RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9117
         (61 letters)



>d2akza2 d.54.1.1 (A:1-139) Enolase {Human (Homo sapiens), gamma
           isoform [TaxId: 9606]}
          Length = 139

 Score = 84.6 bits (209), Expect = 7e-24
 Identities = 35/55 (63%), Positives = 46/55 (83%)

Query: 7   LVTLSFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLY 61
           L++    V +Q+++D  M++LDGTENKSKFGANAILGVSLAV KAGAA++ +PLY
Sbjct: 76  LISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAGAAERELPLY 130


>d2al1a2 d.54.1.1 (A:1-141) Enolase {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 141

 Score = 80.8 bits (199), Expect = 3e-22
 Identities = 34/55 (61%), Positives = 42/55 (76%)

Query: 7   LVTLSFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLY 61
            V  + +V  QK +D+F+I LDGT NKSK GANAILGVSLA ++A AA+K VPLY
Sbjct: 76  FVKANIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLY 130


>d2ptza2 d.54.1.1 (A:0-138) Enolase {Trypanosoma brucei [TaxId:
           5691]}
          Length = 139

 Score = 76.2 bits (187), Expect = 2e-20
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query: 12  FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLY 61
            +  +Q+E+D  M++LDGT NK K GANAILG S+A++KA AA KGVPLY
Sbjct: 81  RDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLY 130


>d1pdza2 d.54.1.1 (A:1-139) Enolase {European lobster (Homarus
           vulgaris) [TaxId: 6707]}
          Length = 139

 Score = 73.9 bits (181), Expect = 1e-19
 Identities = 39/56 (69%), Positives = 45/56 (80%)

Query: 6   NLVTLSFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLY 61
            ++    +VTQQKE DEFM KLDGTENKS  GANAILGVSLA+ KAGAA+ G+PLY
Sbjct: 75  EIIKSGLKVTQQKECDEFMCKLDGTENKSSLGANAILGVSLAICKAGAAELGIPLY 130


>d2fyma2 d.54.1.1 (A:1-139) Enolase {Escherichia coli [TaxId: 562]}
          Length = 139

 Score = 71.2 bits (174), Expect = 1e-18
 Identities = 35/45 (77%), Positives = 37/45 (82%)

Query: 17  QKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLY 61
           Q  ID+ MI LDGTENKSKFGANAIL VSLA AKA AA KG+PLY
Sbjct: 86  QAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLY 130


>d1w6ta2 d.54.1.1 (A:1-137) Enolase {Streptococcus pneumoniae
           [TaxId: 1313]}
          Length = 137

 Score = 66.9 bits (163), Expect = 5e-17
 Identities = 30/50 (60%), Positives = 36/50 (72%)

Query: 12  FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLY 61
           ++V  Q+ ID  MI LDGT NK K GANAILGVS+AVA+A A    +PLY
Sbjct: 82  YDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLY 131


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.135    0.360 

Gapped
Lambda     K      H
   0.267   0.0572    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 193,256
Number of extensions: 6071
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 6
Length of query: 61
Length of database: 2,407,596
Length adjustment: 31
Effective length of query: 30
Effective length of database: 1,981,966
Effective search space: 59458980
Effective search space used: 59458980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.2 bits)