BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9115
(96 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307167406|gb|EFN60991.1| Ribosome-recycling factor, mitochondrial [Camponotus floridanus]
Length = 212
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDV 72
VTKEHRESLSKNAK+ + KC NIRDI+NK KTVKNK EGL++D +
Sbjct: 133 VTKEHRESLSKNAKSFYTKCCSNIRDIRNKQIKTVKNK---EGLAKDII 178
>gi|332375891|gb|AEE63086.1| unknown [Dendroctonus ponderosae]
Length = 268
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE L+KNAK LFVKCK+++RD+Q K+ K +K +++ +S+D RSV +Q
Sbjct: 190 VTKEHREQLAKNAKQLFVKCKDSVRDVQLKFIKQLKKQDR---ISEDLARSVEQQ 241
>gi|357629685|gb|EHJ78304.1| mitochondrial ribosome recycling factor [Danaus plexippus]
Length = 185
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+L++NAK LF+KC+++I+DIQN+Y K K K +S+D V SV++Q
Sbjct: 108 VTKEHREALARNAKILFIKCRDSIKDIQNEYIKKTK---KQTDVSEDLVFSVNKQ 159
>gi|91077948|ref|XP_966879.1| PREDICTED: similar to mitochondrial ribosome recycling factor
[Tribolium castaneum]
gi|270002287|gb|EEZ98734.1| hypothetical protein TcasGA2_TC001287 [Tribolium castaneum]
Length = 262
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQSAFES 83
VT EHRE+L+K+AK +F+KC++ IRD+QNK K++K K+K +S+D R+ SEQ
Sbjct: 184 VTTEHRENLAKSAKTMFIKCRDGIRDVQNKQVKSLKKKDK---VSEDMARN-SEQQIVAI 239
Query: 84 YHGFIS 89
+I+
Sbjct: 240 ADAYIA 245
>gi|241614866|ref|XP_002406692.1| ribosome recycling factor, putative [Ixodes scapularis]
gi|215500850|gb|EEC10344.1| ribosome recycling factor, putative [Ixodes scapularis]
Length = 263
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 21 SFVVTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTV-KNKEKSEGLSQDDVRSVSEQS 79
+F VT+EHRE+LSKNAKALFVK KE++ I+ KY K + KNK G+S+D V + S Q
Sbjct: 181 TFRVTREHRETLSKNAKALFVKAKEDLVAIERKYLKEIQKNK---LGISEDVVYNASLQV 237
Query: 80 AFES 83
E+
Sbjct: 238 KMEA 241
>gi|322796292|gb|EFZ18864.1| hypothetical protein SINV_09513 [Solenopsis invicta]
Length = 308
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 9/68 (13%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQSAFES 83
VTKEHRE+LSKNAK+ +VKC +N+R I+NK K +K KEK L++D V + ES
Sbjct: 229 VTKEHRETLSKNAKSFYVKCCDNVRQIRNKQIKAIKQKEK---LAKDLVFRI------ES 279
Query: 84 YHGFISGE 91
Y +S +
Sbjct: 280 YIDILSHQ 287
>gi|157121137|ref|XP_001659843.1| mitochondrial ribosome recycling factor [Aedes aegypti]
gi|108874707|gb|EAT38932.1| AAEL009225-PA [Aedes aegypti]
Length = 258
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 3/47 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQD 70
VT+EHRE L+KNAK LFVKC++ I+DIQNK K VK K +S+D
Sbjct: 180 VTREHREGLAKNAKTLFVKCRDAIKDIQNKTIKQVK---KQANISED 223
>gi|328718680|ref|XP_001942916.2| PREDICTED: ribosome-recycling factor, mitochondrial-like
[Acyrthosiphon pisum]
Length = 176
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 10/83 (12%)
Query: 1 MEMLWSRGLECRRDKFQDQSS-FV----VTKEHRESLSKNAKALFVKCKENIRDIQNKYT 55
+E L + G+ QD++S F+ VTKEHRE+LSK AKALF+K K++I+++QNK
Sbjct: 72 LESLKASGMNLNPQ--QDKTSIFIPIPKVTKEHRENLSKGAKALFIKTKDSIKELQNKNI 129
Query: 56 KTVKNKEKSEGLSQDDVRSVSEQ 78
K +K+ ++ L+ D V ++ +Q
Sbjct: 130 KVLKD---NDALATDLVHTLQDQ 149
>gi|307191744|gb|EFN75186.1| Ribosome-recycling factor, mitochondrial [Harpegnathos saltator]
Length = 248
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%), Gaps = 3/49 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDV 72
VTKEHRE+LSKNAK +VKC +N+RDI+NK K++K + E L++D V
Sbjct: 169 VTKEHRETLSKNAKGFYVKCCDNVRDIRNKQIKSLK---REESLAKDLV 214
>gi|195129487|ref|XP_002009187.1| GI13908 [Drosophila mojavensis]
gi|193920796|gb|EDW19663.1| GI13908 [Drosophila mojavensis]
Length = 266
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE LSKNAKALF+K ++ IRDIQN + +K K +++DDV + Q
Sbjct: 188 VTKEHRELLSKNAKALFIKYRDAIRDIQNAQIRKLK---KQTDVAKDDVFAAQTQ 239
>gi|195020953|ref|XP_001985300.1| GH14583 [Drosophila grimshawi]
gi|193898782|gb|EDV97648.1| GH14583 [Drosophila grimshawi]
Length = 262
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE LSKNAKALF+K ++ IRDIQN + +K K +++DDV + Q
Sbjct: 184 VTKEHREHLSKNAKALFIKHRDAIRDIQNAEIRKLK---KQTDIAKDDVFAAQTQ 235
>gi|328723889|ref|XP_001942966.2| PREDICTED: ribosome-recycling factor, mitochondrial-like
[Acyrthosiphon pisum]
Length = 274
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 8/67 (11%)
Query: 17 QDQSSFV-----VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDD 71
QD++S VTKEHRE+LSK AKALF+K K++I+++QNK K +K+ ++ L+ D
Sbjct: 184 QDKTSIFIPIPKVTKEHRENLSKGAKALFIKTKDSIKELQNKNIKVLKD---NDALATDL 240
Query: 72 VRSVSEQ 78
V ++ +Q
Sbjct: 241 VHTLQDQ 247
>gi|321466374|gb|EFX77370.1| hypothetical protein DAPPUDRAFT_305846 [Daphnia pulex]
Length = 288
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEK--SEGLS---QDDVRSVSEQ 78
VT+E+RE+L+KNAK +F K K++ RDIQN+Y + VK KEK S LS Q +++++EQ
Sbjct: 209 VTREYRENLAKNAKTMFQKFKDHSRDIQNRYIRDVKKKEKEVSSDLSHSVQQQIQTMTEQ 268
Query: 79 SAFE 82
E
Sbjct: 269 YVVE 272
>gi|242022121|ref|XP_002431490.1| ribosome recycling factor, putative [Pediculus humanus corporis]
gi|212516778|gb|EEB18752.1| ribosome recycling factor, putative [Pediculus humanus corporis]
Length = 248
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEK 63
VT+EHRE L+K AK FVKCK++IR++Q KYTK + N EK
Sbjct: 168 VTREHRELLAKKAKMYFVKCKDSIREVQMKYTKKLNNVEK 207
>gi|350414945|ref|XP_003490481.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Bombus
impatiens]
Length = 268
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 3/47 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQD 70
VTKEHRESL+K AK FVKCK I DI+N++ +KN +K EGL +D
Sbjct: 190 VTKEHRESLAKTAKQYFVKCKNIISDIRNEH---IKNLKKKEGLPKD 233
>gi|345497349|ref|XP_001602891.2| PREDICTED: ribosome-recycling factor, mitochondrial-like [Nasonia
vitripennis]
Length = 286
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+LSKNAKA++++ ++ I+DI+ +K +KN +K + +S+D +R V Q
Sbjct: 207 VTKEHRENLSKNAKAIYIRYRDEIKDIR---SKAIKNLKKRKDVSEDSIRRVQSQ 258
>gi|24661488|ref|NP_648302.2| CG4447 [Drosophila melanogaster]
gi|7294968|gb|AAF50297.1| CG4447 [Drosophila melanogaster]
gi|201065901|gb|ACH92360.1| FI06490p [Drosophila melanogaster]
Length = 254
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+LSKNAKALFVK ++ IR +QN++ + +K K L +DD + Q
Sbjct: 177 VTKEHRENLSKNAKALFVKYRDAIRGVQNEHIRKLK---KQPELGKDDAFAAQAQ 228
>gi|17861680|gb|AAL39317.1| GH21184p [Drosophila melanogaster]
Length = 254
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+LSKNAKALFVK ++ IR +QN++ + +K K L +DD + Q
Sbjct: 177 VTKEHRENLSKNAKALFVKYRDAIRGVQNEHIRKLK---KQPELGKDDAFAAQAQ 228
>gi|332027531|gb|EGI67608.1| Ribosome-recycling factor, mitochondrial [Acromyrmex echinatior]
Length = 146
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 9/68 (13%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQSAFES 83
VTKE RE LSKNAK+ +VKC +N+R ++NK K VK KEK L++D V + ES
Sbjct: 67 VTKEQREILSKNAKSFYVKCCDNVRQVRNKQIKAVKQKEK---LAKDLVFRI------ES 117
Query: 84 YHGFISGE 91
Y +S +
Sbjct: 118 YIDILSHQ 125
>gi|346464565|gb|AEO32127.1| hypothetical protein [Amblyomma maculatum]
Length = 209
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQSAFE 82
+TKEHRESL+KNA+ LF K KE++ I+ KYTK KNK+ + S+D + S Q E
Sbjct: 133 ITKEHRESLAKNARTLFAKAKEDLLGIERKYTKESKNKQNA---SEDLTYNASLQVKME 188
>gi|198467224|ref|XP_001354314.2| GA18189 [Drosophila pseudoobscura pseudoobscura]
gi|198149556|gb|EAL31367.2| GA18189 [Drosophila pseudoobscura pseudoobscura]
Length = 261
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+LSKNAKALFVK ++ IR++QN + + +K K + +DD + Q
Sbjct: 183 VTKEHRENLSKNAKALFVKYRDAIRNVQNDHIRKLK---KQPDVGKDDAFAAQTQ 234
>gi|442755303|gb|JAA69811.1| Putative translation [Ixodes ricinus]
Length = 263
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTV-KNKEKSEGLSQDDVRSVSEQSAFE 82
VT+EHRE+LSKNAK LF K KE++ I+ KY K + KNK G+S+D V + S Q E
Sbjct: 184 VTREHRETLSKNAKTLFTKAKEDLVAIERKYLKEIQKNK---LGISEDVVYNASLQVKME 240
Query: 83 S 83
+
Sbjct: 241 T 241
>gi|195377904|ref|XP_002047727.1| GJ11766 [Drosophila virilis]
gi|194154885|gb|EDW70069.1| GJ11766 [Drosophila virilis]
Length = 260
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE LSKNAKA+F+K ++ IRDIQN + +K K + +DD + Q
Sbjct: 182 VTKEHREHLSKNAKAMFIKYRDAIRDIQNTQIRKLK---KQTDIGKDDAFAAQTQ 233
>gi|58378683|ref|XP_308944.2| AGAP006804-PA [Anopheles gambiae str. PEST]
gi|55246028|gb|EAA04181.2| AGAP006804-PA [Anopheles gambiae str. PEST]
Length = 273
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 11/60 (18%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQSAFES 83
VT+EHRE L+KNAK LF+KC++ I+D QN+ K +K + +VSE AF++
Sbjct: 195 VTREHREGLAKNAKVLFIKCRDRIKDAQNQSIKKLKKQS-----------NVSEDEAFQA 243
>gi|195490897|ref|XP_002093333.1| GE20827 [Drosophila yakuba]
gi|194179434|gb|EDW93045.1| GE20827 [Drosophila yakuba]
Length = 254
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+LSKNAKALFVK ++ IR +QN+ + +K K L +DD + Q
Sbjct: 177 VTKEHRENLSKNAKALFVKYRDAIRGVQNEQIRKLK---KQPELGKDDAFAAQAQ 228
>gi|194867771|ref|XP_001972146.1| GG15364 [Drosophila erecta]
gi|190653929|gb|EDV51172.1| GG15364 [Drosophila erecta]
Length = 254
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+LSKNAKALFVK ++ IR +QN+ + +K K L +DD + Q
Sbjct: 177 VTKEHRENLSKNAKALFVKYRDAIRGVQNEQIRKLK---KQPELGKDDAFAAQAQ 228
>gi|312371081|gb|EFR19345.1| hypothetical protein AND_22651 [Anopheles darlingi]
Length = 273
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVK 59
VT+EHRE L+KNAK LF+KC++ I+D QN+ K +K
Sbjct: 196 VTREHREGLAKNAKVLFIKCRDRIKDAQNQSIKKLK 231
>gi|340714837|ref|XP_003395930.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-recycling factor,
mitochondrial-like [Bombus terrestris]
Length = 230
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 3/47 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQD 70
VTKEHRESL+K AK FVKCK I DI+N++ + +K K EGL +D
Sbjct: 152 VTKEHRESLAKTAKQYFVKCKNIICDIRNEHIRDLK---KXEGLPKD 195
>gi|195429112|ref|XP_002062608.1| GK17631 [Drosophila willistoni]
gi|194158693|gb|EDW73594.1| GK17631 [Drosophila willistoni]
Length = 257
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDD 71
VTKEHRE LSKNAKAL++K ++ IR +QN + + K K++++ + +DD
Sbjct: 178 VTKEHREHLSKNAKALYIKYRDAIRQVQNDHIR--KLKKQADDIGKDD 223
>gi|346473595|gb|AEO36642.1| hypothetical protein [Amblyomma maculatum]
Length = 276
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTV-KNKEKSEGLSQDDVRSVSEQSAFE 82
+TKEHRESL+KNA+ LF K KE++ I+ KYTK + KNK+ + S+D + S Q E
Sbjct: 197 ITKEHRESLAKNARTLFAKAKEDLLGIERKYTKEIQKNKQNA---SEDLTYNASLQVKME 253
>gi|195167879|ref|XP_002024760.1| GL22438 [Drosophila persimilis]
gi|194108165|gb|EDW30208.1| GL22438 [Drosophila persimilis]
Length = 105
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
V+K HRE+LSKNAKALFVK ++ IR++QN + + +K K + QDD + Q
Sbjct: 27 VSKVHRENLSKNAKALFVKYRDAIRNVQNDHIRKLK---KQPDVGQDDAFAAQTQ 78
>gi|194751343|ref|XP_001957986.1| GF10686 [Drosophila ananassae]
gi|190625268|gb|EDV40792.1| GF10686 [Drosophila ananassae]
Length = 255
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+LSKNAKALFVK ++ IR +Q ++ + +K K L +DD + Q
Sbjct: 178 VTKEHRENLSKNAKALFVKYRDAIRGVQMEHIRKLK---KQPELGKDDAFAAQAQ 229
>gi|170036921|ref|XP_001846309.1| ribosome recycling factor, mitochondrial [Culex quinquefasciatus]
gi|167879937|gb|EDS43320.1| ribosome recycling factor, mitochondrial [Culex quinquefasciatus]
Length = 259
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQD 70
VT+EHRE L+KNAK LF+KC++ I+D QN K +K K +S+D
Sbjct: 180 VTREHREGLAKNAKTLFIKCRDAIKDAQNGQIKKLK---KQTDISED 223
>gi|427782917|gb|JAA56910.1| Putative translation [Rhipicephalus pulchellus]
Length = 262
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTV-KNKEK-SEGLS 68
+TKEHRESL+KNAK LF K KE++ I+ KY K + KNK+ SE LS
Sbjct: 183 ITKEHRESLAKNAKTLFNKAKEDLLSIERKYIKEIQKNKQNVSEDLS 229
>gi|328779227|ref|XP_623856.3| PREDICTED: ribosome-recycling factor, mitochondrial-like [Apis
mellifera]
Length = 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKS 64
+TKEHRE L+K AK F KCK+ I DI+N+Y K +KN E +
Sbjct: 128 ITKEHREVLTKMAKQYFNKCKDIISDIRNEYVKELKNYENA 168
>gi|443707091|gb|ELU02846.1| hypothetical protein CAPTEDRAFT_226887 [Capitella teleta]
Length = 291
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQSAF 81
VT+E+RE+L+KNAK L K K +R+I N YTK + +K++ S++ ++++ + F
Sbjct: 210 VTREYRENLAKNAKILCDKAKVKLRNIHNHYTKEINAAKKNQDASKELLKNLEDHVHF 267
>gi|383865156|ref|XP_003708041.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Megachile
rotundata]
Length = 198
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVK 59
VTKE+RESL KNAK FV CK I DI+N+Y+K ++
Sbjct: 120 VTKEYRESLVKNAKKYFVTCKTAISDIRNEYSKKLQ 155
>gi|225711692|gb|ACO11692.1| Ribosome recycling factor, mitochondrial precursor [Caligus
rogercresseyi]
Length = 260
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKN 60
VT+E+RE LSK AKA F+K KE R IQN Y +N
Sbjct: 178 VTREYREQLSKGAKASFLKAKEGFRRIQNNYISAAQN 214
>gi|410904297|ref|XP_003965628.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Takifugu
rubripes]
Length = 210
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 12 RRDKFQDQSSFVVTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDD 71
RR+ F D VT+EHRE+L+K AK L K KE++R +++ + K EG S+D
Sbjct: 121 RREVFNDVCLRRVTREHRENLAKVAKQLANKAKESLRRVRSGA--VTQAKRTKEGHSEDT 178
Query: 72 VRSVSEQ 78
VR V +Q
Sbjct: 179 VRLVEKQ 185
>gi|390363236|ref|XP_792740.2| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 2
[Strongylocentrotus purpuratus]
Length = 311
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+L K+AK + K K NIR ++KY V+ + EG S+D + + +Q
Sbjct: 233 VTKEHRENLVKSAKGMCDKAKVNIRGARSKYISLVRKHK--EGTSKDTIFRLEQQ 285
>gi|260810957|ref|XP_002600189.1| hypothetical protein BRAFLDRAFT_204166 [Branchiostoma floridae]
gi|229285475|gb|EEN56201.1| hypothetical protein BRAFLDRAFT_204166 [Branchiostoma floridae]
Length = 206
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+L+K AKA K KE IRDI+N+ K K + + +S+D VR V +Q
Sbjct: 129 VTKEHRENLAKKAKAGCNKTKEQIRDIRNQAMKEAKKAKAT--VSEDTVRLVEKQ 181
>gi|391332637|ref|XP_003740739.1| PREDICTED: ribosome-recycling factor, mitochondrial-like
[Metaseiulus occidentalis]
Length = 237
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQSAFES 83
VT+E RE ++K+AKALF K K+ + ++ K +K ++N + EG S D V ++Q +E+
Sbjct: 160 VTREQREQMAKSAKALFQKTKDQLLQLERKSSKEIQNNK--EGQSSDLVFHATQQVKYET 217
>gi|390363238|ref|XP_003730325.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 1
[Strongylocentrotus purpuratus]
Length = 257
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VTKEHRE+L K+AK + K K NIR ++KY V ++ EG S+D + + +Q
Sbjct: 179 VTKEHRENLVKSAKGMCDKAKVNIRGARSKYISLV--RKHKEGTSKDTIFRLEQQ 231
>gi|348513703|ref|XP_003444381.1| PREDICTED: ribosome-recycling factor, mitochondrial-like
[Oreochromis niloticus]
Length = 258
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE+L+K AK L K K+++R +++ VK + EG S+D +R V +Q
Sbjct: 181 VTREHRENLAKVAKQLSNKAKDSLRRVRSNAVTQVKKAK--EGHSEDTIRLVEKQ 233
>gi|432886252|ref|XP_004074876.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Oryzias
latipes]
Length = 254
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
V++EHRE+L+K AK L K KE++R +++ VK + EG S+D +R + +Q
Sbjct: 177 VSREHRENLAKLAKQLSNKAKESLRSVRSNAVSQVKKSK--EGHSEDILRLIEKQ 229
>gi|291237422|ref|XP_002738637.1| PREDICTED: mitochondrial ribosome recycling factor-like
[Saccoglossus kowalevskii]
Length = 97
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVK 59
VT+EHRE LSK AK + K K N+R++++K +K
Sbjct: 19 VTREHREHLSKTAKTMCDKAKVNVRNVRSKVMNDIK 54
>gi|148670216|gb|EDL02163.1| mCG10533, isoform CRA_c [Mus musculus]
Length = 345
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDI-QNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
+T+EHRE L K AK K KEN+R + N K K+K+K+ S+D +R + +Q
Sbjct: 185 LTREHREMLVKLAKQNTNKAKENLRKVCTNAMNKLKKSKDKT---SEDTIRLMEKQ 237
>gi|148670214|gb|EDL02161.1| mCG10533, isoform CRA_a [Mus musculus]
Length = 332
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDI-QNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
+T+EHRE L K AK K KEN+R + N K K+K+K+ S+D +R + +Q
Sbjct: 185 LTREHREMLVKLAKQNTNKAKENLRKVCTNAMNKLKKSKDKT---SEDTIRLMEKQ 237
>gi|209736906|gb|ACI69322.1| Ribosome recycling factor, mitochondrial precursor [Salmo salar]
Length = 265
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE+L+K AK K KE++R +++ VK + + +S+D +R V +Q
Sbjct: 188 VTREHRENLAKLAKQFSNKAKESLRKVRSNAITQVKKAK--DTVSEDTIRLVEKQ 240
>gi|56605784|ref|NP_001008355.1| ribosome-recycling factor, mitochondrial precursor [Rattus
norvegicus]
gi|62900751|sp|Q5RKI9.1|RRFM_RAT RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
AltName: Full=Ribosome-releasing factor, mitochondrial;
Flags: Precursor
gi|55715664|gb|AAH85779.1| Mitochondrial ribosome recycling factor [Rattus norvegicus]
Length = 262
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQ-NKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE L K AK K KEN+R ++ N K K+K+K+ S+D +R + +Q
Sbjct: 185 VTREHREMLVKLAKQNTNKAKENLRKVRTNAMNKLKKSKDKT---SEDTIRLIEKQ 237
>gi|209736400|gb|ACI69069.1| Ribosome recycling factor, mitochondrial precursor [Salmo salar]
Length = 231
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE+L+K AK K KE++R +++ VK + + +S+D +R V +Q
Sbjct: 154 VTREHRENLAKLAKQFSNKAKESLRKVRSNAITQVKKAK--DTVSEDTIRLVEKQ 206
>gi|149038905|gb|EDL93125.1| rCG45505 [Rattus norvegicus]
Length = 239
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQ-NKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE L K AK K KEN+R ++ N K K+K+K+ S+D +R + +Q
Sbjct: 185 VTREHREMLVKLAKQNTNKAKENLRKVRTNAMNKLKKSKDKT---SEDTIRLIEKQ 237
>gi|354500647|ref|XP_003512410.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 2
[Cricetulus griseus]
Length = 210
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQ-NKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE L K AK K KEN+R ++ N K K+K+K+ S+D +R + +Q
Sbjct: 133 VTREHREMLVKLAKQNTNKAKENLRKVRTNAMNKLKKSKDKT---SEDTIRLIEKQ 185
>gi|354500645|ref|XP_003512409.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 1
[Cricetulus griseus]
gi|344241260|gb|EGV97363.1| Ribosome-recycling factor, mitochondrial [Cricetulus griseus]
Length = 262
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQ-NKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE L K AK K KEN+R ++ N K K+K+K+ S+D +R + +Q
Sbjct: 185 VTREHREMLVKLAKQNTNKAKENLRKVRTNAMNKLKKSKDKT---SEDTIRLIEKQ 237
>gi|21312752|ref|NP_080698.1| ribosome-recycling factor, mitochondrial precursor [Mus musculus]
gi|62901049|sp|Q9D6S7.1|RRFM_MOUSE RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
AltName: Full=Ribosome-releasing factor, mitochondrial;
Flags: Precursor
gi|12845172|dbj|BAB26646.1| unnamed protein product [Mus musculus]
gi|18044179|gb|AAH19787.1| Mitochondrial ribosome recycling factor [Mus musculus]
gi|26328197|dbj|BAC27839.1| unnamed protein product [Mus musculus]
Length = 262
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQ-NKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE L K AK K KEN+R ++ N K K+K+K+ S+D +R + +Q
Sbjct: 185 VTREHREMLVKLAKQNTNKAKENLRKVRTNAMNKLKKSKDKT---SEDTIRLIEKQ 237
>gi|148676726|gb|EDL08673.1| mCG22269 [Mus musculus]
Length = 237
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQ-NKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE L K AK K KEN+R ++ N K K+K+K+ S+D +R + +Q
Sbjct: 185 VTREHREMLVKLAKQNTNKAKENLRKVRTNAMNKLKKSKDKT---SEDTIRLIEKQ 237
>gi|118404150|ref|NP_001072392.1| mitochondrial ribosome recycling factor [Xenopus (Silurana)
tropicalis]
gi|111305781|gb|AAI21590.1| mitochondrial ribosome recycling factor [Xenopus (Silurana)
tropicalis]
Length = 252
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE+L+K AK L K K+++R + + VK + EG+S+D V+ + +Q
Sbjct: 175 VTREHRENLTKLAKQLTNKAKDSLRKARTGAVQEVKKCK--EGVSEDIVKLLEKQ 227
>gi|410979001|ref|XP_003995875.1| PREDICTED: ribosome-recycling factor, mitochondrial [Felis catus]
Length = 336
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQ-NKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE L K AK K K+++R ++ N K K+K+K +S+D +R + +Q
Sbjct: 259 VTREHREMLVKLAKQNTNKAKDSLRKVRTNAMNKLKKSKDK---VSEDTIRLIEKQ 311
>gi|406931108|gb|EKD66421.1| hypothetical protein ACD_49C00044G0023 [uncultured bacterium (gcode
4)]
Length = 181
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVR 73
+T+E R L+K AK L K IR+I+ Y K +KN E S+ +S+D V+
Sbjct: 101 LTEERRRDLAKFAKKLAEDGKIAIRNIRQDYLKKIKNAESSKEISEDIVK 150
>gi|291000412|ref|XP_002682773.1| predicted protein [Naegleria gruberi]
gi|284096401|gb|EFC50029.1| predicted protein [Naegleria gruberi]
Length = 174
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDI-QNKYTKTVKNKEKSEGLSQDDV 72
+TKE RE++ KNAK + K+ IRD+ +N TK K + EG S+DD+
Sbjct: 97 MTKEMRENVVKNAKKIAEGAKDKIRDLRRNGMTKI---KAQKEGASKDDI 143
>gi|407013436|gb|EKE27583.1| hypothetical protein ACD_3C00189G0002 [uncultured bacterium (gcode
4)]
Length = 181
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 23 VVTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQD 70
++T+E R L K AK L + K IR+I+ Y K +KN E S+ +S+D
Sbjct: 100 MLTEERRRDLVKFAKKLSEEWKIAIRNIRQDYIKKIKNAETSKEISED 147
>gi|297270213|ref|XP_001089220.2| PREDICTED: ribosome-recycling factor, mitochondrial isoform 1
[Macaca mulatta]
Length = 336
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQ 78
VT+EHRE+L K AK K K+++R ++ K K+ + +S+D +R V +Q
Sbjct: 259 VTREHRETLVKLAKQNTNKAKDSLRKVRTNAMN--KLKKSKDTVSEDTIRLVEKQ 311
>gi|196003386|ref|XP_002111560.1| hypothetical protein TRIADDRAFT_55709 [Trichoplax adhaerens]
gi|190585459|gb|EDV25527.1| hypothetical protein TRIADDRAFT_55709 [Trichoplax adhaerens]
Length = 247
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 24 VTKEHRESLSKNAKALFVKCKENIRDIQNKYTKTVKNKEKSEGLSQDDV 72
+TKE RE + K AK+ K K NIR ++ Y +K K +G+S+DDV
Sbjct: 170 MTKEQREKIVKTAKSSCDKAKVNIRRVRQNYMNDLK---KLKGVSEDDV 215
>gi|407411300|gb|EKF33432.1| mitochondrial DNA polymerase I protein D, putative [Trypanosoma cruzi
marinkellei]
Length = 1650
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 34 KNAKALFVKCKEN--IRDIQNKYTKTVKNKEKSEGLSQDDVRSVSEQSAFESYHG 86
KN + FVK ++ I Q +Y VK +S GL+QD VR + E+ E+YHG
Sbjct: 1418 KNKEPEFVKLRQQAKIFSFQRQYGAGVKMISQSTGLTQDQVRHLIEKER-ETYHG 1471
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.128 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,334,055,548
Number of Sequences: 23463169
Number of extensions: 40293607
Number of successful extensions: 136895
Number of sequences better than 100.0: 365
Number of HSP's better than 100.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 136608
Number of HSP's gapped (non-prelim): 368
length of query: 96
length of database: 8,064,228,071
effective HSP length: 65
effective length of query: 31
effective length of database: 6,539,122,086
effective search space: 202712784666
effective search space used: 202712784666
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)