56799999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC--------------------------cC----------------------------------C
Q psy9113 102 AVHSIVVSKCSGDDMST--------------------------VP----------------------------------A 121 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~--------------------------~~----------------------------------~ 121 (281)
++++|+++..+.+++.. .+ .
T Consensus 80 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (513)
T PRK07656 80 AVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDPAER 159 (513)
T ss_pred eEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCCCCC
Confidence 99999999877665433 00 0
Q ss_pred Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEE
Q psy9113 122 NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVI 200 (281)
Q Consensus 122 ~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~ 200 (281)
......++++ ++|||||||.||+|.++|.++.. ........++++++++++...|++|.+|+...++.++..|+++++
T Consensus 160 ~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 160 APEVDPDDVADILFTSGTTGRPKGAMLTHRQLLS-NAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred cCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHH-HHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 0011235677 99999999999999999999988 666677778899999999999999999988889999999999999
Q ss_pred ecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCC
Q psy9113 201 VSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSL 264 (281)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~ 264 (281)
. + ..+++.+++.++++++|.+. .+|.++..+++....... ...+++.+..+|+.
T Consensus 239 ~--~----~~~~~~~~~~i~~~~~t~~~---~~p~~~~~l~~~~~~~~~-~~~~l~~v~~~g~~ 292 (513)
T PRK07656 239 L--P----VFDPDEVFRLIETERITVLP---GPPTMYNSLLQHPDRSAE-DLSSLRLAVTGAAS 292 (513)
T ss_pred c--C----cCCHHHHHHHHHHhCCeEEe---chHHHHHHHHcCCCcCCC-CccceeeEEecCCC
Confidence 8 4 57899999999999999976 666667777766544321 22234444444443
No 41
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.96 E-value=1.2e-29 Score=235.02 Aligned_cols=214 Identities=19% Similarity=0.211 Sum_probs=176.2
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCC-CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDP-DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACA 98 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~-~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~ 98 (281)
...+|+.+++++.++++||++|+++.+. ++.+.+||+||.++++++|+.|.++|+++||+|+++++|+.+++++++||+
T Consensus 4 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~ 83 (517)
T PRK08008 4 VGGQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLA 83 (517)
T ss_pred cccccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 3456899999999999999999987542 335789999999999999999999999999999999999999999999999
Q ss_pred HhcCeEEEeecCCCCCCcCC----------------------c----C--------------------------------
Q psy9113 99 RIGAVHSIVVSKCSGDDMST----------------------V----P-------------------------------- 120 (281)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~----------------------~----~-------------------------------- 120 (281)
++|++++++++..+.+++.+ + .
T Consensus 84 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (517)
T PRK08008 84 KIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPAT 163 (517)
T ss_pred HcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCcc
Confidence 99999999999877666554 0 0
Q ss_pred --CCchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCce
Q psy9113 121 --ANSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGAT 197 (281)
Q Consensus 121 --~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~ 197 (281)
.......++++ ++|||||||.||+|+++|+++.. ..........+.+++++++.+|++|..+....++.++..|++
T Consensus 164 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 242 (517)
T PRK08008 164 LCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRF-AGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGAT 242 (517)
T ss_pred ccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHH-HHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcE
Confidence 00001225778 99999999999999999999986 433333334567889999999999988887889999999999
Q ss_pred EEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 198 SVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 198 ~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
+++. + .++++.+++.++++++|.+. .+|.++..++..
T Consensus 243 ~~~~--~----~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~ 279 (517)
T PRK08008 243 FVLL--E----KYSARAFWGQVCKYRATITE---CIPMMIRTLMVQ 279 (517)
T ss_pred EEEc--c----ccCHHHHHHHHHHcCCcEEe---chHHHHHHHHhC
Confidence 9999 4 67899999999999999965 444455555543
No 42
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.96 E-value=9.4e-30 Score=237.15 Aligned_cols=209 Identities=21% Similarity=0.235 Sum_probs=178.7
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..|+.++|++.++++||++|+++ .++.+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 20 ~~~l~~~l~~~a~~~p~~~a~~~----~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G 95 (542)
T PRK06155 20 ERTLPAMLARQAERYPDRPLLVF----GGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLG 95 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEe----CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhC
Confidence 45789999999999999999985 46799999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC----------------------c-----CC-------------------------------Cc
Q psy9113 102 AVHSIVVSKCSGDDMST----------------------V-----PA-------------------------------NS 123 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~----------------------~-----~~-------------------------------~~ 123 (281)
++++|+++.++.+++.. . .. ..
T Consensus 96 ~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (542)
T PRK06155 96 AIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPLDAPAPAA 175 (542)
T ss_pred CEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhcccCCCCCCC
Confidence 99999999988766554 0 00 00
Q ss_pred hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEec
Q psy9113 124 ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVS 202 (281)
Q Consensus 124 ~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~ 202 (281)
....++++ ++|||||||.||+|+++|+++.. ........+++.+++++++.+|++|..|+. .++.++..|+++++.
T Consensus 176 ~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~-~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~-~~~~~l~~G~~~~~~- 252 (542)
T PRK06155 176 AVQPGDTAAILYTSGTTGPSKGVCCPHAQFYW-WGRNSAEDLEIGADDVLYTTLPLFHTNALN-AFFQALLAGATYVLE- 252 (542)
T ss_pred CCCCCCeEEEEECCCCCCCCcEEEEEHHHHHH-HHHHHHHhcCCCCCCEEEEecCHHHHHHHH-HHHHHHHcCceEEee-
Confidence 11235778 99999999999999999999987 566666778889999999999999999985 679999999999998
Q ss_pred CCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhc
Q psy9113 203 LPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLN 245 (281)
Q Consensus 203 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~ 245 (281)
+ .++++.+++.++++++|.++ .++.++..+++...
T Consensus 253 -~----~~~~~~~~~~l~~~~~t~~~---~~p~~~~~l~~~~~ 287 (542)
T PRK06155 253 -P----RFSASGFWPAVRRHGATVTY---LLGAMVSILLSQPA 287 (542)
T ss_pred -C----CCCHHHHHHHHHHhCCcEEE---chHHHHHHHHcCcC
Confidence 4 57899999999999999977 55566666665543
No 43
>KOG1176|consensus
Probab=99.96 E-value=1.5e-29 Score=230.63 Aligned_cols=219 Identities=22% Similarity=0.222 Sum_probs=171.3
Q ss_pred hccCCCCCCCC-CccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCC--CCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEE
Q psy9113 29 LTPLPGCTPMK-PGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKG--VQKGDRVAIYLPMVLEIVVTMLACARIGAVHS 105 (281)
Q Consensus 29 l~~~a~~~pd~-~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g--~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v 105 (281)
+.+.+..++++ +.+++... +++.+||+|+++++.++|..|.++| +++||+|+++++|++++++.++||..+|++..
T Consensus 22 l~~~~~~~~~~~~~~i~~~~-~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~ 100 (537)
T KOG1176|consen 22 LGRPAFVYLDRNTSLVYQDS-DGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLN 100 (537)
T ss_pred ccccccccccCcceEEEecC-CCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccc
Confidence 34444444555 66665321 2699999999999999999999876 78899999999999999999999999999999
Q ss_pred EeecCCCCCCcCC---------------------------------cC-----------------C-----------Cch
Q psy9113 106 IVVSKCSGDDMST---------------------------------VP-----------------A-----------NSE 124 (281)
Q Consensus 106 ~l~~~~~~~~~~~---------------------------------~~-----------------~-----------~~~ 124 (281)
+++|.+...++.+ +. . ...
T Consensus 101 ~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (537)
T KOG1176|consen 101 PLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRP 180 (537)
T ss_pred ccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCccccc
Confidence 9999999998888 00 0 001
Q ss_pred hhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecC
Q psy9113 125 RERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSL 203 (281)
Q Consensus 125 ~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~ 203 (281)
...++++ ++|||||||.||||++||+++.. ..............++.++.+|++|.+|+...+.+.+..|++++..
T Consensus 181 ~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~-~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~-- 257 (537)
T KOG1176|consen 181 VSEDDTAAILYSSGTTGLPKGVVLSHRNLIA-NTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICL-- 257 (537)
T ss_pred CCCCCeEEEecCCCCCCCCceEEEecHHHHH-HHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEEC--
Confidence 1126788 99999999999999999999998 6555555666777999999999999999976666677777777777
Q ss_pred CCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhcc
Q psy9113 204 PGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAG 262 (281)
Q Consensus 204 ~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g 262 (281)
..++++.+++.+++||+|+++ .+|+ ++..+++.... ..++|+|++...
T Consensus 258 ----~~f~~~~~~~~i~kykvt~~~--~vP~-~~~~l~~~p~~----~~~~l~sl~~v~ 305 (537)
T KOG1176|consen 258 ----RKFDAELFLDLIEKYKVTHLF--LVPP-VLNMLAKSPIV----KKYDLSSLRSVL 305 (537)
T ss_pred ----CCCCHHHHHHHHHHhCEEEEE--cChH-HHHHHhcCCcc----CcccCCccEEEE
Confidence 378999999999999999966 3444 44555555422 446677776553
No 44
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.96 E-value=1.4e-29 Score=233.36 Aligned_cols=228 Identities=15% Similarity=0.181 Sum_probs=185.4
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
+++.+++.+.++++|+++|+++ .++.+||.||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~----~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~ 77 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVY----RDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGA 77 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEE----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 5788999999999999999985 467999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------------------------cCC------------------Cchhhhcccc-eeee
Q psy9113 103 VHSIVVSKCSGDDMST----------------------------VPA------------------NSERERKLKL-RKVV 135 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------------------------~~~------------------~~~~~~~~~~-i~~T 135 (281)
+++|+++..+.+++.+ ... ......++++ ++||
T Consensus 78 ~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~T 157 (497)
T PRK06145 78 VFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALETPKIVIDAAAQADSRRLAQGGLEIPPQAAVAPTDLVRLMYT 157 (497)
T ss_pred EEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcccceEEecCcccchhHHHhccCCCCCCCCCCCccceEEEEeC
Confidence 9999999887776544 000 0011235677 9999
Q ss_pred ecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCcccccccccc
Q psy9113 136 TGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVG 215 (281)
Q Consensus 136 SGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~ 215 (281)
|||||.||+|.++|+++.. ........+++..+++++...|++|.+++....+.++..|+++++. + .+++..+
T Consensus 158 SGTTG~PK~v~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~--~----~~~~~~~ 230 (497)
T PRK06145 158 SGTTDRPKGVMHSYGNLHW-KSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH--R----EFDPEAV 230 (497)
T ss_pred CCCCCCCcEEEEecHHHHH-HHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC--C----cCCHHHH
Confidence 9999999999999999887 5555556678889999999999999999877778889999999998 5 6789999
Q ss_pred ceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 216 WITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 216 ~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
++.++++++|.+. .+|.++..++........ ....++.+..+|+..
T Consensus 231 ~~~i~~~~~t~~~---~~P~~~~~ll~~~~~~~~-~~~~l~~~~~gG~~~ 276 (497)
T PRK06145 231 LAAIERHRLTCAW---MAPVMLSRVLTVPDRDRF-DLDSLAWCIGGGEKT 276 (497)
T ss_pred HHHHHHhCCeEEE---ehHHHHHHHHcCCCcccc-ccccceEEEecCCCC
Confidence 9999999999977 566677777765443221 222344444445444
No 45
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.96 E-value=6.7e-30 Score=260.94 Aligned_cols=234 Identities=16% Similarity=0.145 Sum_probs=187.5
Q ss_pred cchhhhhccCCCCCCCCCccccCCC-----CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHH
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDP-----DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLAC 97 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~-----~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~ 97 (281)
.++.+++++.++++||++|+++... +.++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 5799999999999999999986321 24679999999999999999999999999999999999999999999999
Q ss_pred HHhcCeEEEeecCCCCCCcCC------------------------------------cC---C--C--------------
Q psy9113 98 ARIGAVHSIVVSKCSGDDMST------------------------------------VP---A--N-------------- 122 (281)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~~~~------------------------------------~~---~--~-------------- 122 (281)
+++|++++|++|.++.+++.+ .+ . .
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEGGETD 395 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccccccccccccccc
Confidence 999999999999877665433 00 0 0
Q ss_pred --------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHH
Q psy9113 123 --------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYV 187 (281)
Q Consensus 123 --------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~ 187 (281)
.....++++ ++|||||||.||||+++|+++.. ........+++.++|+++...|++|..++ ..
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~~~~~~~~~d~~~-~~ 473 (1389)
T TIGR03443 396 VLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAY-YFPWMAKRFGLSENDKFTMLSGIAHDPIQ-RD 473 (1389)
T ss_pred ccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHH-HHHHHHHhcCCCCCCEEEEecCceecchH-HH
Confidence 001235678 99999999999999999999998 77777778889999999999999999886 58
Q ss_pred HHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcc
Q psy9113 188 VYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIR 267 (281)
Q Consensus 188 ~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~ 267 (281)
++.+|+.|+++++. +.. ...++..+++.++++++|+++ .+|.++..+...... ....|+.+.++|+.-.+
T Consensus 474 i~~~L~~G~~l~~~--~~~-~~~~~~~l~~~i~~~~vt~~~---~~Ps~~~~l~~~~~~----~~~~lr~~~~gGe~l~~ 543 (1389)
T TIGR03443 474 MFTPLFLGAQLLVP--TAD-DIGTPGRLAEWMAKYGATVTH---LTPAMGQLLSAQATT----PIPSLHHAFFVGDILTK 543 (1389)
T ss_pred HHHHHhCCCEEEEc--Chh-hccCHHHHHHHHHHhCCeEEE---eCHHHHHHHHhcccc----cCCCccEEEEecccCCH
Confidence 89999999999998 421 245688999999999999977 555555554432211 23456666666765544
Q ss_pred e
Q psy9113 268 M 268 (281)
Q Consensus 268 ~ 268 (281)
.
T Consensus 544 ~ 544 (1389)
T TIGR03443 544 R 544 (1389)
T ss_pred H
Confidence 3
No 46
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.96 E-value=2.3e-29 Score=234.27 Aligned_cols=223 Identities=24% Similarity=0.308 Sum_probs=185.0
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++.++|.+.++.+|+++|+++ ..+.+||+||.+++.++|+.|.+.|+++|++|+++++|+.+++++++||+++|
T Consensus 9 ~~~l~~~l~~~a~~~p~~~a~~~----~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G 84 (540)
T PRK06164 9 ADTLASLLDAHARARPDAVALID----EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLG 84 (540)
T ss_pred CCCHHHHHHHHHHhCCCCeEEec----CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhC
Confidence 44899999999999999999993 56899999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCCc------------C---------------------------CC--------------------
Q psy9113 102 AVHSIVVSKCSGDDMSTV------------P---------------------------AN-------------------- 122 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~~------------~---------------------------~~-------------------- 122 (281)
++++|+++..+.+++.++ + ..
T Consensus 85 ~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (540)
T PRK06164 85 ATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLFAL 164 (540)
T ss_pred cEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCcccccccccc
Confidence 999999998765554440 0 00
Q ss_pred -----------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHh
Q psy9113 123 -----------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYG 190 (281)
Q Consensus 123 -----------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~ 190 (281)
.....++++ ++|||||||+||+|+++|+++.. ........+++.+++++++.+|++|.+|+. .++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~ 242 (540)
T PRK06164 165 PDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLR-HARAIARAYGYDPGAVLLAALPFCGVFGFS-TLLG 242 (540)
T ss_pred cccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHH-HHHHHHHhcCCCCCCEEEEcCCchhHHHHH-HHHH
Confidence 001124566 89999999999999999999998 777777778888999999999999999984 7899
Q ss_pred hhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCC
Q psy9113 191 PLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSL 264 (281)
Q Consensus 191 ~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~ 264 (281)
++..|+++++. + .+++..+++.++++++|+++ .+|.++..+++... ...++++++.++..
T Consensus 243 ~l~~G~~~~~~--~----~~~~~~~~~~l~~~~~t~~~---~~p~~l~~l~~~~~-----~~~~~~~l~~~~~~ 302 (540)
T PRK06164 243 ALAGGAPLVCE--P----VFDAARTARALRRHRVTHTF---GNDEMLRRILDTAG-----ERADFPSARLFGFA 302 (540)
T ss_pred HHhcCceEEec--C----CCCHHHHHHHHHHhCCeeec---CCHHHHHHHHHhhc-----ccCCCcceeeeeec
Confidence 99999999998 5 67899999999999999976 55666666666521 33456666655433
No 47
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.96 E-value=1.5e-29 Score=242.63 Aligned_cols=226 Identities=19% Similarity=0.244 Sum_probs=180.8
Q ss_pred chhhhhccCCCC--CCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 24 TGGHVLTPLPGC--TPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 24 tl~~~l~~~a~~--~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
|+.+++.+.+++ +||++|+++ .+.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~-----~~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG 79 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYA-----ADVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARG 79 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEe-----cCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 788999988876 799999984 2379999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC-------------------cCC-----------------C---chhhhcccc-eeeeecCCCC
Q psy9113 102 AVHSIVVSKCSGDDMST-------------------VPA-----------------N---SERERKLKL-RKVVTGSTGK 141 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~-------------------~~~-----------------~---~~~~~~~~~-i~~TSGTTG~ 141 (281)
++++|++|.++.+++.+ ... + .....++++ ++|||||||.
T Consensus 80 ~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~ 159 (705)
T PRK06060 80 VMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSRVAEAAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGP 159 (705)
T ss_pred cEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccccchhhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCC
Confidence 99999999988877666 000 0 001124677 9999999999
Q ss_pred CceEEEechhHHHHHHHhh-hhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeee
Q psy9113 142 PKGVLHTTGGYLLYAATTH-KYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGH 220 (281)
Q Consensus 142 PK~v~~s~~~l~~~~~~~~-~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~ 220 (281)
||||+++|+++.. ..... ...+++.++++++...|++|.+++...++.+|..|+++++. +. .+++..+++.++
T Consensus 160 PKgV~~sh~~~~~-~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~--~~---~~~~~~~~~~i~ 233 (705)
T PRK06060 160 PKAAIHRHADPLT-FVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVIN--SA---PVTPEAAAILSA 233 (705)
T ss_pred CcEEEEccccHHH-HHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEe--CC---CCCHHHHHHHHH
Confidence 9999999999987 44433 34567888999999999999988877789999999999998 42 467888889999
Q ss_pred eeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 221 TYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 221 ~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
++++|+++ .+|.++..+++..... ...+|+.+..+|+.-.
T Consensus 234 ~~~~t~~~---~~P~~l~~l~~~~~~~---~~~slr~i~~gGe~l~ 273 (705)
T PRK06060 234 RFGPSVLY---GVPNFFARVIDSCSPD---SFRSLRCVVSAGEALE 273 (705)
T ss_pred hcCCeEEe---eHHHHHHHHHHhcccc---cccceeEEEEecCcCC
Confidence 99999976 5666666666544321 2234555555555443
No 48
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.96 E-value=1.2e-29 Score=257.70 Aligned_cols=235 Identities=18% Similarity=0.194 Sum_probs=192.7
Q ss_pred cccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 21 QTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 21 ~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
...++.++|.+.++.+||++|+++ .++.+||+||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++
T Consensus 456 ~~~~l~~~~~~~~~~~p~~~Al~~----~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~ 531 (1296)
T PRK10252 456 PETTLSALVAQQAAKTPDAPALAD----ARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEA 531 (1296)
T ss_pred CcCCHHHHHHHHHHhCCCCeEEEc----CCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 345899999999999999999995 4678999999999999999999999999999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC-------------------cC---------CC-----------chhhhcccc-eeeeecCCC
Q psy9113 101 GAVHSIVVSKCSGDDMST-------------------VP---------AN-----------SERERKLKL-RKVVTGSTG 140 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~-------------------~~---------~~-----------~~~~~~~~~-i~~TSGTTG 140 (281)
|++++|+++..+.+++.+ .. .. .....++++ ++|||||||
T Consensus 532 G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG 611 (1296)
T PRK10252 532 GAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYNAPLAPQGAAPLQLSQPHHTAYIIFTSGSTG 611 (1296)
T ss_pred CCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeecccccccccCCCCCCCCCCCeEEEEECCCCCC
Confidence 999999999988776555 00 00 001235778 999999999
Q ss_pred CCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeee
Q psy9113 141 KPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGH 220 (281)
Q Consensus 141 ~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~ 220 (281)
+||||+++|+++.+ ........+++.++|+++...|++|..++ ..++.+|..|+++++. +.. ...++..+++.++
T Consensus 612 ~PKgV~~~h~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~--~~~-~~~~~~~~~~~i~ 686 (1296)
T PRK10252 612 RPKGVMVGQTAIVN-RLLWMQNHYPLTADDVVLQKTPCSFDVSV-WEFFWPFIAGAKLVMA--EPE-AHRDPLAMQQFFA 686 (1296)
T ss_pred CCCEEEeccHHHHH-HHHHHHHhcCCCCCCEEEEeCCcchhhhH-HHHHHHHhCCCEEEEC--Chh-ccCCHHHHHHHHH
Confidence 99999999999998 77778888999999999999999999886 5889999999999998 321 2578999999999
Q ss_pred eeccceeccCCchhHHHHHHHHhhccccc-cccccchhhhhccCCCcc
Q psy9113 221 TYVVYGPLANGATSVIVSETLKMLNTNFF-CILYTISSLMWAGSLDIR 267 (281)
Q Consensus 221 ~~~vt~~~~~~~~~~~~~~ll~~~~~~~~-~~~~~L~sl~~~g~~g~~ 267 (281)
++++|++. .+|.++..+++....... ....+|+.+.++|+.-..
T Consensus 687 ~~~vt~~~---~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~ 731 (1296)
T PRK10252 687 EYGVTTTH---FVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPA 731 (1296)
T ss_pred HcCCeEEE---eCHHHHHHHHhhhccccccccCCCccEEEEecCCCCH
Confidence 99999977 556666776665433221 122355666666665443
No 49
>KOG1256|consensus
Probab=99.96 E-value=5.3e-29 Score=227.03 Aligned_cols=217 Identities=15% Similarity=0.062 Sum_probs=179.5
Q ss_pred ccccccchhhhhccCCCCCCCCCccccCC----CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHH
Q psy9113 18 TFWQTETGGHVLTPLPGCTPMKPGAAGND----PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVT 93 (281)
Q Consensus 18 ~~~~~~tl~~~l~~~a~~~pd~~a~~~~~----~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~ 93 (281)
.+-...|+++.+.+.+..+|+.+++-... .+..+.+||+|+++++..++..|+++|+++++.|+|+..|++||++.
T Consensus 70 ~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis 149 (691)
T KOG1256|consen 70 PFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIIS 149 (691)
T ss_pred CCCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHh
Confidence 34556699999999999999999985432 46779999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCeEEEeecCCCCCCcCC-------------------------------------------------------
Q psy9113 94 MLACARIGAVHSIVVSKCSGDDMST------------------------------------------------------- 118 (281)
Q Consensus 94 ~lA~~~~G~~~v~l~~~~~~~~~~~------------------------------------------------------- 118 (281)
..||...|.+.||+..+++++++.+
T Consensus 150 ~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv 229 (691)
T KOG1256|consen 150 EMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGV 229 (691)
T ss_pred HHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCe
Confidence 9999999999999999999999888
Q ss_pred ----------------cCCCchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHh----hhh--hccCCCCCEEEEe
Q psy9113 119 ----------------VPANSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATT----HKY--VFDYKPGDIYWCT 175 (281)
Q Consensus 119 ----------------~~~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~----~~~--~~~~~~~~~~l~~ 175 (281)
...+....+++.+ |.|||||||.|||||+||+|++. .... ... .....++|+++++
T Consensus 230 ~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~-~v~~~~~~~~~~~~~~~~~~dv~lSy 308 (691)
T KOG1256|consen 230 EVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVS-DVAGIFFLSAAENAKATVGDDVYLSY 308 (691)
T ss_pred EEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceee-hhhhhhhhhhcccccccccCceEEEe
Confidence 1111234457888 99999999999999999999998 4332 111 1122347999999
Q ss_pred CchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcc
Q psy9113 176 ADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNT 246 (281)
Q Consensus 176 ~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~ 246 (281)
+|+.|++..+.. ...++.|+.+.+. ..|+..+.+.+++.+||.+. +.|-++.++.+.+..
T Consensus 309 LPLAHi~er~~~-~~~~~~G~~IgF~-------~gD~~~l~~dlk~lkPT~f~---~VPRVl~riye~I~~ 368 (691)
T KOG1256|consen 309 LPLAHIFERVVE-LYTFYIGAKIGFA-------RGDILKLTDDLKELKPTVFP---GVPRVLERIYEGIQK 368 (691)
T ss_pred CcHHHHHHHHHH-HhHhhcccEEEEe-------cCChHHHHHHHHHhCCcEEe---ccHhHHHHHHHHHHH
Confidence 999999998755 5556899999999 57889999999999999966 555556666666543
No 50
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.96 E-value=3e-29 Score=230.76 Aligned_cols=205 Identities=21% Similarity=0.174 Sum_probs=174.3
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
|++.+.|.+.++.+||++|+++ .++.+||+||.+++.++|+.|.+.|. +|++|+++++|+++++++++||+++|+
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~ 75 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKE----NDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGW 75 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEec----CCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCe
Confidence 4688899999999999999985 46799999999999999999999884 799999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC-------------------cC--------C---------------Cchhhhcccc-eeeeecCC
Q psy9113 103 VHSIVVSKCSGDDMST-------------------VP--------A---------------NSERERKLKL-RKVVTGST 139 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~-------------------~~--------~---------------~~~~~~~~~~-i~~TSGTT 139 (281)
+++|+++..+.+++.+ +. . ......++++ ++||||||
T Consensus 76 ~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtT 155 (487)
T PRK07638 76 TCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEIDEWKRMIEKYLPTYAPIENVQNAPFYMGFTSGST 155 (487)
T ss_pred EEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEehhhhhhhhhccccccccccCCCCcEEEEeCCCCC
Confidence 9999999988776655 00 0 0001124567 99999999
Q ss_pred CCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceee
Q psy9113 140 GKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITG 219 (281)
Q Consensus 140 G~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i 219 (281)
|.||+|+++|+++.. ........+++.++|+++...|++|..++ ..++.++..|+++++. + .+++..+++.+
T Consensus 156 G~PKgv~~s~~~~~~-~~~~~~~~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~--~----~~~~~~~~~~i 227 (487)
T PRK07638 156 GKPKAFLRAQQSWLH-SFDCNVHDFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLM--R----KFIPNQVLDKL 227 (487)
T ss_pred CCCcEEEEecHHHHH-HHHHHHHhcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEc--C----CCCHHHHHHHH
Confidence 999999999999988 66677777888999999999999998876 5789999999999998 5 67899999999
Q ss_pred eeeccceeccCCchhHHHHHHHHh
Q psy9113 220 HTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 220 ~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
+++++|++. .+|.++..+.+.
T Consensus 228 ~~~~~t~~~---~~P~~~~~l~~~ 248 (487)
T PRK07638 228 ETENISVMY---TVPTMLESLYKE 248 (487)
T ss_pred HHcCCeEEE---eCcHHHHHHHhC
Confidence 999999976 555555665554
No 51
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=2.4e-29 Score=235.81 Aligned_cols=228 Identities=19% Similarity=0.118 Sum_probs=182.7
Q ss_pred cccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 21 QTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 21 ~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
..+|+.+.+++.++.+||++|+.+ .++.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++
T Consensus 30 ~~~~l~~~~~~~~~~~p~~~a~~~----~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~ 105 (573)
T PRK05605 30 GDTTLVDLYDNAVARFGDRPALDF----FGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRL 105 (573)
T ss_pred CcCCHHHHHHHHHHHCCCCeEEEe----CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 346899999999999999999986 3568999999999999999999999999999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC----------c----------------CC---------------------------------
Q psy9113 101 GAVHSIVVSKCSGDDMST----------V----------------PA--------------------------------- 121 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~----------~----------------~~--------------------------------- 121 (281)
|++++|+++.++.+++.+ + ..
T Consensus 106 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
T PRK05605 106 GAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAA 185 (573)
T ss_pred CcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeecccccccccccccccccccccccccc
Confidence 999999999887776555 0 00
Q ss_pred ---------------------------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhc-cC-CCCCE
Q psy9113 122 ---------------------------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVF-DY-KPGDI 171 (281)
Q Consensus 122 ---------------------------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~-~~~~~ 171 (281)
......++++ ++|||||||.||+|.++|+++.. ......... ++ ..+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~ 264 (573)
T PRK05605 186 LTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFA-NAAQGKAWVPGLGDGPER 264 (573)
T ss_pred cccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHH-HHHHHHhhccccCCCCcE
Confidence 0001124677 99999999999999999999887 444333222 22 34789
Q ss_pred EEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccc
Q psy9113 172 YWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCI 251 (281)
Q Consensus 172 ~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~ 251 (281)
++...|++|.+|+...++.++..|+++++. + ..+++.+++.++++++|.+. .+|.++..+++.... .
T Consensus 265 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~--~----~~~~~~~~~~l~~~~~t~~~---~~P~~~~~l~~~~~~----~ 331 (573)
T PRK05605 265 VLAALPMFHAYGLTLCLTLAVSIGGELVLL--P----APDIDLILDAMKKHPPTWLP---GVPPLYEKIAEAAEE----R 331 (573)
T ss_pred EEEecChHHHHHHHHHHHHHHHcCCEEEEe--C----CCCHHHHHHHHHHhCCEEEE---chHHHHHHHHhCccc----c
Confidence 999999999999877888899999999998 4 56899999999999999977 666677777765443 2
Q ss_pred cccchhhhhccCCCc
Q psy9113 252 LYTISSLMWAGSLDI 266 (281)
Q Consensus 252 ~~~L~sl~~~g~~g~ 266 (281)
..++++++.+...|.
T Consensus 332 ~~~~~~lr~i~~gg~ 346 (573)
T PRK05605 332 GVDLSGVRNAFSGAM 346 (573)
T ss_pred CCCchhccEEEECCC
Confidence 234555655544443
No 52
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.96 E-value=2.4e-29 Score=232.95 Aligned_cols=211 Identities=22% Similarity=0.164 Sum_probs=179.4
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..|+.++|.+.++++||++|+++ .++.+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G 85 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVF----GDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAG 85 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEE----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 45799999999999999999985 45899999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC-------------------cC----------------------------------------CC
Q psy9113 102 AVHSIVVSKCSGDDMST-------------------VP----------------------------------------AN 122 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~-------------------~~----------------------------------------~~ 122 (281)
++++|+++..+.+++.. .. ..
T Consensus 86 ~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (523)
T PRK08316 86 AVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAGSVAEPD 165 (523)
T ss_pred cEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcCCCccCc
Confidence 99999999887766644 00 00
Q ss_pred chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEe
Q psy9113 123 SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIV 201 (281)
Q Consensus 123 ~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~ 201 (281)
.....++++ ++|||||||.||+|.++|+++.. .........+++++++++..+|++|..|+...++.++..|+++++.
T Consensus 166 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~ 244 (523)
T PRK08316 166 VELADDDLAQILYTSGTESLPKGAMLTHRALIA-EYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVIL 244 (523)
T ss_pred cCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHH-HHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEe
Confidence 011224667 99999999999999999999988 5555566678899999999999999999876677789999999999
Q ss_pred cCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcc
Q psy9113 202 SLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNT 246 (281)
Q Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~ 246 (281)
+ ..+++.+++.++++++|.++ .+|.++..+++....
T Consensus 245 --~----~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~~~ 280 (523)
T PRK08316 245 --D----APDPELILRTIEAERITSFF---APPTVWISLLRHPDF 280 (523)
T ss_pred --c----CCCHHHHHHHHHHhCCeEEE---eCHHHHHHHHcCccc
Confidence 5 56899999999999999977 566666676665543
No 53
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.96 E-value=9.9e-29 Score=236.19 Aligned_cols=214 Identities=18% Similarity=0.125 Sum_probs=166.0
Q ss_pred cchhhhhccCCCCCCCCCccccC-----------C--------CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGN-----------D--------PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIY 83 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~-----------~--------~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~ 83 (281)
.|+.+++++.++.+||++|+... + .+..+.+||+|+.++++++|+.|.++|+++||+|+++
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 48999999999999999999321 0 1223569999999999999999999999999999999
Q ss_pred eCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC--------------------------cC---------C-C-----
Q psy9113 84 LPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST--------------------------VP---------A-N----- 122 (281)
Q Consensus 84 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~--------------------------~~---------~-~----- 122 (281)
++|+++|+++++||+++|+++||+++.++.+++.+ .+ . .
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~ 217 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDS 217 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhh
Confidence 99999999999999999999999999999887766 00 0 0
Q ss_pred ---------------------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhh-ccCCCCCEEE
Q psy9113 123 ---------------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYV-FDYKPGDIYW 173 (281)
Q Consensus 123 ---------------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~l 173 (281)
.....++++ |+|||||||.||||++||+++.. ........ .++.++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~-~~~~~~~~~~~~~~~d~~l 296 (696)
T PLN02387 218 SLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVA-TVAGVMTVVPKLGKNDVYL 296 (696)
T ss_pred hhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHH-HHHHHHhhcCCCCCCCEEE
Confidence 001236778 99999999999999999999988 55544433 3578899999
Q ss_pred EeCchhhhhhHhHHHHhhhccCceEEEecCCCccc--c--ccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 174 CTADVGWITGHTYVVYGPLANGATSVIVSLPGEIY--W--CTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 174 ~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~--~--~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
+.+|++|++++.. .+.++..|+++.+. ..... . .-+..+++.++++++|.++ .+|.++..+.+.
T Consensus 297 ~~lPl~Hi~~~~~-~~~~~~~g~~i~~g--~~~~l~~~~~~~~~~~~~~i~~~~pT~~~---~vP~~l~~l~~~ 364 (696)
T PLN02387 297 AYLPLAHILELAA-ESVMAAVGAAIGYG--SPLTLTDTSNKIKKGTKGDASALKPTLMT---AVPAILDRVRDG 364 (696)
T ss_pred EECcHHHHHHHHH-HHHHHHhCCEEEEC--ChhhhcccccccccCchhhHHHhCCcEEE---ehhHHHHHHHHH
Confidence 9999999999854 35556677776654 21000 0 1134567789999999976 555666666543
No 54
>PRK12467 peptide synthase; Provisional
Probab=99.96 E-value=1.4e-29 Score=275.62 Aligned_cols=231 Identities=15% Similarity=0.123 Sum_probs=194.9
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++.+++++.++++||++|+++ .++.+||+||.++++++|+.|.++|+++|++|+++++|+++++++++||+++|
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~----~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aG 3169 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVF----GDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAG 3169 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEee----CCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhC
Confidence 35899999999999999999995 56789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC-------------------cC----------------------CCchhhhcccc-eeeeecCC
Q psy9113 102 AVHSIVVSKCSGDDMST-------------------VP----------------------ANSERERKLKL-RKVVTGST 139 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~-------------------~~----------------------~~~~~~~~~~~-i~~TSGTT 139 (281)
++++|++|.++.+++.+ .+ ......+++++ ++||||||
T Consensus 3170 a~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGST 3249 (3956)
T PRK12467 3170 GAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDLNGYSENNPSTRVMGENLAYVIYTSGST 3249 (3956)
T ss_pred cEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhhcccCCCCCcccCCCCceEEEEEccCCC
Confidence 99999999999887766 00 00012236778 99999999
Q ss_pred CCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceee
Q psy9113 140 GKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITG 219 (281)
Q Consensus 140 G~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i 219 (281)
|+||||+++|+++.+ ........+++.++|+++...|++|..+. ..++.+|..|+++++. ++ ..++++.+++.+
T Consensus 3250 G~PKgV~~~h~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~l~i~--~~--~~~~~~~l~~~i 3323 (3956)
T PRK12467 3250 GKPKGVGVRHGALAN-HLCWIAEAYELDANDRVLLFMSFSFDGAQ-ERFLWTLICGGCLVVR--DN--DLWDPEELWQAI 3323 (3956)
T ss_pred CCcceeeehhHHHHH-HHHHHHHhcCCCcCCEEEEecCccHhHHH-HHHHHHHhCCCEEEEC--Cc--ccCCHHHHHHHH
Confidence 999999999999999 78888888899999999999999999886 6889999999999998 41 257899999999
Q ss_pred eeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcce
Q psy9113 220 HTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIRM 268 (281)
Q Consensus 220 ~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~~ 268 (281)
+++++|++. .+|.++..+++..... ...+|+.+..+|+.-...
T Consensus 3324 ~~~~vt~~~---~~Ps~l~~l~~~~~~~---~~~~lr~~~~gGe~~~~~ 3366 (3956)
T PRK12467 3324 HAHRISIAC---FPPAYLQQFAEDAGGA---DCASLDIYVFGGEAVPPA 3366 (3956)
T ss_pred HHcCCEEEE---cCHHHHHHHHhccccc---CCCCceEEEEecCCCCHH
Confidence 999999977 6666666666543221 334567777777765443
No 55
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.96 E-value=2.6e-29 Score=233.39 Aligned_cols=230 Identities=12% Similarity=0.033 Sum_probs=172.5
Q ss_pred hhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeE
Q psy9113 25 GGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVH 104 (281)
Q Consensus 25 l~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~ 104 (281)
+.+.|++.++.+|+++|+++.+....+++||+||.++++++|+.|.++ ++|++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 788899999999999999986555568999999999999999999987 799999999999999999999999999986
Q ss_pred EEeecCCCCC-------C----cCC----------------------c---CC--------C---chhhhcccc-eeeee
Q psy9113 105 SIVVSKCSGD-------D----MST----------------------V---PA--------N---SERERKLKL-RKVVT 136 (281)
Q Consensus 105 v~l~~~~~~~-------~----~~~----------------------~---~~--------~---~~~~~~~~~-i~~TS 136 (281)
++.+...... + +.. + .. . .....++++ ++|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TS 161 (525)
T PRK05851 82 SILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSVTVHDLATAAHTNRSASLTPPDSGGPAVLQGTA 161 (525)
T ss_pred cCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcccccccccccccccccccCCCCCCCCeEEEEeCC
Confidence 5432111100 0 000 0 00 0 011235778 99999
Q ss_pred cCCCCCceEEEechhHHHHHHHhhhhhccCC-CCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCcccccccccc
Q psy9113 137 GSTGKPKGVLHTTGGYLLYAATTHKYVFDYK-PGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVG 215 (281)
Q Consensus 137 GTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~ 215 (281)
||||.||||+++|+++.. ........+++. ++|+++..+|++|.+|+. .++.++..|+++++. +...+..++..+
T Consensus 162 GTTG~PKgV~~th~~~~~-~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~~~~~~--~~~~~~~~~~~~ 237 (525)
T PRK05851 162 GSTGTPRTAILSPGAVLS-NLRGLNARVGLDAATDVGCSWLPLYHDMGLA-FLLTAALAGAPLWLA--PTTAFSASPFRW 237 (525)
T ss_pred CCCCCCcEEEecHHHHHH-HHHHHHHHhCCCCCCCeEEEcCCCccCccHH-HHHHHHHcCCeEEEc--CHHHHHHCHHHH
Confidence 999999999999999998 777777778887 899999999999999985 678999999999998 421223367889
Q ss_pred ceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 216 WITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 216 ~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
++.++++++|.+. +|+.++.. +.+..... ...++++++.+...|.
T Consensus 238 ~~~i~~~~~t~~~---~p~~~~~~-l~~~~~~~--~~~~l~~lr~~~~gG~ 282 (525)
T PRK05851 238 LSWLSDSRATLTA---APNFAYNL-IGKYARRV--SDVDLGALRVALNGGE 282 (525)
T ss_pred HHHHHHhCCeEEe---CCcHHHHH-HHHhhccc--cCCCHHHhheeEeccc
Confidence 9999999999864 56555433 32221111 2234556655544444
No 56
>PRK08315 AMP-binding domain protein; Validated
Probab=99.96 E-value=4.5e-29 Score=233.25 Aligned_cols=215 Identities=21% Similarity=0.187 Sum_probs=179.5
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
-.+.|+.++|.+.++++||++|+++. +.++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||++
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~~ai~~~--~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~ 90 (559)
T PRK08315 13 LLEQTIGQLLDRTAARYPDREALVYR--DQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAK 90 (559)
T ss_pred hhhccHHHHHHHHHHHCCCCeEEEEc--CCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 34458999999999999999999864 3567899999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEeecCCCCCCcCC----------------c----------------------------C---------C-----
Q psy9113 100 IGAVHSIVVSKCSGDDMST----------------V----------------------------P---------A----- 121 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~----------------~----------------------------~---------~----- 121 (281)
+|++++|+++..+.+++.. . + .
T Consensus 91 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (559)
T PRK08315 91 IGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPG 170 (559)
T ss_pred hCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCcc
Confidence 9999999999876544422 0 0 0
Q ss_pred ----------------------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCch
Q psy9113 122 ----------------------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADV 178 (281)
Q Consensus 122 ----------------------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl 178 (281)
......++++ ++|||||||.||+|.++|+++.. ........+++.++|+++...|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~~~~~p~ 249 (559)
T PRK08315 171 MLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILN-NGYFIGEAMKLTEEDRLCIPVPL 249 (559)
T ss_pred cccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHH-HHHHHHHhcCCCCCceEEEecCc
Confidence 0011235667 99999999999999999999987 77777777889999999999999
Q ss_pred hhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhc
Q psy9113 179 GWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLN 245 (281)
Q Consensus 179 ~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~ 245 (281)
+|..|+...++.++..|+++++. . ..+++..+++.++++++|.++ .+|.++..++....
T Consensus 250 ~~~~g~~~~~~~~l~~g~~~~~~--~---~~~~~~~~~~~l~~~~~t~~~---~~P~~~~~~~~~~~ 308 (559)
T PRK08315 250 YHCFGMVLGNLACVTHGATMVYP--G---EGFDPLATLAAVEEERCTALY---GVPTMFIAELDHPD 308 (559)
T ss_pred HHHHHHHHHHHHHHhccceEEEe--c---CCCCHHHHHHHHHHcCCeEEe---cchHHHHHHHhCcc
Confidence 99999988899999999999966 3 257899999999999999966 55555555555443
No 57
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.96 E-value=3.2e-29 Score=233.30 Aligned_cols=214 Identities=18% Similarity=0.209 Sum_probs=176.0
Q ss_pred ceeccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHH
Q psy9113 15 IVDTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTM 94 (281)
Q Consensus 15 ~~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~ 94 (281)
-.++.|.+.++.+++++.++ ||++|+++ .++.+||+||.+++.++|+.|.+.|+++|++|+++++|++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~a~--p~~~a~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~ 90 (536)
T PRK10946 17 REKGYWQDLPLTDILTRHAA--SDAIAVIC----GERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITF 90 (536)
T ss_pred eecceecCccHHHHHHHhhC--CCCeEEEe----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHH
Confidence 45789999999999999887 99999995 5688999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeEEEeecCCCCCCcCC---------------------------------------cC---------------
Q psy9113 95 LACARIGAVHSIVVSKCSGDDMST---------------------------------------VP--------------- 120 (281)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~~~~---------------------------------------~~--------------- 120 (281)
+||+++|++++++.+.....++.. ..
T Consensus 91 la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (536)
T PRK10946 91 FALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDAINHP 170 (536)
T ss_pred HHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHHhhCc
Confidence 999999998776555433322210 00
Q ss_pred ---C-Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhH-HHHhhhcc
Q psy9113 121 ---A-NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTY-VVYGPLAN 194 (281)
Q Consensus 121 ---~-~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~-~~~~~l~~ 194 (281)
. ......++++ ++|||||||.||+|+++|+++.. ........+++.+++++++.+|++|.+++.. .++.++..
T Consensus 171 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~-~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~ 249 (536)
T PRK10946 171 AEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYY-SVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLA 249 (536)
T ss_pred ccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHH-HHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhc
Confidence 0 0111235677 99999999999999999999998 7777777788999999999999999888653 57888999
Q ss_pred CceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 195 GATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 195 G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
|+++++. + .+++..+++.++++++|++. .+|.++..+++..
T Consensus 250 g~~~~~~--~----~~~~~~~~~~l~~~~~t~~~---~~p~~~~~l~~~~ 290 (536)
T PRK10946 250 GGTVVLA--P----DPSATLCFPLIEKHQVNVTA---LVPPAVSLWLQAI 290 (536)
T ss_pred CcEEEEC--C----CCCHHHHHHHHHHhCCcEEE---eChHHHHHHHhhh
Confidence 9999988 4 56888899999999999976 4455555666553
No 58
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.96 E-value=9.1e-29 Score=235.14 Aligned_cols=210 Identities=16% Similarity=0.112 Sum_probs=169.7
Q ss_pred cccchhhhhccCCCCCCCCCccccCC---C--CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHH
Q psy9113 21 QTETGGHVLTPLPGCTPMKPGAAGND---P--DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTML 95 (281)
Q Consensus 21 ~~~tl~~~l~~~a~~~pd~~a~~~~~---~--~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~l 95 (281)
...|+.+++.+.++++|+++|+.+.. . +..+.+||+|+.++++++|..|.+.|+++||+|+++++|+++|+++++
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 34599999999999999999986421 1 123568999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeEEEeecCCCCCCcCC--------------------c----C-C------------C----------------
Q psy9113 96 ACARIGAVHSIVVSKCSGDDMST--------------------V----P-A------------N---------------- 122 (281)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~~~~--------------------~----~-~------------~---------------- 122 (281)
||+++|+++||+++.++.+++.+ + + . .
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 199 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYS 199 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEE
Confidence 99999999999999998887776 0 0 0 0
Q ss_pred ---------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhh-----ccCCCCCEEEEeCchhhh
Q psy9113 123 ---------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYV-----FDYKPGDIYWCTADVGWI 181 (281)
Q Consensus 123 ---------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~l~~~pl~h~ 181 (281)
....+++++ ++|||||||.||||++||+++.. ........ .++.++|++++.+|++|.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~-~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~ 278 (660)
T PLN02430 200 WIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVAT-FVRGVDLFMEQFEDKMTHDDVYLSFLPLAHI 278 (660)
T ss_pred HHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHH-HHHHHHhhccccccCCCCCCEEEEeCcHHHH
Confidence 000135677 99999999999999999999987 54433221 246788999999999999
Q ss_pred hhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 182 TGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 182 ~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
++... .+.++..|+++++. ..++..+++.++++++|++. .+|.++..+.+
T Consensus 279 ~~~~~-~~~~l~~G~~i~~~-------~~~~~~l~~~l~~~~pt~~~---~vP~~~~~l~~ 328 (660)
T PLN02430 279 LDRMI-EEYFFRKGASVGYY-------HGDLNALRDDLMELKPTLLA---GVPRVFERIHE 328 (660)
T ss_pred HHHHH-HHHHHHcCCEEEEe-------CCChhhHHHHHHHhCCcEEE---ecHHHHHHHHH
Confidence 99865 45678999999887 34778899999999999966 44455555554
No 59
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=4.1e-29 Score=233.38 Aligned_cols=212 Identities=20% Similarity=0.176 Sum_probs=176.1
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..|+.++|.+.++++|+++|+++. +.++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 17 ~~~l~~~l~~~~~~~p~~~a~~~~--~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G 94 (558)
T PRK12583 17 TQTIGDAFDATVARFPDREALVVR--HQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIG 94 (558)
T ss_pred cCcHHHHHHHHHHHCCCCeEEEec--CCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhC
Confidence 357999999999999999999863 345789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC------------cC-------------------------------------------------
Q psy9113 102 AVHSIVVSKCSGDDMST------------VP------------------------------------------------- 120 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~------------~~------------------------------------------------- 120 (281)
++++++++..+.+++.+ .+
T Consensus 95 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (558)
T PRK12583 95 AILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGFL 174 (558)
T ss_pred CEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCcccc
Confidence 99999999877654333 00
Q ss_pred -CC------------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhh
Q psy9113 121 -AN------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGW 180 (281)
Q Consensus 121 -~~------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h 180 (281)
+. .....++++ ++|||||||.||+|.++|+++.. ........+++.++|+++..+|++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~~~~~p~~~ 253 (558)
T PRK12583 175 AWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILN-NGYFVAESLGLTEHDRLCVPVPLYH 253 (558)
T ss_pred chHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHH-HHHHHHHHhCCCCCCeEEEecCchh
Confidence 00 001124567 99999999999999999999987 6766667788889999999999999
Q ss_pred hhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 181 ITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 181 ~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
.+|....++.++..|+++++. . ...++..+++.++++++|+++ ..|.++..++...
T Consensus 254 ~~g~~~~~~~~l~~g~~v~~~--~---~~~~~~~~~~~i~~~~~t~l~---~~P~~~~~l~~~~ 309 (558)
T PRK12583 254 CFGMVLANLGCMTVGACLVYP--N---EAFDPLATLQAVEEERCTALY---GVPTMFIAELDHP 309 (558)
T ss_pred hhhHHHHHHHHHhcCceEEee--c---CCCCHHHHHHHHHHcCCeEEe---ccHHHHHHHHccc
Confidence 999988999999999999876 3 256889999999999999965 4444444445433
No 60
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.96 E-value=2.2e-29 Score=241.80 Aligned_cols=207 Identities=17% Similarity=0.202 Sum_probs=171.2
Q ss_pred ccchhhhhccCCCCCCC-CCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 22 TETGGHVLTPLPGCTPM-KPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd-~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
..|+.+.+.+.++++|+ ++|+.+ .+++.+||+|+.++++++|+.|.+. +++||+|+++++|+++++++++||+++
T Consensus 203 ~~t~~~~l~~~~~~~p~~~~a~~~---~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~ 278 (718)
T PRK08043 203 RETLYEALLSAQYRYGAGKPCIED---VNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLR 278 (718)
T ss_pred CCCHHHHHHHHHHHhCCCCcceEc---CCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHc
Confidence 45889999999999998 577763 2347899999999999999999887 589999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC----------------cC------CC------------c-----------------------
Q psy9113 101 GAVHSIVVSKCSGDDMST----------------VP------AN------------S----------------------- 123 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~----------------~~------~~------------~----------------------- 123 (281)
|++++|+++.++.+++.+ .. .. .
T Consensus 279 G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (718)
T PRK08043 279 RRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADKLWIFAHLLMPRLA 358 (718)
T ss_pred CCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHHHHHHHHHhCCccc
Confidence 999999999998777766 00 00 0
Q ss_pred --hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEE
Q psy9113 124 --ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVI 200 (281)
Q Consensus 124 --~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~ 200 (281)
....++++ ++|||||||.||||+++|+++.. ........+++.++|++++.+|++|.+|+...++.++..|+++++
T Consensus 359 ~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 359 QVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLA-NVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred cCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHH-HHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 01125677 99999999999999999999988 666666677889999999999999999987788999999999999
Q ss_pred ecCCCccccccccccceeeeeeccceeccCCchhHHHHHHH
Q psy9113 201 VSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETL 241 (281)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll 241 (281)
. +. .+++..+++.++++++|.++ ..|.++..+.
T Consensus 438 ~--~~---~~~~~~~~~~i~~~~vt~~~---~~p~~~~~l~ 470 (718)
T PRK08043 438 Y--PS---PLHYRIVPELVYDRNCTVLF---GTSTFLGNYA 470 (718)
T ss_pred e--CC---cccHHHHHHHHHhcCCeEEE---chHHHHHHhh
Confidence 8 42 34667788999999999966 3444444443
No 61
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=4.8e-29 Score=230.63 Aligned_cols=231 Identities=23% Similarity=0.219 Sum_probs=187.5
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
|.+.|+.++|.+.++.+|+++|+.+ .++.+||+||++++.++|+.|.+.|+++|++|+++++|+.+++++++||++
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~----~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~ 78 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYF----DGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPK 78 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEe----CCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 5677999999999999999999995 456699999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEeecCCCCCCcCC--------------------------cCC--------------------------------
Q psy9113 100 IGAVHSIVVSKCSGDDMST--------------------------VPA-------------------------------- 121 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~--------------------------~~~-------------------------------- 121 (281)
+|++++++++..+.+++.. .+.
T Consensus 79 ~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (521)
T PRK06187 79 IGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASDT 158 (521)
T ss_pred cCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCcc
Confidence 9999999999877665444 000
Q ss_pred --Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceE
Q psy9113 122 --NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATS 198 (281)
Q Consensus 122 --~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~ 198 (281)
......++++ +.|||||||.||+|.++|.++.. ........+++.++++++...|++|.+++... +.++..|+++
T Consensus 159 ~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~l~~G~~~ 236 (521)
T PRK06187 159 FDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFL-HSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLP-YLALMAGAKQ 236 (521)
T ss_pred CCCCCCCccceEEEEECCCCCCCCceEEeehHHHHH-HHHHHHHhhCCCCCCEEEEeCCchHHhhHHHH-HHHHHhCCEE
Confidence 0011224677 99999999999999999999888 66666668889999999999999999988644 4599999999
Q ss_pred EEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 199 VIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 199 v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
++. + ..+++.+++.++++++|.++ .+|.++..+++....... ...+++.+..+|+.-.
T Consensus 237 v~~--~----~~~~~~~~~~l~~~~~t~l~---~~p~~~~~l~~~~~~~~~-~~~~l~~v~~~Ge~l~ 294 (521)
T PRK06187 237 VIP--R----RFDPENLLDLIETERVTFFF---AVPTIWQMLLKAPRAYFV-DFSSLRLVIYGGAALP 294 (521)
T ss_pred Eec--C----CCCHHHHHHHHHHhCCeEEE---chHHHHHHHHcCcCCCcc-CcchhhEEEEcCcCCC
Confidence 998 5 35899999999999999977 566667777766654221 3334444445555443
No 62
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.96 E-value=5.5e-29 Score=233.70 Aligned_cols=207 Identities=20% Similarity=0.237 Sum_probs=171.1
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.|+.+++.+.++++||++|+.+ .++++||+||.++++++|+.|.++|+++||+|+++++|+++++++++||+++|+
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~----~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~ 89 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIY----GKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGA 89 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEE----CCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 5789999999999999999985 457899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC--------------------------cC---------C---C-------c--------------
Q psy9113 103 VHSIVVSKCSGDDMST--------------------------VP---------A---N-------S-------------- 123 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~--------------------------~~---------~---~-------~-------------- 123 (281)
+++|+++.++.+++.+ .+ . . .
T Consensus 90 ~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (579)
T PLN03102 90 VLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRG 169 (579)
T ss_pred EEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhcc
Confidence 9999999987777666 00 0 0 0
Q ss_pred ------------hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHh
Q psy9113 124 ------------ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYG 190 (281)
Q Consensus 124 ------------~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~ 190 (281)
....++++ ++|||||||.||+|+++|+++.. ..........+...++++..+|++|..|+. ..+.
T Consensus 170 ~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~-~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~-~~~~ 247 (579)
T PLN03102 170 EPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYL-STLSAIIGWEMGTCPVYLWTLPMFHCNGWT-FTWG 247 (579)
T ss_pred CCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHH-HHHHHHhhcCCCCCCeEEecCChhhhcchh-HHHH
Confidence 01225677 99999999999999999999765 333333344566778899999999999975 5677
Q ss_pred hhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 191 PLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 191 ~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
++..|+++++. + .++++.+++.++++++|++. .+|.++..+++..
T Consensus 248 ~~~~g~~~v~~--~----~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~ 292 (579)
T PLN03102 248 TAARGGTSVCM--R----HVTAPEIYKNIEMHNVTHMC---CVPTVFNILLKGN 292 (579)
T ss_pred HHHhcCcEEee--c----cCChHHHHHHHHHcCCeEEE---eChHHHHHHHhCc
Confidence 88899999888 4 56788999999999999977 6666666766543
No 63
>PRK12467 peptide synthase; Provisional
Probab=99.96 E-value=3.7e-29 Score=272.27 Aligned_cols=233 Identities=18% Similarity=0.159 Sum_probs=193.3
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++.+++.+.++++||++|+++ .++.+||+||.++++++|+.|.++|+++|++|+++++|+++++++++||+++|
T Consensus 1573 ~~~~~~~~~~~a~~~p~~~Av~~----~~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG 1648 (3956)
T PRK12467 1573 ARLVHQLIEDQAAATPEAVALVF----GEQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAG 1648 (3956)
T ss_pred cccHHHHHHHHHHhCCCCeEEEe----CCcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccC
Confidence 45899999999999999999995 56799999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC-------------------cCC------------------------Cchhhhcccc-eeeeec
Q psy9113 102 AVHSIVVSKCSGDDMST-------------------VPA------------------------NSERERKLKL-RKVVTG 137 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~-------------------~~~------------------------~~~~~~~~~~-i~~TSG 137 (281)
++++|++|.++.+++.+ .+. ......++++ ++||||
T Consensus 1649 ~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ayiiyTSG 1728 (3956)
T PRK12467 1649 GAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQEDDWLEGYSDSNPAVNLAPQNLAYVIYTSG 1728 (3956)
T ss_pred ceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEeccccchhccCCCCCCCCCCCCcCcEEEEECCC
Confidence 99999999998887666 000 0011235678 999999
Q ss_pred CCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccce
Q psy9113 138 STGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWI 217 (281)
Q Consensus 138 TTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~ 217 (281)
|||+||||+++|+++.+ ........+++.++|+++...|++|..++ ..++.+|..|+++++. +.. ...+++.+++
T Consensus 1729 STG~PKGV~~th~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi~--~~~-~~~~~~~l~~ 1803 (3956)
T PRK12467 1729 STGRPKGAGNRHGALVN-RLCATQEAYQLSAADVVLQFTSFAFDVSV-WELFWPLINGARLVIA--PPG-AHRDPEQLIQ 1803 (3956)
T ss_pred cCCCCCEEEEcCHHHHH-HHHHHHHhcCCCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEEc--Chh-hcCCHHHHHH
Confidence 99999999999999998 77777778899999999999999999986 5889999999999998 422 2468999999
Q ss_pred eeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcce
Q psy9113 218 TGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIRM 268 (281)
Q Consensus 218 ~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~~ 268 (281)
.++++++|++. .+|.++..+++..... ....+|+.+..+|+.-...
T Consensus 1804 ~i~~~~vt~~~---~~Ps~~~~l~~~~~~~--~~~~~lr~v~~gGe~l~~~ 1849 (3956)
T PRK12467 1804 LIERQQVTTLH---FVPSMLQQLLQMDEQV--EHPLSLRRVVCGGEALEVE 1849 (3956)
T ss_pred HHHHcCCeEEE---CCHHHHHHHHhhcccc--ccCCCceEEEEccccCCHH
Confidence 99999999987 6666666666532211 1334566666677765543
No 64
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=2.1e-28 Score=234.23 Aligned_cols=208 Identities=18% Similarity=0.118 Sum_probs=164.3
Q ss_pred cccchhhhhccCCCCCCCCCccccCC-------------C----------CCCeeeeHHHHHHHHHHHHHHHHHCCCCCC
Q psy9113 21 QTETGGHVLTPLPGCTPMKPGAAGND-------------P----------DDYSRLTYKKLLEEVCKCANVLKSKGVQKG 77 (281)
Q Consensus 21 ~~~tl~~~l~~~a~~~pd~~a~~~~~-------------~----------~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g 77 (281)
+..|+.++|.+.++++||++|+.+.+ + +.++.+||+|+.++++++|+.|.++|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 45699999999999999999998631 1 146899999999999999999999999999
Q ss_pred CEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC-----------------------c---CCC---------
Q psy9113 78 DRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST-----------------------V---PAN--------- 122 (281)
Q Consensus 78 ~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~-----------------------~---~~~--------- 122 (281)
|+|+++++|+++|+++++||+++|++++|+++.++.+++.+ . ..+
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~ 226 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDS 226 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECC
Confidence 99999999999999999999999999999999988877666 0 000
Q ss_pred --------------------------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhc-----
Q psy9113 123 --------------------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVF----- 164 (281)
Q Consensus 123 --------------------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~----- 164 (281)
.....++++ ++|||||||.||||++||+++.+ ........+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~-~~~~~~~~~~~~~~ 305 (700)
T PTZ00216 227 LPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTA-GILALEDRLNDLIG 305 (700)
T ss_pred CccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHH-HHHHHHhhcccccC
Confidence 001235677 99999999999999999999988 555443322
Q ss_pred cCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccc-------eeeeeeccceeccCCchhHHH
Q psy9113 165 DYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGW-------ITGHTYVVYGPLANGATSVIV 237 (281)
Q Consensus 165 ~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~-------~~i~~~~vt~~~~~~~~~~~~ 237 (281)
...++|++++++|++|++++. .....+..|+++.+. ++..+. ..++++++|.+. .+|.++
T Consensus 306 ~~~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---------~~~~l~~~~~~~~~~l~~~~pT~~~---~vP~~~ 372 (700)
T PTZ00216 306 PPEEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---------SPRTLTDTFARPHGDLTEFRPVFLI---GVPRIF 372 (700)
T ss_pred CCCCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---------CHHHhhhhhccccchHHHcCCcEEE---echHHH
Confidence 236789999999999999975 445667788877664 222332 368899999976 455555
Q ss_pred HHHHH
Q psy9113 238 SETLK 242 (281)
Q Consensus 238 ~~ll~ 242 (281)
..+.+
T Consensus 373 ~~l~~ 377 (700)
T PTZ00216 373 DTIKK 377 (700)
T ss_pred HHHHH
Confidence 65554
No 65
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=1.4e-28 Score=229.16 Aligned_cols=206 Identities=16% Similarity=0.074 Sum_probs=172.5
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCC-CCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGV-QKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~-~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
+.|+.++|.+.+ .|+++|+++ .+..+||+||.+++.++|..|.+.|+ ++|++|+++++|+++++++++||+++
T Consensus 2 ~~~~~~~l~~~~--~p~~~Al~~----~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~ 75 (540)
T PRK13388 2 RDTIAQLLRDRA--GDDTIAVRY----GDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALG 75 (540)
T ss_pred chhHHHHHHhhc--cCCceEEEE----CCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhC
Confidence 347888888765 699999985 45799999999999999999999999 79999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC----------------------cCC--------C-----------------chhhhcccc-e
Q psy9113 101 GAVHSIVVSKCSGDDMST----------------------VPA--------N-----------------SERERKLKL-R 132 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~----------------------~~~--------~-----------------~~~~~~~~~-i 132 (281)
|++++|++|.++.+++.+ ... . .....++++ +
T Consensus 76 Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 155 (540)
T PRK13388 76 GYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAAAGALTPHREVDAMDPFML 155 (540)
T ss_pred CCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhccccCcCCCCCCCCCCeEEE
Confidence 999999999988876655 000 0 011236778 9
Q ss_pred eeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccc
Q psy9113 133 KVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTA 212 (281)
Q Consensus 133 ~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~ 212 (281)
+|||||||.||||.++|+++.. ........+++.++|+++..+|++|.+|+...++.++..|+++++. + .+++
T Consensus 156 ~~TSGTTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~--~----~~~~ 228 (540)
T PRK13388 156 IFTSGTTGAPKAVRCSHGRLAF-AGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALP--A----KFSA 228 (540)
T ss_pred EECCCCCCCCCEEEecHHHHHH-HHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEEC--C----CCCH
Confidence 9999999999999999999987 7777777788999999999999999999876677789999999988 4 5788
Q ss_pred cccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 213 DVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 213 ~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
..+++.++++++|.+. ..+..+..++..
T Consensus 229 ~~~~~~i~~~~vt~~~---~~p~~l~~l~~~ 256 (540)
T PRK13388 229 SGFLDDVRRYGATYFN---YVGKPLAYILAT 256 (540)
T ss_pred HHHHHHHHHhCCeEEE---ehHHHHHHHHhC
Confidence 9999999999999976 344444444443
No 66
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=1.3e-28 Score=229.67 Aligned_cols=235 Identities=19% Similarity=0.083 Sum_probs=183.2
Q ss_pred chhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
++.+.|...++..|+.+++.+. +..+.+||.||+++++++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v 80 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEP--DAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGAS 80 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecC--CCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcc
Confidence 5788888999999999988654 45678999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCcCC--------------------------c-----------CC----------Cchhhhcccc-eeee
Q psy9113 104 HSIVVSKCSGDDMST--------------------------V-----------PA----------NSERERKLKL-RKVV 135 (281)
Q Consensus 104 ~v~l~~~~~~~~~~~--------------------------~-----------~~----------~~~~~~~~~~-i~~T 135 (281)
++++++..+.+++.. . .. ......++++ ++||
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~i~~T 160 (545)
T PRK07768 81 LTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVLTVADLLAADPIDPVETGEDDLALMQLT 160 (545)
T ss_pred ccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCceeehhhhcccCCCCcCCCCCCCEEEEEeC
Confidence 999988776554321 0 00 0011235777 9999
Q ss_pred ecCCCCCceEEEechhHHHHHHHhhhhhccCCCC-CEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccc
Q psy9113 136 TGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPG-DIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADV 214 (281)
Q Consensus 136 SGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~-~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~ 214 (281)
|||||.||+|+++|+++.. .........++.++ |++++.+|++|.+|+...++.++..|+++++. +......++..
T Consensus 161 SGtTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~--~~~~~~~~~~~ 237 (545)
T PRK07768 161 SGSTGSPKAVQITHGNLYA-NAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV--TPMDFLRDPLL 237 (545)
T ss_pred CCCCCCCceEEEcHHHHHH-HHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe--CHHHHHHhHHH
Confidence 9999999999999999988 66666666777776 89999999999999877788899999999988 42222347888
Q ss_pred cceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 215 GWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 215 ~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
+++.+++++++.+. .|+.++..+...+.........++++++.+...|.
T Consensus 238 ~~~~i~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~ 286 (545)
T PRK07768 238 WAELISKYRGTMTA---APNFAYALLARRLRRQAKPGAFDLSSLRFALNGAE 286 (545)
T ss_pred HHHHHHHhCCEEEE---CchHHHHHHHHHHhccccccCCCchheeeEEeccC
Confidence 99999999999965 55555555554442211112355666666555444
No 67
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.96 E-value=1.1e-28 Score=230.93 Aligned_cols=208 Identities=19% Similarity=0.171 Sum_probs=164.8
Q ss_pred chhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKS-KGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
++.+.+... +.+|+++|+++. ..+..+||+||.++++++|+.|++ .|+++||+|+++++|+.+++++++||+++|+
T Consensus 41 ~~~~~l~~~-~~~~~~~a~~~~--~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 117 (560)
T PLN02574 41 DAVSFIFSH-HNHNGDTALIDS--STGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGG 117 (560)
T ss_pred CHHHHHhcC-cccCCCCEEEEC--CCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCe
Confidence 333344433 568999999863 234579999999999999999999 9999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC-----------------------------cCC--------------------------Cchhhh
Q psy9113 103 VHSIVVSKCSGDDMST-----------------------------VPA--------------------------NSERER 127 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~-----------------------------~~~--------------------------~~~~~~ 127 (281)
+++|++|..+.+++.+ ... ......
T Consensus 118 v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (560)
T PLN02574 118 IVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPENYDFDSKRIEFPKFYELIKEDFDFVPKPVIKQ 197 (560)
T ss_pred EEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCcccccccCccCcccHHHHhhcCCcccccCCCCc
Confidence 9999999988776655 000 000123
Q ss_pred cccc-eeeeecCCCCCceEEEechhHHHHHHHhhhh----hcc-CCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEe
Q psy9113 128 KLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKY----VFD-YKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIV 201 (281)
Q Consensus 128 ~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~----~~~-~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~ 201 (281)
++++ ++|||||||.||||+++|+++.. ....... ... ...+++++..+|++|.+|+...++.++..|+++++.
T Consensus 198 ~~~a~i~~TSGTTG~PKgV~~sh~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 276 (560)
T PLN02574 198 DDVAAIMYSSGTTGASKGVVLTHRNLIA-MVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVM 276 (560)
T ss_pred CCEEEEEcCCCccCCCcEEEEeHHHHHH-HHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEe
Confidence 5677 99999999999999999999887 4443322 122 235678899999999999877788889999999998
Q ss_pred cCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 202 SLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
+ .++++.+++.+++|++|.++ .+|.++..+++..
T Consensus 277 --~----~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~ 310 (560)
T PLN02574 277 --R----RFDASDMVKVIDRFKVTHFP---VVPPILMALTKKA 310 (560)
T ss_pred --c----CCCHHHHHHHHHHcCCeEEe---cCCHHHHHHHhCc
Confidence 4 67899999999999999976 4455556666543
No 68
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=7.7e-29 Score=234.98 Aligned_cols=237 Identities=14% Similarity=-0.033 Sum_probs=173.2
Q ss_pred ccchhhhhccCCCCCCCCCccccCC-----CCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHH
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGND-----PDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLA 96 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~-----~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA 96 (281)
..|+.+.|++.++.+||++|+++.+ .+..+.+||+||.++++++|+.|.+. +++||+|+++++|+++++++++|
T Consensus 20 ~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA 98 (631)
T PRK07769 20 NTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFG 98 (631)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHH
Confidence 3589999999999999999988642 12346899999999999999999987 89999999999999999999999
Q ss_pred HHHhcCeEEEe-ecCCC--CCCcCC--------------------------cC---------C------------Cchhh
Q psy9113 97 CARIGAVHSIV-VSKCS--GDDMST--------------------------VP---------A------------NSERE 126 (281)
Q Consensus 97 ~~~~G~~~v~l-~~~~~--~~~~~~--------------------------~~---------~------------~~~~~ 126 (281)
|+++|++++|+ ++..+ .+++.+ .+ . .....
T Consensus 99 ~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (631)
T PRK07769 99 ALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPDEVGATWVPPEAN 178 (631)
T ss_pred HHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccccccccccccCCCCCC
Confidence 99999999999 34332 122222 00 0 00112
Q ss_pred hcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCC
Q psy9113 127 RKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPG 205 (281)
Q Consensus 127 ~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~ 205 (281)
.++++ |+|||||||.||||+++|+++.. ........+++.++++++..+|++|.+|+. .++.+++.|+++++. +.
T Consensus 179 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~-~~~~~~~~G~~~~~~--~~ 254 (631)
T PRK07769 179 EDTIAYLQYTSGSTRIPAGVQITHLNLPT-NVLQVIDALEGQEGDRGVSWLPFFHDMGLI-TVLLPALLGHYITFM--SP 254 (631)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEcHHHHHH-HHHHHHHHcCCCCcceEEEeCCCcCchhhH-HHHHHHhhCCeEEEE--Ch
Confidence 35778 99999999999999999999988 666666677888899999999999999986 456777889999887 32
Q ss_pred ccccccccccceeeeeecc---ceeccCCchhHHHHHHHHhhcccc-ccccccchhhhhccCCCc
Q psy9113 206 EIYWCTADVGWITGHTYVV---YGPLANGATSVIVSETLKMLNTNF-FCILYTISSLMWAGSLDI 266 (281)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~v---t~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~L~sl~~~g~~g~ 266 (281)
..+..++..+++.++++++ +.+. .+|.. +..++....... .....++++++.+...|.
T Consensus 255 ~~~~~~~~~~~~~i~~~~~~~~~~~~--~~p~~-~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~ 316 (631)
T PRK07769 255 AAFVRRPGRWIRELARKPGGTGGTFS--AAPNF-AFEHAAARGLPKDGEPPLDLSNVKGLLNGSE 316 (631)
T ss_pred HHHHhCHHHHHHHHHhhccccCceEe--eCCch-HHHHHHhhccchhcccCcchhheeeEEeccC
Confidence 1112388999999999886 4533 33433 333333211110 001346667765554444
No 69
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.96 E-value=1.3e-28 Score=227.79 Aligned_cols=204 Identities=22% Similarity=0.220 Sum_probs=172.9
Q ss_pred chhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
++.+.+.+.++++|+++++.+ .++.+||+||.+++.++|+.|++.|+.+|++|+++++|+++++++++||+++|++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~----~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~ 76 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVH----HDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGV 76 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEE----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEE
Confidence 467888999999999999985 4578999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCcCC------------------------cC-------------------------CC-----------c
Q psy9113 104 HSIVVSKCSGDDMST------------------------VP-------------------------AN-----------S 123 (281)
Q Consensus 104 ~v~l~~~~~~~~~~~------------------------~~-------------------------~~-----------~ 123 (281)
++|+++..+.+++.. .. +. .
T Consensus 77 ~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (515)
T TIGR03098 77 FVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGDADPPH 156 (515)
T ss_pred EEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhccccccccC
Confidence 999999877766554 00 00 0
Q ss_pred hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEec
Q psy9113 124 ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVS 202 (281)
Q Consensus 124 ~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~ 202 (281)
....++++ ++|||||||.||+|.+||+++.. ........+++.++|++++.+|++|.+|+. .++.++..|+++++.
T Consensus 157 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~- 233 (515)
T TIGR03098 157 PVIDSDMAAILYTSGSTGRPKGVVLSHRNLVA-GAQSVATYLENRPDDRLLAVLPLSFDYGFN-QLTTAFYVGATVVLH- 233 (515)
T ss_pred CCCcCCeEEEEECCCCCCCCceEEEecHHHHH-HHHHHHHHhCCCcccEEEEECchhhHhHHH-HHHHHHHcCCEEEEc-
Confidence 01124567 99999999999999999999988 666666667888899999999999999985 789999999999988
Q ss_pred CCCccccccccccceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 203 LPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 203 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
+ .++++.+++.++++++|.+. .+|.++..+.+
T Consensus 234 -~----~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~ 265 (515)
T TIGR03098 234 -D----YLLPRDVLKALEKHGITGLA---AVPPLWAQLAQ 265 (515)
T ss_pred -C----CCCHHHHHHHHHHcCCceEe---cChHHHHHHHh
Confidence 5 57899999999999999976 55555566554
No 70
>PRK12316 peptide synthase; Provisional
Probab=99.96 E-value=6.7e-29 Score=274.09 Aligned_cols=232 Identities=17% Similarity=0.147 Sum_probs=194.6
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++++.+.+.++.+||++|+++ .++.+||+||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~----~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aG 2077 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVF----GDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAG 2077 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEc----CCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhc
Confidence 34799999999999999999995 56789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC-------------------cC---------C--------------Cchhhhcccc-eeeeecC
Q psy9113 102 AVHSIVVSKCSGDDMST-------------------VP---------A--------------NSERERKLKL-RKVVTGS 138 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~-------------------~~---------~--------------~~~~~~~~~~-i~~TSGT 138 (281)
++++|++|.++.+++.+ .+ . .....+++++ ++|||||
T Consensus 2078 a~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGS 2157 (5163)
T PRK12316 2078 GAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRDAEWADYPDTAPAVQLAGENLAYVIYTSGS 2157 (5163)
T ss_pred eEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccchhhhhccCccCCCCCCCCCCeEEEEeCccC
Confidence 99999999998877766 00 0 0012336778 9999999
Q ss_pred CCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCcccccccccccee
Q psy9113 139 TGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWIT 218 (281)
Q Consensus 139 TG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~ 218 (281)
||+||||+++|+++.+ ........+++.++++++...|++|..++ ..++.+|..|+++++. +. ..++++.+++.
T Consensus 2158 TG~PKgV~~~h~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~~~~~--~~--~~~~~~~~~~~ 2231 (5163)
T PRK12316 2158 TGLPKGVAVSHGALVA-HCQAAGERYELSPADCELQFMSFSFDGAH-EQWFHPLLNGARVLIR--DD--ELWDPEQLYDE 2231 (5163)
T ss_pred CCCCCEeEEccHHHHH-HHHHHHHhcCCCCcceEEEecCchHHHHH-HHHHHHHhCCCEEEeC--Cc--ccCCHHHHHHH
Confidence 9999999999999998 77777788899999999999999999876 6899999999999776 32 25689999999
Q ss_pred eeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcce
Q psy9113 219 GHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIRM 268 (281)
Q Consensus 219 i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~~ 268 (281)
++++++|+++ .+|.++..+.+...... ...+|+.+..+|+.-...
T Consensus 2232 i~~~~vt~~~---~~P~~~~~l~~~~~~~~--~~~~lr~~~~gGe~l~~~ 2276 (5163)
T PRK12316 2232 MERHGVTILD---FPPVYLQQLAEHAERDG--RPPAVRVYCFGGEAVPAA 2276 (5163)
T ss_pred HHHcCCeEEE---cChHHHHHHHhhhhccc--CCcceeEEEEecccCCHH
Confidence 9999999987 66777776666543322 223677777888766543
No 71
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.96 E-value=2.5e-28 Score=225.34 Aligned_cols=224 Identities=20% Similarity=0.150 Sum_probs=181.4
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
+.++.+.+.+.+ .+|+++|+.+ .+++.+||+||.+++.++|..|++.|+++||+|+++++|++++++.++||.++|
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~---~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G 77 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIET---PDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAG 77 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEe---CCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 568899999999 8999999885 356899999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC--------------------------cCC--------------------------Cchhhhcc
Q psy9113 102 AVHSIVVSKCSGDDMST--------------------------VPA--------------------------NSERERKL 129 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~--------------------------~~~--------------------------~~~~~~~~ 129 (281)
++++|+++..+.+++.. ... ......++
T Consensus 78 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (504)
T PRK07514 78 AVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAPDDFETVPRGADD 157 (504)
T ss_pred cEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcCcccCcccCCCCC
Confidence 99999999887765543 000 00112356
Q ss_pred cc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccc
Q psy9113 130 KL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIY 208 (281)
Q Consensus 130 ~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~ 208 (281)
++ ++|||||||.||+|.++|+++.. .........++.++|++++.+|++|..|+...++.++..|+++++. +
T Consensus 158 ~a~i~~TSGtTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~--~---- 230 (504)
T PRK07514 158 LAAILYTSGTTGRSKGAMLSHGNLLS-NALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFL--P---- 230 (504)
T ss_pred eEEEEECCCCCCCCcEEEEecHHHHH-HHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEEC--C----
Confidence 77 99999999999999999999998 6666667788889999999999999999887889999999999998 5
Q ss_pred cccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 209 WCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 209 ~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
..+++.+++.+ +++|.+. ..|.++..++..... ...++++++.+...|
T Consensus 231 ~~~~~~~~~~i--~~~t~~~---~~P~~~~~l~~~~~~----~~~~~~~lr~~~~gg 278 (504)
T PRK07514 231 KFDPDAVLALM--PRATVMM---GVPTFYTRLLQEPRL----TREAAAHMRLFISGS 278 (504)
T ss_pred CCCHHHHHHHH--Hhheeee---cHHHHHHHHHcCCCC----CcccccceeeEEecC
Confidence 56889999988 4788855 455555666654332 223445555444433
No 72
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.96 E-value=7.9e-29 Score=232.60 Aligned_cols=236 Identities=16% Similarity=0.121 Sum_probs=174.2
Q ss_pred cchhhhhccCCCCCCCCCccccCCC-----CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHH
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDP-----DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLAC 97 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~-----~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~ 97 (281)
+++.++|.+.+..+||++|+++.+. +..+.+||+||.+++.++|+.|.+.| .+||+|+++++|+++++++++||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 3678899999999999999985321 22478999999999999999999999 68999999999999999999999
Q ss_pred HHhcCeEEEeecCC---CCCCcCC-------------------c----------CC------------------Cchhhh
Q psy9113 98 ARIGAVHSIVVSKC---SGDDMST-------------------V----------PA------------------NSERER 127 (281)
Q Consensus 98 ~~~G~~~v~l~~~~---~~~~~~~-------------------~----------~~------------------~~~~~~ 127 (281)
+++|++++|+++.. +.+++.+ . .. ......
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLDLDSPRGSDARPRDL 159 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecccccccCCccccCCCCC
Confidence 99999999998733 3444333 0 00 001223
Q ss_pred cccc-eeeeecCCCCCceEEEechhHHHHHHHhhhh-hcc-----CCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEE
Q psy9113 128 KLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKY-VFD-----YKPGDIYWCTADVGWITGHTYVVYGPLANGATSVI 200 (281)
Q Consensus 128 ~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~-~~~-----~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~ 200 (281)
++++ ++|||||||.||||+++|+++.. ....... .+. ...++++++.+|++|.+|++..++.+++.|+++++
T Consensus 160 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 238 (578)
T PRK05850 160 PSTAYLQYTSGSTRTPAGVMVSHRNVIA-NFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVL 238 (578)
T ss_pred CCeEEEEeCCCCCCCCceEEEeHHHHHH-HHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEE
Confidence 5778 99999999999999999999987 4433322 222 34578999999999999988889999999999999
Q ss_pred ecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 201 VSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
. +......++..+++.+++++++... +|+.++..+......... ...++++++.+...|.
T Consensus 239 ~--~~~~~~~~p~~~~~~i~~~~~~~~~---~p~~~~~~~~~~~~~~~~-~~~~~~~lr~~~~gg~ 298 (578)
T PRK05850 239 T--SPVAFLQRPARWMQLLASNPHAFSA---APNFAFELAVRKTSDDDM-AGLDLGGVLGIISGSE 298 (578)
T ss_pred e--CHHHHHHCHHHHHHHHHHcCCeEEe---CCcHHHHHHHHhcchhhh-cCcchhhheeEEECcC
Confidence 8 4211224789999999999998643 455443333332222111 2335556665544443
No 73
>PRK12316 peptide synthase; Provisional
Probab=99.96 E-value=6.7e-29 Score=274.11 Aligned_cols=239 Identities=18% Similarity=0.171 Sum_probs=197.7
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
....++++++++.++++||++|+++ .++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||++
T Consensus 4548 ~~~~~~~~l~~~~a~~~p~~~Av~~----~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lavl~ 4623 (5163)
T PRK12316 4548 PATRCVHQLVAERARMTPDAVAVVF----DEEKLTYAELNRRANRLAHALIARGVGPEVLVGIAMERSAEMMVGLLAVLK 4623 (5163)
T ss_pred CccccHHHHHHHHHHhCCCCeEEEe----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 3456899999999999999999995 467899999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEeecCCCCCCcCC-------------------cC---------------C--------Cchhhhcccc-eeeee
Q psy9113 100 IGAVHSIVVSKCSGDDMST-------------------VP---------------A--------NSERERKLKL-RKVVT 136 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~-------------------~~---------------~--------~~~~~~~~~~-i~~TS 136 (281)
+|++++|++|.++.+++.+ .+ . .....+++++ ++|||
T Consensus 4624 aG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 4703 (5163)
T PRK12316 4624 AGGAYVPLDPEYPRERLAYMMEDSGAALLLTQSHLLQRLPIPDGLASLALDRDEDWEGFPAHDPAVRLHPDNLAYVIYTS 4703 (5163)
T ss_pred hCcEEecCCCCChHHHHHHHHHhcCCCEEEechhhhhhcccccCcceEeecchhhcccCCccCCccCCCCCceEEEEECC
Confidence 9999999999998776665 00 0 0011235778 99999
Q ss_pred cCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccc
Q psy9113 137 GSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGW 216 (281)
Q Consensus 137 GTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~ 216 (281)
||||+||||+++|+++.+ ........+++.++|+++...|++|..+. ..++.+|..|+++++. +.. .+++..++
T Consensus 4704 GSTG~PKgV~~~h~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi~--~~~--~~~~~~l~ 4777 (5163)
T PRK12316 4704 GSTGRPKGVAVSHGSLVN-HLHATGERYELTPDDRVLQFMSFSFDGSH-EGLYHPLINGASVVIR--DDS--LWDPERLY 4777 (5163)
T ss_pred CCCCCCCEeeeccHHHHH-HHHHHHHhcCCCcCCeEEEecCcchhhHH-HHHHHHHhCCCEEEEc--Ccc--cCCHHHHH
Confidence 999999999999999998 77777778899999999999999999886 5889999999999998 432 23899999
Q ss_pred eeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcceeehhh
Q psy9113 217 ITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIRMWCMVL 273 (281)
Q Consensus 217 ~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~~~~~~l 273 (281)
+.++++++|+++ .+|.++..+++...... ...+|+.+..+|+.-.....+.+
T Consensus 4778 ~~i~~~~vt~~~---~~Ps~~~~l~~~~~~~~--~~~~lr~v~~gGe~l~~~~~~~~ 4829 (5163)
T PRK12316 4778 AEIHEHRVTVLV---FPPVYLQQLAEHAERDG--EPPSLRVYCFGGEAVAQASYDLA 4829 (5163)
T ss_pred HHHHHcCCEEEE---cCHHHHHHHHhhhcccc--CCCCccEEEEecccCCHHHHHHH
Confidence 999999999987 66677777766543322 33566777777776655444333
No 74
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.96 E-value=1.1e-28 Score=227.60 Aligned_cols=207 Identities=16% Similarity=0.124 Sum_probs=172.9
Q ss_pred chhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
++.+.|.+.++.+|+++|+.+ .++.+||+||.+++.++|..|.+.|+++|++|+++++|+.+++++++||+++|++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~----~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 76 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRY----QGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHA 76 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEc----CCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCE
Confidence 467888999999999999984 5689999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCcCC-------------------------cC---------------CCchhhhcccc-eeeeecCCCCC
Q psy9113 104 HSIVVSKCSGDDMST-------------------------VP---------------ANSERERKLKL-RKVVTGSTGKP 142 (281)
Q Consensus 104 ~v~l~~~~~~~~~~~-------------------------~~---------------~~~~~~~~~~~-i~~TSGTTG~P 142 (281)
++|+++.++.+++.+ +. .......++.+ ++|||||||.|
T Consensus 77 ~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~P 156 (502)
T TIGR01734 77 YIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVGTQIITLSALEQAETSGGPVSFDHAVKGDDNYYIIYTSGSTGNP 156 (502)
T ss_pred EeCCCCcChHHHHHHHHHhcCCCEEEecccccccccCCceEEchHhhhhhhhcCCccccccCCCCCeEEEEECCCCCCCC
Confidence 999999988876655 00 00111235677 99999999999
Q ss_pred ceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeee
Q psy9113 143 KGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTY 222 (281)
Q Consensus 143 K~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~ 222 (281)
|+|.++|+++.. ........++...+++++...|++|..++ ..++.++..|+++++. +.. ...++..+++.++++
T Consensus 157 K~v~~s~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~--~~~-~~~~~~~~~~~i~~~ 231 (502)
T TIGR01734 157 KGVQISHDNLVS-FTNWMLADFPLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCL--DKD-ITNNFKLLFEELPKT 231 (502)
T ss_pred CEEEEecHHHHH-HHHHHHHhCCCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEc--CHH-HhcCHHHHHHHHHHc
Confidence 999999999988 66666666788889999999999999987 5789999999999998 421 246889999999999
Q ss_pred ccceeccCCchhHHHHHHHH
Q psy9113 223 VVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 223 ~vt~~~~~~~~~~~~~~ll~ 242 (281)
+++.+. ..|.++..++.
T Consensus 232 ~~~~~~---~~p~~~~~~l~ 248 (502)
T TIGR01734 232 GLNVWV---STPSFVDMCLL 248 (502)
T ss_pred CCeEEE---EChhHHHHHHh
Confidence 999966 44445444443
No 75
>PRK09274 peptide synthase; Provisional
Probab=99.96 E-value=1.2e-28 Score=230.04 Aligned_cols=212 Identities=20% Similarity=0.200 Sum_probs=168.8
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCC------CCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHH
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPD------DYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTML 95 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~------~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~l 95 (281)
..|+.+.+.+.++++||++|+++.+.. ..+.+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++
T Consensus 5 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~l 84 (552)
T PRK09274 5 MANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTF 84 (552)
T ss_pred hhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHH
Confidence 457889999999999999999864321 12489999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeEEEeecCCCCCCcCC----------c--C--------------------------------CC---------
Q psy9113 96 ACARIGAVHSIVVSKCSGDDMST----------V--P--------------------------------AN--------- 122 (281)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~~~~----------~--~--------------------------------~~--------- 122 (281)
||+++|++++|+++.++.+++.+ + + +.
T Consensus 85 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (552)
T PRK09274 85 ALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRDGAAA 164 (552)
T ss_pred HHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhcccCccc
Confidence 99999999999999876655443 0 0 00
Q ss_pred ----chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCce
Q psy9113 123 ----SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGAT 197 (281)
Q Consensus 123 ----~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~ 197 (281)
.....++++ ++|||||||.||+|+++|+++.. ........+++.++++.+..+|++|.+++ ..|.+
T Consensus 165 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~pl~~~~~~--------~~g~~ 235 (552)
T PRK09274 165 PFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEA-QIEALREDYGIEPGEIDLPTFPLFALFGP--------ALGMT 235 (552)
T ss_pred cCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHH-HHHHHHHHhCCCCCceeeeccCHHHhhhh--------hhCCe
Confidence 001225677 99999999999999999999988 66666777888999999999999886653 24777
Q ss_pred EEEecCC-CccccccccccceeeeeeccceeccCCchhHHHHHHHHhhc
Q psy9113 198 SVIVSLP-GEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLN 245 (281)
Q Consensus 198 ~v~~~~~-~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~ 245 (281)
+++.... ..+..++++.+++.++++++|+++ .+|.++..+++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~~~ 281 (552)
T PRK09274 236 SVIPDMDPTRPATVDPAKLFAAIERYGVTNLF---GSPALLERLGRYGE 281 (552)
T ss_pred EEecCcccccccccCHHHHHHHHHHcCCeEEe---ccHHHHHHHHHHhh
Confidence 7776111 011246889999999999999977 66666677766544
No 76
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.96 E-value=1.4e-28 Score=232.36 Aligned_cols=235 Identities=14% Similarity=0.013 Sum_probs=168.7
Q ss_pred cchhhhhccCCCCCCCCCccccCCC-----CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHH
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDP-----DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLAC 97 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~-----~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~ 97 (281)
.|+.+++.+.++.+|+++|+++.+. +..+.+||+||.+++.++|++|.+. +++||+|+++++|+++++++++||
T Consensus 34 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~ 112 (612)
T PRK12476 34 TTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAA 112 (612)
T ss_pred CcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHH
Confidence 4888999999999999999886421 2246899999999999999999986 899999999999999999999999
Q ss_pred HHhcCeEEEe-ecCCC--CCCcCC--------------------------cCC----------------C-----chhhh
Q psy9113 98 ARIGAVHSIV-VSKCS--GDDMST--------------------------VPA----------------N-----SERER 127 (281)
Q Consensus 98 ~~~G~~~v~l-~~~~~--~~~~~~--------------------------~~~----------------~-----~~~~~ 127 (281)
+++|++++|+ ++.++ .+++.+ .+. . .....
T Consensus 113 ~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 192 (612)
T PRK12476 113 IKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPDSAGESFVPVELDT 192 (612)
T ss_pred HHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccccccccccCCCCCC
Confidence 9999999999 46554 333332 000 0 01123
Q ss_pred cccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhcc-CCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCC
Q psy9113 128 KLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFD-YKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPG 205 (281)
Q Consensus 128 ~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~ 205 (281)
++++ ++|||||||.||||+++|+++.. ........++ +.++++.++.+|++|.+|+... +.++..|++.++. ..
T Consensus 193 ~d~a~i~yTSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~-~~~~~~gg~~~~~--~~ 268 (612)
T PRK12476 193 DDVSHLQYTSGSTRPPVGVEITHRAVGT-NLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMI-GFPAVYGGHSTLM--SP 268 (612)
T ss_pred CceEEEEeCCCCCCCCceEEeeHHHHHH-HHHHHHHHhccCCCCceEEEeCCcccccchHHH-HHHHhcCCeEEEE--CH
Confidence 5778 99999999999999999999987 5555555566 6788999999999999998644 4444455555555 21
Q ss_pred ccccccccccceeee--eeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 206 EIYWCTADVGWITGH--TYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 206 ~~~~~~~~~~~~~i~--~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
.....++..+++.++ +++++.++ .+|. ++..++............++++++ +...|.
T Consensus 269 ~~~~~~p~~~~~~i~~~~~~~t~~~--~~P~-~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~ 327 (612)
T PRK12476 269 TAFVRRPQRWIKALSEGSRTGRVVT--AAPN-FAYEWAAQRGLPAEGDDIDLSNVV-LIIGSE 327 (612)
T ss_pred HHHHHHHHHHHHHHhhhccCCeEEE--eCCc-HHHHHHHHhcChhhhcCcchhHhe-EEeccc
Confidence 112248899999994 58888855 3343 344444432111101233566666 444443
No 77
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.96 E-value=1.9e-28 Score=228.40 Aligned_cols=234 Identities=14% Similarity=0.111 Sum_probs=181.3
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..|+.+++++.++++||++++++...+..+++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G 88 (542)
T PRK06018 9 PLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIG 88 (542)
T ss_pred CCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcC
Confidence 45899999999999999999985322446889999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC--------------------------cC---------CC------------------------
Q psy9113 102 AVHSIVVSKCSGDDMST--------------------------VP---------AN------------------------ 122 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~--------------------------~~---------~~------------------------ 122 (281)
++++|+++..+.+++.+ .+ ..
T Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (542)
T PRK06018 89 AICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEADGD 168 (542)
T ss_pred eEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhccCCcc
Confidence 99999999987766655 00 00
Q ss_pred ---chhhhcccc-eeeeecCCCCCceEEEechhHH-HHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCce
Q psy9113 123 ---SERERKLKL-RKVVTGSTGKPKGVLHTTGGYL-LYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGAT 197 (281)
Q Consensus 123 ---~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~-~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~ 197 (281)
.....++++ ++|||||||.||+|.+||+++. ...........++..+|+++...|++|.+++. ..+.++..|++
T Consensus 169 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~-~~~~~~~~g~~ 247 (542)
T PRK06018 169 FAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWG-IAFSAPSMGTK 247 (542)
T ss_pred cCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhH-HHHhhhhcCce
Confidence 001234567 9999999999999999999743 21223334456788899999999999999875 44678899999
Q ss_pred EEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 198 SVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 198 ~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
+++. . ..++++.+++.++++++|.++ .+|.++..+++....... ...+++.+..+|++.
T Consensus 248 ~v~~--~---~~~~~~~~~~~l~~~~~t~~~---~~p~~~~~l~~~~~~~~~-~~~~lr~~~~~G~~l 306 (542)
T PRK06018 248 LVMP--G---AKLDGASVYELLDTEKVTFTA---GVPTVWLMLLQYMEKEGL-KLPHLKMVVCGGSAM 306 (542)
T ss_pred EEcc--C---cCCCHHHHHHHHHhcCCceee---cCcHHHHHHHhcccccCC-CcccceEEEEcCCCC
Confidence 9886 3 256889999999999999977 556666666665543221 223444444555543
No 78
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.96 E-value=2e-28 Score=229.92 Aligned_cols=244 Identities=15% Similarity=0.020 Sum_probs=182.5
Q ss_pred ceeccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHH
Q psy9113 15 IVDTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTM 94 (281)
Q Consensus 15 ~~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~ 94 (281)
++...-+..|+.+++...++.+|+.+++ +.+++..+.+||+||++++.++|+.|+++|+++|++|+++++|+.++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~ 91 (579)
T PRK09192 13 LPRRYADFPTLVEALDYAALGEAGMNFY-DRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAF 91 (579)
T ss_pred ccccccchhhHHHHHHHhhccCCceEEE-ecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHH
Confidence 3333344469999999999988866544 433333578999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeEEEeecCCCC-------CCcCC-----------------------c-----------------CC----Cc
Q psy9113 95 LACARIGAVHSIVVSKCSG-------DDMST-----------------------V-----------------PA----NS 123 (281)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~-------~~~~~-----------------------~-----------------~~----~~ 123 (281)
+||+++|++++|+++..+. +++.+ . .. ..
T Consensus 92 lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (579)
T PRK09192 92 FACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVLSHAWFKALPEADVALP 171 (579)
T ss_pred HHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccceeehhhhcccCCCccccC
Confidence 9999999999999764431 22222 0 00 01
Q ss_pred hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhh-hccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEe
Q psy9113 124 ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKY-VFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIV 201 (281)
Q Consensus 124 ~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~-~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~ 201 (281)
....++++ ++|||||||.||+|.++|+++.. ....... .+++.++|+++..+|++|.+|+...++.++..|+++++.
T Consensus 172 ~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~-~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~ 250 (579)
T PRK09192 172 RPTPDDIAYLQYSSGSTRFPRGVIITHRALMA-NLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYL 250 (579)
T ss_pred CCCCCCeEEEEecCCCCCCCceEEeeHHHHHH-HHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEee
Confidence 12235678 99999999999999999999988 5555555 788899999999999999999887788889999999887
Q ss_pred cCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 202 SLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
+......++..+++.+.+++++..+ .|+.++..+........ ....++++++.++..|.
T Consensus 251 --~~~~~~~~~~~~~~~i~~~~~t~~~---~~~~~~~l~~~~~~~~~-~~~~~l~~lr~~~~gG~ 309 (579)
T PRK09192 251 --PTRDFARRPLQWLDLISRNRGTISY---SPPFGYELCARRVNSKD-LAELDLSCWRVAGIGAD 309 (579)
T ss_pred --CHHHHHHCHHHHHHHHHhcCcEEEe---CCcHHHHHHHHhhcccc-ccccchhhhheeEecCc
Confidence 4222234788999999999998865 45554433332222111 13356677776655554
No 79
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.95 E-value=2.1e-28 Score=227.11 Aligned_cols=216 Identities=19% Similarity=0.219 Sum_probs=181.7
Q ss_pred ceeccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHH
Q psy9113 15 IVDTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTM 94 (281)
Q Consensus 15 ~~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~ 94 (281)
+.+...+..|+.+++.+.++++|+++|+++ .++.+||+||.+++.++|..|.+.|+++|++|+++++|++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~ 79 (524)
T PRK06188 4 MADLLHSGATYGHLLVSALKRYPDRPALVL----GDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAI 79 (524)
T ss_pred hHhhhcCCccHHHHHHHHHHHCCCCeEEEE----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 345566677999999999999999999995 4579999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeEEEeecCCCCCCcCC-----------c-CC-----------------------------------------
Q psy9113 95 LACARIGAVHSIVVSKCSGDDMST-----------V-PA----------------------------------------- 121 (281)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~~~~-----------~-~~----------------------------------------- 121 (281)
+||+++|++++|+++..+.+++.. . +.
T Consensus 80 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (524)
T PRK06188 80 GAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAKFGPA 159 (524)
T ss_pred HHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhccCcc
Confidence 999999999999998876554333 0 00
Q ss_pred --Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceE
Q psy9113 122 --NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATS 198 (281)
Q Consensus 122 --~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~ 198 (281)
......++++ ++|||||||.||+|.++|.++.. ........+++..+++++..+|++|.+|+ .++.++..|+++
T Consensus 160 ~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~-~~~~~~~~~~~~~~~~~l~~~pl~~~~g~--~~~~~l~~G~~~ 236 (524)
T PRK06188 160 PLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIAT-MAQIQLAEWEWPADPRFLMCTPLSHAGGA--FFLPTLLRGGTV 236 (524)
T ss_pred cccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHH-HHHHHHhhcCCCcCcEEEEecCchhhhhH--HHHHHHHcCCEE
Confidence 0001124567 99999999999999999999988 67777777888899999999999999886 367889999999
Q ss_pred EEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcc
Q psy9113 199 VIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNT 246 (281)
Q Consensus 199 v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~ 246 (281)
++. + .++++.+++.++++++|+++ .+|.++..+++....
T Consensus 237 ~~~--~----~~~~~~~~~~i~~~~~t~~~---~~P~~l~~l~~~~~~ 275 (524)
T PRK06188 237 IVL--A----KFDPAEVLRAIEEQRITATF---LVPTMIYALLDHPDL 275 (524)
T ss_pred EEc--C----CCCHHHHHHHHHHhCCEEEE---ehHHHHHHHHhCcCc
Confidence 999 5 57899999999999999977 666666777766543
No 80
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=3.1e-28 Score=228.53 Aligned_cols=233 Identities=15% Similarity=0.106 Sum_probs=181.8
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCcHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKS-KGVQKGDRVAIYLPMVLEIVVTMLACA 98 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n~~~~~~~~lA~~ 98 (281)
+...|+.++|++.+..+||++|+++. .+.++.+||+||.+++.++|..|.+ .|+++||+|+++++|+.+++++++||+
T Consensus 7 ~~~~~~~~~l~~~a~~~~~~~a~~~~-~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~ 85 (576)
T PRK05620 7 DVPLSLTRILEYGSTVHGDTTVTTWG-GAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVA 85 (576)
T ss_pred cCCCcHHHHHHHHHHhCCCceEEEEc-CCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 34568999999999999999998863 2346899999999999999999986 799999999999999999999999999
Q ss_pred HhcCeEEEeecCCCCCCcCC--------------------------cC------------C-------------------
Q psy9113 99 RIGAVHSIVVSKCSGDDMST--------------------------VP------------A------------------- 121 (281)
Q Consensus 99 ~~G~~~v~l~~~~~~~~~~~--------------------------~~------------~------------------- 121 (281)
++|++++++++..+.+++.+ .+ .
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (576)
T PRK05620 86 CMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEAL 165 (576)
T ss_pred hcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHH
Confidence 99999999999887776666 00 0
Q ss_pred ---------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHh--hhhhccCCCCCEEEEeCchhhhhhHhHHHH
Q psy9113 122 ---------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATT--HKYVFDYKPGDIYWCTADVGWITGHTYVVY 189 (281)
Q Consensus 122 ---------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~--~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~ 189 (281)
......++++ ++|||||||.||||+++|+++.. .... ....+++.+++++++.+|++|.+|+. ..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~-~~~ 243 (576)
T PRK05620 166 LDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYL-QSLSLRTTDSLAVTHGESFLCCVPIYHVLSWG-VPL 243 (576)
T ss_pred hhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHH-HHHHhhhhhhcCCCCCCeEEEeCChHHhhhhH-HHH
Confidence 0011225667 99999999999999999999865 3332 23346788899999999999999974 668
Q ss_pred hhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCC
Q psy9113 190 GPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSL 264 (281)
Q Consensus 190 ~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~ 264 (281)
.++..|+++++. +. .++++.+++.++++++|.++ ..|.++..++........ ...+++.+..+|+.
T Consensus 244 ~~l~~g~~~~~~--~~---~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~~~~~~-~~~~l~~~~~gG~~ 309 (576)
T PRK05620 244 AAFMSGTPLVFP--GP---DLSAPTLAKIIATAMPRVAH---GVPTLWIQLMVHYLKNPP-ERMSLQEIYVGGSA 309 (576)
T ss_pred HHHhcCceEEec--CC---CCCHHHHHHHHHHhcCceee---ecCHHHHHHHHHhhccCc-ccCceeEEEEcCCC
Confidence 899999999987 42 46899999999999999966 444455555554322211 22345555455543
No 81
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=1.4e-28 Score=229.28 Aligned_cols=230 Identities=20% Similarity=0.140 Sum_probs=183.1
Q ss_pred cccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 21 QTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 21 ~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
..+|+.+.+.+.++.+|+++|+.+ .++.+||.||.++++++|..|.+.|+++|++|+++++|+++++++++||+++
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~----~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~ 90 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRF----LGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANML 90 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEe----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 456899999999999999999985 4579999999999999999999999999999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC--------------------------cC------------------C------------Cch
Q psy9113 101 GAVHSIVVSKCSGDDMST--------------------------VP------------------A------------NSE 124 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~--------------------------~~------------------~------------~~~ 124 (281)
|++++|+++..+.+++.. .+ + ...
T Consensus 91 G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (542)
T PRK07786 91 GAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGPAHAPVD 170 (542)
T ss_pred CeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCCCCCCCC
Confidence 999999998876555444 00 0 000
Q ss_pred hhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccC-CCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEec
Q psy9113 125 RERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDY-KPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVS 202 (281)
Q Consensus 125 ~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~-~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~ 202 (281)
...++++ ++|||||||.||+|.++|+++.. ........++. .+++++++..|++|.+|+ ..++.++..|+++++.
T Consensus 171 ~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~- 247 (542)
T PRK07786 171 IPNDSPALIMYTSGTTGRPKGAVLTHANLTG-QAMTCLRTNGADINSDVGFVGVPLFHIAGI-GSMLPGLLLGAPTVIY- 247 (542)
T ss_pred CCCCCeEEEEeCCCCCccchhhhhhHHHHHH-HHHHHHHhcCCCCCCceEEEecchHHHHHH-HHHHHHHHccCEEEEc-
Confidence 1124577 99999999999999999999987 55555555565 567899999999999998 5789999999999997
Q ss_pred CCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCC
Q psy9113 203 LPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLD 265 (281)
Q Consensus 203 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g 265 (281)
+. ..++++.+++.++++++|.++ .+|.++..++....... ....++.+..+|+.-
T Consensus 248 -~~--~~~~~~~~~~~i~~~~~t~~~---~~P~~l~~l~~~~~~~~--~~~~lr~i~~gg~~~ 302 (542)
T PRK07786 248 -PL--GAFDPGQLLDVLEAEKVTGIF---LVPAQWQAVCAEQQARP--RDLALRVLSWGAAPA 302 (542)
T ss_pred -cC--CCcCHHHHHHHHHHcCCeEEE---ehHHHHHHHHhCcccCc--cCcceEEEEECCCCC
Confidence 31 146899999999999999977 56666777766544322 222445444455443
No 82
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.95 E-value=6.8e-28 Score=221.77 Aligned_cols=202 Identities=18% Similarity=0.174 Sum_probs=166.0
Q ss_pred ccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeec
Q psy9113 30 TPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVS 109 (281)
Q Consensus 30 ~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~ 109 (281)
+.+++.+||++|+.+. ..++.+||+|+.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++++|+++
T Consensus 2 ~~~a~~~p~~~a~~~~--~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 2 AFHARLQPQRLAAVDL--ALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNW 79 (488)
T ss_pred chhhhhCCCceEEEec--CCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCc
Confidence 4566789999998752 24579999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCC-----------------------cCC--------------Cchhhhcccc-eeeeecCCCCCceEEEechh
Q psy9113 110 KCSGDDMST-----------------------VPA--------------NSERERKLKL-RKVVTGSTGKPKGVLHTTGG 151 (281)
Q Consensus 110 ~~~~~~~~~-----------------------~~~--------------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~ 151 (281)
..+.+++.+ ... ......++++ ++|||||||.||+|.++|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~ 159 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDDAVAAGRTDVEDLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERN 159 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcchhhcccccccchhhhhhhccccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHH
Confidence 988776655 000 0011225677 99999999999999999999
Q ss_pred HHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeee--eeccceecc
Q psy9113 152 YLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGH--TYVVYGPLA 229 (281)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~--~~~vt~~~~ 229 (281)
+.. .............++++++.+|++|.+|+...+..++..|+++++. + .+++...+..+. ++++|.++
T Consensus 160 l~~-~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~--~----~~~~~~~~~~~~~~~~~~t~~~- 231 (488)
T PRK09088 160 LQQ-TAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVS--N----GFEPKRTLGRLGDPALGITHYF- 231 (488)
T ss_pred HHH-HHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEc--C----CCCHHHHHHHHHhhccCCcEEe-
Confidence 987 6655555667788999999999999999988888999999999988 4 567788888775 58899866
Q ss_pred CCchhHHHHHHHHh
Q psy9113 230 NGATSVIVSETLKM 243 (281)
Q Consensus 230 ~~~~~~~~~~ll~~ 243 (281)
..|.++..+.+.
T Consensus 232 --~~P~~~~~l~~~ 243 (488)
T PRK09088 232 --CVPQMAQAFRAQ 243 (488)
T ss_pred --eHHHHHHHHHhC
Confidence 555566555543
No 83
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.95 E-value=4.2e-28 Score=226.29 Aligned_cols=210 Identities=19% Similarity=0.113 Sum_probs=168.8
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..|+.+.+.+.++.+|+++|+.+. .+++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 27 ~~~~~~~l~~~a~~~p~~~a~~~~--~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 104 (546)
T PLN02330 27 KLTLPDFVLQDAELYADKVAFVEA--VTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAG 104 (546)
T ss_pred CCcHHHHHhhhhhcCCCccEEEec--CCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhC
Confidence 368999999999999999999853 235789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC----------------------c-------C---------------C---------Cchhhhc
Q psy9113 102 AVHSIVVSKCSGDDMST----------------------V-------P---------------A---------NSERERK 128 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~----------------------~-------~---------------~---------~~~~~~~ 128 (281)
++++|+++..+.+++.+ . . . ......+
T Consensus 105 ~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (546)
T PLN02330 105 GVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWKELLEAADRAGDTSDNEEILQT 184 (546)
T ss_pred cEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHHHHHhhccccCcccccccCCcc
Confidence 99999999887665554 0 0 0 0001124
Q ss_pred ccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhc--cCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCC
Q psy9113 129 LKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVF--DYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPG 205 (281)
Q Consensus 129 ~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~ 205 (281)
+++ ++|||||||.||||.++|+++.. ......... .....++.+..+|++|.+|+...++.++..|+++++. +
T Consensus 185 ~~a~il~TSGTTG~PKgv~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~--~- 260 (546)
T PLN02330 185 DLCALPFSSGTTGISKGVMLTHRNLVA-NLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVM--S- 260 (546)
T ss_pred cEEEEEeCCCCcCCCcEEEEehHHHHH-HHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEe--c-
Confidence 667 99999999999999999999887 443221111 1223468899999999999877788999999999998 4
Q ss_pred ccccccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 206 EIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
.+++..+++.++++++|.+. ..|.++..+++.
T Consensus 261 ---~~~~~~~~~~i~~~~vt~~~---~~P~~~~~l~~~ 292 (546)
T PLN02330 261 ---RFELRTFLNALITQEVSFAP---IVPPIILNLVKN 292 (546)
T ss_pred ---ccCHHHHHHHHHHcCCeeee---cCCHHHHHHHhC
Confidence 68899999999999999955 334444555543
No 84
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.95 E-value=3.5e-28 Score=225.30 Aligned_cols=232 Identities=16% Similarity=0.095 Sum_probs=179.4
Q ss_pred cccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 21 QTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 21 ~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
...++.+.+.+.++.+||++|+.+ +.+.+||+|+.++++++|+.|.+.|+++|++|+++++|+++++++++||..+
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~----~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 108 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIID----DDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLL 108 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEe----CCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 356899999999999999999985 4568999999999999999999999999999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC-----------------------------cCCC---------chhhhcccc-eeeeecCCCC
Q psy9113 101 GAVHSIVVSKCSGDDMST-----------------------------VPAN---------SERERKLKL-RKVVTGSTGK 141 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~-----------------------------~~~~---------~~~~~~~~~-i~~TSGTTG~ 141 (281)
|++++|+++.++.+++.+ +... .....++.. ++|||||||.
T Consensus 109 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~TSGTTG~ 188 (516)
T PRK13383 109 GADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPATAGAEESGGRPAVAAPGRIVLLTSGTTGK 188 (516)
T ss_pred CeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccchhhhhcCCCCCCCCCCCcEEEECCCCCCC
Confidence 999999999998887765 0000 000123456 9999999999
Q ss_pred CceEEEechhHHHH-HHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeee
Q psy9113 142 PKGVLHTTGGYLLY-AATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGH 220 (281)
Q Consensus 142 PK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~ 220 (281)
||+|.++|...... .........++..+++++..+|++|.+|+. .++.++..|+++++. + .++++.+++.++
T Consensus 189 PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~~~~~~--~----~~~~~~~~~~i~ 261 (516)
T PRK13383 189 PKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGGTVLTH--R----HFDAEAALAQAS 261 (516)
T ss_pred CCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHH-HHHHHHhcCCEEEEC--C----CCCHHHHHHHHH
Confidence 99999999743220 111223346778899999999999999985 678889999999887 4 678999999999
Q ss_pred eeccceeccCCchhHHHHHHHHhhcccc-ccccccchhhhhccCCCc
Q psy9113 221 TYVVYGPLANGATSVIVSETLKMLNTNF-FCILYTISSLMWAGSLDI 266 (281)
Q Consensus 221 ~~~vt~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~L~sl~~~g~~g~ 266 (281)
++++|.+. ..|.++..+++...... ......++.+..+|++..
T Consensus 262 ~~~~t~~~---~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~ 305 (516)
T PRK13383 262 LHRADAFT---AVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLD 305 (516)
T ss_pred HhCCcEEE---ecHHHHHHHHhccccccccCCCCceEEEEECCCCCC
Confidence 99999977 55556666665433211 112234555555555543
No 85
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=5.7e-28 Score=225.05 Aligned_cols=215 Identities=15% Similarity=0.096 Sum_probs=172.5
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.++.++|+..++.+|++.++.+...++.+.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||.++|+
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~ 89 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGA 89 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 37899999999999998888754223457899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC--------------------------c---------------CCC-------------------
Q psy9113 103 VHSIVVSKCSGDDMST--------------------------V---------------PAN------------------- 122 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~--------------------------~---------------~~~------------------- 122 (281)
+++|+++.++.+++.+ . +..
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (539)
T PRK07008 90 VCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQDGDYD 169 (539)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcccCCCcC
Confidence 9999999877776544 0 000
Q ss_pred -chhhhcccc-eeeeecCCCCCceEEEechhHHHH-HHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEE
Q psy9113 123 -SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLY-AATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSV 199 (281)
Q Consensus 123 -~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v 199 (281)
.....++++ ++|||||||.||+|++||+++... ........++..++|+++...|++|.+++. .++.++..|++++
T Consensus 170 ~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~~G~~~~ 248 (539)
T PRK07008 170 WPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWG-LPYSAPLTGAKLV 248 (539)
T ss_pred cccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHH-HHHHHHhcCceEE
Confidence 001224566 999999999999999999998651 122233456778899999999999988763 4578899999999
Q ss_pred EecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcc
Q psy9113 200 IVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNT 246 (281)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~ 246 (281)
+. +. .++++.+++.++++++|.+. .+|.++..+++....
T Consensus 249 ~~--~~---~~~~~~~~~~l~~~~vt~~~---~~P~~~~~l~~~~~~ 287 (539)
T PRK07008 249 LP--GP---DLDGKSLYELIEAERVTFSA---GVPTVWLGLLNHMRE 287 (539)
T ss_pred Ee--cC---CcCHHHHHHHHHHcCCEEEE---echHHHHHHHhcccc
Confidence 87 42 56899999999999999966 555666666665543
No 86
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.95 E-value=1.1e-27 Score=222.61 Aligned_cols=206 Identities=17% Similarity=0.086 Sum_probs=173.4
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSK-GVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
..++.++|.+.+. +|++++++ .++.+||+||++++.++|++|+++ |++++++|+++++|+++++++++||+++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~----~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~ 77 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYF----EDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALS 77 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEE----CCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 4478899988885 78899885 458999999999999999999997 8899999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC----------------------c---------C---C-------------Cchhhhcccc-e
Q psy9113 101 GAVHSIVVSKCSGDDMST----------------------V---------P---A-------------NSERERKLKL-R 132 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~----------------------~---------~---~-------------~~~~~~~~~~-i 132 (281)
|++++|+++..+.+++.+ . + + ......++++ +
T Consensus 78 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 157 (529)
T PRK07867 78 GIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDSPAWADELAAHRDAEPPFRVADPDDLFML 157 (529)
T ss_pred CCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEeccccHHHHhcccCCCCCCcccCCccceEEE
Confidence 999999999999888766 0 0 0 0001235677 9
Q ss_pred eeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccc
Q psy9113 133 KVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTA 212 (281)
Q Consensus 133 ~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~ 212 (281)
+|||||||.||+|+++|+++.. ........+++.++|+++..+|++|.+|+...++.++..|+++++. + .+++
T Consensus 158 ~~TSGTTG~PKgv~~s~~~l~~-~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~--~----~~~~ 230 (529)
T PRK07867 158 IFTSGTSGDPKAVRCTHRKVAS-AGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALR--R----KFSA 230 (529)
T ss_pred EECCCCCCCCcEEEecHHHHHH-HHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEec--C----CCCH
Confidence 9999999999999999999987 6666777788889999999999999999887888899999999998 4 5789
Q ss_pred cccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 213 DVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 213 ~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
+.+++.++++++|.+. ++|..+..++..
T Consensus 231 ~~~~~~i~~~~vt~~~---~~p~~~~~ll~~ 258 (529)
T PRK07867 231 SGFLPDVRRYGATYAN---YVGKPLSYVLAT 258 (529)
T ss_pred HHHHHHHHHhCCeEEe---ccHHHHHHHHhC
Confidence 9999999999999976 333444444443
No 87
>PLN02479 acetate-CoA ligase
Probab=99.95 E-value=5.4e-28 Score=226.50 Aligned_cols=207 Identities=17% Similarity=0.198 Sum_probs=169.2
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.|+.+.+.+.++.+|+++|+.+ ..+.+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~----~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 95 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVH----GSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGA 95 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEE----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCc
Confidence 4678888999999999999985 456899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------c----------------C------CC----------------------------
Q psy9113 103 VHSIVVSKCSGDDMST----------V----------------P------AN---------------------------- 122 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------~----------------~------~~---------------------------- 122 (281)
+++|+++.++.+++.+ + . ..
T Consensus 96 v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
T PLN02479 96 VVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEY 175 (567)
T ss_pred EEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccH
Confidence 9999999988777665 0 0 00
Q ss_pred --------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHH
Q psy9113 123 --------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYV 187 (281)
Q Consensus 123 --------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~ 187 (281)
.....++++ ++|||||||.||+|+++|+++.. ........+++.++++.+..+|++|.+|+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~ 254 (567)
T PLN02479 176 EKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYL-MALSNALIWGMNEGAVYLWTLPMFHCNGWCFT 254 (567)
T ss_pred HHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHH-HHHHHHhhcCCCCCCEEEEecchhhhhhHHHH
Confidence 000012456 99999999999999999999876 55444556778889999999999999997655
Q ss_pred HHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 188 VYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 188 ~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
+...+..|.++++. .++++.+++.++++++|+++ .+|.++..+++..
T Consensus 255 ~~~~~~~g~~~~~~-------~~~~~~~~~~l~~~~~t~~~---~~P~~~~~l~~~~ 301 (567)
T PLN02479 255 WTLAALCGTNICLR-------QVTAKAIYSAIANYGVTHFC---AAPVVLNTIVNAP 301 (567)
T ss_pred HHHHhhcCceEecc-------CCCHHHHHHHHHHcCCeEEE---ecHHHHHHHHhhh
Confidence 55566667666554 67899999999999999976 5566666666554
No 88
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.95 E-value=4.6e-28 Score=226.93 Aligned_cols=213 Identities=23% Similarity=0.261 Sum_probs=174.5
Q ss_pred eccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHH
Q psy9113 17 DTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLA 96 (281)
Q Consensus 17 ~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA 96 (281)
....+..++.+.+.+.++.+||++|+.+ .++.+||+||.+++.++|..|.++|+++|++|+++++|+++++++++|
T Consensus 27 ~~~~~~~~l~~~l~~~a~~~p~~~al~~----~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 102 (567)
T PRK06178 27 EYPHGERPLTEYLRAWARERPQRPAIIF----YGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFG 102 (567)
T ss_pred CCCcCcccHHHHHHHHHHHCCCceEEEE----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHH
Confidence 3344556899999999999999999985 357899999999999999999999999999999999999999999999
Q ss_pred HHHhcCeEEEeecCCCCCCcCC----------------------c------------------CC---------------
Q psy9113 97 CARIGAVHSIVVSKCSGDDMST----------------------V------------------PA--------------- 121 (281)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~~~~----------------------~------------------~~--------------- 121 (281)
|+++|++++|++|..+.+++.+ . +.
T Consensus 103 ~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (567)
T PRK06178 103 ILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRL 182 (567)
T ss_pred HHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccccccccccccccccccc
Confidence 9999999999999877654433 0 00
Q ss_pred --------------------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhh-hhhccCCCCCEEEEeCchh
Q psy9113 122 --------------------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTH-KYVFDYKPGDIYWCTADVG 179 (281)
Q Consensus 122 --------------------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~-~~~~~~~~~~~~l~~~pl~ 179 (281)
......++++ ++|||||||.||+|+++|+++.. ..... .......++++++..+|++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~-~~~~~~~~~~~~~~~d~~l~~~p~~ 261 (567)
T PRK06178 183 AAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVY-TAAAAYAVAVVGGEDSVFLSFLPEF 261 (567)
T ss_pred cccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHH-HHHHHHHHhccCCCCcEEEEecchH
Confidence 0001235677 99999999999999999999887 43332 2235678899999999999
Q ss_pred hhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 180 WITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 180 h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
|.+|+...++.++..|+++++. + .++++.+++.++++++|.++ .++.++..++..
T Consensus 262 ~~~g~~~~~~~~l~~G~~~~l~--~----~~~~~~~~~~i~~~~~t~~~---~~~~~~~~l~~~ 316 (567)
T PRK06178 262 WIAGENFGLLFPLFSGATLVLL--A----RWDAVAFMAAVERYRVTRTV---MLVDNAVELMDH 316 (567)
T ss_pred HHHHHHHHHHHHHHcCceEEEe--C----CCCHHHHHHHHHHhCCeEEe---ccHHHHHHHHhC
Confidence 9999877889999999999999 5 57899999999999999965 334444455443
No 89
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=2.7e-28 Score=245.22 Aligned_cols=209 Identities=19% Similarity=0.116 Sum_probs=177.2
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.|+.+.+.+.++++||++|+++ ..++++||+|+.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|+
T Consensus 615 ~~l~~~~~~~a~~~p~~~a~~~---~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 615 PPLAEAWIDTAKRNWSRLAVAD---STGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCHHHHHHHHHHhcCCCcEEEc---CCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 4788999999999999999985 245799999999999999999987 489999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC-------------------cC-------C-------------------------------C---
Q psy9113 103 VHSIVVSKCSGDDMST-------------------VP-------A-------------------------------N--- 122 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~-------------------~~-------~-------------------------------~--- 122 (281)
+++|+++..+.+++.+ .. . +
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPARL 770 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCCHHH
Confidence 9999999987765554 00 0 0
Q ss_pred ------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccC
Q psy9113 123 ------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANG 195 (281)
Q Consensus 123 ------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G 195 (281)
.....++++ ++|||||||.||+|.++|+++.. ........++..++|++++.+|++|.+|+...++.++..|
T Consensus 771 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g 849 (1146)
T PRK08633 771 LKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILS-NIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEG 849 (1146)
T ss_pred HHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHH-HHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCC
Confidence 011235777 99999999999999999999998 6777777788899999999999999999877789999999
Q ss_pred ceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 196 ATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
+++++. ++ .++++.+++.++++++|++. .+|.++..+++..
T Consensus 850 ~~~v~~--~~---~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~ 890 (1146)
T PRK08633 850 IKVVYH--PD---PTDALGIAKLVAKHRATILL---GTPTFLRLYLRNK 890 (1146)
T ss_pred CEEEEe--CC---CCCHHHHHHHHHHcCCeEEE---ecHHHHHHHHhcc
Confidence 999998 42 46899999999999999977 5566666665543
No 90
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.95 E-value=5.8e-28 Score=224.34 Aligned_cols=211 Identities=19% Similarity=0.207 Sum_probs=170.0
Q ss_pred cccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 21 QTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 21 ~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
..+|+.+++.+.++++||++|+.+ .++.+||+|+.+++.++|..|++.|+++|++|+++++|+++++++++||+++
T Consensus 5 ~~~~~~~~~~~~a~~~p~~~a~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 80 (528)
T PRK07470 5 RVMNLAHFLRQAARRFPDRIALVW----GDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRL 80 (528)
T ss_pred cCCCHHHHHHHHHHHCCCceEEEE----CCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhC
Confidence 345789999999999999999985 4578999999999999999999999999999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC-----------cC--------------------------------------------CCchh
Q psy9113 101 GAVHSIVVSKCSGDDMST-----------VP--------------------------------------------ANSER 125 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~-----------~~--------------------------------------------~~~~~ 125 (281)
|++++++++..+.+++.+ .. .....
T Consensus 81 G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (528)
T PRK07470 81 GAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHLGARVANAAV 160 (528)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCCCCCCCcccC
Confidence 999999999887665554 00 00011
Q ss_pred hhcccc-eeeeecCCCCCceEEEechhHHHHHHHh-hhhh-ccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEec
Q psy9113 126 ERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATT-HKYV-FDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVS 202 (281)
Q Consensus 126 ~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~-~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~ 202 (281)
..++++ ++|||||||.||+|.++|+++.. .... .... .+..+.|+++..+|++|.+|+. .+ ..++.|++.++.
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~-~~~~~g~~~~~~- 236 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAF-VITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QL-CQVARGAATVLL- 236 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHH-HHHHHHHHhccCCCcccEEEEeccchhHHHHH-HH-HHHhcCceEEEe-
Confidence 235778 99999999999999999999875 3322 2222 2567789999999999999874 44 467788888777
Q ss_pred CCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhc
Q psy9113 203 LPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLN 245 (281)
Q Consensus 203 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~ 245 (281)
+. ..++++.+++.++++++|.+. .+|.++..+.+...
T Consensus 237 -~~--~~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~~ 273 (528)
T PRK07470 237 -PS--ERFDPAEVWALVERHRVTNLF---TVPTILKMLVEHPA 273 (528)
T ss_pred -cc--cCcCHHHHHHHHHhcCCeEEe---chHHHHHHHHhCcC
Confidence 32 257899999999999999977 66666666665543
No 91
>PRK05691 peptide synthase; Validated
Probab=99.95 E-value=3.2e-28 Score=266.86 Aligned_cols=229 Identities=14% Similarity=0.094 Sum_probs=191.5
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++++++++.++++||++|+++ .+..+||+||.++++++|+.|.++|+++|++|+++++++.+++++++|++++|
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~----~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG 3794 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASC----LDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAG 3794 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEc----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhC
Confidence 34899999999999999999995 56789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC--------------------------cC----------------------CCchhhhcccc-e
Q psy9113 102 AVHSIVVSKCSGDDMST--------------------------VP----------------------ANSERERKLKL-R 132 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~--------------------------~~----------------------~~~~~~~~~~~-i 132 (281)
+.+||++|.++.+++.+ .. ......+++.+ +
T Consensus 3795 ~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ayv 3874 (4334)
T PRK05691 3795 AGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEVQAGEVASHNPGIYSGPDNLAYV 3874 (4334)
T ss_pred cEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecccccccccccCCCCCCCCCceEEE
Confidence 99999999999887776 00 00011235678 9
Q ss_pred eeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccc
Q psy9113 133 KVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTA 212 (281)
Q Consensus 133 ~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~ 212 (281)
+|||||||+||||+++|+++.+ ........++++++++++...|++|..+. ..++.+|..|+++++. +.. ...++
T Consensus 3875 i~TSGSTG~PKGV~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~fd~s~-~~~~~~l~~G~~l~i~--~~~-~~~~~ 3949 (4334)
T PRK05691 3875 IYTSGSTGLPKGVMVEQRGMLN-NQLSKVPYLALSEADVIAQTASQSFDISV-WQFLAAPLFGARVEIV--PNA-IAHDP 3949 (4334)
T ss_pred EECCCCCCCCCEEEeehHHHHH-HHHHHHHhcCCCccceEEEecCCchhHHH-HHHHHHHhCCCEEEEc--Ccc-ccCCH
Confidence 9999999999999999999999 77777778899999999999999999986 6899999999999998 432 25688
Q ss_pred cccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 213 DVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 213 ~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
..+++.++++++|++. .+|.++..++..... ...+|+.+..+|+.-.
T Consensus 3950 ~~l~~~~~~~~vt~~~---~~Ps~~~~l~~~~~~----~~~~lr~~~~gGe~l~ 3996 (4334)
T PRK05691 3950 QGLLAHVQAQGITVLE---SVPSLIQGMLAEDRQ----ALDGLRWMLPTGEAMP 3996 (4334)
T ss_pred HHHHHHHHHcCCeEEE---eCHHHHHHHHhhccc----cCCCceEEEecCCcCC
Confidence 9999999999999977 556666666543221 2345666666676644
No 92
>PRK05691 peptide synthase; Validated
Probab=99.95 E-value=4.3e-28 Score=265.81 Aligned_cols=233 Identities=19% Similarity=0.125 Sum_probs=193.3
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++++++.+.++++||++|+++ .++.+||+||.++++++|+.|.+.|+++|++|+++++|+.+++++++|++++|
T Consensus 2187 ~~~l~~~~~~~a~~~p~~~Av~~----~~~~lTY~eL~~~~~~lA~~L~~~Gv~~g~~V~l~~~~s~~~vv~~lailkaG 2262 (4334)
T PRK05691 2187 DQTLHGLFAAQAARTPQAPALTF----AGQTLSYAELDARANRLARALRERGVGPQVRVGLALERSLEMVVGLLAILKAG 2262 (4334)
T ss_pred ccchHHHHHHHHHHCCCCeEEEe----CCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 45799999999999999999995 56899999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC-------------------c---C-------C---------------Cchhhhcccc-eeeee
Q psy9113 102 AVHSIVVSKCSGDDMST-------------------V---P-------A---------------NSERERKLKL-RKVVT 136 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~-------------------~---~-------~---------------~~~~~~~~~~-i~~TS 136 (281)
++++|++|.++.+++.+ . + . .....+++++ ++|||
T Consensus 2263 ~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 2342 (4334)
T PRK05691 2263 GAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFEALGELPAGVARWCLEDDAAALAAYSDAPLPFLSLPQHQAYLIYTS 2342 (4334)
T ss_pred cEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhhhhccccccceeEEeccchhhhhcCCCCCCCCCCCCCCcEEEEeCC
Confidence 99999999998877666 0 0 0 0001235677 99999
Q ss_pred cCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccc
Q psy9113 137 GSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGW 216 (281)
Q Consensus 137 GTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~ 216 (281)
||||+||||+++|+++.. ........+++.++|+++...|++|..+. ..++.+|..|+++++. +. ..++++.++
T Consensus 2343 GSTG~PKGV~~~h~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~i~~~L~~G~~lvl~--~~--~~~~~~~l~ 2416 (4334)
T PRK05691 2343 GSTGKPKGVVVSHGEIAM-HCQAVIERFGMRADDCELHFYSINFDAAS-ERLLVPLLCGARVVLR--AQ--GQWGAEEIC 2416 (4334)
T ss_pred CCCCCCCEEEEecHHHHH-HHHHHHHhcCCCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEEC--Cc--ccCCHHHHH
Confidence 999999999999999998 77777778899999999999999999886 6889999999999987 32 146889999
Q ss_pred eeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCccee
Q psy9113 217 ITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIRMW 269 (281)
Q Consensus 217 ~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~~~ 269 (281)
+.++++++|++. .+|.++..+++...... ...+|+.+..+|+.-....
T Consensus 2417 ~~i~~~~vt~~~---~tPs~~~~l~~~~~~~~--~~~~lr~i~~gGe~l~~~~ 2464 (4334)
T PRK05691 2417 QLIREQQVSILG---FTPSYGSQLAQWLAGQG--EQLPVRMCITGGEALTGEH 2464 (4334)
T ss_pred HHHHHcCCeEEE---cCHHHHHHHHHhhhccc--cCCCceEEEEccccCCHHH
Confidence 999999999977 56666666665543221 2345677777777655433
No 93
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.95 E-value=6.2e-28 Score=222.49 Aligned_cols=231 Identities=17% Similarity=0.135 Sum_probs=184.0
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
+++.+.|.+.++.+|+++++.+ .++.+||+||.+++.++|..|.+.|+++|++|+++.+|+.++++.++||+++|+
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~----~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~ 77 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDY----LGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGH 77 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEe----CCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 4688999999999999999884 467899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC---------------c-------C-------------C-----Cchhhhcccc-eeeeecCCCC
Q psy9113 103 VHSIVVSKCSGDDMST---------------V-------P-------------A-----NSERERKLKL-RKVVTGSTGK 141 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~---------------~-------~-------------~-----~~~~~~~~~~-i~~TSGTTG~ 141 (281)
+++|+++..+.+++.+ . + . ......++++ ++|||||||.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~ 157 (503)
T PRK04813 78 AYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEILGIPVITLDELKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGK 157 (503)
T ss_pred EEecCCCCChHHHHHHHHHhcCCCEEEecccccccccCCcEEehHHhhhhhhccccccccccCCCCCcEEEEECCCCCCC
Confidence 9999999988776554 0 0 0 0111235677 9999999999
Q ss_pred CceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeee
Q psy9113 142 PKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHT 221 (281)
Q Consensus 142 PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~ 221 (281)
||+|.++|+++.. ........+++..+++++...|++|..++ ..++.++..|+++++. +. ....++..+++.+++
T Consensus 158 PK~v~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~--~~-~~~~~~~~~~~~~~~ 232 (503)
T PRK04813 158 PKGVQISHDNLVS-FTNWMLEDFALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVAL--PK-DMTANFKQLFETLPQ 232 (503)
T ss_pred CcEEEeehHHHHH-HHHHHHHHcCCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEc--Ch-hhhcCHHHHHHHHHH
Confidence 9999999999988 66666666788889999999999999886 5788999999999998 42 124689999999999
Q ss_pred eccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 222 YVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 222 ~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
++++.+. .+|.++..++........ ...+++.+...|+.-.
T Consensus 233 ~~~t~~~---~~p~~~~~~~~~~~~~~~-~~~~l~~i~~~G~~l~ 273 (503)
T PRK04813 233 LPINVWV---STPSFADMCLLDPSFNEE-HLPNLTHFLFCGEELP 273 (503)
T ss_pred cCCeEEE---eChHHHHHHHHhhccCcc-cCCCceEEEEecCcCC
Confidence 9999976 555555544443322111 2334555555565443
No 94
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.95 E-value=1.1e-27 Score=222.19 Aligned_cols=211 Identities=23% Similarity=0.250 Sum_probs=170.2
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.|+.+++.+.++++||++|+.+ .++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~----~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~ 78 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVC----GDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARA 78 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEE----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCe
Confidence 4799999999999999999996 568999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------------------c-CC----------C---------------ch----------
Q psy9113 103 VHSIVVSKCSGDDMST----------------------V-PA----------N---------------SE---------- 124 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------------------~-~~----------~---------------~~---------- 124 (281)
+++++++..+.+++.+ . +. . +.
T Consensus 79 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (533)
T PRK07798 79 VPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSPERDF 158 (533)
T ss_pred EEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCCcCCC
Confidence 9999999988877766 0 00 0 00
Q ss_pred -hhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhh---------hccC------CCCCEEEEeCchhhhhhHhHH
Q psy9113 125 -RERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKY---------VFDY------KPGDIYWCTADVGWITGHTYV 187 (281)
Q Consensus 125 -~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~---------~~~~------~~~~~~l~~~pl~h~~gl~~~ 187 (281)
...++.+ ++|||||||.||+|+++|+++.. ....... ...+ ..+++++...|++|..|+. .
T Consensus 159 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~-~ 236 (533)
T PRK07798 159 GERSPDDLYLLYTGGTTGMPKGVMWRQEDIFR-VLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQW-A 236 (533)
T ss_pred CCCCCCceEEEECCCCCCCCcEEEEecHHHHH-HHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHH-H
Confidence 0012346 99999999999999999999876 3322111 1111 5678899999999999985 7
Q ss_pred HHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhc
Q psy9113 188 VYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLN 245 (281)
Q Consensus 188 ~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~ 245 (281)
++.+++.|+++++. +.. .+++..+++.++++++|.+. ..|+.+...+++.+.
T Consensus 237 ~~~~l~~G~~~~~~--~~~--~~~~~~~~~~i~~~~~t~~~--~~~~~~~~~l~~~~~ 288 (533)
T PRK07798 237 AFAALFSGQTVVLL--PDV--RFDADEVWRTIEREKVNVIT--IVGDAMARPLLDALE 288 (533)
T ss_pred HHHHHhcCceEEEe--cCC--CcCHHHHHHHHHHhCCeEEE--echHHHHHHHHHHhc
Confidence 89999999999999 421 57899999999999999955 344444445555554
No 95
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=1.1e-27 Score=224.20 Aligned_cols=208 Identities=17% Similarity=0.165 Sum_probs=167.2
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKS-KGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
.|+.+.|++.++.+|+++|+++ .++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||+++|
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~----~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~G 99 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSN----LGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAG 99 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEE----CCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 4899999999999999999984 45799999999999999999997 599999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC----------c-------------C-----------C--------------------------
Q psy9113 102 AVHSIVVSKCSGDDMST----------V-------------P-----------A-------------------------- 121 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~----------~-------------~-----------~-------------------------- 121 (281)
++++|+++..+.+++.+ + . .
T Consensus 100 a~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 100 LIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred eEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhcccccccc
Confidence 99999999887655432 0 0 0
Q ss_pred ---------------------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhcc--CC-CCCEEEEeC
Q psy9113 122 ---------------------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFD--YK-PGDIYWCTA 176 (281)
Q Consensus 122 ---------------------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~--~~-~~~~~l~~~ 176 (281)
......++++ ++|||||||.||||+++|+++.. ........++ +. ..+++++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK05677 180 HLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVA-NMLQCRALMGSNLNEGCEILIAPL 258 (562)
T ss_pred CCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHH-HHHHHHHHhccCCCCCccEEEEcC
Confidence 0001135677 99999999999999999999887 4443333332 33 346889999
Q ss_pred chhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 177 DVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 177 pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
|++|.+|+...++.++..|++.++. +. ..+++.+++.++++++|.++ ..|.++..++..
T Consensus 259 pl~h~~~~~~~~~~~~~~g~~~~~~--~~---~~~~~~~~~~i~~~~~t~~~---~~p~~~~~l~~~ 317 (562)
T PRK05677 259 PLYHIYAFTFHCMAMMLIGNHNILI--SN---PRDLPAMVKELGKWKFSGFV---GLNTLFVALCNN 317 (562)
T ss_pred cHHHHHHHHHHHHHHHHcCCeEEEe--cC---cccHHHHHHHHHHcCceEEe---cHHHHHHHHHhC
Confidence 9999999877888889999988877 42 46788999999999999965 444445555543
No 96
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.95 E-value=1.6e-27 Score=222.15 Aligned_cols=212 Identities=15% Similarity=0.090 Sum_probs=170.6
Q ss_pred ecccc----ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHH
Q psy9113 17 DTFWQ----TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVV 92 (281)
Q Consensus 17 ~~~~~----~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~ 92 (281)
...|+ ..|+.+++.+.++.+|+++|+.+ .++.+||.||.++++++|..|.+.|+.+|++|+++++|+.++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~----~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~ 86 (541)
T TIGR03205 11 GVRWDATIARGTLPDLLSKAAADYGPRPALEF----RDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPI 86 (541)
T ss_pred CCCcccCCCCCCHHHHHHHHHHHcCCCceEEE----CCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHH
Confidence 36677 66999999999999999999985 45789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCeEEEeecCCCCCCcCC-----------cC-------------------------C-------------C-
Q psy9113 93 TMLACARIGAVHSIVVSKCSGDDMST-----------VP-------------------------A-------------N- 122 (281)
Q Consensus 93 ~~lA~~~~G~~~v~l~~~~~~~~~~~-----------~~-------------------------~-------------~- 122 (281)
+++||+++|++++|+++..+.+++.+ .. . .
T Consensus 87 ~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (541)
T TIGR03205 87 NFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPA 166 (541)
T ss_pred HHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCC
Confidence 99999999999999999766544433 00 0 0
Q ss_pred --------------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhh-----hccCCCCCEEEEeC
Q psy9113 123 --------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKY-----VFDYKPGDIYWCTA 176 (281)
Q Consensus 123 --------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~-----~~~~~~~~~~l~~~ 176 (281)
.....++++ ++|||||||.||+|+++|+++.. ....... .......++++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ 245 (541)
T TIGR03205 167 DPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTS-AVSIYDVWGKPSRATRGDVERVICVL 245 (541)
T ss_pred CcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHH-HHHHHHhhcccccccCCCCceEEEec
Confidence 001224667 99999999999999999999876 3322111 11223357899999
Q ss_pred chhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 177 DVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 177 pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
|++|.+|+...++.++..|+++++. + .++++.+++.++++++|.+. .+|.++..+++
T Consensus 246 p~~~~~~~~~~~~~~l~~g~~~~~~--~----~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~ 302 (541)
T TIGR03205 246 PLFHIYALTVILLRSLRRGDLISLH--Q----RFDVAAVFRDIEEKRATVFP---GVPTMWIALAN 302 (541)
T ss_pred cHHHHHHHHHHHHHHHhcCCEEEec--C----CCCHHHHHHHHHHcCCeEee---chHHHHHHHHh
Confidence 9999999887788999999998887 4 57899999999999999966 45555555554
No 97
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=2.5e-27 Score=221.75 Aligned_cols=226 Identities=19% Similarity=0.157 Sum_probs=175.0
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
+++.+.+.+.++.+|+++|+++ .++.+||+||++++.++|+.|.+.|+++||+|+++++|+.+++++++||+++|+
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~----~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 99 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHF----LGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGG 99 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEe----cCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCe
Confidence 5789999999999999999985 567899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC------------cC----------------------------CC--------------------
Q psy9113 103 VHSIVVSKCSGDDMST------------VP----------------------------AN-------------------- 122 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~------------~~----------------------------~~-------------------- 122 (281)
+++|++|..+.+++.+ .+ .+
T Consensus 100 ~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 100 IVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred EEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhccccccccccc
Confidence 9999999877655433 00 00
Q ss_pred ---------c------------hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCC-CCCEEEEeCchh
Q psy9113 123 ---------S------------ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYK-PGDIYWCTADVG 179 (281)
Q Consensus 123 ---------~------------~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~~~~~l~~~pl~ 179 (281)
. ....++++ ++|||||||.||+|.++|+++............+.. .++++++.+|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 259 (563)
T PRK06710 180 ESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFF 259 (563)
T ss_pred ccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchH
Confidence 0 00124667 999999999999999999998752222222223333 356889999999
Q ss_pred hhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhh
Q psy9113 180 WITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLM 259 (281)
Q Consensus 180 h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~ 259 (281)
|.+|+...++.++..|+++++. + .++++.+++.++++++|.+. .+|.++..+++.... ...++++++
T Consensus 260 ~~~g~~~~~~~~l~~G~~~~~~--~----~~~~~~~~~~i~~~~~t~~~---~~P~~~~~l~~~~~~----~~~~~~~lr 326 (563)
T PRK06710 260 HVYGMTAVMNLSIMQGYKMVLI--P----KFDMKMVFEAIKKHKVTLFP---GAPTIYIALLNSPLL----KEYDISSIR 326 (563)
T ss_pred HHHHHHHHHHHHHHcCCeEEEc--C----CCCHHHHHHHHHHcCCeEEe---ccHHHHHHHHcCCcc----ccCChhhhh
Confidence 9999876777899999999998 5 57889999999999999966 455555555543322 223445565
Q ss_pred hccCCC
Q psy9113 260 WAGSLD 265 (281)
Q Consensus 260 ~~g~~g 265 (281)
.+...|
T Consensus 327 ~v~~gg 332 (563)
T PRK06710 327 ACISGS 332 (563)
T ss_pred heeeCC
Confidence 544333
No 98
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.95 E-value=3.1e-27 Score=213.23 Aligned_cols=199 Identities=12% Similarity=0.080 Sum_probs=163.6
Q ss_pred CCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC----------
Q psy9113 49 DYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST---------- 118 (281)
Q Consensus 49 ~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~---------- 118 (281)
+++.+||+||.++++++|+.|. .|+++|++|+++++|+++++++++|+.++|++++|+++..+.+++..
T Consensus 5 ~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~ 83 (414)
T PRK08308 5 NDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGL 83 (414)
T ss_pred cCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEE
Confidence 3579999999999999999985 68999999999999999999999999999999999999988775555
Q ss_pred c-CC-------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHH
Q psy9113 119 V-PA-------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVY 189 (281)
Q Consensus 119 ~-~~-------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~ 189 (281)
+ .. ......++++ ++|||||||.||+|+++|+++.. ........++...+++.+..+|++|.+|+...++
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~ 162 (414)
T PRK08308 84 LYGESDFTKLEAVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDR-EIEAYNEALNCEQDETPIVACPVTHSYGLICGVL 162 (414)
T ss_pred EecCcccccccCCCCCCCCceEEEECCCCCCCCcEEEEehHhHHH-HHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHH
Confidence 0 00 0112346778 99999999999999999999988 7776677778888999999999999999888899
Q ss_pred hhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccC
Q psy9113 190 GPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGS 263 (281)
Q Consensus 190 ~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~ 263 (281)
.++..|+++++. + ..+++.+++.++++++|.++ .+|.++..+.+.... ...++.+..+|+
T Consensus 163 ~~l~~G~~~~~~--~----~~~~~~~~~~l~~~~~t~~~---~~P~~~~~l~~~~~~-----~~~l~~~~~~G~ 222 (414)
T PRK08308 163 AALTRGSKPVII--T----NKNPKFALNILRNTPQHILY---AVPLMLHILGRLLPG-----TFQFHAVMTSGT 222 (414)
T ss_pred HHHHcCCEEEec--C----CCCHHHHHHHHHHhCCeEEE---cCHHHHHHHHhcCCc-----cccccEEEEccC
Confidence 999999999998 4 57899999999999999976 556666665544321 124555555554
No 99
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.95 E-value=2.7e-27 Score=220.70 Aligned_cols=208 Identities=18% Similarity=0.220 Sum_probs=169.2
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
++++.+.+.+.++.+|+++|+.+ .+..+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~a~~~----~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 92 (545)
T PRK08162 17 PLTPLSFLERAAEVYPDRPAVIH----GDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAG 92 (545)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEE----CCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhC
Confidence 57889999999999999999985 45789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC--------------------------cCCC--------c------------------------
Q psy9113 102 AVHSIVVSKCSGDDMST--------------------------VPAN--------S------------------------ 123 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~--------------------------~~~~--------~------------------------ 123 (281)
++++|+++..+.+++.. .+.. .
T Consensus 93 ~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (545)
T PRK08162 93 AVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDPD 172 (545)
T ss_pred cEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCcc
Confidence 99999999987766655 0000 0
Q ss_pred -----hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCce
Q psy9113 124 -----ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGAT 197 (281)
Q Consensus 124 -----~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~ 197 (281)
..+.++++ ++|||||||.||||+++|+++.. .........++..+++.+..+|++|.+|+...++.++. |+.
T Consensus 173 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~-~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~-~g~ 250 (545)
T PRK08162 173 FAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYL-NALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAAR-AGT 250 (545)
T ss_pred ccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHH-HHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHH-ccE
Confidence 00012567 99999999999999999998776 44444555677888999999999999987655555554 555
Q ss_pred EEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 198 SVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 198 ~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
.++. . .++++.+++.++++++|++. .+|.++..+++..
T Consensus 251 ~~~~--~----~~~~~~~~~~l~~~~~t~~~---~~P~~~~~l~~~~ 288 (545)
T PRK08162 251 NVCL--R----KVDPKLIFDLIREHGVTHYC---GAPIVLSALINAP 288 (545)
T ss_pred EEEe--C----CCCHHHHHHHHHHcCCeEEE---echHHHHHHHhCc
Confidence 5555 2 67999999999999999977 6666667766543
No 100
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.95 E-value=4.9e-27 Score=217.16 Aligned_cols=205 Identities=20% Similarity=0.229 Sum_probs=168.4
Q ss_pred hhhhccC-CCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeE
Q psy9113 26 GHVLTPL-PGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVH 104 (281)
Q Consensus 26 ~~~l~~~-a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~ 104 (281)
.+++.+. ++.+||++|+++ .++.+||.|+.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|+++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~----~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~ 82 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFID----DISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVP 82 (508)
T ss_pred HHHHHHHHhcccCCceEEEe----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 4556665 677999999984 56899999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCcCC--------------------------cCC-----------------------------Cchhhhcc
Q psy9113 105 SIVVSKCSGDDMST--------------------------VPA-----------------------------NSERERKL 129 (281)
Q Consensus 105 v~l~~~~~~~~~~~--------------------------~~~-----------------------------~~~~~~~~ 129 (281)
+|+++..+.+++.+ .+. ......++
T Consensus 83 v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (508)
T TIGR02262 83 VALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATESEQFKPAATQADD 162 (508)
T ss_pred eeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCCCccCCCCCCCCC
Confidence 99999877766654 000 00112356
Q ss_pred cc-eeeeecCCCCCceEEEechhHHHHHHHh-hhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCcc
Q psy9113 130 KL-RKVVTGSTGKPKGVLHTTGGYLLYAATT-HKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEI 207 (281)
Q Consensus 130 ~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~ 207 (281)
++ ++|||||||.||+|.++|+++.. .... ....++++++|+++..+|++|.+++...++.++..|+++++. +.
T Consensus 163 ~a~i~~TSGTTG~PK~v~~s~~~~~~-~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~--~~-- 237 (508)
T TIGR02262 163 PAFWLYSSGSTGMPKGVVHTHSNPYW-TAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLM--GE-- 237 (508)
T ss_pred cEEEEeCCCCCCCCcEEEEechhHHH-HHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEe--CC--
Confidence 77 99999999999999999999987 4443 445668889999999999999999877888899999999998 53
Q ss_pred ccccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 208 YWCTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 208 ~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
.+++..+++.++++++|.++ ..|.++..++..
T Consensus 238 -~~~~~~~~~~i~~~~~t~~~---~~P~~~~~~~~~ 269 (508)
T TIGR02262 238 -RPTPDAVFDRLRRHQPTIFY---GVPTLYAAMLAD 269 (508)
T ss_pred -CCCHHHHHHHHHHHCCcEEe---cchHHHHHHhcC
Confidence 46889999999999999966 334455554443
No 101
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.95 E-value=3.6e-27 Score=215.41 Aligned_cols=216 Identities=16% Similarity=0.119 Sum_probs=168.5
Q ss_pred chhhhh-ccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 24 TGGHVL-TPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 24 tl~~~l-~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
++.+.+ ..+++.+|+++|+.+ +++.+||+||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~----~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~ 78 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRL----NDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGA 78 (458)
T ss_pred hhhcChHHHHHHhCCCceeeec----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence 444444 444788999999984 578999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------c---------------------CCCchhhhcccc-eeeeecCCCCCceEEEech
Q psy9113 103 VHSIVVSKCSGDDMST----------V---------------------PANSERERKLKL-RKVVTGSTGKPKGVLHTTG 150 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------~---------------------~~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~ 150 (281)
+++|+++..+.+++.. + ........++++ ++|||||||.||+|.++|+
T Consensus 79 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~ 158 (458)
T PRK09029 79 RVLPLNPQLPQPLLEELLPSLTLDFALVLEGENTFSALTSLHLQLVEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQ 158 (458)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccchhhccccccccccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHH
Confidence 9999999998776554 0 000111235678 9999999999999999999
Q ss_pred hHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccC
Q psy9113 151 GYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLAN 230 (281)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 230 (281)
++.. ........++..++++++..+|++|.+|+. .++.+|..|+++++. +. ..+++.++ ++|.+.
T Consensus 159 ~~~~-~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~-~~~~~l~~G~~v~~~--~~-------~~~~~~i~--~~t~~~-- 223 (458)
T PRK09029 159 AHLA-SAEGVLSLMPFTAQDSWLLSLPLFHVSGQG-IVWRWLYAGATLVVR--DK-------QPLEQALA--GCTHAS-- 223 (458)
T ss_pred HHHH-HHHHHhhcCCCCccceEEEecCcHhhhhhH-HHHHHHhCCceEEeC--Ch-------HHHHHHHh--hceeee--
Confidence 9998 777777778889999999999999999974 667889999999988 41 33455553 677754
Q ss_pred CchhHHHHHHHHhhccccccccccchhhhhccCC
Q psy9113 231 GATSVIVSETLKMLNTNFFCILYTISSLMWAGSL 264 (281)
Q Consensus 231 ~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~ 264 (281)
..|.++..++..... ..+++.+..+|+.
T Consensus 224 -~~P~~~~~l~~~~~~-----~~~l~~i~~gG~~ 251 (458)
T PRK09029 224 -LVPTQLWRLLDNRSE-----PLSLKAVLLGGAA 251 (458)
T ss_pred -cChHHHHHHHhcccc-----CCcceEEEECCCC
Confidence 445555565544322 2245555555554
No 102
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.94 E-value=5.4e-27 Score=219.56 Aligned_cols=227 Identities=16% Similarity=0.126 Sum_probs=173.8
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSK-GVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
.+++.+.|.+.++.+|+++|+.+ .++.+||.||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~ 98 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSN----LGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRA 98 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEec----CCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 35899999999999999999984 457999999999999999999985 9999999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC----------c-------------------------------------------------CC
Q psy9113 101 GAVHSIVVSKCSGDDMST----------V-------------------------------------------------PA 121 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~----------~-------------------------------------------------~~ 121 (281)
|++++++++..+.+++.+ + +.
T Consensus 99 G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
T PRK12492 99 GLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPA 178 (562)
T ss_pred CeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccc
Confidence 999999999876443332 0 00
Q ss_pred ----------------------Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhcc---------CCC-
Q psy9113 122 ----------------------NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFD---------YKP- 168 (281)
Q Consensus 122 ----------------------~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~---------~~~- 168 (281)
......++++ ++|||||||.||+|+++|+++.. ........+. +..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 257 (562)
T PRK12492 179 YHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVA-NMLQVRACLSQLGPDGQPLMKEG 257 (562)
T ss_pred cCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHH-HHHHHHHHHhcccccccccccCC
Confidence 0001224677 99999999999999999999876 4443333221 222
Q ss_pred CCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcccc
Q psy9113 169 GDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNF 248 (281)
Q Consensus 169 ~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~ 248 (281)
+++++..+|++|.+|+...++..+..|.++++. +. ..++..+++.++++++|+++ ..|.++..+++....
T Consensus 258 ~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~--~~---~~~~~~~~~~i~~~~~t~~~---~~p~~~~~l~~~~~~-- 327 (562)
T PRK12492 258 QEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLI--TN---PRDIPGFIKELGKWRFSALL---GLNTLFVALMDHPGF-- 327 (562)
T ss_pred CeEEEEecchHHHHHHHHHHHHHhhcCceEEEe--cC---CcCHHHHHHHHHHhCCceee---CcHHHHHHHHhCcCc--
Confidence 357789999999999877778888899988777 31 45788999999999999966 455555666554332
Q ss_pred ccccccchhhhhccCCC
Q psy9113 249 FCILYTISSLMWAGSLD 265 (281)
Q Consensus 249 ~~~~~~L~sl~~~g~~g 265 (281)
...++++++.+...|
T Consensus 328 --~~~~~~~lr~~~~gG 342 (562)
T PRK12492 328 --KDLDFSALKLTNSGG 342 (562)
T ss_pred --ccccccceeEEEecc
Confidence 234455666554444
No 103
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.94 E-value=5.1e-27 Score=219.46 Aligned_cols=228 Identities=19% Similarity=0.106 Sum_probs=175.2
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
..++.++|.+.++.+|+++|+++ .++.+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 22 ~~~i~~~l~~~a~~~p~~~a~~~----~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G 97 (557)
T PRK07059 22 YPSLADLLEESFRQYADRPAFIC----MGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAG 97 (557)
T ss_pred CCCHHHHHHHHHHHcCCCceEEE----cCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 45899999999999999999985 46799999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC----------c----------------C-----------------------------------
Q psy9113 102 AVHSIVVSKCSGDDMST----------V----------------P----------------------------------- 120 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~----------~----------------~----------------------------------- 120 (281)
++++|+++..+.+++.+ + .
T Consensus 98 ~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (557)
T PRK07059 98 YVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWS 177 (557)
T ss_pred eEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccccC
Confidence 99999999876554433 0 0
Q ss_pred ------------------C-Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhc----cC---CCCCEEE
Q psy9113 121 ------------------A-NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVF----DY---KPGDIYW 173 (281)
Q Consensus 121 ------------------~-~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~----~~---~~~~~~l 173 (281)
. ......++++ ++|||||||.||+|+++|.++.. ......... .. .....++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (557)
T PRK07059 178 LPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVA-NVLQMEAWLQPAFEKKPRPDQLNFV 256 (557)
T ss_pred CCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHH-HHHHHhhhhcccccccCCCCCcEEE
Confidence 0 0011235677 99999999999999999999876 433222111 11 1235678
Q ss_pred EeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccc
Q psy9113 174 CTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILY 253 (281)
Q Consensus 174 ~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 253 (281)
..+|++|.+++....+.++..|++.++. ++ ..++..+++.++++++|.+. .++.++..+++.... ...
T Consensus 257 ~~~pl~~~~~~~~~~~~~~~~g~~~~~~--~~---~~~~~~~~~~i~~~~vt~~~---~~p~~~~~l~~~~~~----~~~ 324 (557)
T PRK07059 257 CALPLYHIFALTVCGLLGMRTGGRNILI--PN---PRDIPGFIKELKKYQVHIFP---AVNTLYNALLNNPDF----DKL 324 (557)
T ss_pred EeCCcHHHHHHHHHHHHHHhhcceEEEe--cC---CcCHHHHHHHHHHhCCeeee---cCHHHHHHHHcCcCc----CcC
Confidence 8999999998777778889999998887 42 35788899999999999965 555556666654432 233
Q ss_pred cchhhhhccCCCc
Q psy9113 254 TISSLMWAGSLDI 266 (281)
Q Consensus 254 ~L~sl~~~g~~g~ 266 (281)
++++++.+...|.
T Consensus 325 ~~~~l~~~~~gg~ 337 (557)
T PRK07059 325 DFSKLIVANGGGM 337 (557)
T ss_pred CchhheEEEeccc
Confidence 5556665544443
No 104
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.94 E-value=7.7e-27 Score=214.00 Aligned_cols=191 Identities=15% Similarity=0.075 Sum_probs=161.3
Q ss_pred CCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCC
Q psy9113 33 PGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCS 112 (281)
Q Consensus 33 a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~ 112 (281)
+++.++++|+++ +++.+||+||.++++++|..|+ ++|+|+++++|+++++++++||+++|++++|+++..+
T Consensus 10 ~~~~~~~~a~~~----~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~ 80 (471)
T PRK07787 10 AAAADIADAVRI----GGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSG 80 (471)
T ss_pred hcccCCceEEEe----CCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCC
Confidence 346689999985 5789999999999999999985 5799999999999999999999999999999999988
Q ss_pred CCCcCC----------cC--------------------C--Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHh
Q psy9113 113 GDDMST----------VP--------------------A--NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATT 159 (281)
Q Consensus 113 ~~~~~~----------~~--------------------~--~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 159 (281)
.+++.+ +. + ......++++ ++|||||||.||+|+++|+++.. ....
T Consensus 81 ~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~-~~~~ 159 (471)
T PRK07787 81 VAERRHILADSGAQAWLGPAPDDPAGLPHVPVRLHARSWHRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAA-DLDA 159 (471)
T ss_pred hHHHHHHHHhcCCCEEEecCCcccccccceeeeccccccccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHH-HHHH
Confidence 776655 00 0 0012235778 99999999999999999999988 6666
Q ss_pred hhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHH
Q psy9113 160 HKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSE 239 (281)
Q Consensus 160 ~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ 239 (281)
....++..++++++..+|++|..|+...++.++..|+++++. + ..+++.+++.++ +++|++. .+|.++..
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~--~----~~~~~~~~~~i~-~~~t~~~---~~P~~~~~ 229 (471)
T PRK07787 160 LAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHT--G----RPTPEAYAQALS-EGGTLYF---GVPTVWSR 229 (471)
T ss_pred HHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEec--C----CCCHHHHHHHHh-hCceEEE---cchHHHHH
Confidence 667778889999999999999999988899999999999988 4 578999999999 9999966 55555666
Q ss_pred HHHh
Q psy9113 240 TLKM 243 (281)
Q Consensus 240 ll~~ 243 (281)
+++.
T Consensus 230 l~~~ 233 (471)
T PRK07787 230 IAAD 233 (471)
T ss_pred HHhC
Confidence 6653
No 105
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.94 E-value=1.1e-26 Score=214.33 Aligned_cols=200 Identities=20% Similarity=0.228 Sum_probs=156.3
Q ss_pred ccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeec
Q psy9113 30 TPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVS 109 (281)
Q Consensus 30 ~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~ 109 (281)
..+|+.+|+++|+.+. ++++.+||+||.++++++|+.|.++|+++||+|+++++|+++++++++||+++|++++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~--~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 4 GTHAQIAPDRPAVIVA--ETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINH 81 (501)
T ss_pred chhhhhCCCCcEEEec--CCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecccc
Confidence 4566789999999853 34688999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCC----------------------c----C--------------C-----C---chhhhcccc-eeeeecCCC
Q psy9113 110 KCSGDDMST----------------------V----P--------------A-----N---SERERKLKL-RKVVTGSTG 140 (281)
Q Consensus 110 ~~~~~~~~~----------------------~----~--------------~-----~---~~~~~~~~~-i~~TSGTTG 140 (281)
.++++++.+ . . + . ...+.++.+ ++|||||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG 161 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGFGSFEAALAGAGPRLTEQPCGAVMLYSSGTTG 161 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCcccccccHHHHhcccCCCCCCCcccEEEEeCCCCCC
Confidence 988766654 0 0 0 0 000012347 999999999
Q ss_pred CCceEEEe--chhHHHHHH----HhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccc
Q psy9113 141 KPKGVLHT--TGGYLLYAA----TTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADV 214 (281)
Q Consensus 141 ~PK~v~~s--~~~l~~~~~----~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~ 214 (281)
.||+|+++ |.++.. .. ......+++..+++++..+|++|.+++... ...+..|+++++. + .++++.
T Consensus 162 ~PKgV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~-~~~~~~g~~~~~~--~----~~~~~~ 233 (501)
T PRK13390 162 FPKGIQPDLPGRDVDA-PGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWC-SMVHALGGTVVLA--K----RFDAQA 233 (501)
T ss_pred CCCEEEeecccccccc-chhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHH-HHHHhcCceEEEc--C----CcCHHH
Confidence 99999964 444433 11 112334677889999999999999987543 4466789999888 4 578999
Q ss_pred cceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 215 GWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 215 ~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
+++.++++++|.+. ..|.++..+++
T Consensus 234 ~~~~i~~~~~t~~~---~~P~~~~~l~~ 258 (501)
T PRK13390 234 TLGHVERYRITVTQ---MVPTMFVRLLK 258 (501)
T ss_pred HHHHHHHcCCeEEE---ecHHHHHHHHh
Confidence 99999999999976 45555555554
No 106
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.94 E-value=9.9e-27 Score=217.60 Aligned_cols=226 Identities=15% Similarity=0.064 Sum_probs=174.1
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHH-HCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLK-SKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
.++.++|.+.++.+|+++|+++ .++.+||+||.+++.++|+.|+ +.|+++|++|+++++|+++++++++||.++|
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~----~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 100 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHS----FGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAG 100 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEE----CCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 3688999999999999999985 4679999999999999999997 6899999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC--------------------------cCCC---------------------------------
Q psy9113 102 AVHSIVVSKCSGDDMST--------------------------VPAN--------------------------------- 122 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~--------------------------~~~~--------------------------------- 122 (281)
++++|++|.++.+++.+ .+..
T Consensus 101 ~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08751 101 LTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEY 180 (560)
T ss_pred eEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhcccccc
Confidence 99999999987665544 0000
Q ss_pred ----------------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhcc----CCC-CCEEEE
Q psy9113 123 ----------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFD----YKP-GDIYWC 174 (281)
Q Consensus 123 ----------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~----~~~-~~~~l~ 174 (281)
.....++++ ++|||||||.||+|.++|+++.. .........+ +.+ +++++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 259 (560)
T PRK08751 181 RINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVA-NMQQAHQWLAGTGKLEEGCEVVIT 259 (560)
T ss_pred CCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHH-HHHHHHHhhccccccCCCCceEEE
Confidence 000124567 99999999999999999999887 5444333332 333 357788
Q ss_pred eCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcccccccccc
Q psy9113 175 TADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYT 254 (281)
Q Consensus 175 ~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~ 254 (281)
..|++|.+|+....+.++..|++.++. +. ..++..+++.++++++|.+. .+|.++..+++.... ...+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~---~~~~~~~~~~i~~~~~t~~~---~~p~~~~~l~~~~~~----~~~~ 327 (560)
T PRK08751 260 ALPLYHIFALTANGLVFMKIGGCNHLI--SN---PRDMPGFVKELKKTRFTAFT---GVNTLFNGLLNTPGF----DQID 327 (560)
T ss_pred ecChHHHHHHHHhhhhHhhccceEEEe--cC---cCCHHHHHHHHHhcceeEec---ChHHHHHHHHcCcCc----CCcc
Confidence 899999999876667788888888777 32 46788999999999999965 455555665554332 2345
Q ss_pred chhhhhccCCC
Q psy9113 255 ISSLMWAGSLD 265 (281)
Q Consensus 255 L~sl~~~g~~g 265 (281)
+++++.+...|
T Consensus 328 l~~lr~v~~gG 338 (560)
T PRK08751 328 FSSLKMTLGGG 338 (560)
T ss_pred hhhheeeeeCC
Confidence 56666554444
No 107
>PTZ00297 pantothenate kinase; Provisional
Probab=99.94 E-value=8.4e-27 Score=232.31 Aligned_cols=205 Identities=17% Similarity=0.098 Sum_probs=163.5
Q ss_pred chhhhhccCCCCCCCCCccccC-CCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGN-DPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~-~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
|+.+++.+.++++|+++|+... +.+..+.+||+|+.+++.++|+.|.++|+++||+|+++++|+++|+++++||+.+|+
T Consensus 428 Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~Ga 507 (1452)
T PTZ00297 428 SLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGF 507 (1452)
T ss_pred CHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 8999999999999999998632 123457899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCCcCC---------------------------------cCC----C-----------------------
Q psy9113 103 VHSIVVSKCSGDDMST---------------------------------VPA----N----------------------- 122 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~---------------------------------~~~----~----------------------- 122 (281)
++||+++. .+++.+ ... .
T Consensus 508 V~VPly~t--~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~ 585 (1452)
T PTZ00297 508 TTLPLVGK--GSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGR 585 (1452)
T ss_pred EEEeCCCC--HHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCc
Confidence 99999753 223333 000 0
Q ss_pred -------chhhhcccc-eee---eecCCCCCceEEEechhHHHHHHHhhhhh---ccCCCCCEEEEeCchhhhhhHhHHH
Q psy9113 123 -------SERERKLKL-RKV---VTGSTGKPKGVLHTTGGYLLYAATTHKYV---FDYKPGDIYWCTADVGWITGHTYVV 188 (281)
Q Consensus 123 -------~~~~~~~~~-i~~---TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~gl~~~~ 188 (281)
....+++.+ |+| ||||||.||||++||++++. +....... ....++|++++.+|++|+++.. .+
T Consensus 586 ~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla-~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~-~~ 663 (1452)
T PTZ00297 586 LCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLR-DISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRV-FV 663 (1452)
T ss_pred ccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHH-HHHHHhhhccccCCCCCCEEEEechHHHHHHHH-HH
Confidence 001234666 775 99999999999999999998 66554432 1346789999999999999964 56
Q ss_pred HhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 189 YGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 189 ~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
+.+++.|+++... +++.+++.++++|||+++ .+|.++..+.+..
T Consensus 664 ~~~l~~G~~I~~~---------d~~~lledL~~~rPTv~~---~VPrv~ekI~~~i 707 (1452)
T PTZ00297 664 LGLFAHGSAVATV---------DAAHLQRAFVKFQPTILV---AAPSLFSTSRLQL 707 (1452)
T ss_pred HHHHHcCCEEEeC---------CHHHHHHHHHHHCCEEEE---ecHHHHHHHHHHH
Confidence 7889999998543 678999999999999976 5556666665554
No 108
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=6.5e-27 Score=235.16 Aligned_cols=208 Identities=19% Similarity=0.156 Sum_probs=170.4
Q ss_pred cchhhhhccCCCCCC-CCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc
Q psy9113 23 ETGGHVLTPLPGCTP-MKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG 101 (281)
Q Consensus 23 ~tl~~~l~~~a~~~p-d~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G 101 (281)
.++.+.+.+.++++| ++.++.+ .+++++||+|+.++++++|+.|++ |+++||+|+++++|+++++++++||+++|
T Consensus 631 ~~~~~~l~~~~~~~~~~~~ai~~---~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G 706 (1140)
T PRK06814 631 RTLFEALIEAAKIHGFKKLAVED---PVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAG 706 (1140)
T ss_pred CCHHHHHHHHHHHcCCCCeEeEC---CCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCC
Confidence 456777778888876 4566654 246789999999999999999975 99999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcCC----------------c------------C-------CC--------------------c---
Q psy9113 102 AVHSIVVSKCSGDDMST----------------V------------P-------AN--------------------S--- 123 (281)
Q Consensus 102 ~~~v~l~~~~~~~~~~~----------------~------------~-------~~--------------------~--- 123 (281)
++++|+++..+.+++.+ . + .+ +
T Consensus 707 ~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1140)
T PRK06814 707 RVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFPLVY 786 (1140)
T ss_pred CEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCCccc
Confidence 99999999887666554 0 0 00 0
Q ss_pred --hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEE
Q psy9113 124 --ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVI 200 (281)
Q Consensus 124 --~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~ 200 (281)
....++++ ++|||||||.||||+++|+++.. .........+..++|++++.+|++|.+|+...++.++..|+++++
T Consensus 787 ~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~-~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 787 FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLA-NRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHH-HHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 01235778 99999999999999999999988 777777778889999999999999999987788999999999999
Q ss_pred ecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 201 VSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
. +. ..+.+.+.+.++++++|.++ .+|.++..+.+.
T Consensus 866 ~--~~---~~~~~~~~~~i~~~~~t~~~---~~p~~l~~l~~~ 900 (1140)
T PRK06814 866 Y--PS---PLHYRIIPELIYDTNATILF---GTDTFLNGYARY 900 (1140)
T ss_pred e--cC---cccHHHHHHHHHhcCCEEEE---ecHHHHHHHHhh
Confidence 8 42 34567788899999999977 556666655443
No 109
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.94 E-value=1.3e-26 Score=228.77 Aligned_cols=225 Identities=15% Similarity=0.097 Sum_probs=174.0
Q ss_pred ccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 20 WQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 20 ~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
....|+.+++++.++++||++|+++ .++.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~----~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~ 519 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLF----DGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSR 519 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEe----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 5667899999999999999999985 457899999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEeecCCCCCCcCC-----------------------------cC-----------------C----Cc------
Q psy9113 100 IGAVHSIVVSKCSGDDMST-----------------------------VP-----------------A----NS------ 123 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~-----------------------------~~-----------------~----~~------ 123 (281)
+|++++|++|.. ++.+ .. . ..
T Consensus 520 aGav~vpl~p~~---~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (994)
T PRK07868 520 LGAVAVLMPPDT---DLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVELPG 596 (994)
T ss_pred cCCEEEEeCCch---hHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccccCCcchhhhhhhhcCcccccCCc
Confidence 999999999752 2222 00 0 00
Q ss_pred -----hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCce
Q psy9113 124 -----ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGAT 197 (281)
Q Consensus 124 -----~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~ 197 (281)
....++++ |+|| ||||.||++.++|++... ........+++.++|++++.+|++|.+|+...++.++..|++
T Consensus 597 ~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~-~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~ 674 (994)
T PRK07868 597 WYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWAL-SAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR 674 (994)
T ss_pred ccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHH-HHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE
Confidence 00125667 9998 688888888888876654 333444556788899999999999999987666666777777
Q ss_pred EEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 198 SVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 198 ~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
+++. + .++++.+++.|+++++|+++ .+|.++..+++.... ...++++++.+...|.
T Consensus 675 vvl~--~----~~~~~~~~~~I~~~~vT~~~---~~Ps~l~~L~~~~~~----~~~~~~slr~~~g~gl 730 (994)
T PRK07868 675 IALS--R----GLDPDRFVQEVRQYGVTVVS---YTWAMLREVVDDPAF----VLHGNHPVRLFIGSGM 730 (994)
T ss_pred EEec--C----CCCHHHHHHHHHHhCCcEEE---eHHHHHHHHHhCcCC----ccCCCCceEEEecCCC
Confidence 6666 4 57999999999999999977 666667776664322 2234556665544443
No 110
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.94 E-value=3.8e-26 Score=211.37 Aligned_cols=202 Identities=20% Similarity=0.243 Sum_probs=160.6
Q ss_pred ccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeec
Q psy9113 30 TPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVS 109 (281)
Q Consensus 30 ~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~ 109 (281)
...++.+||++|+++. .+++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~--~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 4 GIHAQTTPDKPAVIMA--STGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred hhhHhhCCCceEEEec--CCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccc
Confidence 3567789999998853 34678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCC--------------------------cC-------CC---------------------chhhhcccc-eee
Q psy9113 110 KCSGDDMST--------------------------VP-------AN---------------------SERERKLKL-RKV 134 (281)
Q Consensus 110 ~~~~~~~~~--------------------------~~-------~~---------------------~~~~~~~~~-i~~ 134 (281)
..+.+++.+ .+ .. .....++.+ ++|
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~ 161 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLPATPIADESLGTDMLY 161 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCCCCCCCCcccccEEEE
Confidence 887776655 00 00 000112346 999
Q ss_pred eecCCCCCceEEEe--chhHHHH--HHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccc
Q psy9113 135 VTGSTGKPKGVLHT--TGGYLLY--AATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWC 210 (281)
Q Consensus 135 TSGTTG~PK~v~~s--~~~l~~~--~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~ 210 (281)
||||||.||+|.++ |.++... ........+++.++++++...|++|.+|+. ..+.++..|+++++. + .+
T Consensus 162 TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g~~~~~~--~----~~ 234 (511)
T PRK13391 162 SSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLGGTVIVM--E----HF 234 (511)
T ss_pred CCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcCceEEEC--C----CC
Confidence 99999999999965 5554320 223344556778889999999999999875 668899999999998 4 67
Q ss_pred cccccceeeeeeccceeccCCchhHHHHHHHHh
Q psy9113 211 TADVGWITGHTYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 211 ~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
+++.+++.++++++|++. .+|.++..++..
T Consensus 235 ~~~~~~~~i~~~~~t~~~---~~p~~~~~l~~~ 264 (511)
T PRK13391 235 DAEQYLALIEEYGVTHTQ---LVPTMFSRMLKL 264 (511)
T ss_pred CHHHHHHHHHHhCCeEEE---ehHHHHHHHHhC
Confidence 899999999999999976 555555555543
No 111
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.94 E-value=4.7e-26 Score=213.05 Aligned_cols=210 Identities=16% Similarity=0.124 Sum_probs=167.3
Q ss_pred ccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCcHHHHHHHHHHHHh
Q psy9113 22 TETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKS-KGVQKGDRVAIYLPMVLEIVVTMLACARI 100 (281)
Q Consensus 22 ~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n~~~~~~~~lA~~~~ 100 (281)
..++.+++++.++.+|+++|+.+ .++.+||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~----~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 97 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFIN----MGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRA 97 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEE----CCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 34799999999999999999985 46799999999999999999984 89999999999999999999999999999
Q ss_pred cCeEEEeecCCCCCCcCC----------c--C------------------------------------------------
Q psy9113 101 GAVHSIVVSKCSGDDMST----------V--P------------------------------------------------ 120 (281)
Q Consensus 101 G~~~v~l~~~~~~~~~~~----------~--~------------------------------------------------ 120 (281)
|++++|+++..+.+++.+ + +
T Consensus 98 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08974 98 GMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPK 177 (560)
T ss_pred CcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhccccccc
Confidence 999999999876554433 0 0
Q ss_pred --CC-------------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhc---cCCCCCEEEEe
Q psy9113 121 --AN-------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVF---DYKPGDIYWCT 175 (281)
Q Consensus 121 --~~-------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~~l~~ 175 (281)
.+ .....++++ ++|||||||.||+|.++|.++.. ........+ ....++.++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08974 178 YHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLA-NLEQAKAAYGPLLHPGKELVVTA 256 (560)
T ss_pred ccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHH-HHHHHHHhhccccCCCccEEEEe
Confidence 00 001235677 99999999999999999999887 443322222 23446788899
Q ss_pred CchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhh
Q psy9113 176 ADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKML 244 (281)
Q Consensus 176 ~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~ 244 (281)
+|++|.+|+....+.++..|+++++. .. ..++..+++.++++++|.+. .+|.++..+++..
T Consensus 257 ~p~~~~~~~~~~~~~~l~~g~~~~~~--~~---~~~~~~~~~~i~~~~~t~~~---~~p~~~~~l~~~~ 317 (560)
T PRK08974 257 LPLYHIFALTVNCLLFIELGGQNLLI--TN---PRDIPGFVKELKKYPFTAIT---GVNTLFNALLNNE 317 (560)
T ss_pred CcHHHHHHHHHHHHHHhhcCCeEEEe--cC---ccCHHHHHHHHHhcCcceEc---CcHHHHHHHHhCc
Confidence 99999999877778888999988877 32 35778889999999999966 5555566666544
No 112
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=9.7e-26 Score=186.85 Aligned_cols=176 Identities=22% Similarity=0.171 Sum_probs=141.0
Q ss_pred hccCCCCCCCCCccccC-CCC-CCeeeeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEE
Q psy9113 29 LTPLPGCTPMKPGAAGN-DPD-DYSRLTYKKLLEEVCKCANVLKS-KGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHS 105 (281)
Q Consensus 29 l~~~a~~~pd~~a~~~~-~~~-~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v 105 (281)
|...++++|+++|+++. +.. +++++||+|+.++++++|+.|++ .|+++||+|+++++|+++++++++|++++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 45667789999999753 222 45689999999999999999998 7999999999999999999999999999999999
Q ss_pred EeecCC-----CCC------------------------------C-cCC---cC-----C-Cc-hhhhcccc-eeeeecC
Q psy9113 106 IVVSKC-----SGD------------------------------D-MST---VP-----A-NS-ERERKLKL-RKVVTGS 138 (281)
Q Consensus 106 ~l~~~~-----~~~------------------------------~-~~~---~~-----~-~~-~~~~~~~~-i~~TSGT 138 (281)
|++..- ..+ . ... .. . +. ....+|++ ++||||+
T Consensus 82 p~n~s~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~ 161 (227)
T TIGR03089 82 LAGDPDADVVVTGPDRLAAAAGSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW 161 (227)
T ss_pred eCCCCCCCEEEeCcchhhhcccCCceEEEeccccccCCCCCCCCcccchhhhhhccCCCCCCCCCCCCCcceeeeccccc
Confidence 987500 000 0 000 00 0 00 12336888 9999986
Q ss_pred CCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCcccccccccccee
Q psy9113 139 TGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWIT 218 (281)
Q Consensus 139 TG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~ 218 (281)
+|+++.. .. ...+++++|+++ .+|++|.+|+...++.+|..|+++++. + +|+++.+++.
T Consensus 162 ---------~~~~~~~-~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~--~----rFd~~~~l~~ 220 (227)
T TIGR03089 162 ---------TGAELVA-AA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV--T----HPDPARLDQI 220 (227)
T ss_pred ---------cHHHHHH-HH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe--c----CCCHHHHHHH
Confidence 5666655 32 566788999999 999999999988999999999999999 5 8999999999
Q ss_pred eeeeccc
Q psy9113 219 GHTYVVY 225 (281)
Q Consensus 219 i~~~~vt 225 (281)
|++||+|
T Consensus 221 i~~~~vT 227 (227)
T TIGR03089 221 AETERVT 227 (227)
T ss_pred HHhhcCC
Confidence 9999987
No 113
>KOG1175|consensus
Probab=99.93 E-value=1.8e-25 Score=204.19 Aligned_cols=230 Identities=41% Similarity=0.627 Sum_probs=184.7
Q ss_pred hccCCCC-CCCCCccccC--CCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEE
Q psy9113 29 LTPLPGC-TPMKPGAAGN--DPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHS 105 (281)
Q Consensus 29 l~~~a~~-~pd~~a~~~~--~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v 105 (281)
+.+..+. .+|.++.++. +.++...+||.++.+.+.++|+.|...|+++||+|++++|+.++++++++||.++|++.+
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~ 149 (626)
T KOG1175|consen 70 LDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHS 149 (626)
T ss_pred hhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEE
Confidence 3444333 4788887654 344455599999999999999999988999999999999999999999999999999999
Q ss_pred EeecCCCCCCcCC-------------------------------------------------------------------
Q psy9113 106 IVVSKCSGDDMST------------------------------------------------------------------- 118 (281)
Q Consensus 106 ~l~~~~~~~~~~~------------------------------------------------------------------- 118 (281)
++...++++++..
T Consensus 150 ~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~ 229 (626)
T KOG1175|consen 150 SVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASP 229 (626)
T ss_pred EeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCC
Confidence 9999999887776
Q ss_pred cCCCchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCce
Q psy9113 119 VPANSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGAT 197 (281)
Q Consensus 119 ~~~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~ 197 (281)
.......+.+++. |+|||||||.||++.+++....-..+......++++++|+..+.....|+.|.++.++.+|.+|++
T Consensus 230 ~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~ 309 (626)
T KOG1175|consen 230 EHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGAT 309 (626)
T ss_pred CCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcE
Confidence 0001112236888 999999999999999999875554777788889999999999999999999999999999999999
Q ss_pred EEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCcc
Q psy9113 198 SVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDIR 267 (281)
Q Consensus 198 ~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~~ 267 (281)
+++. ++.+ +++..+++.+++|++|.++ +.|..++. +.++..... ..++.++|+.++++|..
T Consensus 310 ~vl~--~g~p--~~~~~~~~~v~k~~it~l~---t~pt~~r~-l~~~~~~~~-~~~~~~sLk~~~S~Gep 370 (626)
T KOG1175|consen 310 VVLY--EGPP--FDPGRIWKILDKYKVTVLY---TAPTAYRL-LRRLGQEDV-TSYSLKSLRTCGSVGEP 370 (626)
T ss_pred EEEE--cCCC--CChhhhhhhHhhcceEEEE---eccHHHHH-HHHhccccc-cccccceEEEEeecCcc
Confidence 9999 6544 4999999999999999976 55555443 344433332 55565677777777763
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.93 E-value=2.8e-25 Score=202.70 Aligned_cols=180 Identities=11% Similarity=0.064 Sum_probs=140.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHCCC-CCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC----------c
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSKGV-QKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST----------V 119 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~g~-~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~----------~ 119 (281)
--+.|+||.++++++|+.|++.|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.+ +
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i 97 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIW 97 (452)
T ss_pred eecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEE
Confidence 357899999999999999999988 57999999999999999999999999999999999999998887 1
Q ss_pred CCC--------------chhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhH
Q psy9113 120 PAN--------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGH 184 (281)
Q Consensus 120 ~~~--------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl 184 (281)
... .....++++ ++|||||||.||||++||+++.. ........++..+ ++.++.+|++|.+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~-~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~ 175 (452)
T PRK07445 98 GLDQLKLSHPPPLPSQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTA-SVQGFQRYFQLQQ-VNSFCVLPLYHVSGL 175 (452)
T ss_pred ecCccccccCCCCCccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHH-HHHHHHHHhcCCC-CceEeccCchhhhhH
Confidence 000 011235667 99999999999999999999887 6665555566654 467889999999998
Q ss_pred hHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 185 TYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 185 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
..++.++..|+++++. +. .+.........+++++.++ .+|.++..+++
T Consensus 176 -~~~~~~l~~G~t~v~~--~~----~~~~~~~~~~~~~~~t~~~---~vP~~l~~l~~ 223 (452)
T PRK07445 176 -MQFMRSFLTGGKLVIL--PY----KRLKSGQELPPNPSDFFLS---LVPTQLQRLLQ 223 (452)
T ss_pred -HHHHHHHHcCCeEEEc--Ch----HhccchhhhhhhcCceEEE---ehHHHHHHHHh
Confidence 4778999999999998 41 1122212233467777765 55556666654
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.93 E-value=2.7e-25 Score=201.49 Aligned_cols=196 Identities=21% Similarity=0.222 Sum_probs=160.5
Q ss_pred eHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC---------------
Q psy9113 54 TYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST--------------- 118 (281)
Q Consensus 54 Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~--------------- 118 (281)
||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 79999999999999999999999999999999999999999999999999999999987665554
Q ss_pred c---------------------CCCchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeC
Q psy9113 119 V---------------------PANSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTA 176 (281)
Q Consensus 119 ~---------------------~~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 176 (281)
. ........++++ ++|||||||.||+|.++|+++.. ........++++++|+++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~-~~~~~~~~~~~~~~d~~~~~~ 159 (436)
T TIGR01923 81 LEEKDFQADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYA-SAVGSKENLGFTEDDNWLLSL 159 (436)
T ss_pred ccccceeecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHH-HHHHHHhhcCCCCCceEEEcc
Confidence 0 000111235677 99999999999999999999988 777777788999999999999
Q ss_pred chhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccch
Q psy9113 177 DVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTIS 256 (281)
Q Consensus 177 pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~ 256 (281)
|++|.+|+ ..++.++..|+++++. + .+ ..+++.++++++|.+. ..|.++..+++.... ..+++
T Consensus 160 ~~~~~~~~-~~~~~~l~~g~~~~~~--~----~~--~~~~~~l~~~~~t~~~---~~P~~l~~l~~~~~~-----~~~l~ 222 (436)
T TIGR01923 160 PLYHISGL-SILFRWLIEGATLRIV--D----KF--NQLLEMIANERVTHIS---LVPTQLNRLLDEGGH-----NENLR 222 (436)
T ss_pred CcHhHHHH-HHHHHHHhcCceEEec--c----hH--HHHHHHHHHhCCeEEE---eHHHHHHHHHhCcCC-----CCceE
Confidence 99999998 4789999999999998 4 23 3889999999999966 555666666654322 14567
Q ss_pred hhhhccCCCcc
Q psy9113 257 SLMWAGSLDIR 267 (281)
Q Consensus 257 sl~~~g~~g~~ 267 (281)
.+..+|+.-..
T Consensus 223 ~~~~~G~~~~~ 233 (436)
T TIGR01923 223 KILLGGSAIPA 233 (436)
T ss_pred EEEECCCCCCH
Confidence 66666665443
No 116
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.92 E-value=2.2e-24 Score=193.71 Aligned_cols=201 Identities=23% Similarity=0.237 Sum_probs=161.2
Q ss_pred eHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC--------------
Q psy9113 54 TYKKLLEEVCKCANVLKS-KGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST-------------- 118 (281)
Q Consensus 54 Ty~~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~-------------- 118 (281)
||+||.+++.++|+.|.+ .|+++||+|+++++|++++++.++||+++|++++|+++..+.+++.+
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 89999999999999999999999999999999999999888776655
Q ss_pred -----c---C------------------C----Cchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCC
Q psy9113 119 -----V---P------------------A----NSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYK 167 (281)
Q Consensus 119 -----~---~------------------~----~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 167 (281)
. . . ......++++ ++|||||||.||+|.++|+++.. ........+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~-~~~~~~~~~~~~ 159 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPLELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVN-LLAWLARRYGLD 159 (408)
T ss_pred chhhhccccCCceEEechhhhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHH-HHHHHHHhcCCC
Confidence 0 0 0 0001135677 99999999999999999999998 777777788888
Q ss_pred CCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccc
Q psy9113 168 PGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTN 247 (281)
Q Consensus 168 ~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~ 247 (281)
+++++++..|++|.+|+ ..++.++..|+++++. +.... ..++.+.+.++++++|.+. .+|.++..+++....
T Consensus 160 ~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~--~~~~~-~~~~~~~~~~~~~~~t~l~---~~p~~~~~l~~~~~~- 231 (408)
T TIGR01733 160 PDDRVLQFASLSFDASV-EEIFGTLLAGATLVVP--PEDEE-RDAALLAALIAEHPVTVLN---LTPSLLALLAAALPP- 231 (408)
T ss_pred CCceEEEecCCccchhH-HHHHHHHhCCCEEEEc--Chhhc-cCHHHHHHHHHHcCceEEE---eCHHHHHHHHHhhhh-
Confidence 99999999999999987 5889999999999998 43221 1478899999999999976 666666666665441
Q ss_pred cccccccchhhhhccCCCc
Q psy9113 248 FFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 248 ~~~~~~~L~sl~~~g~~g~ 266 (281)
....|+.+..+|+.-.
T Consensus 232 ---~~~~l~~v~~~g~~~~ 247 (408)
T TIGR01733 232 ---ALASLRLVILGGEALT 247 (408)
T ss_pred ---cccCceEEEEeCccCC
Confidence 2334555555555433
No 117
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.91 E-value=3.6e-24 Score=197.72 Aligned_cols=207 Identities=20% Similarity=0.185 Sum_probs=156.8
Q ss_pred CCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC---------
Q psy9113 48 DDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST--------- 118 (281)
Q Consensus 48 ~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~--------- 118 (281)
..++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++++|+++..+.+++.+
T Consensus 7 ~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 7 PSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred CCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 46789999999999999999999999999999999999999999999999999999999999876665544
Q ss_pred -----------------cC--CC-------------------------chhhhcccc-eeeeecCCCCCceEEEechhHH
Q psy9113 119 -----------------VP--AN-------------------------SERERKLKL-RKVVTGSTGKPKGVLHTTGGYL 153 (281)
Q Consensus 119 -----------------~~--~~-------------------------~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~ 153 (281)
.+ .. .....++.+ ++|||||||.||+|.++|.++.
T Consensus 87 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~~~~~~ 166 (502)
T PRK08276 87 LIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQPDTPIADETAGADMLYSSGTTGRPKGIKRPLPGLD 166 (502)
T ss_pred EEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcCCCCCCCCCCcceEEEECCCCCCCCceEEEccCCcc
Confidence 00 00 001123457 9999999999999999988765
Q ss_pred HHH-----HHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceec
Q psy9113 154 LYA-----ATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPL 228 (281)
Q Consensus 154 ~~~-----~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~ 228 (281)
... ............++++++..|++|.+++. ..+.++..|+++++. + .++++.+++.++++++|++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~--~----~~~~~~~~~~i~~~~~t~~~ 239 (502)
T PRK08276 167 PDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLR-FGMSALALGGTVVVM--E----KFDAEEALALIERYRVTHSQ 239 (502)
T ss_pred hhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHH-HHHHHHhccceEEEc--C----CCCHHHHHHHHHHhCCeEEE
Confidence 311 11111122234678999999999999975 446799999999988 4 57899999999999999976
Q ss_pred cCCchhHHHHHHHHhhccccccccccchhhhhccCCCc
Q psy9113 229 ANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI 266 (281)
Q Consensus 229 ~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~ 266 (281)
.+|.++..+++...... ..+++++++.+...|.
T Consensus 240 ---~~P~~~~~l~~~~~~~~--~~~~~~~lr~i~~~g~ 272 (502)
T PRK08276 240 ---LVPTMFVRMLKLPEEVR--ARYDVSSLRVAIHAAA 272 (502)
T ss_pred ---ehHHHHHHHHhCccccC--CCCCcccceEEEecCC
Confidence 55556666655432211 3356666765555444
No 118
>KOG1180|consensus
Probab=99.91 E-value=1.1e-23 Score=185.72 Aligned_cols=216 Identities=16% Similarity=0.084 Sum_probs=169.8
Q ss_pred CCceecccccc-chhhhhccCCCCCCCCCccccC-----------C--------CCCCeeeeHHHHHHHHHHHHHHHHHC
Q psy9113 13 CSIVDTFWQTE-TGGHVLTPLPGCTPMKPGAAGN-----------D--------PDDYSRLTYKKLLEEVCKCANVLKSK 72 (281)
Q Consensus 13 ~~~~~~~~~~~-tl~~~l~~~a~~~pd~~a~~~~-----------~--------~~~~~~~Ty~~l~~~~~~la~~L~~~ 72 (281)
-++.+..|+.. |+.+++++.++++.++.++-.. + =++....||.|+.+++..+|.+|.+.
T Consensus 30 ~~L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~l 109 (678)
T KOG1180|consen 30 DGLVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKL 109 (678)
T ss_pred CCccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHh
Confidence 34666666665 9999999999999999885311 1 13457899999999999999999999
Q ss_pred CCCCCCE-EEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC---------------------------------
Q psy9113 73 GVQKGDR-VAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST--------------------------------- 118 (281)
Q Consensus 73 g~~~g~~-V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~--------------------------------- 118 (281)
|++++++ ++++.+.+.+|+.+++||.+.+.++|.+...+..+.+.+
T Consensus 110 G~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~I 189 (678)
T KOG1180|consen 110 GLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHI 189 (678)
T ss_pred CCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEE
Confidence 9998777 999999999999999999999999999999999998888
Q ss_pred ---------------------------------------cCCCchhhhcccc-eeeeecCCCCCceEEEechhHHHHHHH
Q psy9113 119 ---------------------------------------VPANSERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAAT 158 (281)
Q Consensus 119 ---------------------------------------~~~~~~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~ 158 (281)
++ +....++|.+ |+|||||||.||||+++|+|+++ ...
T Consensus 190 I~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~-~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA-~~~ 267 (678)
T KOG1180|consen 190 IYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIP-PHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVA-GVT 267 (678)
T ss_pred EEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCC-CCCCCCCceEEEEEcCCCCCCCceEEEecccHHh-hhh
Confidence 01 1112347888 99999999999999999999999 554
Q ss_pred hhh-hhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccc-ccc---ccccceeeeeeccceeccCCch
Q psy9113 159 THK-YVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIY-WCT---ADVGWITGHTYVVYGPLANGAT 233 (281)
Q Consensus 159 ~~~-~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~-~~~---~~~~~~~i~~~~vt~~~~~~~~ 233 (281)
... ....+.+.|+++.++|+.|++.+... +.++.-|+.+-.. +.... ..+ ...---.+...|+|.+ .++|
T Consensus 268 G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE-~~~ft~G~~iGY~--S~~TLtdts~ki~kg~kGD~~~lkPTiM--~~Vp 342 (678)
T KOG1180|consen 268 GVGENVPELGPKDRYIAYLPLAHILELTAE-LVCFTWGGRIGYS--SPLTLTDTSSKIKKGCKGDLTELKPTIM--AAVP 342 (678)
T ss_pred hhcccCcccCCCceEEEechHHHHHHHHHH-HHHHhhCCEeecC--CcceecccchhhccCCcCccccccchhh--hhhH
Confidence 444 34578999999999999999999766 8899999988776 21000 111 1222345678999994 4455
Q ss_pred hH
Q psy9113 234 SV 235 (281)
Q Consensus 234 ~~ 235 (281)
..
T Consensus 343 AV 344 (678)
T KOG1180|consen 343 AV 344 (678)
T ss_pred HH
Confidence 43
No 119
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.91 E-value=3.5e-24 Score=198.18 Aligned_cols=185 Identities=18% Similarity=0.182 Sum_probs=149.4
Q ss_pred CCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC----------
Q psy9113 49 DYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST---------- 118 (281)
Q Consensus 49 ~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~---------- 118 (281)
.++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++.++||+++|++++++++..+.+++.+
T Consensus 8 ~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 8 GDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 5689999999999999999999999999999999999999999999999999999999999887666654
Q ss_pred -------------cC-------C--C---------------------------------chhhhcccc-eeeeecCCCCC
Q psy9113 119 -------------VP-------A--N---------------------------------SERERKLKL-RKVVTGSTGKP 142 (281)
Q Consensus 119 -------------~~-------~--~---------------------------------~~~~~~~~~-i~~TSGTTG~P 142 (281)
.+ . . .....++++ ++|||||||.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~P 167 (509)
T PRK12406 88 IAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPYDGPPVPQPQSMIYTSGTTGHP 167 (509)
T ss_pred EEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCccCCCCCCCceEEEECCCCCCCC
Confidence 00 0 0 001235677 99999999999
Q ss_pred ceEEEechhHHHH--HHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeee
Q psy9113 143 KGVLHTTGGYLLY--AATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGH 220 (281)
Q Consensus 143 K~v~~s~~~l~~~--~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~ 220 (281)
|+|+++|.+.... ........+++.++++++...|++|..+.... +.++..|+++++. + ..+++.+++.++
T Consensus 168 K~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~~~~~g~~~~~~--~----~~~~~~~~~~l~ 240 (509)
T PRK12406 168 KGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYG-LRAGRLGGVLVLQ--P----RFDPEELLQLIE 240 (509)
T ss_pred ceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHH-HHHHhhheEEEEc--c----CCCHHHHHHHHH
Confidence 9999987654331 22334456778889999999999998887544 5678899999888 4 568999999999
Q ss_pred eeccceeccCCchhHHHHHHHHh
Q psy9113 221 TYVVYGPLANGATSVIVSETLKM 243 (281)
Q Consensus 221 ~~~vt~~~~~~~~~~~~~~ll~~ 243 (281)
++++|.++ ..|.++..++..
T Consensus 241 ~~~~t~~~---~~P~~~~~l~~~ 260 (509)
T PRK12406 241 RHRITHMH---MVPTMFIRLLKL 260 (509)
T ss_pred HcCCeEEE---ccHHHHHHHHhC
Confidence 99999966 555556666553
No 120
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.84 E-value=3.7e-21 Score=177.70 Aligned_cols=170 Identities=22% Similarity=0.208 Sum_probs=127.9
Q ss_pred eCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCcCC-----------c-CC----------------------------C-
Q psy9113 84 LPMVLEIVVTMLACARIGAVHSIVVSKCSGDDMST-----------V-PA----------------------------N- 122 (281)
Q Consensus 84 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~-----------~-~~----------------------------~- 122 (281)
++|+++++++++||+++|++++|+++.++.+++.+ . .. .
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 58999999999999999999999999887776655 0 00 0
Q ss_pred --------------------c--------h-----hhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCC
Q psy9113 123 --------------------S--------E-----RERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKP 168 (281)
Q Consensus 123 --------------------~--------~-----~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 168 (281)
. . .+.++++ |+|||||||.||||++||+++.. ........+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~-~~~~~~~~~~~~~ 159 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLR-CASDGWAHMDIQP 159 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHH-HHHHHHHhcCCCC
Confidence 0 0 0125677 99999999999999999999877 4444445567888
Q ss_pred CCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcccc
Q psy9113 169 GDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNF 248 (281)
Q Consensus 169 ~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~ 248 (281)
+|++++.+|++|..|+ ..++.+|..|+++++. +. .++++.+++.|+++++|++. .+|.++..+++......
T Consensus 160 ~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~--~~---~~~~~~~~~~i~~~~vt~~~---~vP~~~~~l~~~~~~~~ 230 (499)
T PLN03051 160 GDVVCWPTNLGWMMGP-WLLYSAFLNGATLALY--GG---APLGRGFGKFVQDAGVTVLG---LVPSIVKAWRHTGAFAM 230 (499)
T ss_pred CCEEEEccCcceeeeh-HHHHHHHHcCCEEEec--CC---CCCcHHHHHHHHHhCCcEEE---eCHHHHHHHHhcCcccc
Confidence 9999999999999997 4788999999999998 42 35788999999999999976 55555666655332101
Q ss_pred ccccccchhhhhccCCC
Q psy9113 249 FCILYTISSLMWAGSLD 265 (281)
Q Consensus 249 ~~~~~~L~sl~~~g~~g 265 (281)
...++++++.+...|
T Consensus 231 --~~~~~~~Lr~i~~gG 245 (499)
T PLN03051 231 --EGLDWSKLRVFASTG 245 (499)
T ss_pred --ccCCchhheEEEecC
Confidence 234566666544433
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=1.2e-20 Score=179.34 Aligned_cols=236 Identities=19% Similarity=0.158 Sum_probs=188.3
Q ss_pred cchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
.++++.+.+.+...|+++|+.+ ....+||+++..+++++|..|.+.|+.+++.|+++.+.+.++++.++|++++|+
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~----~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~ 302 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVR----GGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGA 302 (642)
T ss_pred chHHHHHHHHHHhCCCceeEec----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCC
Confidence 5799999999999999999985 479999999999999999999999999999999999889999999999999999
Q ss_pred eEEEeecCCCCCCcCC----------------------cC-CC--------c-------hhhhcccc-eeeeecCCCCCc
Q psy9113 103 VHSIVVSKCSGDDMST----------------------VP-AN--------S-------ERERKLKL-RKVVTGSTGKPK 143 (281)
Q Consensus 103 ~~v~l~~~~~~~~~~~----------------------~~-~~--------~-------~~~~~~~~-i~~TSGTTG~PK 143 (281)
.++|+++..+.+.+.+ .+ .. . ....++.+ ++|||||||+||
T Consensus 303 ~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ayiiytsgstg~Pk 382 (642)
T COG1020 303 AYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPGLALDDALSEIPDTDPIPQALLGDALAYIIYTSGSTGQPK 382 (642)
T ss_pred eEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCccccccccccCCccCcccccCCCCCeEEEEEccCCCCCCC
Confidence 9999999998886665 00 00 0 01124566 999999999999
Q ss_pred eEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeec
Q psy9113 144 GVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYV 223 (281)
Q Consensus 144 ~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~ 223 (281)
||+.+|+++.+ ........++...+|+++...++.+.... ..++.++..|+++++. +.. ...++..+.+.+++++
T Consensus 383 gv~~~h~~~~~-~~~~~~~~~~~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~l~~~--~~~-~~~~~~~l~~~~~~~~ 457 (642)
T COG1020 383 GVRIEHRALAN-LLNDAGARFGLDADDRVLALASLSFDASV-FEIFGALLEGARLVLA--PAL-LQVDPAALLELLEAQG 457 (642)
T ss_pred CceecCHHHHH-HHHHHHHhcCCCcccEEeecCCcccchhH-HHHHHHHhCCCEEEec--Ccc-ccCCHHHHHHHHHHcC
Confidence 99999999998 66666667899999999999999887765 6899999999999999 432 3678999999999999
Q ss_pred cceeccCCchhHHHHHHHHhhcccc-ccccccchhhhhccCCCcceee
Q psy9113 224 VYGPLANGATSVIVSETLKMLNTNF-FCILYTISSLMWAGSLDIRMWC 270 (281)
Q Consensus 224 vt~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~L~sl~~~g~~g~~~~~ 270 (281)
+|++. .+|.++..++....... ......++.+..+|+.-.....
T Consensus 458 vt~~~---~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~ 502 (642)
T COG1020 458 ITVLL---LVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALV 502 (642)
T ss_pred CEEEE---ecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHH
Confidence 99965 55555555555522211 1111236777777755444333
No 122
>KOG3628|consensus
Probab=99.70 E-value=2.1e-16 Score=148.71 Aligned_cols=203 Identities=15% Similarity=0.111 Sum_probs=168.4
Q ss_pred cchhhhhccCCCCCCCCCccccC--CCCCCeeeeHHHHHHHHHHHHHHHHHCC-CCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 23 ETGGHVLTPLPGCTPMKPGAAGN--DPDDYSRLTYKKLLEEVCKCANVLKSKG-VQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 23 ~tl~~~l~~~a~~~pd~~a~~~~--~~~~~~~~Ty~~l~~~~~~la~~L~~~g-~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
.++.|+|+..++++||.+|+... ++....++||++|..++.+++..|...+ +++||+|+++++++.|++++++||++
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 58999999999999999998643 3456689999999999999999999774 89999999999999999999999999
Q ss_pred hcCeEEEeecCCCCCCcCC------------------------------------------------cC-----------
Q psy9113 100 IGAVHSIVVSKCSGDDMST------------------------------------------------VP----------- 120 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~------------------------------------------------~~----------- 120 (281)
+|.+++|++|.-...-.+. ++
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~k~~~~~~ 929 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIRKRKKNIK 929 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhhhhhhhhh
Confidence 9999999988654433222 00
Q ss_pred -----CCc-hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhc
Q psy9113 121 -----ANS-ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLA 193 (281)
Q Consensus 121 -----~~~-~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~ 193 (281)
.+. ......++ +-+.--++|.--++..+|.++++ .+........+.+..-++..++++-..|+....+...+
T Consensus 930 k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla-~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcLlgVy 1008 (1363)
T KOG3628|consen 930 KLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLA-FCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCLLGVY 1008 (1363)
T ss_pred ccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHH-HHHHHHHHHccccCCceEEEecCccchhHHHHHHHHHH
Confidence 000 00113455 66666788999999999999999 88888888888888888888888888899999999999
Q ss_pred cCceEEEecCCCccccccccccceeeeeeccceec
Q psy9113 194 NGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPL 228 (281)
Q Consensus 194 ~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~ 228 (281)
.|.+.++. +......++..++..|++||+.-++
T Consensus 1009 sGh~T~Li--~p~~l~nnpsLll~~i~~~kvkDt~ 1041 (1363)
T KOG3628|consen 1009 SGHPTLLI--SPMDLENNPSLLLQIISQYKVKDTY 1041 (1363)
T ss_pred cCCceeec--CHHHhhcCHHHHHHHHhcccccccc
Confidence 99998888 5555778999999999999998866
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.42 E-value=4.2e-13 Score=119.86 Aligned_cols=103 Identities=17% Similarity=0.090 Sum_probs=81.4
Q ss_pred cccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCC--CCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCC
Q psy9113 128 KLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKP--GDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLP 204 (281)
Q Consensus 128 ~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~--~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~ 204 (281)
+..+ ++|||||||.||+|++||+++.. ........+++.. .+++++.+|++|.+|+.+.++.++..|+++++. +
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~--~ 171 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLS-EAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQL--A 171 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHH-HHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEec--C
Confidence 3455 89999999999999999999988 6665566666643 368999999999999878889999999999998 4
Q ss_pred CccccccccccceeeeeeccceeccCCchhHHHHHHHH
Q psy9113 205 GEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLK 242 (281)
Q Consensus 205 ~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~ 242 (281)
.+++..+++.++.+ |.++ .+|.++..+++
T Consensus 172 ----~~~~~~~l~~i~~~--t~~~---~~P~~l~~l~~ 200 (386)
T TIGR02372 172 ----AAPASGIMRHARPG--DLIV---GTPFIWEQLAD 200 (386)
T ss_pred ----CCChHHHHHhhccC--CEEE---ECcHHHHHHHh
Confidence 57788888888754 5544 55666666654
No 124
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.34 E-value=2e-12 Score=114.50 Aligned_cols=93 Identities=14% Similarity=0.051 Sum_probs=74.1
Q ss_pred hcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCC
Q psy9113 127 RKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPG 205 (281)
Q Consensus 127 ~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~ 205 (281)
.++++ ++|||||||.||+|+++|+++.. ........ +...++.+..+|++|.+|+. .++.++..|+++++...+
T Consensus 34 ~~d~a~il~TSGTTG~PKgv~~s~~~l~~-~~~~~~~~--~~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v~~~~~- 108 (358)
T PRK07824 34 DDDVALVVATSGTTGTPKGAMLTAAALTA-SADATHDR--LGGPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPVELDVS- 108 (358)
T ss_pred CCCeEEEEeCCCCCCCCCEEEecHHHHHH-HHHHHHhc--cCCCCeEEEECChHHHHHHH-HHHHHHHcCCeEEecCcC-
Confidence 46788 99999999999999999999987 55443333 33567889999999999974 678899999998884112
Q ss_pred ccccccccccceeeeeeccce
Q psy9113 206 EIYWCTADVGWITGHTYVVYG 226 (281)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~vt~ 226 (281)
..+++..+++.+++++.+.
T Consensus 109 --~~~~~~~~~~~i~~~~~~~ 127 (358)
T PRK07824 109 --AGFDPTALPRAVAELGGGR 127 (358)
T ss_pred --CCcCHHHHHHHHHHhCCCc
Confidence 2578999999999998544
No 125
>KOG1178|consensus
Probab=99.23 E-value=6.1e-12 Score=121.45 Aligned_cols=211 Identities=19% Similarity=0.102 Sum_probs=154.6
Q ss_pred ccccc--chhhhhccCCCCCCCCCccccC----CCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHH
Q psy9113 19 FWQTE--TGGHVLTPLPGCTPMKPGAAGN----DPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVV 92 (281)
Q Consensus 19 ~~~~~--tl~~~l~~~a~~~pd~~a~~~~----~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~ 92 (281)
.|... ++++.+++.+...|.+.+..+- ..+.-..+||++.+...+.+++.|...|...|+.|++++..+.++++
T Consensus 30 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v 109 (1032)
T KOG1178|consen 30 GFEQFMGTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVV 109 (1032)
T ss_pred hhhhhhcchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeee
Confidence 44444 7888899999999999886532 22345789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCeEEEeecCCC----CCCcCC----------------------------------c-------CCCc----
Q psy9113 93 TMLACARIGAVHSIVVSKCS----GDDMST----------------------------------V-------PANS---- 123 (281)
Q Consensus 93 ~~lA~~~~G~~~v~l~~~~~----~~~~~~----------------------------------~-------~~~~---- 123 (281)
..++.+++|..+++++|.++ ++.+.. . ....
T Consensus 110 ~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~~~~f~~~~~~~~~r~ 189 (1032)
T KOG1178|consen 110 SVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETIADSFQMVLHNEDTRE 189 (1032)
T ss_pred eeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhccchhhhhhccCCCcc
Confidence 99999999999999999999 221111 0 0000
Q ss_pred --hhhhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEE
Q psy9113 124 --ERERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVI 200 (281)
Q Consensus 124 --~~~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~ 200 (281)
..-.+..+ +.||||+||.||+|.-+|..+.+ ........++...++++-.....+..- .+..+..+++.....++
T Consensus 190 ~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~-~fdw~~~~f~~t~s~~~~~~~~~~~~d-~i~~~~~~~L~~~~~l~ 267 (1032)
T KOG1178|consen 190 IRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLAN-AFDWMFTTFPPTGSDRFTFKTSVYFDD-TIQKFIGALLFNGNNLL 267 (1032)
T ss_pred eeeecccccceEeecccccccccccchhHHHHHh-hhhhccccCCcCccchhhhhheeeccc-chHHHHhhHhhcCceee
Confidence 00114566 88999999999999999999999 777777778888887753333332221 12344445555555444
Q ss_pred ecCCCccccccccccceeeeeeccceeccCCch
Q psy9113 201 VSLPGEIYWCTADVGWITGHTYVVYGPLANGAT 233 (281)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~ 233 (281)
. |....+.++.++.+.+++|+++..+..++.
T Consensus 268 ~--p~~~~~~~~~~l~~~le~y~i~~~~~~~a~ 298 (1032)
T KOG1178|consen 268 V--PTATIKDTPGQLASTLERYGITVSHLLPAM 298 (1032)
T ss_pred c--ccccCccchhhHHHHHHhhhheeeeechhh
Confidence 4 222224447899999999999998855554
No 126
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.13 E-value=5.4e-11 Score=107.81 Aligned_cols=130 Identities=17% Similarity=0.081 Sum_probs=89.3
Q ss_pred hcccc-eeeeecCCCCCceEEEechhHHHHHHHh---hhhhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEec
Q psy9113 127 RKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATT---HKYVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVS 202 (281)
Q Consensus 127 ~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~ 202 (281)
.++.+ +++||||||.||+|.++|+++.. .... .....+..++|+++...++.+..+....++.++..|++++..
T Consensus 74 ~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~-~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 151 (422)
T TIGR02155 74 REQVVRIHASSGTTGKPTVVGYTQNDIDT-WSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI- 151 (422)
T ss_pred hHHcEEEEECCCCCCCCeEeccCHHHHHH-HHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec-
Confidence 45677 88999999999999999998876 3222 223357888999888776654333333456678889999877
Q ss_pred CCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccc-cccccchhhhhccCCCc
Q psy9113 203 LPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFF-CILYTISSLMWAGSLDI 266 (281)
Q Consensus 203 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~-~~~~~L~sl~~~g~~g~ 266 (281)
+ ..+++.+++.|+++++|+++ ..|+++..+.+....... ....+++.+..+|+...
T Consensus 152 -~----~~~~~~~~~~i~~~~~t~l~---~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~ 208 (422)
T TIGR02155 152 -S----GGQTEKQVQLIQDFKPDIIM---VTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWT 208 (422)
T ss_pred -C----CCCHHHHHHHHHHHCCCEEE---EcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCC
Confidence 4 34678999999999999966 445555566655443221 01235666666676655
No 127
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=98.98 E-value=6.3e-10 Score=101.53 Aligned_cols=129 Identities=14% Similarity=0.083 Sum_probs=86.9
Q ss_pred hhcccc-eeeeecCCCCCceEEEechhHHHHHHHhhhh---hccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEe
Q psy9113 126 ERKLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKY---VFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIV 201 (281)
Q Consensus 126 ~~~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~ 201 (281)
+.++++ +.+||||||.||+|.+||+++.. ....... ..+++++|+++...|..+..|.....+.++..|++++..
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~-~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKR-YAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHH-HHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 345777 89999999999999999999876 3333332 247888999999988887666544456677888887654
Q ss_pred cCCCccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcccccc-ccccchhhhhccCCCc
Q psy9113 202 SLPGEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFC-ILYTISSLMWAGSLDI 266 (281)
Q Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~L~sl~~~g~~g~ 266 (281)
. .....++.+++++++.++ +.|+.+ ..+.+.+...... ....++.+..+|++..
T Consensus 163 --~------~~~~~~~~i~~~~~t~l~--~~ps~l-l~La~~~~~~g~~~~~~~lr~ii~gGE~l~ 217 (445)
T TIGR03335 163 --G------KCTFPIRIIESYRPTGIV--ASVFKL-LRLARRMKAEGIDPAESSIRRLVVGGESFA 217 (445)
T ss_pred --C------chhHHHHHHHHhCCCEEE--ECHHHH-HHHHHHHHHcCCCcccCcceEEEEcCCCCC
Confidence 2 223457889999999954 444433 3444444332210 2245677777777655
No 128
>KOG3628|consensus
Probab=98.46 E-value=4e-07 Score=87.38 Aligned_cols=201 Identities=18% Similarity=0.192 Sum_probs=150.6
Q ss_pred chhhhhccCCCCCCCCCccccC-CCCCCeeeeHHHHHHHHHHHHH-HHHHCCCCCCCEEEEEeCCc--HHHHHHHHHHHH
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGN-DPDDYSRLTYKKLLEEVCKCAN-VLKSKGVQKGDRVAIYLPMV--LEIVVTMLACAR 99 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~-~~~~~~~~Ty~~l~~~~~~la~-~L~~~g~~~g~~V~l~~~n~--~~~~~~~lA~~~ 99 (281)
.+..+++..-..++...|.++- ..+....+||..++.++.+.|+ .|.+.|+.++|+|.++...+ .++++..++|..
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l 174 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFL 174 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccc
Confidence 4555666555666777776543 2334789999999999999999 67778999999999999775 799999999999
Q ss_pred hcCeEEEeecCCCCCCcCC--------------------------------------cCCC--------chhhhcc-cc-
Q psy9113 100 IGAVHSIVVSKCSGDDMST--------------------------------------VPAN--------SERERKL-KL- 131 (281)
Q Consensus 100 ~G~~~v~l~~~~~~~~~~~--------------------------------------~~~~--------~~~~~~~-~~- 131 (281)
.|.+++|+.+..+.+++.. ..+. .....+- ..
T Consensus 175 ~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t~~~k~~~~~~k~~~P~~~~~~~~ 254 (1363)
T KOG3628|consen 175 LGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKTNDFKGNYTKDKIKKPRMQLPYGY 254 (1363)
T ss_pred cceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhcccccceeehhhccCCceeeeeEE
Confidence 9999999988887777755 0000 0000011 34
Q ss_pred eeeeecCCCCCceEEEechhHHHHHHH--------------hh-----hhhccCCCCCEEEEeCchhhhhhHhHHHHhhh
Q psy9113 132 RKVVTGSTGKPKGVLHTTGGYLLYAAT--------------TH-----KYVFDYKPGDIYWCTADVGWITGHTYVVYGPL 192 (281)
Q Consensus 132 i~~TSGTTG~PK~v~~s~~~l~~~~~~--------------~~-----~~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l 192 (281)
|-||++++|.--|+..+|. +...... .. ...++.+.+++++.........|++.+++.++
T Consensus 255 i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~al 333 (1363)
T KOG3628|consen 255 IEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVAL 333 (1363)
T ss_pred EEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhh
Confidence 8899999999999999987 3331110 11 22234556778888888888889999999999
Q ss_pred ccCceEEEecCCCccccccccccceeeeeeccceec
Q psy9113 193 ANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPL 228 (281)
Q Consensus 193 ~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~ 228 (281)
.+|.+.+.. |.+ ....|..+.+.+.+||.+.++
T Consensus 334 fsg~c~i~~--p~~-~l~~pG~~~~l~~k~R~~~~l 366 (1363)
T KOG3628|consen 334 FSGYCTIGC--PKE-VLKPPGLIANLITKYRATWSL 366 (1363)
T ss_pred hcCceeecC--chh-hcCCCcchhhhhccceeEEEe
Confidence 999999999 533 357788999999999999854
No 129
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=97.85 E-value=1.8e-05 Score=70.58 Aligned_cols=135 Identities=14% Similarity=-0.004 Sum_probs=86.1
Q ss_pred cccc-eeeeecCCCCCceEEEechhHHHHHHHhhhh--hccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCC
Q psy9113 128 KLKL-RKVVTGSTGKPKGVLHTTGGYLLYAATTHKY--VFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLP 204 (281)
Q Consensus 128 ~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~--~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~ 204 (281)
++.. +-.||||||+|+-+.+++..+..+....... ..+...+|++.......-..|-....+.+-..|++++-. .
T Consensus 90 ~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~--~ 167 (438)
T COG1541 90 EEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI--S 167 (438)
T ss_pred cceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc--C
Confidence 4555 8899999999999999999877733322222 256677777655544321111112234444467766666 2
Q ss_pred CccccccccccceeeeeeccceeccCCchhHHHHHHHHhhcccc-ccccccchhhhhccCCCcceeeh
Q psy9113 205 GEIYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNF-FCILYTISSLMWAGSLDIRMWCM 271 (281)
Q Consensus 205 ~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~L~sl~~~g~~g~~~~~~ 271 (281)
..+.+.-++.++.+++|++. ++|++...+.+.+.... ......|+.+.+++|+....+.+
T Consensus 168 ----~g~~~~~~~l~~df~~tvI~---~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~ 228 (438)
T COG1541 168 ----GGNTERQLELMKDFKPTVIA---ATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRK 228 (438)
T ss_pred ----CccHHHHHHHHHhcCCcEEE---EChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHH
Confidence 35778888999999999977 55555556666655542 12556677777777777644433
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=95.76 E-value=0.015 Score=52.85 Aligned_cols=126 Identities=7% Similarity=-0.091 Sum_probs=73.1
Q ss_pred eeeeecCCCCCceEEEechhHHHHHHHhhhhh--ccCCCCCEEEEe--CchhhhhhHhHHHHhhhccCce-EEEecCCCc
Q psy9113 132 RKVVTGSTGKPKGVLHTTGGYLLYAATTHKYV--FDYKPGDIYWCT--ADVGWITGHTYVVYGPLANGAT-SVIVSLPGE 206 (281)
Q Consensus 132 i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~l~~--~pl~h~~gl~~~~~~~l~~G~~-~v~~~~~~~ 206 (281)
+..||||||.|-.+..+......+.+...... .+...++++... .+. +.+ ..+.+... +-.. +
T Consensus 104 v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly-------~~~~~~~~~~~~~--~-- 171 (430)
T TIGR02304 104 VGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY-------QSVNNRWISLDFF--D-- 171 (430)
T ss_pred EEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH-------HHHHhccceeeec--C--
Confidence 67899999999999999886655333222222 244454544333 222 212 11111111 1222 2
Q ss_pred cccccccccceeeeeeccceeccCCchhHHHHHHHHhhccccccccccchhhhhccCCCc---ceeehhhcc
Q psy9113 207 IYWCTADVGWITGHTYVVYGPLANGATSVIVSETLKMLNTNFFCILYTISSLMWAGSLDI---RMWCMVLWP 275 (281)
Q Consensus 207 ~~~~~~~~~~~~i~~~~vt~~~~~~~~~~~~~~ll~~~~~~~~~~~~~L~sl~~~g~~g~---~~~~~~l~~ 275 (281)
+..+.+..++.|++++++++. .+|+.+..+.+....... ...++.+..+||... |...+..|.
T Consensus 172 -l~~~~~~~l~~L~~~~P~~L~---g~pS~l~~LA~~~~~~~l--~~~~k~ii~~~E~l~~~~r~~Ie~~fg 237 (430)
T TIGR02304 172 -LLAPFQAHIKRLNQRKPSIIV---APPSVLRALALEVMEGEL--TIKPKKVISVAEVLEPQDRELIRNVFK 237 (430)
T ss_pred -CCcCHHHHHHHHHHhCCCEEE---EcHHHHHHHHHHHHhcCC--CCCceEEEEccCCCCHHHHHHHHHHhC
Confidence 235678899999999999977 556656666665544332 246777777887666 334444554
No 131
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=83.05 E-value=3.5 Score=37.51 Aligned_cols=59 Identities=25% Similarity=0.121 Sum_probs=50.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCc--HHHHHHHHHHHHhcCeEEEeec
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMV--LEIVVTMLACARIGAVHSIVVS 109 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l~~ 109 (281)
-.+|..|...++..+|+.|...|..+||+|..+..-+ ..-.-..+|+.++|+.++|+.+
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~ 168 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG 168 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC
Confidence 4689999999999999999999999999999887722 1226678899999999999987
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=76.30 E-value=11 Score=33.56 Aligned_cols=113 Identities=11% Similarity=-0.114 Sum_probs=53.1
Q ss_pred cccc-eeeeecCCCCCceEEEechhHHHHH---HHhhhhhccCCC-CCEEEEeCchhh---hhhH-hHHHHhhhccCceE
Q psy9113 128 KLKL-RKVVTGSTGKPKGVLHTTGGYLLYA---ATTHKYVFDYKP-GDIYWCTADVGW---ITGH-TYVVYGPLANGATS 198 (281)
Q Consensus 128 ~~~~-i~~TSGTTG~PK~v~~s~~~l~~~~---~~~~~~~~~~~~-~~~~l~~~pl~h---~~gl-~~~~~~~l~~G~~~ 198 (281)
+++. .+-||||||.|--+.+.+..+..+. ........+..+ ...++...|-.. .++. .......+..+..
T Consensus 89 e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~- 167 (365)
T PF04443_consen 89 EEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR- 167 (365)
T ss_pred hhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce-
Confidence 4555 8899999999855555444444311 111222222222 223333334321 1111 1122333444555
Q ss_pred EEecCCCccccccccccceeee----eeccceeccCCchhHHHHHHHHhhcccc
Q psy9113 199 VIVSLPGEIYWCTADVGWITGH----TYVVYGPLANGATSVIVSETLKMLNTNF 248 (281)
Q Consensus 199 v~~~~~~~~~~~~~~~~~~~i~----~~~vt~~~~~~~~~~~~~~ll~~~~~~~ 248 (281)
++. .+ ..++.+.+.+.+. +.++.. +.|.|..+|. ++..++...
T Consensus 168 ~~l--~~--~~ld~~~~~~~L~~~~~~~~pv~--l~Gftf~~~~-~~~~l~~~~ 214 (365)
T PF04443_consen 168 FAL--DN--DELDLEGLIEALFRAEHSGEPVL--LFGFTFFIWF-LLDELEERG 214 (365)
T ss_pred eee--cC--CccCHHHHHHHHHHHHhCCCCEE--EECchHHHHH-HHHHHHhcC
Confidence 444 21 1456666666554 344444 6677776654 444555543
No 133
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=68.57 E-value=22 Score=32.58 Aligned_cols=58 Identities=22% Similarity=0.184 Sum_probs=45.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHH--HHHHHHHHHHhcCeEEEee
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLE--IVVTMLACARIGAVHSIVV 108 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~ 108 (281)
..+|.+++...+...+..+...|+.+||++.+..+.+.. .....+++...|+.+++..
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 457899999888888888888899999999998876542 2345577888999887654
No 134
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=64.00 E-value=29 Score=26.08 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=33.7
Q ss_pred HHHHHHHHHCCCCCCCEEEEEeCC---cHHHHHHHHHHHHhcCeEE
Q psy9113 63 CKCANVLKSKGVQKGDRVAIYLPM---VLEIVVTMLACARIGAVHS 105 (281)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~l~~~n---~~~~~~~~lA~~~~G~~~v 105 (281)
..+++.|.+.|+.++++|.+++.. +.....+.+++..+|..-|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 467888888999999999999975 5556666777888887643
No 135
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=63.39 E-value=4.2 Score=38.23 Aligned_cols=26 Identities=19% Similarity=0.069 Sum_probs=21.2
Q ss_pred ccc-eeeeecCCCC-CceEEEechhHHH
Q psy9113 129 LKL-RKVVTGSTGK-PKGVLHTTGGYLL 154 (281)
Q Consensus 129 ~~~-i~~TSGTTG~-PK~v~~s~~~l~~ 154 (281)
.+. ...||||||. ||-+..|.+.+..
T Consensus 81 ~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 81 PPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp --SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 345 8999999999 9999999886655
No 136
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=58.27 E-value=20 Score=30.57 Aligned_cols=53 Identities=15% Similarity=0.178 Sum_probs=42.6
Q ss_pred eeeeHHHHHHH-----HHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 51 SRLTYKKLLEE-----VCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 51 ~~~Ty~~l~~~-----~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
..+.|.++.+. ...+.+.|.+.|+.++++|.++|.++.....+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35667776532 456667778889999999999999999999999999899986
No 137
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=57.02 E-value=24 Score=28.41 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=36.2
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 50 YSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 50 ~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
...+||.++.+.+.++|..+.+.|.+|.-.|++.-+ .++.+-+=|-..|.
T Consensus 4 ~~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRG---G~~pariLsd~L~~ 53 (192)
T COG2236 4 KLYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARG---GLIPARILSDFLGV 53 (192)
T ss_pred eEEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCC---ceehHHHHHHHhCC
Confidence 467999999999999999999999988755555544 33444444444444
No 138
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=54.35 E-value=38 Score=24.20 Aligned_cols=41 Identities=17% Similarity=0.219 Sum_probs=32.5
Q ss_pred HHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 63 CKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
..+...+.+.|+.+++.|.++|.++.....+...+...|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 34556677778888999999999987777777778888874
No 139
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=52.88 E-value=6.6 Score=37.48 Aligned_cols=22 Identities=14% Similarity=0.054 Sum_probs=19.8
Q ss_pred eeeeecCC-CCCceEEEechhHH
Q psy9113 132 RKVVTGST-GKPKGVLHTTGGYL 153 (281)
Q Consensus 132 i~~TSGTT-G~PK~v~~s~~~l~ 153 (281)
..-||||| |++|.+.+|.+.+-
T Consensus 105 f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 105 FLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred hcccCCCCCCceeEEeccHHHHH
Confidence 78999999 89999999997665
No 140
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=50.40 E-value=37 Score=29.62 Aligned_cols=54 Identities=9% Similarity=0.209 Sum_probs=42.5
Q ss_pred eeeHHHHHHH------HHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEE
Q psy9113 52 RLTYKKLLEE------VCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHS 105 (281)
Q Consensus 52 ~~Ty~~l~~~------~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v 105 (281)
.+.|.++.+. ...+...+.+.|+.+++.|.++|.++......++++..+|..-+
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 4666666543 35667777788999999999999999988888999999997533
No 141
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=49.26 E-value=15 Score=24.15 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=18.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSKGVQKGDRVAI 82 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l 82 (281)
+.+.|-+-.=+...+-..|++.|+++||.|-+
T Consensus 31 e~~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 31 ESLRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp GGHHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 33334333444445667788899999999976
No 142
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=48.13 E-value=56 Score=22.70 Aligned_cols=53 Identities=8% Similarity=0.032 Sum_probs=36.8
Q ss_pred eeeeHHHHHHHH----HHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 51 SRLTYKKLLEEV----CKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 51 ~~~Ty~~l~~~~----~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
..+.+.++.+.. ..+...+...+..+++.|.++|.++.....+...+...|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 445566654322 34555666667777889999999988777777777888874
No 143
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=43.84 E-value=31 Score=22.59 Aligned_cols=22 Identities=27% Similarity=0.410 Sum_probs=17.0
Q ss_pred HHHHHHHHHHCCCCCCCEEEEE
Q psy9113 62 VCKCANVLKSKGVQKGDRVAIY 83 (281)
Q Consensus 62 ~~~la~~L~~~g~~~g~~V~l~ 83 (281)
-..+-..|++.|+++||.|-+.
T Consensus 42 ~~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 42 KLGVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HCCHHHHHHHcCCCCCCEEEEc
Confidence 3345666788899999999875
No 144
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=43.60 E-value=18 Score=34.52 Aligned_cols=23 Identities=22% Similarity=0.215 Sum_probs=19.8
Q ss_pred eeeeecCCC-CCceEEEechhHHH
Q psy9113 132 RKVVTGSTG-KPKGVLHTTGGYLL 154 (281)
Q Consensus 132 i~~TSGTTG-~PK~v~~s~~~l~~ 154 (281)
..-|||||| ++|.+..|++.+..
T Consensus 94 F~~SSGTT~g~~K~IP~t~e~l~~ 117 (606)
T PLN02247 94 LLTSSGTSGGQPKLMPSTAEELDR 117 (606)
T ss_pred eeccCCCCCCceeEeeccHHHHHH
Confidence 889999995 89999999886554
No 145
>PF12404 DUF3663: Peptidase ; InterPro: IPR008330 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This family represents the peptidase B group of leucyl aminopeptidases, which are restricted to the gammaproteobacteria. They contain a C-terminal aminopeptidase catalytic domain and an N-terminal domain of unknown function. They are zinc-dependent exopeptidases (3.4.11.1 from EC) and belong to MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF). They selectively release N-terminal amino acid residues from polypeptides and proteins and are involved in the processing, catabolism and degradation of intracellular proteins [, , ]. Leucyl aminopeptidase forms a homohexamer containing two trimers stacked on top of one another []. Each monomer binds two zinc ions. The zinc-binding and catalytic sites are located within the C-terminal catalytic domain []. The same catalytic aminopeptidase domain is found in the other M17 peptidases IPR011356 from INTERPRO. These two groups of aminopeptidases differ by their N-terminal domains. The N-terminal domain in members of IPR011356 from INTERPRO has been implicated in DNA binding [, ] and it is not associated with members of this family which have a different N-terminal domain and therefore are not expected to bind DNA or be involved in transcriptional regulation. In addition, there are related proteins with the same catalytic domain and unique N-terminal sequences unrelated to any of the two N-terminal domains discussed above. For additional information please see [, , , ]. ; GO: 0004177 aminopeptidase activity, 0008235 metalloexopeptidase activity, 0030145 manganese ion binding, 0005737 cytoplasm
Probab=42.41 E-value=82 Score=21.17 Aligned_cols=58 Identities=19% Similarity=0.076 Sum_probs=40.4
Q ss_pred CCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCC-cHHHHHHHH
Q psy9113 35 CTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPM-VLEIVVTML 95 (281)
Q Consensus 35 ~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n-~~~~~~~~l 95 (281)
..+++-.+.+.+.+..-.++=.+-...+++.|+.|...|++ .|.+.++. +.|...+|+
T Consensus 13 ~WG~~AllSf~~~ga~IHl~~~~~l~~IQrAaRkLd~qGI~---~V~L~G~~W~lE~~WAF~ 71 (77)
T PF12404_consen 13 HWGEKALLSFNEQGATIHLSEGDDLRAIQRAARKLDGQGIK---NVALAGEGWDLESQWAFY 71 (77)
T ss_pred HhCcCcEEEEcCCCEEEEECCCcchHHHHHHHHHHhhCCCc---eEEEecCCcCHHHhhHHH
Confidence 44555555555434344556667788999999999999987 89998884 677666554
No 146
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=41.27 E-value=1.1e+02 Score=27.54 Aligned_cols=60 Identities=12% Similarity=0.057 Sum_probs=43.2
Q ss_pred eeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcH--HHHHHHHHHHHhcCeEEEeecCC
Q psy9113 52 RLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVL--EIVVTMLACARIGAVHSIVVSKC 111 (281)
Q Consensus 52 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~ 111 (281)
.+|..++......++..+...|+.+||++....+.+. ......++....|+.++++++..
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 155 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ 155 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC
Confidence 4577787777677777777789999999887665442 22334567888999998887643
No 147
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=41.24 E-value=1.1e+02 Score=24.14 Aligned_cols=51 Identities=4% Similarity=-0.011 Sum_probs=36.8
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 50 YSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 50 ~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
...+||.|+.+.+.++|..+.+. +...+.+.+...++...++..+|-. .|.
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~~-l~~ 64 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLPR-LDF 64 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHHH-cCC
Confidence 67899999999999999999875 2222346666677766666666643 343
No 148
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=37.18 E-value=15 Score=35.07 Aligned_cols=23 Identities=13% Similarity=0.011 Sum_probs=19.9
Q ss_pred eeeeecCCC-CCceEEEechhHHH
Q psy9113 132 RKVVTGSTG-KPKGVLHTTGGYLL 154 (281)
Q Consensus 132 i~~TSGTTG-~PK~v~~s~~~l~~ 154 (281)
..-|||||| ++|.+..+++.+..
T Consensus 106 F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 106 FLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred hhhcCCCCCCceeeeecCHHHHHH
Confidence 789999996 69999999986655
No 149
>KOG1529|consensus
Probab=36.46 E-value=29 Score=29.63 Aligned_cols=83 Identities=23% Similarity=0.333 Sum_probs=47.5
Q ss_pred cceeeccCCCCCCceeccccccchhhhhcc--CCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCE
Q psy9113 2 QWYYHSIGGGKCSIVDTFWQTETGGHVLTP--LPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDR 79 (281)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~--~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~ 79 (281)
+|+-..+++....|.|..|---.....-.. ....-|....+ +.+.....+-.|.-..-..+.+|.....+|+.++++
T Consensus 10 ~~v~~~~~~~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~f-dld~~~~~s~~~~~~lp~~e~Fa~y~~~lGi~n~d~ 88 (286)
T KOG1529|consen 10 KWVMENLGNHGLRILDASWYFPPLRRIAEFEFLERHIPGASHF-DLDIISYPSSPYRHMLPTAEHFAEYASRLGVDNGDH 88 (286)
T ss_pred HHHHHhCcCCCeEEEeeeeecCchhhhhhhhhhhccCCCceee-eccccccCCCcccccCccHHHHHHHHHhcCCCCCCe
Confidence 455556667778888888865543222222 11222332222 222223333334444444477788888899999999
Q ss_pred EEEEeC
Q psy9113 80 VAIYLP 85 (281)
Q Consensus 80 V~l~~~ 85 (281)
|.++.+
T Consensus 89 vViYd~ 94 (286)
T KOG1529|consen 89 VVIYDR 94 (286)
T ss_pred EEEEcC
Confidence 999977
No 150
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=35.89 E-value=70 Score=28.29 Aligned_cols=45 Identities=22% Similarity=0.141 Sum_probs=32.6
Q ss_pred HHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecC
Q psy9113 63 CKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSK 110 (281)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 110 (281)
..+-..|..+|+++||.|++-.- -+....-|+..+|+.+|.++-+
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~ 95 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDID 95 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BE
T ss_pred HHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEecc
Confidence 44555567789999999988643 5667778899999999988765
No 151
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=33.30 E-value=1.1e+02 Score=26.35 Aligned_cols=56 Identities=18% Similarity=0.274 Sum_probs=44.5
Q ss_pred CeeeeHHHHHHH-----HHHHHHH-HHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEE
Q psy9113 50 YSRLTYKKLLEE-----VCKCANV-LKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHS 105 (281)
Q Consensus 50 ~~~~Ty~~l~~~-----~~~la~~-L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v 105 (281)
-..+.|.++.+. +...... +...|+.+.+.|.++|..+....+..+|+..+|....
T Consensus 201 AiNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 201 AINIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred CcCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 367888888882 2223333 3367999999999999999999999999999998766
No 152
>TIGR00522 dph5 diphthine synthase. This protein participates in the modification of a specific His of elongation factor 2 of eukarotes and Archaea to diphthamide. The protein was characterized in Saccharomyces cerevisiae and designated DPH5.
Probab=32.85 E-value=78 Score=26.68 Aligned_cols=72 Identities=10% Similarity=0.028 Sum_probs=43.4
Q ss_pred CceeccccccchhhhhccCCCCCCCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeC
Q psy9113 14 SIVDTFWQTETGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLP 85 (281)
Q Consensus 14 ~~~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~ 85 (281)
.+...++...+..+.+.++..+..+..++.+.+.+..+..+..+..+....+...|.+.|+.+...|++...
T Consensus 136 ~~~s~~~~~~~~~~~~~~~l~~~~~Tlvll~~~~~~~~~M~~~~~~~~l~~~~~~l~~~g~~~~tpv~vv~~ 207 (257)
T TIGR00522 136 VFFTDNYRPQTPYNVIKENRKIGLHTLVLLDIHPKENRAMTIGEGLENLLEEEEKRKTGAITPDTYAVVIAR 207 (257)
T ss_pred EEecCCcCCCCHHHHHHHHHhcCCCcEEEEecccCcccccCHHHHHHHHHHHHHHHhhcCCCCCCeEEEEEE
Confidence 343444444444444444434333444444433334566788888888888888888777777777777643
No 153
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=31.59 E-value=1.5e+02 Score=21.18 Aligned_cols=40 Identities=20% Similarity=0.190 Sum_probs=28.9
Q ss_pred HHHHHHHHCCCCCCCEEEEEeCC-cHHHHHHHHHHHHhcCe
Q psy9113 64 KCANVLKSKGVQKGDRVAIYLPM-VLEIVVTMLACARIGAV 103 (281)
Q Consensus 64 ~la~~L~~~g~~~g~~V~l~~~n-~~~~~~~~lA~~~~G~~ 103 (281)
.+.+.+.+.|+.+++.|.+++.. +.....+...+...|..
T Consensus 66 ~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 34445566688889999999988 46666666677777864
No 154
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=31.01 E-value=60 Score=26.48 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=24.5
Q ss_pred CCCCCEEEEEeCCcHHHHHHHHHHHHhcC-eEEEeecC
Q psy9113 74 VQKGDRVAIYLPMVLEIVVTMLACARIGA-VHSIVVSK 110 (281)
Q Consensus 74 ~~~g~~V~l~~~n~~~~~~~~lA~~~~G~-~~v~l~~~ 110 (281)
.++||.++|+.+|..+.+-.++..+.... ..+-+...
T Consensus 42 Y~pGD~l~V~P~N~~~~V~~~l~~lgl~~d~~v~~~~~ 79 (219)
T PF00667_consen 42 YQPGDHLGVYPPNDPEEVERLLKRLGLDPDEPVTLKPK 79 (219)
T ss_dssp --TT-EEEEE-SSEHHHHHHHHHHHTSGTTSEEEEEES
T ss_pred ccCCCEEEEEccCCHHHHHHHHHHhCCCcceEEEEEec
Confidence 57999999999999999999988765543 33334333
No 155
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=30.27 E-value=1.5e+02 Score=26.54 Aligned_cols=40 Identities=25% Similarity=0.103 Sum_probs=28.5
Q ss_pred HHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecC
Q psy9113 68 VLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSK 110 (281)
Q Consensus 68 ~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 110 (281)
.+...++++||.|++-.+ .+.....++...|+.++.++.+
T Consensus 62 ~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d 101 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIR 101 (376)
T ss_pred HHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecC
Confidence 344457889999887554 4455566677889999888764
No 156
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=30.26 E-value=56 Score=25.96 Aligned_cols=60 Identities=17% Similarity=0.109 Sum_probs=40.0
Q ss_pred chhhhhccCCCCCCCCCccccCCCCCCeeeeHHHH--HHHHHHHHHHHHHCCCCCCCEEEEEe
Q psy9113 24 TGGHVLTPLPGCTPMKPGAAGNDPDDYSRLTYKKL--LEEVCKCANVLKSKGVQKGDRVAIYL 84 (281)
Q Consensus 24 tl~~~l~~~a~~~pd~~a~~~~~~~~~~~~Ty~~l--~~~~~~la~~L~~~g~~~g~~V~l~~ 84 (281)
...+.+.+..+++|...+.+..+.|...+-.|.+- .+|++.++..|...|+.++ +|.+.+
T Consensus 100 ~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~G 161 (190)
T COG2885 100 ATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTVG 161 (190)
T ss_pred HHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEEE
Confidence 45556666677788776666544444445555533 4688899999999998777 665543
No 157
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=29.60 E-value=1.3e+02 Score=27.00 Aligned_cols=47 Identities=21% Similarity=0.154 Sum_probs=35.6
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCC
Q psy9113 62 VCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKC 111 (281)
Q Consensus 62 ~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 111 (281)
+..+.-.|+.+++++||.|.+ .+.-|++..=+++..|+.+|.++-+-
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~ 105 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDP 105 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCC
Confidence 344445566678999996655 34578899999999999999987653
No 158
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=29.49 E-value=1.7e+02 Score=19.32 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=30.0
Q ss_pred HHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 64 KCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 64 ~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
.+...+...+..+++.|.+++.++.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 3344455567888899999998888777777777888876
No 159
>PF07538 ChW: Clostridial hydrophobic W; InterPro: IPR006637 This hydrophobic repeat is found in a number of Chlostridium proteins. It contains a conserved tryptophan residue.
Probab=29.33 E-value=38 Score=18.93 Aligned_cols=13 Identities=23% Similarity=0.312 Sum_probs=10.0
Q ss_pred eeecCCCCCceEE
Q psy9113 134 VVTGSTGKPKGVL 146 (281)
Q Consensus 134 ~TSGTTG~PK~v~ 146 (281)
-++||+|..|.+.
T Consensus 15 ~~aGt~G~~~rlE 27 (36)
T PF07538_consen 15 QTAGTTGQGLRLE 27 (36)
T ss_pred eecccCCCCcEEE
Confidence 4679999988764
No 160
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=29.18 E-value=1.9e+02 Score=22.47 Aligned_cols=20 Identities=5% Similarity=0.212 Sum_probs=18.6
Q ss_pred eeHHHHHHHHHHHHHHHHHC
Q psy9113 53 LTYKKLLEEVCKCANVLKSK 72 (281)
Q Consensus 53 ~Ty~~l~~~~~~la~~L~~~ 72 (281)
+||.|+.+.+.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999875
No 161
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=28.95 E-value=2.4e+02 Score=22.88 Aligned_cols=56 Identities=9% Similarity=-0.019 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCCCCCCc
Q psy9113 56 KKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKCSGDDM 116 (281)
Q Consensus 56 ~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~ 116 (281)
.+.++.+.++++.|.++| .+.+.....=-+=+..=++...|..++.+.|.+..+.-
T Consensus 30 ~~~~~~a~~lg~~la~~g-----~~V~tGG~~GiMea~~~gA~~~gg~~vGi~p~~~~~~e 85 (205)
T COG1611 30 EEYYELARELGRELAKRG-----LLVITGGGPGVMEAVARGALEAGGLVVGILPGLLHEQE 85 (205)
T ss_pred HHHHHHHHHHHHHHHhCC-----cEEEeCCchhhhhHHHHHHHHcCCeEEEecCCCchhhc
Confidence 348899999999998876 44444444445556677888999999999998766543
No 162
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=28.86 E-value=2.2e+02 Score=20.29 Aligned_cols=54 Identities=15% Similarity=0.119 Sum_probs=33.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEe
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIV 107 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l 107 (281)
-.++|.++.+.++.+|..|.+.+.... . .+..+.+ .+..+..-+...+......
T Consensus 3 i~~~~~~~~~~~~~la~~i~~~~~~~~-~-ivgi~~~-G~~~a~~la~~l~~~~~~~ 56 (125)
T PF00156_consen 3 IILSPEQIEALAERLAEQIKESGFDFD-V-IVGIPRG-GIPLAAALARALGIPLVFV 56 (125)
T ss_dssp EEEBHHHHHHHHHHHHHHHHHHTTTSS-E-EEEETTT-THHHHHHHHHHHTHEEEEE
T ss_pred EEEcHHHHHHHHHHHHHHHHHhCCCCC-E-EEeehhc-cHHHHHHHHHHhCCCccce
Confidence 357999999999999999999865433 3 3333333 2344444444555544433
No 163
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=28.82 E-value=80 Score=28.01 Aligned_cols=77 Identities=13% Similarity=-0.136 Sum_probs=54.9
Q ss_pred eEEEechhHHHHHHHhhhh---hccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeee
Q psy9113 144 GVLHTTGGYLLYAATTHKY---VFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGH 220 (281)
Q Consensus 144 ~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~ 220 (281)
...+|+..+.. .....+. ..++++++++...+|-+-.+ ...+++++..|+..+.+ +. ....+.+...++
T Consensus 19 ~~~~Ty~~l~~-~v~~la~~L~~~g~~~~~~V~i~~~n~~~~--~~~~~A~~~~G~~~v~l--~~---~~~~~~~~~~l~ 90 (417)
T PF00501_consen 19 GRSLTYKQLYE-RVRKLAAALRKLGVKKGDRVAILLPNSIEF--VVAFLACLRAGAIPVPL--DP---SLSEDELRHILR 90 (417)
T ss_dssp TEEEEHHHHHH-HHHHHHHHHHHTTSSTTSEEEEEESSSHHH--HHHHHHHHHTT-EEEEE--ET---TSSHHHHHHHHH
T ss_pred CEEEEHHHHHH-HHHHHhhHHHHhCCCccccccccCCcccee--eeeeccccccccccccc--cc---cccccccccccc
Confidence 35677776666 3332222 46788899888887776433 45789999999999999 42 456788888999
Q ss_pred eeccceec
Q psy9113 221 TYVVYGPL 228 (281)
Q Consensus 221 ~~~vt~~~ 228 (281)
+.+++.++
T Consensus 91 ~~~~~~ii 98 (417)
T PF00501_consen 91 QSGPKVII 98 (417)
T ss_dssp HHTESEEE
T ss_pred ccceeEEE
Confidence 99999976
No 164
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=28.38 E-value=1.8e+02 Score=23.24 Aligned_cols=51 Identities=14% Similarity=0.042 Sum_probs=30.9
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcC
Q psy9113 50 YSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGA 102 (281)
Q Consensus 50 ~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~ 102 (281)
...+|+.|+.+++.++|..+.+. .+....+.+...++--..+..++ -..+.
T Consensus 9 ~~lis~~~I~~~i~~lA~~I~~~-~~~~~~vivgi~~Gg~~fa~~L~-~~L~~ 59 (189)
T PLN02238 9 KVLWTAEDISARVAELAAQIASD-YAGKSPVVLGVATGAFMFLADLV-RAIQP 59 (189)
T ss_pred EEEcCHHHHHHHHHHHHHHHHHH-cCCCCcEEEEEccCCHHHHHHHH-HHhCc
Confidence 35799999999999999999875 32122334444444333334443 33343
No 165
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=28.29 E-value=1.3e+02 Score=29.02 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=35.5
Q ss_pred HHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCe
Q psy9113 63 CKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAV 103 (281)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~ 103 (281)
..+...+.+.|+.+++.|.++|..+.....+++++..+|..
T Consensus 209 ~el~~~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~ 249 (610)
T PRK09629 209 QDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYP 249 (610)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCCC
Confidence 45677778889999999999999998888888999999985
No 166
>PLN03052 acetate--CoA ligase; Provisional
Probab=27.86 E-value=2e+02 Score=28.32 Aligned_cols=92 Identities=7% Similarity=-0.092 Sum_probs=62.3
Q ss_pred cccceeeeecCC-CCCceEEEechhHHHHHHHhhh---hhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecC
Q psy9113 128 KLKLRKVVTGST-GKPKGVLHTTGGYLLYAATTHK---YVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSL 203 (281)
Q Consensus 128 ~~~~i~~TSGTT-G~PK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~ 203 (281)
+.+++++..... |.+ ...+|...+.. .....+ ...++.++|++...+|-.--+ +..+++++..|+..+.+
T Consensus 190 d~~Ai~~~~e~~~~~~-~~~~Ty~eL~~-~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi-- 263 (728)
T PLN03052 190 DSIAIIWRDEGSDDLP-VNRMTLSELRS-QVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSI-- 263 (728)
T ss_pred CCeEEEEECCCCCCCc-eEEeeHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEee--
Confidence 344466654322 222 34578887766 333322 346889999999999976544 45789999999998888
Q ss_pred CCccccccccccceeeeeeccceec
Q psy9113 204 PGEIYWCTADVGWITGHTYVVYGPL 228 (281)
Q Consensus 204 ~~~~~~~~~~~~~~~i~~~~vt~~~ 228 (281)
+. .+.++.+...++..++..++
T Consensus 264 ~p---~~~~~~l~~rl~~~~~k~li 285 (728)
T PLN03052 264 AD---SFAPSEIATRLKISKAKAIF 285 (728)
T ss_pred CC---CCCHHHHHHHHHhcCceEEE
Confidence 42 56778888888877777765
No 167
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=27.79 E-value=2.1e+02 Score=23.37 Aligned_cols=44 Identities=25% Similarity=0.348 Sum_probs=32.8
Q ss_pred HHCCCCCCCEEEEEeCCcH--HHHHHHHHHHHhcCeEEEeecCCCCCC
Q psy9113 70 KSKGVQKGDRVAIYLPMVL--EIVVTMLACARIGAVHSIVVSKCSGDD 115 (281)
Q Consensus 70 ~~~g~~~g~~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~ 115 (281)
...|+.++|++. ..|=.. .....+++++..|+..+.. +.+++++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~ 216 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPAR 216 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHH
Confidence 456889999999 877643 4445789999999999887 4555543
No 168
>KOG2631|consensus
Probab=27.54 E-value=33 Score=27.83 Aligned_cols=72 Identities=10% Similarity=-0.016 Sum_probs=48.5
Q ss_pred eeccCCCCCCceeccccccchhhhhccCCCCCCCCCccccCCCC------CC-eeeeHHHHHHHHHHHHHHHHHCCCCC
Q psy9113 5 YHSIGGGKCSIVDTFWQTETGGHVLTPLPGCTPMKPGAAGNDPD------DY-SRLTYKKLLEEVCKCANVLKSKGVQK 76 (281)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~a~~~~~~~------~~-~~~Ty~~l~~~~~~la~~L~~~g~~~ 76 (281)
+++.+.=+++|++..-...-+.|-+.+..+.+|+..|+.-.+.+ ++ +.-|..|-++.--.+|-.++++|+.+
T Consensus 149 ~~y~D~L~vPIIeNt~~E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~klgipp 227 (238)
T KOG2631|consen 149 LPYFDTLVVPIIENTPSESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIPP 227 (238)
T ss_pred ccccceEEEeeecCCchHHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 34556667889999988888999999999999999998643211 11 12233444444445566667777754
No 169
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=27.22 E-value=2.3e+02 Score=20.04 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=34.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEE
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSI 106 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~ 106 (281)
..+.+.++.+ .+.+.+..+++.|.++|.++.....+...+...|..-+-
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~ 89 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAE 89 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEE
Confidence 4566766543 344445556678999999987777777777888876553
No 170
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=26.76 E-value=1.5e+02 Score=25.78 Aligned_cols=49 Identities=12% Similarity=0.047 Sum_probs=35.4
Q ss_pred HHHHHHHHHCCCCCCCEEEEEeCCcHHH-HHHHHHHHHhcCe-EEEeecCC
Q psy9113 63 CKCANVLKSKGVQKGDRVAIYLPMVLEI-VVTMLACARIGAV-HSIVVSKC 111 (281)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~l~~~n~~~~-~~~~lA~~~~G~~-~v~l~~~~ 111 (281)
..++..|.+.|+.++++|.+++.++..+ .-+.+.+...|.- +..++..+
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~ 139 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGL 139 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCH
Confidence 5677788999999999999998776443 3445677778874 44555543
No 171
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=26.59 E-value=1.5e+02 Score=28.66 Aligned_cols=78 Identities=8% Similarity=-0.167 Sum_probs=59.2
Q ss_pred eEEEechhHHHHHHHhhhh---hccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeee
Q psy9113 144 GVLHTTGGYLLYAATTHKY---VFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGH 220 (281)
Q Consensus 144 ~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~ 220 (281)
...+|.+.+.. ....++. ..++.++|++...+|-.--. ...+++++..|+..+.+ .. .+.++.+...++
T Consensus 90 ~~~~Ty~eL~~-~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl--~~---~~~~~~l~~~l~ 161 (647)
T PTZ00237 90 TIKLTYYQLYE-KVCEFSRVLLNLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVL--FD---GYSVKSLIDRIE 161 (647)
T ss_pred eEEEEHHHHHH-HHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEee--CC---CCCHHHHHHHHH
Confidence 35688888776 4433333 36899999999999987654 35789999999998888 42 577888888898
Q ss_pred eeccceecc
Q psy9113 221 TYVVYGPLA 229 (281)
Q Consensus 221 ~~~vt~~~~ 229 (281)
..++..++.
T Consensus 162 ~~~~~~li~ 170 (647)
T PTZ00237 162 TITPKLIIT 170 (647)
T ss_pred hcCCCEEEE
Confidence 888888763
No 172
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=26.41 E-value=92 Score=16.29 Aligned_cols=19 Identities=21% Similarity=0.405 Sum_probs=14.6
Q ss_pred CCCCCeeeeHHHHHHHHHH
Q psy9113 46 DPDDYSRLTYKKLLEEVCK 64 (281)
Q Consensus 46 ~~~~~~~~Ty~~l~~~~~~ 64 (281)
|.+....+++.||.+...+
T Consensus 10 D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 10 DKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp STTSSSEEEHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHh
Confidence 3466789999999887654
No 173
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=26.33 E-value=2.7e+02 Score=20.63 Aligned_cols=52 Identities=13% Similarity=0.047 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCEEEEEeCC--cHHHHHHHHHHHHhcCeEEEee
Q psy9113 57 KLLEEVCKCANVLKS-KGVQKGDRVAIYLPM--VLEIVVTMLACARIGAVHSIVV 108 (281)
Q Consensus 57 ~l~~~~~~la~~L~~-~g~~~g~~V~l~~~n--~~~~~~~~lA~~~~G~~~v~l~ 108 (281)
.-.+.-..++..+.+ ..+++||.+.+++.+ ++..+-+...+...|+.++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 83 NDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp HHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred cccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 333334455555544 357899999998855 5788888889999999888763
No 174
>PRK10595 SOS cell division inhibitor; Provisional
Probab=26.19 E-value=2.4e+02 Score=22.05 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=31.4
Q ss_pred HHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEe
Q psy9113 66 ANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIV 107 (281)
Q Consensus 66 a~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l 107 (281)
+.+|.+.|+..+..+.|.-.+..+.+.++-=|++.|..-+.+
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL 111 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVL 111 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEE
Confidence 456777888877666676777788888888888888755544
No 175
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=25.02 E-value=4.1e+02 Score=22.20 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=27.4
Q ss_pred HHHHHHHHCC-CCCCCEEEEEeCCcHHHHHHHHHHHH
Q psy9113 64 KCANVLKSKG-VQKGDRVAIYLPMVLEIVVTMLACAR 99 (281)
Q Consensus 64 ~la~~L~~~g-~~~g~~V~l~~~n~~~~~~~~lA~~~ 99 (281)
++.+.+.+.+ +.+|++|+|...-+.|+++++..+..
T Consensus 15 ~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~ 51 (258)
T PRK10696 15 QVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLN 51 (258)
T ss_pred HHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHH
Confidence 4445566654 57899999999999999987766644
No 176
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.52 E-value=1.1e+02 Score=23.06 Aligned_cols=72 Identities=4% Similarity=-0.157 Sum_probs=45.1
Q ss_pred CEEEEeCch-hhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeeeccceeccCCchhH---HHHHHHHhhc
Q psy9113 170 DIYWCTADV-GWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTYVVYGPLANGATSV---IVSETLKMLN 245 (281)
Q Consensus 170 ~~~l~~~pl-~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~~~~~~---~~~~ll~~~~ 245 (281)
.+++...+- .|..|....-..--..|-.++.. . ....++++.+.+.+++++.+.++..... ....+++.+.
T Consensus 5 ~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~L--G---~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~ 79 (137)
T PRK02261 5 TVVLGVIGADCHAVGNKILDRALTEAGFEVINL--G---VMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCI 79 (137)
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHCCCEEEEC--C---CCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHH
Confidence 344444444 57777754444444567777777 4 2577899999999999999775543333 2345555554
Q ss_pred c
Q psy9113 246 T 246 (281)
Q Consensus 246 ~ 246 (281)
.
T Consensus 80 ~ 80 (137)
T PRK02261 80 E 80 (137)
T ss_pred h
Confidence 3
No 177
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=24.31 E-value=2.8e+02 Score=20.12 Aligned_cols=39 Identities=8% Similarity=0.094 Sum_probs=27.7
Q ss_pred CCCCCCCEEEEEeC-CcHHHHHHHHHHHHhcCeEEEeecC
Q psy9113 72 KGVQKGDRVAIYLP-MVLEIVVTMLACARIGAVHSIVVSK 110 (281)
Q Consensus 72 ~g~~~g~~V~l~~~-n~~~~~~~~lA~~~~G~~~v~l~~~ 110 (281)
.|+.+++.|.++|. .+.....+.+.+...|.-+..++..
T Consensus 81 ~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~~v~~L~GG 120 (128)
T cd01520 81 ARLERDPKLLIYCARGGMRSQSLAWLLESLGIDVPLLEGG 120 (128)
T ss_pred hccCCCCeEEEEeCCCCccHHHHHHHHHHcCCceeEeCCc
Confidence 58888999999996 4556666666667788865555443
No 178
>KOG1529|consensus
Probab=24.22 E-value=1.8e+02 Score=24.89 Aligned_cols=58 Identities=14% Similarity=0.231 Sum_probs=44.3
Q ss_pred eeeeHHHHHHH------HHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeec
Q psy9113 51 SRLTYKKLLEE------VCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVS 109 (281)
Q Consensus 51 ~~~Ty~~l~~~------~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~ 109 (281)
..+-+.+++.. ...+-..+.+.|+..++.|.+-|..++.-.+..+|+.+.| +.+.+..
T Consensus 204 ~n~P~~~~~~~~g~~k~~edl~~~f~~~~l~~~~p~~~sC~~Gisa~~i~~al~r~g-~~~~lYd 267 (286)
T KOG1529|consen 204 INFPFDEVLDPDGFIKPAEDLKHLFAQKGLKLSKPVIVSCGTGISASIIALALERSG-PDAKLYD 267 (286)
T ss_pred ccCChHHhcccccccCCHHHHHHHHHhcCcccCCCEEEeeccchhHHHHHHHHHhcC-CCcceec
Confidence 34455555443 4555567778899999999999999999999999999999 6665543
No 179
>PLN02654 acetate-CoA ligase
Probab=24.12 E-value=1.6e+02 Score=28.54 Aligned_cols=77 Identities=12% Similarity=-0.150 Sum_probs=57.7
Q ss_pred eEEEechhHHHHHHHhhh---hhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeee
Q psy9113 144 GVLHTTGGYLLYAATTHK---YVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGH 220 (281)
Q Consensus 144 ~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~ 220 (281)
...+|...|.. .....+ ...+++++|++...+|-.--. +..+++++..|+..+.+ +. .+.++.+...++
T Consensus 118 ~~~~Ty~eL~~-~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~--v~a~lA~~~~Gav~vpv--~~---~~~~~~l~~~l~ 189 (666)
T PLN02654 118 DASLTYSELLD-RVCQLANYLKDVGVKKGDAVVIYLPMLMEL--PIAMLACARIGAVHSVV--FA---GFSAESLAQRIV 189 (666)
T ss_pred eEEEeHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEec--CC---CCCHHHHHHHHH
Confidence 35688888776 433333 346889999999999886544 46789999999998888 42 577888888888
Q ss_pred eeccceec
Q psy9113 221 TYVVYGPL 228 (281)
Q Consensus 221 ~~~vt~~~ 228 (281)
..++..++
T Consensus 190 ~~~~~~li 197 (666)
T PLN02654 190 DCKPKVVI 197 (666)
T ss_pred hcCceEEE
Confidence 88888866
No 180
>smart00728 ChW Clostridial hydrophobic, with a conserved W residue, domain.
Probab=24.04 E-value=50 Score=19.72 Aligned_cols=12 Identities=17% Similarity=0.432 Sum_probs=9.5
Q ss_pred eecCCCCCceEE
Q psy9113 135 VTGSTGKPKGVL 146 (281)
Q Consensus 135 TSGTTG~PK~v~ 146 (281)
++||+|..+.+.
T Consensus 17 ~aGT~G~~lriE 28 (46)
T smart00728 17 IAGTVGQGLRIE 28 (46)
T ss_pred EcccCCCCceeE
Confidence 689999987663
No 181
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=23.77 E-value=2.5e+02 Score=23.83 Aligned_cols=49 Identities=16% Similarity=0.128 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEeCCcHH-HHHHHHHHHHhcCe-EEEeec
Q psy9113 61 EVCKCANVLKSKGVQKGDRVAIYLPMVLE-IVVTMLACARIGAV-HSIVVS 109 (281)
Q Consensus 61 ~~~~la~~L~~~g~~~g~~V~l~~~n~~~-~~~~~lA~~~~G~~-~v~l~~ 109 (281)
....+...+.+.|+.++++|.+++.++.. ...+.+.+...|.. +..++.
T Consensus 71 ~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~G 121 (281)
T PRK11493 71 RPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAG 121 (281)
T ss_pred CHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCC
Confidence 35677888899999999999999987643 33445667788866 334443
No 182
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=23.60 E-value=1.2e+02 Score=19.90 Aligned_cols=27 Identities=22% Similarity=0.073 Sum_probs=23.1
Q ss_pred CCeeeeHHHHHHHHHHHHHHHHHCCCC
Q psy9113 49 DYSRLTYKKLLEEVCKCANVLKSKGVQ 75 (281)
Q Consensus 49 ~~~~~Ty~~l~~~~~~la~~L~~~g~~ 75 (281)
.++.+|.+++.+.++++.+.+++.|.-
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~~GY~ 53 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYREKGYI 53 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHHTT-T
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHcCce
Confidence 578999999999999999999999864
No 183
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=22.97 E-value=2.4e+02 Score=23.06 Aligned_cols=38 Identities=16% Similarity=-0.055 Sum_probs=27.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcH
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVL 88 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~ 88 (281)
.--|+.++.+|+...-..+......+|++|++++..+.
T Consensus 148 ~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~v 185 (228)
T PRK14119 148 YSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNS 185 (228)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHH
Confidence 34689999999988766654444446778888887553
No 184
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=22.87 E-value=2.3e+02 Score=21.75 Aligned_cols=46 Identities=15% Similarity=0.043 Sum_probs=29.3
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHH
Q psy9113 50 YSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACA 98 (281)
Q Consensus 50 ~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~ 98 (281)
...+||.|+.+.++++|..+.+.| + -+.|.-....+ -.....++-.
T Consensus 7 ~~~is~~~i~~~i~~la~~I~~~~-~-~d~vvgv~~GG-~~fa~~L~~~ 52 (156)
T PRK09177 7 KFPVSWDQLHRDARALAWRLLPAG-Q-WKGIIAVTRGG-LVPAAILARE 52 (156)
T ss_pred cEEcCHHHHHHHHHHHHHHHHhhC-C-CCEEEEEecCC-eehHHHHHHH
Confidence 356899999999999999998764 2 24444444333 3333444333
No 185
>PLN03102 acyl-activating enzyme; Provisional
Probab=22.46 E-value=1.4e+02 Score=28.18 Aligned_cols=75 Identities=8% Similarity=-0.221 Sum_probs=55.2
Q ss_pred EEechhHHHHHHHhhhh---hccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeeee
Q psy9113 146 LHTTGGYLLYAATTHKY---VFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHTY 222 (281)
Q Consensus 146 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~ 222 (281)
.+|...+.. ....... ..++.++|++...+|-.-. ....+++++..|+.++.. +. ...++.+...+++.
T Consensus 39 ~~Ty~eL~~-~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e--~~~~~la~~~~G~~~vpl--~~---~~~~~~l~~~l~~~ 110 (579)
T PLN03102 39 RFTWPQTYD-RCCRLAASLISLNITKNDVVSVLAPNTPA--MYEMHFAVPMAGAVLNPI--NT---RLDATSIAAILRHA 110 (579)
T ss_pred EEEHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeec--cc---cCCHHHHHHHHhcc
Confidence 477777766 4433333 3578899999888886543 345788999999988887 42 56788888999999
Q ss_pred ccceec
Q psy9113 223 VVYGPL 228 (281)
Q Consensus 223 ~vt~~~ 228 (281)
+++.++
T Consensus 111 ~~~~ii 116 (579)
T PLN03102 111 KPKILF 116 (579)
T ss_pred CCeEEE
Confidence 998876
No 186
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=22.22 E-value=2.1e+02 Score=28.20 Aligned_cols=35 Identities=6% Similarity=-0.105 Sum_probs=28.3
Q ss_pred CCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEEeecCC
Q psy9113 74 VQKGDRVAIYLPMVLEIVVTMLACARIGAVHSIVVSKC 111 (281)
Q Consensus 74 ~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 111 (281)
+.+||.|+ +-+|+--.+.- |+..+|+.+|-+.|..
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~~--aLilsga~PVYl~P~~ 266 (713)
T PRK15399 232 APAGSTLL-IDRNCHKSLAH--LLMMSDVVPIWLKPTR 266 (713)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeeEEecccc
Confidence 56888765 67777777544 9999999999999887
No 187
>smart00467 GS GS motif. Aa approx. 30 amino acid motif that precedes the kinase domain in types I and II TGF beta receptors. Mutation of two or more of the serines or threonines in the TTSGSGSG of TGF-beta type I receptor impairs phosphorylation and signaling activity.
Probab=21.79 E-value=12 Score=20.16 Aligned_cols=13 Identities=38% Similarity=0.509 Sum_probs=9.0
Q ss_pred eecC-CCCCceEEE
Q psy9113 135 VTGS-TGKPKGVLH 147 (281)
Q Consensus 135 TSGT-TG~PK~v~~ 147 (281)
|||| +|.|-.|..
T Consensus 11 tSGSGSG~p~LvqR 24 (30)
T smart00467 11 TSGSGSGLPLLVQR 24 (30)
T ss_pred cCCCCCCchhHHHH
Confidence 8888 688765543
No 188
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=21.78 E-value=3e+02 Score=21.45 Aligned_cols=45 Identities=16% Similarity=0.124 Sum_probs=28.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHHC--CCCCCCEEEEEeCCcHHHHHHHHHH
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSK--GVQKGDRVAIYLPMVLEIVVTMLAC 97 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~--g~~~g~~V~l~~~n~~~~~~~~lA~ 97 (281)
.-+|+.|+.+++.++|..+.+. |.+ ..+.+...++--.....++-
T Consensus 5 ~l~s~~~i~~~i~~la~~i~~~~~~~~--~~viv~il~gG~~~a~~La~ 51 (176)
T PRK05205 5 EILDAEALRRALTRIAHEIIERNKGLD--NLVLVGIKTRGVWLAERLAE 51 (176)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHcCCCC--CeEEEEEccCCHHHHHHHHH
Confidence 4589999999999999999874 322 23444444443333344443
No 189
>PF08845 SymE_toxin: Toxin SymE, type I toxin-antitoxin system; InterPro: IPR014944 This entry represents a SOS-induced gene whose product shows homology to the antitoxin MazE (SymE), the coding region contains a cis-encoded antisense RNA. The small antisense RNA and the gene have the all the hallmarks of a toxin-antitoxin module. The synthesis of the SymE is tightly repressed at multiple levels; at the transcriptional level by the LexA repressor, at the level of mRNA stability and translation by the SymR RNA and at the level of protein stability by the Lon protease. SymE co-purifies with ribosomes and overproduction of the protein leads to cell growth inhibition, decreased protein synthesis and increased RNA degradation. These properties are shared with several RNA endonuclease toxins of toxin-antitoxin modules. It seems probable that the SymE protein represents an evolutionary derivative of a toxin containing the AbrB fold, whose representatives are typically antitoxins. The SymE promoted cleavage of RNA cleavage may be important for the recycling of RNAs damaged under SOS-inducing conditions []. ; GO: 0003723 RNA binding, 0016788 hydrolase activity, acting on ester bonds, 0016070 RNA metabolic process, 0005737 cytoplasm
Probab=21.74 E-value=1.2e+02 Score=19.09 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=17.1
Q ss_pred HHHHHHCCCCCCCEEEEEeCC
Q psy9113 66 ANVLKSKGVQKGDRVAIYLPM 86 (281)
Q Consensus 66 a~~L~~~g~~~g~~V~l~~~n 86 (281)
..+|.+.|+..|+.|-+-..+
T Consensus 30 G~WL~~aGF~~G~~v~V~v~~ 50 (57)
T PF08845_consen 30 GKWLEEAGFTIGDPVKVRVMP 50 (57)
T ss_pred hhhhHHhCCCCCCEEEEEEEC
Confidence 468889999999999886654
No 190
>PLN02736 long-chain acyl-CoA synthetase
Probab=21.55 E-value=2.7e+02 Score=26.76 Aligned_cols=76 Identities=14% Similarity=-0.225 Sum_probs=55.9
Q ss_pred EEEechhHHHHHHHhhh---hhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCCCccccccccccceeeee
Q psy9113 145 VLHTTGGYLLYAATTHK---YVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLPGEIYWCTADVGWITGHT 221 (281)
Q Consensus 145 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~i~~ 221 (281)
..+|.+.+.. .....+ ...++.++|++...+|-.--+ ...+++++..|+.++.+ +. ...++.+...+++
T Consensus 77 ~~lTy~el~~-~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl--~~---~~~~~~l~~il~~ 148 (651)
T PLN02736 77 KWMTYGEAGT-ARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVPL--YD---TLGPDAVKFIVNH 148 (651)
T ss_pred EEEEHHHHHH-HHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEe--ec---CCCHHHHHHHHhc
Confidence 3467777666 433332 246889999998888776544 34678999999999887 42 5678888899999
Q ss_pred eccceec
Q psy9113 222 YVVYGPL 228 (281)
Q Consensus 222 ~~vt~~~ 228 (281)
.++..++
T Consensus 149 ~~~~~l~ 155 (651)
T PLN02736 149 AEVAAIF 155 (651)
T ss_pred cCCCEEE
Confidence 9999977
No 191
>PF01761 DHQ_synthase: 3-dehydroquinate synthase; PDB: 3OKF_A 1NVA_B 1NUA_A 1NVE_D 1NVB_B 1SG6_A 1NR5_A 1NRX_B 1NVD_A 1NVF_C ....
Probab=21.34 E-value=2.8e+02 Score=23.48 Aligned_cols=50 Identities=16% Similarity=0.114 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeE-EEeecC
Q psy9113 61 EVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVH-SIVVSK 110 (281)
Q Consensus 61 ~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~-v~l~~~ 110 (281)
.+.++-..|.+.|+.+++.|..++.-..--++-+.|..+...+. +-++.+
T Consensus 14 ~~~~i~~~l~~~~~~R~~~iiaiGGGvv~Dl~GFaAs~y~RGi~~i~vPTT 64 (260)
T PF01761_consen 14 TVEKIYDALLEAGLDRDDLIIAIGGGVVGDLAGFAASTYMRGIPFIQVPTT 64 (260)
T ss_dssp HHHHHHHHHHHTT--TTEEEEEEESHHHHHHHHHHHHHBTT--EEEEEE-S
T ss_pred HHHHHHHHHHHcCCCCCCeEEEECChHHHHHHHHHHHHHccCCceEecccc
Confidence 45566677888899999999999998888888888888776555 444443
No 192
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=21.26 E-value=4.5e+02 Score=24.49 Aligned_cols=67 Identities=6% Similarity=-0.105 Sum_probs=46.3
Q ss_pred CCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhc--CeEEEeec
Q psy9113 39 KPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIG--AVHSIVVS 109 (281)
Q Consensus 39 ~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G--~~~v~l~~ 109 (281)
..|+.. ......+|+++.+-++.++..+.+. .+++..+.++.++...=+.-..--...+ ...+.++.
T Consensus 375 ~~alal---~g~~~~~y~~iq~la~~i~~~~~~~-~~~~~Pliiv~e~D~aK~LGq~l~~~l~~~~~iicID~ 443 (475)
T PRK10719 375 AYALAL---PGSLPPSYAAIQTLAKALVDGVARF-PNKPHPLIVVAEQDMGKALGQLLRPQLPKQLPLICIDE 443 (475)
T ss_pred cEEEEc---CCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEEcccHHHHHHHHHHHhcCCCCCEEEEeE
Confidence 344544 3568899999999999999999875 4557788888888765554444333333 55666654
No 193
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=21.05 E-value=3e+02 Score=19.25 Aligned_cols=50 Identities=16% Similarity=0.146 Sum_probs=35.3
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHHHHhcCeEEE
Q psy9113 50 YSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLACARIGAVHSI 106 (281)
Q Consensus 50 ~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~~~~G~~~v~ 106 (281)
...+.+.++.+. +.+.+..+++.|.++|.++.....+...+...|..-+-
T Consensus 38 Ainip~~~l~~~-------l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~G~~~v~ 87 (101)
T TIGR02981 38 AINIPLKEIKEH-------IATAVPDKNDTVKLYCNAGRQSGMAKDILLDMGYTHAE 87 (101)
T ss_pred CEECCHHHHHHH-------HHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHcCCCeEE
Confidence 356777776543 22333445678999999998888888888889986553
No 194
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=20.93 E-value=3e+02 Score=24.95 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=24.3
Q ss_pred CCCCCEEEEEeCCcHHHHHHHH-HHHHhcCeEEEeecC
Q psy9113 74 VQKGDRVAIYLPMVLEIVVTML-ACARIGAVHSIVVSK 110 (281)
Q Consensus 74 ~~~g~~V~l~~~n~~~~~~~~l-A~~~~G~~~v~l~~~ 110 (281)
+++||.|.+.--++...++... .+-+.|+.+..++..
T Consensus 108 ~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~ 145 (405)
T COG0520 108 LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD 145 (405)
T ss_pred hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC
Confidence 6788888887777655444444 444568877766655
No 195
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=20.61 E-value=2.3e+02 Score=27.01 Aligned_cols=91 Identities=10% Similarity=-0.123 Sum_probs=60.5
Q ss_pred cccceeeeecCCCCCceEEEechhHHHHHHHhhh---hhccCCCCCEEEEeCchhhhhhHhHHHHhhhccCceEEEecCC
Q psy9113 128 KLKLRKVVTGSTGKPKGVLHTTGGYLLYAATTHK---YVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIVSLP 204 (281)
Q Consensus 128 ~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~gl~~~~~~~l~~G~~~v~~~~~ 204 (281)
+.+++++.+..+|. .-.+|...+.. .....+ ...++.++|++...+|-.--. ...+++++..|+..+.+ +
T Consensus 68 ~~~A~~~~~~~~~~--~~~~Ty~eL~~-~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~--~ 140 (629)
T PRK10524 68 EQLALIAVSTETDE--ERTYTFRQLHD-EVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVV--F 140 (629)
T ss_pred CCeEEEEEcCCCCc--eEEEeHHHHHH-HHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEee--C
Confidence 33445554332332 34578887766 333222 235889999999999886544 35789999999988877 3
Q ss_pred Cccccccccccceeeeeeccceec
Q psy9113 205 GEIYWCTADVGWITGHTYVVYGPL 228 (281)
Q Consensus 205 ~~~~~~~~~~~~~~i~~~~vt~~~ 228 (281)
. .+.++.+...++..++..++
T Consensus 141 ~---~~~~~~l~~~l~~~~~~~li 161 (629)
T PRK10524 141 G---GFASHSLAARIDDAKPVLIV 161 (629)
T ss_pred C---CCCHHHHHHHHHhcCCcEEE
Confidence 2 46677777778888887765
No 196
>COG2967 ApaG Uncharacterized protein affecting Mg2+/Co2+ transport [Inorganic ion transport and metabolism]
Probab=20.33 E-value=77 Score=23.25 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=21.2
Q ss_pred eeeeecCC-CCCceEEEechhHHH
Q psy9113 132 RKVVTGST-GKPKGVLHTTGGYLL 154 (281)
Q Consensus 132 i~~TSGTT-G~PK~v~~s~~~l~~ 154 (281)
..||||.+ ..|-|+|..|..+..
T Consensus 81 y~YtSg~~l~Tp~G~M~GhY~M~~ 104 (126)
T COG2967 81 YQYTSGCPLDTPSGTMQGHYEMID 104 (126)
T ss_pred eEEcCCcCccCCcceEEEEEEEec
Confidence 78999998 999999999998877
No 197
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=20.30 E-value=3.1e+02 Score=21.67 Aligned_cols=46 Identities=11% Similarity=0.082 Sum_probs=29.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHHCCCCCC-CEEEEEeCCcHHHHHHHHH
Q psy9113 51 SRLTYKKLLEEVCKCANVLKSKGVQKG-DRVAIYLPMVLEIVVTMLA 96 (281)
Q Consensus 51 ~~~Ty~~l~~~~~~la~~L~~~g~~~g-~~V~l~~~n~~~~~~~~lA 96 (281)
--+|..|+.+++.++|..+.+.--..+ +.+.+...++--..+..++
T Consensus 7 ~l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~ 53 (178)
T PRK15423 7 VMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLC 53 (178)
T ss_pred EecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHH
Confidence 358999999999999999987421112 3455555554444444443
No 198
>COG2746 Aminoglycoside N3'-acetyltransferase [Defense mechanisms]
Probab=20.15 E-value=1.2e+02 Score=25.40 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=20.6
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEeCCc
Q psy9113 62 VCKCANVLKSKGVQKGDRVAIYLPMV 87 (281)
Q Consensus 62 ~~~la~~L~~~g~~~g~~V~l~~~n~ 87 (281)
.+.+...|.++|+++|++|.+.+.++
T Consensus 14 ~~~l~~~l~~lG~k~G~~v~vHssl~ 39 (251)
T COG2746 14 SQDLKDDLYKLGLKEGDTVIVHSSLS 39 (251)
T ss_pred HHHHHHHHHHhcCCCCCEEEEehhhh
Confidence 34566677788999999999988764
No 199
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=20.06 E-value=5.8e+02 Score=23.77 Aligned_cols=83 Identities=7% Similarity=-0.050 Sum_probs=53.4
Q ss_pred cchhhhhccCCCCC-----CCCCccccCCCCCCeeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEeCCcHHHHHHHHHH
Q psy9113 23 ETGGHVLTPLPGCT-----PMKPGAAGNDPDDYSRLTYKKLLEEVCKCANVLKSKGVQKGDRVAIYLPMVLEIVVTMLAC 97 (281)
Q Consensus 23 ~tl~~~l~~~a~~~-----pd~~a~~~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~l~~~n~~~~~~~~lA~ 97 (281)
..+.+.+.+..+.+ -+..|+.. ......+|+++.+-++.++..+.+. +.++..+.++..+...=+.-..--
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal---~g~~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKvLGq~l~ 428 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALAL---PGKPNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKVLGQTLQ 428 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEe---CCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHHHHHHHH
Confidence 34555555544332 23344444 3456899999999999999999876 567778888888876555444333
Q ss_pred HHh--cCeEEEeec
Q psy9113 98 ARI--GAVHSIVVS 109 (281)
Q Consensus 98 ~~~--G~~~v~l~~ 109 (281)
... +...+.++.
T Consensus 429 ~~l~~~~~licID~ 442 (473)
T PF06277_consen 429 ALLPKKRPLICIDQ 442 (473)
T ss_pred HhcCCCCCEEEEee
Confidence 332 466666654
Done!