Query psy9123
Match_columns 118
No_of_seqs 105 out of 378
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 19:31:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9123.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9123hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iek_A Ribonuclease TTHA0252; 99.8 1.3E-20 4.6E-25 155.5 9.4 93 22-116 178-278 (431)
2 2i7t_A Cleavage and polyadenyl 99.8 8.9E-19 3E-23 144.2 6.7 94 21-114 195-297 (459)
3 2i7x_A Protein CFT2; polyadeny 99.6 1.2E-15 4.1E-20 134.4 8.1 94 23-116 206-310 (717)
4 3af5_A Putative uncharacterize 99.6 4.5E-15 1.5E-19 128.5 9.7 91 22-114 384-484 (651)
5 2ycb_A Beta-CAsp RNAse, cleava 99.5 1.8E-14 6E-19 124.4 10.0 92 22-114 369-470 (636)
6 2xr1_A Cleavage and polyadenyl 99.5 1.4E-14 4.9E-19 125.3 7.7 90 22-112 372-471 (640)
7 3zq4_A Ribonuclease J 1, RNAse 98.4 7.5E-07 2.6E-11 76.1 8.0 74 22-102 187-269 (555)
8 3bk2_A RNAse J, metal dependen 97.6 0.00011 3.6E-09 62.6 6.8 76 23-107 204-289 (562)
9 3zdk_A 5' exonuclease apollo; 97.0 0.00072 2.5E-08 54.5 5.0 55 20-74 136-198 (336)
10 2az4_A Hypothetical protein EF 96.9 0.0017 5.9E-08 52.2 6.4 54 36-99 236-293 (429)
11 4b87_A DNA cross-LINK repair 1 96.0 0.0053 1.8E-07 49.9 3.9 53 22-74 157-221 (367)
12 3dou_A Ribosomal RNA large sub 91.5 0.24 8.2E-06 35.8 4.5 40 38-77 119-158 (191)
13 2nyu_A Putative ribosomal RNA 91.0 0.24 8.2E-06 34.4 3.9 40 38-77 125-164 (196)
14 1ej0_A FTSJ; methyltransferase 90.1 0.28 9.5E-06 32.6 3.5 56 22-77 87-155 (180)
15 3hm2_A Precorrin-6Y C5,15-meth 89.7 0.35 1.2E-05 32.8 3.9 51 22-74 93-143 (178)
16 1dus_A MJ0882; hypothetical pr 88.7 0.87 3E-05 30.8 5.3 57 21-77 117-176 (194)
17 3e05_A Precorrin-6Y C5,15-meth 88.6 0.82 2.8E-05 32.2 5.2 52 22-74 107-158 (204)
18 1l3i_A Precorrin-6Y methyltran 87.6 0.81 2.8E-05 30.9 4.5 51 23-74 100-150 (192)
19 2plw_A Ribosomal RNA methyltra 86.6 0.5 1.7E-05 33.0 3.1 39 39-77 135-173 (201)
20 3lpm_A Putative methyltransfer 86.3 0.76 2.6E-05 34.0 4.1 37 36-73 154-190 (259)
21 3njr_A Precorrin-6Y methylase; 85.6 1.3 4.3E-05 31.9 4.9 50 22-74 121-170 (204)
22 3ijw_A Aminoglycoside N3-acety 83.9 1.1 3.9E-05 35.4 4.3 37 25-61 34-75 (268)
23 2yxd_A Probable cobalt-precorr 83.9 2.2 7.4E-05 28.6 5.2 49 22-74 99-147 (183)
24 2nyg_A YOKD protein; PFAM02522 83.7 1.2 4.2E-05 35.2 4.4 37 25-61 32-73 (273)
25 3sma_A FRBF; N-acetyl transfer 81.1 1 3.5E-05 36.2 3.1 37 25-61 41-82 (286)
26 3evf_A RNA-directed RNA polyme 80.9 3.6 0.00012 32.8 6.2 70 20-90 137-225 (277)
27 3jrn_A AT1G72930 protein; TIR 80.9 2.1 7.2E-05 31.8 4.6 53 3-59 47-102 (176)
28 2xyq_A Putative 2'-O-methyl tr 79.7 0.75 2.6E-05 36.3 1.8 52 22-74 122-187 (290)
29 2ozv_A Hypothetical protein AT 79.4 1.7 6E-05 32.4 3.7 38 37-75 149-186 (260)
30 3cgg_A SAM-dependent methyltra 79.4 3.9 0.00013 27.5 5.2 37 21-57 105-146 (195)
31 1inl_A Spermidine synthase; be 78.8 2.2 7.7E-05 32.8 4.3 56 21-77 161-228 (296)
32 3eld_A Methyltransferase; flav 77.6 4.2 0.00014 32.9 5.7 75 20-95 144-237 (300)
33 3ozi_A L6TR; plant TIR domain, 76.9 2.1 7.1E-05 32.8 3.5 40 20-59 88-130 (204)
34 2nxc_A L11 mtase, ribosomal pr 76.3 2.9 9.9E-05 31.1 4.1 51 22-73 183-233 (254)
35 1iy9_A Spermidine synthase; ro 74.3 2.5 8.5E-05 32.2 3.4 56 21-77 146-212 (275)
36 2ld4_A Anamorsin; methyltransf 73.3 2 6.7E-05 29.4 2.3 36 21-56 61-99 (176)
37 3grz_A L11 mtase, ribosomal pr 72.2 1.3 4.3E-05 31.1 1.1 51 22-73 124-174 (205)
38 3adn_A Spermidine synthase; am 71.4 5.1 0.00017 31.1 4.6 56 21-77 155-221 (294)
39 2avd_A Catechol-O-methyltransf 71.0 11 0.00037 26.6 5.9 34 22-56 144-177 (229)
40 2i62_A Nicotinamide N-methyltr 71.0 2 6.7E-05 30.9 2.0 37 22-58 156-198 (265)
41 1i9g_A Hypothetical protein RV 70.8 2.8 9.7E-05 30.7 2.8 50 21-73 169-218 (280)
42 3bzb_A Uncharacterized protein 70.7 5 0.00017 30.2 4.3 36 22-57 162-204 (281)
43 1xtp_A LMAJ004091AAA; SGPP, st 70.6 3 0.0001 29.8 2.9 38 21-58 156-197 (254)
44 3gcz_A Polyprotein; flavivirus 70.6 7.5 0.00026 31.1 5.4 69 20-89 153-241 (282)
45 2o97_B NS1, HU-1, DNA-binding 69.6 4.3 0.00015 26.2 3.2 44 9-59 4-47 (90)
46 3bwc_A Spermidine synthase; SA 69.5 7.5 0.00026 29.8 5.1 55 21-76 167-233 (304)
47 1nt2_A Fibrillarin-like PRE-rR 69.2 3.8 0.00013 29.7 3.2 36 22-57 125-160 (210)
48 1mul_A NS2, HU-2, DNA binding 68.9 4.1 0.00014 26.3 3.0 44 9-59 4-47 (90)
49 3evz_A Methyltransferase; NYSG 68.8 5.7 0.00019 28.1 4.0 35 38-73 159-195 (230)
50 3mti_A RRNA methylase; SAM-dep 68.8 6.3 0.00021 26.9 4.1 40 21-60 87-137 (185)
51 3ntv_A MW1564 protein; rossman 68.1 5.5 0.00019 28.8 3.9 34 22-56 141-174 (232)
52 3hnr_A Probable methyltransfer 67.8 5.9 0.0002 27.6 3.9 37 22-58 105-145 (220)
53 2yvl_A TRMI protein, hypotheti 67.4 2.7 9.3E-05 30.0 2.1 49 22-73 157-205 (248)
54 3tfw_A Putative O-methyltransf 67.2 4.7 0.00016 29.6 3.4 36 21-57 134-169 (248)
55 3e23_A Uncharacterized protein 67.1 4.6 0.00016 28.2 3.2 39 20-58 99-141 (211)
56 3r24_A NSP16, 2'-O-methyl tran 66.6 2.7 9.1E-05 34.8 2.1 55 21-77 167-235 (344)
57 2i7c_A Spermidine synthase; tr 66.6 8.5 0.00029 29.2 4.8 56 21-76 149-214 (283)
58 1ri5_A MRNA capping enzyme; me 66.5 6.3 0.00022 28.7 4.0 45 21-65 131-181 (298)
59 2p41_A Type II methyltransfera 66.4 8.9 0.0003 29.8 5.0 67 22-89 147-231 (305)
60 1mjf_A Spermidine synthase; sp 66.3 7.8 0.00027 29.3 4.6 56 21-77 150-216 (281)
61 3ccf_A Cyclopropane-fatty-acyl 66.3 5.1 0.00017 29.5 3.5 38 22-59 116-155 (279)
62 3duw_A OMT, O-methyltransferas 66.1 18 0.00061 25.4 6.2 35 22-57 132-166 (223)
63 2pwy_A TRNA (adenine-N(1)-)-me 66.1 2.7 9.2E-05 30.2 1.8 49 22-73 165-213 (258)
64 2b2c_A Spermidine synthase; be 65.8 9.6 0.00033 29.8 5.1 57 21-78 179-246 (314)
65 1g8a_A Fibrillarin-like PRE-rR 65.6 4.9 0.00017 28.6 3.1 36 22-57 142-177 (227)
66 3tr6_A O-methyltransferase; ce 65.6 5.8 0.0002 28.0 3.5 34 22-56 139-172 (225)
67 2gs9_A Hypothetical protein TT 65.5 4.5 0.00015 28.1 2.9 41 21-61 93-135 (211)
68 3dh0_A SAM dependent methyltra 65.4 5.3 0.00018 27.9 3.2 37 21-57 104-142 (219)
69 3rhi_A DNA-binding protein HU; 65.3 7 0.00024 25.4 3.6 43 10-59 8-50 (93)
70 1p71_A DNA-binding protein HU; 65.2 3.8 0.00013 26.7 2.3 44 9-59 4-47 (94)
71 2xvm_A Tellurite resistance pr 64.8 5.1 0.00018 27.2 3.0 36 21-56 95-134 (199)
72 2p8j_A S-adenosylmethionine-de 64.7 6.1 0.00021 27.3 3.4 41 21-61 87-131 (209)
73 1b8z_A Protein (histonelike pr 64.0 4.2 0.00014 26.2 2.3 26 34-59 22-47 (90)
74 3dli_A Methyltransferase; PSI- 63.4 5 0.00017 28.8 2.8 45 21-65 99-147 (240)
75 3i9f_A Putative type 11 methyl 63.0 5.5 0.00019 26.7 2.9 38 21-58 73-112 (170)
76 2b25_A Hypothetical protein; s 62.9 5.7 0.00019 30.4 3.2 50 22-74 186-235 (336)
77 2pt6_A Spermidine synthase; tr 62.8 10 0.00035 29.5 4.8 56 21-77 187-253 (321)
78 2jvf_A De novo protein M7; tet 62.8 12 0.00042 25.1 4.5 55 33-87 31-85 (96)
79 1yb2_A Hypothetical protein TA 62.6 3.3 0.00011 30.9 1.8 49 22-73 178-226 (275)
80 3id6_C Fibrillarin-like rRNA/T 62.4 5.6 0.00019 30.1 3.1 38 22-59 145-182 (232)
81 3mb5_A SAM-dependent methyltra 62.4 4.9 0.00017 29.0 2.7 50 22-74 161-210 (255)
82 2rhm_A Putative kinase; P-loop 62.2 17 0.0006 24.6 5.4 60 38-99 64-123 (193)
83 1kpg_A CFA synthase;, cyclopro 62.1 7.1 0.00024 28.6 3.5 37 22-58 128-168 (287)
84 2ipx_A RRNA 2'-O-methyltransfe 62.0 6.2 0.00021 28.3 3.1 39 22-60 146-184 (233)
85 3h2b_A SAM-dependent methyltra 61.9 5 0.00017 27.7 2.5 39 21-59 100-142 (203)
86 3sm3_A SAM-dependent methyltra 61.7 7.1 0.00024 27.2 3.3 39 21-59 99-142 (235)
87 2np2_A HBB; protein-DNA comple 61.6 8.4 0.00029 25.8 3.6 45 8-59 11-60 (108)
88 1fbn_A MJ fibrillarin homologu 61.5 6.4 0.00022 28.3 3.1 35 22-56 142-176 (230)
89 3ou2_A SAM-dependent methyltra 61.5 6.9 0.00024 27.0 3.2 41 20-60 104-148 (218)
90 3lcc_A Putative methyl chlorid 61.2 6.6 0.00023 27.9 3.1 39 22-60 131-173 (235)
91 2a14_A Indolethylamine N-methy 61.1 3.8 0.00013 30.3 1.9 37 22-58 155-197 (263)
92 3dtn_A Putative methyltransfer 61.0 6.7 0.00023 27.7 3.1 37 22-58 108-148 (234)
93 1owf_A IHF-alpha, integration 61.0 5.1 0.00017 26.4 2.3 44 9-59 6-49 (99)
94 3e8s_A Putative SAM dependent 60.8 3.5 0.00012 28.6 1.6 41 19-59 112-153 (227)
95 1y8c_A S-adenosylmethionine-de 60.7 5 0.00017 28.2 2.4 39 22-60 100-144 (246)
96 3pfg_A N-methyltransferase; N, 60.5 5.8 0.0002 28.7 2.8 37 21-57 108-150 (263)
97 2pbr_A DTMP kinase, thymidylat 60.5 23 0.00078 23.9 5.8 58 38-95 70-137 (195)
98 2zfu_A Nucleomethylin, cerebra 60.1 13 0.00044 25.9 4.5 37 21-57 113-150 (215)
99 1ws6_A Methyltransferase; stru 60.0 3.9 0.00013 27.2 1.6 40 22-61 109-150 (171)
100 1ve3_A Hypothetical protein PH 59.8 7.5 0.00026 27.1 3.2 39 21-59 101-143 (227)
101 3dlc_A Putative S-adenosyl-L-m 59.7 6.7 0.00023 26.9 2.9 37 21-57 109-147 (219)
102 2ex4_A Adrenal gland protein A 59.4 4.8 0.00017 28.8 2.2 35 22-56 145-183 (241)
103 2pxx_A Uncharacterized protein 59.0 11 0.00036 25.9 3.8 42 22-63 106-164 (215)
104 3ujc_A Phosphoethanolamine N-m 58.9 8 0.00027 27.5 3.2 38 21-58 118-159 (266)
105 3ggd_A SAM-dependent methyltra 58.8 8.9 0.00031 27.3 3.5 40 22-61 123-166 (245)
106 3m70_A Tellurite resistance pr 58.7 7.7 0.00026 28.5 3.2 36 21-56 182-221 (286)
107 3ofk_A Nodulation protein S; N 58.2 7.3 0.00025 27.2 2.9 38 21-58 112-154 (216)
108 3g5l_A Putative S-adenosylmeth 58.0 7.7 0.00026 27.8 3.1 38 21-58 106-145 (253)
109 3bkw_A MLL3908 protein, S-aden 57.9 7.9 0.00027 27.2 3.1 38 21-58 105-144 (243)
110 3d2l_A SAM-dependent methyltra 57.6 6.6 0.00023 27.7 2.6 43 22-64 95-143 (243)
111 3c3y_A Pfomt, O-methyltransfer 57.5 11 0.00037 27.5 3.8 35 21-56 145-179 (237)
112 2g72_A Phenylethanolamine N-me 56.7 5 0.00017 29.7 1.9 35 22-56 173-213 (289)
113 1vlm_A SAM-dependent methyltra 56.5 8.3 0.00028 27.2 3.0 39 21-59 100-140 (219)
114 3i53_A O-methyltransferase; CO 56.3 11 0.00039 28.5 3.9 34 23-56 235-272 (332)
115 2fk8_A Methoxy mycolic acid sy 56.1 11 0.00036 28.3 3.6 37 22-58 154-194 (318)
116 3g07_A 7SK snRNA methylphospha 56.0 7.8 0.00027 29.2 2.9 40 21-60 175-222 (292)
117 1owf_B IHF-beta, integration H 55.9 13 0.00044 24.0 3.6 44 9-59 4-48 (94)
118 3r3h_A O-methyltransferase, SA 55.8 27 0.00094 25.6 5.9 35 21-56 134-168 (242)
119 3c4i_A DNA-binding protein HU 55.7 13 0.00044 24.4 3.6 26 34-59 22-47 (99)
120 3s4e_A Dual specificity protei 55.2 30 0.001 23.1 5.6 38 35-72 65-105 (144)
121 2p7i_A Hypothetical protein; p 55.1 6.8 0.00023 27.4 2.3 39 21-59 101-142 (250)
122 1pjz_A Thiopurine S-methyltran 54.9 11 0.00036 26.8 3.3 32 22-53 100-135 (203)
123 2fca_A TRNA (guanine-N(7)-)-me 54.7 24 0.0008 25.2 5.2 37 38-74 133-169 (213)
124 3cbg_A O-methyltransferase; cy 54.5 27 0.00093 25.1 5.6 34 22-56 147-180 (232)
125 2oxt_A Nucleoside-2'-O-methylt 54.4 21 0.00071 27.1 5.1 80 21-101 138-237 (265)
126 3bxo_A N,N-dimethyltransferase 54.3 9.3 0.00032 26.8 2.9 38 21-58 98-141 (239)
127 3l8d_A Methyltransferase; stru 54.2 8.7 0.0003 27.1 2.8 38 21-58 114-153 (242)
128 1o54_A SAM-dependent O-methylt 53.9 8 0.00027 28.6 2.6 49 22-73 180-228 (277)
129 2ip2_A Probable phenazine-spec 53.6 11 0.00037 28.5 3.4 36 22-57 232-271 (334)
130 4eaq_A DTMP kinase, thymidylat 53.5 6.5 0.00022 29.0 2.1 52 44-95 102-163 (229)
131 1xdz_A Methyltransferase GIDB; 53.2 14 0.00047 26.7 3.7 34 22-57 140-173 (240)
132 1yzh_A TRNA (guanine-N(7)-)-me 53.2 21 0.00073 25.0 4.7 53 22-74 110-172 (214)
133 2px2_A Genome polyprotein [con 52.6 36 0.0012 27.1 6.4 77 21-99 137-233 (269)
134 2gk3_A Putative cytoplasmic pr 52.5 9.9 0.00034 28.8 3.0 36 22-57 76-124 (256)
135 3a27_A TYW2, uncharacterized p 52.5 8.5 0.00029 28.9 2.6 52 21-74 184-240 (272)
136 2yqz_A Hypothetical protein TT 52.2 12 0.0004 26.7 3.2 37 21-57 102-140 (263)
137 3soz_A ORF 245 protein, cytopl 52.0 7.4 0.00025 30.1 2.2 36 22-57 69-117 (248)
138 3ocj_A Putative exported prote 51.9 11 0.00038 28.2 3.2 38 22-59 186-228 (305)
139 2avn_A Ubiquinone/menaquinone 51.8 12 0.0004 27.2 3.2 40 21-61 112-155 (260)
140 3bus_A REBM, methyltransferase 51.4 8 0.00027 28.0 2.2 38 21-58 127-166 (273)
141 3g2m_A PCZA361.24; SAM-depende 51.0 13 0.00044 27.6 3.4 43 21-63 148-195 (299)
142 3dp7_A SAM-dependent methyltra 50.9 13 0.00043 29.0 3.5 35 22-56 247-285 (363)
143 3u81_A Catechol O-methyltransf 50.5 9.8 0.00033 27.0 2.5 51 22-73 133-185 (221)
144 3sxu_A DNA polymerase III subu 50.4 21 0.00072 25.4 4.3 56 35-90 23-88 (150)
145 2o07_A Spermidine synthase; st 50.1 18 0.00061 27.9 4.2 56 21-77 166-232 (304)
146 4df3_A Fibrillarin-like rRNA/T 50.0 12 0.00041 28.4 3.1 36 21-56 145-180 (233)
147 2kw5_A SLR1183 protein; struct 49.9 7.8 0.00027 26.7 1.9 41 22-62 93-135 (202)
148 2aot_A HMT, histamine N-methyl 49.9 9.8 0.00034 28.3 2.6 36 22-57 134-171 (292)
149 3cc8_A Putative methyltransfer 49.8 6.9 0.00024 27.1 1.6 38 21-58 91-130 (230)
150 2hnk_A SAM-dependent O-methylt 49.8 18 0.00062 25.9 3.9 36 22-58 146-181 (239)
151 3rht_A (gatase1)-like protein; 49.7 11 0.00038 29.2 2.9 36 22-57 49-85 (259)
152 1exe_A Transcription factor 1; 49.7 5.6 0.00019 26.3 1.1 27 33-59 21-47 (99)
153 2r3s_A Uncharacterized protein 49.6 13 0.00045 27.8 3.3 34 23-56 232-269 (335)
154 3thr_A Glycine N-methyltransfe 49.5 15 0.00051 26.9 3.5 44 21-64 128-181 (293)
155 3lst_A CALO1 methyltransferase 49.3 12 0.00042 28.7 3.1 34 23-56 247-284 (348)
156 3h16_A TIR protein; bacteria T 49.0 7.2 0.00025 27.2 1.6 54 3-60 58-114 (154)
157 4gek_A TRNA (CMO5U34)-methyltr 48.9 35 0.0012 25.5 5.6 52 22-73 138-196 (261)
158 3hem_A Cyclopropane-fatty-acyl 48.7 14 0.00047 27.5 3.2 40 21-60 135-185 (302)
159 3dxy_A TRNA (guanine-N(7)-)-me 48.7 17 0.00058 26.3 3.7 36 39-74 131-166 (218)
160 3p9n_A Possible methyltransfer 48.3 13 0.00046 25.5 2.9 39 21-59 111-154 (189)
161 3jwg_A HEN1, methyltransferase 48.2 9.4 0.00032 26.7 2.1 35 22-56 101-139 (219)
162 3mcz_A O-methyltransferase; ad 48.0 12 0.0004 28.5 2.8 35 22-56 247-285 (352)
163 3jwh_A HEN1; methyltransferase 47.9 9.5 0.00033 26.7 2.1 35 22-56 101-139 (217)
164 2gb4_A Thiopurine S-methyltran 47.0 14 0.00049 27.5 3.1 36 22-57 151-190 (252)
165 1jg1_A PIMT;, protein-L-isoasp 46.8 5.9 0.0002 28.5 0.9 42 21-66 156-197 (235)
166 4htf_A S-adenosylmethionine-de 46.5 12 0.00042 27.4 2.6 40 21-60 134-175 (285)
167 3mgg_A Methyltransferase; NYSG 46.4 14 0.00048 26.8 2.9 36 21-56 103-140 (276)
168 3hjn_A DTMP kinase, thymidylat 46.4 44 0.0015 23.9 5.6 59 37-95 68-136 (197)
169 1zun_A Sulfate adenylyltransfe 46.2 52 0.0018 25.9 6.4 68 35-104 30-100 (325)
170 4hlc_A DTMP kinase, thymidylat 45.9 36 0.0012 24.7 5.1 58 38-95 72-139 (205)
171 1sui_A Caffeoyl-COA O-methyltr 45.6 16 0.00056 26.9 3.2 34 22-56 155-188 (247)
172 2frn_A Hypothetical protein PH 45.4 8.7 0.0003 28.9 1.6 38 21-60 190-227 (278)
173 2gpy_A O-methyltransferase; st 45.4 9.7 0.00033 27.1 1.8 35 22-57 125-159 (233)
174 2cmg_A Spermidine synthase; tr 45.0 17 0.00058 27.5 3.2 52 22-76 138-193 (262)
175 1xxl_A YCGJ protein; structura 44.9 15 0.00053 26.2 2.9 36 21-56 85-122 (239)
176 1nkv_A Hypothetical protein YJ 44.9 7.1 0.00024 27.9 1.1 36 21-56 101-138 (256)
177 2bm8_A Cephalosporin hydroxyla 44.8 15 0.00052 26.9 2.9 33 23-56 152-185 (236)
178 4f3y_A DHPR, dihydrodipicolina 44.7 49 0.0017 25.5 6.0 33 43-75 114-148 (272)
179 2esr_A Methyltransferase; stru 44.4 13 0.00045 25.0 2.3 41 22-62 99-142 (177)
180 1wzn_A SAM-dependent methyltra 44.3 18 0.00063 25.7 3.2 35 22-56 104-143 (252)
181 1zx0_A Guanidinoacetate N-meth 44.2 14 0.00047 26.5 2.5 39 22-60 127-172 (236)
182 3cgx_A Putative nucleotide-dip 43.5 37 0.0013 25.5 4.9 59 3-62 82-142 (242)
183 2yx1_A Hypothetical protein MJ 43.5 8.1 0.00028 30.1 1.2 50 22-74 257-306 (336)
184 4dzr_A Protein-(glutamine-N5) 43.3 4.9 0.00017 27.5 -0.0 35 38-72 144-178 (215)
185 2p35_A Trans-aconitate 2-methy 43.2 13 0.00044 26.5 2.2 38 21-58 93-132 (259)
186 1jsx_A Glucose-inhibited divis 43.0 8.7 0.0003 26.6 1.2 35 22-58 131-165 (207)
187 3dr5_A Putative O-methyltransf 42.8 19 0.00065 26.2 3.1 34 22-56 128-161 (221)
188 4a6d_A Hydroxyindole O-methylt 42.1 18 0.00062 28.1 3.1 33 24-56 245-281 (353)
189 3fpf_A Mtnas, putative unchara 42.1 18 0.00061 28.7 3.1 40 21-61 186-225 (298)
190 3q7e_A Protein arginine N-meth 41.8 16 0.00055 28.5 2.7 35 21-55 131-170 (349)
191 1uir_A Polyamine aminopropyltr 41.8 13 0.00045 28.6 2.2 54 21-75 149-217 (314)
192 1xj5_A Spermidine synthase 1; 41.7 34 0.0012 26.9 4.7 55 21-76 192-257 (334)
193 2o57_A Putative sarcosine dime 41.6 21 0.00071 26.2 3.2 38 21-58 148-187 (297)
194 1r18_A Protein-L-isoaspartate( 41.4 8.1 0.00028 27.5 0.9 41 22-66 162-202 (227)
195 3g5t_A Trans-aconitate 3-methy 41.2 22 0.00076 26.3 3.3 35 22-56 112-147 (299)
196 2qe6_A Uncharacterized protein 41.1 24 0.00083 26.5 3.6 39 23-61 157-199 (274)
197 1o9g_A RRNA methyltransferase; 40.7 27 0.00093 25.1 3.7 35 22-56 167-212 (250)
198 2vdw_A Vaccinia virus capping 40.4 19 0.00066 27.6 3.0 42 22-63 128-174 (302)
199 3eey_A Putative rRNA methylase 40.2 20 0.00067 24.5 2.7 39 22-60 92-141 (197)
200 2wa2_A Non-structural protein 40.0 39 0.0013 25.8 4.6 87 21-108 146-256 (276)
201 3bgv_A MRNA CAP guanine-N7 met 40.0 23 0.00077 26.5 3.2 41 22-62 113-159 (313)
202 3mtk_A Diguanylate cyclase/pho 39.8 9.7 0.00033 26.0 1.0 58 18-75 82-148 (178)
203 2pbf_A Protein-L-isoaspartate 39.7 5.9 0.0002 28.0 -0.1 35 22-60 161-195 (227)
204 3vc1_A Geranyl diphosphate 2-C 39.2 22 0.00077 26.6 3.1 38 21-58 183-221 (312)
205 3emu_A Leucine rich repeat and 38.7 50 0.0017 22.7 4.7 36 37-72 73-111 (161)
206 1tw3_A COMT, carminomycin 4-O- 38.6 19 0.00066 27.4 2.7 35 23-57 249-287 (360)
207 1qzz_A RDMB, aclacinomycin-10- 38.5 22 0.00075 27.2 3.0 36 23-58 248-287 (374)
208 1t3g_A X-linked interleukin-1 38.4 43 0.0015 23.6 4.3 41 20-60 66-110 (159)
209 1u2z_A Histone-lysine N-methyl 38.1 18 0.00062 30.0 2.6 36 22-57 322-358 (433)
210 1i1n_A Protein-L-isoaspartate 38.1 4.5 0.00015 28.6 -0.9 38 22-63 150-187 (226)
211 2iie_A Integration HOST factor 38.1 19 0.00064 27.0 2.5 44 9-59 50-93 (204)
212 3gwz_A MMCR; methyltransferase 38.0 18 0.00063 28.1 2.5 34 23-56 268-305 (369)
213 2fhp_A Methylase, putative; al 37.7 13 0.00045 24.9 1.5 39 22-60 115-156 (187)
214 1hru_A YRDC gene product; prot 37.3 30 0.001 25.1 3.4 24 38-61 7-30 (188)
215 3f4k_A Putative methyltransfer 37.0 15 0.00052 26.1 1.8 38 21-58 112-150 (257)
216 2vli_A Antibiotic resistance p 36.5 93 0.0032 20.7 6.0 56 38-95 63-119 (183)
217 1af7_A Chemotaxis receptor met 36.5 19 0.00066 27.6 2.4 35 22-56 212-250 (274)
218 1ly1_A Polynucleotide kinase; 36.1 43 0.0015 22.1 3.9 53 40-94 64-119 (181)
219 2j67_A TOLL like receptor 10; 36.0 8.8 0.0003 27.9 0.3 54 3-59 75-131 (178)
220 1vl5_A Unknown conserved prote 36.0 26 0.00088 25.1 2.9 35 22-56 102-138 (260)
221 2fyt_A Protein arginine N-meth 35.5 23 0.0008 27.5 2.8 34 22-55 130-168 (340)
222 1x52_A Pelota homolog, CGI-17; 35.2 42 0.0014 23.1 3.8 38 22-59 53-95 (124)
223 3ezz_A Dual specificity protei 35.1 33 0.0011 22.7 3.2 33 35-67 65-98 (144)
224 3v9p_A DTMP kinase, thymidylat 34.8 62 0.0021 24.0 5.0 56 37-92 98-163 (227)
225 3kkz_A Uncharacterized protein 34.7 23 0.00078 25.6 2.4 38 21-58 112-150 (267)
226 3g89_A Ribosomal RNA small sub 34.6 26 0.0009 25.9 2.8 50 22-73 150-201 (249)
227 1cqm_A Ribosomal protein S6; a 34.5 56 0.0019 21.5 4.2 35 26-60 8-42 (101)
228 1fp2_A Isoflavone O-methyltran 34.3 40 0.0014 25.7 3.9 34 23-56 246-286 (352)
229 2nt2_A Protein phosphatase sli 34.0 99 0.0034 20.4 5.5 36 37-72 67-105 (145)
230 1zg3_A Isoflavanone 4'-O-methy 33.6 36 0.0012 26.1 3.5 34 23-56 251-291 (358)
231 1fp1_D Isoliquiritigenin 2'-O- 33.2 29 0.001 26.8 3.0 33 24-56 268-304 (372)
232 4e5v_A Putative THUA-like prot 33.1 28 0.00096 27.0 2.9 40 21-60 56-95 (281)
233 3q87_B N6 adenine specific DNA 33.1 46 0.0016 22.6 3.7 50 22-73 77-138 (170)
234 3iv6_A Putative Zn-dependent a 32.8 44 0.0015 25.5 3.9 38 22-60 109-150 (261)
235 1m6e_X S-adenosyl-L-methionnin 32.7 26 0.00088 28.4 2.7 62 30-91 181-260 (359)
236 1dih_A Dihydrodipicolinate red 32.6 1.6E+02 0.0055 22.3 7.1 35 42-76 112-148 (273)
237 2j16_A SDP-1, tyrosine-protein 32.4 78 0.0027 22.7 5.0 33 35-67 101-134 (182)
238 3ocj_A Putative exported prote 32.3 47 0.0016 24.7 3.9 44 26-72 9-52 (305)
239 2fpo_A Methylase YHHF; structu 32.1 33 0.0011 24.1 2.9 43 21-63 120-165 (202)
240 3ege_A Putative methyltransfer 32.0 38 0.0013 24.5 3.3 38 21-59 92-131 (261)
241 3s5j_B Ribose-phosphate pyroph 32.0 54 0.0018 26.3 4.4 38 25-63 52-96 (326)
242 2img_A Dual specificity protei 31.9 64 0.0022 20.9 4.2 34 35-68 73-107 (151)
243 4e2x_A TCAB9; kijanose, tetron 31.8 31 0.001 27.0 2.9 37 22-58 170-208 (416)
244 3icl_A EAL/ggdef domain protei 31.6 47 0.0016 21.8 3.5 45 18-62 76-124 (171)
245 2hcm_A Dual specificity protei 31.6 95 0.0033 20.9 5.2 32 36-67 74-106 (164)
246 3lbf_A Protein-L-isoaspartate 31.6 11 0.00037 26.2 0.2 36 21-60 141-176 (210)
247 4erc_A Dual specificity protei 31.5 81 0.0028 20.5 4.6 36 34-69 71-107 (150)
248 1g6q_1 HnRNP arginine N-methyl 30.8 28 0.00097 26.7 2.5 34 22-55 104-142 (328)
249 2kjw_A TS9, 30S ribosomal prot 30.7 41 0.0014 22.5 3.0 29 26-54 50-79 (96)
250 2yxe_A Protein-L-isoaspartate 30.7 16 0.00053 25.5 0.9 36 22-61 145-180 (215)
251 1rr7_A Middle operon regulator 30.7 76 0.0026 21.9 4.5 42 32-79 27-68 (129)
252 2j5a_A 30S ribosomal protein S 30.7 39 0.0013 22.7 2.9 38 25-62 13-50 (110)
253 3dah_A Ribose-phosphate pyroph 30.6 60 0.0021 25.8 4.5 38 25-63 56-100 (319)
254 2igt_A SAM dependent methyltra 30.6 49 0.0017 25.8 3.9 55 22-77 224-293 (332)
255 1wxx_A TT1595, hypothetical pr 30.3 46 0.0016 26.1 3.7 43 21-64 277-331 (382)
256 2r0b_A Serine/threonine/tyrosi 30.2 55 0.0019 21.8 3.7 31 37-67 76-107 (154)
257 2ift_A Putative methylase HI07 30.1 21 0.00073 25.1 1.6 40 22-61 123-166 (201)
258 1dl5_A Protein-L-isoaspartate 29.9 21 0.00072 27.1 1.6 37 22-62 143-179 (317)
259 2esb_A Dual specificity protei 29.8 53 0.0018 23.2 3.7 37 36-72 82-121 (188)
260 2z0h_A DTMP kinase, thymidylat 29.7 50 0.0017 22.3 3.4 52 44-95 75-136 (197)
261 3ckk_A TRNA (guanine-N(7)-)-me 29.5 36 0.0012 24.9 2.8 37 38-74 148-184 (235)
262 4fsd_A Arsenic methyltransfera 29.5 35 0.0012 26.6 2.9 37 21-57 164-202 (383)
263 3gu3_A Methyltransferase; alph 29.5 24 0.00084 26.0 1.9 37 22-58 88-126 (284)
264 3db2_A Putative NADPH-dependen 29.4 1.9E+02 0.0064 22.0 7.3 47 22-72 65-114 (354)
265 4ds1_A Dynein light chain 1, c 28.5 36 0.0012 22.6 2.4 35 18-52 7-41 (97)
266 3r0q_C Probable protein argini 27.8 31 0.0011 27.1 2.3 34 22-55 128-166 (376)
267 3reo_A (ISO)eugenol O-methyltr 27.7 43 0.0015 26.1 3.1 32 25-56 263-298 (368)
268 2hxp_A Dual specificity protei 27.7 60 0.0021 22.0 3.5 31 37-67 71-102 (155)
269 3p9c_A Caffeic acid O-methyltr 27.6 43 0.0015 26.0 3.1 32 25-56 261-296 (364)
270 1m7g_A Adenylylsulfate kinase; 27.5 1.4E+02 0.0049 20.7 5.6 55 39-95 86-146 (211)
271 2g6z_A Dual specificity protei 27.5 1E+02 0.0035 22.6 5.0 37 36-72 68-107 (211)
272 2pjd_A Ribosomal RNA small sub 27.4 24 0.00081 27.2 1.5 39 21-59 259-304 (343)
273 2e0t_A Dual specificity phosph 27.2 79 0.0027 20.9 4.0 31 37-67 70-102 (151)
274 1vbf_A 231AA long hypothetical 27.2 19 0.00066 25.3 0.9 36 22-61 133-168 (231)
275 3o2e_A BOLA-like protein; ssgc 27.0 32 0.0011 23.7 1.9 31 19-49 49-80 (105)
276 1p91_A Ribosomal RNA large sub 26.8 12 0.00042 27.0 -0.2 45 22-71 147-191 (269)
277 4dcm_A Ribosomal RNA large sub 26.8 38 0.0013 26.9 2.7 39 21-59 290-335 (375)
278 1zzw_A Dual specificity protei 26.7 71 0.0024 21.1 3.7 31 37-67 69-100 (149)
279 1k7j_A Protein YCIO, protein T 26.5 43 0.0015 24.7 2.8 22 39-60 15-36 (206)
280 2d30_A Cytidine deaminase; pur 26.2 91 0.0031 22.0 4.4 47 57-110 91-138 (141)
281 3hvw_A Diguanylate-cyclase (DG 26.2 75 0.0026 21.4 3.8 33 17-50 74-106 (176)
282 3giw_A Protein of unknown func 26.1 70 0.0024 25.0 4.0 59 23-81 161-223 (277)
283 3gjy_A Spermidine synthase; AP 26.1 69 0.0024 25.4 4.0 56 21-77 157-222 (317)
284 3hva_A Protein FIMX; ggdef dig 26.0 95 0.0033 20.4 4.3 33 17-50 89-121 (177)
285 1k66_A Phytochrome response re 26.0 1.2E+02 0.0041 18.7 5.4 12 81-92 91-102 (149)
286 1o57_A PUR operon repressor; p 25.6 56 0.0019 25.4 3.4 28 50-77 66-93 (291)
287 3hyw_A Sulfide-quinone reducta 25.5 1.9E+02 0.0065 22.6 6.5 53 38-90 130-187 (430)
288 2pln_A HP1043, response regula 25.4 1.2E+02 0.0043 18.7 7.0 17 17-33 12-28 (137)
289 3gms_A Putative NADPH:quinone 25.3 1.3E+02 0.0045 22.6 5.4 61 20-85 210-301 (340)
290 1yzy_A Hypothetical protein HI 25.2 52 0.0018 26.8 3.2 35 22-61 83-117 (413)
291 3dqq_A Putative tRNA synthase; 25.1 54 0.0018 26.8 3.3 33 30-63 90-123 (421)
292 3cm3_A Late protein H1, dual s 25.0 75 0.0026 21.9 3.7 31 37-67 94-125 (176)
293 3dmg_A Probable ribosomal RNA 25.0 70 0.0024 25.5 3.9 43 22-64 297-346 (381)
294 3f81_A Dual specificity protei 24.8 80 0.0027 21.6 3.8 32 35-66 98-131 (183)
295 2js7_A Myeloid differentiation 24.8 12 0.00041 26.6 -0.6 39 21-59 71-112 (160)
296 4e2x_A TCAB9; kijanose, tetron 24.8 65 0.0022 25.0 3.7 37 22-60 376-412 (416)
297 3lv8_A DTMP kinase, thymidylat 24.7 1.2E+02 0.004 22.6 5.0 60 36-95 100-169 (236)
298 2b3t_A Protein methyltransfera 24.6 82 0.0028 23.0 4.0 21 37-57 217-237 (276)
299 1u9y_A RPPK;, ribose-phosphate 24.5 74 0.0025 24.5 3.9 38 25-63 49-92 (284)
300 2oud_A Dual specificity protei 24.4 78 0.0027 21.9 3.7 32 36-67 72-104 (177)
301 3ign_A Diguanylate cyclase; gg 24.4 97 0.0033 20.4 4.1 33 17-50 84-116 (177)
302 2kz0_A BOLA family protein; BO 24.0 32 0.0011 22.1 1.4 33 19-51 31-64 (76)
303 3c3p_A Methyltransferase; NP_9 23.9 31 0.0011 24.0 1.5 32 24-56 127-158 (210)
304 1jcu_A Conserved protein MTH16 23.7 54 0.0018 24.2 2.8 22 39-60 14-35 (208)
305 3ozf_A Hypoxanthine-guanine-xa 23.7 1.8E+02 0.0061 22.3 5.9 61 24-85 60-127 (250)
306 1wrm_A Dual specificity phosph 23.6 88 0.003 21.3 3.8 31 37-67 69-100 (165)
307 3fhl_A Putative oxidoreductase 23.5 2.4E+02 0.0083 21.5 6.7 47 22-72 64-113 (362)
308 3rgo_A Protein-tyrosine phosph 23.4 98 0.0033 20.3 3.9 32 36-67 74-106 (157)
309 3tty_A Beta-GAL, beta-galactos 23.2 46 0.0016 28.8 2.6 39 21-60 450-488 (675)
310 3eyp_A Putative alpha-L-fucosi 23.1 88 0.003 26.1 4.3 58 32-89 270-337 (469)
311 3zzp_A TS9, ribosomal protein 23.0 65 0.0022 20.5 2.8 28 25-52 49-76 (77)
312 2efj_A 3,7-dimethylxanthine me 22.9 15 0.00051 30.1 -0.4 54 37-90 204-271 (384)
313 2wvv_A Alpha-L-fucosidase; alp 22.8 58 0.002 26.9 3.1 43 34-76 293-341 (450)
314 2wgp_A Dual specificity protei 22.6 1.7E+02 0.0059 20.5 5.3 35 37-71 89-126 (190)
315 1yz4_A DUSP15, dual specificit 22.5 79 0.0027 21.3 3.3 32 36-67 69-101 (160)
316 4tmk_A Protein (thymidylate ki 22.2 2.3E+02 0.0078 20.5 6.8 60 36-95 78-147 (213)
317 2qvg_A Two component response 22.1 1.3E+02 0.0043 18.7 4.1 11 81-91 88-98 (143)
318 3tx2_A Probable 6-phosphogluco 21.9 67 0.0023 24.2 3.1 36 37-73 24-60 (251)
319 2as0_A Hypothetical protein PH 21.7 67 0.0023 25.2 3.2 39 21-60 287-337 (396)
320 3l7v_A Putative uncharacterize 21.7 15 0.0005 29.5 -0.7 44 16-60 22-66 (295)
321 3heb_A Response regulator rece 21.6 1.6E+02 0.0055 18.6 7.4 15 79-93 86-100 (152)
322 4hc4_A Protein arginine N-meth 21.3 53 0.0018 26.6 2.5 38 22-60 148-190 (376)
323 4ef1_A Pheromone COB1/lipoprot 21.2 56 0.0019 25.2 2.6 22 48-69 99-122 (246)
324 4hg2_A Methyltransferase type 21.2 51 0.0017 24.7 2.3 39 21-59 97-136 (257)
325 3s4o_A Protein tyrosine phosph 21.1 1.2E+02 0.0041 19.9 4.0 34 36-69 86-128 (167)
326 3ir1_A Outer membrane lipoprot 20.7 51 0.0017 25.6 2.2 23 48-70 97-121 (245)
327 3mz0_A Inositol 2-dehydrogenas 20.4 2.8E+02 0.0096 20.9 7.2 45 23-71 66-113 (344)
328 1xs3_A Hypothetical protein XC 20.3 42 0.0014 21.7 1.4 29 20-49 30-60 (80)
329 3ajd_A Putative methyltransfer 20.3 95 0.0032 22.9 3.6 25 37-61 190-214 (274)
330 3r3t_A 30S ribosomal protein S 20.2 43 0.0015 22.0 1.5 38 26-63 11-48 (99)
331 4hkt_A Inositol 2-dehydrogenas 20.1 2.7E+02 0.0092 20.8 6.2 45 23-71 63-110 (331)
No 1
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.83 E-value=1.3e-20 Score=155.50 Aligned_cols=93 Identities=18% Similarity=0.212 Sum_probs=83.2
Q ss_pred ceeEEEEccc--------cchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHH
Q psy9123 22 SKIAVLLHSD--------LNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPVAD 93 (118)
Q Consensus 22 ~~~~~~~~~~--------~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~ 93 (118)
.+.|+|++-. -..++.++|.+.|.+++++||+||||+|++||+|||++.|.++|++ +|++|||+|||||.
T Consensus 178 ~~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa~gR~qell~~l~~~~~~--~~~~pi~~~s~~a~ 255 (431)
T 3iek_A 178 PLADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFAVERAQEILYVLYTHGHR--LPRAPIYLDSPMAG 255 (431)
T ss_dssp CCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHGGG--SCCCCEEEECHHHH
T ss_pred CCccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEeccchHHHHHHHHHHHHHHh--ccCCCEEEeChHHH
Confidence 4678888432 1345678999999999999999999999999999999999999988 88999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHhhhh
Q psy9123 94 ISLAYSNILAEWNTKVEVQILSK 116 (118)
Q Consensus 94 ~al~~~~~~~Ewl~~~~~~~L~~ 116 (118)
+++++++.|+|||+++.++.+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~ 278 (431)
T 3iek_A 256 RVLSLYPRLVRYFSEEVQAHFLQ 278 (431)
T ss_dssp HHHHHGGGGGGGSCHHHHHHHHT
T ss_pred HHHHHHHHhHHHHHHHHHHHHhc
Confidence 99999999999999999987764
No 2
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.75 E-value=8.9e-19 Score=144.17 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=58.4
Q ss_pred CceeEEEEcc-c-------cchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcC-CCCCCCEEEeChh
Q psy9123 21 QSKIAVLLHS-D-------LNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNS-SLTQIPMFFISPV 91 (118)
Q Consensus 21 ~~~~~~~~~~-~-------~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~-~Lp~iPIyldSPm 91 (118)
..+.|+|++. + -.+++.++|.+.|.+|+++||+|+||+|++||+|||+++|+++|+++ .++.+|||++|||
T Consensus 195 ~~~~D~Li~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~~~~~~~~~~pi~~~s~~ 274 (459)
T 2i7t_A 195 NIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSL 274 (459)
T ss_dssp SSCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCSSSSHHHHHHHHHHHHHHCGGGTTSCEEEC---
T ss_pred CCCCeEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHHHHHHhcCCCCCccEEEECHH
Confidence 3578999872 1 12345678999999999999999999999999999999999999885 5788999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhh
Q psy9123 92 ADISLAYSNILAEWNTKVEVQIL 114 (118)
Q Consensus 92 A~~al~~~~~~~Ewl~~~~~~~L 114 (118)
|.+++++++.|.+|+++..++.+
T Consensus 275 a~~~~~~~~~~~~~~~~~~~~~~ 297 (459)
T 2i7t_A 275 AKKCMAVYQTYVNAMNDKIRKQI 297 (459)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHHHhHHHHHHh
Confidence 99999999999999999877654
No 3
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.60 E-value=1.2e-15 Score=134.39 Aligned_cols=94 Identities=20% Similarity=0.278 Sum_probs=76.1
Q ss_pred eeEEEEccccc-------hhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHh----hcCCCCCCCEEEeChh
Q psy9123 23 KIAVLLHSDLN-------NITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHL----DNSSLTQIPMFFISPV 91 (118)
Q Consensus 23 ~~~~~~~~~~~-------~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~----~~~~Lp~iPIyldSPm 91 (118)
++|+|+..... .+..++|++.|.+++++||+||||+|++||+|||+++|.++| +++.++++|||++||+
T Consensus 206 ~~D~LI~EsTy~~~~h~~~~~~~~l~~~i~~~l~~~G~VlIp~fa~gR~qell~~l~~~~~~~~~~~~~~~~pI~l~g~~ 285 (717)
T 2i7x_A 206 RPSAIITTLDRFGSSQPFKKRSKIFKDTLKKGLSSDGSVIIPVDMSGKFLDLFTQVHELLFESTKINAHTQVPVLILSYA 285 (717)
T ss_dssp SCSEEEECCSCCCCSSCHHHHHHHHHHHHHHHTSTTCEEEEEECTTTHHHHHHHHHHHHHTTC-------CCCEEEECTT
T ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEeccchHHHHHHHHHHHhhhhhhccccCCCceEEEECHH
Confidence 67888753221 135678999999999999999999999999999999999998 3567889999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhhh
Q psy9123 92 ADISLAYSNILAEWNTKVEVQILSK 116 (118)
Q Consensus 92 A~~al~~~~~~~Ewl~~~~~~~L~~ 116 (118)
+.+++++++.|.+||++..++.+..
T Consensus 286 a~~~~~i~~~~~e~l~~~~~~~~~~ 310 (717)
T 2i7x_A 286 RGRTLTYAKSMLEWLSPSLLKTWEN 310 (717)
T ss_dssp TTHHHHHHHTCGGGSCHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhChHHHHHHhc
Confidence 9999999999999999887655543
No 4
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.58 E-value=4.5e-15 Score=128.54 Aligned_cols=91 Identities=11% Similarity=0.138 Sum_probs=80.1
Q ss_pred ceeEEEEc----------cccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChh
Q psy9123 22 SKIAVLLH----------SDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPV 91 (118)
Q Consensus 22 ~~~~~~~~----------~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPm 91 (118)
.+.|+|++ ..-.....++|.++|.+++++||+||||+|++||+|||++.|.++++++++| +|||+|| |
T Consensus 384 ~~~DvLI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp~favgR~qell~~l~~~~~~~~l~-~~I~~dg-~ 461 (651)
T 3af5_A 384 PRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIE-VPIYLDG-M 461 (651)
T ss_dssp SSCSEEEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHHTTTCCC-SCEEEES-S
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeccCccHHHHHHHHHHHhhhhcCCC-CcEEEec-h
Confidence 46899986 1123445688999999999999999999999999999999999999999998 9999999 9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhh
Q psy9123 92 ADISLAYSNILAEWNTKVEVQIL 114 (118)
Q Consensus 92 A~~al~~~~~~~Ewl~~~~~~~L 114 (118)
+.++++++..|.+|+++..++.+
T Consensus 462 a~~~~~~~~~~~~~l~~~~~~~~ 484 (651)
T 3af5_A 462 IWEATAIHTAYPEYLSRRLREQI 484 (651)
T ss_dssp HHHHHHHHHTCGGGSCHHHHHHT
T ss_pred HHHHHHHHHHhHHhcCHHHHHHH
Confidence 99999999999999999866443
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.54 E-value=1.8e-14 Score=124.36 Aligned_cols=92 Identities=15% Similarity=0.205 Sum_probs=80.4
Q ss_pred ceeEEEEcc-c---------cchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChh
Q psy9123 22 SKIAVLLHS-D---------LNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPV 91 (118)
Q Consensus 22 ~~~~~~~~~-~---------~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPm 91 (118)
.++|+|++- + ......++|.+++.+++++||+||||+|++||+|||++++.++++++++|++|||+|| |
T Consensus 369 ~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa~GR~qell~~l~~~~~~~~~~~~~V~~dg-~ 447 (636)
T 2ycb_A 369 PRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVPVYIDG-M 447 (636)
T ss_dssp SCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCTTTHHHHHHHHHHHHHHTTSSCCCCEEEEH-H
T ss_pred CCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECCCcHHHHHHHHHHHHHHhCCCCCCeEEEeh-H
Confidence 478999851 1 1234567899999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhh
Q psy9123 92 ADISLAYSNILAEWNTKVEVQIL 114 (118)
Q Consensus 92 A~~al~~~~~~~Ewl~~~~~~~L 114 (118)
+.++++++..|.+|+++..++.+
T Consensus 448 ~~~~~~~~~~~~~~l~~~~~~~~ 470 (636)
T 2ycb_A 448 IWEANAIHTARPEYLSKDLRDQI 470 (636)
T ss_dssp HHHHHHHHHHSGGGSCHHHHHHH
T ss_pred HHHHHHHHHHhHHhhCHHHHHHH
Confidence 99999999999999999865433
No 6
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.52 E-value=1.4e-14 Score=125.31 Aligned_cols=90 Identities=9% Similarity=0.155 Sum_probs=72.6
Q ss_pred ceeEEEEc-cc---------cchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChh
Q psy9123 22 SKIAVLLH-SD---------LNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPV 91 (118)
Q Consensus 22 ~~~~~~~~-~~---------~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPm 91 (118)
.+.|+|++ |+ ...++.++|.+.|.+++++||+||||+|++||+||+++.|.++++++++|++|||+|| |
T Consensus 372 ~~~DvLi~EsT~g~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~favGR~qell~~l~~~~~~~~~~~~~V~~dg-~ 450 (640)
T 2xr1_A 372 PRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIERGGIAVIPAFAVGRSQEVMIVLEESIRKGLIPEVPVYLDG-M 450 (640)
T ss_dssp SCCSEEEEECTTCSTTCCCCCHHHHHHHHHHHC--------CEEEECCTTTHHHHHHHHHHHHHHHTSSCCCCEEEES-S
T ss_pred CCCcEEEECCCCCCCccCCCCHHHHHHHHHHHHHHHHhcCCeEEEEecccchHHHHHHHHHHHHHhCCCCCCcEEEEh-H
Confidence 47899987 22 2244678999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHhhhhHHHHH
Q psy9123 92 ADISLAYSNILAEWNTKVEVQ 112 (118)
Q Consensus 92 A~~al~~~~~~~Ewl~~~~~~ 112 (118)
+.++++++..|.+|+++..++
T Consensus 451 a~~~~~~~~~~~~~l~~~~~~ 471 (640)
T 2xr1_A 451 IWEATAIHATHPEYLNNDLRK 471 (640)
T ss_dssp HHHHHHHHHHCGGGSCHHHHH
T ss_pred HHHHHHHHHHhHhhhcHHHHH
Confidence 999999999999999998654
No 7
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=98.39 E-value=7.5e-07 Score=76.14 Aligned_cols=74 Identities=8% Similarity=0.094 Sum_probs=60.6
Q ss_pred ceeEEEEccccc------hhhHHHHHHHHHHHHhc-CCeEEEcCCc--hHHHHHHHHHHHHHhhcCCCCCCCEEEeChhH
Q psy9123 22 SKIAVLLHSDLN------NITCDEKWMRDIKNQNE-SGSVLVPCYP--SGVIYDLFECLSSHLDNSSLTQIPMFFISPVA 92 (118)
Q Consensus 22 ~~~~~~~~~~~~------~~~~~eL~~~I~~Tl~~-GG~VLIPaFa--vGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA 92 (118)
.+.|+|++-.-+ ..+.+++.+.+.+++++ +|+|+||+|+ +||+|++++.+.++ ..|||+++++.
T Consensus 187 ~~~d~Li~esT~~~~~~~~~se~~v~~~i~~~~~~~~grvii~~fasnv~R~q~il~~a~~~-------gr~v~v~grs~ 259 (555)
T 3zq4_A 187 EGVLCLLSDSTNSENPEFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQVIEAAVQN-------GRKVAVFGRSM 259 (555)
T ss_dssp TCEEEEEEECTTTTCCSCCCCHHHHHHHHHHHHHHCCSCEEEECCTTCHHHHHHHHHHHHTT-------TCEEEEESHHH
T ss_pred cCCcEEEecCcccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEChhHHHHHHHHHHHHHHH-------CCEEEEeCHHH
Confidence 357888753322 34578899999999987 9999999999 99999999998765 24799999999
Q ss_pred HHHHHHHHHH
Q psy9123 93 DISLAYSNIL 102 (118)
Q Consensus 93 ~~al~~~~~~ 102 (118)
.+++++++.+
T Consensus 260 ~~~~~~~~~~ 269 (555)
T 3zq4_A 260 ESAIEIGQTL 269 (555)
T ss_dssp HHHHHHHHGG
T ss_pred HHHHHHHHHc
Confidence 9998887766
No 8
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=97.61 E-value=0.00011 Score=62.59 Aligned_cols=76 Identities=11% Similarity=-0.050 Sum_probs=55.2
Q ss_pred eeEEEEccccc------hhhHHHHHHHHHHHHh-cCCeEEEcCCc--hHHHHHHHHHHHHHhhcCCCCCCCEEE-eChhH
Q psy9123 23 KIAVLLHSDLN------NITCDEKWMRDIKNQN-ESGSVLVPCYP--SGVIYDLFECLSSHLDNSSLTQIPMFF-ISPVA 92 (118)
Q Consensus 23 ~~~~~~~~~~~------~~~~~eL~~~I~~Tl~-~GG~VLIPaFa--vGRtqELL~~L~~l~~~~~Lp~iPIyl-dSPmA 92 (118)
+.|+|++-.-. ..+..++.+.+.++++ .+|+|+||+|+ +||+|++++.+.++. .|||+ .++|+
T Consensus 204 ~~d~Li~EsT~~~~~g~~~~e~~v~~~l~~~~~~~~grvii~~fas~~~r~q~il~~a~~~~-------r~V~v~g~s~~ 276 (562)
T 3bk2_A 204 GVLLLIADATNAERPGYTPSEMEIAKELDRVIGRAPGRVFVTTFASHIHRIQSVIWAAEKYG-------RKVAMEGRSML 276 (562)
T ss_dssp CCSEEEEECTTTTCCSCCCCHHHHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHTT-------CEEEEECHHHH
T ss_pred CCCEEEecccCCCCCCCCChHHHHHHHHHHHHHhCCCEEEEEEccccchHHHHHHHHHHHhC-------CEEEEEChHHH
Confidence 46777763221 2345677778888875 68999999999 999999999987652 37887 77776
Q ss_pred HHHHHHHHHHHhhhh
Q psy9123 93 DISLAYSNILAEWNT 107 (118)
Q Consensus 93 ~~al~~~~~~~Ewl~ 107 (118)
+++++++.. +|+.
T Consensus 277 -~~~~~~~~~-g~l~ 289 (562)
T 3bk2_A 277 -KFSRIALEL-GYLK 289 (562)
T ss_dssp -HHHHHHHHT-TSCC
T ss_pred -HHHHHHHhc-Cccc
Confidence 787777643 5654
No 9
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=97.01 E-value=0.00072 Score=54.49 Aligned_cols=55 Identities=13% Similarity=0.001 Sum_probs=37.5
Q ss_pred CCceeEEEEccccchh------hHHHHHHHHHHHHhc--CCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 20 GQSKIAVLLHSDLNNI------TCDEKWMRDIKNQNE--SGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~~------~~~eL~~~I~~Tl~~--GG~VLIPaFavGRtqELL~~L~~l 74 (118)
+..++|+|+.-....+ +.++..+.+.+.+++ ||+|+||+|++||+|++++...++
T Consensus 136 ~~~~vD~Li~DsT~~~~~~~~pse~~v~~~l~~~i~~~~~g~vii~~f~vgR~q~i~~~a~~~ 198 (336)
T 3zdk_A 136 LGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYSLGKESLLEQLALEF 198 (336)
T ss_dssp SCCCCSEEEECCTBCCTTCCCCCHHHHHHHHHHHHHTCTTSEEEEEECSSSCHHHHHHHHHHH
T ss_pred ccCCccEEEEecCCCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHc
Confidence 3567888886333222 334444455555443 789999999999999999988654
No 10
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=96.91 E-value=0.0017 Score=52.19 Aligned_cols=54 Identities=6% Similarity=-0.071 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHhcC-CeEEEcCCc---hHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHHHHHHHH
Q psy9123 36 TCDEKWMRDIKNQNES-GSVLVPCYP---SGVIYDLFECLSSHLDNSSLTQIPMFFISPVADISLAYS 99 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~G-G~VLIPaFa---vGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~~al~~~ 99 (118)
+.+++.+.+.++++++ |+++||.+. ++|+|++ ..+.+ -|||++++++.++++++
T Consensus 236 s~~~~~~~i~~~~~~~~~rlil~h~~~~~~~r~~~~------a~~~g----r~v~~~g~~~~~~~~~~ 293 (429)
T 2az4_A 236 SEEDLVQHLVRLELENPNRQITFNGYPANVERFAKI------IEKSP----RTVVLEANMAALLLEVF 293 (429)
T ss_dssp SHHHHHHHHHHHHHTCSSSCEEEEECTTCHHHHHHH------HHHCS----SEEEEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcEEEEEeccchHHHHHHH------HHHhC----CEEEEEChhHHHHHhhc
Confidence 4678888888888775 559999988 9999999 22333 38999999999997764
No 11
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=95.96 E-value=0.0053 Score=49.86 Aligned_cols=53 Identities=8% Similarity=-0.029 Sum_probs=38.7
Q ss_pred ceeEEEEccccc----------hhhHHHHHHHHHHHHhcCCeE--EEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLN----------NITCDEKWMRDIKNQNESGSV--LVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~----------~~~~~eL~~~I~~Tl~~GG~V--LIPaFavGRtqELL~~L~~l 74 (118)
.++|+|+.-... ++..+++.+.+.++++++|++ ++|+|++||+|++++++.++
T Consensus 157 ~~~D~Li~EsTy~~~~~~~ps~~~~~~~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ia~~~ 221 (367)
T 4b87_A 157 QKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVL 221 (367)
T ss_dssp SCCCEEEECCTTCSTTCCCCCHHHHHHHHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHHHHHHT
T ss_pred CCCCEEEEecccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEccchhHHHHHHHHHHHHh
Confidence 467888764322 223344677788888888875 48999999999999998764
No 12
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=91.47 E-value=0.24 Score=35.79 Aligned_cols=40 Identities=10% Similarity=0.230 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhc
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~ 77 (118)
+...+...+.++.||.+++-.|..+...+++..+.+++.+
T Consensus 119 ~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~~ 158 (191)
T 3dou_A 119 QRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSS 158 (191)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEEE
T ss_pred HHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcCE
Confidence 4555666778999999999999999999999999888765
No 13
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=90.97 E-value=0.24 Score=34.40 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhc
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~ 77 (118)
+++.+.+.+.++.||.+++-.+......+++..+..++..
T Consensus 125 ~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~ 164 (196)
T 2nyu_A 125 LTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQN 164 (196)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEE
T ss_pred HHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcc
Confidence 4667777888999999999999888888999888877654
No 14
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=90.15 E-value=0.28 Score=32.56 Aligned_cols=56 Identities=13% Similarity=0.052 Sum_probs=42.5
Q ss_pred ceeEEEEccccc-------hhhH------HHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhc
Q psy9123 22 SKIAVLLHSDLN-------NITC------DEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 22 ~~~~~~~~~~~~-------~~~~------~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~ 77 (118)
.+||+++..... .+.. .++.+.+.+.++.||.+++-.+..+...+++..+.++|..
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~ 155 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTK 155 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHHEEE
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHhhhh
Confidence 479998873321 1111 5677788889999999999888888889999988887765
No 15
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=89.74 E-value=0.35 Score=32.80 Aligned_cols=51 Identities=8% Similarity=-0.022 Sum_probs=40.9
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++...-... .++.+.+.+.++.||.+++-.+......++...+.++
T Consensus 93 ~~~D~i~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA--PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQF 143 (178)
T ss_dssp SCCSEEEECC-TTC--TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcccH--HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHc
Confidence 57999887765554 6677888889999999999888888888888877765
No 16
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=88.71 E-value=0.87 Score=30.84 Aligned_cols=57 Identities=9% Similarity=0.024 Sum_probs=44.0
Q ss_pred CceeEEEEccccc---hhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLN---NITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~---~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~ 77 (118)
..+||+++..... .+...++.+.+.+.++.||.+++=........++...+.+.+..
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~ 176 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGN 176 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSC
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcc
Confidence 4579999875532 24456778888889999999999888877777888888887643
No 17
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=88.60 E-value=0.82 Score=32.19 Aligned_cols=52 Identities=10% Similarity=0.080 Sum_probs=41.9
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++...-.. ...++.+.+.+.++.||.+++-........++...+.+.
T Consensus 107 ~~~D~i~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 107 PDPDRVFIGGSGG-MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDH 158 (204)
T ss_dssp CCCSEEEESCCTT-CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCc-CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHC
Confidence 4699988776544 456778888999999999999888888888888887754
No 18
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=87.61 E-value=0.81 Score=30.95 Aligned_cols=51 Identities=14% Similarity=0.178 Sum_probs=40.6
Q ss_pred eeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 23 KIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 23 ~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
+||+++....... ..++.+.+.+.++.||.+++-.+......++...+.++
T Consensus 100 ~~D~v~~~~~~~~-~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 100 DIDIAVVGGSGGE-LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDL 150 (192)
T ss_dssp CEEEEEESCCTTC-HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHT
T ss_pred CCCEEEECCchHH-HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHC
Confidence 7999987765443 47778888899999999999888777777777777654
No 19
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=86.64 E-value=0.5 Score=32.95 Aligned_cols=39 Identities=15% Similarity=0.037 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhc
Q psy9123 39 EKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 39 eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~ 77 (118)
++...+.+.++.||.+++-.+......+++..+..++..
T Consensus 135 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~f~~ 173 (201)
T 2plw_A 135 SITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQL 173 (201)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHHHhe
Confidence 356677888999999999888877788888888776644
No 20
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=86.29 E-value=0.76 Score=34.00 Aligned_cols=37 Identities=8% Similarity=0.113 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
..+++.+.+.+.++.||.+++ +++..+..+++..+.+
T Consensus 154 ~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~~l~~ 190 (259)
T 3lpm_A 154 TLEDTIRVAASLLKQGGKANF-VHRPERLLDIIDIMRK 190 (259)
T ss_dssp HHHHHHHHHHHHEEEEEEEEE-EECTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHccCCcEEEE-EEcHHHHHHHHHHHHH
Confidence 356788888899999999999 6777888888888875
No 21
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=85.62 E-value=1.3 Score=31.94 Aligned_cols=50 Identities=6% Similarity=-0.110 Sum_probs=40.4
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++...-. ..+ +.+.+.+.++.||.+++-+...+...+++..+.++
T Consensus 121 ~~~D~v~~~~~~--~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 121 PLPEAVFIGGGG--SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp CCCSEEEECSCC--CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcc--cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 368988865422 234 78888899999999999999999999999988765
No 22
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=83.93 E-value=1.1 Score=35.45 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=30.3
Q ss_pred EEEEccccchh-----hHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 25 AVLLHSDLNNI-----TCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 25 ~~~~~~~~~~~-----~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
-|+|||.+..- -.+.+.+++.+++...|.+++|+|+.
T Consensus 34 ~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~t~ 75 (268)
T 3ijw_A 34 TVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQSS 75 (268)
T ss_dssp EEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECCCG
T ss_pred EEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEecccc
Confidence 47889988443 35788899999999999999999964
No 23
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=83.85 E-value=2.2 Score=28.60 Aligned_cols=49 Identities=4% Similarity=-0.100 Sum_probs=38.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++.... ....++.+.+.+. .||.+++-....+...+++..+.++
T Consensus 99 ~~~D~i~~~~~--~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 99 LEFNKAFIGGT--KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESR 147 (183)
T ss_dssp CCCSEEEECSC--SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCCcEEEECCc--ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHc
Confidence 47999988776 4445666666666 9999999998888888888888764
No 24
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=83.71 E-value=1.2 Score=35.20 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=30.0
Q ss_pred EEEEccccchh-----hHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 25 AVLLHSDLNNI-----TCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 25 ~~~~~~~~~~~-----~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
-|+|||.+..- ..+.+.+++.+++...|++++|+|+.
T Consensus 32 ~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPtft~ 73 (273)
T 2nyg_A 32 TVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQSV 73 (273)
T ss_dssp EEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEECCCT
T ss_pred EEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEecccc
Confidence 47888887543 36788999999999999999999864
No 25
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=81.14 E-value=1 Score=36.18 Aligned_cols=37 Identities=14% Similarity=0.378 Sum_probs=30.3
Q ss_pred EEEEccccchh-----hHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 25 AVLLHSDLNNI-----TCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 25 ~~~~~~~~~~~-----~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
-|+|||.+..- -.+.+.+++.+++...|++++|+|+.
T Consensus 41 ~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t~ 82 (286)
T 3sma_A 41 VLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFSG 82 (286)
T ss_dssp EEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCCT
T ss_pred EEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccCc
Confidence 47888887543 35778999999999999999999864
No 26
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=80.93 E-value=3.6 Score=32.84 Aligned_cols=70 Identities=14% Similarity=0.154 Sum_probs=52.2
Q ss_pred CCceeEEEEccccchh----hHH-----HHHHHHHHHHhcC-CeEEEcCCc--hHHHHHHHHHHHHHhhcCCC-------
Q psy9123 20 GQSKIAVLLHSDLNNI----TCD-----EKWMRDIKNQNES-GSVLVPCYP--SGVIYDLFECLSSHLDNSSL------- 80 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~~----~~~-----eL~~~I~~Tl~~G-G~VLIPaFa--vGRtqELL~~L~~l~~~~~L------- 80 (118)
.+.++|+++. |..+. ..+ +|++.+.+.++.| |+.++=+|. -+-+.+++..|.++|.....
T Consensus 137 ~~~~~DlVls-D~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KPaSR~ 215 (277)
T 3evf_A 137 EPVKCDTLLC-DIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNPLSRN 215 (277)
T ss_dssp CCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCTTSCT
T ss_pred CCCCccEEEe-cCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeCCCCC
Confidence 3568998765 66443 222 3567888999999 999999999 88899999999999987442
Q ss_pred CCCCEEEeCh
Q psy9123 81 TQIPMFFISP 90 (118)
Q Consensus 81 p~iPIyldSP 90 (118)
...=+|+.+-
T Consensus 216 ~S~E~Y~V~~ 225 (277)
T 3evf_A 216 STHEMYYVSG 225 (277)
T ss_dssp TCCCEEEESS
T ss_pred CCCceEEEEe
Confidence 1345788763
No 27
>3jrn_A AT1G72930 protein; TIR domain arabidopsis thaliana, plant protein; 2.00A {Arabidopsis thaliana}
Probab=80.91 E-value=2.1 Score=31.77 Aligned_cols=53 Identities=19% Similarity=0.218 Sum_probs=32.9
Q ss_pred CCCCchhHHHHhhcccCCCceeEEEEccccchhh---HHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 3 QNGDNLDSLIASTASSNGQSKIAVLLHSDLNNIT---CDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
+.|+.+..-| ...-.+|++.|+|.|.--..+ .+||..++. ..+.+|.++||+|
T Consensus 47 ~~G~~i~~~l---~~aIe~Sri~IvV~S~ny~~S~WCl~EL~~i~~-~~~~~~~~ViPIf 102 (176)
T 3jrn_A 47 ENGQRFSPEL---KSPIEVSRFAVVVVSENYAASSWCLDELVTIMD-FEKKGSITVMPIF 102 (176)
T ss_dssp ---------------CCTTEEEEEEEECTTTTTCHHHHHHHHHHHH-HHHTTSCEEEEEE
T ss_pred cCCCchHHHH---HHHHHhCCEEEEEecCCcCCChhHHHHHHHHHh-hhccCCCEEEEEE
Confidence 3455554322 233468999999999877665 678887665 4588999999998
No 28
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=79.67 E-value=0.75 Score=36.27 Aligned_cols=52 Identities=12% Similarity=0.022 Sum_probs=40.6
Q ss_pred ceeEEEEccccc--------------hhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLN--------------NITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~--------------~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++.. .. .+..+++.+.+.+.++.||.+++-.|..++.+++...+.++
T Consensus 122 ~~fD~Vvsn-~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~ 187 (290)
T 2xyq_A 122 NKWDLIISD-MYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHF 187 (290)
T ss_dssp SCEEEEEEC-CCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTE
T ss_pred CcccEEEEc-CCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHc
Confidence 579998852 21 12245777888899999999999999888889998888765
No 29
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=79.43 E-value=1.7 Score=32.43 Aligned_cols=38 Identities=5% Similarity=0.037 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHh
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHL 75 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~ 75 (118)
.+++.+.+.+.++.||.+++ +++..|..+++..+.+.+
T Consensus 149 ~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~~l~~~~ 186 (260)
T 2ozv_A 149 FEDWIRTASAIMVSGGQLSL-ISRPQSVAEIIAACGSRF 186 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEE-EECGGGHHHHHHHHTTTE
T ss_pred HHHHHHHHHHHcCCCCEEEE-EEcHHHHHHHHHHHHhcC
Confidence 67788888899999999987 566678888888886543
No 30
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=79.42 E-value=3.9 Score=27.52 Aligned_cols=37 Identities=3% Similarity=0.124 Sum_probs=28.0
Q ss_pred CceeEEEEcc-ccc----hhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 21 QSKIAVLLHS-DLN----NITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 21 ~~~~~~~~~~-~~~----~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..+||+++.. +.. .+...++.+.+.+.++.||.++|-
T Consensus 105 ~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp CCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 3579999986 432 234567788888999999999983
No 31
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=78.83 E-value=2.2 Score=32.78 Aligned_cols=56 Identities=16% Similarity=0.208 Sum_probs=40.1
Q ss_pred CceeEEEEccccchh--------hHHHHHHHHHHHHhcCCeEEE----cCCchHHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLNNI--------TCDEKWMRDIKNQNESGSVLV----PCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--------~~~eL~~~I~~Tl~~GG~VLI----PaFavGRtqELL~~L~~l~~~ 77 (118)
..+||+++. |.... ...++.+.+.+.++.||.+++ |.+......+++..|.+.+..
T Consensus 161 ~~~fD~Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 228 (296)
T 1inl_A 161 KNEFDVIII-DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPI 228 (296)
T ss_dssp SSCEEEEEE-EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSE
T ss_pred CCCceEEEE-cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCc
Confidence 457999885 44322 126778888999999999999 555567788888888777554
No 32
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=77.59 E-value=4.2 Score=32.89 Aligned_cols=75 Identities=12% Similarity=0.089 Sum_probs=56.3
Q ss_pred CCceeEEEEccccchh----h-----HHHHHHHHHHHHhcC-CeEEEcCCc--hHHHHHHHHHHHHHhhcCCC-------
Q psy9123 20 GQSKIAVLLHSDLNNI----T-----CDEKWMRDIKNQNES-GSVLVPCYP--SGVIYDLFECLSSHLDNSSL------- 80 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~~----~-----~~eL~~~I~~Tl~~G-G~VLIPaFa--vGRtqELL~~L~~l~~~~~L------- 80 (118)
.+.++|+++. |..++ . ..+|++...+.++.| |+.++=.|- -+-+.++++.|.++|....+
T Consensus 144 ~~~~~DlVls-D~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KPaSR~ 222 (300)
T 3eld_A 144 PTEPSDTLLC-DIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVPFSRN 222 (300)
T ss_dssp CCCCCSEEEE-CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCTTSCT
T ss_pred CCCCcCEEee-cCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeCCCCC
Confidence 4568998775 66654 1 235678888899999 999999999 89999999999999987432
Q ss_pred CCCCEEEeChhHHHH
Q psy9123 81 TQIPMFFISPVADIS 95 (118)
Q Consensus 81 p~iPIyldSPmA~~a 95 (118)
.+.=+|+.+--..+.
T Consensus 223 ~S~E~Y~V~~~r~n~ 237 (300)
T 3eld_A 223 STHEMYYISGARNNI 237 (300)
T ss_dssp TCCCEEEESSCCCCH
T ss_pred CChHHeeeccCCCCc
Confidence 236688886444333
No 33
>3ozi_A L6TR; plant TIR domain, plant protein; 2.30A {Linum usitatissimum}
Probab=76.88 E-value=2.1 Score=32.75 Aligned_cols=40 Identities=20% Similarity=0.143 Sum_probs=30.0
Q ss_pred CCceeEEEEccccchhh---HHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 20 GQSKIAVLLHSDLNNIT---CDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~~~---~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
.+|++.|+|.|.--..+ .+||..++...-+.+|.++||+|
T Consensus 88 e~Sri~IvV~S~nYa~S~WCl~EL~~I~e~~~~~~~~~ViPIF 130 (204)
T 3ozi_A 88 DQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIF 130 (204)
T ss_dssp HHCSEEEEEECTTGGGCHHHHHHHHHHHHHHHHCTTSEECCEE
T ss_pred HhCcEeeEEEEcccccCcHHHHHHHHHHHHHHhcCCeeeEEEE
Confidence 36889999988876665 57888776654445789999988
No 34
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=76.32 E-value=2.9 Score=31.07 Aligned_cols=51 Identities=10% Similarity=-0.063 Sum_probs=37.8
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
.+||++++.- ..+...++...+.+.++.||.+++-.+......++...+.+
T Consensus 183 ~~fD~Vv~n~-~~~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~ 233 (254)
T 2nxc_A 183 GPFDLLVANL-YAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAG 233 (254)
T ss_dssp CCEEEEEEEC-CHHHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHH
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHH
Confidence 4799998654 44456778888899999999999966666666666665544
No 35
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=74.34 E-value=2.5 Score=32.17 Aligned_cols=56 Identities=13% Similarity=0.183 Sum_probs=40.7
Q ss_pred CceeEEEEccccchhh-------HHHHHHHHHHHHhcCCeEEE----cCCchHHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLNNIT-------CDEKWMRDIKNQNESGSVLV----PCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~-------~~eL~~~I~~Tl~~GG~VLI----PaFavGRtqELL~~L~~l~~~ 77 (118)
..+||+++. |..... ..++.+.+.+.++.||.+++ |.+...+..+++..|.+.+..
T Consensus 146 ~~~fD~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 212 (275)
T 1iy9_A 146 ENQYDVIMV-DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPI 212 (275)
T ss_dssp CSCEEEEEE-SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSE
T ss_pred CCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCC
Confidence 357999887 544321 26788888999999999999 445566777887777776543
No 36
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=73.33 E-value=2 Score=29.45 Aligned_cols=36 Identities=11% Similarity=0.197 Sum_probs=27.6
Q ss_pred CceeEEEEccccch---hhHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLNN---ITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~~---~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
..+||+++.+.... ...+++.+.+.+.++.||.+++
T Consensus 61 ~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp SSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEE
T ss_pred CCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEE
Confidence 45799999764332 2236788889999999999999
No 37
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=72.20 E-value=1.3 Score=31.14 Aligned_cols=51 Identities=14% Similarity=0.058 Sum_probs=37.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
.+||+++..... ....++.+.+.+.++.||.+++-.+......++...+.+
T Consensus 124 ~~fD~i~~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~ 174 (205)
T 3grz_A 124 GKFDLIVANILA-EILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAE 174 (205)
T ss_dssp SCEEEEEEESCH-HHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHH
T ss_pred CCceEEEECCcH-HHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHH
Confidence 689998876444 335677777888899999999976666666666666554
No 38
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=71.41 E-value=5.1 Score=31.05 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=40.6
Q ss_pred CceeEEEEccccchh---h--H--HHHHHHHHHHHhcCCeEEEc----CCchHHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLNNI---T--C--DEKWMRDIKNQNESGSVLVP----CYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~---~--~--~eL~~~I~~Tl~~GG~VLIP----aFavGRtqELL~~L~~l~~~ 77 (118)
..+|||++. |.... . . .++.+.+.+.++.||.+++- .+......+++..+.+.+..
T Consensus 155 ~~~fDvIi~-D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~ 221 (294)
T 3adn_A 155 SQTFDVIIS-DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSD 221 (294)
T ss_dssp CCCEEEEEE-CC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSE
T ss_pred CCCccEEEE-CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCC
Confidence 457999887 33321 1 1 67888899999999999994 56667788888888877654
No 39
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=71.03 E-value=11 Score=26.58 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=26.1
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++. |.......++.+.+.+.++.||.+++
T Consensus 144 ~~~D~v~~-d~~~~~~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 144 GTFDVAVV-DADKENCSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp TCEEEEEE-CSCSTTHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccEEEE-CCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 57998876 43344456777788899999999999
No 40
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=70.97 E-value=2 Score=30.90 Aligned_cols=37 Identities=8% Similarity=-0.116 Sum_probs=28.9
Q ss_pred ceeEEEEccccch----h--hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNN----I--TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~----~--~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++.+.... . ...++.+.+.+.++.||.+++=.
T Consensus 156 ~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 5799999887665 3 45667777888999999998843
No 41
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=70.79 E-value=2.8 Score=30.74 Aligned_cols=50 Identities=12% Similarity=0.025 Sum_probs=38.1
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
..+||+++. +... ..++.+.+.+.++.||.+++-+.......+++..|.+
T Consensus 169 ~~~~D~v~~-~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~ 218 (280)
T 1i9g_A 169 DGSVDRAVL-DMLA--PWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRA 218 (280)
T ss_dssp TTCEEEEEE-ESSC--GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCceeEEEE-CCcC--HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 347998886 3332 2356677788999999999988888888888888875
No 42
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=70.71 E-value=5 Score=30.22 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=29.0
Q ss_pred ceeEEEEccccchh--hHHHHHHHHHHHHh---c--CCeEEEc
Q psy9123 22 SKIAVLLHSDLNNI--TCDEKWMRDIKNQN---E--SGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~---~--GG~VLIP 57 (118)
.+||+++.+|.... ....+.+.+.+.++ . ||.++|-
T Consensus 162 ~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 162 QRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp SSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 57999999886543 46788899999999 8 9987773
No 43
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=70.61 E-value=3 Score=29.76 Aligned_cols=38 Identities=3% Similarity=-0.062 Sum_probs=29.7
Q ss_pred CceeEEEEccccchh----hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI----TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~----~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++.+..... ...++.+.+.+.++.||.++|-.
T Consensus 156 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 358999998776443 35678888899999999999954
No 44
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=70.55 E-value=7.5 Score=31.11 Aligned_cols=69 Identities=12% Similarity=0.070 Sum_probs=51.9
Q ss_pred CCceeEEEEccccchh----hH-----HHHHHHHHHHHhcC--CeEEEcCCc--hHHHHHHHHHHHHHhhcCCC------
Q psy9123 20 GQSKIAVLLHSDLNNI----TC-----DEKWMRDIKNQNES--GSVLVPCYP--SGVIYDLFECLSSHLDNSSL------ 80 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~~----~~-----~eL~~~I~~Tl~~G--G~VLIPaFa--vGRtqELL~~L~~l~~~~~L------ 80 (118)
.+.|+||+|. |..++ .. -+|++...+.++.| |+.++=+|- -+-+.+++..|.++|.....
T Consensus 153 ~~~~~DvVLS-DmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~KPaSR 231 (282)
T 3gcz_A 153 EVIPGDTLLC-DIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRVPLSR 231 (282)
T ss_dssp CCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCTTSC
T ss_pred CCCCcCEEEe-cCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEcCCCc
Confidence 3468998775 55544 11 24677788899999 999999999 88899999999999986432
Q ss_pred -CCCCEEEeC
Q psy9123 81 -TQIPMFFIS 89 (118)
Q Consensus 81 -p~iPIyldS 89 (118)
.+.=+|+.+
T Consensus 232 ~~S~E~Y~V~ 241 (282)
T 3gcz_A 232 NSTHEMYWVS 241 (282)
T ss_dssp TTCCCEEEET
T ss_pred ccCcceeEEE
Confidence 124477775
No 45
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=69.62 E-value=4.3 Score=26.24 Aligned_cols=44 Identities=20% Similarity=0.162 Sum_probs=31.4
Q ss_pred hHHHHhhcccCCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 9 DSLIASTASSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..||..-+...|-||-| .+..++.|.+.|.+++..|+.|-||=|
T Consensus 4 ~eli~~ia~~~~ls~~~-------~~~~l~~~~~~i~~~L~~g~~V~l~gf 47 (90)
T 2o97_B 4 SQLIDKIAAGADISKAA-------AGRALDAIIASVTESLKEGDDVALVGF 47 (90)
T ss_dssp HHHHHHHHHTTC-CHHH-------HHHHHHHHHHHHHHHHHTTCCEEETTT
T ss_pred HHHHHHHHHHhCCCHHH-------HHHHHHHHHHHHHHHHHCCCeEEECCC
Confidence 34555555445545443 356788999999999999999999976
No 46
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=69.48 E-value=7.5 Score=29.83 Aligned_cols=55 Identities=7% Similarity=0.071 Sum_probs=38.4
Q ss_pred CceeEEEEccccchhh-----H--HHHHHHHHHHHhcCCeEEE----cCCchHHHHHHHHHHHHH-hh
Q psy9123 21 QSKIAVLLHSDLNNIT-----C--DEKWMRDIKNQNESGSVLV----PCYPSGVIYDLFECLSSH-LD 76 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~-----~--~eL~~~I~~Tl~~GG~VLI----PaFavGRtqELL~~L~~l-~~ 76 (118)
..+||+++. |..... . .++.+.+.+.++.||.+++ |.+......++...|.+. +.
T Consensus 167 ~~~fDvIi~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~ 233 (304)
T 3bwc_A 167 DNTYDVVII-DTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFA 233 (304)
T ss_dssp TTCEEEEEE-ECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCS
T ss_pred CCceeEEEE-CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCC
Confidence 457999887 332111 1 5788899999999999999 545556677777777766 54
No 47
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=69.20 E-value=3.8 Score=29.70 Aligned_cols=36 Identities=11% Similarity=0.052 Sum_probs=26.6
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||+++..-...+..+.+.+.+.+.++.||.++|-
T Consensus 125 ~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 125 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 579998865333333445577889999999999986
No 48
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=68.92 E-value=4.1 Score=26.29 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=31.8
Q ss_pred hHHHHhhcccCCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 9 DSLIASTASSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..||..-+...|-||-| ....++.|.+.|.+++..|+.|-||=|
T Consensus 4 ~eli~~ia~~~~ls~~~-------~~~~l~~~~~~i~~~L~~g~~V~l~gf 47 (90)
T 1mul_A 4 TQLIDVIAEKAELSKTQ-------AKAALESTLAAITESLKEGDAVQLVGF 47 (90)
T ss_dssp HHHHHHHHHHTTCCHHH-------HHHHHHHHHHHHHHHHHTTCCEEETTT
T ss_pred HHHHHHHHHHhCCCHHH-------HHHHHHHHHHHHHHHHhCCCeEEEcCC
Confidence 34555555445555543 356788999999999999999999866
No 49
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=68.82 E-value=5.7 Score=28.10 Aligned_cols=35 Identities=14% Similarity=0.049 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhcCCeEEE--cCCchHHHHHHHHHHHH
Q psy9123 38 DEKWMRDIKNQNESGSVLV--PCYPSGVIYDLFECLSS 73 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLI--PaFavGRtqELL~~L~~ 73 (118)
.++.+.+.+.++.||.+++ |..+ .+..++...+.+
T Consensus 159 ~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~l~~ 195 (230)
T 3evz_A 159 VKLLEEAFDHLNPGGKVALYLPDKE-KLLNVIKERGIK 195 (230)
T ss_dssp HHHHHHHGGGEEEEEEEEEEEESCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEecccH-hHHHHHHHHHHH
Confidence 6777788888999999988 5433 455666666554
No 50
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=68.81 E-value=6.3 Score=26.88 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=27.3
Q ss_pred CceeEEEEccc-c----------chhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSD-L----------NNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~-~----------~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
..+||+++..- . ..+...++.+.+.+.++.||.++|-+|+
T Consensus 87 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 35799886541 1 2233445667788899999999998886
No 51
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=68.14 E-value=5.5 Score=28.83 Aligned_cols=34 Identities=9% Similarity=0.061 Sum_probs=26.6
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++. |.......++.+.+.+.++.||.+++
T Consensus 141 ~~fD~V~~-~~~~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 141 KVYDMIFI-DAAKAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp SCEEEEEE-ETTSSSHHHHHHHHGGGEEEEEEEEE
T ss_pred CCccEEEE-cCcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 57998875 44444556778888899999999999
No 52
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=67.77 E-value=5.9 Score=27.65 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=27.8
Q ss_pred ceeEEEEccccchh----hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNNI----TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~~----~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++......- ...++.+.+.+.++.||.++|-.
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 68999988764432 22347888889999999999863
No 53
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=67.37 E-value=2.7 Score=30.00 Aligned_cols=49 Identities=10% Similarity=-0.055 Sum_probs=36.1
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
.+||+++... . + ..++.+.+.+.++.||.+++-........+++..|.+
T Consensus 157 ~~~D~v~~~~-~-~-~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~ 205 (248)
T 2yvl_A 157 GIFHAAFVDV-R-E-PWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIEN 205 (248)
T ss_dssp TCBSEEEECS-S-C-GGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTT
T ss_pred CcccEEEECC-c-C-HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4799988632 2 1 1344566678899999999988888888888877754
No 54
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=67.18 E-value=4.7 Score=29.64 Aligned_cols=36 Identities=3% Similarity=0.019 Sum_probs=27.1
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..+||+++. |........+.+.+.+.++.||.+++-
T Consensus 134 ~~~fD~V~~-d~~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 134 CPAFDLIFI-DADKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CCCCSEEEE-CSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCeEEEEE-CCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 458998875 445555567777888999999988874
No 55
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=67.10 E-value=4.6 Score=28.21 Aligned_cols=39 Identities=3% Similarity=-0.154 Sum_probs=30.0
Q ss_pred CCceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 20 GQSKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
...+||+++.+.... +...++.+.+.+.++.||.++|-.
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 99 AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 356899999876443 345678888889999999999853
No 56
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=66.60 E-value=2.7 Score=34.83 Aligned_cols=55 Identities=15% Similarity=0.015 Sum_probs=41.1
Q ss_pred CceeEEEEccccchhh--------------HHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLNNIT--------------CDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~--------------~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~ 77 (118)
+.|+||++ ||..+.+ ++..++...+.++.||++++=+|--+- .+.++.+.+.++.
T Consensus 167 ~~k~DLVI-SDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg-~~~L~~lrk~F~~ 235 (344)
T 3r24_A 167 ANKWDLII-SDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW-NADLYKLMGHFSW 235 (344)
T ss_dssp SSCEEEEE-ECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC-CHHHHHHHTTEEE
T ss_pred CCCCCEEE-ecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC-HHHHHHHHhhCCe
Confidence 58899765 5544333 566777788899999999999999888 5666666666653
No 57
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=66.55 E-value=8.5 Score=29.23 Aligned_cols=56 Identities=13% Similarity=0.128 Sum_probs=38.0
Q ss_pred CceeEEEEc--cccc--hhhH--HHHHHHHHHHHhcCCeEEEc----CCchHHHHHHHHHHHHHhh
Q psy9123 21 QSKIAVLLH--SDLN--NITC--DEKWMRDIKNQNESGSVLVP----CYPSGVIYDLFECLSSHLD 76 (118)
Q Consensus 21 ~~~~~~~~~--~~~~--~~~~--~eL~~~I~~Tl~~GG~VLIP----aFavGRtqELL~~L~~l~~ 76 (118)
..+||+++. .+.. .... .++.+.+.+.++.||.+++= .+......+++..+.+.+.
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 214 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFK 214 (283)
T ss_dssp CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCS
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCC
Confidence 457999987 2211 1111 68888999999999999985 4445556666666666554
No 58
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=66.48 E-value=6.3 Score=28.68 Aligned_cols=45 Identities=11% Similarity=0.024 Sum_probs=33.0
Q ss_pred CceeEEEEccccc------hhhHHHHHHHHHHHHhcCCeEEEcCCchHHHH
Q psy9123 21 QSKIAVLLHSDLN------NITCDEKWMRDIKNQNESGSVLVPCYPSGVIY 65 (118)
Q Consensus 21 ~~~~~~~~~~~~~------~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtq 65 (118)
..+||+++..... .+...++.+.+.+.++.||.++|-........
T Consensus 131 ~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 181 (298)
T 1ri5_A 131 GKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVIL 181 (298)
T ss_dssp SSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHH
T ss_pred CCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHH
Confidence 4579999877654 33456777888889999999998776654433
No 59
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=66.42 E-value=8.9 Score=29.80 Aligned_cols=67 Identities=12% Similarity=0.128 Sum_probs=42.9
Q ss_pred ceeEEEEccccch-------hhHH--HHHHHHHHHHhcCCeEEEcCCch--HHHHHHHHHHHHHhhcC-------CCCCC
Q psy9123 22 SKIAVLLHSDLNN-------ITCD--EKWMRDIKNQNESGSVLVPCYPS--GVIYDLFECLSSHLDNS-------SLTQI 83 (118)
Q Consensus 22 ~~~~~~~~~~~~~-------~~~~--eL~~~I~~Tl~~GG~VLIPaFav--GRtqELL~~L~~l~~~~-------~Lp~i 83 (118)
.+||+++. |... +... .....+.+.++.||.+++-.|.- +-+.+++..+.+.+... +-...
T Consensus 147 ~~fD~V~s-d~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~~f~~v~~~kP~sR~~s~ 225 (305)
T 2p41_A 147 ERCDTLLC-DIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQRKHGGALVRNPLSRNSTH 225 (305)
T ss_dssp CCCSEEEE-CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCTTSCTTCC
T ss_pred CCCCEEEE-CCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHHcCCEEEecCCCCCccH
Confidence 48998876 3321 1111 34566778899999999977765 56678888888776542 12234
Q ss_pred CEEEeC
Q psy9123 84 PMFFIS 89 (118)
Q Consensus 84 PIyldS 89 (118)
-+|+..
T Consensus 226 E~y~v~ 231 (305)
T 2p41_A 226 EMYWVS 231 (305)
T ss_dssp CEEEET
T ss_pred HHHHHH
Confidence 577765
No 60
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=66.34 E-value=7.8 Score=29.33 Aligned_cols=56 Identities=11% Similarity=0.163 Sum_probs=39.1
Q ss_pred CceeEEEEccccch-----hh--HHHHHHHHHHHHhcCCeEEE----cCCchHHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLNN-----IT--CDEKWMRDIKNQNESGSVLV----PCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~~-----~~--~~eL~~~I~~Tl~~GG~VLI----PaFavGRtqELL~~L~~l~~~ 77 (118)
..+||+++. |... .. ..++.+.+.+.++.||.+++ |.+......++...+.+.+..
T Consensus 150 ~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~ 216 (281)
T 1mjf_A 150 NRGFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDR 216 (281)
T ss_dssp CCCEEEEEE-ECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSE
T ss_pred cCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCc
Confidence 357999885 5442 11 26778888999999999998 545556677777777766543
No 61
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=66.33 E-value=5.1 Score=29.46 Aligned_cols=38 Identities=3% Similarity=0.003 Sum_probs=28.6
Q ss_pred ceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 22 SKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 22 ~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
.+||+++......- ...++.+.+.+.++.||.++|-..
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 47999998776532 245677788899999999998443
No 62
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=66.13 E-value=18 Score=25.37 Aligned_cols=35 Identities=6% Similarity=0.063 Sum_probs=26.3
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||+++. |.......++.+.+.+.++.||.+++-
T Consensus 132 ~~fD~v~~-d~~~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 132 EPFDFIFI-DADKQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp CCCSEEEE-CSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCcCEEEE-cCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence 56998875 444555567778888999999988873
No 63
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=66.05 E-value=2.7 Score=30.22 Aligned_cols=49 Identities=6% Similarity=-0.084 Sum_probs=36.4
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
.+||+++. +... ..++.+.+.+.++.||.+++-........+++..|.+
T Consensus 165 ~~~D~v~~-~~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~ 213 (258)
T 2pwy_A 165 AAYDGVAL-DLME--PWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEA 213 (258)
T ss_dssp TCEEEEEE-ESSC--GGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTT
T ss_pred CCcCEEEE-CCcC--HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 47998886 3322 2356777788999999999988877777777777753
No 64
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=65.77 E-value=9.6 Score=29.79 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=38.3
Q ss_pred CceeEEEEccccch-----hh-H-HHHHHHHHHHHhcCCeEEE----cCCchHHHHHHHHHHHHHhhcC
Q psy9123 21 QSKIAVLLHSDLNN-----IT-C-DEKWMRDIKNQNESGSVLV----PCYPSGVIYDLFECLSSHLDNS 78 (118)
Q Consensus 21 ~~~~~~~~~~~~~~-----~~-~-~eL~~~I~~Tl~~GG~VLI----PaFavGRtqELL~~L~~l~~~~ 78 (118)
..+||+++. |... .. . .++.+.+.+.++.||.+++ |.+....+..+...+.+.+..-
T Consensus 179 ~~~fD~Ii~-d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v 246 (314)
T 2b2c_A 179 KNEFDVIIT-DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAV 246 (314)
T ss_dssp TTCEEEEEE-CCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEE
T ss_pred CCCceEEEE-cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcc
Confidence 357999885 4321 11 1 6788889999999999999 5555566777777777776543
No 65
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=65.61 E-value=4.9 Score=28.55 Aligned_cols=36 Identities=8% Similarity=0.038 Sum_probs=26.8
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||++++.-...+..+.+...+.+.++.||.+++-
T Consensus 142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 379999865443444445578889999999999984
No 66
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=65.58 E-value=5.8 Score=27.97 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=26.8
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++. |.......++.+.+.+.++.||.+++
T Consensus 139 ~~fD~v~~-~~~~~~~~~~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 139 WQYDLIYI-DADKANTDLYYEESLKLLREGGLIAV 172 (225)
T ss_dssp TCEEEEEE-CSCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccEEEE-CCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 68998884 44455566777888899999999998
No 67
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=65.53 E-value=4.5 Score=28.15 Aligned_cols=41 Identities=10% Similarity=0.133 Sum_probs=30.5
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
..+||+++.....+- ...++.+.+.+.++.||.++|-.+..
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 93 GESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp SSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 357999998765432 24677888889999999999866544
No 68
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=65.39 E-value=5.3 Score=27.87 Aligned_cols=37 Identities=0% Similarity=-0.199 Sum_probs=28.7
Q ss_pred CceeEEEEccccchhh--HHHHHHHHHHHHhcCCeEEEc
Q psy9123 21 QSKIAVLLHSDLNNIT--CDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~--~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..+||+++.+...... ..++.+.+.+.++.||.++|-
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEE
Confidence 4579999987665432 467788888999999999984
No 69
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=65.34 E-value=7 Score=25.45 Aligned_cols=43 Identities=12% Similarity=0.058 Sum_probs=31.5
Q ss_pred HHHHhhcccCCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 10 SLIASTASSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
.||...+...|-+|-| .+..++.|.+.|.+++..|+.|-||-|
T Consensus 8 eLi~~ia~~~~lsk~~-------~~~~v~~~~~~i~~~L~~g~~V~l~gf 50 (93)
T 3rhi_A 8 ELIKNVAQNAEISQKE-------ATVVVQTVVESITNTLAAGEKVQLIGF 50 (93)
T ss_dssp HHHHHHHHHHTCCHHH-------HHHHHHHHHHHHHHHHHTTCCEEETTT
T ss_pred HHHHHHHHHhCcCHHH-------HHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 3444444444555543 356789999999999999999999976
No 70
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=65.19 E-value=3.8 Score=26.69 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=30.7
Q ss_pred hHHHHhhcccCCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 9 DSLIASTASSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..||..-+...|-||-| -+..++.|.+.|.+++..|+.|-||=|
T Consensus 4 ~eli~~ia~~~~ls~~~-------~~~~l~~~~~~i~~~L~~g~~V~l~gf 47 (94)
T 1p71_A 4 GELVDAVAEKASVTKKQ-------ADAVLTAALETIIEAVSSGDKVTLVGF 47 (94)
T ss_dssp HHHHHHHHHHHTCCHHH-------HHHHHHHHHHHHHHHHHTTCCEEETTT
T ss_pred HHHHHHHHHHhCCCHHH-------HHHHHHHHHHHHHHHHhCCCeEEecCC
Confidence 34444444444444433 356788999999999999999999865
No 71
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=64.85 E-value=5.1 Score=27.24 Aligned_cols=36 Identities=11% Similarity=0.047 Sum_probs=27.8
Q ss_pred CceeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
..+||+++.+... .+...++.+.+.+.++.||.++|
T Consensus 95 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4579999877543 33567788889999999999776
No 72
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=64.69 E-value=6.1 Score=27.25 Aligned_cols=41 Identities=5% Similarity=-0.016 Sum_probs=30.6
Q ss_pred CceeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 21 QSKIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 21 ~~~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
..+||+++..... .+...++.+.+.+.++.||.++|-.+..
T Consensus 87 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 87 DESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp TTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 3579999876532 2445677888899999999999976653
No 73
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=64.01 E-value=4.2 Score=26.17 Aligned_cols=26 Identities=8% Similarity=0.038 Sum_probs=23.2
Q ss_pred hhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 34 NITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 34 ~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
...++.|.+.|.+++..|++|-||=|
T Consensus 22 ~~~l~~~~~~i~~~L~~g~~V~l~gf 47 (90)
T 1b8z_A 22 KLILDTILETITEALAKGEKVQIVGF 47 (90)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEETTT
T ss_pred HHHHHHHHHHHHHHHhCCCEEEECCC
Confidence 46688999999999999999999976
No 74
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=63.38 E-value=5 Score=28.77 Aligned_cols=45 Identities=9% Similarity=-0.002 Sum_probs=33.1
Q ss_pred CceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEEcCCchHHHH
Q psy9123 21 QSKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLVPCYPSGVIY 65 (118)
Q Consensus 21 ~~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtq 65 (118)
..+||+++.....+ ....++.+.+.+.++.||.++|-........
T Consensus 99 ~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 147 (240)
T 3dli_A 99 DKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLY 147 (240)
T ss_dssp TTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHH
T ss_pred CCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhH
Confidence 46799998876543 2457888889999999999999665544433
No 75
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=62.97 E-value=5.5 Score=26.69 Aligned_cols=38 Identities=8% Similarity=0.074 Sum_probs=29.3
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++....... ..+++.+.+.+.++.||.++|-.
T Consensus 73 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 73 DNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp TTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEE
Confidence 458999998775543 24677888889999999999854
No 76
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=62.89 E-value=5.7 Score=30.43 Aligned_cols=50 Identities=8% Similarity=0.008 Sum_probs=36.3
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++.. .... ..+.+.+.+.++.||.++++.....-+++++..+.+.
T Consensus 186 ~~fD~V~~~-~~~~--~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 235 (336)
T 2b25_A 186 LTFDAVALD-MLNP--HVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTC 235 (336)
T ss_dssp --EEEEEEC-SSST--TTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCeeEEEEC-CCCH--HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhc
Confidence 369988763 3221 2256677788999999999998888888888887754
No 77
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=62.83 E-value=10 Score=29.53 Aligned_cols=56 Identities=11% Similarity=0.134 Sum_probs=39.3
Q ss_pred CceeEEEEccccc-----hhh-H-HHHHHHHHHHHhcCCeEEE----cCCchHHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLN-----NIT-C-DEKWMRDIKNQNESGSVLV----PCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~-----~~~-~-~eL~~~I~~Tl~~GG~VLI----PaFavGRtqELL~~L~~l~~~ 77 (118)
..+||+++. |.. ... . .++.+.+.+.++.||.+++ |.+......+++..+.+.+..
T Consensus 187 ~~~fDvIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 253 (321)
T 2pt6_A 187 TNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKK 253 (321)
T ss_dssp CSCEEEEEE-ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSE
T ss_pred CCCceEEEE-CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCC
Confidence 357999885 331 111 1 6788889999999999999 555556777777777766543
No 78
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=62.83 E-value=12 Score=25.07 Aligned_cols=55 Identities=9% Similarity=0.014 Sum_probs=41.3
Q ss_pred chhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCCCCCEEE
Q psy9123 33 NNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSSLTQIPMFF 87 (118)
Q Consensus 33 ~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp~iPIyl 87 (118)
.+++.++|...+.++=.++=.+-|.+---+.+-||++++.+++..-+..++.|-+
T Consensus 31 leralqelekalaragarnvqitisaendeqakelleliarllqklgykdinvrv 85 (96)
T 2jvf_A 31 LERALQELEKALARAGARNVQITISAENDEQAKELLELIARLLQKLGYKDINVRV 85 (96)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHhccccceEEEEEecChHHHHHHHHHHHHHHHHhCCCceEEEE
Confidence 4667778887777776666666777777888999999999998876655555544
No 79
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=62.59 E-value=3.3 Score=30.87 Aligned_cols=49 Identities=6% Similarity=-0.125 Sum_probs=36.0
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
.+||+++. +.+.. .++.+.+.+.++.||.+++-+.......++...|.+
T Consensus 178 ~~fD~Vi~-~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~ 226 (275)
T 1yb2_A 178 QMYDAVIA-DIPDP--WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSA 226 (275)
T ss_dssp CCEEEEEE-CCSCG--GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGG
T ss_pred CCccEEEE-cCcCH--HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 57999887 44322 466777888999999999987777666776666654
No 80
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=62.44 E-value=5.6 Score=30.07 Aligned_cols=38 Identities=13% Similarity=-0.006 Sum_probs=27.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
.+||++++.--..+..+.|...+.+.++.||.++|.+.
T Consensus 145 ~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 145 ENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 48999876544444445566677779999999998643
No 81
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=62.43 E-value=4.9 Score=28.99 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=37.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++. |.... .++.+.+.+.++.||.+++=........++...|.+.
T Consensus 161 ~~~D~v~~-~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 161 ENVDHVIL-DLPQP--ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREF 210 (255)
T ss_dssp CSEEEEEE-CSSCG--GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred CCcCEEEE-CCCCH--HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 46999886 44322 4566777889999999999777777788887777654
No 82
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=62.17 E-value=17 Score=24.58 Aligned_cols=60 Identities=7% Similarity=-0.124 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHHHHHHHH
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPVADISLAYS 99 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~~al~~~ 99 (118)
+.+.+.+...++.|+.|++-.+... ..-+..+.++...+..|.+-||++.|...-.-.+.
T Consensus 64 ~~~~~~~~~~l~~g~~vi~d~~~~~--~~~~~~~~~l~~~~~~~~~~v~l~~~~e~~~~R~~ 123 (193)
T 2rhm_A 64 MMLYHTAATILQSGQSLIMESNFRV--DLDTERMQNLHTIAPFTPIQIRCVASGDVLVERIL 123 (193)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCH--HHHHHHHHHHHHHSCCEEEEEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEecCCCC--HHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHHH
Confidence 3444556667888988888766522 11112223334444455677899988766553333
No 83
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=62.06 E-value=7.1 Score=28.64 Aligned_cols=37 Identities=8% Similarity=0.041 Sum_probs=28.6
Q ss_pred ceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++.....+ +...++.+.+.+.++.||.++|=.
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 5799998776543 335677888899999999999843
No 84
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=62.03 E-value=6.2 Score=28.27 Aligned_cols=39 Identities=5% Similarity=0.003 Sum_probs=28.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.+||+++..-...+....+...+.+.++.||.++|-+++
T Consensus 146 ~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 146 AMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 479998864333344455677788899999999995544
No 85
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=61.85 E-value=5 Score=27.73 Aligned_cols=39 Identities=13% Similarity=0.068 Sum_probs=29.8
Q ss_pred CceeEEEEcccc----chhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDL----NNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..+||+++.... ..+...++.+.+.+.++.||.++|-.+
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 100 PKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp CCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 358999988664 223457788888999999999998654
No 86
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=61.71 E-value=7.1 Score=27.19 Aligned_cols=39 Identities=3% Similarity=-0.044 Sum_probs=29.3
Q ss_pred CceeEEEEccccch-----hhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDLNN-----ITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~~~-----~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..+||+++.+.... +...++.+.+.+.++.||.++|-.+
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 46799998776543 2233788888999999999998654
No 87
>2np2_A HBB; protein-DNA complex, DNA-binding protein, DNA-bending protein, dnabii family, HU/IHF family, DNA binding protein/DNA complex; 3.02A {Borrelia burgdorferi}
Probab=61.58 E-value=8.4 Score=25.80 Aligned_cols=45 Identities=9% Similarity=0.031 Sum_probs=32.7
Q ss_pred hhHHHHhhc-----ccCCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 8 LDSLIASTA-----SSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 8 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
-..||..-+ ...|-+|-| .+..++.|.+.|.++|..|+.|-||=|
T Consensus 11 k~eLi~~ia~~~~~~~~~lsk~~-------~~~vl~~~~~~i~~~L~~G~~V~l~gf 60 (108)
T 2np2_A 11 KSDIVDQIALNIKNNNLKLEKKY-------IRLVIDAFFEELKSNLCSNNVIEFRSF 60 (108)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHH-------HHHHHHHHHHHHHHHHHTTCEEEETTT
T ss_pred HHHHHHHHHhhhhhhhcCCCHHH-------HHHHHHHHHHHHHHHHHCCCeEEecCc
Confidence 345555555 444545543 356788999999999999999999976
No 88
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=61.51 E-value=6.4 Score=28.30 Aligned_cols=35 Identities=9% Similarity=0.010 Sum_probs=26.1
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||++++.-......+.+.+.+.+.++.||.++|
T Consensus 142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEE
Confidence 57999985422233346667888899999999999
No 89
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=61.45 E-value=6.9 Score=26.99 Aligned_cols=41 Identities=7% Similarity=-0.003 Sum_probs=30.2
Q ss_pred CCceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 20 GQSKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
...+||+++.+.... ....++.+.+.+.++.||.++|-.+.
T Consensus 104 ~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 104 PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 346899999876432 22467888888999999999886543
No 90
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=61.20 E-value=6.6 Score=27.92 Aligned_cols=39 Identities=8% Similarity=0.048 Sum_probs=29.9
Q ss_pred ceeEEEEcccc----chhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLHSDL----NNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.+||+++.... ..+...++.+.+.+.++.||.+++=.++
T Consensus 131 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 38999986654 3445678888999999999999984443
No 91
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=61.06 E-value=3.8 Score=30.30 Aligned_cols=37 Identities=5% Similarity=-0.088 Sum_probs=28.1
Q ss_pred ceeEEEEccccch------hhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNN------ITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~------~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++.+-... +...+++..|.+.|+.||.+++-.
T Consensus 155 ~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 155 PLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4899999875443 234567777889999999999863
No 92
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=61.01 E-value=6.7 Score=27.71 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=28.0
Q ss_pred ceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++...... ....++.+.+.+.++.||.++|-.
T Consensus 108 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 108 EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6899998876433 233458888899999999999843
No 93
>1owf_A IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ihf_A 1ouz_A 1owg_A 2ht0_A
Probab=60.96 E-value=5.1 Score=26.38 Aligned_cols=44 Identities=9% Similarity=-0.008 Sum_probs=31.1
Q ss_pred hHHHHhhcccCCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 9 DSLIASTASSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..||..-+...|-||-| -...++.|.+.|.+++..|+.|-||=|
T Consensus 6 ~eli~~ia~~~~ls~~~-------~~~vl~~~~~~i~~~L~~G~~V~l~gf 49 (99)
T 1owf_A 6 AEMSEYLFDKLGLSKRD-------AKELVELFFEEIRRALENGEQVKLSGF 49 (99)
T ss_dssp HHHHHHHHHHHCCCHHH-------HHHHHHHHHHHHHHHHHTTCCEEETTT
T ss_pred HHHHHHHHHHhCCCHHH-------HHHHHHHHHHHHHHHHhCCCeEEecCC
Confidence 34444444444444433 356688999999999999999999865
No 94
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=60.82 E-value=3.5 Score=28.56 Aligned_cols=41 Identities=5% Similarity=-0.164 Sum_probs=29.7
Q ss_pred CCCceeEEEEccccch-hhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 19 NGQSKIAVLLHSDLNN-ITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 19 ~~~~~~~~~~~~~~~~-~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..+++||+++.+.... ....++.+.+.+.++.||.++|-.+
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 112 PVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 3456799998765433 2235677788899999999999543
No 95
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=60.72 E-value=5 Score=28.21 Aligned_cols=39 Identities=10% Similarity=0.055 Sum_probs=28.9
Q ss_pred ceeEEEEccc-cch-----hhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLHSD-LNN-----ITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~~~-~~~-----~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.+||+++... ... +...++.+.+.+.++.||.+++=+..
T Consensus 100 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 100 RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 5799999875 322 34567778888899999999984443
No 96
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=60.51 E-value=5.8 Score=28.74 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=28.2
Q ss_pred CceeEEEEccc-----cc-hhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 21 QSKIAVLLHSD-----LN-NITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 21 ~~~~~~~~~~~-----~~-~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..+||+++... +. .+...++.+.+.+.++.||.++|=
T Consensus 108 ~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 108 GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 46899999874 32 134567788888999999999994
No 97
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=60.51 E-value=23 Score=23.86 Aligned_cols=58 Identities=12% Similarity=0.084 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCch--------HHH--HHHHHHHHHHhhcCCCCCCCEEEeChhHHHH
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYPS--------GVI--YDLFECLSSHLDNSSLTQIPMFFISPVADIS 95 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFav--------GRt--qELL~~L~~l~~~~~Lp~iPIyldSPmA~~a 95 (118)
+.+.+.+...+++|..|++..+.. +|. .+.+..+..+...+..|+.=||++.|.....
T Consensus 70 ~~l~~~i~~~l~~~~~vi~dr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~l~~~~e~~~ 137 (195)
T 2pbr_A 70 KLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATRGVKPDITLLLDIPVDIAL 137 (195)
T ss_dssp HHHHHTHHHHHHTTCEEEEESCHHHHHHHHTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECcchhHHHHHccccCCCCHHHHHHHHHHhhcCCCCCEEEEEeCCHHHHH
Confidence 445566777788898999885431 122 2245555544444445778899999976554
No 98
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=60.09 E-value=13 Score=25.92 Aligned_cols=37 Identities=8% Similarity=-0.027 Sum_probs=27.4
Q ss_pred CceeEEEEccccch-hhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 21 QSKIAVLLHSDLNN-ITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 21 ~~~~~~~~~~~~~~-~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..+||+++.+.... ....++.+.+.+.++.||.++|-
T Consensus 113 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~ 150 (215)
T 2zfu_A 113 DESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVA 150 (215)
T ss_dssp TTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEE
Confidence 35799988765432 33467777888999999999994
No 99
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=60.01 E-value=3.9 Score=27.18 Aligned_cols=40 Identities=5% Similarity=-0.000 Sum_probs=24.5
Q ss_pred ceeEEEEccccchhhHHHHHHHHH--HHHhcCCeEEEcCCch
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDI--KNQNESGSVLVPCYPS 61 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~--~Tl~~GG~VLIPaFav 61 (118)
.+||+++.........+++.+.+. +.++.||.+++-+.+.
T Consensus 109 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 109 ERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 479998876322112223333344 7799999999866554
No 100
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=59.80 E-value=7.5 Score=27.07 Aligned_cols=39 Identities=8% Similarity=0.101 Sum_probs=28.5
Q ss_pred CceeEEEEcccc--ch--hhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDL--NN--ITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~--~~--~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..+||+++..+. .. ....++.+.+.+.++.||.++|=.+
T Consensus 101 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 357999887765 22 2346778888899999999987543
No 101
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=59.67 E-value=6.7 Score=26.90 Aligned_cols=37 Identities=3% Similarity=-0.002 Sum_probs=28.0
Q ss_pred CceeEEEEccccch--hhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 21 QSKIAVLLHSDLNN--ITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 21 ~~~~~~~~~~~~~~--~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..+||+++...... ....++.+.+.+.++.||.++|-
T Consensus 109 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEE
Confidence 45899998876443 23456778888999999999984
No 102
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=59.37 E-value=4.8 Score=28.85 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=27.5
Q ss_pred ceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++...... ....++.+.+.+.++.||.++|
T Consensus 145 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 145 DSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4799998876533 2345788888999999999999
No 103
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=58.95 E-value=11 Score=25.89 Aligned_cols=42 Identities=12% Similarity=0.016 Sum_probs=30.3
Q ss_pred ceeEEEEccccc-----------------hhhHHHHHHHHHHHHhcCCeEEEcCCchHH
Q psy9123 22 SKIAVLLHSDLN-----------------NITCDEKWMRDIKNQNESGSVLVPCYPSGV 63 (118)
Q Consensus 22 ~~~~~~~~~~~~-----------------~~~~~eL~~~I~~Tl~~GG~VLIPaFavGR 63 (118)
.+||+++..... .+...++.+.+.+.++.||.+++=.+....
T Consensus 106 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~ 164 (215)
T 2pxx_A 106 ASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH 164 (215)
T ss_dssp SCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH
T ss_pred CcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH
Confidence 479999864332 233467778888899999999997776543
No 104
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=58.91 E-value=8 Score=27.55 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=29.4
Q ss_pred CceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++...... ....++.+.+.+.++.||.++|-.
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 45799999876543 345677888889999999999854
No 105
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=58.83 E-value=8.9 Score=27.32 Aligned_cols=40 Identities=5% Similarity=-0.253 Sum_probs=28.0
Q ss_pred ceeEEEEcccc----chhhHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 22 SKIAVLLHSDL----NNITCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 22 ~~~~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
+.||+++.... ..+...++.+.+.+.++.||.++|-.+..
T Consensus 123 ~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 123 IGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp HCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred cCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 34777766543 33345788888999999999987755543
No 106
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=58.66 E-value=7.7 Score=28.51 Aligned_cols=36 Identities=11% Similarity=0.054 Sum_probs=28.8
Q ss_pred CceeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
..+||+++..... .....++.+.+.+.++.||.++|
T Consensus 182 ~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 182 QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5679999987653 35567888899999999999777
No 107
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=58.16 E-value=7.3 Score=27.15 Aligned_cols=38 Identities=5% Similarity=0.047 Sum_probs=28.6
Q ss_pred CceeEEEEccccch-----hhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNN-----ITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~-----~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++...... +...++.+.+.+.++.||.++|-+
T Consensus 112 ~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 112 AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 46799999875442 334567888888999999999844
No 108
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=57.99 E-value=7.7 Score=27.80 Aligned_cols=38 Identities=21% Similarity=0.183 Sum_probs=29.7
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++.+..... ...++.+.+.+.++.||.++|-+
T Consensus 106 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 106 PDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 468999998875543 24677888899999999999853
No 109
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=57.93 E-value=7.9 Score=27.24 Aligned_cols=38 Identities=8% Similarity=0.022 Sum_probs=28.8
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++.+..... ...++.+.+.+.++.||.++|-.
T Consensus 105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 457999988765432 24677788889999999999844
No 110
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=57.63 E-value=6.6 Score=27.67 Aligned_cols=43 Identities=5% Similarity=0.046 Sum_probs=30.3
Q ss_pred ceeEEEEccc-c-----chhhHHHHHHHHHHHHhcCCeEEEcCCchHHH
Q psy9123 22 SKIAVLLHSD-L-----NNITCDEKWMRDIKNQNESGSVLVPCYPSGVI 64 (118)
Q Consensus 22 ~~~~~~~~~~-~-----~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRt 64 (118)
.+||+++... . ..+...++.+.+.+.++.||.+++-+....+.
T Consensus 95 ~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 143 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKM 143 (243)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHH
Confidence 5799988642 1 22445677788888999999999865554443
No 111
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=57.49 E-value=11 Score=27.52 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=26.5
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
..+||+++.. -......++.+.+.+.++.||.+++
T Consensus 145 ~~~fD~I~~d-~~~~~~~~~l~~~~~~L~pGG~lv~ 179 (237)
T 3c3y_A 145 EGSYDFGFVD-ADKPNYIKYHERLMKLVKVGGIVAY 179 (237)
T ss_dssp TTCEEEEEEC-SCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCcCEEEEC-CchHHHHHHHHHHHHhcCCCeEEEE
Confidence 3579988753 4444456777788889999999988
No 112
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=56.71 E-value=5 Score=29.75 Aligned_cols=35 Identities=9% Similarity=-0.017 Sum_probs=27.5
Q ss_pred ceeEEEEccccchh------hHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNI------TCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~------~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++.+....- ...++...+.+.++.||.++|
T Consensus 173 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 173 LPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp SSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 45999998876543 356677788889999999998
No 113
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=56.49 E-value=8.3 Score=27.22 Aligned_cols=39 Identities=8% Similarity=0.037 Sum_probs=29.3
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..+||+++....... ...++.+.+.+.++.||.++|-.+
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 100 DESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 457999998765432 246777888899999999998543
No 114
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=56.30 E-value=11 Score=28.48 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=27.7
Q ss_pred eeEEEEcccc----chhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 23 KIAVLLHSDL----NNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 23 ~~~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
+||+.+.+.. .++...++.+.+.+.++.||.++|
T Consensus 235 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 272 (332)
T 3i53_A 235 GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLV 272 (332)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 7999887654 344567888899999999999998
No 115
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=56.09 E-value=11 Score=28.28 Aligned_cols=37 Identities=11% Similarity=0.137 Sum_probs=28.3
Q ss_pred ceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++.....+ +...++.+.+.+.++.||.++|-.
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4799998775432 345777888899999999999843
No 116
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=56.03 E-value=7.8 Score=29.17 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=30.8
Q ss_pred CceeEEEEccccc--------hhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSDLN--------NITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~~~--------~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
..+||+++..... .+...++.+.+.+.++.||.++|-..+
T Consensus 175 ~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 175 TPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 4689999987753 335677888888999999999995443
No 117
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=55.93 E-value=13 Score=24.00 Aligned_cols=44 Identities=11% Similarity=0.094 Sum_probs=31.7
Q ss_pred hHHHHhhcccC-CCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 9 DSLIASTASSN-GQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 9 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..||..-|..+ |-||-|| +..++.|.+.|.+++..|+.|-||=|
T Consensus 4 ~eli~~ia~~~~~ls~~~~-------~~~l~~~~~~i~~~L~~g~~V~l~gf 48 (94)
T 1owf_B 4 SELIERLATQQSHIPAKTV-------EDAVKEMLEHMASTLAQGERIAIRGF 48 (94)
T ss_dssp HHHHHHHHHHCTTSCHHHH-------HHHHHHHHHHHHHHHHTTCCEEETTT
T ss_pred HHHHHHHHHhcCCCCHHHH-------HHHHHHHHHHHHHHHhCCCeEEEcCc
Confidence 34555555442 5455443 56688999999999999999999865
No 118
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=55.80 E-value=27 Score=25.57 Aligned_cols=35 Identities=6% Similarity=0.132 Sum_probs=26.2
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
..+||+++.. .......++.+.+.+.++.||.+++
T Consensus 134 ~~~fD~V~~d-~~~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 134 EHQFDFIFID-ADKTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp SSCEEEEEEE-SCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCEeEEEEc-CChHHhHHHHHHHHHhcCCCeEEEE
Confidence 3579987754 3444556677788899999999998
No 119
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=55.74 E-value=13 Score=24.41 Aligned_cols=26 Identities=8% Similarity=0.132 Sum_probs=23.2
Q ss_pred hhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 34 NITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 34 ~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
+..++.|.+.|.+++.+|+.|-||=|
T Consensus 22 ~~~l~~~~~~i~~~L~~g~~V~l~gf 47 (99)
T 3c4i_A 22 TAAVENVVDTIVRAVHKGDSVTITGF 47 (99)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEETTT
T ss_pred HHHHHHHHHHHHHHHhCCCEEEECCC
Confidence 56688999999999999999999865
No 120
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=55.23 E-value=30 Score=23.08 Aligned_cols=38 Identities=13% Similarity=-0.040 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHhcCCeEEEcCCc-hHHH--HHHHHHHH
Q psy9123 35 ITCDEKWMRDIKNQNESGSVLVPCYP-SGVI--YDLFECLS 72 (118)
Q Consensus 35 ~~~~eL~~~I~~Tl~~GG~VLIPaFa-vGRt--qELL~~L~ 72 (118)
+..++..+.|.+..++||+|+|=|.+ +||+ .-+.|++.
T Consensus 65 ~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~ 105 (144)
T 3s4e_A 65 SYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMN 105 (144)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 34678888999999999999999988 5784 33445554
No 121
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=55.15 E-value=6.8 Score=27.39 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=29.3
Q ss_pred CceeEEEEccccchh--hHHHHHHHHH-HHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDI-KNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~-~Tl~~GG~VLIPaF 59 (118)
..+||+++.....+- ..+++.+.+. +.++.||.++|-..
T Consensus 101 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 101 PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 457999998776542 2356777888 89999999999653
No 122
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=54.92 E-value=11 Score=26.77 Aligned_cols=32 Identities=9% Similarity=-0.106 Sum_probs=23.8
Q ss_pred ceeEEEEccc----cchhhHHHHHHHHHHHHhcCCe
Q psy9123 22 SKIAVLLHSD----LNNITCDEKWMRDIKNQNESGS 53 (118)
Q Consensus 22 ~~~~~~~~~~----~~~~~~~eL~~~I~~Tl~~GG~ 53 (118)
.+||+++... ++.+..+++.+.+.+.++.||.
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 4799987432 3344456688889999999998
No 123
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=54.66 E-value=24 Score=25.16 Aligned_cols=37 Identities=11% Similarity=0.048 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.++.+.+.+.++.||.+++-+....-..+++..+.+.
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 169 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEY 169 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 6788889999999999999887776666777776654
No 124
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=54.46 E-value=27 Score=25.10 Aligned_cols=34 Identities=3% Similarity=0.150 Sum_probs=25.6
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++.. .......++.+.+.+.++.||.+++
T Consensus 147 ~~fD~V~~d-~~~~~~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 147 PEFDLIFID-ADKRNYPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp CCEEEEEEC-SCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CCcCEEEEC-CCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 579988753 3344456677778889999999998
No 125
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=54.35 E-value=21 Score=27.11 Aligned_cols=80 Identities=8% Similarity=-0.031 Sum_probs=46.5
Q ss_pred CceeEEEEcccc----ch--hhH--HHHHHHHHHHHhcCC--eEEEcCCchHHHH---HHHHHHHHHhhcCCC-------
Q psy9123 21 QSKIAVLLHSDL----NN--ITC--DEKWMRDIKNQNESG--SVLVPCYPSGVIY---DLFECLSSHLDNSSL------- 80 (118)
Q Consensus 21 ~~~~~~~~~~~~----~~--~~~--~eL~~~I~~Tl~~GG--~VLIPaFavGRtq---ELL~~L~~l~~~~~L------- 80 (118)
..+||+++..-- .. +.. .++.+.+.+.++.|| .+++-.|. .... +++..+.+++....+
T Consensus 138 ~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~-~~~~~~~~~l~~l~~~f~~v~~~k~~sR~ 216 (265)
T 2oxt_A 138 VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC-PYSVEVMERLSVMQRKWGGGLVRNPYSRN 216 (265)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC-TTSHHHHHHHHHHHHHHCCEEECCTTSCT
T ss_pred CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC-CCChhHHHHHHHHHHHcCCEEEEEecccC
Confidence 457999876311 10 111 125677888999999 99997776 3334 666666665543211
Q ss_pred CCCCEEEeChhHHHHHHHHHH
Q psy9123 81 TQIPMFFISPVADISLAYSNI 101 (118)
Q Consensus 81 p~iPIyldSPmA~~al~~~~~ 101 (118)
..--+|+..---.+...+.+.
T Consensus 217 ~s~E~y~v~~~~~~~~~~~~~ 237 (265)
T 2oxt_A 217 STHEMYFTSRAGGNIIGAVTA 237 (265)
T ss_dssp TCCCEEEESSCCSCHHHHHHH
T ss_pred CCccEEEEecCCCCcchhhHH
Confidence 235678877554444444443
No 126
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=54.28 E-value=9.3 Score=26.79 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=27.5
Q ss_pred CceeEEEEc-cc----cc-hhhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLH-SD----LN-NITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~-~~----~~-~~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++. .+ +. .+...++.+.+.+.++.||.++|=.
T Consensus 98 ~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 357999993 32 21 2445677888889999999999954
No 127
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=54.24 E-value=8.7 Score=27.08 Aligned_cols=38 Identities=3% Similarity=-0.066 Sum_probs=28.8
Q ss_pred CceeEEEEccccch--hhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNN--ITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~--~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++...... ....++.+.+.+.++.||.++|-.
T Consensus 114 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 114 NEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp TTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 46899998766543 223567888889999999999954
No 128
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=53.88 E-value=8 Score=28.58 Aligned_cols=49 Identities=10% Similarity=0.131 Sum_probs=35.6
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
.+||+++. |.++. .++.+.+.+.++.||.+++=........+++..|.+
T Consensus 180 ~~~D~V~~-~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~ 228 (277)
T 1o54_A 180 KDVDALFL-DVPDP--WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQE 228 (277)
T ss_dssp CSEEEEEE-CCSCG--GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CccCEEEE-CCcCH--HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 47998876 43322 356667788899999999977767777777777754
No 129
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=53.59 E-value=11 Score=28.50 Aligned_cols=36 Identities=17% Similarity=0.027 Sum_probs=28.1
Q ss_pred ceeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||+++.+... ++...++.+.+.+.++.||.++|=
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 369999877654 444568888899999999999884
No 130
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=53.46 E-value=6.5 Score=28.99 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=37.7
Q ss_pred HHHHHhcCCeEEEc----------CCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHHHH
Q psy9123 44 DIKNQNESGSVLVP----------CYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPVADIS 95 (118)
Q Consensus 44 I~~Tl~~GG~VLIP----------aFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~~a 95 (118)
|...+++|..||.- .++-|.-++.+..|.++...+..|+.=||++-|-..-.
T Consensus 102 i~~~l~~g~~Vi~DRy~~s~~ayqg~~r~~~~~~~~~l~~~~~~~~~pd~vi~L~~~~e~~~ 163 (229)
T 4eaq_A 102 VIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGR 163 (229)
T ss_dssp CHHHHHTTCEEEEECCHHHHCCCCCCCSCSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHH
T ss_pred HHHHHHCCCEEEECCchhHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCEEEEEeCCHHHHH
Confidence 34566788888888 67666667777777776555556788899999876544
No 131
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=53.21 E-value=14 Score=26.67 Aligned_cols=34 Identities=3% Similarity=-0.081 Sum_probs=27.1
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||+++.... ...+++.+.+.+.++.||.+++-
T Consensus 140 ~~fD~V~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 140 ESYDIVTARAV--ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TCEEEEEEECC--SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEEecc--CCHHHHHHHHHHhcCCCCEEEEE
Confidence 47999987664 33577888888899999999874
No 132
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=53.17 E-value=21 Score=25.01 Aligned_cols=53 Identities=13% Similarity=-0.016 Sum_probs=36.6
Q ss_pred ceeEEEEccccchh----------hHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNI----------TCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~~~----------~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++..--... ...++.+.+.+.++.||.+++-+..-.-..+++..+.+.
T Consensus 110 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 172 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQY 172 (214)
T ss_dssp TCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHC
Confidence 35888775422110 235788889999999999999887766666666666543
No 133
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=52.63 E-value=36 Score=27.10 Aligned_cols=77 Identities=9% Similarity=0.072 Sum_probs=50.6
Q ss_pred CceeEEEEccccchhh----------HHHHHHHHHHHHhcCC-eEEEcCCch--HHHHHHHHHHHHHhhcCCC-------
Q psy9123 21 QSKIAVLLHSDLNNIT----------CDEKWMRDIKNQNESG-SVLVPCYPS--GVIYDLFECLSSHLDNSSL------- 80 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~----------~~eL~~~I~~Tl~~GG-~VLIPaFav--GRtqELL~~L~~l~~~~~L------- 80 (118)
+-++||+| ||..+.+ .. ..+...+.++.|| +.++=+|.- .-..+++..+.+.|....+
T Consensus 137 ~~~~DvVL-SDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~vkvk~paSR~ 214 (269)
T 2px2_A 137 SEISDTLL-CDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGGGLVRVPLSRN 214 (269)
T ss_dssp CCCCSEEE-ECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCTTSCT
T ss_pred CCCCCEEE-eCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCCEEEECCCCCC
Confidence 55889877 6653322 22 3455667899999 999999994 3556666677777766443
Q ss_pred CCCCEEEeChhHHHHHHHH
Q psy9123 81 TQIPMFFISPVADISLAYS 99 (118)
Q Consensus 81 p~iPIyldSPmA~~al~~~ 99 (118)
.+-=||+.+-...+++...
T Consensus 215 ~S~E~YlVa~~~~n~~~~v 233 (269)
T 2px2_A 215 SNHEMYWVSGASGNIVHAV 233 (269)
T ss_dssp TCCCEEEETTCCSCHHHHH
T ss_pred CCccEEEEecccCcHHHHH
Confidence 2356898887665554433
No 134
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=52.53 E-value=9.9 Score=28.78 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=26.9
Q ss_pred ceeEEEEccccchhhH-------------HHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNITC-------------DEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~-------------~eL~~~I~~Tl~~GG~VLIP 57 (118)
+++||++.+|....+. .+.++.|.+-+++||.+++=
T Consensus 76 ~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 76 NRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hcCCEEEEeCCchhhcccccccccccccChHHHHHHHHHHHhCCEEEEE
Confidence 5799999998776543 34567888888888887774
No 135
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=52.52 E-value=8.5 Score=28.92 Aligned_cols=52 Identities=2% Similarity=-0.029 Sum_probs=38.2
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCch-----HHHHHHHHHHHHH
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPS-----GVIYDLFECLSSH 74 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFav-----GRtqELL~~L~~l 74 (118)
..+||+++. |.+. ...++...+.+.++.||.+++-+++. +...+.+..+.+.
T Consensus 184 ~~~~D~Vi~-d~p~-~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~ 240 (272)
T 3a27_A 184 KDVADRVIM-GYVH-KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEK 240 (272)
T ss_dssp TTCEEEEEE-CCCS-SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHH
T ss_pred cCCceEEEE-CCcc-cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHH
Confidence 457998865 4443 34556667778899999999999987 6777777777654
No 136
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=52.21 E-value=12 Score=26.66 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=27.7
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEc
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..+||+++......- ...++.+.+.+.++.||.+++-
T Consensus 102 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 102 DESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 357999988765332 2456777888999999999885
No 137
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=51.98 E-value=7.4 Score=30.15 Aligned_cols=36 Identities=17% Similarity=0.149 Sum_probs=27.7
Q ss_pred ceeEEEEccccchhhH-------------HHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNITC-------------DEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~-------------~eL~~~I~~Tl~~GG~VLIP 57 (118)
++|||++.+|....+. ..=++.|.+-+++||-+|+=
T Consensus 69 ~~yDvIIl~d~~~~~~l~~~~~~~~~~~~~~~~~~l~~~V~~GGgLi~~ 117 (248)
T 3soz_A 69 ACYDAIVISDIGSNTFLLQNRTFYNMDIIPDALQLIADYVAEGGGLLMI 117 (248)
T ss_dssp HTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hcCCEEEEcCCCcchhccCccccccccCCHHHHHHHHHHHHhCCEEEEE
Confidence 6899999999987654 12267888888888888874
No 138
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=51.90 E-value=11 Score=28.17 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=28.4
Q ss_pred ceeEEEEccccch-----hhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 22 SKIAVLLHSDLNN-----ITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 22 ~~~~~~~~~~~~~-----~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
.+||+++...... +...++.+.+.+.++.||.++|-.+
T Consensus 186 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 186 EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 6899999866332 2233578889999999999998553
No 139
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=51.82 E-value=12 Score=27.21 Aligned_cols=40 Identities=8% Similarity=-0.041 Sum_probs=29.8
Q ss_pred CceeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 21 QSKIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 21 ~~~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
..+||+++..... ++ ..++.+.+.+.++.||.++|-.+..
T Consensus 112 ~~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp TTCEEEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred CCCEEEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 4579998876521 23 6778888899999999999865544
No 140
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=51.41 E-value=8 Score=27.99 Aligned_cols=38 Identities=5% Similarity=-0.003 Sum_probs=28.7
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++......- ...++.+.+.+.++.||.++|-.
T Consensus 127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 357999987765432 24677888889999999999854
No 141
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=51.01 E-value=13 Score=27.61 Aligned_cols=43 Identities=12% Similarity=0.139 Sum_probs=30.7
Q ss_pred CceeEEEEcc-c----cchhhHHHHHHHHHHHHhcCCeEEEcCCchHH
Q psy9123 21 QSKIAVLLHS-D----LNNITCDEKWMRDIKNQNESGSVLVPCYPSGV 63 (118)
Q Consensus 21 ~~~~~~~~~~-~----~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGR 63 (118)
..+||+++.+ . ...+...++.+.+.+.++.||.++|=.+....
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 4679976643 2 23334578888899999999999996665544
No 142
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=50.93 E-value=13 Score=28.95 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=27.4
Q ss_pred ceeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+.+.+... .+...++.+.+.+.++.||.++|
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (363)
T 3dp7_A 247 TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYI 285 (363)
T ss_dssp CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 468988876543 44556788889999999999998
No 143
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=50.49 E-value=9.8 Score=27.04 Aligned_cols=51 Identities=4% Similarity=-0.065 Sum_probs=31.6
Q ss_pred ceeEEEEccccchhhHH--HHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCD--EKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~--eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
.+||+++..--...... ++.+.+ +.++.||.+++--.......+.+..+.+
T Consensus 133 ~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 185 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG 185 (221)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH
T ss_pred CceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh
Confidence 57998876442322222 344444 7899999999976655445566655544
No 144
>3sxu_A DNA polymerase III subunit CHI; DNA replication, CHI binds to SSB and PSI, transferase; HET: DNA; 1.85A {Escherichia coli} SCOP: c.128.1.1 PDB: 1em8_A*
Probab=50.37 E-value=21 Score=25.44 Aligned_cols=56 Identities=18% Similarity=0.129 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCC----------CCCEEEeCh
Q psy9123 35 ITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSSLT----------QIPMFFISP 90 (118)
Q Consensus 35 ~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp----------~iPIyldSP 90 (118)
....-.|+.+.+++++|..|+|=+-.-.++..|=+.|+++-..+=|| .-||.+-.+
T Consensus 23 ~~~~~aCrL~~ka~~~G~rv~V~~~d~~~a~~LD~~LW~~~~~sFlPH~~~~~~~~~~~PV~L~~~ 88 (150)
T 3sxu_A 23 AVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWP 88 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSSTTCCCCEEETTCSSTTCCSEEEECT
T ss_pred HHHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHhCCCCCcccCCccCCCCCCCCCCEEEeCC
Confidence 35567899999999999999998888899999988888765554343 258887643
No 145
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=50.09 E-value=18 Score=27.93 Aligned_cols=56 Identities=13% Similarity=0.095 Sum_probs=36.7
Q ss_pred CceeEEEEccccchh-------hHHHHHHHHHHHHhcCCeEEEcC----CchHHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLNNI-------TCDEKWMRDIKNQNESGSVLVPC----YPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~-------~~~eL~~~I~~Tl~~GG~VLIPa----FavGRtqELL~~L~~l~~~ 77 (118)
..+||+++. |.... ...++.+.+.+.++.||.+++=. +....+.++...+.+.+..
T Consensus 166 ~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~ 232 (304)
T 2o07_A 166 QDAFDVIIT-DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPV 232 (304)
T ss_dssp SSCEEEEEE-ECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSE
T ss_pred CCCceEEEE-CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCC
Confidence 357999885 33321 12567888899999999999743 3334566676777766654
No 146
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=50.05 E-value=12 Score=28.41 Aligned_cols=36 Identities=8% Similarity=-0.088 Sum_probs=25.6
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
-.++|++++.--..+..+++..-+.+.++.||.++|
T Consensus 145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred cceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEE
Confidence 356897765433334445677778899999999998
No 147
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=49.92 E-value=7.8 Score=26.69 Aligned_cols=41 Identities=2% Similarity=0.031 Sum_probs=29.7
Q ss_pred ceeEEEEccccc--hhhHHHHHHHHHHHHhcCCeEEEcCCchH
Q psy9123 22 SKIAVLLHSDLN--NITCDEKWMRDIKNQNESGSVLVPCYPSG 62 (118)
Q Consensus 22 ~~~~~~~~~~~~--~~~~~eL~~~I~~Tl~~GG~VLIPaFavG 62 (118)
.+||+++.+... .+...++.+.+.+.++.||.++|-.+..+
T Consensus 93 ~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 93 DAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp TTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred CCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 479988865332 23456777888889999999999776544
No 148
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=49.87 E-value=9.8 Score=28.31 Aligned_cols=36 Identities=6% Similarity=-0.113 Sum_probs=27.6
Q ss_pred ceeEEEEccccchhh--HHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNIT--CDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~--~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||+++++.-..-. .++..+-+.+.++.||.++|-
T Consensus 134 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 134 QKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 479999988654432 456677888999999999984
No 149
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=49.82 E-value=6.9 Score=27.05 Aligned_cols=38 Identities=8% Similarity=0.061 Sum_probs=28.4
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++.++.... ..+++.+.+.+.++.||.+++-.
T Consensus 91 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred CCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 358999998765432 23577778888899999999844
No 150
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=49.79 E-value=18 Score=25.92 Aligned_cols=36 Identities=11% Similarity=0.065 Sum_probs=27.5
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++...- .....++.+.+.+.++.||.++++.
T Consensus 146 ~~fD~I~~~~~-~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 146 SSIDLFFLDAD-KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCEEEEEECSC-GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEEeCC-HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 57999886543 3444567778888999999999975
No 151
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=49.68 E-value=11 Score=29.21 Aligned_cols=36 Identities=8% Similarity=0.041 Sum_probs=24.7
Q ss_pred ceeEEEEccccchh-hHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNI-TCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~-~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
+++||++..|.... .-++-++.+.+-+++||.+|+=
T Consensus 49 ~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 49 AKQDLVILSDYPAERMTAQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HTCSEEEEESCCGGGBCHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCCEEEEcCCccccCCHHHHHHHHHHHHhCCeEEEe
Confidence 68999998876542 2244566777777778877764
No 152
>1exe_A Transcription factor 1; beta ribbon ARMS, DNA-binding, DNA-bending protein; NMR {Bacillus phage SPO1} SCOP: a.55.1.1 PDB: 1wtu_A
Probab=49.67 E-value=5.6 Score=26.27 Aligned_cols=27 Identities=4% Similarity=-0.156 Sum_probs=23.8
Q ss_pred chhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 33 NNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 33 ~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
.+..++.|.+.|.++|..|+.|-||=|
T Consensus 21 ~~~~l~~~~~~i~~~L~~G~~V~l~gf 47 (99)
T 1exe_A 21 VSKMLASFEKIITETVAKGDKVQLTGF 47 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCBTTT
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEECCc
Confidence 456789999999999999999999865
No 153
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=49.64 E-value=13 Score=27.82 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=26.9
Q ss_pred eeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEE
Q psy9123 23 KIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 23 ~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
+||+++.+.... +...++.+.+.+.++.||.++|
T Consensus 232 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 269 (335)
T 2r3s_A 232 DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIV 269 (335)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 499999866543 4456788888999999999888
No 154
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=49.52 E-value=15 Score=26.89 Aligned_cols=44 Identities=5% Similarity=-0.068 Sum_probs=32.0
Q ss_pred CceeEEEEcc-ccc----h-----hhHHHHHHHHHHHHhcCCeEEEcCCchHHH
Q psy9123 21 QSKIAVLLHS-DLN----N-----ITCDEKWMRDIKNQNESGSVLVPCYPSGVI 64 (118)
Q Consensus 21 ~~~~~~~~~~-~~~----~-----~~~~eL~~~I~~Tl~~GG~VLIPaFavGRt 64 (118)
..+||+++.. ... + +...++.+.+.+.++.||.++|-.......
T Consensus 128 ~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (293)
T 3thr_A 128 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYI 181 (293)
T ss_dssp TTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred CCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHH
Confidence 4579999875 332 1 336778888899999999999876654443
No 155
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=49.31 E-value=12 Score=28.74 Aligned_cols=34 Identities=15% Similarity=0.046 Sum_probs=27.0
Q ss_pred eeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 23 KIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 23 ~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
+||+.+.+... ++...++.+.+.+.++.||.++|
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i 284 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLV 284 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 79988876543 34446788889999999999998
No 156
>3h16_A TIR protein; bacteria TIR domain, signaling protein; 2.50A {Paracoccus denitrificans PD1222}
Probab=48.99 E-value=7.2 Score=27.17 Aligned_cols=54 Identities=19% Similarity=0.124 Sum_probs=33.7
Q ss_pred CCCCchhHHHHhhcccCCCceeEEEEccccchhh---HHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 3 QNGDNLDSLIASTASSNGQSKIAVLLHSDLNNIT---CDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
..|+++..-|... -.+|++-|+|.|.--..+ ..||..++. ....||..+||+|-
T Consensus 58 ~~G~~~~~~i~~a---i~~s~~~i~v~S~~y~~S~wc~~El~~~~~-~~~~~~~~iiPV~~ 114 (154)
T 3h16_A 58 RPGDSLRRSIDKG---LGSSRFGIVVLSTHFFKKEWPQKELDGLFQ-LESSGRSRILPIWH 114 (154)
T ss_dssp CTTCCHHHHHHHH---HTSEEEEEEEEEHHHHTTCCCHHHHHHHTC-CCTTSCCCEEEEEE
T ss_pred CCccHHHHHHHHH---HHhCcEEEEEeCcchhcChHHHHHHHHHHH-HHhcCCCEEEEEEe
Confidence 4577766555332 246788888887654443 456665554 34567888999863
No 157
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=48.89 E-value=35 Score=25.51 Aligned_cols=52 Identities=6% Similarity=0.098 Sum_probs=34.4
Q ss_pred ceeEEEEcccc----chhhHHHHHHHHHHHHhcCCeEEEc---CCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDL----NNITCDEKWMRDIKNQNESGSVLVP---CYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLIP---aFavGRtqELL~~L~~ 73 (118)
.++|+.+..-. +..-.+++.+-|.+.++.||.++|- .+.-.+.++.+..++.
T Consensus 138 ~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~ 196 (261)
T 4gek_A 138 ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHH 196 (261)
T ss_dssp CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHH
T ss_pred cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHH
Confidence 35777665432 2333457888999999999999882 3444666776666544
No 158
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=48.72 E-value=14 Score=27.51 Aligned_cols=40 Identities=8% Similarity=0.082 Sum_probs=29.7
Q ss_pred CceeEEEEccccch-----------hhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSDLNN-----------ITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~~~~-----------~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
..+||+++.....+ +...++.+.+.+.++.||.++|-.+.
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 45799988765433 33467888889999999999985543
No 159
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=48.68 E-value=17 Score=26.34 Aligned_cols=36 Identities=11% Similarity=-0.125 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 39 EKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 39 eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
++.+.+.+.++.||.++|=+..-.-+.+++..+...
T Consensus 131 ~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 131 PFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSI 166 (218)
T ss_dssp HHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 588899999999999999998887777888777654
No 160
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=48.29 E-value=13 Score=25.47 Aligned_cols=39 Identities=15% Similarity=0.015 Sum_probs=27.0
Q ss_pred CceeEEEEccccch---hhHHHHHHHHHH--HHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDLNN---ITCDEKWMRDIK--NQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~~~---~~~~eL~~~I~~--Tl~~GG~VLIPaF 59 (118)
..+||+++...-.. ...+++.+.+.+ .++.||.++|=..
T Consensus 111 ~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 111 TSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp SSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 45799887753322 335667777777 8999999998543
No 161
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=48.22 E-value=9.4 Score=26.70 Aligned_cols=35 Identities=3% Similarity=-0.199 Sum_probs=25.6
Q ss_pred ceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++..+..+ ....++.+.+.+.++.||.+++
T Consensus 101 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~ 139 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVS 139 (219)
T ss_dssp TTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred CCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEE
Confidence 4799999776433 3346778888889999995554
No 162
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=48.03 E-value=12 Score=28.52 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=27.7
Q ss_pred ceeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++.+... ++...++.+.+.+.++.||.++|
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 349998876544 34457888889999999999998
No 163
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=47.89 E-value=9.5 Score=26.71 Aligned_cols=35 Identities=0% Similarity=-0.244 Sum_probs=26.2
Q ss_pred ceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++.....+ ....++.+.+.+.++.||.+++
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~ 139 (217)
T 3jwh_A 101 HGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVT 139 (217)
T ss_dssp CSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred CCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4799999877544 3446788888899999995554
No 164
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=46.98 E-value=14 Score=27.55 Aligned_cols=36 Identities=14% Similarity=-0.034 Sum_probs=27.1
Q ss_pred ceeEEEEcc----ccchhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHS----DLNNITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~----~~~~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||+++.. -++.+..+.+.+.+.+.++.||.+++=
T Consensus 151 ~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 151 GKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp CCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 479998843 234555677888999999999998643
No 165
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=46.84 E-value=5.9 Score=28.49 Aligned_cols=42 Identities=10% Similarity=0.117 Sum_probs=29.5
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHH
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYD 66 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqE 66 (118)
+++||+++...-.....+ .+.+.++.||.++|++..-+..++
T Consensus 156 ~~~fD~Ii~~~~~~~~~~----~~~~~L~pgG~lvi~~~~~~~~~~ 197 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKIPE----PLIEQLKIGGKLIIPVGSYHLWQE 197 (235)
T ss_dssp GCCEEEEEECSBBSSCCH----HHHHTEEEEEEEEEEECSSSSCEE
T ss_pred CCCccEEEECCcHHHHHH----HHHHhcCCCcEEEEEEecCCCccE
Confidence 346999987765554433 456789999999999876543333
No 166
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=46.49 E-value=12 Score=27.38 Aligned_cols=40 Identities=8% Similarity=0.052 Sum_probs=30.1
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
..+||+++......- ...++.+.+.+.++.||.++|-.+.
T Consensus 134 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 467999998765532 2356788888999999999986554
No 167
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=46.39 E-value=14 Score=26.76 Aligned_cols=36 Identities=14% Similarity=0.068 Sum_probs=27.4
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLI 56 (118)
..+||+++....... ..+++.+.+.+.++.||.++|
T Consensus 103 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEE
Confidence 457999987754432 135778888999999999998
No 168
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=46.39 E-value=44 Score=23.89 Aligned_cols=59 Identities=12% Similarity=0.087 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCC----------chHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCY----------PSGVIYDLFECLSSHLDNSSLTQIPMFFISPVADIS 95 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaF----------avGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~~a 95 (118)
..++.+.|...+++|..||.==| ..|.-.+.++.|+.....+-.|++-+|+|-|.....
T Consensus 68 r~~~~~~I~~~L~~g~~Vi~DRy~~S~~ayq~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ld~~~e~~~ 136 (197)
T 3hjn_A 68 RNLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETAL 136 (197)
T ss_dssp HHHHHHHHHHHHTTTCEEEEESCHHHHHHHHTTTTCSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEecccchHHHHHHHhccCCCHHHHHHHHhhhhcCCCCCceeecCcChHHHH
Confidence 45666778888998888876433 234446778888877777777999999999976543
No 169
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=46.20 E-value=52 Score=25.88 Aligned_cols=68 Identities=10% Similarity=0.025 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHHhcCCeEEEcCCchHH-HHHHHHHHHHHhhcCCCCCCCE-EEeChhH-HHHHHHHHHHHh
Q psy9123 35 ITCDEKWMRDIKNQNESGSVLVPCYPSGV-IYDLFECLSSHLDNSSLTQIPM-FFISPVA-DISLAYSNILAE 104 (118)
Q Consensus 35 ~~~~eL~~~I~~Tl~~GG~VLIPaFavGR-tqELL~~L~~l~~~~~Lp~iPI-yldSPmA-~~al~~~~~~~E 104 (118)
.-+.+-.++|.++++..++++| +|+-|- =.-||+++.+++...+. ++|+ |+|+..- .+..++.+.+.+
T Consensus 30 ~le~~a~~ilr~~~~~~~~ivV-a~SGGkDS~vLL~Ll~~~~~~~~~-~i~vv~vDtg~~~~et~~~v~~~~~ 100 (325)
T 1zun_A 30 QLEAESIHIIREVAAEFDNPVM-LYSIGKDSAVMLHLARKAFFPGKL-PFPVMHVDTRWKFQEMYRFRDQMVE 100 (325)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEE-ECCSSHHHHHHHHHHHHHHTTSCC-SSCEEEECCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE-EEcChHHHHHHHHHHHHhccccCC-CEEEEEEECCCCCHHHHHHHHHHHH
Confidence 3345567788888888888877 788777 34566666666554333 3555 6666543 344444544443
No 170
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=45.86 E-value=36 Score=24.66 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcCCeEEEcC----------CchHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHHHH
Q psy9123 38 DEKWMRDIKNQNESGSVLVPC----------YPSGVIYDLFECLSSHLDNSSLTQIPMFFISPVADIS 95 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPa----------FavGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~~a 95 (118)
+.+.+.|...+++|..||.== ++-|.-.+.+..++++...+..|++-||+|-|.....
T Consensus 72 ~~~~~~i~p~l~~g~~Vi~DRy~~S~~ayq~~~~~~~~~~~~~l~~~~~~~~~PDl~i~Ld~~~e~~~ 139 (205)
T 4hlc_A 72 EHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGR 139 (205)
T ss_dssp HHHHHTHHHHHHTTCEEEEECCHHHHHHHTTTTTSSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEecCcccchHHHHhccccchHHHHHHHHHHHhcCCCCCEEeeeCCCHHHHH
Confidence 345666777888887776432 2223346677777777666667999999999976544
No 171
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=45.63 E-value=16 Score=26.90 Aligned_cols=34 Identities=9% Similarity=-0.030 Sum_probs=25.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++.. .......++.+.+.+.++.||.+++
T Consensus 155 ~~fD~V~~d-~~~~~~~~~l~~~~~~LkpGG~lv~ 188 (247)
T 1sui_A 155 GSYDFIFVD-ADKDNYLNYHKRLIDLVKVGGVIGY 188 (247)
T ss_dssp TCBSEEEEC-SCSTTHHHHHHHHHHHBCTTCCEEE
T ss_pred CCEEEEEEc-CchHHHHHHHHHHHHhCCCCeEEEE
Confidence 579987753 3333456677788889999999987
No 172
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=45.43 E-value=8.7 Score=28.89 Aligned_cols=38 Identities=8% Similarity=-0.053 Sum_probs=28.0
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
..+||+++. |.+... .++.+.+.+.++.||.+++=.+.
T Consensus 190 ~~~fD~Vi~-~~p~~~-~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 190 ENIADRILM-GYVVRT-HEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CSCEEEEEE-CCCSSG-GGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCccEEEE-CCchhH-HHHHHHHHHHCCCCeEEEEEEee
Confidence 468998876 555443 56677778899999999996555
No 173
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=45.42 E-value=9.7 Score=27.14 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=26.3
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||+++...-. ....++.+.+.+.++.||.+++.
T Consensus 125 ~~fD~I~~~~~~-~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 125 PLFDVLFIDAAK-GQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CCEEEEEEEGGG-SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCH-HHHHHHHHHHHHHcCCCeEEEEE
Confidence 479998864433 34466677778889999999997
No 174
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=45.01 E-value=17 Score=27.50 Aligned_cols=52 Identities=6% Similarity=0.032 Sum_probs=34.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcC----CchHHHHHHHHHHHHHhh
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPC----YPSGVIYDLFECLSSHLD 76 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPa----FavGRtqELL~~L~~l~~ 76 (118)
.+||++++. .. ++. .+.+.+.+.++.||.+++.+ +.......+...+.+.+.
T Consensus 138 ~~fD~Ii~d-~~-dp~-~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 193 (262)
T 2cmg_A 138 KKYDLIFCL-QE-PDI-HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFS 193 (262)
T ss_dssp CCEEEEEES-SC-CCH-HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCS
T ss_pred hhCCEEEEC-CC-ChH-HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCC
Confidence 579999864 33 333 37788899999999999843 333345555555555443
No 175
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=44.91 E-value=15 Score=26.22 Aligned_cols=36 Identities=6% Similarity=0.068 Sum_probs=27.1
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLI 56 (118)
..+||+++......- ...++...+.+.++.||.++|
T Consensus 85 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEE
Confidence 357999987754421 245677888899999999998
No 176
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=44.88 E-value=7.1 Score=27.88 Aligned_cols=36 Identities=14% Similarity=-0.002 Sum_probs=26.3
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEE
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLI 56 (118)
..+||+++....... ...++.+.+.+.++.||.++|
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEE
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 357999987554432 235667778889999999998
No 177
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=44.85 E-value=15 Score=26.91 Aligned_cols=33 Identities=3% Similarity=0.029 Sum_probs=22.7
Q ss_pred eeEEEEccccchhhHHHHHHHHHH-HHhcCCeEEE
Q psy9123 23 KIAVLLHSDLNNITCDEKWMRDIK-NQNESGSVLV 56 (118)
Q Consensus 23 ~~~~~~~~~~~~~~~~eL~~~I~~-Tl~~GG~VLI 56 (118)
+||+++...-.. ...++...+.+ .++.||.++|
T Consensus 152 ~fD~I~~d~~~~-~~~~~l~~~~r~~LkpGG~lv~ 185 (236)
T 2bm8_A 152 AHPLIFIDNAHA-NTFNIMKWAVDHLLEEGDYFII 185 (236)
T ss_dssp CSSEEEEESSCS-SHHHHHHHHHHHTCCTTCEEEE
T ss_pred CCCEEEECCchH-hHHHHHHHHHHhhCCCCCEEEE
Confidence 689876433222 34555666675 9999999999
No 178
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=44.73 E-value=49 Score=25.49 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=16.7
Q ss_pred HHHHHHhcCCeEEEcCCchHH--HHHHHHHHHHHh
Q psy9123 43 RDIKNQNESGSVLVPCYPSGV--IYDLFECLSSHL 75 (118)
Q Consensus 43 ~I~~Tl~~GG~VLIPaFavGR--tqELL~~L~~l~ 75 (118)
.+.++-++.+.|+-|-|++|. +++|+....+++
T Consensus 114 ~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l 148 (272)
T 4f3y_A 114 QLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQF 148 (272)
T ss_dssp HHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 344444555556666666664 334444444444
No 179
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=44.35 E-value=13 Score=25.01 Aligned_cols=41 Identities=7% Similarity=-0.108 Sum_probs=25.9
Q ss_pred ceeEEEEccccc-hhhHHHHHHHHH--HHHhcCCeEEEcCCchH
Q psy9123 22 SKIAVLLHSDLN-NITCDEKWMRDI--KNQNESGSVLVPCYPSG 62 (118)
Q Consensus 22 ~~~~~~~~~~~~-~~~~~eL~~~I~--~Tl~~GG~VLIPaFavG 62 (118)
.+||+++...-. ....+++.+.+. +.++.||.+++-+....
T Consensus 99 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 99 GRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 359988865332 233344555555 67899999998665543
No 180
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=44.29 E-value=18 Score=25.68 Aligned_cols=35 Identities=3% Similarity=0.093 Sum_probs=25.5
Q ss_pred ceeEEEEcc--cc---chhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHS--DL---NNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~--~~---~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++.. .. ..+...++.+.+.+.++.||.+++
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 479998843 21 224456778888899999999985
No 181
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=44.19 E-value=14 Score=26.46 Aligned_cols=39 Identities=5% Similarity=-0.066 Sum_probs=27.4
Q ss_pred ceeEEEEc-------cccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLH-------SDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~-------~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.+||+++. .+......+.+.+.+.+.++.||.+++-.+.
T Consensus 127 ~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 127 GHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred CceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 57999876 1222233456678889999999999976544
No 182
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=43.49 E-value=37 Score=25.49 Aligned_cols=59 Identities=17% Similarity=0.270 Sum_probs=38.5
Q ss_pred CCCCchhHHHHhhccc--CCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchH
Q psy9123 3 QNGDNLDSLIASTASS--NGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSG 62 (118)
Q Consensus 3 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavG 62 (118)
|.|.+|.+=++..... +.+..--+++.+|++.-+.+.|.+++. .++.+..|+.|+.--|
T Consensus 82 q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~-~l~~~d~VigPa~dGG 142 (242)
T 3cgx_A 82 QQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALN-DLQHYDAAIGPAFDGG 142 (242)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHH-HTTTCSEEEEEBTTSS
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHH-HhccCCeEEEEcCCCC
Confidence 4555665544333221 123344688889999999888887765 5777778888876544
No 183
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=43.47 E-value=8.1 Score=30.10 Aligned_cols=50 Identities=8% Similarity=0.051 Sum_probs=33.1
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
.+||+++. |.+... .++.+.+.+.++.||.+++-++.-. ..++...+.+.
T Consensus 257 ~~fD~Vi~-dpP~~~-~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~ 306 (336)
T 2yx1_A 257 VKGNRVIM-NLPKFA-HKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKK 306 (336)
T ss_dssp CCEEEEEE-CCTTTG-GGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHH
T ss_pred CCCcEEEE-CCcHhH-HHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHh
Confidence 57998876 554443 3677778888999999988666554 34444444443
No 184
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=43.32 E-value=4.9 Score=27.52 Aligned_cols=35 Identities=0% Similarity=-0.249 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHH
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLS 72 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~ 72 (118)
.++.+.+.+.++.||.+++=..+.....++...+.
T Consensus 144 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~ 178 (215)
T 4dzr_A 144 RRMAALPPYVLARGRAGVFLEVGHNQADEVARLFA 178 (215)
T ss_dssp HHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTG
T ss_pred HHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHH
Confidence 56666777889999994443444444444444443
No 185
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=43.18 E-value=13 Score=26.49 Aligned_cols=38 Identities=11% Similarity=0.053 Sum_probs=28.3
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++......- ...++.+.+.+.++.||.++|-.
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 457999988765432 24567778888999999999843
No 186
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=43.01 E-value=8.7 Score=26.56 Aligned_cols=35 Identities=6% Similarity=-0.017 Sum_probs=26.7
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++.... ....++.+.+.+.++.||.+++-.
T Consensus 131 ~~~D~i~~~~~--~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 131 PPFDGVISRAF--ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SCEEEEECSCS--SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCcCEEEEecc--CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 47999986544 334677788888899999998864
No 187
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=42.78 E-value=19 Score=26.15 Aligned_cols=34 Identities=3% Similarity=0.068 Sum_probs=25.9
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++. |.......++.+.+.+.++.||.+++
T Consensus 128 ~~fD~V~~-d~~~~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 128 DSYQLVFG-QVSPMDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp TCEEEEEE-CCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcCeEEE-cCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence 57998875 44444456677788899999999998
No 188
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=42.13 E-value=18 Score=28.14 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=25.5
Q ss_pred eEEEEcc----ccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 24 IAVLLHS----DLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 24 ~~~~~~~----~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.|+.+.+ |.+++.+.++.+-+.++++.||.+||
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli 281 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILV 281 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 4666554 34556677888899999999999998
No 189
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=42.10 E-value=18 Score=28.73 Aligned_cols=40 Identities=10% Similarity=0.112 Sum_probs=30.7
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
...||+++.+.+. ...+++.+.+.+.++.||.+++.....
T Consensus 186 d~~FDvV~~~a~~-~d~~~~l~el~r~LkPGG~Lvv~~~~~ 225 (298)
T 3fpf_A 186 GLEFDVLMVAALA-EPKRRVFRNIHRYVDTETRIIYRTYTG 225 (298)
T ss_dssp GCCCSEEEECTTC-SCHHHHHHHHHHHCCTTCEEEEEECCG
T ss_pred CCCcCEEEECCCc-cCHHHHHHHHHHHcCCCcEEEEEcCcc
Confidence 3579999876664 344677888899999999999976543
No 190
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=41.82 E-value=16 Score=28.46 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=28.0
Q ss_pred CceeEEEEccc-----cchhhHHHHHHHHHHHHhcCCeEE
Q psy9123 21 QSKIAVLLHSD-----LNNITCDEKWMRDIKNQNESGSVL 55 (118)
Q Consensus 21 ~~~~~~~~~~~-----~~~~~~~eL~~~I~~Tl~~GG~VL 55 (118)
..+||+++... ..+...+.+.+.+.+.++.||.++
T Consensus 131 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 131 VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred CCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 36899998743 355677888889999999999876
No 191
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=41.80 E-value=13 Score=28.62 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=35.0
Q ss_pred CceeEEEEccccchhh----------HHHHHHHHHHHHhcCCeEEEcCCc-----hHHHHHHHHHHHHHh
Q psy9123 21 QSKIAVLLHSDLNNIT----------CDEKWMRDIKNQNESGSVLVPCYP-----SGVIYDLFECLSSHL 75 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~----------~~eL~~~I~~Tl~~GG~VLIPaFa-----vGRtqELL~~L~~l~ 75 (118)
..+||+++.. ..... ..++.+.+.+.++.||.+++=+.+ .....++...+.+.+
T Consensus 149 ~~~fD~Ii~d-~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F 217 (314)
T 1uir_A 149 EERYDVVIID-LTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAF 217 (314)
T ss_dssp CCCEEEEEEE-CCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTC
T ss_pred CCCccEEEEC-CCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHC
Confidence 3579998863 22211 368888999999999999985432 234555555555544
No 192
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=41.66 E-value=34 Score=26.86 Aligned_cols=55 Identities=9% Similarity=0.049 Sum_probs=36.8
Q ss_pred CceeEEEEccccc------hh-hHHHHHHHHHHHHhcCCeEEE----cCCchHHHHHHHHHHHHHhh
Q psy9123 21 QSKIAVLLHSDLN------NI-TCDEKWMRDIKNQNESGSVLV----PCYPSGVIYDLFECLSSHLD 76 (118)
Q Consensus 21 ~~~~~~~~~~~~~------~~-~~~eL~~~I~~Tl~~GG~VLI----PaFavGRtqELL~~L~~l~~ 76 (118)
..+||+++. |.. +. ...++.+.+.+.++.||.+++ |.+.-....+++..+.+.+.
T Consensus 192 ~~~fDlIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 192 EGSYDAVIV-DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFK 257 (334)
T ss_dssp TTCEEEEEE-CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCS
T ss_pred CCCccEEEE-CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCc
Confidence 357999886 322 11 136788889999999999999 44443345666666666655
No 193
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=41.57 E-value=21 Score=26.19 Aligned_cols=38 Identities=5% Similarity=-0.041 Sum_probs=28.2
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++......- ...++.+.+.+.++.||.++|-.
T Consensus 148 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 148 DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 357999988755422 14677888899999999998853
No 194
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=41.41 E-value=8.1 Score=27.53 Aligned_cols=41 Identities=17% Similarity=0.123 Sum_probs=29.6
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYD 66 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqE 66 (118)
.+||+++...-..... +.+.+.++.||.++||+.+-+..|+
T Consensus 162 ~~fD~I~~~~~~~~~~----~~~~~~LkpgG~lvi~~~~~~~~~~ 202 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP----TELINQLASGGRLIVPVGPDGGSQY 202 (227)
T ss_dssp CSEEEEEECSCBSSCC----HHHHHTEEEEEEEEEEESCSSSCEE
T ss_pred CCccEEEECCchHHHH----HHHHHHhcCCCEEEEEEecCCCceE
Confidence 4699998776555433 4566788999999999987544444
No 195
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=41.19 E-value=22 Score=26.27 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=26.8
Q ss_pred ceeEEEEccccchh-hHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNI-TCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~-~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++.+....- ...++.+.+.+.++.||.++|
T Consensus 112 ~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 58999987754322 345677888899999999998
No 196
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=41.11 E-value=24 Score=26.49 Aligned_cols=39 Identities=8% Similarity=-0.014 Sum_probs=29.0
Q ss_pred eeEEEEccc----cchhhHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 23 KIAVLLHSD----LNNITCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 23 ~~~~~~~~~----~~~~~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
+||+++... +.++...++...+.+.++.||.++|=.+..
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 678777554 233346788889999999999999876654
No 197
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=40.67 E-value=27 Score=25.14 Aligned_cols=35 Identities=11% Similarity=-0.051 Sum_probs=25.5
Q ss_pred ceeEEEEccc-------cc----hhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSD-------LN----NITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~-------~~----~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++..- .. .+....+.+.+.+.++.||.+++
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEE
Confidence 4799987521 11 24456778888889999999998
No 198
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=40.44 E-value=19 Score=27.59 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=29.7
Q ss_pred ceeEEEEccccc-----hhhHHHHHHHHHHHHhcCCeEEEcCCchHH
Q psy9123 22 SKIAVLLHSDLN-----NITCDEKWMRDIKNQNESGSVLVPCYPSGV 63 (118)
Q Consensus 22 ~~~~~~~~~~~~-----~~~~~eL~~~I~~Tl~~GG~VLIPaFavGR 63 (118)
.+||+.+..--. ....+.+.+.+.+.++.||.+++-+.....
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 479998754221 123468889999999999999986655443
No 199
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=40.20 E-value=20 Score=24.54 Aligned_cols=39 Identities=10% Similarity=0.029 Sum_probs=27.1
Q ss_pred ceeEEEEccccc-----------hhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLHSDLN-----------NITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~~~~~-----------~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.+||+++..--. .+...++.+.+.+.++.||.+++-.++
T Consensus 92 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 92 CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 589998754211 123345778888899999999987654
No 200
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=40.02 E-value=39 Score=25.76 Aligned_cols=87 Identities=9% Similarity=-0.016 Sum_probs=47.5
Q ss_pred CceeEEEEcccc----ch--hhH--HHHHHHHHHHHhcCC--eEEEcCCchHHHH---HHHHHHHHHhhcCCC-C-----
Q psy9123 21 QSKIAVLLHSDL----NN--ITC--DEKWMRDIKNQNESG--SVLVPCYPSGVIY---DLFECLSSHLDNSSL-T----- 81 (118)
Q Consensus 21 ~~~~~~~~~~~~----~~--~~~--~eL~~~I~~Tl~~GG--~VLIPaFavGRtq---ELL~~L~~l~~~~~L-p----- 81 (118)
..+||+++..-- .. +.. .++.+.+.+.++.|| .+++-.|. .... +++..+.+.+....+ |
T Consensus 146 ~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~-~~~~~~~~~l~~l~~~f~~v~v~P~~sR~ 224 (276)
T 2wa2_A 146 PFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN-PYSCDVLEALMKMQARFGGGLIRVPLSRN 224 (276)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC-CCSHHHHHHHHHHHHHHCCEEECCTTSCT
T ss_pred CCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC-CCchhHHHHHHHHHHHcCCEEEEcCCCCC
Confidence 457999876311 10 111 125677888899999 99986665 3333 666666665544322 1
Q ss_pred -CCCEEEeChhHH----HHHHHHHHHHhhhhH
Q psy9123 82 -QIPMFFISPVAD----ISLAYSNILAEWNTK 108 (118)
Q Consensus 82 -~iPIyldSPmA~----~al~~~~~~~Ewl~~ 108 (118)
.--+|+..--.. .+..+.+...++|.+
T Consensus 225 ~s~E~y~v~~~~~~~~~~~~~~~~~l~~r~~~ 256 (276)
T 2wa2_A 225 STHEMYFVSGIKNNIMGNVTAVSRQLLKRMEE 256 (276)
T ss_dssp TCCCEEEESSCCCCHHHHHHHHHHHHHHHHCC
T ss_pred cchheEEecccCCCcchhHHHHHHHHHHHhhc
Confidence 245676654332 333334445555543
No 201
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=40.01 E-value=23 Score=26.50 Aligned_cols=41 Identities=7% Similarity=-0.123 Sum_probs=30.6
Q ss_pred ceeEEEEccccc----h--hhHHHHHHHHHHHHhcCCeEEEcCCchH
Q psy9123 22 SKIAVLLHSDLN----N--ITCDEKWMRDIKNQNESGSVLVPCYPSG 62 (118)
Q Consensus 22 ~~~~~~~~~~~~----~--~~~~eL~~~I~~Tl~~GG~VLIPaFavG 62 (118)
.+||+++.+... + .....+...+.+.++.||.+++-++...
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 479999987654 2 2245777888889999999998776653
No 202
>3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus}
Probab=39.80 E-value=9.7 Score=25.96 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=29.8
Q ss_pred cCCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchH---------HHHHHHHHHHHHh
Q psy9123 18 SNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSG---------VIYDLFECLSSHL 75 (118)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavG---------RtqELL~~L~~l~ 75 (118)
.-|+..|.|++..+......+++.+.+.+.+..+|.-+-..+++| -..+|+...+..+
T Consensus 82 R~~~d~F~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~siGi~~~~~~~~~~~~ll~~A~~Al 148 (178)
T 3mtk_A 82 KIGFDRFAIICKSENISDFIERMLSQLLLPYNVNGNLIRVNFNIGAAQIENSNEAAANLMRRCDLAL 148 (178)
T ss_dssp EEETTEEEEEEECSSHHHHHHHHHHHHTSCEEETTEEECCCEEEEEEECC----CHHHHHHHHHHHH
T ss_pred EecCCEEEEEecCccHHHHHHHHHHHhcCCEEECCEEEEEEEEEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 346889999887643333333444444433344555444444444 2455665554433
No 203
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=39.69 E-value=5.9 Score=28.04 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=26.9
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.+||+++........ .+.+.+.++.||.++++..+
T Consensus 161 ~~fD~I~~~~~~~~~----~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGASASEL----PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECSBBSSC----CHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECCchHHH----HHHHHHhcCCCcEEEEEEcc
Confidence 469999877665543 45567789999999999876
No 204
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=39.22 E-value=22 Score=26.58 Aligned_cols=38 Identities=3% Similarity=0.045 Sum_probs=28.6
Q ss_pred CceeEEEEccccchhh-HHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNIT-CDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~-~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++..+...-. ..++.+.+.+.++.||.++|-.
T Consensus 183 ~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 183 KGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 4589999876543221 6778888899999999999854
No 205
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=38.66 E-value=50 Score=22.69 Aligned_cols=36 Identities=8% Similarity=-0.105 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCc-hHHH--HHHHHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYP-SGVI--YDLFECLS 72 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFa-vGRt--qELL~~L~ 72 (118)
.++..+.|.+.+++||+|+|=|.+ +||. .-+.|++.
T Consensus 73 ~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~ 111 (161)
T 3emu_A 73 IPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMY 111 (161)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHH
Confidence 456677888888999999999987 4784 44455554
No 206
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=38.57 E-value=19 Score=27.40 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=26.2
Q ss_pred eeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 23 KIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 23 ~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
+||+.+.+... .+...++.+.+.+.++.||.++|=
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 49998876544 333457888888999999999873
No 207
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=38.48 E-value=22 Score=27.17 Aligned_cols=36 Identities=17% Similarity=0.047 Sum_probs=27.1
Q ss_pred eeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 23 KIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 23 ~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
+||+++.+... .....++.+.+.+.++.||.++|=.
T Consensus 248 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 248 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 39998876543 3344578888899999999998743
No 208
>1t3g_A X-linked interleukin-1 receptor accessory protein-like 1; TIR, IL-1RAPL, IL-1R, TLR, membrane protein; 2.30A {Homo sapiens}
Probab=38.41 E-value=43 Score=23.59 Aligned_cols=41 Identities=12% Similarity=-0.154 Sum_probs=30.0
Q ss_pred CCceeEEEEccccch----hhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 20 GQSKIAVLLHSDLNN----ITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~----~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.+|+.-|+|.|.-.- -...|+..++.+.+..+|..+||++-
T Consensus 66 ~~Sr~~IvVlS~~y~~~S~wc~~El~~a~~~~~~~~~~~vI~I~~ 110 (159)
T 1t3g_A 66 DQSKRLIIVMTPNYVVRRGWSIFELETRLRNMLVTGEIKVILIEC 110 (159)
T ss_dssp HTBSEEEEEECHHHHHTTTTHHHHHSHHHHHHHHTTSSEEEEEEC
T ss_pred HHcCEEEEEEccchhhcChHHHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 467888888875432 23567888888888888888899874
No 209
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=38.14 E-value=18 Score=29.97 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=25.5
Q ss_pred ceeEEEEccc-cchhhHHHHHHHHHHHHhcCCeEEEc
Q psy9123 22 SKIAVLLHSD-LNNITCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 22 ~~~~~~~~~~-~~~~~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
.+||++++.. +......+....+.+.++.||.++++
T Consensus 322 ~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 322 PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred CCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 4699988752 33233444456777889999999998
No 210
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=38.13 E-value=4.5 Score=28.63 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=28.3
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGV 63 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGR 63 (118)
.+||+++........ .+.+.+.++.||.++++..+.+.
T Consensus 150 ~~fD~i~~~~~~~~~----~~~~~~~LkpgG~lv~~~~~~~~ 187 (226)
T 1i1n_A 150 APYDAIHVGAAAPVV----PQALIDQLKPGGRLILPVGPAGG 187 (226)
T ss_dssp CCEEEEEECSBBSSC----CHHHHHTEEEEEEEEEEESCTTS
T ss_pred CCcCEEEECCchHHH----HHHHHHhcCCCcEEEEEEecCCC
Confidence 469998876655433 34567789999999999887654
No 211
>2iie_A Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=38.08 E-value=19 Score=26.95 Aligned_cols=44 Identities=9% Similarity=-0.005 Sum_probs=29.8
Q ss_pred hHHHHhhcccCCCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 9 DSLIASTASSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..||..-+...|-||-|+ ...++.|.+.|.++|.+|+.|-||=|
T Consensus 50 ~eLi~~ia~~~~lsk~da-------~~vl~~l~~~i~~~L~~G~~V~L~Gf 93 (204)
T 2iie_A 50 AEMSEYLFDKLGLSKRDA-------KELVELFFEEIRRALENGEQVKLSGF 93 (204)
T ss_dssp HHHHHHHHHHHCCCHHHH-------HHHHHHHHHHHHHHHHTTCEEEETTT
T ss_pred HHHHHHHHHHcCCCHHHH-------HHHHHHHHHHHHHHHhCCCeEEecCC
Confidence 344444444444444332 45678899999999999999988864
No 212
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=38.03 E-value=18 Score=28.09 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=26.9
Q ss_pred eeEEEEcccc----chhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 23 KIAVLLHSDL----NNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 23 ~~~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
+||+.+.+.. .++...++.+.+.+.++.||.++|
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6999877654 344455788889999999999998
No 213
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=37.71 E-value=13 Score=24.92 Aligned_cols=39 Identities=3% Similarity=-0.060 Sum_probs=23.3
Q ss_pred ceeEEEEcccc-chhhHHHHHHHH--HHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLHSDL-NNITCDEKWMRD--IKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~~~~-~~~~~~eL~~~I--~~Tl~~GG~VLIPaFa 60 (118)
.+||+++...- .....++..+.+ .+.++.||.+++-+..
T Consensus 115 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 115 LQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 47998886433 122334444455 4558999999875433
No 214
>1hru_A YRDC gene product; protein folding, structural genomics, RNA, SUA5, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Escherichia coli} SCOP: d.115.1.1
Probab=37.27 E-value=30 Score=25.08 Aligned_cols=24 Identities=17% Similarity=0.133 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
.+..+.+.+.+++||.|.+|+..+
T Consensus 7 ~~~i~~a~~~L~~G~iva~ptdt~ 30 (188)
T 1hru_A 7 RDAIAAAIDVLNEERVIAYPTEAV 30 (188)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSS
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCE
Confidence 444566777899999999998653
No 215
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=36.96 E-value=15 Score=26.10 Aligned_cols=38 Identities=8% Similarity=0.001 Sum_probs=27.8
Q ss_pred CceeEEEEccccchh-hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI-TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~-~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++....... ..+++.+.+.+.++.||.++|-.
T Consensus 112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 458999986543322 24667788888999999999854
No 216
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=36.54 E-value=93 Score=20.66 Aligned_cols=56 Identities=20% Similarity=0.168 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhc-CCeEEEcCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHHHH
Q psy9123 38 DEKWMRDIKNQNE-SGSVLVPCYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPVADIS 95 (118)
Q Consensus 38 ~eL~~~I~~Tl~~-GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~~a 95 (118)
+.+.+.+.+.++. ||.|+++.....+. ....+.+.+.+.+.+-.-||++.|.....
T Consensus 63 ~~~~~~i~~~l~~~g~~vi~d~~~~~~~--~~~~~~~~l~~~~~~~~~i~l~~~~e~~~ 119 (183)
T 2vli_A 63 PLMLDALQYASREAAGPLIVPVSISDTA--RHRRLMSGLKDRGLSVHHFTLIAPLNVVL 119 (183)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECCCCHH--HHHHHHHHHHHTTCCCEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHhCCCcEEEeeeccCHH--HHHHHHHHHHhcCCceEEEEEeCCHHHHH
Confidence 3345566666766 77788885544331 22222233333222212289999876655
No 217
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=36.52 E-value=19 Score=27.64 Aligned_cols=35 Identities=9% Similarity=0.179 Sum_probs=28.7
Q ss_pred ceeEEEEcccc----chhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDL----NNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++.... .++..+++.+.+.+.++.||.+++
T Consensus 212 ~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 212 GPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 57999998664 345567888899999999999988
No 218
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=36.10 E-value=43 Score=22.13 Aligned_cols=53 Identities=6% Similarity=-0.049 Sum_probs=31.2
Q ss_pred HHHHHHHHH---hcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHHH
Q psy9123 40 KWMRDIKNQ---NESGSVLVPCYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPVADI 94 (118)
Q Consensus 40 L~~~I~~Tl---~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~~ 94 (118)
+.+.+.+.+ +.|+.|++-.+..++.+ ...+.+.....+.+..-||++-|...-
T Consensus 64 ~~~~~~~~l~~~~~g~~vi~d~~~~~~~~--~~~l~~~~~~~~~~~~~i~l~~~~~~~ 119 (181)
T 1ly1_A 64 QFDTAKSILYGGDSVKGVIISDTNLNPER--RLAWETFAKEYGWKVEHKVFDVPWTEL 119 (181)
T ss_dssp HHHHHHHHHTSCSSCCEEEECSCCCSHHH--HHHHHHHHHHHTCEEEEEECCCCHHHH
T ss_pred HHHHHHHHHhhccCCCeEEEeCCCCCHHH--HHHHHHHHHHcCCCEEEEEEeCCHHHH
Confidence 445667777 88999999888776543 222333333323333457777765543
No 219
>2j67_A TOLL like receptor 10; TIR, IL-1, TLR10, membrane, innate immunity, immune response, leucine-rich repeat, glycoprotein, transmembrane; 2.20A {Homo sapiens} PDB: 1fyv_A
Probab=36.02 E-value=8.8 Score=27.92 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=26.7
Q ss_pred CCCCchhHHHHhhcccCCCceeEEEEccccchhh---HHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 3 QNGDNLDSLIASTASSNGQSKIAVLLHSDLNNIT---CDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..|+++..-|.... .+|+.-|+|.|.-...+ ..|+..+..+.++.++..+||+|
T Consensus 75 ~~G~~i~~~i~~aI---~~Sr~~IvVlS~~yl~S~wc~~El~~a~~~~~~~~~~~vIpV~ 131 (178)
T 2j67_A 75 DPGKSISENIVSFI---EKSYKSIFVLSPNFVQNEWCHYEFYFAHHNLFHENSDHIILIL 131 (178)
T ss_dssp CTTSCHHHHHHHHH---HTEEEEEEEECHHHHHHTGGGTHHHHTTCC-------CEEEEE
T ss_pred CCCccHHHHHHHHH---HhCCEEEEEecccccccchHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 45655543333222 36788888877644332 34666666566666777778876
No 220
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=35.95 E-value=26 Score=25.14 Aligned_cols=35 Identities=6% Similarity=0.041 Sum_probs=26.2
Q ss_pred ceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEE
Q psy9123 22 SKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 22 ~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLI 56 (118)
.+||+++......- ...++...+.+.++.||.++|
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEE
Confidence 57999987754421 135677788899999999998
No 221
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=35.51 E-value=23 Score=27.45 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=25.7
Q ss_pred ceeEEEEccc-----cchhhHHHHHHHHHHHHhcCCeEE
Q psy9123 22 SKIAVLLHSD-----LNNITCDEKWMRDIKNQNESGSVL 55 (118)
Q Consensus 22 ~~~~~~~~~~-----~~~~~~~eL~~~I~~Tl~~GG~VL 55 (118)
.+||+++... ..+...+++...+.+.++.||.++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 5899998654 234456778888899999999875
No 222
>1x52_A Pelota homolog, CGI-17; ERF1_3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.79.3.2
Probab=35.16 E-value=42 Score=23.12 Aligned_cols=38 Identities=21% Similarity=-0.012 Sum_probs=26.3
Q ss_pred ceeEEEEccccchh-----hHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 22 SKIAVLLHSDLNNI-----TCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 22 ~~~~~~~~~~~~~~-----~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
.-++.||++|-.-. ....+.+.+..+-+.||+|.|=+.
T Consensus 53 GAVetLLI~d~l~r~~d~~~~~~~~el~e~~~~~G~~V~ivs~ 95 (124)
T 1x52_A 53 MAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSS 95 (124)
T ss_dssp TCEEEEEEEHHHHTCSSHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCccEEEechhhhcCCChHHHHHHHHHHHHHHHcCCEEEEECC
Confidence 34788888875322 345677777778889999887543
No 223
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=35.10 E-value=33 Score=22.71 Aligned_cols=33 Identities=15% Similarity=-0.108 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHHhcCCeEEEcCCc-hHHHHHH
Q psy9123 35 ITCDEKWMRDIKNQNESGSVLVPCYP-SGVIYDL 67 (118)
Q Consensus 35 ~~~~eL~~~I~~Tl~~GG~VLIPaFa-vGRtqEL 67 (118)
+..++..+.|.+..++||.|+|=|.+ .||+=-+
T Consensus 65 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~ 98 (144)
T 3ezz_A 65 SWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATI 98 (144)
T ss_dssp TTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHH
Confidence 44678888999999999999999988 4785433
No 224
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=34.76 E-value=62 Score=24.05 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhcCCeEEEc-------CCc-hHH--HHHHHHHHHHHhhcCCCCCCCEEEeChhH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVP-------CYP-SGV--IYDLFECLSSHLDNSSLTQIPMFFISPVA 92 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIP-------aFa-vGR--tqELL~~L~~l~~~~~Lp~iPIyldSPmA 92 (118)
.+.+.+.|..++++|..||.= +|. .+| -.+.+..|++....+..|++=||+|-|..
T Consensus 98 ~~~~~~~i~p~l~~g~~VI~DRy~~S~~ayq~~~~gl~~~~~~~l~~~~~~~~~PDl~I~Ldv~~e 163 (227)
T 3v9p_A 98 REHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLEALERWVQGGFQPDLTVLFDVPPQ 163 (227)
T ss_dssp HHHHHHTHHHHHHTTCEEEEECCHHHHHHHHTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCSS
T ss_pred HHHHHHHHHHHHHcCCEEEEeccHhHHHHHhhhccCCCHHHHHHHHHHHhcCCCCCEEEEEeCCHH
Confidence 344556677788888777764 222 223 34667777776655666889999998754
No 225
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=34.66 E-value=23 Score=25.61 Aligned_cols=38 Identities=8% Similarity=-0.005 Sum_probs=27.8
Q ss_pred CceeEEEEccccchh-hHHHHHHHHHHHHhcCCeEEEcC
Q psy9123 21 QSKIAVLLHSDLNNI-TCDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~-~~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
..+||+++......- ...++.+.+.+.++.||.++|=.
T Consensus 112 ~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 112 NEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence 458999987654332 24567778888999999999843
No 226
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=34.64 E-value=26 Score=25.91 Aligned_cols=50 Identities=8% Similarity=-0.148 Sum_probs=34.0
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCC--chHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCY--PSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaF--avGRtqELL~~L~~ 73 (118)
.+||+++..... ....+.+.+.+.++.||.+++..- +...+.++...+..
T Consensus 150 ~~fD~I~s~a~~--~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~ 201 (249)
T 3g89_A 150 EAYARAVARAVA--PLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALER 201 (249)
T ss_dssp TCEEEEEEESSC--CHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHH
T ss_pred CCceEEEECCcC--CHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHH
Confidence 589999875432 347788888889999999887542 34445555544443
No 227
>1cqm_A Ribosomal protein S6; alzheimer disease, oligomerization; 1.65A {Thermus thermophilus} SCOP: d.58.14.1 PDB: 1cqn_A 1qjh_A 1ris_A 1fka_F 1gix_I* 1hnw_F* 1hnx_F* 1hnz_F* 1hr0_F 1i94_F* 1i95_F* 1i96_F* 1i97_F* 1ibk_F* 1ibl_F* 1ibm_F 1j5e_F 1jgo_I* 1jgp_I* 1jgq_I* ...
Probab=34.49 E-value=56 Score=21.46 Aligned_cols=35 Identities=9% Similarity=0.019 Sum_probs=25.5
Q ss_pred EEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 26 VLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 26 ~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
+++..|+.++.++++.+-+...+.++|-.+.=...
T Consensus 8 ~Il~p~l~~e~~~~~~~~~~~~i~~~gg~i~~~e~ 42 (101)
T 1cqm_A 8 IVLNPNLDQSQLALEKEIIQRALENYGARVEKVAI 42 (101)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEe
Confidence 57788888999999999999888655544443333
No 228
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=34.31 E-value=40 Score=25.74 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=26.0
Q ss_pred eeEEEEccccc----hhhHHHHHHHHHHHHhc---CCeEEE
Q psy9123 23 KIAVLLHSDLN----NITCDEKWMRDIKNQNE---SGSVLV 56 (118)
Q Consensus 23 ~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~---GG~VLI 56 (118)
+||+++.+... +..+.++.+.+.+.++. ||.++|
T Consensus 246 ~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i 286 (352)
T 1fp2_A 246 NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTI 286 (352)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEE
T ss_pred CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 38988876543 33445788889999999 999887
No 229
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=33.98 E-value=99 Score=20.35 Aligned_cols=36 Identities=8% Similarity=-0.009 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH--HHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL--FECLS 72 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL--L~~L~ 72 (118)
.++..+.|.+..+.||.|+|=|.+- ||+=-+ .|++.
T Consensus 67 ~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~ 105 (145)
T 2nt2_A 67 WNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMK 105 (145)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHHHHHHH
Confidence 4567788888889999999999987 997544 45553
No 230
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=33.62 E-value=36 Score=26.10 Aligned_cols=34 Identities=9% Similarity=0.050 Sum_probs=26.4
Q ss_pred eeEEEEccccc----hhhHHHHHHHHHHHHhc---CCeEEE
Q psy9123 23 KIAVLLHSDLN----NITCDEKWMRDIKNQNE---SGSVLV 56 (118)
Q Consensus 23 ~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~---GG~VLI 56 (118)
++|+.+.+... +..+.++.+.+.+.++. ||.++|
T Consensus 251 ~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i 291 (358)
T 1zg3_A 251 SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVII 291 (358)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEE
T ss_pred CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 48988877543 33455788888999999 999998
No 231
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=33.23 E-value=29 Score=26.80 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=25.9
Q ss_pred eEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 24 IAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 24 ~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
+|+.+.+... +....++.+.+.+.++.||.++|
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i 304 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVII 304 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 8998877653 33345788889999999999987
No 232
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=33.14 E-value=28 Score=26.99 Aligned_cols=40 Identities=13% Similarity=0.035 Sum_probs=26.4
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
=+++||+|...-...--++-.+.+.+-+++||-++.=-.+
T Consensus 56 L~~~D~vV~~~~~~~l~~~~~~~l~~yV~~Ggglv~~H~a 95 (281)
T 4e5v_A 56 FSPYQLVVLDYNGDSWPEETNRRFLEYVQNGGGVVIYHAA 95 (281)
T ss_dssp CTTCSEEEECCCSSCCCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred hhcCCEEEEeCCCCcCCHHHHHHHHHHHHcCCCEEEEecc
Confidence 4689999976533332355667778888888877664443
No 233
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=33.13 E-value=46 Score=22.62 Aligned_cols=50 Identities=8% Similarity=0.067 Sum_probs=30.4
Q ss_pred ceeEEEEccccch------------hhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNN------------ITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSS 73 (118)
Q Consensus 22 ~~~~~~~~~~~~~------------~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~ 73 (118)
.+||+++.....- +..+ +...+.+.+ .||.+++-........++...+.+
T Consensus 77 ~~fD~i~~n~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~ 138 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDPIIGGGYLGRE-VIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEE 138 (170)
T ss_dssp GGCSEEEECCCCBTTCCCTTTBCCGGGCH-HHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHH
T ss_pred CCCCEEEECCCCccCCccccccCCcchHH-HHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHH
Confidence 5799888743221 1222 333333444 999999977666667777666654
No 234
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=32.83 E-value=44 Score=25.49 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=26.8
Q ss_pred ceeEEEEccccc----hhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLHSDLN----NITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~~~~~----~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.+||+++.+... .+...+....+.+.+ .||.+++.+..
T Consensus 109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 479998887643 233455666777788 99999987543
No 235
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=32.72 E-value=26 Score=28.40 Aligned_cols=62 Identities=13% Similarity=0.123 Sum_probs=40.5
Q ss_pred cccchhhHHHHHHHHHHHHhcCCeEEEcCCchHH----------HHH-HHHHHHHHhhcCCCC-------CCCEEEeChh
Q psy9123 30 SDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGV----------IYD-LFECLSSHLDNSSLT-------QIPMFFISPV 91 (118)
Q Consensus 30 ~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGR----------tqE-LL~~L~~l~~~~~Lp-------~iPIyldSPm 91 (118)
.+|.+.-...+.+...+.++.||.+++-...-|- +.+ |-..+.++..+|-+. .+|+|+-|+-
T Consensus 181 ~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~ 260 (359)
T 1m6e_X 181 YKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPT 260 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHH
Confidence 3455566778899999999999999886553221 233 333444455555432 4899998873
No 236
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=32.64 E-value=1.6e+02 Score=22.34 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=18.6
Q ss_pred HHHHHHHhcCCeEEEcCCchHH--HHHHHHHHHHHhh
Q psy9123 42 MRDIKNQNESGSVLVPCYPSGV--IYDLFECLSSHLD 76 (118)
Q Consensus 42 ~~I~~Tl~~GG~VLIPaFavGR--tqELL~~L~~l~~ 76 (118)
+.+.+.-++.|.++-|-|+.|- +++|+....+++.
T Consensus 112 ~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~ 148 (273)
T 1dih_A 112 QAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMG 148 (273)
T ss_dssp HHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcC
Confidence 3444444555666666666665 4455555555553
No 237
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=32.44 E-value=78 Score=22.68 Aligned_cols=33 Identities=6% Similarity=-0.107 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 35 ITCDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 35 ~~~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
+...+..+.|.+.+++||+|+|=|.+- ||.=-+
T Consensus 101 ~~~~~~~~fI~~~~~~g~~VLVHC~~G~sRS~tv 134 (182)
T 2j16_A 101 LDLPSLTSIIHAATTKREKILIHAQCGLSRSATL 134 (182)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCeEEEECCCCCChHHHH
Confidence 346778888999999999999999875 885544
No 238
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=32.34 E-value=47 Score=24.68 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=34.2
Q ss_pred EEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHH
Q psy9123 26 VLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLS 72 (118)
Q Consensus 26 ~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~ 72 (118)
++=|.+- ..+.++|.+.+.+.+.++|.+ |..++.+.+.|+..+.
T Consensus 9 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~~ 52 (305)
T 3ocj_A 9 LISHRAA-SADLAGMVRQARQRILLQGNV--PGFDVARQIELLHGLA 52 (305)
T ss_dssp --CCSCH-HHHHHHHHHHHHHHHHHHCCB--TTBCHHHHHHHHHHHH
T ss_pred ccccCCC-cccHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHH
Confidence 3444443 678889999999999888874 8889999999988775
No 239
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=32.07 E-value=33 Score=24.07 Aligned_cols=43 Identities=7% Similarity=-0.081 Sum_probs=26.9
Q ss_pred CceeEEEEcccc-chhhHHHHHHHHHHH--HhcCCeEEEcCCchHH
Q psy9123 21 QSKIAVLLHSDL-NNITCDEKWMRDIKN--QNESGSVLVPCYPSGV 63 (118)
Q Consensus 21 ~~~~~~~~~~~~-~~~~~~eL~~~I~~T--l~~GG~VLIPaFavGR 63 (118)
..+||+++...- ......++.+.+.+. ++.||.+++-+.+...
T Consensus 120 ~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 120 GTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp CCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred CCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 347998876432 123344555555554 8999999987766443
No 240
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=32.03 E-value=38 Score=24.49 Aligned_cols=38 Identities=3% Similarity=0.093 Sum_probs=27.3
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..+||+++....... ...++.+.+.+.++ ||.++|=.+
T Consensus 92 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 92 DKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp TTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 357999988765432 24577788889999 998877444
No 241
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=31.95 E-value=54 Score=26.31 Aligned_cols=38 Identities=18% Similarity=0.233 Sum_probs=25.9
Q ss_pred EEEEccccc---hhhHHHHHHHHHHHHhcCC----eEEEcCCchHH
Q psy9123 25 AVLLHSDLN---NITCDEKWMRDIKNQNESG----SVLVPCYPSGV 63 (118)
Q Consensus 25 ~~~~~~~~~---~~~~~eL~~~I~~Tl~~GG----~VLIPaFavGR 63 (118)
||.+..... ++..-||+ .+.+++++.| +++||.|+-.|
T Consensus 52 dV~iiqs~~~p~nd~lmeLl-~~idA~k~asA~rIt~ViPY~~YaR 96 (326)
T 3s5j_B 52 DVYIVQSGCGEINDNLMELL-IMINACKIASASRVTAVIPCFPYAR 96 (326)
T ss_dssp EEEEECCCCSCHHHHHHHHH-HHHHHHHHTTCSEEEEEESSCTTTT
T ss_pred cEEEEecCCCCccHHHHHHH-HHHHHHHhcCCcEEEEeccCccccc
Confidence 666655443 34455655 4445888887 79999999876
No 242
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=31.86 E-value=64 Score=20.95 Aligned_cols=34 Identities=15% Similarity=-0.028 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHHHhcCCeEEEcCCc-hHHHHHHH
Q psy9123 35 ITCDEKWMRDIKNQNESGSVLVPCYP-SGVIYDLF 68 (118)
Q Consensus 35 ~~~~eL~~~I~~Tl~~GG~VLIPaFa-vGRtqELL 68 (118)
+...++.+.|.+.+++||.|+|=|.+ .||+=-++
T Consensus 73 ~~~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg~~~ 107 (151)
T 2img_A 73 DQIDRFVQIVDEANARGEAVGVHCALGFGRTGTML 107 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCCCCChHHHHH
Confidence 44667888888888899999999987 47865544
No 243
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=31.83 E-value=31 Score=26.96 Aligned_cols=37 Identities=5% Similarity=-0.122 Sum_probs=28.8
Q ss_pred ceeEEEEccccchhh--HHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNNIT--CDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~--~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++.....+-. ..++.+.+.+.++.||.++|=.
T Consensus 170 ~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 170 GPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp CCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 579999987764332 4677888899999999999843
No 244
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=31.65 E-value=47 Score=21.84 Aligned_cols=45 Identities=13% Similarity=0.114 Sum_probs=24.3
Q ss_pred cCCCceeEEEEccccchhhHHHHHHHHHHHH----hcCCeEEEcCCchH
Q psy9123 18 SNGQSKIAVLLHSDLNNITCDEKWMRDIKNQ----NESGSVLVPCYPSG 62 (118)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl----~~GG~VLIPaFavG 62 (118)
.-|+..|.|++...-..+..+.+++.+.+.+ .-+|.-+-..+++|
T Consensus 76 R~~~d~F~ill~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~siG 124 (171)
T 3icl_A 76 RIGGDKFTILLNGAKDTLNGALVAQKILDGLAQPFVFGAQQIVISVSIG 124 (171)
T ss_dssp EETTTEEEEEESSCTTSTTTHHHHHHHHHHHTSCEEETTEEECCCEEEE
T ss_pred EecCCEEEEEecCCCChHHHHHHHHHHHHHhhCCEEECCEEEEEEEEEE
Confidence 3478899999865333333344444444444 33555444444444
No 245
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=31.64 E-value=95 Score=20.95 Aligned_cols=32 Identities=16% Similarity=0.123 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
...+..+.|.+.++.||.|+|=|.+- ||+=-+
T Consensus 74 ~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 106 (164)
T 2hcm_A 74 HLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAV 106 (164)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCCchHHHH
Confidence 34667778888889999999999987 997655
No 246
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=31.60 E-value=11 Score=26.22 Aligned_cols=36 Identities=8% Similarity=0.139 Sum_probs=26.4
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
..+||+++...-.....+ .+.+.++.||.++++.-.
T Consensus 141 ~~~~D~i~~~~~~~~~~~----~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPT----ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCT----HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhH----HHHHhcccCcEEEEEEcC
Confidence 357999988754443333 466789999999998876
No 247
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=31.49 E-value=81 Score=20.55 Aligned_cols=36 Identities=14% Similarity=-0.005 Sum_probs=27.7
Q ss_pred hhhHHHHHHHHHHHHhcCCeEEEcCCch-HHHHHHHH
Q psy9123 34 NITCDEKWMRDIKNQNESGSVLVPCYPS-GVIYDLFE 69 (118)
Q Consensus 34 ~~~~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqELL~ 69 (118)
.+...++.+.|.+.+++||.|+|=|.+- ||+=-++-
T Consensus 71 ~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~~a 107 (150)
T 4erc_A 71 PDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA 107 (150)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
Confidence 4456788888988899999999999774 78754433
No 248
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=30.83 E-value=28 Score=26.70 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=25.8
Q ss_pred ceeEEEEccc-----cchhhHHHHHHHHHHHHhcCCeEE
Q psy9123 22 SKIAVLLHSD-----LNNITCDEKWMRDIKNQNESGSVL 55 (118)
Q Consensus 22 ~~~~~~~~~~-----~~~~~~~eL~~~I~~Tl~~GG~VL 55 (118)
.+||+++..- ..+...+.+...+.+.++.||.++
T Consensus 104 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred CcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 5899998642 244556778888889999999875
No 249
>2kjw_A TS9, 30S ribosomal protein S6; S6 permutant, solution structure, backbone dynamics, folding, ribonucleoprotein, RNA-binding, rRNA-binding; NMR {Thermus thermophilus}
Probab=30.74 E-value=41 Score=22.51 Aligned_cols=29 Identities=10% Similarity=0.089 Sum_probs=23.1
Q ss_pred EEEccccchhhHHHHHHHHHHHHhc-CCeE
Q psy9123 26 VLLHSDLNNITCDEKWMRDIKNQNE-SGSV 54 (118)
Q Consensus 26 ~~~~~~~~~~~~~eL~~~I~~Tl~~-GG~V 54 (118)
+++..|+.++..+.+.+-+...+.+ ||.|
T Consensus 50 ~Il~P~l~ee~~~~~ve~~~~iI~~~gG~i 79 (96)
T 2kjw_A 50 IVLNPNLDQSQLALEKEIIQRALENYGARV 79 (96)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred eeeCCCCCHHHHHHHHHHHHHHHHhCCCEE
Confidence 5677888899999999999988755 6654
No 250
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=30.71 E-value=16 Score=25.46 Aligned_cols=36 Identities=11% Similarity=0.108 Sum_probs=27.1
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
.+||+++......... +.+.+.++.||.+++++.+.
T Consensus 145 ~~fD~v~~~~~~~~~~----~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIP----EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CCEEEEEESSBBSSCC----HHHHHTEEEEEEEEEEESSS
T ss_pred CCeeEEEECCchHHHH----HHHHHHcCCCcEEEEEECCC
Confidence 4699998876655433 35677899999999987654
No 251
>1rr7_A Middle operon regulator; MOR, transcription; 2.20A {Enterobacteria phage MU} SCOP: a.4.1.14
Probab=30.69 E-value=76 Score=21.90 Aligned_cols=42 Identities=12% Similarity=-0.039 Sum_probs=31.1
Q ss_pred cchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCC
Q psy9123 32 LNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSS 79 (118)
Q Consensus 32 ~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~ 79 (118)
..++.+.+|+++|...+.+.| ||. ..+.+++..|.++|.-..
T Consensus 27 ~~Pe~L~el~~~ig~~L~~~G---i~~---~~~ie~~~~L~~~~gG~~ 68 (129)
T 1rr7_A 27 RFPALLAELNDLLRGELSRLG---VDP---AHSLEIVVAICKHLGGGQ 68 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHTS---SCT---TSHHHHHHHHHHHHCSSC
T ss_pred HhHHHHHHHHHHHHHHHHHcC---CCH---HHHHHHHHHHHHHHCCee
Confidence 345778999999999887788 565 233388888888886543
No 252
>2j5a_A 30S ribosomal protein S6; ribonucleoprotein, RIBO protein S6, RNA-binding, rRNA-binding, protein folding; 2.3A {Aquifex aeolicus} SCOP: d.58.14.1
Probab=30.68 E-value=39 Score=22.72 Aligned_cols=38 Identities=11% Similarity=0.083 Sum_probs=27.9
Q ss_pred EEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchH
Q psy9123 25 AVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSG 62 (118)
Q Consensus 25 ~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavG 62 (118)
-+++..|+.++.+.++.+-+...+.++|-.+.=...-|
T Consensus 13 ~~Il~p~l~~e~~~~~v~~~~~~i~~~Gg~i~~~e~wG 50 (110)
T 2j5a_A 13 VFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWG 50 (110)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 35677888888889999999999877666555544444
No 253
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=30.63 E-value=60 Score=25.84 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=25.3
Q ss_pred EEEEcccc-c--hhhHHHHHHHHHHHHhcCC----eEEEcCCchHH
Q psy9123 25 AVLLHSDL-N--NITCDEKWMRDIKNQNESG----SVLVPCYPSGV 63 (118)
Q Consensus 25 ~~~~~~~~-~--~~~~~eL~~~I~~Tl~~GG----~VLIPaFavGR 63 (118)
||.+..+. . ++..-||+ .+.+++++.| +++||.|+-.|
T Consensus 56 dV~iiqs~~~p~nd~lmeLl-~~idA~k~asA~rIt~ViPY~~YaR 100 (319)
T 3dah_A 56 DVFVLQSTCAPTNDNLMELM-IMVDALKRASAGRITAAIPYFGYAR 100 (319)
T ss_dssp EEEEECCCCSSHHHHHHHHH-HHHHHHHHTTBSEEEEEESSCTTTT
T ss_pred eEEEEccCCCCCcHHHHHHH-HHHHHHHHcCCcEEEEEccCccccc
Confidence 66655433 2 44555666 4556788887 89999998654
No 254
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=30.56 E-value=49 Score=25.76 Aligned_cols=55 Identities=15% Similarity=-0.034 Sum_probs=32.6
Q ss_pred ceeEEEEccccc-------------hhhHHHHHHHHHHHHhcCCeEEEcCCchHH--HHHHHHHHHHHhhc
Q psy9123 22 SKIAVLLHSDLN-------------NITCDEKWMRDIKNQNESGSVLVPCYPSGV--IYDLFECLSSHLDN 77 (118)
Q Consensus 22 ~~~~~~~~~~~~-------------~~~~~eL~~~I~~Tl~~GG~VLIPaFavGR--tqELL~~L~~l~~~ 77 (118)
.+||+++. |.+ .+...++.+.+.+.++.||.+++-+..... ..++...+.+...+
T Consensus 224 ~~fD~Ii~-dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~ 293 (332)
T 2igt_A 224 STYDIILT-DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRG 293 (332)
T ss_dssp CCBSEEEE-CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTT
T ss_pred CCceEEEE-CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 47998876 222 223456777777889999997775433322 33445555555443
No 255
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=30.26 E-value=46 Score=26.10 Aligned_cols=43 Identities=16% Similarity=0.184 Sum_probs=29.8
Q ss_pred CceeEEEEccccch------------hhHHHHHHHHHHHHhcCCeEEEcCCchHHH
Q psy9123 21 QSKIAVLLHSDLNN------------ITCDEKWMRDIKNQNESGSVLVPCYPSGVI 64 (118)
Q Consensus 21 ~~~~~~~~~~~~~~------------~~~~eL~~~I~~Tl~~GG~VLIPaFavGRt 64 (118)
+.+||+++. |.+- +...++...+.+.++.||.+++-+.+....
T Consensus 277 ~~~fD~Ii~-dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 331 (382)
T 1wxx_A 277 GERFDLVVL-DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT 331 (382)
T ss_dssp TCCEEEEEE-CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC
T ss_pred CCCeeEEEE-CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC
Confidence 357999885 4332 334567777778899999999976654443
No 256
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=30.22 E-value=55 Score=21.77 Aligned_cols=31 Identities=13% Similarity=-0.132 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
.++..+.|.+.++.||.|+|=|.+- ||+=-+
T Consensus 76 ~~~~~~~i~~~~~~~~~vlvHC~aG~~RS~~~ 107 (154)
T 2r0b_A 76 FPMTKEFIDGSLQMGGKVLVHGNAGISRSAAF 107 (154)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCChHHHH
Confidence 4667788888889999999999987 896554
No 257
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=30.07 E-value=21 Score=25.09 Aligned_cols=40 Identities=5% Similarity=-0.089 Sum_probs=25.0
Q ss_pred ce-eEEEEcccc-chhhHHHHHHHHH--HHHhcCCeEEEcCCch
Q psy9123 22 SK-IAVLLHSDL-NNITCDEKWMRDI--KNQNESGSVLVPCYPS 61 (118)
Q Consensus 22 ~~-~~~~~~~~~-~~~~~~eL~~~I~--~Tl~~GG~VLIPaFav 61 (118)
.+ ||+++...- .....+++.+.+. +.++.||.+++-+.+.
T Consensus 123 ~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 123 QPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp SCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 46 998886433 1233445555553 3589999999866554
No 258
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=29.93 E-value=21 Score=27.13 Aligned_cols=37 Identities=19% Similarity=0.068 Sum_probs=28.1
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSG 62 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavG 62 (118)
.+||+++.....+... +.+.+.++.||.++|++.+.+
T Consensus 143 ~~fD~Iv~~~~~~~~~----~~~~~~LkpgG~lvi~~~~~~ 179 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP----ETWFTQLKEGGRVIVPINLKL 179 (317)
T ss_dssp CCEEEEEECSBBSCCC----HHHHHHEEEEEEEEEEBCBGG
T ss_pred CCeEEEEEcCCHHHHH----HHHHHhcCCCcEEEEEECCCC
Confidence 4799998876655443 456778999999999987654
No 259
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=29.78 E-value=53 Score=23.19 Aligned_cols=37 Identities=14% Similarity=0.016 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH--HHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL--FECLS 72 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL--L~~L~ 72 (118)
..++..+.|.+.++.||.|+|=|.+- ||+=-+ .|++.
T Consensus 82 ~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~ 121 (188)
T 2esb_A 82 FFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMK 121 (188)
T ss_dssp GHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHH
Confidence 35677788888889999999999987 896543 44443
No 260
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=29.65 E-value=50 Score=22.30 Aligned_cols=52 Identities=13% Similarity=0.148 Sum_probs=29.2
Q ss_pred HHHHHhcCCeEEEcCC----------chHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHHHH
Q psy9123 44 DIKNQNESGSVLVPCY----------PSGVIYDLFECLSSHLDNSSLTQIPMFFISPVADIS 95 (118)
Q Consensus 44 I~~Tl~~GG~VLIPaF----------avGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~~a 95 (118)
|...+++|..|++.-| +.+.-++.+..+..+......|+.=||++.|-....
T Consensus 75 i~~~l~~g~~vi~dr~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~l~~~~e~~~ 136 (197)
T 2z0h_A 75 IKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETAL 136 (197)
T ss_dssp HTTC----CEEEEESCHHHHHHHTTTTTCSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHH
T ss_pred HHHHHhCCCEEEECCChhHHHHHHHhccCCCHHHHHHHHHHhcCCCCCCEEEEEeCCHHHHH
Confidence 5556778888887743 222234555555554444445778899999876544
No 261
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=29.54 E-value=36 Score=24.90 Aligned_cols=37 Identities=8% Similarity=-0.147 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHH
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSH 74 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l 74 (118)
..+.+.+.+.++.||.+++=+..-.-...++..+..+
T Consensus 148 ~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~ 184 (235)
T 3ckk_A 148 PTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEH 184 (235)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 4688889999999999999888766666666666543
No 262
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=29.49 E-value=35 Score=26.65 Aligned_cols=37 Identities=8% Similarity=0.159 Sum_probs=27.9
Q ss_pred CceeEEEEccccchh--hHHHHHHHHHHHHhcCCeEEEc
Q psy9123 21 QSKIAVLLHSDLNNI--TCDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~--~~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..+||+++......- ...++.+.+.+.++.||.+++=
T Consensus 164 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 457999987654432 2467788888999999999984
No 263
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=29.47 E-value=24 Score=25.98 Aligned_cols=37 Identities=8% Similarity=0.066 Sum_probs=27.3
Q ss_pred ceeEEEEccccchhh--HHHHHHHHHHHHhcCCeEEEcC
Q psy9123 22 SKIAVLLHSDLNNIT--CDEKWMRDIKNQNESGSVLVPC 58 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~--~~eL~~~I~~Tl~~GG~VLIPa 58 (118)
.+||+++........ .+++.+.+.+.++.||.+++-.
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 88 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 479998887653322 3577788888999999998643
No 264
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=29.43 E-value=1.9e+02 Score=21.98 Aligned_cols=47 Identities=6% Similarity=0.048 Sum_probs=31.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE--c-CCchHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV--P-CYPSGVIYDLFECLS 72 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI--P-aFavGRtqELL~~L~ 72 (118)
.++|+++.++-+..-. +.+.++++.|-.|++ | +....-+++|.....
T Consensus 65 ~~~D~V~i~tp~~~h~----~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~ 114 (354)
T 3db2_A 65 EDVEMVIITVPNDKHA----EVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIK 114 (354)
T ss_dssp SSCCEEEECSCTTSHH----HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCChHHHH----HHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHH
Confidence 4678888887765543 344567778888888 5 566666777666543
No 265
>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}
Probab=28.47 E-value=36 Score=22.62 Aligned_cols=35 Identities=9% Similarity=0.093 Sum_probs=26.9
Q ss_pred cCCCceeEEEEccccchhhHHHHHHHHHHHHhcCC
Q psy9123 18 SNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNESG 52 (118)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG 52 (118)
|++.+.-.++..+|.+++..++..++..+++++-.
T Consensus 7 ~~~~~~k~~I~~~DM~~emq~~a~~~a~~al~~~~ 41 (97)
T 4ds1_A 7 SDENKSTPIVKASDITDKLKEDILTISKDALDKYQ 41 (97)
T ss_dssp -----CCCEEEEEEECHHHHHHHHHHHHHHHHHCS
T ss_pred ccccCCccEEEECCCCHHHHHHHHHHHHHHHHHcC
Confidence 44556667888999999999999999999998765
No 266
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=27.78 E-value=31 Score=27.12 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=25.6
Q ss_pred ceeEEEEccc-----cchhhHHHHHHHHHHHHhcCCeEE
Q psy9123 22 SKIAVLLHSD-----LNNITCDEKWMRDIKNQNESGSVL 55 (118)
Q Consensus 22 ~~~~~~~~~~-----~~~~~~~eL~~~I~~Tl~~GG~VL 55 (118)
.+||+++..- ..+...+.+...+.+.++.||.++
T Consensus 128 ~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li 166 (376)
T 3r0q_C 128 EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMY 166 (376)
T ss_dssp SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEE
T ss_pred CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEE
Confidence 6899988622 233557788889999999999774
No 267
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=27.75 E-value=43 Score=26.07 Aligned_cols=32 Identities=13% Similarity=0.176 Sum_probs=24.4
Q ss_pred EEEEcccc----chhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 25 AVLLHSDL----NNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 25 ~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
|+.+.+.. ..+...++.+.+.+.++.||.++|
T Consensus 263 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 298 (368)
T 3reo_A 263 DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIV 298 (368)
T ss_dssp SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 77665543 445556788889999999999998
No 268
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=27.73 E-value=60 Score=21.97 Aligned_cols=31 Identities=13% Similarity=-0.039 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
.++..+.|.+.+++||.|+|=|.+- ||+=-+
T Consensus 71 ~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~v 102 (155)
T 2hxp_A 71 FPEAIEFIDEALSQNCGVLVHSLAGVSRSVTV 102 (155)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECCCCCchhHHH
Confidence 3566777888888999999999987 896544
No 269
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=27.63 E-value=43 Score=26.04 Aligned_cols=32 Identities=13% Similarity=0.193 Sum_probs=24.5
Q ss_pred EEEEcccc----chhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 25 AVLLHSDL----NNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 25 ~~~~~~~~----~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
|+.+.+.. ..+...++.+.+.+.++.||.++|
T Consensus 261 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 296 (364)
T 3p9c_A 261 DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVL 296 (364)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 77665543 345566788889999999999998
No 270
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=27.54 E-value=1.4e+02 Score=20.69 Aligned_cols=55 Identities=7% Similarity=-0.019 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhh---c---CCCCCCCEEEeChhHHHH
Q psy9123 39 EKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLD---N---SSLTQIPMFFISPVADIS 95 (118)
Q Consensus 39 eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~---~---~~Lp~iPIyldSPmA~~a 95 (118)
++.+.+...++.|..||+- |... .++-...+.++.. . ...|..-||++.|...-.
T Consensus 86 ~~~~~~~~~l~~g~~VI~d-~~~~-~~~~~~~l~~l~~~~~~~~~~~~p~~vi~Ld~~~e~~~ 146 (211)
T 1m7g_A 86 RIAEVAKLFADSNSIAITS-FISP-YRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVEVAE 146 (211)
T ss_dssp HHHHHHHHHHHTTCEEEEE-CCCC-CHHHHHHHHHHHHCCCTTCSCCCCEEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEe-cCCc-cHHHHHHHHHHhhhcccccccCCCeEEEEEeCCHHHHH
Confidence 3444455667788777776 4421 1122233333333 2 234567789999876544
No 271
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=27.45 E-value=1e+02 Score=22.59 Aligned_cols=37 Identities=14% Similarity=-0.055 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcCCch-HHHHH--HHHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPCYPS-GVIYD--LFECLS 72 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqE--LL~~L~ 72 (118)
..++..+.|.+.++.||+|||=|.+- ||+=- +.|++.
T Consensus 68 ~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~ 107 (211)
T 2g6z_A 68 HFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMK 107 (211)
T ss_dssp GHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHHHHHHHHH
Confidence 45777888888899999999999987 89644 345553
No 272
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=27.44 E-value=24 Score=27.21 Aligned_cols=39 Identities=5% Similarity=0.104 Sum_probs=28.1
Q ss_pred CceeEEEEccccc-------hhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDLN-------NITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~~-------~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..+||+++...-. .+..+++.+.+.+.++.||.++|=+.
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 3479999876432 23356777788888999999998543
No 273
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=27.19 E-value=79 Score=20.88 Aligned_cols=31 Identities=16% Similarity=0.086 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHh-cCCeEEEcCCch-HHHHHH
Q psy9123 37 CDEKWMRDIKNQN-ESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 37 ~~eL~~~I~~Tl~-~GG~VLIPaFav-GRtqEL 67 (118)
..+..+.|.+.++ .||.|+|=|.+- ||+=-+
T Consensus 70 ~~~~~~~i~~~~~~~~~~vlVHC~aG~~RSg~~ 102 (151)
T 2e0t_A 70 FQTAADFIHRALSQPGGKILVHCAVGVSRSATL 102 (151)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEECSSSSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCCChHHHH
Confidence 4567777888887 799999999987 996644
No 274
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=27.17 E-value=19 Score=25.27 Aligned_cols=36 Identities=8% Similarity=0.060 Sum_probs=26.5
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
.+||+++......... +.+.+.++.||.+++...+.
T Consensus 133 ~~fD~v~~~~~~~~~~----~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL----CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSCC----HHHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHH----HHHHHHcCCCcEEEEEEcCC
Confidence 4799998876655433 34667899999999987543
No 275
>3o2e_A BOLA-like protein; ssgcid, iodide, SAD, seattle structural genom center for infectious disease, BOL like protein, unknown FU; 1.95A {Babesia bovis}
Probab=27.03 E-value=32 Score=23.65 Aligned_cols=31 Identities=3% Similarity=-0.214 Sum_probs=21.1
Q ss_pred CCCceeEEEEccccchhh-HHHHHHHHHHHHh
Q psy9123 19 NGQSKIAVLLHSDLNNIT-CDEKWMRDIKNQN 49 (118)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~-~~eL~~~I~~Tl~ 49 (118)
++++.|+|.++|+.++.- .-+=-+.|+++++
T Consensus 49 g~gsHf~v~IVS~~F~Gks~v~RHRlVy~aL~ 80 (105)
T 3o2e_A 49 GCGAAFNAYIVSQQFEGKGLLDRQRLVNSAIA 80 (105)
T ss_dssp TTBEEEEEEEECGGGTTCCHHHHHHHHHHHTT
T ss_pred CCCcEEEEEEEchHhCCCCHHHHHHHHHHHHH
Confidence 678999999999988754 2222445555553
No 276
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=26.77 E-value=12 Score=27.05 Aligned_cols=45 Identities=9% Similarity=0.016 Sum_probs=31.4
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECL 71 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L 71 (118)
.+||+++..... ...+.+.+.++.||.+++-.+..+...++...+
T Consensus 147 ~~fD~v~~~~~~-----~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~ 191 (269)
T 1p91_A 147 TSMDAIIRIYAP-----CKAEELARVVKPGGWVITATPGPRHLMELKGLI 191 (269)
T ss_dssp TCEEEEEEESCC-----CCHHHHHHHEEEEEEEEEEEECTTTTHHHHTTT
T ss_pred CceeEEEEeCCh-----hhHHHHHHhcCCCcEEEEEEcCHHHHHHHHHHh
Confidence 479999876543 235567788999999998777666666654333
No 277
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=26.76 E-value=38 Score=26.86 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=27.4
Q ss_pred CceeEEEEccc-------cchhhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSD-------LNNITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~-------~~~~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
..+||+++... .......++.+.+.+.++.||.++|-+.
T Consensus 290 ~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 35899988642 2233345778888889999999999443
No 278
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=26.71 E-value=71 Score=21.14 Aligned_cols=31 Identities=10% Similarity=0.131 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
.++..+.|.+..+.||.|+|=|.+- ||+=-+
T Consensus 69 ~~~~~~~i~~~~~~~~~VlVHC~~G~~RSg~~ 100 (149)
T 1zzw_A 69 FEEAFEFIEEAHQCGKGLLIHCQAGVSRSATI 100 (149)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCCCCHHHHH
Confidence 4566778888888999999999987 897665
No 279
>1k7j_A Protein YCIO, protein TF1; structural genomics, X-RAY crystallography, putative translation factor, PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.115.1.1 PDB: 1kk9_A
Probab=26.54 E-value=43 Score=24.65 Aligned_cols=22 Identities=9% Similarity=0.176 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhcCCeEEEcCCc
Q psy9123 39 EKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 39 eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
+..+.+.+.+++||.|.+|+..
T Consensus 15 ~~i~~a~~~L~~G~iva~pTdt 36 (206)
T 1k7j_A 15 RLINQAVEIVRKGGVIVYPTDS 36 (206)
T ss_dssp HHHHHHHHHHHTTCCEEEEETT
T ss_pred HHHHHHHHHHHCCCEEEEECCC
Confidence 3355667789999999999864
No 280
>2d30_A Cytidine deaminase; purines, pyrimidines, nucleosides, nucleotides, salvage of nucleosides and nucleotides, structural genomics; 2.40A {Bacillus anthracis} SCOP: c.97.1.1
Probab=26.21 E-value=91 Score=21.97 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=28.9
Q ss_pred cCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeChhHH-HHHHHHHHHHhhhhHHH
Q psy9123 57 PCYPSGVIYDLFECLSSHLDNSSLTQIPMFFISPVAD-ISLAYSNILAEWNTKVE 110 (118)
Q Consensus 57 PaFavGRtqELL~~L~~l~~~~~Lp~iPIyldSPmA~-~al~~~~~~~Ewl~~~~ 110 (118)
|+.|+|+=.+.|..+ +. +++||++..+-.. +...+.+..|.++.++.
T Consensus 91 ~~~PCG~CRQ~l~E~------~~-~~~~V~~~~~~g~~~~~~l~eLLP~~F~~~~ 138 (141)
T 2d30_A 91 PVPPCGACRQVMVEL------CK-QDTKVYLSNLHGDVQETTVGELLPGAFLAED 138 (141)
T ss_dssp CCCCCHHHHHHHHHH------SC-TTCEEEEECSSSCEEEEEHHHHSTTC-----
T ss_pred ccCcCHHHHHHHHHh------cC-CCeEEEEECCCCCEEEEEHHHhCCCCCChhh
Confidence 678999998888776 22 5789999876431 12335677777776643
No 281
>3hvw_A Diguanylate-cyclase (DGC); alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.70A {Pseudomonas aeruginosa}
Probab=26.18 E-value=75 Score=21.40 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=21.4
Q ss_pred ccCCCceeEEEEccccchhhHHHHHHHHHHHHhc
Q psy9123 17 SSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNE 50 (118)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~ 50 (118)
..-|+..|.|++.. ...+...++++.|.+.++.
T Consensus 74 ~R~~~deF~ill~~-~~~~~~~~~~~~l~~~~~~ 106 (176)
T 3hvw_A 74 YKISPTRFGLLLPR-QQQEETESVCLRLLRAFES 106 (176)
T ss_dssp EEEETTEEEEEEEG-GGGGGHHHHHHHHHHHTTS
T ss_pred EEecCCEEEEEeCC-CCHHHHHHHHHHHHHHHhC
Confidence 34578899998876 3444556666666666543
No 282
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=26.06 E-value=70 Score=25.02 Aligned_cols=59 Identities=3% Similarity=-0.084 Sum_probs=37.0
Q ss_pred eeEEEEccccc--hhh--HHHHHHHHHHHHhcCCeEEEcCCchHHHHHHHHHHHHHhhcCCCC
Q psy9123 23 KIAVLLHSDLN--NIT--CDEKWMRDIKNQNESGSVLVPCYPSGVIYDLFECLSSHLDNSSLT 81 (118)
Q Consensus 23 ~~~~~~~~~~~--~~~--~~eL~~~I~~Tl~~GG~VLIPaFavGRtqELL~~L~~l~~~~~Lp 81 (118)
.++|++++.+- .+. ...+...+.+.++.||.++|=.+...-.-+-+..+.+.++..+.|
T Consensus 161 p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p 223 (277)
T 3giw_A 161 PVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMP 223 (277)
T ss_dssp CCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCC
T ss_pred cchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCC
Confidence 45677777662 222 356778888899999999986554432223344555566665553
No 283
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=26.05 E-value=69 Score=25.36 Aligned_cols=56 Identities=11% Similarity=0.082 Sum_probs=37.3
Q ss_pred CceeEEEEccccch-----h--hHHHHHHHHHHHHhcCCeEEEcCCch---HHHHHHHHHHHHHhhc
Q psy9123 21 QSKIAVLLHSDLNN-----I--TCDEKWMRDIKNQNESGSVLVPCYPS---GVIYDLFECLSSHLDN 77 (118)
Q Consensus 21 ~~~~~~~~~~~~~~-----~--~~~eL~~~I~~Tl~~GG~VLIPaFav---GRtqELL~~L~~l~~~ 77 (118)
..+|||++. |... . ...++.+.+.+.|+.||.+++-+... .-...++..|.+.+..
T Consensus 157 ~~~fDvIi~-D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~ 222 (317)
T 3gjy_A 157 PASRDVIIR-DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEH 222 (317)
T ss_dssp TTCEEEEEE-CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSE
T ss_pred CCCCCEEEE-CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCc
Confidence 458999886 3211 1 12688889999999999999876532 2245666666665543
No 284
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=25.97 E-value=95 Score=20.41 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=21.1
Q ss_pred ccCCCceeEEEEccccchhhHHHHHHHHHHHHhc
Q psy9123 17 SSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNE 50 (118)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~ 50 (118)
..-|+..|.|++... ..+...++++.|.+.+..
T Consensus 89 ~R~~~d~F~ill~~~-~~~~~~~~~~~i~~~~~~ 121 (177)
T 3hva_A 89 ARFGDSIFAALFKGK-TPEQAQAALQRLLKKVEN 121 (177)
T ss_dssp EECSSSEEEEEEETC-CHHHHHHHHHHHHHHHHT
T ss_pred EEecCCeEEEEeCCC-CHHHHHHHHHHHHHHHHh
Confidence 446789999988653 444445566666666554
No 285
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=25.95 E-value=1.2e+02 Score=18.70 Aligned_cols=12 Identities=17% Similarity=0.559 Sum_probs=7.9
Q ss_pred CCCCEEEeChhH
Q psy9123 81 TQIPMFFISPVA 92 (118)
Q Consensus 81 p~iPIyldSPmA 92 (118)
+++||.+.|...
T Consensus 91 ~~~~ii~~t~~~ 102 (149)
T 1k66_A 91 KKIPVVIMTTSS 102 (149)
T ss_dssp GGSCEEEEESCC
T ss_pred CCCeEEEEeCCC
Confidence 567887776543
No 286
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=25.56 E-value=56 Score=25.41 Aligned_cols=28 Identities=18% Similarity=0.294 Sum_probs=23.0
Q ss_pred cCCeEEEcCCchHHHHHHHHHHHHHhhc
Q psy9123 50 ESGSVLVPCYPSGVIYDLFECLSSHLDN 77 (118)
Q Consensus 50 ~GG~VLIPaFavGRtqELL~~L~~l~~~ 77 (118)
.||..+||.....++.++|..|.+.+.+
T Consensus 66 ~gg~~~~~~~~~~~a~~~~~~l~~~l~~ 93 (291)
T 1o57_A 66 AGGVKYIPKMKQAEAEEFVQTLGQSLAN 93 (291)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHTC
T ss_pred CCceEEcccCCHHHHHHHHHHHHHHHHH
Confidence 4688889999999999999888766555
No 287
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=25.46 E-value=1.9e+02 Score=22.59 Aligned_cols=53 Identities=23% Similarity=0.355 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhcCCeEEEcCCc----hHHHHHHHHHHHHHhhcCCCC-CCCEEEeCh
Q psy9123 38 DEKWMRDIKNQNESGSVLVPCYP----SGVIYDLFECLSSHLDNSSLT-QIPMFFISP 90 (118)
Q Consensus 38 ~eL~~~I~~Tl~~GG~VLIPaFa----vGRtqELL~~L~~l~~~~~Lp-~iPIyldSP 90 (118)
.++.+.+.+.....+.|++..++ .|-.+|+.+.+..++.+..+. .++|.+..+
T Consensus 130 ~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~ 187 (430)
T 3hyw_A 130 LETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITS 187 (430)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECS
T ss_pred HHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecc
Confidence 34566666667788889998775 366788888888877776553 577777653
No 288
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=25.42 E-value=1.2e+02 Score=18.66 Aligned_cols=17 Identities=24% Similarity=0.159 Sum_probs=9.1
Q ss_pred ccCCCceeEEEEccccc
Q psy9123 17 SSNGQSKIAVLLHSDLN 33 (118)
Q Consensus 17 ~~~~~~~~~~~~~~~~~ 33 (118)
+.+...+.-||++.|-.
T Consensus 12 ~~~~~~~~~ilivdd~~ 28 (137)
T 2pln_A 12 SLVPRGSMRVLLIEKNS 28 (137)
T ss_dssp ---CTTCSEEEEECSCH
T ss_pred cccCCCCCeEEEEeCCH
Confidence 44555666777776643
No 289
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=25.35 E-value=1.3e+02 Score=22.63 Aligned_cols=61 Identities=13% Similarity=-0.030 Sum_probs=38.6
Q ss_pred CCceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCch-------------------------------HHHHHHH
Q psy9123 20 GQSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPS-------------------------------GVIYDLF 68 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFav-------------------------------GRtqELL 68 (118)
++.++|+++-+.-.+... +.+ +.+++||.++.-..+. ....+.+
T Consensus 210 ~~~g~Dvvid~~g~~~~~----~~~-~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (340)
T 3gms_A 210 NGIGADAAIDSIGGPDGN----ELA-FSLRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETF 284 (340)
T ss_dssp TTSCEEEEEESSCHHHHH----HHH-HTEEEEEEEEECCCTTSCCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHH
T ss_pred CCCCCcEEEECCCChhHH----HHH-HHhcCCCEEEEEeecCCCCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHH
Confidence 445799998766544432 223 6889999988754322 2334566
Q ss_pred HHHHHHhhcCCCCCCCE
Q psy9123 69 ECLSSHLDNSSLTQIPM 85 (118)
Q Consensus 69 ~~L~~l~~~~~Lp~iPI 85 (118)
..+.+++++++++.-+|
T Consensus 285 ~~~~~l~~~g~l~~~~i 301 (340)
T 3gms_A 285 RHLIRLVENEQLRFMKV 301 (340)
T ss_dssp HHHHHHHHTTSSCCCCE
T ss_pred HHHHHHHHcCCCccccc
Confidence 67777888888853234
No 290
>1yzy_A Hypothetical protein HI1011; putative tRNA synthase, structural genomics, PSI, protein structure initiative; 2.10A {Haemophilus influenzae} SCOP: c.146.1.1
Probab=25.25 E-value=52 Score=26.77 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=24.4
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
|||| |++.-.--.| .+++.+.+.....+++|+||.
T Consensus 83 sr~D----STlRGnig~e-~dal~~~~g~~~~iv~PAfP~ 117 (413)
T 1yzy_A 83 STFD----STAKGNIGPV-TDALLDELNEDFTVITPALPV 117 (413)
T ss_dssp TTCC----CCTTCTHHHH-HHHHHHHHTCCCEEECCCBGG
T ss_pred cCcc----CCCCCChHHH-HHHHHHHhCCCcEEEEccccC
Confidence 5555 6666555445 445666777778999999985
No 291
>3dqq_A Putative tRNA synthase; structural genomics, unknown function, center for structural genomics of infecti diseases; 2.70A {Salmonella typhimurium} SCOP: c.146.1.1
Probab=25.13 E-value=54 Score=26.78 Aligned_cols=33 Identities=18% Similarity=0.075 Sum_probs=23.3
Q ss_pred cccchhhHHHHHHHHHHHHhcCCeEEEcCCch-HH
Q psy9123 30 SDLNNITCDEKWMRDIKNQNESGSVLVPCYPS-GV 63 (118)
Q Consensus 30 ~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFav-GR 63 (118)
|++.-.--.| .+++.+.+.....+++|+||. ||
T Consensus 90 STlRGnig~e-~dal~~~lg~~~~vv~PAfP~~GR 123 (421)
T 3dqq_A 90 STAEGNIGPV-TDALMVALDTSFTVISPALPVNGR 123 (421)
T ss_dssp CBTTBSHHHH-HHHHHHHTTCSCEEEECCBGGGTE
T ss_pred CCCCCCcHHH-HHHHHHHhCCCeEEEEcccccCCc
Confidence 5566444444 467777777788999999975 44
No 292
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=25.04 E-value=75 Score=21.89 Aligned_cols=31 Identities=16% Similarity=-0.008 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
.++..+.|.+..+.||.|+|=|.+- ||+=-+
T Consensus 94 ~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 125 (176)
T 3cm3_A 94 FDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAM 125 (176)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSSSSSHHHHH
T ss_pred HHHHHHHHHHHHHCCCcEEEECCcCCCHHHHH
Confidence 5778888899998999999999985 895544
No 293
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=24.99 E-value=70 Score=25.49 Aligned_cols=43 Identities=5% Similarity=-0.018 Sum_probs=30.9
Q ss_pred ceeEEEEccc-------cchhhHHHHHHHHHHHHhcCCeEEEcCCchHHH
Q psy9123 22 SKIAVLLHSD-------LNNITCDEKWMRDIKNQNESGSVLVPCYPSGVI 64 (118)
Q Consensus 22 ~~~~~~~~~~-------~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGRt 64 (118)
.+||+++... ...+..+++.+.+.+.++.||.++|-+.+--..
T Consensus 297 ~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 297 ARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp CCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred CCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 5899998642 123445678888889999999999976554333
No 294
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=24.85 E-value=80 Score=21.64 Aligned_cols=32 Identities=16% Similarity=0.009 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHHhc-CCeEEEcCCc-hHHHHH
Q psy9123 35 ITCDEKWMRDIKNQNE-SGSVLVPCYP-SGVIYD 66 (118)
Q Consensus 35 ~~~~eL~~~I~~Tl~~-GG~VLIPaFa-vGRtqE 66 (118)
+..++..+.|.+.++. ||.|+|=|.+ .||+=-
T Consensus 98 ~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~RSg~ 131 (183)
T 3f81_A 98 AYFERAADFIDQALAQKNGRVLVHCREGYSRSPT 131 (183)
T ss_dssp GGHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCCCcchHHH
Confidence 3457888899999888 9999999988 478655
No 295
>2js7_A Myeloid differentiation primary response protein MYD88; MYD88_human, TIR domain, TOLL like receptor adaptor domain, innate immune signaling; NMR {Homo sapiens} PDB: 2z5v_A
Probab=24.82 E-value=12 Score=26.56 Aligned_cols=39 Identities=13% Similarity=-0.019 Sum_probs=28.7
Q ss_pred CceeEEEEccccchhh---HHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDLNNIT---CDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~---~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
+|+.-|+|.|.-...+ ..|+..+....++.++..+||++
T Consensus 71 ~Sr~~IvVlS~~y~~S~wc~~El~~a~~~~~~~~~~~vIpV~ 112 (160)
T 2js7_A 71 RCRRMVVVVSDDYLQSKECDFQTKFALSLSPGAHQKRLIPIK 112 (160)
T ss_dssp HEEEEEEECCHHHHHSHHHHHHHHHHHHHCTTHHHHTEEEEE
T ss_pred hCCEEEEEECcchhcCHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 4888899988654433 45777777766677788899997
No 296
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=24.79 E-value=65 Score=25.03 Aligned_cols=37 Identities=8% Similarity=-0.051 Sum_probs=27.0
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.++|.+|.. +..-.+|+.+.+..-.+.||+.++|.--
T Consensus 376 ~~~d~vl~~--~~~~~~ei~~~~~~~~~~g~~~~~~~p~ 412 (416)
T 4e2x_A 376 PYPDYALLF--AWNHAEEIMAKEQEFHQAGGRWILYVPE 412 (416)
T ss_dssp SCCSEEEES--CGGGHHHHHHHCHHHHHTTCEEEECSSS
T ss_pred cCCCEEEEe--cchhHHHHHHHHHHHHhcCCEEEEECCc
Confidence 466754443 4445788888888888999999999753
No 297
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=24.69 E-value=1.2e+02 Score=22.64 Aligned_cols=60 Identities=7% Similarity=-0.133 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcC-------Cch-HH--HHHHHHHHHHHhhcCCCCCCCEEEeChhHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPC-------YPS-GV--IYDLFECLSSHLDNSSLTQIPMFFISPVADIS 95 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPa-------Fav-GR--tqELL~~L~~l~~~~~Lp~iPIyldSPmA~~a 95 (118)
..+.+.+.|..++++|..||.== |.. || -.+.+..|.+.......|++=||||-|-....
T Consensus 100 R~~~~~~~I~paL~~g~~VI~DRy~~S~~AYq~~~rgl~~~~i~~l~~~~~~~~~PDlvi~Ldv~~e~~~ 169 (236)
T 3lv8_A 100 RVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQTALGDFKPDLTLYLDIDPKLGL 169 (236)
T ss_dssp HHHHHHHTHHHHHHTTCEEEEESCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEeeecchHHhhhhhccCCCHHHHHHHHHHHhcCCCCCEEEEEeCCHHHHH
Confidence 34455667788888888887652 221 22 24666777665545556889999999976543
No 298
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=24.57 E-value=82 Score=23.00 Aligned_cols=21 Identities=10% Similarity=-0.024 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhcCCeEEEc
Q psy9123 37 CDEKWMRDIKNQNESGSVLVP 57 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIP 57 (118)
..++.+.+.+.++.||.+++-
T Consensus 217 ~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 217 IVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp HHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEE
Confidence 456777777789999999874
No 299
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=24.50 E-value=74 Score=24.50 Aligned_cols=38 Identities=11% Similarity=0.102 Sum_probs=25.6
Q ss_pred EEEEccccc--hhhHHHHHHHHHHHHhcCC----eEEEcCCchHH
Q psy9123 25 AVLLHSDLN--NITCDEKWMRDIKNQNESG----SVLVPCYPSGV 63 (118)
Q Consensus 25 ~~~~~~~~~--~~~~~eL~~~I~~Tl~~GG----~VLIPaFavGR 63 (118)
||.+..+.. ++..-||+ .+.+++++.| +++||.|+-.|
T Consensus 49 dv~iiqs~~~pn~~lmell-~~~~a~~~~~a~~i~~v~Py~~yaR 92 (284)
T 1u9y_A 49 EAVIINTQKNQNDAIVETI-LLCDALRDEGVKKITLVAPYLAYAR 92 (284)
T ss_dssp EEEEECCCSSHHHHHHHHH-HHHHHHHTTTCCEEEEECSSCTTCS
T ss_pred EEEEEeCCCCCcHHHHHHH-HHHHHHHHcCCceEEEEecccccce
Confidence 666655443 45666666 4445777766 58999999876
No 300
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=24.40 E-value=78 Score=21.93 Aligned_cols=32 Identities=9% Similarity=0.107 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
..++..+.|.+.++.||.|+|=|.+- ||+=-+
T Consensus 72 ~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 104 (177)
T 2oud_A 72 YFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATI 104 (177)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCCchHHH
Confidence 35667778888888999999999986 897665
No 301
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=24.36 E-value=97 Score=20.43 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=21.9
Q ss_pred ccCCCceeEEEEccccchhhHHHHHHHHHHHHhc
Q psy9123 17 SSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQNE 50 (118)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~ 50 (118)
..-|+..|.|++... ..+...++++.|.+.+..
T Consensus 84 ~R~~~d~F~ill~~~-~~~~~~~~~~~i~~~~~~ 116 (177)
T 3ign_A 84 GRYGGEEFGIILPET-DAESARVICERIREAIEK 116 (177)
T ss_dssp EECSSSEEEEEEETC-CHHHHHHHHHHHHHHHHT
T ss_pred EEecCCeEEEEeCCC-CHHHHHHHHHHHHHHHHh
Confidence 345789999988653 444556666677666654
No 302
>2kz0_A BOLA family protein; BOLA protein family, human monocytotropic ehrlichiosis, STRE response, structural genomics; NMR {Ehrlichia chaffeensis}
Probab=24.00 E-value=32 Score=22.11 Aligned_cols=33 Identities=9% Similarity=-0.135 Sum_probs=23.0
Q ss_pred CCCceeEEEEccccchhh-HHHHHHHHHHHHhcC
Q psy9123 19 NGQSKIAVLLHSDLNNIT-CDEKWMRDIKNQNES 51 (118)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~-~~eL~~~I~~Tl~~G 51 (118)
.+|+.|.|.++|+.++.- .-+=-+.|+.+++.-
T Consensus 31 G~g~Hf~v~IVS~~F~G~s~v~rHr~Vy~~L~~e 64 (76)
T 2kz0_A 31 GDNNHYSIKVISSQFQGKSKLEQHRMIYKVLDGL 64 (76)
T ss_dssp STTSCCEEEEEEGGGTTCCHHHHHHHHHHHTTTS
T ss_pred CCccEEEEEEEchHhCCCCHHHHHHHHHHHhccC
Confidence 678999999999988754 222355666666543
No 303
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=23.94 E-value=31 Score=23.97 Aligned_cols=32 Identities=9% Similarity=0.118 Sum_probs=23.9
Q ss_pred eEEEEccccchhhHHHHHHHHHHHHhcCCeEEE
Q psy9123 24 IAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV 56 (118)
Q Consensus 24 ~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI 56 (118)
||+++.. .......++.+.+.+.++.||.+++
T Consensus 127 fD~v~~~-~~~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 127 IDILFMD-CDVFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp EEEEEEE-TTTSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCEEEEc-CChhhhHHHHHHHHHhcCCCeEEEE
Confidence 9988754 3333446677778889999999998
No 304
>1jcu_A Conserved protein MTH1692; mixed alpha-beta structure, structural genomics; NMR {Methanothermobacterthermautotrophicus} SCOP: d.115.1.1
Probab=23.73 E-value=54 Score=24.22 Aligned_cols=22 Identities=18% Similarity=0.216 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhcCCeEEEcCCc
Q psy9123 39 EKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 39 eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
+..+.+.+.+++||.|.+|+..
T Consensus 14 ~~i~~a~~~L~~G~vVa~pTdt 35 (208)
T 1jcu_A 14 DVLEEAISVMEGGGIVIYPTDT 35 (208)
T ss_dssp HHHHHHHHHHHTTCEEECCCSS
T ss_pred HHHHHHHHHHHCCCEEEEECCC
Confidence 3355667789999999999865
No 305
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=23.73 E-value=1.8e+02 Score=22.31 Aligned_cols=61 Identities=13% Similarity=-0.007 Sum_probs=43.3
Q ss_pred eEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHH--HHHHHHHHHHHh-----hcCCCCCCCE
Q psy9123 24 IAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGV--IYDLFECLSSHL-----DNSSLTQIPM 85 (118)
Q Consensus 24 ~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGR--tqELL~~L~~l~-----~~~~Lp~iPI 85 (118)
.-+|+-.++..+.+++|++.|.+..+...-++|+.-.-|. +.+|...|.... +.+++| +++
T Consensus 60 ~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP-~~v 127 (250)
T 3ozf_A 60 TKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPL-FGE 127 (250)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCC-EEE
T ss_pred eEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCC-ceE
Confidence 3477888888999999999998877655678888877776 456777776433 345555 444
No 306
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=23.56 E-value=88 Score=21.26 Aligned_cols=31 Identities=19% Similarity=0.100 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
..+..+.|.+..+.||.|+|=|.+- +|+=-+
T Consensus 69 ~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~ 100 (165)
T 1wrm_A 69 FKESIKFIHECRLRGESCLVHCLAGVSRSVTL 100 (165)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEECCCCCChhHHH
Confidence 4667788888888999999999986 896654
No 307
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=23.53 E-value=2.4e+02 Score=21.48 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=30.2
Q ss_pred ceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE--c-CCchHHHHHHHHHHH
Q psy9123 22 SKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV--P-CYPSGVIYDLFECLS 72 (118)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI--P-aFavGRtqELL~~L~ 72 (118)
.++|+++.++-+..- .+.+.++++.|=.|++ | +....-+++|+....
T Consensus 64 ~~vD~V~i~tp~~~H----~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~ 113 (362)
T 3fhl_A 64 PEIDLIVVNTPDNTH----YEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAK 113 (362)
T ss_dssp TTCCEEEECSCGGGH----HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCChHHH----HHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHH
Confidence 357888887766544 2345566777777887 5 566666666665543
No 308
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=23.45 E-value=98 Score=20.30 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
...++.+.|.+..+.||.|+|=|.+- ||+=-+
T Consensus 74 ~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~ 106 (157)
T 3rgo_A 74 NLHKGVQFALKYQALGQCVYVHCKAGRSRSATM 106 (157)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESSSSSSHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCChHHHH
Confidence 45677788888899999999999774 587665
No 309
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=23.20 E-value=46 Score=28.82 Aligned_cols=39 Identities=13% Similarity=0.115 Sum_probs=30.7
Q ss_pred CceeEEEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
-|+.+||++..+.--+ +++++.+.+-+++||++|+-.++
T Consensus 450 L~~Yklvv~P~~~~~~-~~~~~~L~~yV~~GG~lv~t~~s 488 (675)
T 3tty_A 450 LSKYKVVIAPVMYMVK-PGFAERVERFVAQGGTFVTTFFS 488 (675)
T ss_dssp CTTCSEEEETTCCBCC-TTHHHHHHHHHHTTCEEEEETTC
T ss_pred cccCCEEEEeccEecC-HHHHHHHHHHHhcCCEEEEEccC
Confidence 4678999998886554 66788888889999999986543
No 310
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=23.14 E-value=88 Score=26.11 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=39.1
Q ss_pred cchhhHHHHHHHHHHHHhcCCeEEE----------cCCchHHHHHHHHHHHHHhhcCCCCCCCEEEeC
Q psy9123 32 LNNITCDEKWMRDIKNQNESGSVLV----------PCYPSGVIYDLFECLSSHLDNSSLTQIPMFFIS 89 (118)
Q Consensus 32 ~~~~~~~eL~~~I~~Tl~~GG~VLI----------PaFavGRtqELL~~L~~l~~~~~Lp~iPIyldS 89 (118)
..-.+.++|.+...+++.+||++|+ |.-.+.|+.|+=..|.+.+..+-...-++--.|
T Consensus 270 ~~~ks~~~li~~l~~~Vs~~gnlLLNvgP~~dG~i~~~~~~~L~~~G~wl~~~f~~NLA~~~~vtASS 337 (469)
T 3eyp_A 270 SRVKSVRELWDIYCTSVGRNSVLLLNFPPDRRGLIHSTDSLHAALLKQGIDETFSTNLLRGAKVKATN 337 (469)
T ss_dssp GGCCCHHHHHHHHHTTTTBTSEEEEECCCCTTSCCCHHHHHHHHHHHHHHHHHHSCCTTTTCEEEESS
T ss_pred CCcCCHHHHHHHHHHHhcCCCcEEEccCcCCCCCcCHHHHHHHHHHHHHHHHhcCcchhcCCceEEee
Confidence 3445789999999999999999995 444456666666666665554444445554443
No 311
>3zzp_A TS9, ribosomal protein S6; protein folding, RNA-binding; 0.96A {Thermus thermophilus}
Probab=23.02 E-value=65 Score=20.52 Aligned_cols=28 Identities=11% Similarity=0.153 Sum_probs=22.6
Q ss_pred EEEEccccchhhHHHHHHHHHHHHhcCC
Q psy9123 25 AVLLHSDLNNITCDEKWMRDIKNQNESG 52 (118)
Q Consensus 25 ~~~~~~~~~~~~~~eL~~~I~~Tl~~GG 52 (118)
-++|..|+.++..+.+.+-+...+.++|
T Consensus 49 m~Il~P~l~ee~~~~~vek~~~~i~~~G 76 (77)
T 3zzp_A 49 NIVLNPNLDQSQLQNEKEIIQRALENYG 76 (77)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHhcC
Confidence 3567889999999999999998886643
No 312
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=22.92 E-value=15 Score=30.13 Aligned_cols=54 Identities=11% Similarity=0.026 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCchHHH------H-HHHHHHHHHhhcCCC-------CCCCEEEeCh
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPSGVI------Y-DLFECLSSHLDNSSL-------TQIPMFFISP 90 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFavGRt------q-ELL~~L~~l~~~~~L-------p~iPIyldSP 90 (118)
...+.+...+.++.||.+++-...-|-. + .|-..+..+..+|-+ -.+|+|+-|+
T Consensus 204 ~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~ 271 (384)
T 2efj_A 204 FTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPST 271 (384)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCH
T ss_pred HHHHHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCH
Confidence 3456888899999999999865533222 1 333444444455543 2468888877
No 313
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=22.77 E-value=58 Score=26.94 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=29.4
Q ss_pred hhhHHHHHHHHHHHHhcCCeEEE--cCCchHH----HHHHHHHHHHHhh
Q psy9123 34 NITCDEKWMRDIKNQNESGSVLV--PCYPSGV----IYDLFECLSSHLD 76 (118)
Q Consensus 34 ~~~~~eL~~~I~~Tl~~GG~VLI--PaFavGR----tqELL~~L~~l~~ 76 (118)
-.+.++|.+.+.+++.+|||+|+ |-.+-|+ .++.|..+.+.++
T Consensus 293 ~ks~~~Li~~lv~~VskgGnlLLNvgP~~dG~I~~~~~~~L~~iG~wl~ 341 (450)
T 2wvv_A 293 VKTPIEVIDRIVHAVSMGGNMVVNFGPQADGDFRPEEKAMATAIGKWMN 341 (450)
T ss_dssp BCCHHHHHHHHHHHHHTTCEEEEEECCCTTSSCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhcCCceEEEeeCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 35789999999999999999996 3334343 3444445544443
No 314
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=22.60 E-value=1.7e+02 Score=20.48 Aligned_cols=35 Identities=17% Similarity=0.100 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH--HHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL--FECL 71 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL--L~~L 71 (118)
..+..+.|.+..+.||.|+|=|.+- ||+=-+ .|++
T Consensus 89 ~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayLm 126 (190)
T 2wgp_A 89 FDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLM 126 (190)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHH
Confidence 4677788888888999999999987 896544 3544
No 315
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=22.54 E-value=79 Score=21.30 Aligned_cols=32 Identities=13% Similarity=-0.004 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcCCch-HHHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPCYPS-GVIYDL 67 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPaFav-GRtqEL 67 (118)
..++..+.|.+..+.||.|+|=|.+- +|+=-+
T Consensus 69 ~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 101 (160)
T 1yz4_A 69 HFKECINFIHCCRLNGGNCLVHSFAGISRSTTI 101 (160)
T ss_dssp GHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 34667788888888999999999987 896543
No 316
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=22.21 E-value=2.3e+02 Score=20.52 Aligned_cols=60 Identities=5% Similarity=-0.147 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHhcCCeEEEcCC--------chHH--HHHHHHHHHHHhhcCCCCCCCEEEeChhHHHH
Q psy9123 36 TCDEKWMRDIKNQNESGSVLVPCY--------PSGV--IYDLFECLSSHLDNSSLTQIPMFFISPVADIS 95 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~GG~VLIPaF--------avGR--tqELL~~L~~l~~~~~Lp~iPIyldSPmA~~a 95 (118)
..+.+.+.|..++++|..||.==| ..|| -.+.+..+++....+..|++-||+|-|.....
T Consensus 78 R~~~~~~~i~paL~~g~~VI~DRy~~S~~AYq~~~~g~~~~~~~~l~~~~~~~~~PDl~i~Ldv~~e~~~ 147 (213)
T 4tmk_A 78 RVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGL 147 (213)
T ss_dssp HHHHHHHTHHHHHHTTCEEEEECCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEcCcHhHHHHHcccccCCCHHHHHHHHHHhccCCCCCEEEEEeCCHHHHH
Confidence 345556778888999887776422 1223 35667777766655667899999999977544
No 317
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=22.11 E-value=1.3e+02 Score=18.68 Aligned_cols=11 Identities=27% Similarity=0.616 Sum_probs=6.9
Q ss_pred CCCCEEEeChh
Q psy9123 81 TQIPMFFISPV 91 (118)
Q Consensus 81 p~iPIyldSPm 91 (118)
+++||.+.|..
T Consensus 88 ~~~~ii~ls~~ 98 (143)
T 2qvg_A 88 TDIEVFVLTAA 98 (143)
T ss_dssp TTCEEEEEESC
T ss_pred cCCcEEEEeCC
Confidence 56777766554
No 318
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=21.92 E-value=67 Score=24.23 Aligned_cols=36 Identities=17% Similarity=0.089 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCchHHHHH-HHHHHHH
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPSGVIYD-LFECLSS 73 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFavGRtqE-LL~~L~~ 73 (118)
.+.+.+.|.++++++|...| +.+.|++.. +...|.+
T Consensus 24 A~~i~~~i~~a~~~~~~~~l-~LsgGstP~~~y~~L~~ 60 (251)
T 3tx2_A 24 GDRLASAITGALAERGKAMI-VLTGGGTGIALLKHLRD 60 (251)
T ss_dssp HHHHHHHHHHHHHHHSCEEE-EECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEE-EECCCchHHHHHHHHHh
Confidence 34455666666666887655 678888854 4444444
No 319
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=21.72 E-value=67 Score=25.15 Aligned_cols=39 Identities=8% Similarity=0.065 Sum_probs=26.4
Q ss_pred CceeEEEEccccch------------hhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 21 QSKIAVLLHSDLNN------------ITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 21 ~~~~~~~~~~~~~~------------~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
+.+||+++. |.+- ....++...+.+.++.||.+++=+.+
T Consensus 287 ~~~fD~Vi~-dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 287 GEKFDIVVL-DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp TCCEEEEEE-CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCEEEE-CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 347998876 4332 33456666777789999988876544
No 320
>3l7v_A Putative uncharacterized protein SMU.1377C; transcription; 2.26A {Streptococcus mutans}
Probab=21.69 E-value=15 Score=29.48 Aligned_cols=44 Identities=14% Similarity=0.085 Sum_probs=19.1
Q ss_pred cccCCCceeEEEEccccchhhHHHHHHHHHHHHh-cCCeEEEcCCc
Q psy9123 16 ASSNGQSKIAVLLHSDLNNITCDEKWMRDIKNQN-ESGSVLVPCYP 60 (118)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~eL~~~I~~Tl~-~GG~VLIPaFa 60 (118)
||-.|+.|+-=+..+.......+. .+.+.+.++ +||.|.+|+..
T Consensus 22 ~~~~~~~~~~r~~~~~~~~~~~~~-i~~Aa~~L~~~GgIVa~PTdT 66 (295)
T 3l7v_A 22 ASMTGGQQMGRGSMTKHIHWDGNL-SQEGFEIVKGEGGVIVCPTKV 66 (295)
T ss_dssp ------------CCCEEEECCSSC-CHHHHHHHHSTTCEEEEEETT
T ss_pred hcccchhhhhhhhhcccccCChHH-HHHHHHHHHHCCCEEEEECCC
Confidence 334456665555554432222122 233456888 99999999864
No 321
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=21.60 E-value=1.6e+02 Score=18.56 Aligned_cols=15 Identities=13% Similarity=0.381 Sum_probs=9.9
Q ss_pred CCCCCCEEEeChhHH
Q psy9123 79 SLTQIPMFFISPVAD 93 (118)
Q Consensus 79 ~Lp~iPIyldSPmA~ 93 (118)
..+++||.+.|....
T Consensus 86 ~~~~~pii~~t~~~~ 100 (152)
T 3heb_A 86 HTRRSPVVILTTTDD 100 (152)
T ss_dssp TTTTSCEEEEESCCC
T ss_pred cccCCCEEEEecCCC
Confidence 456788888776543
No 322
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=21.33 E-value=53 Score=26.55 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=27.5
Q ss_pred ceeEEEEc----cc-cchhhHHHHHHHHHHHHhcCCeEEEcCCc
Q psy9123 22 SKIAVLLH----SD-LNNITCDEKWMRDIKNQNESGSVLVPCYP 60 (118)
Q Consensus 22 ~~~~~~~~----~~-~~~~~~~eL~~~I~~Tl~~GG~VLIPaFa 60 (118)
.|+||++. +- +.+.....+.....+-|+.||. +||..+
T Consensus 148 e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~-~iP~~a 190 (376)
T 4hc4_A 148 EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGL-LLPASA 190 (376)
T ss_dssp SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEE-EESCEE
T ss_pred ccccEEEeecccccccccchhhhHHHHHHhhCCCCce-ECCccc
Confidence 58999875 22 3455788888888899999986 466543
No 323
>4ef1_A Pheromone COB1/lipoprotein, YAEC family; periplasmic methionine binding protein, NLPA lipoprotein, ST genomics; 1.90A {Enterococcus faecalis} PDB: 4ef2_A*
Probab=21.22 E-value=56 Score=25.23 Aligned_cols=22 Identities=14% Similarity=0.238 Sum_probs=17.5
Q ss_pred HhcCCeEEEcCCch--HHHHHHHH
Q psy9123 48 QNESGSVLVPCYPS--GVIYDLFE 69 (118)
Q Consensus 48 l~~GG~VLIPaFav--GRtqELL~ 69 (118)
++.|.+|-||-.++ ||++.||+
T Consensus 99 L~~Ga~IAIpnd~sn~~RaL~lL~ 122 (246)
T 4ef1_A 99 IPDGSTIYVSSSVSDWPRVLTILE 122 (246)
T ss_dssp SCTTCEEEEESCGGGHHHHHHHHH
T ss_pred cCCCCEEEeecCCchHHHHHHHHH
Confidence 56799999999999 67665554
No 324
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=21.20 E-value=51 Score=24.65 Aligned_cols=39 Identities=10% Similarity=0.182 Sum_probs=27.4
Q ss_pred CceeEEEEccccch-hhHHHHHHHHHHHHhcCCeEEEcCC
Q psy9123 21 QSKIAVLLHSDLNN-ITCDEKWMRDIKNQNESGSVLVPCY 59 (118)
Q Consensus 21 ~~~~~~~~~~~~~~-~~~~eL~~~I~~Tl~~GG~VLIPaF 59 (118)
...||+++++.-.. -..+++..-+.+.++.||.+.+=.+
T Consensus 97 ~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp SSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence 45799888765322 1235677788899999999987544
No 325
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=21.08 E-value=1.2e+02 Score=19.92 Aligned_cols=34 Identities=15% Similarity=-0.015 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHhc--------CCeEEEcCCc-hHHHHHHHH
Q psy9123 36 TCDEKWMRDIKNQNE--------SGSVLVPCYP-SGVIYDLFE 69 (118)
Q Consensus 36 ~~~eL~~~I~~Tl~~--------GG~VLIPaFa-vGRtqELL~ 69 (118)
..+++.+.+.+.++. +|.|+|=|.+ +||+=-++-
T Consensus 86 ~~~~~~~~i~~~~~~~~~~~~~~~~~vlVHC~aG~~RTg~~~a 128 (167)
T 3s4o_A 86 VLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVA 128 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCCCEEEEECSSSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccccCCCcEEEECCCCCCHHHHHHH
Confidence 356777777777655 9999999987 488755443
No 326
>3ir1_A Outer membrane lipoprotein GNA1946; D-methionine cultured, protein binding; 2.15A {Neisseria meningitidis}
Probab=20.72 E-value=51 Score=25.64 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=18.4
Q ss_pred HhcCCeEEEcCCch--HHHHHHHHH
Q psy9123 48 QNESGSVLVPCYPS--GVIYDLFEC 70 (118)
Q Consensus 48 l~~GG~VLIPaFav--GRtqELL~~ 70 (118)
+..|.+|-||-+|+ ||++-||+-
T Consensus 97 l~~Ga~IaIPnDptN~~RaL~lL~~ 121 (245)
T 3ir1_A 97 VKDGSTVSAPNDPSNFARVLVMLDE 121 (245)
T ss_dssp CCTTCEEEEECSHHHHHHHHHHHHH
T ss_pred cCCCCEEEecCCccHHHHHHHHHHH
Confidence 57899999999998 677666553
No 327
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=20.36 E-value=2.8e+02 Score=20.86 Aligned_cols=45 Identities=11% Similarity=0.062 Sum_probs=27.5
Q ss_pred eeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE--c-CCchHHHHHHHHHH
Q psy9123 23 KIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV--P-CYPSGVIYDLFECL 71 (118)
Q Consensus 23 ~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI--P-aFavGRtqELL~~L 71 (118)
++|+++.++-+..- .+.+.++++.|-.|++ | +....-+++|....
T Consensus 66 ~~D~V~i~tp~~~h----~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a 113 (344)
T 3mz0_A 66 NVDAVLVTSWGPAH----ESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEE 113 (344)
T ss_dssp TCCEEEECSCGGGH----HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH
T ss_pred CCCEEEECCCchhH----HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHH
Confidence 57887777755444 2334456777777777 5 55566666665544
No 328
>1xs3_A Hypothetical protein XC975; BOLA-like, structural genomics, AN integrated structural and functional genomic project, unknown function; NMR {Synthetic}
Probab=20.28 E-value=42 Score=21.65 Aligned_cols=29 Identities=3% Similarity=-0.243 Sum_probs=19.7
Q ss_pred CCceeEEEEccccchhh--HHHHHHHHHHHHh
Q psy9123 20 GQSKIAVLLHSDLNNIT--CDEKWMRDIKNQN 49 (118)
Q Consensus 20 ~~~~~~~~~~~~~~~~~--~~eL~~~I~~Tl~ 49 (118)
++|.|+|.++|+.++.- +++ -+.|+++++
T Consensus 30 ~gsHf~v~IVS~~F~G~~~v~R-HrlVy~~L~ 60 (80)
T 1xs3_A 30 DGVHFEATVVSPAFVGKAPLAR-HRMVYATLG 60 (80)
T ss_dssp TTSCCEEEEECGGGCSSCCHHH-HHHHHHHTT
T ss_pred CCCEEEEEEEchhhCCCcHHHH-HHHHHHHHH
Confidence 68999999999988753 222 345555543
No 329
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=20.28 E-value=95 Score=22.91 Aligned_cols=25 Identities=12% Similarity=0.037 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhcCCeEEEcCCch
Q psy9123 37 CDEKWMRDIKNQNESGSVLVPCYPS 61 (118)
Q Consensus 37 ~~eL~~~I~~Tl~~GG~VLIPaFav 61 (118)
..++.+.+.+.++.||.+++-+.+.
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCC
Confidence 4677778888999999999955444
No 330
>3r3t_A 30S ribosomal protein S6; structural genomics, center for structural genomics of infec diseases, csgid, beta-barrel, cytosol; 2.30A {Bacillus anthracis}
Probab=20.20 E-value=43 Score=22.01 Aligned_cols=38 Identities=8% Similarity=0.043 Sum_probs=26.9
Q ss_pred EEEccccchhhHHHHHHHHHHHHhcCCeEEEcCCchHH
Q psy9123 26 VLLHSDLNNITCDEKWMRDIKNQNESGSVLVPCYPSGV 63 (118)
Q Consensus 26 ~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLIPaFavGR 63 (118)
+++..|+.++...++.+-+...+.++|-.+.=...-|+
T Consensus 11 ~Il~p~~~~e~~~~~~~~~~~~i~~~gg~i~~~e~wG~ 48 (99)
T 3r3t_A 11 YIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGK 48 (99)
T ss_dssp CCCCTTSCHHHHHHHHHHHHHHHHTTTCCCCCCCCCCS
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEeec
Confidence 45667788888888888888888765555555555554
No 331
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=20.06 E-value=2.7e+02 Score=20.77 Aligned_cols=45 Identities=4% Similarity=0.045 Sum_probs=26.0
Q ss_pred eeEEEEccccchhhHHHHHHHHHHHHhcCCeEEE--c-CCchHHHHHHHHHH
Q psy9123 23 KIAVLLHSDLNNITCDEKWMRDIKNQNESGSVLV--P-CYPSGVIYDLFECL 71 (118)
Q Consensus 23 ~~~~~~~~~~~~~~~~eL~~~I~~Tl~~GG~VLI--P-aFavGRtqELL~~L 71 (118)
++|+++.++-+..-. +.+.++++.|-.|++ | +....-+.+|....
T Consensus 63 ~~D~V~i~tp~~~h~----~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a 110 (331)
T 4hkt_A 63 DIDAVVICTPTDTHA----DLIERFARAGKAIFCEKPIDLDAERVRACLKVV 110 (331)
T ss_dssp TCCEEEECSCGGGHH----HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH
T ss_pred CCCEEEEeCCchhHH----HHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHH
Confidence 567777776554442 334456667777777 5 55555555555443
Done!