BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9119
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04PP8|MSRA_LEPBJ Peptide methionine sulfoxide reductase MsrA OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
GN=msrA PE=3 SV=1
Length = 176
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 6 EHRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMIL 59
++R +C+ +G H E Q+ FD VISY EIL IFW HDPT + TQYRS+IL
Sbjct: 40 DYRSVCSGTTG-HAETVQITFDSKVISYFEILEIFWISHDPTTLNRQGNDVGTQYRSIIL 98
Query: 60 HVNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
+ +PE K+ AE+S+ + PI T V K FY AE++
Sbjct: 99 YHSPEQKKQAEQSIQKAGEHFSDPIVTQVEILKEFYPAEDY 139
>sp|A8G8X6|MSRA_SERP5 Peptide methionine sulfoxide reductase MsrA OS=Serratia
proteamaculans (strain 568) GN=msrA PE=3 SV=1
Length = 213
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 12/104 (11%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILH 60
+R +C+ +G HTEV +V FDP +ISYK++L++FW++HDP M+ TQYRS I
Sbjct: 84 YREVCSGQTG-HTEVVRVVFDPKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYRSAIYT 142
Query: 61 VNPEDKEVAEKSL-----AEEKTKHRKPITTLVVPFKRFYDAEE 99
+ PE + AE SL A E+ ++ ITT V P FY AE+
Sbjct: 143 LTPEQQTEAESSLQRFQQAMEQAGDKRAITTEVAPALPFYYAED 186
>sp|P08761|MSRA_DROME Peptide methionine sulfoxide reductase OS=Drosophila melanogaster
GN=Eip71CD PE=2 SV=2
Length = 246
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 8/111 (7%)
Query: 16 GDHTEVTQVDFDPSVISYKEILRIFWKHHD--PTVQMKTQYRSMILHVNPEDKEVAEKSL 73
GDHTEV ++D+DP+VIS+KE+L +FW +H+ T +K QY S+IL+ + E K+VA S
Sbjct: 83 GDHTEVLEIDYDPTVISFKELLDLFWNNHEYGLTTPIKRQYASLILYHDEEQKQVAHASK 142
Query: 74 AEEKTKHRKP--ITTLVVPFKRFYDAEEWPRRVSLRRRRNIG---NPSPHL 119
EE+ + R P ITT + + FY AE + ++ L+ +++ N SP L
Sbjct: 143 LEEQER-RAPEIITTEIASKENFYPAEAYHQKYRLQGHKDLASSLNLSPKL 192
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 12/128 (9%)
Query: 124 HDSMTRKTLRASAQVELQERRLLQNLPPSGTPERLCRGLNNRL-LFSLHSYHQKYRLRQH 182
HD ++ AS ++E QERR PE + + ++ + +YHQKYRL+ H
Sbjct: 130 HDEEQKQVAHAS-KLEEQERR---------APEIITTEIASKENFYPAEAYHQKYRLQGH 179
Query: 183 SELQPKLNFKSEDCYKTSHLAARLNGYVVGFGGIKQFEEEADQLGLSEDVKNYVRKYVKR 242
+L LN S +TS++A +LNGY+ G GGI+QF+ EA+ +GL+ + Y +V++
Sbjct: 180 KDLASSLNL-SPKLLQTSYVATKLNGYLAGVGGIEQFKAEAETMGLTPTQRQYCYYHVEQ 238
Query: 243 YEGSGMMC 250
EG G+ C
Sbjct: 239 NEGQGLYC 246
>sp|Q4J9L3|MSRA_SULAC Peptide methionine sulfoxide reductase MsrA OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=msrA PE=3 SV=2
Length = 176
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 7/97 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILHVNP 63
+CT +G H EV Q+ FDPSVI+Y+E+L IF++ HDPT + +QYRS+IL+ +
Sbjct: 44 VCTDETG-HAEVVQITFDPSVITYRELLEIFFEIHDPTTPNRQGNDVGSQYRSIILYHSE 102
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
E K++AE+ + + K K + T +VPF+ FY+AE++
Sbjct: 103 EQKKIAEEMIKLYERKLGKKVVTELVPFEAFYEAEDY 139
>sp|Q97Y45|MSRA_SULSO Peptide methionine sulfoxide reductase MsrA OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=msrA PE=3 SV=1
Length = 177
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 7/100 (7%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILH 60
+ +CT +G H EV Q+ FD S+ISY+EIL IF++ HDPT + TQYRS+IL+
Sbjct: 41 YEDVCTDTTG-HAEVVQITFDSSIISYREILEIFFEIHDPTTLNRQGNDVGTQYRSIILY 99
Query: 61 VNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
N E +++AE+ + E + + K + T + PF+ FY+AE++
Sbjct: 100 HNEEQRKIAEEMIREVEKRIGKKVVTELKPFEVFYEAEDY 139
>sp|Q055M2|MSRA_LEPBL Peptide methionine sulfoxide reductase MsrA OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain L550)
GN=msrA PE=3 SV=1
Length = 176
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 6 EHRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMIL 59
++R +C+ +G H E Q+ FD VISY EIL IFW HDPT + QYRS+I
Sbjct: 40 DYRSVCSGTTG-HAETVQITFDSKVISYFEILEIFWISHDPTTLNRQGNDVGIQYRSIIP 98
Query: 60 HVNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
+ +PE K+ AE+S+ + PI T V K FY AE++
Sbjct: 99 YHSPEQKKQAEQSIQKAGEHFSDPIVTQVEILKEFYPAEDY 139
>sp|Q747V4|MSRA_GEOSL Peptide methionine sulfoxide reductase MsrA OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=msrA PE=3 SV=1
Length = 162
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 9/98 (9%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPT------VQMKTQYRSMILHVNP 63
+C+ +G H EV +V FDP+ ++Y +LR+FW HDPT + T YRS+I + +P
Sbjct: 50 VCSKTTG-HAEVVEVTFDPAAVTYDHLLRVFWDCHDPTQLNRQGPDIGTNYRSVIFYHSP 108
Query: 64 EDKEVAEKSLAEEK--TKHRKPITTLVVPFKRFYDAEE 99
+ + A SL E+ +H +PI T +VP F+ AEE
Sbjct: 109 DQERAARASLEHEQRSGRHARPIVTEIVPAATFWWAEE 146
>sp|Q8TQV6|MSRA_METAC Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=msrA PE=3 SV=1
Length = 188
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQ------MKTQYRSMILHVNP 63
+CT+ +G H E +V FDP V+SYK +L +FWK HDPT + + QYRS+I + N
Sbjct: 71 VCTLDTG-HAEAVRVIFDPKVVSYKNLLDVFWKIHDPTTKNRQGPDVGKQYRSVIFYHNE 129
Query: 64 EDK--EVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
E K +A K E+ + PI T +VP FY AE++
Sbjct: 130 EQKAAALASKEELEKAGVFKNPIVTEIVPVSEFYMAEDY 168
>sp|A7MM56|MSRA_CROS8 Peptide methionine sulfoxide reductase MsrA OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=msrA PE=3 SV=1
Length = 212
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILH 60
+R +C+ +G H E +V +DP+VISY+++L++FW++HDP M+ TQYRS I
Sbjct: 83 YREVCSGQTG-HAEAVRVVYDPNVISYEQLLQVFWENHDPAQGMRQGNDVGTQYRSAIYP 141
Query: 61 VNPEDKEVAEKSL-----AEEKTKHRKPITTLVVPFKRFYDAEE 99
+ PE + A+ SL A E + ITT + P K FY AE+
Sbjct: 142 LTPEQEAAAQASLERFRAAMEAAGDYRHITTEIAPAKPFYYAED 185
>sp|Q6LYY1|MSRA_METMP Peptide methionine sulfoxide reductase MsrA OS=Methanococcus
maripaludis (strain S2 / LL) GN=msrA PE=3 SV=1
Length = 157
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMKT------QYRSMILHVNP 63
+C SG H EV ++D+DP +ISY E+L +FW +H+PT K QY S I + +
Sbjct: 47 VCRGKSG-HIEVVKIDYDPEIISYDELLDLFWNNHNPTTPNKQGWDVGEQYSSYIFYFDD 105
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRRVSLRRRRNIGN 114
E K +AEKSL + + I T++ FY AEE+ ++ +++ +I N
Sbjct: 106 EQKLIAEKSLEKMQENTDLKIVTIIEKAGSFYPAEEYHQKYFMKKNNSILN 156
>sp|Q7UJK0|MSRA1_RHOBA Peptide methionine sulfoxide reductase MsrA 1 OS=Rhodopirellula
baltica (strain SH1) GN=msrA1 PE=3 SV=2
Length = 192
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPT------VQMKTQYRSMILH 60
++ +C +G H E Q+ +DPS +++E+L++F+K HDPT QYRS I
Sbjct: 56 YKQVCGKMTG-HAEAVQIYYDPSKTNFEELLKVFFKTHDPTTLNRQGADGGPQYRSSIFV 114
Query: 61 VNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRRVSLRRRRNIG 113
N E +E+A+K++ + ++R PI TL+ P +FY AEE+ + RR N G
Sbjct: 115 HNDEQREIAKKTMEKLGEEYRDPIVTLIEPATKFYVAEEY-HQDYYRRNPNAG 166
>sp|P54152|MSRA_FRAAN Peptide methionine sulfoxide reductase OS=Fragaria ananassa PE=2
SV=2
Length = 191
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 8/101 (7%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILH 60
+R +C+ + +H+EV +V FDP V Y ++L +FW HDPT + TQYRS I +
Sbjct: 63 YRLVCSGTT-NHSEVVRVQFDPQVCPYSDLLSVFWSRHDPTTLNRQGGDVGTQYRSGIYY 121
Query: 61 VNPEDKEVAEKSL-AEEKTKHRKPITTLVVPFKRFYDAEEW 100
N E +A+KS A++K K + T ++P KRFY AEE+
Sbjct: 122 YNEEQDCLAKKSKEAKQKEFKDKRVVTEILPAKRFYRAEEY 162
>sp|A7GEN6|MSRA_CLOBL Peptide methionine sulfoxide reductase MsrA OS=Clostridium
botulinum (strain Langeland / NCTC 10281 / Type F)
GN=msrA PE=3 SV=1
Length = 157
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H E + +D S+IS +E+L FW DPTV K TQYR+ I +++
Sbjct: 44 VCSGTTG-HAEACYIKYDESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDE 102
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRR 103
+D V KS ++E+ +RKPI T V P K FY+AEE+ ++
Sbjct: 103 KDLNVIIKSKSQEQKNYRKPIVTEVEPLKCFYEAEEYHQK 142
>sp|B1IMT7|MSRA_CLOBK Peptide methionine sulfoxide reductase MsrA OS=Clostridium
botulinum (strain Okra / Type B1) GN=msrA PE=3 SV=1
Length = 157
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H E + +D S+IS +E+L FW DPTV K TQYR+ I +++
Sbjct: 44 VCSGTTG-HAEACYIKYDESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDQ 102
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRR 103
+D V KS ++E+ +RKPI T V P K FY+AEE+ ++
Sbjct: 103 KDLNVIIKSKSQEQKNYRKPIVTEVEPLKCFYEAEEYHQK 142
>sp|C1FPF1|MSRA_CLOBJ Peptide methionine sulfoxide reductase MsrA OS=Clostridium
botulinum (strain Kyoto / Type A2) GN=msrA PE=3 SV=1
Length = 157
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H E + +D S+IS +E+L FW DPTV K TQYR+ I +++
Sbjct: 44 VCSGVTG-HAEACYIKYDESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTCIFYLDE 102
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRR 103
+D V KS +E+ +RKPI T V P K FY+AEE+ ++
Sbjct: 103 KDLNVIIKSKYQEQKNYRKPIVTEVEPLKCFYEAEEYHQK 142
>sp|Q7XUP7|MSR21_ORYSJ Peptide methionine sulfoxide reductase A2-1 OS=Oryza sativa subsp.
japonica GN=MSRA2-1 PE=2 SV=2
Length = 187
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILH 60
+R +C +G H EV +V +DP Y+ +L +FW H+PT + TQYRS I +
Sbjct: 65 YRDVCGGGTG-HAEVVRVHYDPKACPYEVLLDVFWAKHNPTTLNRQGNDVGTQYRSGIYY 123
Query: 61 VNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRR 103
E ++ A SLAE++ + ++ I T ++P RFY AEE+ +R
Sbjct: 124 YTAEQEKAARDSLAEKQKEWKERIVTEILPATRFYPAEEYHQR 166
>sp|A5I348|MSRA_CLOBH Peptide methionine sulfoxide reductase MsrA OS=Clostridium
botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type
A) GN=msrA PE=3 SV=1
Length = 157
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H E + +D S+IS +E+L FW DPTV K TQYR+ I +++
Sbjct: 44 VCSGVTG-HAEACYIKYDESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDE 102
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRR 103
+D V KS +E+ +RKPI T V P K FY+AEE+ ++
Sbjct: 103 KDLNVIIKSKYQEQKNYRKPIVTEVEPLKCFYEAEEYHQK 142
>sp|A7FUX9|MSRA_CLOB1 Peptide methionine sulfoxide reductase MsrA OS=Clostridium
botulinum (strain ATCC 19397 / Type A) GN=msrA PE=3 SV=1
Length = 157
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H E + +D S+IS +E+L FW DPTV K TQYR+ I +++
Sbjct: 44 VCSGVTG-HAEACYIKYDESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDE 102
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRR 103
+D V KS +E+ +RKPI T V P K FY+AEE+ ++
Sbjct: 103 KDLNVIIKSKYQEQKNYRKPIVTEVEPLKCFYEAEEYHQK 142
>sp|C6DDM6|MSRA_PECCP Peptide methionine sulfoxide reductase MsrA OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=msrA PE=3
SV=1
Length = 212
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 12/104 (11%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILH 60
+R +C+ + DH E +V FDP+VISY ++L++FW++HDP M+ +QYRS I
Sbjct: 83 YREVCSGQT-DHAEAVRVVFDPAVISYDQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYT 141
Query: 61 VNPEDKEVAEKSLAEEKTKHR-----KPITTLVVPFKRFYDAEE 99
+ PE ++ A++SL + R + I+T +VP FY AE+
Sbjct: 142 LTPEQEQAAQESLQRFQQAMREKGDVRAISTEIVPAGPFYYAED 185
>sp|Q8PUD6|MSRA_METMA Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=msrA PE=3 SV=1
Length = 211
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQ------MKTQYRSMILHVNP 63
+CT+ +G H E +V FDP ++SYK +L +FWK HDPT + + QYRS+I + +
Sbjct: 94 VCTLDTG-HAEAVRVIFDPEIVSYKTLLDVFWKIHDPTTKDRQGPDVGKQYRSVIFYHSD 152
Query: 64 EDK--EVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
E K +A K E+ + P+ T +VP FY AE++
Sbjct: 153 EQKAAALASKEELEKSGAFKNPVVTEIVPVSEFYMAEDY 191
>sp|A3CUG3|MSRA_METMJ Peptide methionine sulfoxide reductase MsrA OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=msrA
PE=3 SV=1
Length = 164
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILHVNP 63
+CT +G H EV QV +DP +SY+ +L FW HDPT + TQYRS+I P
Sbjct: 50 VCTGRTG-HAEVVQVTYDPGTVSYRALLDTFWDAHDPTTPNRQGPDIGTQYRSVIFVHTP 108
Query: 64 EDKEVAEKSLAE--EKTKHRKPITTLVVPFKRFYDAEEW 100
E + A S E + K R+PI T + P F+ AEE+
Sbjct: 109 EQEAEARASKEEMDQSGKFRRPIVTAIEPAGTFWRAEEY 147
>sp|Q9FKF7|MSRA1_ARATH Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana
GN=MSRA1 PE=2 SV=1
Length = 202
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILH 60
++ +C+ + +H E+ +V +DP SY+ +L +FW HDPT + TQYRS I
Sbjct: 75 YKDVCSGTT-NHAEIVRVQYDPKECSYQSLLDLFWSKHDPTTLNRQGNDVGTQYRSGIYF 133
Query: 61 VNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEE 99
NPE +++A +SL + + + + T ++P K+FY AEE
Sbjct: 134 YNPEQEKLARESLERHQQQVDRKVVTEILPAKKFYRAEE 172
>sp|B1KU02|MSRA_CLOBM Peptide methionine sulfoxide reductase MsrA OS=Clostridium
botulinum (strain Loch Maree / Type A3) GN=msrA PE=3
SV=1
Length = 157
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 18 HTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNPEDKEVAEK 71
H E + +D S+IS +E+L FW DPTV K TQYR+ I +++ +D + K
Sbjct: 51 HAEACYIKYDESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDEKDLNLIIK 110
Query: 72 SLAEEKTKHRKPITTLVVPFKRFYDAEEWPRR 103
S ++EK +RKPI T V P K FY+AEE+ ++
Sbjct: 111 SKSQEKKNYRKPIVTEVEPLKCFYEAEEYHQK 142
>sp|Q9CN40|MSRA_PASMU Peptide methionine sulfoxide reductase MsrA OS=Pasteurella
multocida (strain Pm70) GN=msrA PE=3 SV=1
Length = 174
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILH 60
++ +CT +G H E +V+FD +VISY+++L IF+ H+PT + TQYR+ I +
Sbjct: 42 YKEVCTGETG-HAEAVKVEFDATVISYEKLLDIFFSIHNPTQLNHQGEDVGTQYRTGIYY 100
Query: 61 VNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRRVSLRRRRN 111
+N E +++A K +AE + + I T V+P + FY AE++ + L+ +N
Sbjct: 101 LNDEQEQLANKKIAELQPHFAEKIVTEVLPAQTFYPAEDYHQGYLLQNPQN 151
>sp|B1JML1|MSRA_YERPY Peptide methionine sulfoxide reductase MsrA OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=msrA
PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|Q66F89|MSRA_YERPS Peptide methionine sulfoxide reductase MsrA OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=msrA
PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|A4TRL2|MSRA_YERPP Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis
(strain Pestoides F) GN=msrA PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|Q1CEI4|MSRA_YERPN Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=msrA PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|A9R574|MSRA_YERPG Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=msrA PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|Q8ZB94|MSRA_YERPE Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis
GN=msrA PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|B2K2M6|MSRA_YERPB Peptide methionine sulfoxide reductase MsrA OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=msrA
PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|Q1CBX8|MSRA_YERPA Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=msrA PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|A7FMV2|MSRA_YERP3 Peptide methionine sulfoxide reductase MsrA OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=msrA PE=3 SV=1
Length = 212
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G H EV +V FDP+VISY+++L+IFW++HDP M+ TQYRS I + P
Sbjct: 86 VCSGRTG-HAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTP 144
Query: 64 EDKEVAEKS-----LAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +E A KS A EK ++ IT+ + FY AE+
Sbjct: 145 EQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAED 185
>sp|A9N540|MSRA_SALPB Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1
Length = 212
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 12/104 (11%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILH 60
+R +C+ +G H E ++ +DP+VISY+++L+IFW++HDPT M+ TQYRS I
Sbjct: 83 YREVCSGQTG-HAEAVRIVYDPAVISYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYP 141
Query: 61 VNPEDKEVAEKSL-----AEEKTKHRKPITTLVVPFKRFYDAEE 99
+ PE A S A +PITT + FY AE+
Sbjct: 142 LTPEQNAAAHASCERFQSAMAAAGDHRPITTEIAHATPFYYAED 185
>sp|C3LRL2|MSRA_VIBCM Peptide methionine sulfoxide reductase MsrA OS=Vibrio cholerae
serotype O1 (strain M66-2) GN=msrA PE=3 SV=1
Length = 212
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G HTEV +V FDP + E+LR FW+ HDPT M+ TQYRS I +
Sbjct: 85 VCSGKTG-HTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSE 143
Query: 64 EDKEVAEKSLAEEK----TKHRKPITTLVVPFKRFYDAEEW 100
+ +E+AE S A + +HR ITT ++P +Y AE +
Sbjct: 144 DQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETY 184
>sp|Q9KP30|MSRA_VIBCH Peptide methionine sulfoxide reductase MsrA OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=msrA PE=3 SV=1
Length = 212
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G HTEV +V FDP + E+LR FW+ HDPT M+ TQYRS I +
Sbjct: 85 VCSGKTG-HTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSE 143
Query: 64 EDKEVAEKSLAEEK----TKHRKPITTLVVPFKRFYDAEEW 100
+ +E+AE S A + +HR ITT ++P +Y AE +
Sbjct: 144 DQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETY 184
>sp|A5F587|MSRA_VIBC3 Peptide methionine sulfoxide reductase MsrA OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=msrA PE=3 SV=1
Length = 212
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILHVNP 63
+C+ +G HTEV +V FDP + E+LR FW+ HDPT M+ TQYRS I +
Sbjct: 85 VCSGKTG-HTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSE 143
Query: 64 EDKEVAEKSLAEEK----TKHRKPITTLVVPFKRFYDAEEW 100
+ +E+AE S A + +HR ITT ++P +Y AE +
Sbjct: 144 DQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETY 184
>sp|Q8Y640|MSRA_LISMO Peptide methionine sulfoxide reductase MsrA OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=msrA PE=3 SV=1
Length = 177
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 2 SVISEHRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPT------VQMKTQYR 55
+V ++ +C+ +G HTE Q+ FDP+V Y++++ ++W+ DPT V YR
Sbjct: 41 TVNPTYKEVCSGTTG-HTEAIQITFDPAVFPYEKLVEVYWQQTDPTDAAGQFVDRGDSYR 99
Query: 56 SMILHVNPEDKEVAEKSLA--EEKTKHRKPITTLVVPFKRFYDAEEW 100
+I + N E KE+AEKS A + + +KPI T + + FY AEE+
Sbjct: 100 PVIFYHNEEQKEIAEKSKAALDASGRFKKPIVTEIAKAETFYPAEEY 146
>sp|B8DDP2|MSRA_LISMH Peptide methionine sulfoxide reductase MsrA OS=Listeria
monocytogenes serotype 4a (strain HCC23) GN=msrA PE=3
SV=1
Length = 177
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 2 SVISEHRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPT------VQMKTQYR 55
+V ++ +C+ +G HTE Q+ FDP+V Y++++ ++W+ DPT V YR
Sbjct: 41 TVNPTYKEVCSGTTG-HTEAIQITFDPAVFPYEKLVEVYWQQTDPTDAAGQFVDRGDSYR 99
Query: 56 SMILHVNPEDKEVAEKSLA--EEKTKHRKPITTLVVPFKRFYDAEEW 100
+I + N E KE+AEKS A + + +KPI T + + FY AEE+
Sbjct: 100 PVIFYHNEEQKEIAEKSKAALDASGRFKKPIVTEIAKAETFYPAEEY 146
>sp|Q6D151|MSRA_ERWCT Peptide methionine sulfoxide reductase MsrA OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=msrA PE=3 SV=1
Length = 212
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILH 60
+R +C+ + DH E +V FDP+ ISY ++L++FW++HDP M+ +QYRS I
Sbjct: 83 YREVCSGQT-DHAEAVRVVFDPATISYSQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYT 141
Query: 61 VNPEDKEVAEKSL-----AEEKTKHRKPITTLVVPFKRFYDAEE 99
+ PE ++ A+ SL A + + I+T + P FY AEE
Sbjct: 142 LTPEQEQAAQASLQRFQQAMRENSDGRAISTEIEPAGPFYYAEE 185
>sp|P54153|MSRA_SOLLC Peptide methionine sulfoxide reductase (Fragment) OS=Solanum
lycopersicum GN=E4 PE=3 SV=1
Length = 196
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILHVNP 63
IC+ + +H E ++ FDP+V Y +L +FW HDPT + QYRS I + N
Sbjct: 71 ICSGTT-EHAEAIRIQFDPNVCPYSNLLSLFWSRHDPTTLNRQGNDVGKQYRSGIYYYND 129
Query: 64 EDKEVAEKSL-AEEKTKHRKPITTLVVPFKRFYDAEEW 100
++A +SL A++K K I T ++P KRFY AEE+
Sbjct: 130 AQAQLARESLEAKQKEFMDKKIVTEILPAKRFYRAEEY 167
>sp|Q71YF6|MSRA_LISMF Peptide methionine sulfoxide reductase MsrA OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=msrA PE=3
SV=1
Length = 177
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 2 SVISEHRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPT------VQMKTQYR 55
+V ++ +C+ +G HTE Q+ FDP+V Y++++ ++W+ DPT V YR
Sbjct: 41 TVNPTYKEVCSGTTG-HTEAIQITFDPAVFPYEKLVEVYWQQTDPTDAAGQFVDRGDSYR 99
Query: 56 SMILHVNPEDKEVAEKSLA--EEKTKHRKPITTLVVPFKRFYDAEEW 100
+I + N E KE+AEKS A + + +KPI T + + FY AEE+
Sbjct: 100 PVIFYHNEEQKEIAEKSKAALDASGRFKKPIVTEIAKAETFYPAEEY 146
>sp|C1KWF9|MSRA_LISMC Peptide methionine sulfoxide reductase MsrA OS=Listeria
monocytogenes serotype 4b (strain CLIP80459) GN=msrA
PE=3 SV=1
Length = 177
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 2 SVISEHRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPT------VQMKTQYR 55
+V ++ +C+ +G HTE Q+ FDP+V Y++++ ++W+ DPT V YR
Sbjct: 41 TVNPTYKEVCSGTTG-HTEAIQITFDPAVFPYEKLVEVYWQQTDPTDAAGQFVDRGDSYR 99
Query: 56 SMILHVNPEDKEVAEKSLA--EEKTKHRKPITTLVVPFKRFYDAEEW 100
+I + N E KE+AEKS A + + +KPI T + + FY AEE+
Sbjct: 100 PVIFYHNEEQKEIAEKSKAALDASGRFKKPIVTEIAKAETFYPAEEY 146
>sp|B9LA36|MSRA_NAUPA Peptide methionine sulfoxide reductase MsrA OS=Nautilia
profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH)
GN=msrA PE=3 SV=1
Length = 173
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILHVNP 63
+CT +G H EV ++D+D + +SY E+L IF+K HDPT + TQYRS+IL+++
Sbjct: 44 VCTGVTG-HAEVVEIDYDENTVSYDELLDIFFKIHDPTQLNRQGNDVGTQYRSIILYLDE 102
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
E KE A K + EE K + T V P + FY AE++
Sbjct: 103 EQKEKALKKI-EELKKEGLNVVTEVKPLEIFYPAEKY 138
>sp|O26635|MSRA_METTH Peptide methionine sulfoxide reductase MsrA OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=msrA PE=3 SV=1
Length = 169
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILHVNP 63
+CT +G H EV +V FDP V+ Y ++L +FW HDPT + QYRS+I + +
Sbjct: 50 VCTGLTG-HAEVVEVTFDPDVVGYSDLLDVFWSIHDPTTLNRQGPDVGEQYRSVIFYHSD 108
Query: 64 EDKEVAEKS--LAEEKTKHRKPITTLVVPFKRFYDAEEW 100
E + A +S EE + R I T + P FY+AEE+
Sbjct: 109 EQRRAAIESRRRLEESGRFRDRIVTAIEPAGTFYEAEEY 147
>sp|C3KXI0|MSRA_CLOB6 Peptide methionine sulfoxide reductase MsrA OS=Clostridium
botulinum (strain 657 / Type Ba4) GN=msrA PE=3 SV=1
Length = 157
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQMK------TQYRSMILH 60
++ +C+ +G H E + +D S+IS +E+L FW DPTV K TQYR+ I +
Sbjct: 41 YKVVCSGTTG-HAEACYIKYDESIISLEELLNKFWNIIDPTVLNKQGNDRGTQYRTGIFY 99
Query: 61 VNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEWPRR 103
+N +D + +S + E+ ++K I T V P K FY+AEE+ ++
Sbjct: 100 LNEKDLNIITESKSREQKNYKKAIVTEVEPLKCFYEAEEYHQK 142
>sp|Q336R9|MSRA4_ORYSJ Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza
sativa subsp. japonica GN=MSRA4 PE=2 SV=2
Length = 263
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILHVNP 63
+CT + H EV +V +D S + ++L +FW HDPT + TQYRS I + P
Sbjct: 139 VCTGAT-YHNEVVRVHYDVSACKFDDLLDVFWARHDPTTPNRQGNDVGTQYRSGIYYYTP 197
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
E ++ A +SL +++ + I T ++P KRFY AEE+
Sbjct: 198 EQEKAARESLEKQQKLLNRTIVTEILPAKRFYRAEEY 234
>sp|Q9LY14|MSRA3_ARATH Peptide methionine sulfoxide reductase A3 OS=Arabidopsis thaliana
GN=MSRA3 PE=1 SV=1
Length = 202
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTV------QMKTQYRSMILHVNP 63
+C+ +G H+EV +V +D + +Y+ +L +FW HDPT + TQYRS I P
Sbjct: 78 VCSGTTG-HSEVVRVQYDLNDCTYESLLDLFWSRHDPTTLNRQGNDVGTQYRSGIYFYTP 136
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEE 99
E +++A +SL + + + I T ++P K+FY AEE
Sbjct: 137 EQEKLARESLERHQQQMERKIMTEILPAKKFYRAEE 172
>sp|Q9LY15|MSRA2_ARATH Peptide methionine sulfoxide reductase A2 OS=Arabidopsis thaliana
GN=MRSA2 PE=1 SV=1
Length = 218
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 7 HRGICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQ------MKTQYRSMILH 60
+ +CT + +H EV +V +DP +Y+ +L +FW H+PT + QYRS I
Sbjct: 91 YEDVCT-NTTNHAEVVRVQYDPKECTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYF 149
Query: 61 VNPEDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
PE +++A +SL +E+ K I T ++P K+FY AEE+
Sbjct: 150 YTPEQEKLARESLEKEQKKLEDKIVTEILPAKKFYKAEEY 189
>sp|Q746G0|MSRA_THET2 Peptide methionine sulfoxide reductase MsrA OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=msrA PE=3
SV=1
Length = 176
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 10 ICTVYSGDHTEVTQVDFDPSVISYKEILRIFWKHHDPTVQ------MKTQYRSMILHVNP 63
+CT +G H E QV FDP V+ Y ++LR F+ HDPT + + QY I + +
Sbjct: 46 VCTGTTG-HREAVQVRFDPGVLPYADLLRYFFAVHDPTSEDRQGPDVGPQYSPAIFYHSE 104
Query: 64 EDKEVAEKSLAEEKTKHRKPITTLVVPFKRFYDAEEW 100
E K VAE + E + KPI T ++PF FY AE +
Sbjct: 105 EQKRVAEAVMRELAPLYPKPIATKLLPFTTFYPAEAY 141
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,632,949
Number of Sequences: 539616
Number of extensions: 3871367
Number of successful extensions: 10390
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 9803
Number of HSP's gapped (non-prelim): 356
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)