Query psy9135
Match_columns 1107
No_of_seqs 405 out of 2709
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 19:50:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9135.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9135hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 2.1E-66 7.2E-71 613.8 27.4 405 38-558 19-489 (498)
2 3dwl_A Actin-related protein 3 100.0 1.4E-65 4.9E-70 602.4 25.2 344 41-558 4-414 (427)
3 4fo0_A Actin-related protein 8 100.0 6.3E-63 2.1E-67 609.8 25.3 368 89-558 170-582 (593)
4 3qb0_A Actin-related protein 4 100.0 1.5E-61 5E-66 572.5 25.2 343 734-1099 21-497 (498)
5 3dwl_A Actin-related protein 3 100.0 5.8E-61 2E-65 563.3 18.1 337 735-1100 4-422 (427)
6 1k8k_B ARP2, actin-like protei 100.0 2.7E-59 9.4E-64 547.4 16.4 337 41-558 5-383 (394)
7 2fxu_A Alpha-actin-1, actin, a 100.0 3.2E-57 1.1E-61 527.1 29.7 338 40-558 3-367 (375)
8 4fo0_A Actin-related protein 8 100.0 4.5E-56 1.5E-60 548.6 21.2 299 783-1100 170-590 (593)
9 1k8k_A ARP3, actin-like protei 100.0 4E-54 1.4E-58 508.6 28.8 350 41-558 4-405 (418)
10 2fxu_A Alpha-actin-1, actin, a 100.0 3.4E-53 1.2E-57 493.2 25.7 332 735-1100 4-375 (375)
11 1k8k_B ARP2, actin-like protei 100.0 2.1E-54 7.1E-59 506.1 12.3 330 735-1098 5-389 (394)
12 1k8k_A ARP3, actin-like protei 100.0 1.1E-49 3.7E-54 470.7 24.4 339 735-1099 4-412 (418)
13 4am6_A Actin-like protein ARP8 100.0 3.4E-49 1.2E-53 467.7 26.8 371 93-558 196-644 (655)
14 4am6_A Actin-like protein ARP8 100.0 9.3E-45 3.2E-49 429.9 21.2 287 787-1100 196-652 (655)
15 1jce_A ROD shape-determining p 99.9 3.5E-24 1.2E-28 246.0 22.5 183 43-257 4-215 (344)
16 1jce_A ROD shape-determining p 99.8 4.6E-20 1.6E-24 211.7 18.1 285 737-1079 4-330 (344)
17 3h1q_A Ethanolamine utilizatio 99.7 5.4E-16 1.9E-20 171.6 17.8 117 87-206 64-181 (272)
18 2v7y_A Chaperone protein DNAK; 99.6 6E-15 2E-19 177.8 18.7 93 113-206 108-208 (509)
19 1dkg_D Molecular chaperone DNA 99.6 1.2E-14 4.2E-19 169.0 17.1 93 113-206 134-239 (383)
20 3qfu_A 78 kDa glucose-regulate 99.5 5.2E-13 1.8E-17 155.7 22.7 93 113-206 152-253 (394)
21 3h1q_A Ethanolamine utilizatio 99.4 6.3E-13 2.2E-17 146.9 14.3 241 737-1073 29-272 (272)
22 3i33_A Heat shock-related 70 k 99.4 2.4E-12 8.1E-17 150.7 18.5 93 113-206 157-261 (404)
23 2v7y_A Chaperone protein DNAK; 99.3 1.6E-11 5.4E-16 147.9 14.7 284 737-1074 3-349 (509)
24 1dkg_D Molecular chaperone DNA 99.2 1.8E-11 6.2E-16 142.2 12.1 226 807-1075 134-381 (383)
25 3qfu_A 78 kDa glucose-regulate 99.1 1.5E-10 5.2E-15 134.8 13.0 97 807-905 152-257 (394)
26 1yuw_A Heat shock cognate 71 k 99.1 1.3E-09 4.3E-14 132.5 21.2 92 114-206 139-240 (554)
27 2ych_A Competence protein PILM 99.1 3.5E-09 1.2E-13 122.5 21.9 93 130-256 153-252 (377)
28 2kho_A Heat shock protein 70; 99.1 1.2E-09 4.2E-14 133.9 17.8 92 114-206 135-239 (605)
29 4gni_A Putative heat shock pro 99.0 1.2E-08 4E-13 119.5 22.3 94 112-206 148-252 (409)
30 3d2f_A Heat shock protein homo 99.0 8E-09 2.7E-13 127.9 19.6 91 115-206 139-244 (675)
31 3i33_A Heat shock-related 70 k 98.9 3.3E-09 1.1E-13 123.9 11.5 97 807-905 157-265 (404)
32 4b9q_A Chaperone protein DNAK; 98.6 6.7E-07 2.3E-11 109.6 20.6 93 113-206 134-239 (605)
33 2kho_A Heat shock protein 70; 98.4 8.8E-07 3E-11 108.6 13.6 96 808-905 135-243 (605)
34 1yuw_A Heat shock cognate 71 k 98.4 2.3E-06 7.9E-11 103.8 16.3 94 809-904 140-243 (554)
35 4a2a_A Cell division protein F 98.4 2.4E-06 8E-11 99.9 14.1 94 127-254 167-265 (419)
36 4gni_A Putative heat shock pro 98.2 3.7E-06 1.3E-10 98.2 12.1 98 806-905 148-256 (409)
37 2fsj_A Hypothetical protein TA 98.2 5.9E-06 2E-10 94.2 13.3 164 738-905 23-240 (346)
38 2zgy_A Plasmid segregation pro 98.2 5.3E-06 1.8E-10 93.6 12.7 68 139-206 136-209 (320)
39 2ych_A Competence protein PILM 98.2 1.7E-05 5.8E-10 91.4 16.5 93 825-942 154-253 (377)
40 2fsj_A Hypothetical protein TA 98.2 8.2E-06 2.8E-10 93.1 12.7 159 45-206 24-236 (346)
41 4apw_A ALP12; actin-like prote 98.2 2.5E-06 8.5E-11 96.6 8.2 163 44-206 9-216 (329)
42 3d2f_A Heat shock protein homo 98.1 1.3E-05 4.4E-10 99.3 14.7 94 809-904 139-247 (675)
43 3js6_A Uncharacterized PARM pr 98.1 1.5E-05 5.3E-10 91.0 13.6 92 115-206 114-228 (355)
44 4b9q_A Chaperone protein DNAK; 97.8 8.7E-05 3E-09 90.9 13.7 96 808-905 135-243 (605)
45 2zgy_A Plasmid segregation pro 97.5 0.00057 2E-08 76.8 12.6 72 833-905 136-213 (320)
46 3js6_A Uncharacterized PARM pr 97.3 0.0029 9.8E-08 72.1 15.6 164 738-905 6-232 (355)
47 4apw_A ALP12; actin-like prote 97.3 0.0006 2.1E-08 77.0 9.7 167 737-904 8-219 (329)
48 4a2a_A Cell division protein F 96.3 0.0091 3.1E-07 69.5 9.5 95 821-940 167-266 (419)
49 2d0o_A DIOL dehydratase-reacti 96.0 0.058 2E-06 63.0 14.1 73 132-206 372-449 (610)
50 1nbw_A Glycerol dehydratase re 95.7 0.038 1.3E-06 64.8 10.9 55 150-206 392-451 (607)
51 1t6c_A Exopolyphosphatase; alp 91.7 0.73 2.5E-05 51.2 11.1 77 126-204 95-178 (315)
52 3mdq_A Exopolyphosphatase; str 91.2 1 3.6E-05 49.9 11.6 76 127-204 88-171 (315)
53 1t6c_A Exopolyphosphatase; alp 90.4 1.5 5.2E-05 48.6 12.0 74 821-898 96-177 (315)
54 3cer_A Possible exopolyphospha 89.6 0.74 2.5E-05 51.8 8.6 75 822-898 102-191 (343)
55 3cer_A Possible exopolyphospha 88.7 1.6 5.4E-05 49.1 10.6 77 128-204 102-192 (343)
56 3mdq_A Exopolyphosphatase; str 88.3 0.95 3.3E-05 50.3 8.3 71 822-896 89-168 (315)
57 3hi0_A Putative exopolyphospha 86.2 1.9 6.5E-05 51.2 9.8 75 126-202 98-178 (508)
58 1u6z_A Exopolyphosphatase; alp 85.8 1.1 3.9E-05 53.1 7.6 78 126-205 94-178 (513)
59 3hi0_A Putative exopolyphospha 85.4 4.5 0.00015 47.9 12.5 144 735-896 14-177 (508)
60 1u6z_A Exopolyphosphatase; alp 85.3 1.9 6.6E-05 51.2 9.2 74 821-898 95-176 (513)
61 4ehu_A Activator of 2-hydroxyi 84.0 0.42 1.4E-05 51.9 2.5 66 455-539 188-253 (276)
62 3aap_A Ectonucleoside triphosp 82.6 9.1 0.00031 43.0 12.8 36 162-197 140-177 (353)
63 3zx3_A Ectonucleoside triphosp 76.7 10 0.00034 44.0 10.9 107 90-196 85-217 (452)
64 3cet_A Conserved archaeal prot 74.3 2.1 7E-05 47.4 4.0 26 162-187 127-152 (334)
65 2d0o_A DIOL dehydratase-reacti 73.1 6.1 0.00021 46.4 7.7 74 844-941 390-468 (610)
66 1nbw_A Glycerol dehydratase re 72.1 6.4 0.00022 46.4 7.6 74 844-941 392-470 (607)
67 3aap_A Ectonucleoside triphosp 70.2 5.6 0.00019 44.7 6.5 34 856-889 140-175 (353)
68 3djc_A Type III pantothenate k 67.3 26 0.00088 37.6 10.7 15 160-174 123-137 (266)
69 3cet_A Conserved archaeal prot 66.7 3.5 0.00012 45.6 3.7 25 856-880 127-151 (334)
70 2h3g_X Biosynthetic protein; p 66.6 21 0.00071 38.4 9.8 17 162-179 123-139 (268)
71 2h3g_X Biosynthetic protein; p 65.9 27 0.00093 37.4 10.6 18 739-756 3-20 (268)
72 3djc_A Type III pantothenate k 65.8 24 0.00084 37.8 10.2 19 738-756 4-22 (266)
73 3cj1_A Ectonucleoside triphosp 63.7 22 0.00076 41.2 10.0 36 161-196 189-225 (456)
74 3bex_A Type III pantothenate k 58.8 56 0.0019 34.5 11.4 19 738-756 5-23 (249)
75 2ews_A Pantothenate kinase; PA 56.4 6.3 0.00022 42.9 3.4 71 455-539 215-287 (287)
76 1zc6_A Probable N-acetylglucos 48.9 1.8E+02 0.006 31.2 13.8 89 90-185 50-145 (305)
77 2qm1_A Glucokinase; alpha-beta 46.5 70 0.0024 34.7 10.2 53 133-187 100-159 (326)
78 2qm1_A Glucokinase; alpha-beta 46.3 71 0.0024 34.7 10.1 129 737-881 7-159 (326)
79 1zbs_A Hypothetical protein PG 41.2 1.5E+02 0.0053 31.5 11.7 69 116-185 62-132 (291)
80 3bex_A Type III pantothenate k 40.3 2E+02 0.0068 30.2 12.0 26 161-187 121-146 (249)
81 3zx3_A Ectonucleoside triphosp 40.0 53 0.0018 38.0 7.9 22 856-877 181-202 (452)
82 1hux_A Activator of (R)-2-hydr 37.3 8.4 0.00029 41.5 0.6 48 476-540 209-256 (270)
83 4ehu_A Activator of 2-hydroxyi 36.2 1.3E+02 0.0044 31.7 10.0 61 146-206 74-139 (276)
84 2i7n_A Pantothenate kinase 1; 35.4 19 0.00066 40.3 3.2 73 455-538 284-358 (360)
85 1zc6_A Probable N-acetylglucos 34.2 2.4E+02 0.0082 30.2 11.9 127 737-879 12-145 (305)
86 3cj1_A Ectonucleoside triphosp 33.1 66 0.0022 37.3 7.3 23 855-877 189-211 (456)
87 2ch5_A NAGK protein; transfera 33.0 4.8E+02 0.016 28.1 14.4 84 90-175 46-134 (347)
88 1zbs_A Hypothetical protein PG 32.5 1.7E+02 0.0059 31.1 10.3 128 738-879 2-132 (291)
89 2f9w_A Pantothenate kinase; CO 32.5 1.3E+02 0.0043 32.3 8.9 17 738-754 25-41 (271)
90 1saz_A Probable butyrate kinas 31.5 2.7E+02 0.0093 31.0 12.1 56 824-881 109-200 (381)
91 3vgl_A Glucokinase; ROK family 29.8 1.8E+02 0.0063 31.4 10.1 125 737-881 3-147 (321)
92 4htl_A Beta-glucoside kinase; 27.4 58 0.002 35.1 5.3 66 456-539 225-290 (297)
93 3vgl_A Glucokinase; ROK family 26.1 2.4E+02 0.0084 30.4 10.2 53 133-187 88-147 (321)
94 2yhw_A Bifunctional UDP-N-acet 25.6 2E+02 0.0068 31.4 9.4 126 737-881 31-182 (343)
95 4db3_A Glcnac kinase, N-acetyl 25.3 60 0.0021 35.6 5.0 69 456-539 257-325 (327)
96 1hux_A Activator of (R)-2-hydr 24.9 2.6E+02 0.0088 29.5 9.8 24 856-879 96-119 (270)
97 2yhw_A Bifunctional UDP-N-acet 23.9 2.3E+02 0.008 30.8 9.6 51 135-187 125-182 (343)
98 2hoe_A N-acetylglucosamine kin 23.9 4.3E+02 0.015 29.2 12.0 130 737-881 88-237 (380)
99 3vov_A Glucokinase, hexokinase 22.6 4.9E+02 0.017 27.7 11.7 53 133-187 90-149 (302)
100 2aa4_A Mannac kinase, putative 22.5 1.8E+02 0.0062 30.7 8.1 132 738-882 3-147 (289)
101 2e2o_A Hexokinase; acetate and 22.1 4.2E+02 0.014 27.9 11.1 81 90-183 42-123 (299)
102 2e2o_A Hexokinase; acetate and 22.1 4.5E+02 0.015 27.7 11.3 119 738-877 4-123 (299)
103 4db3_A Glcnac kinase, N-acetyl 21.9 3.8E+02 0.013 28.9 10.8 126 737-881 25-171 (327)
104 1z05_A Transcriptional regulat 20.8 2.8E+02 0.0096 31.4 9.7 128 737-881 109-259 (429)
105 2ch5_A NAGK protein; transfera 20.4 6.3E+02 0.022 27.1 12.3 130 737-877 7-142 (347)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-66 Score=613.81 Aligned_cols=405 Identities=19% Similarity=0.231 Sum_probs=302.0
Q ss_pred CCCCCCeEEEecCCceeEEeeecCcccccccccceeccCCccccceeccC------------------chhhHHHHHHHH
Q psy9135 38 GSFQPKGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYK------------------DADDLYGLLIEF 99 (1107)
Q Consensus 38 ~~~~~~~iViD~GS~~~K~G~age~~P~~i~ps~v~~~~~~~~~~~~~~~------------------~~~~~~~~le~i 99 (1107)
|.++.++||||+||++||+||+|++.|+.++||+||+++....+..++|+ +.+.+|+++|.+
T Consensus 19 ggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~i 98 (498)
T 3qb0_A 19 GGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQ 98 (498)
T ss_dssp CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCSSCCEECCTTGGGSCCTTEEEEESEETTEESCHHHHHHH
T ss_pred CCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCCCccEEEecHHHhcCcCceEEeccCcCCEEccHHHHHHH
Confidence 46788899999999999999999999999999999998754223334443 445679999999
Q ss_pred HHHHHhhccccCCCCC-eEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCceEEEEEeCCCceEEEE
Q psy9135 100 IRKIFFKYFVTSPKDK-RIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGLVLDIGYSEATLLP 178 (1107)
Q Consensus 100 ~~~~~~~~L~~~~~~~-~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~tglVVDiG~~~T~V~P 178 (1107)
|+|+|++.|++++.++ |||||||+++++..|++|+|++||+|++|+++++.+++|++|++|++||||||+|++.|+|+|
T Consensus 99 w~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g~T~vvP 178 (498)
T 3qb0_A 99 WQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSP 178 (498)
T ss_dssp HHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSSCEEEEE
T ss_pred HHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCCcEEEEE
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCEecccceEEecccHHHHHHHHHHhhhhhhhhhhhhHHHHhhcCCC----------------CCCccccccccCC-C
Q psy9135 179 VYEGVPVLCAWKDLSLGGQSVEAHIRRGQSVESHIRSLLIDEIKALENP----------------DPYIVTVEDVENL-S 241 (1107)
Q Consensus 179 V~dG~vl~~~~~~~~iGG~~lt~~L~~l~~~~~~~~~~~~~~L~~~~~~----------------~~~~~~~~~~~~~-~ 241 (1107)
|++|+++.++++++++||+++|++|.++ |++.+.. +++..+.+...+. +
T Consensus 179 I~~G~~l~~ai~rl~vgG~~lt~~L~~l--------------L~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~ 244 (498)
T 3qb0_A 179 IVDGMTLSKSTRRNFIAGKFINHLIKKA--------------LEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANN 244 (498)
T ss_dssp EETTEECGGGCEEESCSHHHHHHHHHHH--------------TTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHH
T ss_pred EeCCEEccccceeccccHHHHHHHHHHH--------------HHhccccchhhhcccccccccccCCCccCccHHHHHHH
Confidence 9999999999999999999999999999 5443211 1111111111112 3
Q ss_pred HHHHHHHHHhceeeccc-hhHHHHHhcCCCCCCCCCeeeecCCCcccccCccc-hhhhhhhhcchhhhhhhHHHHHHhhh
Q psy9135 242 DSIIEDIKVCSCFVTTM-ERSAEIAAKNPDHKYPSGFMYPLKNGKKIPVSGHI-RETAFEVLFELDLDMLNIATIILDSL 319 (1107)
Q Consensus 242 ~~~~e~iKe~~c~v~~~-~~~~~~~~~~~~~~~~~~~~y~Lpd~~~i~i~~~~-r~~~~e~lF~~~~~~~~~~~~~~~~~ 319 (1107)
..++++|||++|||+.. ..+.+..... ....+.|+||||+.|.+ |.+ |+.++|.||+|........+
T Consensus 245 ~~iv~~iKE~~c~Va~~~~~~~~~~~~~----~~~~~~yeLPDG~~i~l-g~E~Rf~~pE~LF~P~~~g~~~~~------ 313 (498)
T 3qb0_A 245 RGFFQECKETLCHICPTKTLEETKTELS----STAKRSIESPWNEEIVF-DNETRYGFAEELFLPKEDDIPANW------ 313 (498)
T ss_dssp HTHHHHHHHHTCCCCSSCHHHHHHHHHH----TCCCEEEECSSSCEEEE-CHHHHHHHHHTTTSCCGGGSCTTS------
T ss_pred HHHHHHHHHhhEEecCCccHhHHhhhcc----CcCceEEECCCCCEEEE-CchHhhhCchhhCCHhHcCCcccc------
Confidence 45899999999999974 2222211111 14578999999999999 566 99999999999862100000
Q ss_pred hhcccCCCccccccccccccccCCCcchhhhccCCcccccccchhccccccCCccchhhhhhcccccccccccchhhccc
Q psy9135 320 LSVASSDGREETQYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYNKRAIQ 399 (1107)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 399 (1107)
..+.+
T Consensus 314 --~~~~~------------------------------------------------------------------------- 318 (498)
T 3qb0_A 314 --PRSNS------------------------------------------------------------------------- 318 (498)
T ss_dssp --CCCSS-------------------------------------------------------------------------
T ss_pred --ccccc-------------------------------------------------------------------------
Confidence 00000
Q ss_pred cccccCCCCCCCcccccccCCCCCCCCCCC---cccccCCccccccccc---ccC--------------------CCCCC
Q psy9135 400 KDVYLNNNVIPDWCNLSVLGTDLKKSVNPY---LHFPVSGHIRETAFEV---LFE--------------------LDLDM 453 (1107)
Q Consensus 400 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~er~~~pE~---lF~--------------------p~~~~ 453 (1107)
....+|.+.....++.+...... ........|.+..||. +|+ ...+.
T Consensus 319 -------~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (498)
T 3qb0_A 319 -------GVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNEL 391 (498)
T ss_dssp -------SCCCCCSCCCCCCCBCC-----------------------------------------------------CCS
T ss_pred -------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccC
Confidence 00011111111111101000000 0000001222223322 121 12367
Q ss_pred CCHHHHHHHHHhccCccchhhhhccEEEEcCCCCccChHHHHHHHHHhhcCCCCccccccceeEEEEcCC--CCCccccc
Q psy9135 454 LNIATIILDSLLKTGRDMKKPLAENILLTGGTAMTPGLKYRLLQELRTLIESPPYKDKLFIKNFKFHEFP--AKENYVAW 531 (1107)
Q Consensus 454 ~gL~e~I~~sI~~~~~d~r~~L~~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~--~~~~~~aW 531 (1107)
.||+++|.+||++||.|+|+.|++||||+||+|++|||.+||++||+.+.|. .+++|++++ .+|.+++|
T Consensus 392 ~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p~---------~~i~v~~~~~~~er~~s~W 462 (498)
T 3qb0_A 392 IGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPS---------LKFRILTTGHTIERQYQSW 462 (498)
T ss_dssp CCHHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSTT---------SCCCEECCSCTGGGGSHHH
T ss_pred CCchHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCCC---------CeeEEEcCCCCCccCccEE
Confidence 8999999999999999999999999999999999999999999999999982 378898762 38999999
Q ss_pred hhHHhhcCCcccccccccHHHHHhcCC
Q psy9135 532 LGGAIFAATESYNKRAIQKDAYLNNNM 558 (1107)
Q Consensus 532 ~Ggsilasl~~f~~~~ITk~eYeE~G~ 558 (1107)
+||||||++++|+++||||+||+|+|+
T Consensus 463 iGgsilasl~~f~~~witk~EY~E~G~ 489 (498)
T 3qb0_A 463 LGGSILTSLGTFHQLWVGKKEYEEVGV 489 (498)
T ss_dssp HHHHHHHTCHHHHHTSEEHHHHHTTCC
T ss_pred cccEEEecCcchhceEEEHHHHhhhCc
Confidence 999999999999999999999999997
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-65 Score=602.35 Aligned_cols=344 Identities=20% Similarity=0.335 Sum_probs=278.9
Q ss_pred CCCeEEEecCCceeEEeeecCcccccccccceeccCCcc----------------------------ccceeccCch---
Q psy9135 41 QPKGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNK----------------------------LRNLYEYKDA--- 89 (1107)
Q Consensus 41 ~~~~iViD~GS~~~K~G~age~~P~~i~ps~v~~~~~~~----------------------------~~~~~~~~~~--- 89 (1107)
+.++|||||||++||+||||++.|+++|||+||+++... .++.++|+++
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 83 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKK 83 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHT
T ss_pred CCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhC
Confidence 568999999999999999999999999999999987430 0245555533
Q ss_pred ---------------hhHHHHHHHHHHHHHhhccccCCCCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhh
Q psy9135 90 ---------------DDLYGLLIEFIRKIFFKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLV 154 (1107)
Q Consensus 90 ---------------~~~~~~le~i~~~~~~~~L~~~~~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~ll 154 (1107)
+.+|+++|++|+|+|++.|++++.+||+|||||+++++..|++|+|++||+|++|+++++.++++
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vl 163 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVL 163 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHH
Confidence 34699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCC--------CceEEEEEeCCCceEEEEeecCEecccceEEecccHHHHHHHHHHhhhhhhhhhhhhHHHHhhcCC
Q psy9135 155 SLCTLG--------VNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRGQSVESHIRSLLIDEIKALEN 226 (1107)
Q Consensus 155 s~y~~g--------~~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l~~~~~~~~~~~~~~L~~~~~ 226 (1107)
|+|++| .+||||||+|++.|+|+||++|+++.++++++++||+++|++|.++ |+++++
T Consensus 164 a~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~l--------------L~~~~~ 229 (427)
T 3dwl_A 164 ALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSL--------------LRDRNE 229 (427)
T ss_dssp HHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHT--------------TC----
T ss_pred HHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHH--------------HHHcCC
Confidence 999998 6899999999999999999999999999999999999999999999 555543
Q ss_pred CCCCccccccccCCCHHHHHHHHHhceeeccch-hHHHHHhcCCCCCCCCCeeeec--CCCcccccCccchhhhhhhhcc
Q psy9135 227 PDPYIVTVEDVENLSDSIIEDIKVCSCFVTTME-RSAEIAAKNPDHKYPSGFMYPL--KNGKKIPVSGHIRETAFEVLFE 303 (1107)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~e~iKe~~c~v~~~~-~~~~~~~~~~~~~~~~~~~y~L--pd~~~i~i~~~~r~~~~e~lF~ 303 (1107)
. ..+.+++|+|||++|||+.+. .+.+...... ...+.|+| |||..
T Consensus 230 ~-----------~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~----~~~~~~~l~~~~g~~----------------- 277 (427)
T 3dwl_A 230 P-----------DSSLKTAERIKEECCYVCPDIVKEFSRFDREP----DRYLKYASESITGHS----------------- 277 (427)
T ss_dssp ---------------CHHHHHHHHHHCCCCSCHHHHHHHTTC---------CCBCC------------------------
T ss_pred C-----------chhHHHHHHHHHhcCcccCCHHHHHHHhhcCc----cccceeEeeCCCCCe-----------------
Confidence 2 245789999999999999643 2222111100 01122322 22221
Q ss_pred hhhhhhhHHHHHHhhhhhcccCCCccccccccccccccCCCcchhhhccCCcccccccchhccccccCCccchhhhhhcc
Q psy9135 304 LDLDMLNIATIILDSLLSVASSDGREETQYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLG 383 (1107)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (1107)
T Consensus 278 -------------------------------------------------------------------------------- 277 (427)
T 3dwl_A 278 -------------------------------------------------------------------------------- 277 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccchhhccccccccCCCCCCCcccccccCCCCCCCCCCCcccccCCcccccccccccCC---CCC-CCCHHHH
Q psy9135 384 GAIFAATESYNKRAIQKDVYLNNNVIPDWCNLSVLGTDLKKSVNPYLHFPVSGHIRETAFEVLFEL---DLD-MLNIATI 459 (1107)
Q Consensus 384 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~pE~lF~p---~~~-~~gL~e~ 459 (1107)
+.+.++.|||++||+||+| +.+ ..||+++
T Consensus 278 -----------------------------------------------~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~ 310 (427)
T 3dwl_A 278 -----------------------------------------------TTIDVGFERFLAPEIFFNPEIASSDFLTPLPEL 310 (427)
T ss_dssp -------------------------------------------------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHH
T ss_pred -----------------------------------------------eEEEEChHhhhChhhccCchhcCCccCCCccHH
Confidence 1233588999999999999 456 4899999
Q ss_pred HHHHHhccCccchhhhhccEEEEcCCCCccChHHHHHHHHHhhcCCCCcccc------ccceeEEEEcCCCCCccccchh
Q psy9135 460 ILDSLLKTGRDMKKPLAENILLTGGTAMTPGLKYRLLQELRTLIESPPYKDK------LFIKNFKFHEFPAKENYVAWLG 533 (1107)
Q Consensus 460 I~~sI~~~~~d~r~~L~~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~~~~~------~~~~~v~v~~~~~~~~~~aW~G 533 (1107)
|.++|++||+|+|++|++|||||||+|++|||.+||++||+.+.+....... ....+++|.+++ +|.|++|+|
T Consensus 311 i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~-~r~~s~WiG 389 (427)
T 3dwl_A 311 VDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHK-RQRNAVWFG 389 (427)
T ss_dssp HHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCT-TCTTHHHHH
T ss_pred HHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCC-ccccceecC
Confidence 9999999999999999999999999999999999999999999863210000 113478999877 999999999
Q ss_pred HHhhcCCcccccccccHHHHHhcCC
Q psy9135 534 GAIFAATESYNKRAIQKDAYLNNNM 558 (1107)
Q Consensus 534 gsilasl~~f~~~~ITk~eYeE~G~ 558 (1107)
|||||++++|+++||||+||+|+|+
T Consensus 390 GSilasl~~f~~~witk~EYeE~G~ 414 (427)
T 3dwl_A 390 GSLLAQTPEFGSYCHTKADYEEYGA 414 (427)
T ss_dssp HHHHHHSTTHHHHSEEHHHHHHSCG
T ss_pred ceeeccccchhheeEEHHHHhhhCh
Confidence 9999999999999999999999998
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.3e-63 Score=609.78 Aligned_cols=368 Identities=16% Similarity=0.163 Sum_probs=254.5
Q ss_pred hhhHHHHHHHHHHHHHhhccccCCCC---CeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCceEE
Q psy9135 89 ADDLYGLLIEFIRKIFFKYFVTSPKD---KRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGL 165 (1107)
Q Consensus 89 ~~~~~~~le~i~~~~~~~~L~~~~~~---~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~tgl 165 (1107)
.+.+|++||.+|+|+|.+.|++++++ ||||||||+++++.+|++|+|+|||+|+||+++++++++||+||+|++|||
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tgl 249 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTC 249 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEE
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceE
Confidence 56789999999999999999998866 999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceEEEEeecCEecccceEEecccHHHHHHHHHHhhhhhhhhhhhhHHHHhhcCCCCCCccccccccCCCHHHH
Q psy9135 166 VLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSII 245 (1107)
Q Consensus 166 VVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1107)
|||+|++.|+|+||+||+++.++++++++||+++|++|.++ |+.++.+..... .....+..++
T Consensus 250 VVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~l--------------L~~~~~~~~~~~---~~~~~d~~~v 312 (593)
T 4fo0_A 250 IVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWL--------------MQRAGFPYRECQ---LTNKMDCLLL 312 (593)
T ss_dssp EEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHH--------------HHHTTCSCTTCC---TTCHHHHHHH
T ss_pred EEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHH--------------HHhcCCCccccc---cccchhHHHH
Confidence 99999999999999999999999999999999999999999 777664432110 0123467899
Q ss_pred HHHHHhceeeccchhHHHHHhcCCCCCCCCCeeeecCCCccc----ccCccchhhhhhhhcchhhhhhhHHHHHHhhhhh
Q psy9135 246 EDIKVCSCFVTTMERSAEIAAKNPDHKYPSGFMYPLKNGKKI----PVSGHIRETAFEVLFELDLDMLNIATIILDSLLS 321 (1107)
Q Consensus 246 e~iKe~~c~v~~~~~~~~~~~~~~~~~~~~~~~y~Lpd~~~i----~i~~~~r~~~~e~lF~~~~~~~~~~~~~~~~~~~ 321 (1107)
++|||++|||+.+....+ .....+.+|++... .+ +.++..+++.+|+|........
T Consensus 313 ~~iKe~~c~v~~d~~~~~----------~~~~~~~~p~~~~~~~~~~~-~~E~~~~p~~lf~p~~~~~~~~--------- 372 (593)
T 4fo0_A 313 QHLKETFCHLDQDISGLQ----------DHEFQIRHPDSPALLYQFRL-GDEKLQAPMALFYPATFGIVGQ--------- 372 (593)
T ss_dssp HHHHHHHCBCCTTCCSCE----------EEEEEECCTTSCEEEEEEEE-CTHHHHHHHTTTSGGGGCCCSS---------
T ss_pred HHHHHHhcccccchHHhh----------hhhhhcccCCCCceeeEEec-cchhhcCchhhcChhhhccccc---------
Confidence 999999999996432211 22345566666543 23 6678899999999986321000
Q ss_pred cccCCCccccccccccccccCCCcchhhhccCCcccccccchhccccccCCccchhhhhhcccccccccccchhhccccc
Q psy9135 322 VASSDGREETQYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYNKRAIQKD 401 (1107)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 401 (1107)
.. . ..........+++.....+... ........
T Consensus 373 -------~~--------------~---------------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--- 405 (593)
T 4fo0_A 373 -------KM--------------T---------------TLQHRSQGDPEDPHDEHYLLAT--------QSKQEQSA--- 405 (593)
T ss_dssp -------CC--------------E---------------EECC-------------------------------------
T ss_pred -------cc--------------c---------------hhhhhcccCcccchhhhhhhhc--------ccchhhhh---
Confidence 00 0 0000000000111100000000 00000000
Q ss_pred cccCCCCCCCcccccccCCCCCCCCCCCcccccCCcccccccccccCCCC------------------------------
Q psy9135 402 VYLNNNVIPDWCNLSVLGTDLKKSVNPYLHFPVSGHIRETAFEVLFELDL------------------------------ 451 (1107)
Q Consensus 402 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~pE~lF~p~~------------------------------ 451 (1107)
......+....|+++...++.+|+.+||.+|+|..
T Consensus 406 ---------------~~~~~~~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (593)
T 4fo0_A 406 ---------------KATADRKSASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAI 470 (593)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------hcccccccccCCCCcccccccccccCchhccCccccccccccccccccccccccccccccccccc
Confidence 00001112233455566678999999999999831
Q ss_pred -----CCCCHHHHHHHHHhccC-ccchhhhhccEEEEcCCCCccChHHHHHHHHHhhcCCCCccccccceeEEEEcCCC-
Q psy9135 452 -----DMLNIATIILDSLLKTG-RDMKKPLAENILLTGGTAMTPGLKYRLLQELRTLIESPPYKDKLFIKNFKFHEFPA- 524 (1107)
Q Consensus 452 -----~~~gL~e~I~~sI~~~~-~d~r~~L~~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~~- 524 (1107)
+..||+++|.+||.+|| .|+|+.|++|||||||+|++|||.+||++||+.+.|.. +. ....+++|+++|.
T Consensus 471 ~~~~~~~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~-~~--~~~~~v~v~~~p~~ 547 (593)
T 4fo0_A 471 SLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPS-FR--RIIENVDVITRPKD 547 (593)
T ss_dssp CHHHHSCCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHH-HH--HHSSCCEEESSGGG
T ss_pred ccccccCCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcch-hc--cccceEEEECCCCC
Confidence 35799999999999998 59999999999999999999999999999999998852 10 0123689998763
Q ss_pred -CCccccchhHHhhcCCcccccccccHHHHHhcCC
Q psy9135 525 -KENYVAWLGGAIFAATESYNKRAIQKDAYLNNNM 558 (1107)
Q Consensus 525 -~~~~~aW~Ggsilasl~~f~~~~ITk~eYeE~G~ 558 (1107)
||++++|+||||||+|++|+++||||+||+|+|+
T Consensus 548 ~d~~~~aW~GgSilasL~~f~~~wItk~EYeE~G~ 582 (593)
T 4fo0_A 548 MDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGV 582 (593)
T ss_dssp CCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTT
T ss_pred CCCceeeehhhHHHhcCccHHHeeECHHHHHhhCc
Confidence 7999999999999999999999999999999998
No 4
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-61 Score=572.49 Aligned_cols=343 Identities=16% Similarity=0.188 Sum_probs=287.3
Q ss_pred cccceEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeec------------------CCHHhhHHHHHHHHH
Q psy9135 734 TLKTGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEY------------------KDADDLYGLLIEFIR 795 (1107)
Q Consensus 734 ~~~~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~------------------~~~~~~~d~le~i~~ 795 (1107)
++.++||||+||++||+||+|++.|+.++||++|+++....+..++| +|.+.|||+++++|+
T Consensus 21 de~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~ 100 (498)
T 3qb0_A 21 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQ 100 (498)
T ss_dssp CCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCSSCCEECCTTGGGSCCTTEEEEESEETTEESCHHHHHHHHH
T ss_pred CCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCCCccEEEecHHHhcCcCceEEeccCcCCEEccHHHHHHHHH
Confidence 45579999999999999999999999999999999865422222322 367788999999999
Q ss_pred HHHHhccccCCCCc-eEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCceEEEEEcCCCceEEEEEE
Q psy9135 796 KIFFKYFVTSPKDK-RIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGLVLDIGYSEATLLPVY 874 (1107)
Q Consensus 796 ~~~~~~L~~~~~~~-~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~tglVVDiG~~~T~v~PV~ 874 (1107)
|+|++.|+++|+++ ||||+||+++++..|++++|++||+|++|+++++.+++||+||+|++||+|||+|++.|+|+||+
T Consensus 101 ~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g~T~vvPI~ 180 (498)
T 3qb0_A 101 WALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIV 180 (498)
T ss_dssp HHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSSCEEEEEEE
T ss_pred HHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCCcEEEEEEe
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEeeccceEEEeccchHHHHHHHHHHHHhhccc----CC---C---CCCCccchhhh-hc-c-cHHHHHHHHHhceeec
Q psy9135 875 EGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKA----LE---N---PDPYIVTVEDV-EN-L-SDSIIEDIKVCSCFVT 941 (1107)
Q Consensus 875 dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~----~~---~---~~~~~~~~~~~-~~-l-~~~~v~~iKe~~c~v~ 941 (1107)
+|++++++++++++| |+++|++|.++|++++.. ++ + ...+.++..+. .. . ..+++++|||++|||+
T Consensus 181 ~G~~l~~ai~rl~vg-G~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va 259 (498)
T 3qb0_A 181 DGMTLSKSTRRNFIA-GKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHIC 259 (498)
T ss_dssp TTEECGGGCEEESCS-HHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCC
T ss_pred CCEEccccceecccc-HHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEec
Confidence 999999999999999 999999999999875410 00 0 00011111000 00 1 2348999999999999
Q ss_pred cc-hHHHHHHhcCCCCCCCCceEEeCCCCCEEEecccc-cccccccccCCC---C-------------------------
Q psy9135 942 TM-ERSAEIAAKNPDHKYPSGFMYPLKNGKKIPVSGHI-RETAFEVLFELD---L------------------------- 991 (1107)
Q Consensus 942 ~~-~~~~~~~~~~~~~~~~~~~~y~Lpdg~~i~l~~~e-rf~~~E~LF~P~---~------------------------- 991 (1107)
.+ ..+.+..... ....+.|+||||+.|.+ |.| ||++||+||+|+ .
T Consensus 260 ~~~~~~~~~~~~~----~~~~~~yeLPDG~~i~l-g~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 334 (498)
T 3qb0_A 260 PTKTLEETKTELS----STAKRSIESPWNEEIVF-DNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRT 334 (498)
T ss_dssp SSCHHHHHHHHHH----TCCCEEEECSSSCEEEE-CHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBC
T ss_pred CCccHhHHhhhcc----CcCceEEECCCCCEEEE-CchHhhhCchhhCCHhHcCCccccccccccccccccccccccccc
Confidence 86 2222211110 14568999999999999 899 999999999995 1
Q ss_pred -------------------------------------------------------CCCcHHHHHHHHHHcCCcccccccC
Q psy9135 992 -------------------------------------------------------DMLNIATIILDSLLSVASSDGREET 1016 (1107)
Q Consensus 992 -------------------------------------------------------~~~gL~~~I~~sI~~~~~~d~r~~L 1016 (1107)
+..||+++|.+||++|| +|+|+.|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd-~d~r~~L 413 (498)
T 3qb0_A 335 KPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSD-VDLRATL 413 (498)
T ss_dssp C-----------------------------------------------------CCSCCHHHHHHHHHHTSC-TTTHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCC-HHHHHHH
Confidence 45789999999999999 9999998
Q ss_pred -------------CCCCCCCCccchHHHHHhhhhCCCcccccccceeeEEEEeC--CCCcceehhhhHHHhhcCCCccce
Q psy9135 1017 -------------QYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEF--PAKENYVAWLGGAIFAATESYNKR 1081 (1107)
Q Consensus 1017 -------------~Gf~~~~~~~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~~~--~~~~~~~aW~GgSIlasl~~f~~~ 1081 (1107)
||| .+||++||+.+.| . .+++|..+ +++|.+++|+||||||+|++|+++
T Consensus 414 ~~nIvLsGGst~~pGf------~~Rl~~El~~l~p-~---------~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~ 477 (498)
T 3qb0_A 414 AHNVVLTGGTSSIPGL------SDRLMTELNKILP-S---------LKFRILTTGHTIERQYQSWLGGSILTSLGTFHQL 477 (498)
T ss_dssp HTTEEEESGGGGSTTH------HHHHHHHHHHHST-T---------SCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHT
T ss_pred hcCEEEeCCccCchhH------HHHHHHHHHHhCC-C---------CeeEEEcCCCCCccCccEEcccEEEecCcchhce
Confidence 999 9999999999988 2 24677643 268999999999999999999999
Q ss_pred eeeHHHHhhcCC--ccceec
Q psy9135 1082 AIQKDVYLNNNV--IPDWCN 1099 (1107)
Q Consensus 1082 ~ITk~eYeE~G~--i~d~~~ 1099 (1107)
||||+||+|+|+ |++++|
T Consensus 478 witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 478 WVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp SEEHHHHHTTCCHHHHHHTT
T ss_pred EEEHHHHhhhCcHhhccccC
Confidence 999999999997 888766
No 5
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.8e-61 Score=563.27 Aligned_cols=337 Identities=21% Similarity=0.315 Sum_probs=274.4
Q ss_pred ccceEEEecCcceEEEeccCCCCccEEEecceeccCCC----------------------C------ccceeecC-----
Q psy9135 735 LKTGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTN----------------------K------LRNLYEYK----- 781 (1107)
Q Consensus 735 ~~~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~----------------------~------~~~~~~~~----- 781 (1107)
..++||||+||++||+|||||+.|+.+|||++|+++.. . .++.++|+
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 83 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKK 83 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHT
T ss_pred CCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhC
Confidence 34789999999999999999999999999999998743 0 02445543
Q ss_pred -------------CHHhhHHHHHHHHHHHHHhccccCCCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchh
Q psy9135 782 -------------DADDLYGLLIEFIRKIFFKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLV 848 (1107)
Q Consensus 782 -------------~~~~~~d~le~i~~~~~~~~L~~~~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~l 848 (1107)
|.+.|||.+|++|+|+|++.|+++|+++||+++||+++++..|++++|++||+|++|+++++.++++
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vl 163 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVL 163 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHH
Confidence 5567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccC--------CceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchh
Q psy9135 849 SLCTLG--------VNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVE 920 (1107)
Q Consensus 849 alya~g--------~~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~ 920 (1107)
|+|++| ++||+|||+|++.|+|+||++|++++++++++++| |+++|++|.++|++++. .
T Consensus 164 a~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~g-G~~lt~~L~~lL~~~~~--------~---- 230 (427)
T 3dwl_A 164 ALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLA-GRDVTYFVQSLLRDRNE--------P---- 230 (427)
T ss_dssp HHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCC-HHHHHHHHHHTTC-----------------
T ss_pred HHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheecccc-HHHHHHHHHHHHHHcCC--------C----
Confidence 999998 68999999999999999999999999999999999 99999999999988761 1
Q ss_pred hhhcccHHHHHHHHHhceeeccchHHHHHHhcCCCCCCCCceEEeC--CCCC--EEEecccccccccccccCCC---CC-
Q psy9135 921 DVENLSDSIIEDIKVCSCFVTTMERSAEIAAKNPDHKYPSGFMYPL--KNGK--KIPVSGHIRETAFEVLFELD---LD- 992 (1107)
Q Consensus 921 ~~~~l~~~~v~~iKe~~c~v~~~~~~~~~~~~~~~~~~~~~~~y~L--pdg~--~i~l~~~erf~~~E~LF~P~---~~- 992 (1107)
..+.+++++|||++|||+.+... +....... + ...+.|++ |||+ .+.+ +.|||++||+||+|+ .+
T Consensus 231 ---~~~~~~~~~IKe~~cyv~~d~~~-e~~~~~~~-~-~~~~~~~l~~~~g~~~~i~i-g~erf~~pE~LF~P~~~g~~~ 303 (427)
T 3dwl_A 231 ---DSSLKTAERIKEECCYVCPDIVK-EFSRFDRE-P-DRYLKYASESITGHSTTIDV-GFERFLAPEIFFNPEIASSDF 303 (427)
T ss_dssp ------CHHHHHHHHHHCCCCSCHHH-HHHHTTC-------CCBCC---------CBC-CTHHHHSGGGGTCGGGTCSSC
T ss_pred ---chhHHHHHHHHHhcCcccCCHHH-HHHHhhcC-c-cccceeEeeCCCCCeeEEEE-ChHhhhChhhccCchhcCCcc
Confidence 12235999999999999987633 33222111 1 22466888 8997 7888 899999999999995 34
Q ss_pred CCcHHHHHHHHHHcCCcccccccC-------------CCCCCCCCccchHHHHHhhhhCCCcccccc------cceeeEE
Q psy9135 993 MLNIATIILDSLLSVASSDGREET-------------QYFPFRCWVNTRTPEKLCCLVGWSNICCYK------LFIKNFK 1053 (1107)
Q Consensus 993 ~~gL~~~I~~sI~~~~~~d~r~~L-------------~Gf~~~~~~~eRL~~EL~~l~p~~~~~~~~------~~~~~~~ 1053 (1107)
..+|+++|.++|++|| +|+|+.| ||| .+||++||++++| ....... -...+++
T Consensus 304 ~~gI~~~i~~sI~~c~-~dlr~~L~~nIvLtGG~sl~~G~------~~RL~~El~~l~~-~~~~~~~~~~~~~p~~~~vk 375 (427)
T 3dwl_A 304 LTPLPELVDNVVQSSP-IDVRKGLYKNIVLSGGSTLFKNF------GNRLQRDLKRIVD-ERIHRSEMLSGAKSGGVDVN 375 (427)
T ss_dssp CSCHHHHHHHHHHTSC-HHHHHHHHHCEEEESGGGCSTTT------THHHHHHHHHHHT-TC-------------CCCCC
T ss_pred CCCccHHHHHHHHhCC-HHHHHHHhCCEEEEccCcCCCCh------HHHHHHHHHHhhh-hhccccccccccCCCceeEE
Confidence 4799999999999999 9999998 888 9999999999986 2111000 0112466
Q ss_pred EEeCCCCcceehhhhHHHhhcCCCccceeeeHHHHhhcCC-ccceecc
Q psy9135 1054 FHEFPAKENYVAWLGGAIFAATESYNKRAIQKDVYLNNNV-IPDWCNL 1100 (1107)
Q Consensus 1054 v~~~~~~~~~~aW~GgSIlasl~~f~~~~ITk~eYeE~G~-i~d~~~~ 1100 (1107)
|. .+++|+|++|+||||||++++|+++||||+||+|+|+ |++++++
T Consensus 376 v~-~~~~r~~s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 376 VI-SHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp EE-CCTTCTTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred Ee-cCCccccceecCceeeccccchhheeEEHHHHhhhChHhheeccc
Confidence 75 5669999999999999999999999999999999996 8888765
No 6
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=2.7e-59 Score=547.45 Aligned_cols=337 Identities=22% Similarity=0.342 Sum_probs=145.1
Q ss_pred CCCeEEEecCCceeEEeeecCcccccccccceeccCCccc--------cceeccC-----------------chhhHHHH
Q psy9135 41 QPKGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKL--------RNLYEYK-----------------DADDLYGL 95 (1107)
Q Consensus 41 ~~~~iViD~GS~~~K~G~age~~P~~i~ps~v~~~~~~~~--------~~~~~~~-----------------~~~~~~~~ 95 (1107)
+.++||||+||+++|+||+|++.|+.++||++|+++.... ++.++|+ +.+.+|+.
T Consensus 5 ~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~dwd~ 84 (394)
T 1k8k_B 5 GRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNWDD 84 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEecHHH
Confidence 3467899999999999999999999999999998865321 2344443 34567999
Q ss_pred HHHHHHHHH-hhccccCCCCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCceEEEEEeCCCce
Q psy9135 96 LIEFIRKIF-FKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGLVLDIGYSEA 174 (1107)
Q Consensus 96 le~i~~~~~-~~~L~~~~~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~tglVVDiG~~~T 174 (1107)
++.+|+|+| ++.|+++++++|+++++|+++++.+|++++|++||.|++|++++++++++|+|++|+++|+|||+|+++|
T Consensus 85 ~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~T 164 (394)
T 1k8k_B 85 MKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVT 164 (394)
T ss_dssp ---------------------------------------------------------------------CCEEEECSSCE
T ss_pred HHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCce
Confidence 999999999 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCEecccceEEecccHHHHHHHHHHhhhhhhhhhhhhHHHHhhcCCCCCCccccccccCCCHHHHHHHHHhcee
Q psy9135 175 TLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCF 254 (1107)
Q Consensus 175 ~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~e~iKe~~c~ 254 (1107)
+|+||++|+++.+++.++++||+++|++|.++ |+++++.+. ...+...+|+||+++||
T Consensus 165 ~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~--------------l~~~~~~~~--------~~~~~~~ae~iK~~~~~ 222 (394)
T 1k8k_B 165 HICPVYEGFSLPHLTRRLDIAGRDITRYLIKL--------------LLLRGYAFN--------HSADFETVRMIKEKLCY 222 (394)
T ss_dssp EEECEETTEECSTTCEEESCCHHHHHHHHHHH--------------HHHTTCCCC--------TTTTHHHHHHHHHHHCC
T ss_pred EeeeeECCEEcccceEEeeccHHHHHHHHHHH--------------HHhcCCCCC--------cHHHHHHHHHHHHhhee
Confidence 99999999999999999999999999999999 776654331 22478999999999999
Q ss_pred eccch-hHHHHHhcCCCCCCCCCeeeecCCCcccccCccchhhhhhhhcchhhhhhhHHHHHHhhhhhcccCCCcccccc
Q psy9135 255 VTTME-RSAEIAAKNPDHKYPSGFMYPLKNGKKIPVSGHIRETAFEVLFELDLDMLNIATIILDSLLSVASSDGREETQY 333 (1107)
Q Consensus 255 v~~~~-~~~~~~~~~~~~~~~~~~~y~Lpd~~~i~i~~~~r~~~~e~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (1107)
++.+. .+.+..... ......|+||||+.+.+
T Consensus 223 v~~d~~~~~~~~~~~----~~~~~~~~lpdg~~i~i-------------------------------------------- 254 (394)
T 1k8k_B 223 VGYNIEQEQKLALET----TVLVESYTLPDGRIIKV-------------------------------------------- 254 (394)
T ss_dssp CCSSHHHHHHHHHHC----STTCEEEECTTSCEEEE--------------------------------------------
T ss_pred EecCHHHHHHhhccC----CcCceEEECCCCCEEEE--------------------------------------------
Confidence 98533 222222211 14457788998877554
Q ss_pred ccccccccCCCcchhhhccCCcccccccchhccccccCCccchhhhhhcccccccccccchhhccccccccCCCCCCCcc
Q psy9135 334 FPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYNKRAIQKDVYLNNNVIPDWC 413 (1107)
Q Consensus 334 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~ 413 (1107)
T Consensus 255 -------------------------------------------------------------------------------- 254 (394)
T 1k8k_B 255 -------------------------------------------------------------------------------- 254 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCCCCCcccccCCcccccccccccCC---CCCCCCHHHHHHHHHhccCccchhhhhccEEEEcCCCCccC
Q psy9135 414 NLSVLGTDLKKSVNPYLHFPVSGHIRETAFEVLFEL---DLDMLNIATIILDSLLKTGRDMKKPLAENILLTGGTAMTPG 490 (1107)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~er~~~pE~lF~p---~~~~~gL~e~I~~sI~~~~~d~r~~L~~nIvLtGG~S~ipG 490 (1107)
+.|||++||+||+| +.+..+|+++|.++|.+||+|+|++|++||+||||+|++||
T Consensus 255 ----------------------~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G 312 (394)
T 1k8k_B 255 ----------------------GGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPG 312 (394)
T ss_dssp ----------------------CTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTT
T ss_pred ----------------------CchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCccccccc
Confidence 56888899999998 56788999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhc-----------CCCCccccccceeEEEEcCCCCCccccchhHHhhcCCcccc-cccccHHHHHhcCC
Q psy9135 491 LKYRLLQELRTLI-----------ESPPYKDKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYN-KRAIQKDAYLNNNM 558 (1107)
Q Consensus 491 f~eRL~~EL~~~~-----------~~~~~~~~~~~~~v~v~~~~~~~~~~aW~Ggsilasl~~f~-~~~ITk~eYeE~G~ 558 (1107)
|.+||++||+.+. |. ..+++|.+++ +|.+++|+|||++|++++|+ ++||||+||+|+|+
T Consensus 313 ~~~rl~~el~~~~~~~~~~~~~~~p~--------~~~v~v~~~~-~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~ 383 (394)
T 1k8k_B 313 LPSRLERELKQLYLERVLKGDVEKLS--------KFKIRIEDPP-RRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGV 383 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCCCTTC--------CCCC------------------------------------------
T ss_pred HHHHHHHHHHHHHhhhhcccccCCCC--------ceEEEEecCC-CcceeEEhhhHHhhCCcCCccceeecHHHHhhhCH
Confidence 9999999999987 43 2368888766 89999999999999999999 99999999999998
No 7
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=3.2e-57 Score=527.11 Aligned_cols=338 Identities=24% Similarity=0.397 Sum_probs=290.2
Q ss_pred CCCCeEEEecCCceeEEeeecCcccccccccceeccCCccc------cceeccC-----------------chhhHHHHH
Q psy9135 40 FQPKGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKL------RNLYEYK-----------------DADDLYGLL 96 (1107)
Q Consensus 40 ~~~~~iViD~GS~~~K~G~age~~P~~i~ps~v~~~~~~~~------~~~~~~~-----------------~~~~~~~~l 96 (1107)
++.++||||+||+++|+||+|++.|+.++||++|+++.... ++.++|+ +.+.+|+.+
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~~ 82 (375)
T 2fxu_A 3 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 82 (375)
T ss_dssp -CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHHH
T ss_pred CCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHHH
Confidence 35678999999999999999999999999999998865431 2334443 344579999
Q ss_pred HHHHHHHHhhccccCCCCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCceEEEEEeCCCceEE
Q psy9135 97 IEFIRKIFFKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGLVLDIGYSEATL 176 (1107)
Q Consensus 97 e~i~~~~~~~~L~~~~~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~tglVVDiG~~~T~V 176 (1107)
+.+|+|+|++.|+++++++++++++|+++++.+|++++|++||.+|++++++++++++|+|++|+++++|||+|+++|+|
T Consensus 83 e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~v 162 (375)
T 2fxu_A 83 EKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHN 162 (375)
T ss_dssp HHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEEE
T ss_pred HHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceEE
Confidence 99999999889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCEecccceEEecccHHHHHHHHHHhhhhhhhhhhhhHHHHhhcCCCCCCccccccccCCCHHHHHHHHHhceeec
Q psy9135 177 LPVYEGVPVLCAWKDLSLGGQSVEAHIRRGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFVT 256 (1107)
Q Consensus 177 ~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~e~iKe~~c~v~ 256 (1107)
+||++|+++.+++.++++||+++|++|.++ |++++..+. ...+...+++||+++||++
T Consensus 163 ~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~--------------l~~~~~~~~--------~~~~~~~~e~iK~~~~~v~ 220 (375)
T 2fxu_A 163 VPIYEGYALPHAIMRLDLAGRDLTDYLMKI--------------LTERGYSFV--------TTAEREIVRDIKEKLCYVA 220 (375)
T ss_dssp EEEETTEECGGGCEEESCCHHHHHHHHHHH--------------HHHHTCCCC--------SHHHHHHHHHHHHHHCCCC
T ss_pred eEeECCEEeccceEEeccCHHHHHHHHHHH--------------HHhcCCCCC--------cHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999 666553321 1135689999999999998
Q ss_pred cchh-HHHHHhcCCCCCCCCCeeeecCCCcccccCccchhhhhhhhcchhhhhhhHHHHHHhhhhhcccCCCcccccccc
Q psy9135 257 TMER-SAEIAAKNPDHKYPSGFMYPLKNGKKIPVSGHIRETAFEVLFELDLDMLNIATIILDSLLSVASSDGREETQYFP 335 (1107)
Q Consensus 257 ~~~~-~~~~~~~~~~~~~~~~~~y~Lpd~~~i~i~~~~r~~~~e~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1107)
.... +.+..... ......|+||||+.+.+
T Consensus 221 ~~~~~e~~~~~~~----~~~~~~~~lpdg~~i~i---------------------------------------------- 250 (375)
T 2fxu_A 221 LDFENEMATAASS----SSLEKSYELPDGQVITI---------------------------------------------- 250 (375)
T ss_dssp SSHHHHHHHHHHC----STTCEEEECTTSCEEEE----------------------------------------------
T ss_pred ccHHHHHHhhccc----CccCeEEECCCCCEEEE----------------------------------------------
Confidence 5332 22211111 13457788888877554
Q ss_pred ccccccCCCcchhhhccCCcccccccchhccccccCCccchhhhhhcccccccccccchhhccccccccCCCCCCCcccc
Q psy9135 336 FRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYNKRAIQKDVYLNNNVIPDWCNL 415 (1107)
Q Consensus 336 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~ 415 (1107)
T Consensus 251 -------------------------------------------------------------------------------- 250 (375)
T 2fxu_A 251 -------------------------------------------------------------------------------- 250 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCCCCcccccCCcccccccccccCC---CCCCCCHHHHHHHHHhccCccchhhhhccEEEEcCCCCccChH
Q psy9135 416 SVLGTDLKKSVNPYLHFPVSGHIRETAFEVLFEL---DLDMLNIATIILDSLLKTGRDMKKPLAENILLTGGTAMTPGLK 492 (1107)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~er~~~pE~lF~p---~~~~~gL~e~I~~sI~~~~~d~r~~L~~nIvLtGG~S~ipGf~ 492 (1107)
+.|||++||+||+| +.+..+|+++|.++|++||+|+|+++++||+||||+|++|||.
T Consensus 251 --------------------~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~ 310 (375)
T 2fxu_A 251 --------------------GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIA 310 (375)
T ss_dssp --------------------STHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHH
T ss_pred --------------------ChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHH
Confidence 45778888888887 4567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCccccccceeEEEEcCCCCCccccchhHHhhcCCcccccccccHHHHHhcCC
Q psy9135 493 YRLLQELRTLIESPPYKDKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYNKRAIQKDAYLNNNM 558 (1107)
Q Consensus 493 eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~aW~Ggsilasl~~f~~~~ITk~eYeE~G~ 558 (1107)
+||++||..+.|.. .+++|..++ +|.+++|+||+++|++++|+++||||+||+|+|+
T Consensus 311 ~rl~~el~~~~p~~--------~~v~v~~~~-~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~ 367 (375)
T 2fxu_A 311 DRMQKEITALAPST--------MKIKIIAPP-ERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 367 (375)
T ss_dssp HHHHHHHHHHSCTT--------CCCCEECCT-TTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCG
T ss_pred HHHHHHHHHhCCCC--------eeEEEEcCC-CCCccEEcchHHhhCcccHhhceeeHHHHhhhCh
Confidence 99999999998863 367888766 8999999999999999999999999999999997
No 8
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-56 Score=548.57 Aligned_cols=299 Identities=14% Similarity=0.149 Sum_probs=221.0
Q ss_pred HHhhHHHHHHHHHHHHHhccccCCCC---ceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCceEE
Q psy9135 783 ADDLYGLLIEFIRKIFFKYFVTSPKD---KRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGL 859 (1107)
Q Consensus 783 ~~~~~d~le~i~~~~~~~~L~~~~~~---~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~tgl 859 (1107)
.+.+||+||++|+|+|++.|++++++ |||||+||+++++..|++|+|+|||+|+||+++++++++||+||+|++|||
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tgl 249 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTC 249 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEE
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceE
Confidence 67899999999999999999998876 999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCceEEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHHhcee
Q psy9135 860 VLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCF 939 (1107)
Q Consensus 860 VVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe~~c~ 939 (1107)
|||+|++.|+|+||+||++++++++++++| |++||++|+++|++++.+.... ... ...+.+++++|||++||
T Consensus 250 VVDiG~~~T~v~PV~dG~~l~~~~~rl~~G-G~~lt~~L~~lL~~~~~~~~~~---~~~----~~~d~~~v~~iKe~~c~ 321 (593)
T 4fo0_A 250 IVDVGDQKTSVCCVEDGVSHRNTRLCLAYG-GSDVSRCFYWLMQRAGFPYREC---QLT----NKMDCLLLQHLKETFCH 321 (593)
T ss_dssp EEEECSSCEEEEEEESSCBCGGGCEEESCC-HHHHHHHHHHHHHHTTCSCTTC---CTT----CHHHHHHHHHHHHHHCB
T ss_pred EEEeCCCceeeeeeECCEEehhheEEeccc-HHHHHHHHHHHHHhcCCCcccc---ccc----cchhHHHHHHHHHHhcc
Confidence 999999999999999999999999999999 9999999999999987321110 000 11234699999999999
Q ss_pred eccchHHHH-------------------------HHh-------------------------------------------
Q psy9135 940 VTTMERSAE-------------------------IAA------------------------------------------- 951 (1107)
Q Consensus 940 v~~~~~~~~-------------------------~~~------------------------------------------- 951 (1107)
|+.+....+ ...
T Consensus 322 v~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (593)
T 4fo0_A 322 LDQDISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQ 401 (593)
T ss_dssp CCTTCCSCEEEEEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------
T ss_pred cccchHHhhhhhhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccch
Confidence 985431100 000
Q ss_pred cCCCCCCCCceEEeCCCCCEEEecccccccccccccCCCC-----------------------------------CCCcH
Q psy9135 952 KNPDHKYPSGFMYPLKNGKKIPVSGHIRETAFEVLFELDL-----------------------------------DMLNI 996 (1107)
Q Consensus 952 ~~~~~~~~~~~~y~Lpdg~~i~l~~~erf~~~E~LF~P~~-----------------------------------~~~gL 996 (1107)
............|++|||+.+.+ +.+|+.+||.||+|.. +..||
T Consensus 402 ~~~~~~~~~~~~~~~p~g~~~~~-~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL 480 (593)
T 4fo0_A 402 EQSAKATADRKSASKPIGFEGDL-RGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGL 480 (593)
T ss_dssp ----------------------------------------------------------------------CHHHHSCCCH
T ss_pred hhhhhcccccccccCCCCccccc-ccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCH
Confidence 00000012346788999999999 8999999999999942 24699
Q ss_pred HHHHHHHHHcCCcccccccC-------------CCCCCCCCccchHHHHHhhhhCCCcccccccceeeEEEEeCC--CCc
Q psy9135 997 ATIILDSLLSVASSDGREET-------------QYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFP--AKE 1061 (1107)
Q Consensus 997 ~~~I~~sI~~~~~~d~r~~L-------------~Gf~~~~~~~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~~~~--~~~ 1061 (1107)
+++|.+||.+|+..|+|+.| ||| .+||++||+.+.| .. + ......++|+.++ .+|
T Consensus 481 ~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf------~~RL~~eL~~~~p-~~-~--~~~~~~v~v~~~p~~~d~ 550 (593)
T 4fo0_A 481 DKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKA------QEFLQHRILNKMP-PS-F--RRIIENVDVITRPKDMDP 550 (593)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBTH------HHHHHHHHHHHSC-HH-H--HHHSSCCEEESSGGGCCT
T ss_pred HHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhcH------HHHHHHHHHHhCc-ch-h--ccccceEEEECCCCCCCC
Confidence 99999999999845999988 888 9999999999998 21 0 1112357887443 389
Q ss_pred ceehhhhHHHhhcCCCccceeeeHHHHhhcCC-ccceecc
Q psy9135 1062 NYVAWLGGAIFAATESYNKRAIQKDVYLNNNV-IPDWCNL 1100 (1107)
Q Consensus 1062 ~~~aW~GgSIlasl~~f~~~~ITk~eYeE~G~-i~d~~~~ 1100 (1107)
++++|+||||||+|++|+++||||+||+|+|+ |++++|+
T Consensus 551 ~~~aW~GgSilasL~~f~~~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 551 RLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp TTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTTHHHHHHCS
T ss_pred ceeeehhhHHHhcCccHHHeeECHHHHHhhCcHHHhhcCC
Confidence 99999999999999999999999999999997 9888885
No 9
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=4e-54 Score=508.63 Aligned_cols=350 Identities=21% Similarity=0.310 Sum_probs=285.4
Q ss_pred CCCeEEEecCCceeEEeeecCcccccccccceeccCCcc--------------ccceeccCch----------------h
Q psy9135 41 QPKGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNK--------------LRNLYEYKDA----------------D 90 (1107)
Q Consensus 41 ~~~~iViD~GS~~~K~G~age~~P~~i~ps~v~~~~~~~--------------~~~~~~~~~~----------------~ 90 (1107)
..++||||+||+++|+||+|++.|+.++||++++++... ..++++|+++ +
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~pi~~G~i 83 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIV 83 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTTSEEECCEETTEE
T ss_pred CCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCCCEEeccccCCEE
Confidence 467899999999999999999999999999999886532 1235555533 4
Q ss_pred hHHHHHHHHHHHHHhhccccCCCCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhcc---------CCC
Q psy9135 91 DLYGLLIEFIRKIFFKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCT---------LGV 161 (1107)
Q Consensus 91 ~~~~~le~i~~~~~~~~L~~~~~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~---------~g~ 161 (1107)
.+|+.++.+|+|+|++.|+++++++++++|+|+++++.+|+++.|++||.+|++++++++++++|+|+ .+.
T Consensus 84 ~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~ 163 (418)
T 1k8k_A 84 EDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTL 163 (418)
T ss_dssp SCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCC
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCC
Confidence 57999999999999888999999999999999999999999999999999999999999999999999 566
Q ss_pred ceEEEEEeCCCceEEEEeecCEecccceEEecccHHHHHHHHHHhhhhhhhhhhhhHHHHhhcCCCCCCccccccccCCC
Q psy9135 162 NTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLS 241 (1107)
Q Consensus 162 ~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 241 (1107)
+|+|||+|+++|+|+||++|+++.+++.++++||+++|++|.++ |++++..++ ...+
T Consensus 164 -~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~--------------l~~~~~~~~--------~~~~ 220 (418)
T 1k8k_A 164 -TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQL--------------LRDREVGIP--------PEQS 220 (418)
T ss_dssp -CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHH--------------HHTTCCCCC--------GGGH
T ss_pred -eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHH--------------HHhcCCCCC--------CHHH
Confidence 99999999999999999999999999999999999999999999 766553321 1235
Q ss_pred HHHHHHHHHhceeeccch-hHHHHHhcCCCCCCCCCeeeecCCCcccccCccchhhhhhhhcchhhhhhhHHHHHHhhhh
Q psy9135 242 DSIIEDIKVCSCFVTTME-RSAEIAAKNPDHKYPSGFMYPLKNGKKIPVSGHIRETAFEVLFELDLDMLNIATIILDSLL 320 (1107)
Q Consensus 242 ~~~~e~iKe~~c~v~~~~-~~~~~~~~~~~~~~~~~~~y~Lpd~~~i~i~~~~r~~~~e~lF~~~~~~~~~~~~~~~~~~ 320 (1107)
...++++|+++||++... .+.+...... ......|++||+.. +
T Consensus 221 ~~~~e~iK~~~~~v~~~~~~e~~~~~~~~---~~~~~~~~lpd~~~----~----------------------------- 264 (418)
T 1k8k_A 221 LETAKAVKERYSYVCPDLVKEFNKYDTDG---SKWIKQYTGINAIS----K----------------------------- 264 (418)
T ss_dssp HHHHHHHHHHHCCCCSCHHHHHHHHHHSG---GGTCEEEEEECTTT----C-----------------------------
T ss_pred HHHHHHHHHhhchhcccHHHHHHhhcccc---cccceeEECCCCCC----C-----------------------------
Confidence 789999999999998532 2221111110 01235677777653 0
Q ss_pred hcccCCCccccccccccccccCCCcchhhhccCCcccccccchhccccccCCccchhhhhhcccccccccccchhhcccc
Q psy9135 321 SVASSDGREETQYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYNKRAIQK 400 (1107)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 400 (1107)
T Consensus 265 -------------------------------------------------------------------------------- 264 (418)
T 1k8k_A 265 -------------------------------------------------------------------------------- 264 (418)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCcccccccCCCCCCCCCCCcccccCCcccccccccccCCC---CCC-CCHHHHHHHHHhccCccchhhhh
Q psy9135 401 DVYLNNNVIPDWCNLSVLGTDLKKSVNPYLHFPVSGHIRETAFEVLFELD---LDM-LNIATIILDSLLKTGRDMKKPLA 476 (1107)
Q Consensus 401 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~pE~lF~p~---~~~-~gL~e~I~~sI~~~~~d~r~~L~ 476 (1107)
....+.++.|||++||+||+|. .+. .+|+++|.++|++||+|+|++++
T Consensus 265 ----------------------------~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~ 316 (418)
T 1k8k_A 265 ----------------------------KEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLY 316 (418)
T ss_dssp ----------------------------CEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHH
T ss_pred ----------------------------cccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHH
Confidence 0001223789999999999995 343 79999999999999999999999
Q ss_pred ccEEEEcCCCCccChHHHHHHHHHhhcCCCCc--------cccccceeEEEEcCCCCCccccchhHHhhcCCcccccccc
Q psy9135 477 ENILLTGGTAMTPGLKYRLLQELRTLIESPPY--------KDKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYNKRAI 548 (1107)
Q Consensus 477 ~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~~--------~~~~~~~~v~v~~~~~~~~~~aW~Ggsilasl~~f~~~~I 548 (1107)
+||+||||+|++|||.+||++||..+.|...+ .......+++|.+++ +|.+++|+||||+|++++|+++||
T Consensus 317 ~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~-~~~~~~w~Ggsilasl~~f~~~~i 395 (418)
T 1k8k_A 317 KNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHH-MQRYAVWFGGSMLASTPEFYQVCH 395 (418)
T ss_dssp HCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCT-TCTTHHHHHHHHHTTSHHHHHHSE
T ss_pred hceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCC-ccccceeHhHHHHHcCccHhheEE
Confidence 99999999999999999999999988631000 000002367888776 899999999999999999999999
Q ss_pred cHHHHHhcCC
Q psy9135 549 QKDAYLNNNM 558 (1107)
Q Consensus 549 Tk~eYeE~G~ 558 (1107)
||+||+|+|+
T Consensus 396 tk~ey~e~G~ 405 (418)
T 1k8k_A 396 TKKDYEEIGP 405 (418)
T ss_dssp EHHHHHHHCG
T ss_pred EHHHHhhhCH
Confidence 9999999998
No 10
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=3.4e-53 Score=493.23 Aligned_cols=332 Identities=22% Similarity=0.361 Sum_probs=283.8
Q ss_pred ccceEEEecCcceEEEeccCCCCccEEEecceeccCCCCc------cceeec-----------------CCHHhhHHHHH
Q psy9135 735 LKTGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKL------RNLYEY-----------------KDADDLYGLLI 791 (1107)
Q Consensus 735 ~~~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~------~~~~~~-----------------~~~~~~~d~le 791 (1107)
+.++||||+||+++|+||+|++.|+.++||++++++.... +..++| +|.+.|||.++
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~~e 83 (375)
T 2fxu_A 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDME 83 (375)
T ss_dssp CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHHHH
T ss_pred CCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHHHH
Confidence 4578999999999999999999999999999998865431 233333 35667899999
Q ss_pred HHHHHHHHhccccCCCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCceEEEEEcCCCceEEE
Q psy9135 792 EFIRKIFFKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGLVLDIGYSEATLL 871 (1107)
Q Consensus 792 ~i~~~~~~~~L~~~~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~tglVVDiG~~~T~v~ 871 (1107)
.+|+|+|++.|+++++++++++++|+++++..|++++|++||.++++++++++++++|+|++|+++|+|||+|++.|+|+
T Consensus 84 ~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~v~ 163 (375)
T 2fxu_A 84 KIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 163 (375)
T ss_dssp HHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEEEE
T ss_pred HHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHHhceeeccchHHHHHHh
Q psy9135 872 PVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFVTTMERSAEIAA 951 (1107)
Q Consensus 872 PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe~~c~v~~~~~~~~~~~ 951 (1107)
||++|+++.++..++++| |+++|++|.++|.+++ +.+... .+.+.+++||+++||++.+...+....
T Consensus 164 ~v~~G~~~~~~~~~~~~G-G~~lt~~l~~~l~~~~--------~~~~~~----~~~~~~e~iK~~~~~v~~~~~~e~~~~ 230 (375)
T 2fxu_A 164 PIYEGYALPHAIMRLDLA-GRDLTDYLMKILTERG--------YSFVTT----AEREIVRDIKEKLCYVALDFENEMATA 230 (375)
T ss_dssp EEETTEECGGGCEEESCC-HHHHHHHHHHHHHHHT--------CCCCSH----HHHHHHHHHHHHHCCCCSSHHHHHHHH
T ss_pred EeECCEEeccceEEeccC-HHHHHHHHHHHHHhcC--------CCCCcH----HHHHHHHHHHHHHHhhcccHHHHHHhh
Confidence 999999999999999999 9999999999999886 222211 124589999999999987653322111
Q ss_pred cCCCCCCCCceEEeCCCCCEEEecccccccccccccCCC---CCCCcHHHHHHHHHHcCCcccccccC------------
Q psy9135 952 KNPDHKYPSGFMYPLKNGKKIPVSGHIRETAFEVLFELD---LDMLNIATIILDSLLSVASSDGREET------------ 1016 (1107)
Q Consensus 952 ~~~~~~~~~~~~y~Lpdg~~i~l~~~erf~~~E~LF~P~---~~~~gL~~~I~~sI~~~~~~d~r~~L------------ 1016 (1107)
... ......|+||||+.+.+ +.|||.+||.||+|. .+..+|+++|.++|.+|| .|+|+.+
T Consensus 231 ~~~---~~~~~~~~lpdg~~i~i-~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~-~~~~~~l~~~IvLtGG~s~ 305 (375)
T 2fxu_A 231 ASS---SSLEKSYELPDGQVITI-GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCD-IDIRKDLYANNVMSGGTTM 305 (375)
T ss_dssp HHC---STTCEEEECTTSCEEEE-STHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSC-HHHHHHHHTCEEEESGGGC
T ss_pred ccc---CccCeEEECCCCCEEEE-ChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCC-HHHHHHHHhCcEeeCCCCC
Confidence 111 13457899999999999 899999999999995 467899999999999999 9999877
Q ss_pred -CCCCCCCCccchHHHHHhhhhCCCcccccccceeeEEEEeCCCCcceehhhhHHHhhcCCCccceeeeHHHHhhcCC-c
Q psy9135 1017 -QYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYNKRAIQKDVYLNNNV-I 1094 (1107)
Q Consensus 1017 -~Gf~~~~~~~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~~~~~~~~~~aW~GgSIlasl~~f~~~~ITk~eYeE~G~-i 1094 (1107)
||| .+||++||..+.|. . ..++|. .+++|.+++|+|||++|++++|+++||||+||+|+|+ |
T Consensus 306 ~pG~------~~rl~~el~~~~p~-~--------~~v~v~-~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~ 369 (375)
T 2fxu_A 306 YPGI------ADRMQKEITALAPS-T--------MKIKII-APPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSI 369 (375)
T ss_dssp STTH------HHHHHHHHHHHSCT-T--------CCCCEE-CCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGG
T ss_pred CccH------HHHHHHHHHHhCCC-C--------eeEEEE-cCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHH
Confidence 888 99999999999882 1 235665 4558999999999999999999999999999999996 8
Q ss_pred cceecc
Q psy9135 1095 PDWCNL 1100 (1107)
Q Consensus 1095 ~d~~~~ 1100 (1107)
.+++|+
T Consensus 370 ~~~k~~ 375 (375)
T 2fxu_A 370 VHRKCF 375 (375)
T ss_dssp GC----
T ss_pred Hhhhcc
Confidence 888874
No 11
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=2.1e-54 Score=506.13 Aligned_cols=330 Identities=22% Similarity=0.296 Sum_probs=133.6
Q ss_pred ccceEEEecCcceEEEeccCCCCccEEEecceeccCCCCc--------cceeec-----------------CCHHhhHHH
Q psy9135 735 LKTGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKL--------RNLYEY-----------------KDADDLYGL 789 (1107)
Q Consensus 735 ~~~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~--------~~~~~~-----------------~~~~~~~d~ 789 (1107)
+.++||||+||++||+||+|++.|+.++||++++++.... ++.++| +|.+.|||.
T Consensus 5 ~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~dwd~ 84 (394)
T 1k8k_B 5 GRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNWDD 84 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEecHHH
Confidence 4468999999999999999999999999999998865321 233333 356789999
Q ss_pred HHHHHHHHH-HhccccCCCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCceEEEEEcCCCce
Q psy9135 790 LIEFIRKIF-FKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGLVLDIGYSEA 868 (1107)
Q Consensus 790 le~i~~~~~-~~~L~~~~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~tglVVDiG~~~T 868 (1107)
++.+|+|+| ++.|+++++++|+++++|+++++..|++++|++||.|++|++++++++++|+|++|+++|+|||+|++.|
T Consensus 85 ~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~T 164 (394)
T 1k8k_B 85 MKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVT 164 (394)
T ss_dssp ---------------------------------------------------------------------CCEEEECSSCE
T ss_pred HHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCce
Confidence 999999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHHhceeeccchHHHH
Q psy9135 869 TLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFVTTMERSAE 948 (1107)
Q Consensus 869 ~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe~~c~v~~~~~~~~ 948 (1107)
+|+||++|+++.++++++++| |+++|++|.++|++++ +.+.. ..+.+.+++||+++||++.+...+.
T Consensus 165 ~v~pv~~G~~~~~~~~~~~~G-G~~lt~~l~~~l~~~~--------~~~~~----~~~~~~ae~iK~~~~~v~~d~~~~~ 231 (394)
T 1k8k_B 165 HICPVYEGFSLPHLTRRLDIA-GRDITRYLIKLLLLRG--------YAFNH----SADFETVRMIKEKLCYVGYNIEQEQ 231 (394)
T ss_dssp EEECEETTEECSTTCEEESCC-HHHHHHHHHHHHHHTT--------CCCCT----TTTHHHHHHHHHHHCCCCSSHHHHH
T ss_pred EeeeeECCEEcccceEEeecc-HHHHHHHHHHHHHhcC--------CCCCc----HHHHHHHHHHHHhheeEecCHHHHH
Confidence 999999999999999999999 9999999999999886 22221 1234689999999999997653322
Q ss_pred HHhcCCCCCCCCceEEeCCCCCEEEecccccccccccccCCC---CCCCcHHHHHHHHHHcCCcccccccC---------
Q psy9135 949 IAAKNPDHKYPSGFMYPLKNGKKIPVSGHIRETAFEVLFELD---LDMLNIATIILDSLLSVASSDGREET--------- 1016 (1107)
Q Consensus 949 ~~~~~~~~~~~~~~~y~Lpdg~~i~l~~~erf~~~E~LF~P~---~~~~gL~~~I~~sI~~~~~~d~r~~L--------- 1016 (1107)
..... .......|+||||+.+.+ +.|||.+||+||+|+ .+..+|+++|.++|.+|| +|+|+.|
T Consensus 232 ~~~~~---~~~~~~~~~lpdg~~i~i-~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~-~d~r~~l~~nIvLtGG 306 (394)
T 1k8k_B 232 KLALE---TTVLVESYTLPDGRIIKV-GGERFEAPEALFQPHLINVEGVGVAELLFNTIQAAD-IDTRSEFYKHIVLSGG 306 (394)
T ss_dssp HHHHH---CSTTCEEEECTTSCEEEE-CTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSC-TTTHHHHHTTCEEESG
T ss_pred Hhhcc---CCcCceEEECCCCCEEEE-CchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCC-HHHHHHHHhCEEEeCc
Confidence 11111 113457899999999999 899999999999995 567899999999999999 9999887
Q ss_pred ----CCCCCCCCccchHHHHHhhhh-----------CCCcccccccceeeEEEEeCCCCcceehhhhHHHhhcCCCcc-c
Q psy9135 1017 ----QYFPFRCWVNTRTPEKLCCLV-----------GWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAATESYN-K 1080 (1107)
Q Consensus 1017 ----~Gf~~~~~~~eRL~~EL~~l~-----------p~~~~~~~~~~~~~~~v~~~~~~~~~~aW~GgSIlasl~~f~-~ 1080 (1107)
||| .+||++||..+. | . . .+++|. .+++|.+++|+||||+|++++|+ +
T Consensus 307 ~s~~~G~------~~rl~~el~~~~~~~~~~~~~~~p-~-----~---~~v~v~-~~~~~~~~~w~Ggsilasl~~f~~~ 370 (394)
T 1k8k_B 307 STMYPGL------PSRLERELKQLYLERVLKGDVEKL-S-----K---FKIRIE-DPPRRKHMVFLGGAVLADIMKDKDN 370 (394)
T ss_dssp GGCSTTH------HHHHHHHHHHHHHHHTCSSCCCTT-C-----C---CCC-----------------------------
T ss_pred ccccccH------HHHHHHHHHHHHhhhhcccccCCC-C-----c---eEEEEe-cCCCcceeEEhhhHHhhCCcCCccc
Confidence 888 999999999987 4 1 0 135664 45589999999999999999999 9
Q ss_pred eeeeHHHHhhcCC-cccee
Q psy9135 1081 RAIQKDVYLNNNV-IPDWC 1098 (1107)
Q Consensus 1081 ~~ITk~eYeE~G~-i~d~~ 1098 (1107)
+||||+||+|+|+ |.+++
T Consensus 371 ~~itk~eY~e~G~~~~~~~ 389 (394)
T 1k8k_B 371 FWMTRQEYQEKGVRVLEKL 389 (394)
T ss_dssp -------------------
T ss_pred eeecHHHHhhhCHHHHHhc
Confidence 9999999999996 77763
No 12
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=1.1e-49 Score=470.74 Aligned_cols=339 Identities=21% Similarity=0.282 Sum_probs=279.2
Q ss_pred ccceEEEecCcceEEEeccCCCCccEEEecceeccCCCC--------------ccceeecC----------------CHH
Q psy9135 735 LKTGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNK--------------LRNLYEYK----------------DAD 784 (1107)
Q Consensus 735 ~~~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~--------------~~~~~~~~----------------~~~ 784 (1107)
+.++||||+||+++|+||+|++.|+.++||++++++... .++.++|+ |.+
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~pi~~G~i 83 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIV 83 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTTSEEECCEETTEE
T ss_pred CCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCCCEEeccccCCEE
Confidence 346899999999999999999999999999999886532 02245543 456
Q ss_pred hhHHHHHHHHHHHHHhccccCCCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcc---------cCC
Q psy9135 785 DLYGLLIEFIRKIFFKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCT---------LGV 855 (1107)
Q Consensus 785 ~~~d~le~i~~~~~~~~L~~~~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya---------~g~ 855 (1107)
.+||.++.+|+|+|++.|+++++++++++++|+++++..|+++.|++||.++++++++++++++|+|+ .++
T Consensus 84 ~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~ 163 (418)
T 1k8k_A 84 EDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTL 163 (418)
T ss_dssp SCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCC
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCC
Confidence 78999999999999889999999999999999999999999999999999999999999999999999 566
Q ss_pred ceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHH
Q psy9135 856 NTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKV 935 (1107)
Q Consensus 856 ~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe 935 (1107)
+|+|||+|++.|+|+||++|+++.+++.++++| |+++|++|.++|.+++ +.++. ..+.+.++++|+
T Consensus 164 -~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lG-G~~lt~~l~~~l~~~~--------~~~~~----~~~~~~~e~iK~ 229 (418)
T 1k8k_A 164 -TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIA-GRDITYFIQQLLRDRE--------VGIPP----EQSLETAKAVKE 229 (418)
T ss_dssp -CEEEEEESSSCEEEEEEETTEECGGGCEEESCS-HHHHHHHHHHHHHTTC--------CCCCG----GGHHHHHHHHHH
T ss_pred -eEEEEEcCCCceEEEEeECCEEcccceEEEeCc-HHHHHHHHHHHHHhcC--------CCCCC----HHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999999876 22221 123468999999
Q ss_pred hceeeccchHHHHHHhcCCCCCCCCceEEeCCCCC-----EEEecccccccccccccCCCC---C-CCcHHHHHHHHHHc
Q psy9135 936 CSCFVTTMERSAEIAAKNPDHKYPSGFMYPLKNGK-----KIPVSGHIRETAFEVLFELDL---D-MLNIATIILDSLLS 1006 (1107)
Q Consensus 936 ~~c~v~~~~~~~~~~~~~~~~~~~~~~~y~Lpdg~-----~i~l~~~erf~~~E~LF~P~~---~-~~gL~~~I~~sI~~ 1006 (1107)
++||+..+... +..+.... +......|++||+. .+.+ +.|||.+||+||+|++ + ..+|+++|.++|.+
T Consensus 230 ~~~~v~~~~~~-e~~~~~~~-~~~~~~~~~lpd~~~~~~~~i~l-~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~ 306 (418)
T 1k8k_A 230 RYSYVCPDLVK-EFNKYDTD-GSKWIKQYTGINAISKKEFSIDV-GYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQN 306 (418)
T ss_dssp HHCCCCSCHHH-HHHHHHHS-GGGTCEEEEEECTTTCCEEEEEE-CTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHH
T ss_pred hhchhcccHHH-HHHhhccc-ccccceeEECCCCCCCcccEEEe-ChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHc
Confidence 99999976532 22110000 00234689999998 8999 8999999999999963 3 36999999999999
Q ss_pred CCcccccccC-------------CCCCCCCCccchHHHHHhhhhCCCcccc------cc--cceeeEEEEeCCCCcceeh
Q psy9135 1007 VASSDGREET-------------QYFPFRCWVNTRTPEKLCCLVGWSNICC------YK--LFIKNFKFHEFPAKENYVA 1065 (1107)
Q Consensus 1007 ~~~~d~r~~L-------------~Gf~~~~~~~eRL~~EL~~l~p~~~~~~------~~--~~~~~~~v~~~~~~~~~~a 1065 (1107)
|| .|+|+.+ ||| .+||++||..+.| ..... .. -....++|. .+++|.+++
T Consensus 307 ~~-~~~~~~l~~~IvL~GG~s~~pg~------~~rl~~el~~~~~-~~~~~~~~~~~~~~~p~~~~v~v~-~~~~~~~~~ 377 (418)
T 1k8k_A 307 CP-IDVRRPLYKNIVLSGGSTMFRDF------GRRLQRDLKRTVD-ARLKLSEELSGGRLKPKPIDVQVI-THHMQRYAV 377 (418)
T ss_dssp SC-GGGTTHHHHCEEEESGGGCSTTH------HHHHHHHHHHHHH-HHHHHHHHHC----CCCCCCCCEE-CCTTCTTHH
T ss_pred CC-HHHHHHHHhceEEeCCccccccH------HHHHHHHHHHhhc-cccccccccccccCCCCceeEEEe-CCCccccce
Confidence 99 9999887 777 9999999999874 10000 00 001235664 556899999
Q ss_pred hhhHHHhhcCCCccceeeeHHHHhhcCC-ccceec
Q psy9135 1066 WLGGAIFAATESYNKRAIQKDVYLNNNV-IPDWCN 1099 (1107)
Q Consensus 1066 W~GgSIlasl~~f~~~~ITk~eYeE~G~-i~d~~~ 1099 (1107)
|+||||+|++++|+++||||+||+|+|+ |.++++
T Consensus 378 w~Ggsilasl~~f~~~~itk~ey~e~G~~~~~~~~ 412 (418)
T 1k8k_A 378 WFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNP 412 (418)
T ss_dssp HHHHHHHTTSHHHHHHSEEHHHHHHHCGGGGGCCC
T ss_pred eHhHHHHHcCccHhheEEEHHHHhhhCHHHHhhhc
Confidence 9999999999999999999999999996 888754
No 13
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=3.4e-49 Score=467.74 Aligned_cols=371 Identities=14% Similarity=0.149 Sum_probs=249.8
Q ss_pred HHHHHHHHHHHHhh-ccccCCC---CCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCC-CceEEEE
Q psy9135 93 YGLLIEFIRKIFFK-YFVTSPK---DKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLG-VNTGLVL 167 (1107)
Q Consensus 93 ~~~le~i~~~~~~~-~L~~~~~---~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g-~~tglVV 167 (1107)
|+++|.+|+|+|++ .|+++++ ++|||||||+++++..|++|+|++||+|+||++++++++++|+|++| +++||||
T Consensus 196 WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVV 275 (655)
T 4am6_A 196 ISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVV 275 (655)
T ss_dssp HHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEE
Confidence 99999999999984 8999986 89999999999999999999999999999999999999999999999 6999999
Q ss_pred EeCCCceEEEEeecCEecccceEEecccHHHHHHHHHHhhhhhhhhhhhhHHHHhhcCCCCC-CccccccccCCCHHHHH
Q psy9135 168 DIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRGQSVESHIRSLLIDEIKALENPDP-YIVTVEDVENLSDSIIE 246 (1107)
Q Consensus 168 DiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l~~~~~~~~~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~e 246 (1107)
|+|++.|+|+||++|+++.++++++++||+++|++|.++ |+++|++.+ +.++ ...+..+++
T Consensus 276 DiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kL--------------L~~rgypy~~~~f~----t~~e~eiVr 337 (655)
T 4am6_A 276 NIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALF--------------LLQSDFPLQDWKID----SKHGWLLAE 337 (655)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHH--------------HHHTTCSCCSCCTT----SHHHHHHHH
T ss_pred cCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHH--------------HHHcCCCccccCCC----CcchHHHHH
Confidence 999999999999999999999999999999999999999 777775321 1222 224689999
Q ss_pred HHHHhceeeccchhHHHHHhcCCCCCCCCCeeeecCCCcccccCccchhhhhhhhcchhhhhhhHHHHHHhhhhhcccCC
Q psy9135 247 DIKVCSCFVTTMERSAEIAAKNPDHKYPSGFMYPLKNGKKIPVSGHIRETAFEVLFELDLDMLNIATIILDSLLSVASSD 326 (1107)
Q Consensus 247 ~iKe~~c~v~~~~~~~~~~~~~~~~~~~~~~~y~Lpd~~~i~i~~~~r~~~~e~lF~~~~~~~~~~~~~~~~~~~~~~~~ 326 (1107)
+|||++|||++.+.+.+......+.+......| .+.+ |++|+.+||.||+|.+...... ..
T Consensus 338 dIKEk~CyVs~~Di~~q~~~f~~r~P~~~~~ky------~i~v-gdErflaPe~lF~Pei~~~~~~------------~~ 398 (655)
T 4am6_A 338 RLKKNFTTFQDADVAVQLYNFMNRSPNQPTEKY------EFKL-FDEVMLAPLALFFPQIFKLIRT------------SS 398 (655)
T ss_dssp HHHHHHCCCCGGGCCSEEEEEEECCSSSCEEEE------EEEE-SSHHHHHHHGGGSTHHHHHTSC------------CC
T ss_pred HHHHheEEEcccchhhhhhcceeccCCCCCcce------EEEE-CCeehhCchhcCChhhcccccc------------cc
Confidence 999999999643321111111111222233334 4555 8999999999999997432110 00
Q ss_pred CccccccccccccccCCCcchhhhccCCcccccccchhccccc-cCCccchhhhhhcc---cccccccccc---hhhccc
Q psy9135 327 GREETQYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKF-HEFPAKENYVAWLG---GAIFAATESY---NKRAIQ 399 (1107)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~a~~~~~---~~~~~~ 399 (1107)
++ +.+.++++....+. ...|.+...+++.+ .......... -.+...
T Consensus 399 ~~---------------------------~~~~~~~~~~s~d~y~~~~nd~~S~~q~~~~~~~~~~~~~~~~~~~~~~~~ 451 (655)
T 4am6_A 399 HK---------------------------NSSLEFQLPESRDLFTNELNDWNSLSQFESKEGNLYCDLNDDLKILNRILD 451 (655)
T ss_dssp CC---------------------------CHHHHTTSCCCBCTTTCCBCSCCCHHHHHHHTTCCGGGCCSHHHHHHHHHH
T ss_pred cc---------------------------cchhhhhcCccccccCCCCCCccchhHHhhhccccCCCCccHhhhhhhhhc
Confidence 00 00000111111110 11111111111111 1110000000 000000
Q ss_pred cccccCCCCCCCcccccccCCCCCCCCCCCcccccCCcccccccccccCCCCCCCCHHHHHHHHHhc-c-Cccchh--hh
Q psy9135 400 KDVYLNNNVIPDWCNLSVLGTDLKKSVNPYLHFPVSGHIRETAFEVLFELDLDMLNIATIILDSLLK-T-GRDMKK--PL 475 (1107)
Q Consensus 400 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~pE~lF~p~~~~~gL~e~I~~sI~~-~-~~d~r~--~L 475 (1107)
....+++ ...+. |+..-.--....+|..+|.+||.. | ..|.+| ++
T Consensus 452 ~~~~~~~-----------~~~~~--------------------~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~ 500 (655)
T 4am6_A 452 AHNIIDQ-----------LQDKP--------------------ENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSF 500 (655)
T ss_dssp HHHHHHH-----------HHTSS--------------------CSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHH
T ss_pred ccccccc-----------cccCC--------------------cccccccccccccHHHHHHHHHHhhhccccHHHHHHH
Confidence 0000000 00000 000000012357999999999984 4 346665 99
Q ss_pred hccEEEEcCCCCccChHHHHHHHHHhhcCCCC----c---ccc-------------------------------------
Q psy9135 476 AENILLTGGTAMTPGLKYRLLQELRTLIESPP----Y---KDK------------------------------------- 511 (1107)
Q Consensus 476 ~~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~----~---~~~------------------------------------- 511 (1107)
|+||+++||+|+||||...|...|....|.-- + +..
T Consensus 501 y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVE 580 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhh
Confidence 99999999999999999988888877555310 0 000
Q ss_pred ---------------ccceeEEEEcCCC--CCccccchhHHhhcCCcccccccccHHHHHhcCC
Q psy9135 512 ---------------LFIKNFKFHEFPA--KENYVAWLGGAIFAATESYNKRAIQKDAYLNNNM 558 (1107)
Q Consensus 512 ---------------~~~~~v~v~~~~~--~~~~~aW~Ggsilasl~~f~~~~ITk~eYeE~G~ 558 (1107)
-...+|+|+++|. ||++++|+||||+|+|++|+++||||+||+|+|+
T Consensus 581 ~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~ 644 (655)
T 4am6_A 581 ELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGS 644 (655)
T ss_dssp HHHHHHHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGG
T ss_pred hhhhhhhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcc
Confidence 0123589998874 4699999999999999999999999999999998
No 14
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=9.3e-45 Score=429.89 Aligned_cols=287 Identities=13% Similarity=0.137 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHHHh-ccccCCC---CceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccC-CceEEEE
Q psy9135 787 YGLLIEFIRKIFFK-YFVTSPK---DKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLG-VNTGLVL 861 (1107)
Q Consensus 787 ~d~le~i~~~~~~~-~L~~~~~---~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g-~~tglVV 861 (1107)
||.++++|+|+|++ .|+++|+ ++||||+||+++++..|++|+|++||+|++|+++++.++++|+||+| ++||+||
T Consensus 196 WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVV 275 (655)
T 4am6_A 196 ISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVV 275 (655)
T ss_dssp HHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEE
Confidence 99999999999984 8999996 89999999999999999999999999999999999999999999999 7999999
Q ss_pred EcCCCceEEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHHhceeec
Q psy9135 862 DIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFVT 941 (1107)
Q Consensus 862 DiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe~~c~v~ 941 (1107)
|+|++.|+|+||++|++++++++++++| |+++|++|.++|+++++.. ..+.++.. .+.+++++|||++|||+
T Consensus 276 DiG~g~T~VvPV~eG~vl~~ai~rL~iG-G~dLT~yL~kLL~~rgypy---~~~~f~t~----~e~eiVrdIKEk~CyVs 347 (655)
T 4am6_A 276 NIGAAETRIACVDEGTVLEHSAITLDYG-GDDITRLFALFLLQSDFPL---QDWKIDSK----HGWLLAERLKKNFTTFQ 347 (655)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCC-HHHHHHHHHHHHHHTTCSC---CSCCTTSH----HHHHHHHHHHHHHCCCC
T ss_pred cCCCceEEEEEEeCCEEEhhheeeecch-HHHHHHHHHHHHHHcCCCc---cccCCCCc----chHHHHHHHHHheEEEc
Confidence 9999999999999999999999999999 9999999999999988211 01123322 23569999999999996
Q ss_pred cchHHHHHHhcCCCCCCCCceEE--eCCCC----CEEEecccccccccccccCCCC------------------------
Q psy9135 942 TMERSAEIAAKNPDHKYPSGFMY--PLKNG----KKIPVSGHIRETAFEVLFELDL------------------------ 991 (1107)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~y--~Lpdg----~~i~l~~~erf~~~E~LF~P~~------------------------ 991 (1107)
...-. .....| ..|++ +.+++ |.|||+|||+||+|.+
T Consensus 348 ~~Di~------------~q~~~f~~r~P~~~~~ky~i~v-gdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~ 414 (655)
T 4am6_A 348 DADVA------------VQLYNFMNRSPNQPTEKYEFKL-FDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDL 414 (655)
T ss_dssp GGGCC------------SEEEEEEECCSSSCEEEEEEEE-SSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCT
T ss_pred ccchh------------hhhhcceeccCCCCCcceEEEE-CCeehhCchhcCChhhcccccccccccchhhhhcCccccc
Confidence 33210 011122 23553 46888 9999999999999830
Q ss_pred ---------------------------C-------------------------------CCcHHHHHHHHHH-cCCcccc
Q psy9135 992 ---------------------------D-------------------------------MLNIATIILDSLL-SVASSDG 1012 (1107)
Q Consensus 992 ---------------------------~-------------------------------~~gL~~~I~~sI~-~~~~~d~ 1012 (1107)
+ ..+|.++|.+||. .|.+.|.
T Consensus 415 y~~~~nd~~S~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~ 494 (655)
T 4am6_A 415 FTNELNDWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADV 494 (655)
T ss_dssp TTCCBCSCCCHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCG
T ss_pred cCCCCCCccchhHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccH
Confidence 0 1489999999998 4432477
Q ss_pred cc--cC-------------CCCCCCCCccchHHHHHhhhhCC-----------------------Ccc------------
Q psy9135 1013 RE--ET-------------QYFPFRCWVNTRTPEKLCCLVGW-----------------------SNI------------ 1042 (1107)
Q Consensus 1013 r~--~L-------------~Gf~~~~~~~eRL~~EL~~l~p~-----------------------~~~------------ 1042 (1107)
++ .+ ||| ..-|...|...-|. .+.
T Consensus 495 ~k~~~~y~nilivGggski~g~------~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (655)
T 4am6_A 495 TRMNSFYSNILIVGGSSKIPAL------DFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQ 568 (655)
T ss_dssp GGHHHHHTCEEEESTTCCCTTH------HHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTT
T ss_pred HHHHHHhhcEEEEcCcccCccH------HHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchh
Confidence 76 33 777 55555544442220 000
Q ss_pred -----------------------cccccceeeEEEEeCCC--CcceehhhhHHHhhcCCCccceeeeHHHHhhcCC-ccc
Q psy9135 1043 -----------------------CCYKLFIKNFKFHEFPA--KENYVAWLGGAIFAATESYNKRAIQKDVYLNNNV-IPD 1096 (1107)
Q Consensus 1043 -----------------------~~~~~~~~~~~v~~~~~--~~~~~aW~GgSIlasl~~f~~~~ITk~eYeE~G~-i~d 1096 (1107)
....-..-+++|..+|. ++++++|+||||+|+|.+|+++||||+||+|.|+ |.+
T Consensus 569 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~ 648 (655)
T 4am6_A 569 ILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQ 648 (655)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGG
T ss_pred hhhhhhhhhhhhhhhhhhhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheE
Confidence 00000112367763331 3489999999999999999999999999999996 999
Q ss_pred eecc
Q psy9135 1097 WCNL 1100 (1107)
Q Consensus 1097 ~~~~ 1100 (1107)
++|+
T Consensus 649 ~k~~ 652 (655)
T 4am6_A 649 YKCI 652 (655)
T ss_dssp TSCS
T ss_pred eccc
Confidence 9885
No 15
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.92 E-value=3.5e-24 Score=246.04 Aligned_cols=183 Identities=15% Similarity=0.118 Sum_probs=145.6
Q ss_pred CeEEEecCCceeEEeeecCcccccccccceeccCC-ccccceecc---------------------CchhhHHHHHHHHH
Q psy9135 43 KGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHT-NKLRNLYEY---------------------KDADDLYGLLIEFI 100 (1107)
Q Consensus 43 ~~iViD~GS~~~K~G~age~~P~~i~ps~v~~~~~-~~~~~~~~~---------------------~~~~~~~~~le~i~ 100 (1107)
++|+||+||.++|+|++++. |...+||+|+.... ++ .+++| ++...+|+.++.+|
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~~~--~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~i~ 80 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTTGE--ILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVML 80 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTTCC--EEEESHHHHTTTTCCCTTEEEECCEETTEESSHHHHHHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCCCc--EEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHHHHHHH
Confidence 56788888888888888765 76778999987654 21 11111 13346799999999
Q ss_pred HHHHhhccccC-CCCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCC-----ceEEEEEeCCCce
Q psy9135 101 RKIFFKYFVTS-PKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV-----NTGLVLDIGYSEA 174 (1107)
Q Consensus 101 ~~~~~~~L~~~-~~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~-----~tglVVDiG~~~T 174 (1107)
.+++.+..... ..+.+++++.|..++..+|+.+.+ .+|..|++.+.++.+|.+++++++. .+.+|||+|+++|
T Consensus 81 ~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggtt 159 (344)
T 1jce_A 81 RYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTT 159 (344)
T ss_dssp HHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCE
T ss_pred HHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeE
Confidence 99995433322 446899999999999999999998 5799999999999999999999986 6899999999999
Q ss_pred EEEEeecCEecccceEEecccHHHHHHHHHHhhhhhhhhhhhhHHHHhhc-CCCCCCccccccccCCCHHHHHHHHHhce
Q psy9135 175 TLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRGQSVESHIRSLLIDEIKAL-ENPDPYIVTVEDVENLSDSIIEDIKVCSC 253 (1107)
Q Consensus 175 ~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~e~iKe~~c 253 (1107)
+++++..|.++. ....++||+++|+.|.+. +.++ + ..++...+|++|+++|
T Consensus 160 dvsv~~~~~~~~--~~~~~lGG~~id~~l~~~--------------l~~~~~------------~~~~~~~ae~~K~~l~ 211 (344)
T 1jce_A 160 EVAVISLGSIVT--WESIRIAGDEMDEAIVQY--------------VRETYR------------VAIGERTAERVKIEIG 211 (344)
T ss_dssp EEEEEETTEEEE--EEEESCSHHHHHHHHHHH--------------HHHHHC------------EECCHHHHHHHHHHHC
T ss_pred EEEEEEcCCEEe--eCCCCccChhHHHHHHHH--------------HHHHhC------------cccCHHHHHHHHHHHh
Confidence 999999999874 467999999999999998 4332 1 1135788999999999
Q ss_pred eecc
Q psy9135 254 FVTT 257 (1107)
Q Consensus 254 ~v~~ 257 (1107)
+...
T Consensus 212 ~~~~ 215 (344)
T 1jce_A 212 NVFP 215 (344)
T ss_dssp BCSC
T ss_pred ccCc
Confidence 8764
No 16
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.83 E-value=4.6e-20 Score=211.70 Aligned_cols=285 Identities=12% Similarity=0.070 Sum_probs=208.9
Q ss_pred ceEEEecCcceEEEeccCCCCccEEEecceeccCC-CCc-------c--------cee----ecCCHHhhHHHHHHHHHH
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHT-NKL-------R--------NLY----EYKDADDLYGLLIEFIRK 796 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~-~~~-------~--------~~~----~~~~~~~~~d~le~i~~~ 796 (1107)
.+|+||+||.++|+|++++. |...+||+++...+ ++. + +.. ..++.+.+|+.++++|.+
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~i~~~ 82 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRY 82 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHHHHHHHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHHHHHHHHH
Confidence 58999999999999999876 77789999987654 210 0 000 123556789999999999
Q ss_pred HHHhccccC-CCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCC-----ceEEEEEcCCCceEE
Q psy9135 797 IFFKYFVTS-PKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV-----NTGLVLDIGYSEATL 870 (1107)
Q Consensus 797 ~~~~~L~~~-~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~-----~tglVVDiG~~~T~v 870 (1107)
++.+..... +...++++++|...+..+|+.+.+. +|..+++.+.++++|.+|+++++. .+.+|||+|++.|++
T Consensus 83 ~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdv 161 (344)
T 1jce_A 83 FINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEV 161 (344)
T ss_dssp HHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEE
T ss_pred HHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEE
Confidence 995533323 4568999999999999999999995 699999999999999999999986 689999999999999
Q ss_pred EEEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHHhceeeccchHHHHHH
Q psy9135 871 LPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFVTTMERSAEIA 950 (1107)
Q Consensus 871 ~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe~~c~v~~~~~~~~~~ 950 (1107)
+++..|.++. ....++| |+++|+.|.+.+.++- . ..++...++++|+++|+........+
T Consensus 162 sv~~~~~~~~--~~~~~lG-G~~id~~l~~~l~~~~---------~------~~~~~~~ae~~K~~l~~~~~~~~~~~-- 221 (344)
T 1jce_A 162 AVISLGSIVT--WESIRIA-GDEMDEAIVQYVRETY---------R------VAIGERTAERVKIEIGNVFPSKENDE-- 221 (344)
T ss_dssp EEEETTEEEE--EEEESCS-HHHHHHHHHHHHHHHH---------C------EECCHHHHHHHHHHHCBCSCCHHHHH--
T ss_pred EEEEcCCEEe--eCCCCcc-ChhHHHHHHHHHHHHh---------C------cccCHHHHHHHHHHHhccCccccCCc--
Confidence 9999998874 4678999 9999999999997652 0 12335589999999998875432111
Q ss_pred hcCCCCCCCCceEEe-----CCCCC--EEEecccccccccccccCCCCCCCcHHHHHHHHHHcCCcccccc-----cC--
Q psy9135 951 AKNPDHKYPSGFMYP-----LKNGK--KIPVSGHIRETAFEVLFELDLDMLNIATIILDSLLSVASSDGRE-----ET-- 1016 (1107)
Q Consensus 951 ~~~~~~~~~~~~~y~-----Lpdg~--~i~l~~~erf~~~E~LF~P~~~~~gL~~~I~~sI~~~~~~d~r~-----~L-- 1016 (1107)
..++ +.+|. .+.+ ..++|. .+|+|.. ..|.+.|.++|.+++ .++++ .+
T Consensus 222 -----------~~~~~~~~~~~~g~~~~~~i-~~~~~~---~~~~~~~--~~i~~~i~~~l~~~~-~~~~~~~~~~~IvL 283 (344)
T 1jce_A 222 -----------LETTVSGIDLSTGLPRKLTL-KGGEVR---EALRSVV--VAIVESVRTTLEKTP-PELVSDIIERGIFL 283 (344)
T ss_dssp -----------CEEEEEEEETTTTEEEEEEE-EHHHHH---HHTHHHH--HHHHHHHHHHHHTSC-HHHHHHHHHHCEEE
T ss_pred -----------ceEEEeccccCCCCceeEEE-eHHHHH---HHHHHHH--HHHHHHHHHHHHhCC-chhccchhhCcEEE
Confidence 1222 33564 4566 344442 3455422 368889999999998 65432 22
Q ss_pred -CCCCCCCCccchHHHHHhhhhCCCcccccccceeeEEEEeCCCCcceehhhhHHHhhc-CCCcc
Q psy9135 1017 -QYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAA-TESYN 1079 (1107)
Q Consensus 1017 -~Gf~~~~~~~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~~~~~~~~~~aW~GgSIlas-l~~f~ 1079 (1107)
.|.+..+++.+||++++.. + +. .+.+|.+++|+||+++++ +++|+
T Consensus 284 ~GG~s~~p~l~~~l~~~~~~--~-------------v~---~~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 284 TGGGSLLRGLDTLLQKETGI--S-------------VI---RSEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp ESGGGCSBTHHHHHHHHHSS--C-------------EE---ECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred ECccccchHHHHHHHHHHCC--C-------------cc---ccCChHHHHHHHHHHHHhChHHHH
Confidence 3332333339999988742 1 12 234789999999999998 46664
No 17
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.67 E-value=5.4e-16 Score=171.64 Aligned_cols=117 Identities=15% Similarity=0.054 Sum_probs=94.6
Q ss_pred CchhhHHHHHHHHHHHHHhhccccCC-CCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCceEE
Q psy9135 87 KDADDLYGLLIEFIRKIFFKYFVTSP-KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGL 165 (1107)
Q Consensus 87 ~~~~~~~~~le~i~~~~~~~~L~~~~-~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~tgl 165 (1107)
++.+.+|+.++.+|++++........ ....++++.|.......|+ ..+.++|.+|++...+..++.++++++|..+++
T Consensus 64 ~g~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~ 142 (272)
T 3h1q_A 64 DGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAARALGINDGI 142 (272)
T ss_dssp TTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEE
T ss_pred CCEEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHHHHcCCCEE
Confidence 35567799999999999865433322 3345677777766555554 566789999999999999999999999999999
Q ss_pred EEEeCCCceEEEEeecCEecccceEEecccHHHHHHHHHHh
Q psy9135 166 VLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 166 VVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l 206 (1107)
|||+|+++|.++++.+|.++. ....++||.++++.+.+.
T Consensus 143 viDiGggst~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~ 181 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGS 181 (272)
T ss_dssp EEEECSSCEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHH
T ss_pred EEEECCCcEEEEEEECCEEEE--EecCCCcHHHHHHHHHHH
Confidence 999999999999999999884 377999999999999887
No 18
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.61 E-value=6e-15 Score=177.82 Aligned_cols=93 Identities=17% Similarity=0.098 Sum_probs=79.1
Q ss_pred CCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCC-----ceEEEEEeCCCceEEEEee--cCEec
Q psy9135 113 KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV-----NTGLVLDIGYSEATLLPVY--EGVPV 185 (1107)
Q Consensus 113 ~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~-----~tglVVDiG~~~T~V~PV~--dG~vl 185 (1107)
....++++.|..++..+|+.+.+. ++..|++.+.++.+|.+|++++|. .+.+|+|+|+++|+++.+. +|...
T Consensus 108 ~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 186 (509)
T 2v7y_A 108 PVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFE 186 (509)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEE
Confidence 457899999999999999999885 699999999999999999998876 4799999999999999776 46432
Q ss_pred -ccceEEecccHHHHHHHHHHh
Q psy9135 186 -LCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 186 -~~~~~~~~iGG~~lt~~L~~l 206 (1107)
.......++||.++|+.|.+.
T Consensus 187 v~a~~g~~~lGG~d~d~~l~~~ 208 (509)
T 2v7y_A 187 VKATAGDNHLGGDDFDQVIIDY 208 (509)
T ss_dssp EEEEEEETTCSHHHHHHHHHHH
T ss_pred EEEecCCCCcCHHHHHHHHHHH
Confidence 223345789999999999988
No 19
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.58 E-value=1.2e-14 Score=168.98 Aligned_cols=93 Identities=12% Similarity=0.053 Sum_probs=77.0
Q ss_pred CCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCc------eEEEEEeCCCceEEEEeecC----
Q psy9135 113 KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVN------TGLVLDIGYSEATLLPVYEG---- 182 (1107)
Q Consensus 113 ~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~------tglVVDiG~~~T~V~PV~dG---- 182 (1107)
....++++.|..++..+|+.+.+. ++..|++.+.++.+|.+++++++.. +.+|||+|+++|+++.+..+
T Consensus 134 ~~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~ 212 (383)
T 1dkg_D 134 PVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDG 212 (383)
T ss_dssp CCCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC---
T ss_pred CCCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCC
Confidence 346799999999999999999886 6899999999999999999887653 78999999999999977754
Q ss_pred --Eeccc-ceEEecccHHHHHHHHHHh
Q psy9135 183 --VPVLC-AWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 183 --~vl~~-~~~~~~iGG~~lt~~L~~l 206 (1107)
..... .....++||.++|+.|.++
T Consensus 213 ~~~~~v~~~~~~~~lGG~~id~~l~~~ 239 (383)
T 1dkg_D 213 EKTFEVLATNGDTHLGGEDFDSRLINY 239 (383)
T ss_dssp -CCCEEEEEEEESSCSHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 22211 2344799999999999988
No 20
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.51 E-value=5.2e-13 Score=155.68 Aligned_cols=93 Identities=20% Similarity=0.158 Sum_probs=76.3
Q ss_pred CCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCc------eEEEEEeCCCceEEEEee--cCEe
Q psy9135 113 KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVN------TGLVLDIGYSEATLLPVY--EGVP 184 (1107)
Q Consensus 113 ~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~------tglVVDiG~~~T~V~PV~--dG~v 184 (1107)
.-..++++.|..++..+|+.+.+.+ +..|++.+.++.+|.+++++++.. +.+|||+|+++|+++.+. ++..
T Consensus 152 ~~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~ 230 (394)
T 3qfu_A 152 KVTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVF 230 (394)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CcceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEE
Confidence 4568999999999999999887776 999999999999999999988653 459999999999877664 4443
Q ss_pred cccce-EEecccHHHHHHHHHHh
Q psy9135 185 VLCAW-KDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 185 l~~~~-~~~~iGG~~lt~~L~~l 206 (1107)
-..+. ...++||.++++.|.+.
T Consensus 231 ~~~~~~~~~~lGG~~~d~~l~~~ 253 (394)
T 3qfu_A 231 EVQATSGDTHLGGEDFDYKIVRQ 253 (394)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHH
T ss_pred EEEEEcCCCCCChHHHHHHHHHH
Confidence 32222 33799999999999988
No 21
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.43 E-value=6.3e-13 Score=146.91 Aligned_cols=241 Identities=15% Similarity=0.021 Sum_probs=162.6
Q ss_pred ceEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhcccc-CCCCceEEEEe
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVT-SPKDKRIVVVE 815 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~-~~~~~~vll~e 815 (1107)
-.++||+||.++|+....++. +. +..... + ..-..++.+.+|+.++++|++++...... ......++++.
T Consensus 29 ~~~gIDiGS~s~k~vi~~~~~-~~-l~~~~~-~------~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tv 99 (272)
T 3h1q_A 29 YKVGVDLGTADIVLVVTDQEG-IP-VAGALK-W------ASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAI 99 (272)
T ss_dssp CEEEEECCSSEEEEEEECTTC-CE-EEEEEE-E------CCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEEC
T ss_pred EEEEEEcccceEEEEEECCCC-cE-EEEEee-c------ccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEc
Confidence 478999999999999854332 21 111000 0 01123578889999999999998654433 22335677777
Q ss_pred ccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHH
Q psy9135 816 SVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVE 895 (1107)
Q Consensus 816 ~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt 895 (1107)
|.......|+ ..+.++|.++++...+..++.++++++|..+++|||+|++.|.++++.+|.++. ....++| |.+++
T Consensus 100 p~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~--~~~~~~G-g~~~~ 175 (272)
T 3h1q_A 100 PPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIAVIEKGKITA--TFDEPTG-GTHLS 175 (272)
T ss_dssp CSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEEEE--ECCBSCC-HHHHH
T ss_pred CCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEEEEECCEEEE--EecCCCc-HHHHH
Confidence 7766665555 455688999999999999999999999999999999999999999999999873 4678999 99999
Q ss_pred HHHHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHHhceeeccchHHHHHHhcCCCCCCCCceEEeCCCCCEEEec
Q psy9135 896 SHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFVTTMERSAEIAAKNPDHKYPSGFMYPLKNGKKIPVS 975 (1107)
Q Consensus 896 ~~L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe~~c~v~~~~~~~~~~~~~~~~~~~~~~~y~Lpdg~~i~l~ 975 (1107)
+.+.+.+.- +.+.++++|++++- . .+
T Consensus 176 ~~l~~~l~~---------------------~~~~ae~~k~~~~~----~--~~--------------------------- 201 (272)
T 3h1q_A 176 LVLAGSYKI---------------------PFEEAETIKKDFSR----H--RE--------------------------- 201 (272)
T ss_dssp HHHHHHHTC---------------------CHHHHHHHHHSSTT----H--HH---------------------------
T ss_pred HHHHHHhCC---------------------CHHHHHHHHHhcCC----H--HH---------------------------
Confidence 999888731 22368888887650 0 00
Q ss_pred ccccccccccccCCCCCCCcHHHHHHHHHHcCCcccccccC--CCCCCCCCccchHHHHHhhhhCCCcccccccceeeEE
Q psy9135 976 GHIRETAFEVLFELDLDMLNIATIILDSLLSVASSDGREET--QYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFK 1053 (1107)
Q Consensus 976 ~~erf~~~E~LF~P~~~~~gL~~~I~~sI~~~~~~d~r~~L--~Gf~~~~~~~eRL~~EL~~l~p~~~~~~~~~~~~~~~ 1053 (1107)
.....+.++ ..+.+.|.+++++++ +...-+ .|.+..+++.++|++++.. +
T Consensus 202 ---~~~~~~~~~------~~i~~~i~~~l~~~~--~~~~ivL~GG~a~~~~l~~~l~~~l~~--~--------------- 253 (272)
T 3h1q_A 202 ---IMRVVRPVI------EKMALIVKEVIKNYD--QTLPVYVVGGTAYLTGFSEEFSRFLGK--E--------------- 253 (272)
T ss_dssp ---HHHHHHHHH------HHHHHHHHHHTTTSC--SSCCEEEESGGGGSTTHHHHHHHHHSS--C---------------
T ss_pred ---HHHHHHHHH------HHHHHHHHHHHHhcC--CCCEEEEECCccchhhHHHHHHHHhCC--C---------------
Confidence 001111122 257777888887775 122222 2222222229999988843 2
Q ss_pred EEeCCCCcceehhhhHHHhh
Q psy9135 1054 FHEFPAKENYVAWLGGAIFA 1073 (1107)
Q Consensus 1054 v~~~~~~~~~~aW~GgSIla 1073 (1107)
+ ..+.+|.+++|+|++++|
T Consensus 254 v-~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 254 V-QVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp C-BCCSSGGGHHHHHHHTTC
T ss_pred c-cccCChHHHHHHHHHhcC
Confidence 1 134588999999999875
No 22
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.41 E-value=2.4e-12 Score=150.72 Aligned_cols=93 Identities=14% Similarity=0.141 Sum_probs=76.3
Q ss_pred CCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCc---------eEEEEEeCCCceEEEEee--c
Q psy9135 113 KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVN---------TGLVLDIGYSEATLLPVY--E 181 (1107)
Q Consensus 113 ~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~---------tglVVDiG~~~T~V~PV~--d 181 (1107)
....++++.|..++..+|+.+.+. ++..|++.+.++.+|.+|+++++.. +.+|+|+|+++|+++.+. +
T Consensus 157 ~~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~ 235 (404)
T 3i33_A 157 KVHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIED 235 (404)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEET
T ss_pred CCCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeC
Confidence 346799999999999999988766 8999999999999999999987643 459999999999998764 4
Q ss_pred CEec-ccceEEecccHHHHHHHHHHh
Q psy9135 182 GVPV-LCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 182 G~vl-~~~~~~~~iGG~~lt~~L~~l 206 (1107)
|... .......++||.++++.|.+.
T Consensus 236 ~~~~v~~~~~~~~lGG~~~d~~l~~~ 261 (404)
T 3i33_A 236 GIFEVKSTAGDTHLGGEDFDNRMVSH 261 (404)
T ss_dssp TEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 4332 222344789999999999888
No 23
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.28 E-value=1.6e-11 Score=147.95 Aligned_cols=284 Identities=16% Similarity=0.084 Sum_probs=175.1
Q ss_pred ceEEEecCcceEEEeccCCCCccEE--------EecceeccCCCCc-------------cceee-----c-------CCH
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGF--------IKSQVKDPHTNKL-------------RNLYE-----Y-------KDA 783 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i--------~ps~vg~~~~~~~-------------~~~~~-----~-------~~~ 783 (1107)
.+|.||+||.+++++++.+..|..+ +||+++....... ..++. | ++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg~p~~~~~~g- 81 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNPNTIISIKRHMGTDYKVEIEG- 81 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCSSEEECGGGTTTSCCCEEETT-
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCCCcHHHHHHhcCCCcEEEECC-
Confidence 5899999999999999988888887 8999876321100 00110 0 11
Q ss_pred HhhHHHHHHHHHHHHH-------hccccCCCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCC-
Q psy9135 784 DDLYGLLIEFIRKIFF-------KYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV- 855 (1107)
Q Consensus 784 ~~~~d~le~i~~~~~~-------~~L~~~~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~- 855 (1107)
..|. .++++.+++. +.+ ......++++.|...+..+|+.+.+. ++..|++.+.++++|.+|++++|.
T Consensus 82 -~~~~-~~ei~a~~L~~l~~~ae~~l--~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~AAAlay~~~ 156 (509)
T 2v7y_A 82 -KQYT-PQEISAIILQYLKSYAEDYL--GEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPTAAALAYGLD 156 (509)
T ss_dssp -EEEC-HHHHHHHHHHHHHHHHHHHH--TSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTGG
T ss_pred -EEEc-HHHHHHHHHHHHHHHHHHHh--CCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHHHHHHHHhhc
Confidence 1122 2333333331 222 23457899999999999999999986 588999999999999999999886
Q ss_pred ----ceEEEEEcCCCceEEEEEE--cCEe-eccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchhh-hhcccH
Q psy9135 856 ----NTGLVLDIGYSEATLLPVY--EGVP-VLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVED-VENLSD 927 (1107)
Q Consensus 856 ----~tglVVDiG~~~T~v~PV~--dG~~-l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~~-~~~l~~ 927 (1107)
.+.+|+|+|++.|.++.+. +|.. +.......++| |.++|+.|.+.|.++-.. .+. ..+.... ....-.
T Consensus 157 ~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lG-G~d~d~~l~~~l~~~~~~-~~~--~~~~~~~~~~~~l~ 232 (509)
T 2v7y_A 157 KEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLG-GDDFDQVIIDYLVNQFKQ-EHG--IDLSKDKMALQRLK 232 (509)
T ss_dssp GSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCS-HHHHHHHHHHHHHHHHHH-HHS--CCGGGCHHHHHHHH
T ss_pred cCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcC-HHHHHHHHHHHHHHHHHH-HhC--CCcccCHHHHHHHH
Confidence 4799999999999999766 3643 22233446899 999999999988765200 000 0011000 000112
Q ss_pred HHHHHHHHhceeeccchHHHHHHhcCCCCCCCCceEEeCC------CC---CEEEecccccccccccccCCCCCCCcHHH
Q psy9135 928 SIIEDIKVCSCFVTTMERSAEIAAKNPDHKYPSGFMYPLK------NG---KKIPVSGHIRETAFEVLFELDLDMLNIAT 998 (1107)
Q Consensus 928 ~~v~~iKe~~c~v~~~~~~~~~~~~~~~~~~~~~~~y~Lp------dg---~~i~l~~~erf~~~E~LF~P~~~~~gL~~ 998 (1107)
..++.+|++++.... ..+.+| +| ..+.+ ..++| |-+|+|-. ..+.+
T Consensus 233 ~~aE~~K~~ls~~~~-------------------~~i~l~~~~~~~~G~~~~~~~i-tr~~f---e~l~~~~~--~~i~~ 287 (509)
T 2v7y_A 233 DAAEKAKKELSGVTQ-------------------TQISLPFISANENGPLHLEMTL-TRAKF---EELSAHLV--ERTMG 287 (509)
T ss_dssp HHHHHHHHHTTTCSE-------------------EEEEEEEEEEETTEEEEEEEEE-EHHHH---HHHTHHHH--HTTHH
T ss_pred HHHHHHHHhcCCCCc-------------------EEEEEeccccCCCCCeeEEEEE-EHHHH---HHHHHHHH--HHHHH
Confidence 467888887764321 122222 23 22355 23333 23444421 25778
Q ss_pred HHHHHHHcCCccc---ccccC--CCCCCCCCccchHHHHHhhhhCCCcccccccceeeEEEEeCCCCcceehhhhHHHhh
Q psy9135 999 IILDSLLSVASSD---GREET--QYFPFRCWVNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFA 1073 (1107)
Q Consensus 999 ~I~~sI~~~~~~d---~r~~L--~Gf~~~~~~~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~~~~~~~~~~aW~GgSIla 1073 (1107)
.|.++|..+. .+ +..-+ .|.+..+++.++|++++.. + + ..+.+|..++|+||+++|
T Consensus 288 ~i~~~L~~a~-~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--~---------------~-~~~~~p~~aVa~Gaa~~a 348 (509)
T 2v7y_A 288 PVRQALQDAG-LTPADIDKVILVGGSTRIPAVQEAIKRELGK--E---------------P-HKGVNPDEVVAIGAAIQG 348 (509)
T ss_dssp HHHHHHHHHT-CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS--C---------------C-BCCSCTTTHHHHHHHHHH
T ss_pred HHHHHHHHcC-CChhHCcEEEEECCcccChHHHHHHHHHhCC--C---------------c-CcCCCchhhhHhhHHHHH
Confidence 8888888775 32 22111 4443333337777777632 1 1 133478899999999998
Q ss_pred c
Q psy9135 1074 A 1074 (1107)
Q Consensus 1074 s 1074 (1107)
.
T Consensus 349 ~ 349 (509)
T 2v7y_A 349 G 349 (509)
T ss_dssp H
T ss_pred H
Confidence 6
No 24
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.24 E-value=1.8e-11 Score=142.18 Aligned_cols=226 Identities=13% Similarity=0.046 Sum_probs=142.1
Q ss_pred CCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCc------eEEEEEcCCCceEEEEEEcC----
Q psy9135 807 KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVN------TGLVLDIGYSEATLLPVYEG---- 876 (1107)
Q Consensus 807 ~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~------tglVVDiG~~~T~v~PV~dG---- 876 (1107)
....++++.|...+..+|+.+.+. ++..|++.+.++++|.+|+++++.. +.+|||+|+++|.++.+..+
T Consensus 134 ~~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~ 212 (383)
T 1dkg_D 134 PVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDG 212 (383)
T ss_dssp CCCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC---
T ss_pred CCCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCC
Confidence 346799999999999999999887 5889999999999999999987653 78999999999999977654
Q ss_pred --Eeecc-ceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccchh-hhhcccHHHHHHHHHhceeeccchHHHHHHhc
Q psy9135 877 --VPVLC-AWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVTVE-DVENLSDSIIEDIKVCSCFVTTMERSAEIAAK 952 (1107)
Q Consensus 877 --~~l~~-~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~~~-~~~~l~~~~v~~iKe~~c~v~~~~~~~~~~~~ 952 (1107)
..... .....++| |.++|+.|.+++.++-.. ... ..+... .....-...++.+|++++......-
T Consensus 213 ~~~~~v~~~~~~~~lG-G~~id~~l~~~l~~~~~~-~~~--~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i------- 281 (383)
T 1dkg_D 213 EKTFEVLATNGDTHLG-GEDFDSRLINYLVEEFKK-DQG--IDLRNDPLAMQRLKEAAEKAKIELSSAQQTDV------- 281 (383)
T ss_dssp -CCCEEEEEEEESSCS-HHHHHHHHHHHHHHHHHH-HHC--CCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEE-------
T ss_pred CCeEEEEEEeCCCCCC-HHHHHHHHHHHHHHHHHH-HhC--CCcccCHHHHHHHHHHHHHHHHHhCCCCceEE-------
Confidence 22111 23346899 999999999998765200 000 001000 0011113578889998875432100
Q ss_pred CCCCCCCCceEEeCCCC-C--EEEecccccccccccccCCCCCCCcHHHHHHHHHHcCCccc---ccccC--CCCCCCCC
Q psy9135 953 NPDHKYPSGFMYPLKNG-K--KIPVSGHIRETAFEVLFELDLDMLNIATIILDSLLSVASSD---GREET--QYFPFRCW 1024 (1107)
Q Consensus 953 ~~~~~~~~~~~y~Lpdg-~--~i~l~~~erf~~~E~LF~P~~~~~gL~~~I~~sI~~~~~~d---~r~~L--~Gf~~~~~ 1024 (1107)
.....+..++| . .+.+ ..++| |-+|+|.. ..+.++|.++|.+++ .. +..-+ .|.+..++
T Consensus 282 ------~i~~~~~~~~G~~~~~~~i-t~~~~---~~~~~~~~--~~i~~~i~~~l~~~~-~~~~~i~~IvL~GG~s~~p~ 348 (383)
T 1dkg_D 282 ------NLPYITADATGPKHMNIKV-TRAKL---ESLVEDLV--NRSIELLKVALQDAG-LSVSDIDDVILVGGQTRMPM 348 (383)
T ss_dssp ------EEEEEEEETTEEEEEEEEE-EHHHH---HHHSHHHH--HHHHHHHHHHHHTTT-CCTTTCCEEEEESGGGGSHH
T ss_pred ------EEecccccCCCCeeEEEEE-eHHHH---HHHHHHHH--HHHHHHHHHHHHHcC-CCHhhCCEEEEecCccccHH
Confidence 00112334445 2 2455 33343 23444421 268888999999886 32 11111 33333333
Q ss_pred ccchHHHHHhhhhCCCcccccccceeeEEEEeCCCCcceehhhhHHHhhcC
Q psy9135 1025 VNTRTPEKLCCLVGWSNICCYKLFIKNFKFHEFPAKENYVAWLGGAIFAAT 1075 (1107)
Q Consensus 1025 ~~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~~~~~~~~~~aW~GgSIlasl 1075 (1107)
+.++|++++.. + + ..+.+|.+++|+||+++|++
T Consensus 349 l~~~l~~~~~~--~---------------v-~~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 349 VQKKVAEFFGK--E---------------P-RKDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp HHHHHHHHHSS--C---------------C-BCSSCTTTHHHHHHHHHTTT
T ss_pred HHHHHHHHhCC--C---------------C-CCCcChHHHHHHHHHHHHHh
Confidence 38888877742 1 1 13457899999999999875
No 25
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.14 E-value=1.5e-10 Score=134.79 Aligned_cols=97 Identities=21% Similarity=0.164 Sum_probs=78.0
Q ss_pred CCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCce------EEEEEcCCCceEEEEEE--cCEe
Q psy9135 807 KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNT------GLVLDIGYSEATLLPVY--EGVP 878 (1107)
Q Consensus 807 ~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~t------glVVDiG~~~T~v~PV~--dG~~ 878 (1107)
.-..++++.|...+..+|+.+.+.+ +..+++.+.++++|.+|+++++... -+|+|+|.+.|.++.+. +|..
T Consensus 152 ~~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~ 230 (394)
T 3qfu_A 152 KVTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVF 230 (394)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CcceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEE
Confidence 4468999999999999999888877 8899999999999999999987543 49999999999776654 4433
Q ss_pred eccc-eEEEeccchHHHHHHHHHHHHhh
Q psy9135 879 VLCA-WKDLSLGGGQSVESHIRSLLIDE 905 (1107)
Q Consensus 879 l~~~-~~~~~~G~G~~lt~~L~~lL~~~ 905 (1107)
-..+ ....++| |.++++.|.+.+.++
T Consensus 231 ~~~~~~~~~~lG-G~~~d~~l~~~l~~~ 257 (394)
T 3qfu_A 231 EVQATSGDTHLG-GEDFDYKIVRQLIKA 257 (394)
T ss_dssp EEEEEEEETTCS-HHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCC-hHHHHHHHHHHHHHH
Confidence 2222 2336899 999999999988643
No 26
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.13 E-value=1.3e-09 Score=132.53 Aligned_cols=92 Identities=14% Similarity=0.111 Sum_probs=77.4
Q ss_pred CCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCC-------ceEEEEEeCCCceEEEEee--cCEe
Q psy9135 114 DKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV-------NTGLVLDIGYSEATLLPVY--EGVP 184 (1107)
Q Consensus 114 ~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~-------~tglVVDiG~~~T~V~PV~--dG~v 184 (1107)
-..++++.|..++..+|+.+.+ .++..|++.+.++.+|.+|++++|. .+.+|+|+|+++|+|+.+. +|..
T Consensus 139 v~~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~ 217 (554)
T 1yuw_A 139 VTNAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIF 217 (554)
T ss_dssp CCEEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcE
Confidence 3579999999999999998877 6688999999999999999988763 5689999999999999876 6754
Q ss_pred c-ccceEEecccHHHHHHHHHHh
Q psy9135 185 V-LCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 185 l-~~~~~~~~iGG~~lt~~L~~l 206 (1107)
- .......++||+++++.|.+.
T Consensus 218 ~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 218 EVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHH
Confidence 2 233445789999999999888
No 27
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.09 E-value=3.5e-09 Score=122.54 Aligned_cols=93 Identities=22% Similarity=0.255 Sum_probs=72.9
Q ss_pred HHHHHHHHHhhcCcceEEEecchhhhhccCC------C-ceEEEEEeCCCceEEEEeecCEecccceEEecccHHHHHHH
Q psy9135 130 RNTLAKVLFKHYEVLSLLYVPSHLVSLCTLG------V-NTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAH 202 (1107)
Q Consensus 130 re~l~eilFE~~~vpsv~~~~~~lls~y~~g------~-~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~ 202 (1107)
.+.+. -+++..|+.-..+..++++++++++ . ...+|||+|+++|+++.+.+|.+.. ....++||+++++.
T Consensus 153 v~~~~-~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~ 229 (377)
T 2ych_A 153 VAGVL-EALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEA 229 (377)
T ss_dssp HHHHH-HHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHH
T ss_pred HHHHH-HHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHH
Confidence 34433 3458899999999999999988864 2 3469999999999999999999875 47799999999999
Q ss_pred HHHhhhhhhhhhhhhHHHHhhcCCCCCCccccccccCCCHHHHHHHHHhceeec
Q psy9135 203 IRRGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFVT 256 (1107)
Q Consensus 203 L~~l~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~e~iKe~~c~v~ 256 (1107)
+.+. + ..+...+|++|+++++..
T Consensus 230 i~~~--------------~-----------------~~~~~~aE~~K~~~~~~~ 252 (377)
T 2ych_A 230 IARS--------------F-----------------NLDLLAAEEVKRTYGMAT 252 (377)
T ss_dssp HHHH--------------T-----------------TCCHHHHHHHHHHTC---
T ss_pred HHHH--------------h-----------------CCCHHHHHHHHhhccccc
Confidence 8775 1 124678899999887654
No 28
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.07 E-value=1.2e-09 Score=133.93 Aligned_cols=92 Identities=13% Similarity=0.059 Sum_probs=74.8
Q ss_pred CCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCC------ceEEEEEeCCCceEEEEeec------
Q psy9135 114 DKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV------NTGLVLDIGYSEATLLPVYE------ 181 (1107)
Q Consensus 114 ~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~------~tglVVDiG~~~T~V~PV~d------ 181 (1107)
-..++++.|..+...+|+.+.+. .+..|+..+.++.+|.+|++++|. .+.+|+|+|+++|+|+.+.-
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCC
Confidence 45789999999999999888765 578899999999999999988764 34899999999999988763
Q ss_pred CEec-ccceEEecccHHHHHHHHHHh
Q psy9135 182 GVPV-LCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 182 G~vl-~~~~~~~~iGG~~lt~~L~~l 206 (1107)
|..- .......++||.++++.|.+.
T Consensus 214 g~~~v~a~~gd~~lGG~d~D~~l~~~ 239 (605)
T 2kho_A 214 KTFEVLATNGDTHLGGEDFDSRLINY 239 (605)
T ss_dssp CEEEEEEEEEESSCSGGGTHHHHHHH
T ss_pred CeEEEEEECCCCCccHHHHHHHHHHH
Confidence 4332 122334689999999999988
No 29
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.02 E-value=1.2e-08 Score=119.54 Aligned_cols=94 Identities=13% Similarity=0.101 Sum_probs=74.0
Q ss_pred CCCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCCc--------eEEEEEeCCCceEEEEe--ec
Q psy9135 112 PKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVN--------TGLVLDIGYSEATLLPV--YE 181 (1107)
Q Consensus 112 ~~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~~--------tglVVDiG~~~T~V~PV--~d 181 (1107)
.....++++.|..+...+|+.+.+ ..+.-|+..+.++.+|.+++++++.. +.+|+|+|+++|+++-+ .+
T Consensus 148 ~~~~~~vitvPa~~~~~~r~~~~~-a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~ 226 (409)
T 4gni_A 148 KKVTSAVITIPTNFTEKQKAALIA-AAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRS 226 (409)
T ss_dssp SCCCEEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEET
T ss_pred CCCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeC
Confidence 345679999999999999887665 46778999999999999999998764 59999999999999874 34
Q ss_pred CEecccc-eEEecccHHHHHHHHHHh
Q psy9135 182 GVPVLCA-WKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 182 G~vl~~~-~~~~~iGG~~lt~~L~~l 206 (1107)
|..-.-+ ....++||.++|+.|.+.
T Consensus 227 ~~~~v~~~~~~~~lGG~~~d~~i~~~ 252 (409)
T 4gni_A 227 GMYTILATVHDYEYHGIALDKVLIDH 252 (409)
T ss_dssp TEEEEEEEEEESSSSHHHHHHHHHHH
T ss_pred CeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 3222112 234799999999999988
No 30
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.98 E-value=8e-09 Score=127.87 Aligned_cols=91 Identities=18% Similarity=0.123 Sum_probs=75.5
Q ss_pred CeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCC------------CceEEEEEeCCCceEEEEee--
Q psy9135 115 KRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLG------------VNTGLVLDIGYSEATLLPVY-- 180 (1107)
Q Consensus 115 ~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g------------~~tglVVDiG~~~T~V~PV~-- 180 (1107)
..+++|.|..++..+|+.+.+ ..+..|++.+.++++|.++++++| ..+.+|+|+|+++|+|+-+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~-Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIAD-AARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHH-HHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 579999999999999998876 558889999999999999988754 24689999999999998776
Q ss_pred cCEe-cccceEEecccHHHHHHHHHHh
Q psy9135 181 EGVP-VLCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 181 dG~v-l~~~~~~~~iGG~~lt~~L~~l 206 (1107)
+|.. +.......++||+++++.|.+.
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~ 244 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEH 244 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHH
Confidence 6765 2333345789999999999988
No 31
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=98.90 E-value=3.3e-09 Score=123.95 Aligned_cols=97 Identities=18% Similarity=0.195 Sum_probs=77.8
Q ss_pred CCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCce---------EEEEEcCCCceEEEEEE--c
Q psy9135 807 KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVNT---------GLVLDIGYSEATLLPVY--E 875 (1107)
Q Consensus 807 ~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~t---------glVVDiG~~~T~v~PV~--d 875 (1107)
....++++.|...+..+|+.+.+. ++..|++.+.++++|.+|+++++... -+|+|+|.++|.++.+- +
T Consensus 157 ~~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~ 235 (404)
T 3i33_A 157 KVHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIED 235 (404)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEET
T ss_pred CCCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeC
Confidence 345799999999999999988877 68899999999999999999887543 49999999999997664 4
Q ss_pred CEe-eccceEEEeccchHHHHHHHHHHHHhh
Q psy9135 876 GVP-VLCAWKDLSLGGGQSVESHIRSLLIDE 905 (1107)
Q Consensus 876 G~~-l~~~~~~~~~G~G~~lt~~L~~lL~~~ 905 (1107)
|.. +.......++| |.++++.|.+.+.++
T Consensus 236 ~~~~v~~~~~~~~lG-G~~~d~~l~~~l~~~ 265 (404)
T 3i33_A 236 GIFEVKSTAGDTHLG-GEDFDNRMVSHLAEE 265 (404)
T ss_dssp TEEEEEEEEEETTCS-HHHHHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCC-HHHHHHHHHHHHHHH
Confidence 332 22223346899 999999999988543
No 32
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.64 E-value=6.7e-07 Score=109.65 Aligned_cols=93 Identities=13% Similarity=0.051 Sum_probs=73.1
Q ss_pred CCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccCCC------ceEEEEEeCCCceEEEEeecCEe--
Q psy9135 113 KDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV------NTGLVLDIGYSEATLLPVYEGVP-- 184 (1107)
Q Consensus 113 ~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~------~tglVVDiG~~~T~V~PV~dG~v-- 184 (1107)
.-..+++|.|..++..+|+.+- -..+..|++-+.++.+|.+|++++|. .+-+|+|+|++++.|+-+.-+..
T Consensus 134 ~v~~~VITVPa~f~~~qr~a~~-~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~ 212 (605)
T 4b9q_A 134 PVTEAVITVPAYFNDAQRQATK-DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDG 212 (605)
T ss_dssp CCCEEEEEECTTCCHHHHHHHH-HHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSS
T ss_pred CCCeEEEEECCCCCHHHHHHHH-HHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCC
Confidence 3457899999999999998655 45678899999999999999988753 46799999999999997764431
Q ss_pred --c---ccceEEecccHHHHHHHHHHh
Q psy9135 185 --V---LCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 185 --l---~~~~~~~~iGG~~lt~~L~~l 206 (1107)
. .......++||.++++.|.+.
T Consensus 213 ~~~~evla~~gd~~lGG~d~D~~l~~~ 239 (605)
T 4b9q_A 213 EKTFEVLATNGDTHLGGEDFDSRLINY 239 (605)
T ss_dssp CEEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred CceEEEEEecCCCCcChHHHHHHHHHH
Confidence 1 112223678999999999988
No 33
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=98.43 E-value=8.8e-07 Score=108.61 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=76.3
Q ss_pred CceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCc------eEEEEEcCCCceEEEEEEc------
Q psy9135 808 DKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVN------TGLVLDIGYSEATLLPVYE------ 875 (1107)
Q Consensus 808 ~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~------tglVVDiG~~~T~v~PV~d------ 875 (1107)
-..++++.|...+..+|+.+.+.. +..|+..+.++++|.+|++++|.. +.+|+|+|++++.|+-+.-
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCC
Confidence 457899999999999999888775 667999999999999999887643 4799999999999988763
Q ss_pred CEe-eccceEEEeccchHHHHHHHHHHHHhh
Q psy9135 876 GVP-VLCAWKDLSLGGGQSVESHIRSLLIDE 905 (1107)
Q Consensus 876 G~~-l~~~~~~~~~G~G~~lt~~L~~lL~~~ 905 (1107)
|.. +.......++| |.++++.|.+.+.++
T Consensus 214 g~~~v~a~~gd~~lG-G~d~D~~l~~~l~~~ 243 (605)
T 2kho_A 214 KTFEVLATNGDTHLG-GEDFDSRLINYLVEE 243 (605)
T ss_dssp CEEEEEEEEEESSCS-GGGTHHHHHHHHHHH
T ss_pred CeEEEEEECCCCCcc-HHHHHHHHHHHHHHH
Confidence 432 11122335799 999999999888664
No 34
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=98.40 E-value=2.3e-06 Score=103.83 Aligned_cols=94 Identities=16% Similarity=0.167 Sum_probs=77.6
Q ss_pred ceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCC-------ceEEEEEcCCCceEEEEEE--cCEe-
Q psy9135 809 KRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV-------NTGLVLDIGYSEATLLPVY--EGVP- 878 (1107)
Q Consensus 809 ~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~-------~tglVVDiG~~~T~v~PV~--dG~~- 878 (1107)
..++++.|...+..+|+.+.+. ++..|++.+.++++|.+|++++|. .+.+|+|+|++++.++-+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~A-~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKDA-GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 5799999999999999988874 577899999999999999988763 4689999999999999776 5753
Q ss_pred eccceEEEeccchHHHHHHHHHHHHh
Q psy9135 879 VLCAWKDLSLGGGQSVESHIRSLLID 904 (1107)
Q Consensus 879 l~~~~~~~~~G~G~~lt~~L~~lL~~ 904 (1107)
+.......++| |+++++.|.+.+.+
T Consensus 219 v~a~~g~~~lG-G~d~d~~l~~~l~~ 243 (554)
T 1yuw_A 219 VKSTAGDTHLG-GEDFDNRMVNHFIA 243 (554)
T ss_dssp EEEEEEETTCS-HHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCC-HHHHHHHHHHHHHH
Confidence 22234446899 99999999988864
No 35
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.35 E-value=2.4e-06 Score=99.94 Aligned_cols=94 Identities=13% Similarity=0.106 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHhhcCcceEEEecchhhhhccCCC-----ceEEEEEeCCCceEEEEeecCEecccceEEecccHHHHHH
Q psy9135 127 TVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV-----NTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEA 201 (1107)
Q Consensus 127 ~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~g~-----~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~ 201 (1107)
+...+.+.+ .+|.-|+.-..+..+|+++++++.. .+.+|||+|+++|+++-+.+|.+... ..+++||+++|+
T Consensus 167 ~~~v~n~~~-~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~~--~~i~~GG~~it~ 243 (419)
T 4a2a_A 167 LKVYEMFYN-FLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKI--SYVPVGMKHVIK 243 (419)
T ss_dssp HHHHHHHHH-HHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEEE--EEESCCHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEEE--EecccHHHHHHH
Confidence 444444443 4678899999999999999988765 36899999999999999999998854 679999999999
Q ss_pred HHHHhhhhhhhhhhhhHHHHhhcCCCCCCccccccccCCCHHHHHHHHHhcee
Q psy9135 202 HIRRGQSVESHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCF 254 (1107)
Q Consensus 202 ~L~~l~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~e~iKe~~c~ 254 (1107)
-+.+. +. .+...+|++|.++..
T Consensus 244 dIa~~--------------l~-----------------~~~~~AE~iK~~~g~ 265 (419)
T 4a2a_A 244 DVSAV--------------LD-----------------TSFEESERLIITHGN 265 (419)
T ss_dssp HHHHH--------------HT-----------------CCHHHHHHHHHHHCC
T ss_pred HHHHH--------------HC-----------------CCHHHHHHHHHHhcc
Confidence 99876 21 357889999988753
No 36
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.23 E-value=3.7e-06 Score=98.17 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=76.0
Q ss_pred CCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCCc--------eEEEEEcCCCceEEEEE--Ec
Q psy9135 806 PKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVN--------TGLVLDIGYSEATLLPV--YE 875 (1107)
Q Consensus 806 ~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~--------tglVVDiG~~~T~v~PV--~d 875 (1107)
.....++++.|...+..+|+.+.+.+ +.-|+..+.++++|.+|+++++.. +-+|+|+|.++|.++-+ .+
T Consensus 148 ~~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~ 226 (409)
T 4gni_A 148 KKVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRS 226 (409)
T ss_dssp SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEET
T ss_pred CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeC
Confidence 34567999999999999998877765 567889999999999999988764 58999999999998775 23
Q ss_pred CEee-ccceEEEeccchHHHHHHHHHHHHhh
Q psy9135 876 GVPV-LCAWKDLSLGGGQSVESHIRSLLIDE 905 (1107)
Q Consensus 876 G~~l-~~~~~~~~~G~G~~lt~~L~~lL~~~ 905 (1107)
|..- .......++| |.++|+.|.+.+.++
T Consensus 227 ~~~~v~~~~~~~~lG-G~~~d~~i~~~l~~~ 256 (409)
T 4gni_A 227 GMYTILATVHDYEYH-GIALDKVLIDHFSKE 256 (409)
T ss_dssp TEEEEEEEEEESSSS-HHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCCcC-HHHHHHHHHHHHHHH
Confidence 3211 1112346899 999999999998765
No 37
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=98.22 E-value=5.9e-06 Score=94.21 Aligned_cols=164 Identities=16% Similarity=0.091 Sum_probs=115.9
Q ss_pred eEEEecCcceEEEeccCCCCccEEEecceeccCCCC--------------------ccceeecC--------CHHhhHHH
Q psy9135 738 GVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNK--------------------LRNLYEYK--------DADDLYGL 789 (1107)
Q Consensus 738 ~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~--------------------~~~~~~~~--------~~~~~~d~ 789 (1107)
.+-||+|+.++|+-. ++ .-...+||+++...... .+.+.+|+ +.+.+ +.
T Consensus 23 ~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~~~l~~~~~~~-~~ 99 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIRVPQGDGRLAS-KE 99 (346)
T ss_dssp EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCBCCSSTTCTTS-TT
T ss_pred EEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEccceecccCCCcccC-hh
Confidence 589999999999875 32 23557888887654321 12333442 23334 55
Q ss_pred HHHHHHHHHHhcc-ccCCCCceEE--EEeccCCchHHHHHHHHHHhcc-------------cCcceeeecccchhhhccc
Q psy9135 790 LIEFIRKIFFKYF-VTSPKDKRIV--VVESVLTPTVWRNTLAKVLFKH-------------YEVLSLLYVPSHLVSLCTL 853 (1107)
Q Consensus 790 le~i~~~~~~~~L-~~~~~~~~vl--l~e~~~~~~~~re~l~eiLFE~-------------~~vpsv~~~~~~~lalya~ 853 (1107)
.+.++.+.+.+.. .-......++ ++.|......+|+.+-+.+... +++..+.++++|.+|++++
T Consensus 100 ~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~ 179 (346)
T 2fsj_A 100 AFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYL 179 (346)
T ss_dssp THHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHh
Confidence 5666666665433 1112345689 9999988888898888886553 2367799999999999974
Q ss_pred --C-----C-ceEEEEEcCCCceEEEEEE--cCEeeccceEEEeccchHHHHHHHHHHHHhh
Q psy9135 854 --G-----V-NTGLVLDIGYSEATLLPVY--EGVPVLCAWKDLSLGGGQSVESHIRSLLIDE 905 (1107)
Q Consensus 854 --g-----~-~tglVVDiG~~~T~v~PV~--dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~ 905 (1107)
+ . .+-+|||+|.++|.++-+. +|.++.......++| |+++++.+.+.++++
T Consensus 180 l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lG-g~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 180 LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIG-VGDAISALSRKIAKE 240 (346)
T ss_dssp HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCC-HHHHHHHHHHHHHHH
T ss_pred hccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchh-HHHHHHHHHHHHHHH
Confidence 2 1 3459999999999999888 787666556788999 999999999988765
No 38
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.22 E-value=5.3e-06 Score=93.60 Aligned_cols=68 Identities=15% Similarity=0.269 Sum_probs=56.8
Q ss_pred hhcCcceEEEecchhhhhccCC-----CceEEEEEeCCCceEEEEeecCEe-cccceEEecccHHHHHHHHHHh
Q psy9135 139 KHYEVLSLLYVPSHLVSLCTLG-----VNTGLVLDIGYSEATLLPVYEGVP-VLCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 139 E~~~vpsv~~~~~~lls~y~~g-----~~tglVVDiG~~~T~V~PV~dG~v-l~~~~~~~~iGG~~lt~~L~~l 206 (1107)
+.+++..+.+.+++++++++++ ..+.+|||+|+.+|+++-+.+|.+ +.......++||.++++.+.+.
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~ 209 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDA 209 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHH
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHH
Confidence 4556788999999999998753 357899999999999999999886 3334567799999999999988
No 39
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.20 E-value=1.7e-05 Score=91.43 Aligned_cols=93 Identities=20% Similarity=0.246 Sum_probs=70.0
Q ss_pred HHHHHHHhcccCcceeeecccchhhhcccC------C-ceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHHHH
Q psy9135 825 NTLAKVLFKHYEVLSLLYVPSHLVSLCTLG------V-NTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESH 897 (1107)
Q Consensus 825 e~l~eiLFE~~~vpsv~~~~~~~lalya~g------~-~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~ 897 (1107)
+.+.+ +++..|+.-..+..++++++++++ + ...+|||+|++.|.++.+.+|.+.. ....++| |.++|+.
T Consensus 154 ~~~~~-~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~G-G~~i~~~ 229 (377)
T 2ych_A 154 AGVLE-ALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLS-GKDFTEA 229 (377)
T ss_dssp HHHHH-HHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCS-HHHHHHH
T ss_pred HHHHH-HHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeech-HHHHHHH
Confidence 44433 347789999999999999988864 2 3459999999999999999998874 4678999 9999998
Q ss_pred HHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHHhceeecc
Q psy9135 898 IRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFVTT 942 (1107)
Q Consensus 898 L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe~~c~v~~ 942 (1107)
+.+.+ .++...++++|++++++..
T Consensus 230 i~~~~---------------------~~~~~~aE~~K~~~~~~~~ 253 (377)
T 2ych_A 230 IARSF---------------------NLDLLAAEEVKRTYGMATL 253 (377)
T ss_dssp HHHHT---------------------TCCHHHHHHHHHHTC----
T ss_pred HHHHh---------------------CCCHHHHHHHHhhcccccc
Confidence 87732 1223478999999887654
No 40
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=98.16 E-value=8.2e-06 Score=93.05 Aligned_cols=159 Identities=16% Similarity=0.103 Sum_probs=104.7
Q ss_pred EEEecCCceeEEeeecCcccccccccceeccCCc--------------------cccceeccCchh--------hHHHHH
Q psy9135 45 VVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTN--------------------KLRNLYEYKDAD--------DLYGLL 96 (1107)
Q Consensus 45 iViD~GS~~~K~G~age~~P~~i~ps~v~~~~~~--------------------~~~~~~~~~~~~--------~~~~~l 96 (1107)
|-||.|+.++|+- .++ .-...+||+++..... ..+.+.+|+.+. .. +..
T Consensus 24 igiDlG~~~tkv~-~~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~~~l~~~~~~~-~~~ 100 (346)
T 2fsj_A 24 VGLDVGYGDTKVI-GVD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIRVPQGDGRLAS-KEA 100 (346)
T ss_dssp EEEEECSSEEEEE-CGG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCBCCSSTTCTTS-TTT
T ss_pred EEEecCCcceeEE-ecC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEccceecccCCCcccC-hhH
Confidence 3466666666663 232 2344677777654331 012333443221 22 344
Q ss_pred HHHHHHHHhhcc-ccCCCCCeEE--EEecCCCcHHHHHHHHHHHHhh-------------cCcceEEEecchhhhhccC-
Q psy9135 97 IEFIRKIFFKYF-VTSPKDKRIV--VVESVLTPTVWRNTLAKVLFKH-------------YEVLSLLYVPSHLVSLCTL- 159 (1107)
Q Consensus 97 e~i~~~~~~~~L-~~~~~~~~vl--lte~~~~~~~~re~l~eilFE~-------------~~vpsv~~~~~~lls~y~~- 159 (1107)
+.++.+.+.+.. ........++ ++.|......+|+.+-+.+... +++..+.+.++|.+|++++
T Consensus 101 ~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~l 180 (346)
T 2fsj_A 101 FPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLL 180 (346)
T ss_dssp HHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHhh
Confidence 555666664432 1112345688 9999887788888888875543 2367799999999999974
Q ss_pred -C-----C-ceEEEEEeCCCceEEEEee--cCEecccceEEecccHHHHHHHHHHh
Q psy9135 160 -G-----V-NTGLVLDIGYSEATLLPVY--EGVPVLCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 160 -g-----~-~tglVVDiG~~~T~V~PV~--dG~vl~~~~~~~~iGG~~lt~~L~~l 206 (1107)
+ . .+.+|||+|+.+|.++-+. +|.++.......++||+++++.+.+.
T Consensus 181 ~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~ 236 (346)
T 2fsj_A 181 NQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRK 236 (346)
T ss_dssp HHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHH
T ss_pred ccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHH
Confidence 2 1 3459999999999999998 88866655678899999999999887
No 41
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.16 E-value=2.5e-06 Score=96.64 Aligned_cols=163 Identities=9% Similarity=-0.060 Sum_probs=103.7
Q ss_pred eEEEecCCceeEEeee--c---CcccccccccceeccCCcc-------c------cceeccCchh-----hHH--HHHHH
Q psy9135 44 GVVLDIGSKYTKYGIF--G---SFQPKGFIKSQVKDPHTNK-------L------RNLYEYKDAD-----DLY--GLLIE 98 (1107)
Q Consensus 44 ~iViD~GS~~~K~G~a--g---e~~P~~i~ps~v~~~~~~~-------~------~~~~~~~~~~-----~~~--~~le~ 98 (1107)
.|-||.|-+++|+-.. | +..-+..|||.++..+... . +.+++|+.+. .++ +...-
T Consensus 9 iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~~~~~~k~~~~~~~ 88 (329)
T 4apw_A 9 VMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVEDSSETSKTNLIHKL 88 (329)
T ss_dssp EEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSCSGGGCCCTTHHHH
T ss_pred EEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccccccCCcCchhHHH
Confidence 4568888888887542 2 1123457899988654211 0 2334444221 111 12233
Q ss_pred HHHHHHhhccccC-CCCCeEEEEecCCCc--HHHHHHHHHHHHhh-------------cCcceEEEecchhhhhccC---
Q psy9135 99 FIRKIFFKYFVTS-PKDKRIVVVESVLTP--TVWRNTLAKVLFKH-------------YEVLSLLYVPSHLVSLCTL--- 159 (1107)
Q Consensus 99 i~~~~~~~~L~~~-~~~~~vllte~~~~~--~~~re~l~eilFE~-------------~~vpsv~~~~~~lls~y~~--- 159 (1107)
++..++...+... ..+-.+++.-|...- ...|+++.+.|-.. +.+..+.+.++++.++|..
T Consensus 89 L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~~~ 168 (329)
T 4apw_A 89 AAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQEN 168 (329)
T ss_dssp HHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSCCC
T ss_pred HHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcchh
Confidence 3444443434332 122345555554322 23567777776632 2356799999999999876
Q ss_pred -CCceEEEEEeCCCceEEEEeecCEecccceEEecccHHHHHHHHHHh
Q psy9135 160 -GVNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 160 -g~~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l 206 (1107)
-..+.+|||||+.+|+++.+.+|.+.......+++||.++++.+.+.
T Consensus 169 ~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~ 216 (329)
T 4apw_A 169 FKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDA 216 (329)
T ss_dssp CTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTS
T ss_pred hccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHH
Confidence 23678999999999999999999998777788999999999999988
No 42
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.14 E-value=1.3e-05 Score=99.27 Aligned_cols=94 Identities=18% Similarity=0.160 Sum_probs=76.3
Q ss_pred ceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCC------------ceEEEEEcCCCceEEEEEE--
Q psy9135 809 KRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV------------NTGLVLDIGYSEATLLPVY-- 874 (1107)
Q Consensus 809 ~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~------------~tglVVDiG~~~T~v~PV~-- 874 (1107)
..++|+.|...+..+|+.+.+.. +..|++.+.++++|.+|++++|. .+.+|+|+|+++|.|+-+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 57899999999999999888755 67899999999999999887642 4689999999999998775
Q ss_pred cCEe-eccceEEEeccchHHHHHHHHHHHHh
Q psy9135 875 EGVP-VLCAWKDLSLGGGQSVESHIRSLLID 904 (1107)
Q Consensus 875 dG~~-l~~~~~~~~~G~G~~lt~~L~~lL~~ 904 (1107)
+|.. +.......++| |.++++.|.+.+.+
T Consensus 218 ~g~~~V~a~~gd~~lG-G~d~D~~l~~~l~~ 247 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFG-GRDFDLAITEHFAD 247 (675)
T ss_dssp TTEEEEEEEEEETTCS-HHHHHHHHHHHHHH
T ss_pred CCeEEEEEEcCCCCcc-HHHHHHHHHHHHHH
Confidence 5654 22223346899 99999999999864
No 43
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.11 E-value=1.5e-05 Score=90.97 Aligned_cols=92 Identities=16% Similarity=0.010 Sum_probs=74.9
Q ss_pred CeEEEEecCCCcHHHH-HHHHHHHHhh-----------cCcceEEEecchhhhhccCC-----------CceEEEEEeCC
Q psy9135 115 KRIVVVESVLTPTVWR-NTLAKVLFKH-----------YEVLSLLYVPSHLVSLCTLG-----------VNTGLVLDIGY 171 (1107)
Q Consensus 115 ~~vllte~~~~~~~~r-e~l~eilFE~-----------~~vpsv~~~~~~lls~y~~g-----------~~tglVVDiG~ 171 (1107)
-.+++..|.-.-...| +.+.+.+... +.+..+.+.+++++|+++++ ....+|||||+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3567777776555555 5677777633 23478999999999999875 45679999999
Q ss_pred CceEEEEeecCEecccceEEecccHHHHHHHHHHh
Q psy9135 172 SEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 172 ~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l 206 (1107)
.+|.++.+.+|.+.......+++||..+++.+.+.
T Consensus 194 gTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~ 228 (355)
T 3js6_A 194 GTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASH 228 (355)
T ss_dssp SCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHH
T ss_pred CcEEEEEEcCCEEccccccCcchHHHHHHHHHHHH
Confidence 99999999999999888889999999999999998
No 44
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=97.82 E-value=8.7e-05 Score=90.92 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=73.9
Q ss_pred CceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcccCC------ceEEEEEcCCCceEEEEEEcCE----
Q psy9135 808 DKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGV------NTGLVLDIGYSEATLLPVYEGV---- 877 (1107)
Q Consensus 808 ~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~------~tglVVDiG~~~T~v~PV~dG~---- 877 (1107)
-..++|+.|...+..+|+.+.+.. +.-|++-+.++++|.+|++++|. .+-+|+|+|.+++.++-+.-+.
T Consensus 135 v~~~VITVPa~f~~~qr~a~~~Aa-~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 4b9q_A 135 VTEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSC
T ss_pred CCeEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCC
Confidence 457899999999999998776664 56788999999999999988753 4578999999999998775443
Q ss_pred ee---ccceEEEeccchHHHHHHHHHHHHhh
Q psy9135 878 PV---LCAWKDLSLGGGQSVESHIRSLLIDE 905 (1107)
Q Consensus 878 ~l---~~~~~~~~~G~G~~lt~~L~~lL~~~ 905 (1107)
.. .......++| |.++++.|.+.|.++
T Consensus 214 ~~~evla~~gd~~lG-G~d~D~~l~~~l~~~ 243 (605)
T 4b9q_A 214 KTFEVLATNGDTHLG-GEDFDSRLINYLVEE 243 (605)
T ss_dssp EEEEEEEEEEETTCS-HHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCCCcC-hHHHHHHHHHHHHHH
Confidence 11 1112224678 999999999888754
No 45
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=97.46 E-value=0.00057 Score=76.82 Aligned_cols=72 Identities=17% Similarity=0.247 Sum_probs=58.8
Q ss_pred cccCcceeeecccchhhhcccC-----CceEEEEEcCCCceEEEEEEcCEe-eccceEEEeccchHHHHHHHHHHHHhh
Q psy9135 833 KHYEVLSLLYVPSHLVSLCTLG-----VNTGLVLDIGYSEATLLPVYEGVP-VLCAWKDLSLGGGQSVESHIRSLLIDE 905 (1107)
Q Consensus 833 E~~~vpsv~~~~~~~lalya~g-----~~tglVVDiG~~~T~v~PV~dG~~-l~~~~~~~~~G~G~~lt~~L~~lL~~~ 905 (1107)
+.+++..+.+.+++.+++++.+ ..+.+|||+|++.|.++-+.+|.+ +.......++| |.++++.+.+.+.++
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lG-g~~~~~~I~~~l~~~ 213 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLG-VSLVTSAVKDALSLA 213 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCC-THHHHHHHHHHTTCC
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCcccc-HHHHHHHHHHHHHHc
Confidence 4556788999999999998753 346899999999999999999876 43345667999 999999999988653
No 46
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=97.28 E-value=0.0029 Score=72.11 Aligned_cols=164 Identities=16% Similarity=0.054 Sum_probs=109.0
Q ss_pred eEEEecCcceEEEeccCCCCccEEEecceeccCCC------------C---------ccc-eeecCCHHhh-------H-
Q psy9135 738 GVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTN------------K---------LRN-LYEYKDADDL-------Y- 787 (1107)
Q Consensus 738 ~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~------------~---------~~~-~~~~~~~~~~-------~- 787 (1107)
.|=||+|-+++|+ ..++ =...|||.++..... + ... .++|+.+... +
T Consensus 6 iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~~~~~~~ 82 (355)
T 3js6_A 6 VMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNTGKDTAS 82 (355)
T ss_dssp EEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSCCEECCC
T ss_pred EEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcccccccc
Confidence 5789999999995 4443 256788888643211 0 023 5566543210 0
Q ss_pred -------HHHHHHHHHHHH---hccccCCCCceEEEEeccCCchHHH-HHHHHHHhcc-----------cCcceeeeccc
Q psy9135 788 -------GLLIEFIRKIFF---KYFVTSPKDKRIVVVESVLTPTVWR-NTLAKVLFKH-----------YEVLSLLYVPS 845 (1107)
Q Consensus 788 -------d~le~i~~~~~~---~~L~~~~~~~~vll~e~~~~~~~~r-e~l~eiLFE~-----------~~vpsv~~~~~ 845 (1107)
+....++..++. ..+..+..+-.+++..|.-.....| +++.+.+-.. +.+..+.+.++
T Consensus 83 ~~~k~~~~~~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE 162 (355)
T 3js6_A 83 TNDRYDIKSFKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQ 162 (355)
T ss_dssp STTGGGSHHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEH
T ss_pred cCCcccCHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeC
Confidence 112222222221 1110011233577778877666665 5788887643 23478999999
Q ss_pred chhhhcccC-----------CceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHhh
Q psy9135 846 HLVSLCTLG-----------VNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDE 905 (1107)
Q Consensus 846 ~~lalya~g-----------~~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~ 905 (1107)
++.|+++.+ ..+-+|||+|+.+|.++-+.+|.+.......+++| |..+++.+.+.++++
T Consensus 163 ~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G-~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 163 PMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKG-TIDFYKRIASHVSKK 232 (355)
T ss_dssp HHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCC-HHHHHHHHHHHTC--
T ss_pred cHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchH-HHHHHHHHHHHHHHh
Confidence 999999875 34578999999999999998999988888889999 999999999999765
No 47
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=97.27 E-value=0.0006 Score=76.96 Aligned_cols=167 Identities=10% Similarity=-0.055 Sum_probs=111.3
Q ss_pred ceEEEecCcceEEEecc--C---CCCccEEEecceeccCCCC-------------ccceeecCCHH-----hh--HHHHH
Q psy9135 737 TGVVLDIGSKYTKYGIF--G---SFQPKGFIKSQVKDPHTNK-------------LRNLYEYKDAD-----DL--YGLLI 791 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~a--g---e~~P~~i~ps~vg~~~~~~-------------~~~~~~~~~~~-----~~--~d~le 791 (1107)
-.|-||+|-+++|+-.. | +..-+..|||.++...... -+.+++|+++. .+ -+...
T Consensus 8 ~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~~~~~~k~~~~~~ 87 (329)
T 4apw_A 8 YVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVEDSSETSKTNLIHK 87 (329)
T ss_dssp EEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSCSGGGCCCTTHHH
T ss_pred eEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccccccCCcCchhHH
Confidence 46789999999998653 2 2334577999987643211 03444554221 11 12233
Q ss_pred HHHHHHHHhccccC-CCCceEEEEeccCCch--HHHHHHHHHHhcc-------------cCcceeeecccchhhhcccC-
Q psy9135 792 EFIRKIFFKYFVTS-PKDKRIVVVESVLTPT--VWRNTLAKVLFKH-------------YEVLSLLYVPSHLVSLCTLG- 854 (1107)
Q Consensus 792 ~i~~~~~~~~L~~~-~~~~~vll~e~~~~~~--~~re~l~eiLFE~-------------~~vpsv~~~~~~~lalya~g- 854 (1107)
-++..++-..++.. ..+..+++..|...-. +.|+++.+.|-.. +.+..+.+.|+++.++|...
T Consensus 88 ~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~~ 167 (329)
T 4apw_A 88 LAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQE 167 (329)
T ss_dssp HHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSCC
T ss_pred HHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcch
Confidence 34445553444432 1223456666654432 3577777777632 33567899999999998762
Q ss_pred ---CceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHh
Q psy9135 855 ---VNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLID 904 (1107)
Q Consensus 855 ---~~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~ 904 (1107)
..+-+|||+|+.+|.++-+.+|.+.......+++| |..+++.+.+.+++
T Consensus 168 ~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G-~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 168 NFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHG-VKDLIIRVGDALTD 219 (329)
T ss_dssp CCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCC-HHHHHHHHHTSSSS
T ss_pred hhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhH-HHHHHHHHHHHHHh
Confidence 34678999999999999999999987777889999 99999999988876
No 48
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=96.27 E-value=0.0091 Score=69.54 Aligned_cols=95 Identities=14% Similarity=0.111 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHhcccCcceeeecccchhhhcccCCc-----eEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHH
Q psy9135 821 TVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTLGVN-----TGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVE 895 (1107)
Q Consensus 821 ~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~g~~-----tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt 895 (1107)
+...+.+.++ +|.-|+.-..+..+|+++.+++... ..+|||+|++.|.++-+.+|.+.. ....++| |+++|
T Consensus 167 ~~~v~n~~~~-~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~G-G~~it 242 (419)
T 4a2a_A 167 LKVYEMFYNF-LQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVG-MKHVI 242 (419)
T ss_dssp HHHHHHHHHH-HHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCC-HHHHH
T ss_pred HHHHHHHHHH-HHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccH-HHHHH
Confidence 3444555544 4667888888999999999887643 589999999999999999998874 4678999 99999
Q ss_pred HHHHHHHHhhcccCCCCCCCccchhhhhcccHHHHHHHHHhceee
Q psy9135 896 SHIRSLLIDEIKALENPDPYIVTVEDVENLSDSIIEDIKVCSCFV 940 (1107)
Q Consensus 896 ~~L~~lL~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~iKe~~c~v 940 (1107)
+.+.+.+. ++.+.++.+|.++...
T Consensus 243 ~dIa~~l~---------------------~~~~~AE~iK~~~g~a 266 (419)
T 4a2a_A 243 KDVSAVLD---------------------TSFEESERLIITHGNA 266 (419)
T ss_dssp HHHHHHHT---------------------CCHHHHHHHHHHHCCS
T ss_pred HHHHHHHC---------------------CCHHHHHHHHHHhccC
Confidence 98887652 2344789999987654
No 49
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.00 E-value=0.058 Score=63.01 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=52.6
Q ss_pred HHHHHHHhhcCcceEEEecchhhhhccC----CC-ceEEEEEeCCCceEEEEeecCEecccceEEecccHHHHHHHHHHh
Q psy9135 132 TLAKVLFKHYEVLSLLYVPSHLVSLCTL----GV-NTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 132 ~l~eilFE~~~vpsv~~~~~~lls~y~~----g~-~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l 206 (1107)
++.+.+=++++++-=.=.-++++|.+++ ++ .-.++||+|+.+|++.-+.+|..+.- ..+++||+++|..+..-
T Consensus 372 NI~~cVer~~gL~veV~g~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a--~~ip~gG~~VT~DIA~~ 449 (610)
T 2d0o_A 372 MIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIA--THLAGAGDMVTMIIARE 449 (610)
T ss_dssp HHHHHHHHHHCCEEEEEEEHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEE--EEEECSHHHHHHHHHHH
T ss_pred HHHHHHHhccCCcceeccccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHH
Confidence 3444444444442111116777777764 33 45789999999999999999998854 78999999999999887
No 50
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=95.68 E-value=0.038 Score=64.78 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=46.0
Q ss_pred cchhhhhccC----CC-ceEEEEEeCCCceEEEEeecCEecccceEEecccHHHHHHHHHHh
Q psy9135 150 PSHLVSLCTL----GV-NTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 150 ~~~lls~y~~----g~-~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~lt~~L~~l 206 (1107)
-++++|.+++ ++ .-.++||+|+.+|++.-+.+|....- ..+++||+++|..+..-
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a--~~ip~gG~~VT~DIA~~ 451 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITA--VHLAGAGNMVSLLIKTE 451 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEE--EEEECCHHHHHHHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHH
Confidence 6677777764 33 45789999999999999999988854 78999999999999887
No 51
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=91.72 E-value=0.73 Score=51.21 Aligned_cols=77 Identities=8% Similarity=-0.075 Sum_probs=56.0
Q ss_pred cHHHHHHHHHHHHhhcCcceEEEe--cchhhhhcc----CC-CceEEEEEeCCCceEEEEeecCEecccceEEecccHHH
Q psy9135 126 PTVWRNTLAKVLFKHYEVLSLLYV--PSHLVSLCT----LG-VNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQS 198 (1107)
Q Consensus 126 ~~~~re~l~eilFE~~~vpsv~~~--~~~lls~y~----~g-~~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~ 198 (1107)
.-.+++.+.+.+-+..|++-=.+. +++.++..| .+ ..+++|||||.++|.++-..+|.+.. ...+++|+-.
T Consensus 95 ~A~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~~G~v~ 172 (315)
T 1t6c_A 95 RAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVRE--VISLPIGIVN 172 (315)
T ss_dssp TSTTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEEE--EEEECCCHHH
T ss_pred cCcCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCceee--EEEEeccHHH
Confidence 345667788888888888633332 333343322 23 56899999999999999998888754 4789999999
Q ss_pred HHHHHH
Q psy9135 199 VEAHIR 204 (1107)
Q Consensus 199 lt~~L~ 204 (1107)
+++.+.
T Consensus 173 l~e~~~ 178 (315)
T 1t6c_A 173 LTETFF 178 (315)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 988764
No 52
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=91.17 E-value=1 Score=49.92 Aligned_cols=76 Identities=12% Similarity=0.125 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhhcCcceEEE--ecchhhhhcc------CCCceEEEEEeCCCceEEEEeecCEecccceEEecccHHH
Q psy9135 127 TVWRNTLAKVLFKHYEVLSLLY--VPSHLVSLCT------LGVNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQS 198 (1107)
Q Consensus 127 ~~~re~l~eilFE~~~vpsv~~--~~~~lls~y~------~g~~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~ 198 (1107)
-.+++.+.+-+-+..|++-=.+ -.++-++.+| ....+++|||||.++|.++-+.+|.+.. ...+++|.-.
T Consensus 88 A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vr 165 (315)
T 3mdq_A 88 GSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQR 165 (315)
T ss_dssp CTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHH
T ss_pred CcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEee--eEEEechhhH
Confidence 3456677778888888863333 2344443333 2236799999999999999999987764 4789999988
Q ss_pred HHHHHH
Q psy9135 199 VEAHIR 204 (1107)
Q Consensus 199 lt~~L~ 204 (1107)
+++.+.
T Consensus 166 l~e~f~ 171 (315)
T 3mdq_A 166 LIDRFH 171 (315)
T ss_dssp HHHHSC
T ss_pred HHHHhc
Confidence 887654
No 53
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=90.38 E-value=1.5 Score=48.63 Aligned_cols=74 Identities=8% Similarity=-0.028 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHhcccCcceeeecc---cchhhhcc----cC-CceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchH
Q psy9135 821 TVWRNTLAKVLFKHYEVLSLLYVP---SHLVSLCT----LG-VNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQ 892 (1107)
Q Consensus 821 ~~~re~l~eiLFE~~~vpsv~~~~---~~~lalya----~g-~~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~ 892 (1107)
-.+++.+.+.+-+..|++ +-++. ++.++..| .+ ..+++|||+|.++|.++-..+|.+. ....+|+| +-
T Consensus 96 A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G-~v 171 (315)
T 1t6c_A 96 AKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIG-IV 171 (315)
T ss_dssp STTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCC-HH
T ss_pred CcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEecc-HH
Confidence 345667777777777775 33433 23333322 23 5679999999999999998888765 46789999 77
Q ss_pred HHHHHH
Q psy9135 893 SVESHI 898 (1107)
Q Consensus 893 ~lt~~L 898 (1107)
.+++.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 766644
No 54
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=89.55 E-value=0.74 Score=51.81 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhcccCcceeeecc---cchhhhccc--------CCceEEEEEcCCCceEEEEEEc--CEee--ccceEEE
Q psy9135 822 VWRNTLAKVLFKHYEVLSLLYVP---SHLVSLCTL--------GVNTGLVLDIGYSEATLLPVYE--GVPV--LCAWKDL 886 (1107)
Q Consensus 822 ~~re~l~eiLFE~~~vpsv~~~~---~~~lalya~--------g~~tglVVDiG~~~T~v~PV~d--G~~l--~~~~~~~ 886 (1107)
.+++.+.+-+-+..|++ +-+++ ++.++..|. ...+++|||+|.++|.++-+.+ +.+. ......+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 45566777777777765 33332 333333332 2356999999999999997766 4331 1256789
Q ss_pred eccchHHHHHHH
Q psy9135 887 SLGGGQSVESHI 898 (1107)
Q Consensus 887 ~~G~G~~lt~~L 898 (1107)
|+| +..+++.+
T Consensus 181 plG-~v~lt~~~ 191 (343)
T 3cer_A 181 NIG-SVRMTERH 191 (343)
T ss_dssp SCC-HHHHHHHT
T ss_pred ehh-HHHHHHHh
Confidence 999 87777654
No 55
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=88.71 E-value=1.6 Score=49.07 Aligned_cols=77 Identities=13% Similarity=0.071 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhhcCcceEEE--ecchhhhhccC--------CCceEEEEEeCCCceEEEEeec--CEec--ccceEEec
Q psy9135 128 VWRNTLAKVLFKHYEVLSLLY--VPSHLVSLCTL--------GVNTGLVLDIGYSEATLLPVYE--GVPV--LCAWKDLS 193 (1107)
Q Consensus 128 ~~re~l~eilFE~~~vpsv~~--~~~~lls~y~~--------g~~tglVVDiG~~~T~V~PV~d--G~vl--~~~~~~~~ 193 (1107)
.+++.+.+-+-+..|++-=.+ -.++.++..|. ....++|||||.++|.++-+.+ +.+. ......++
T Consensus 102 ~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Slp 181 (343)
T 3cer_A 102 ENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMN 181 (343)
T ss_dssp TTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEES
T ss_pred cCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEEe
Confidence 556778888888888863333 23344444432 2356999999999999998877 4431 12467899
Q ss_pred ccHHHHHHHHH
Q psy9135 194 LGGQSVEAHIR 204 (1107)
Q Consensus 194 iGG~~lt~~L~ 204 (1107)
+|+..+++.+.
T Consensus 182 lG~v~lt~~~~ 192 (343)
T 3cer_A 182 IGSVRMTERHL 192 (343)
T ss_dssp CCHHHHHHHTC
T ss_pred hhHHHHHHHhc
Confidence 99999988763
No 56
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=88.30 E-value=0.95 Score=50.27 Aligned_cols=71 Identities=13% Similarity=0.141 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhcccCcceeeec---ccchhhhc------ccCCceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchH
Q psy9135 822 VWRNTLAKVLFKHYEVLSLLYV---PSHLVSLC------TLGVNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQ 892 (1107)
Q Consensus 822 ~~re~l~eiLFE~~~vpsv~~~---~~~~laly------a~g~~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~ 892 (1107)
.+++.+.+-+-+..|++ +-++ .++.++.+ .....+++|+|+|.++|.++-+.+|.+. ....+|+| .-
T Consensus 89 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG-~v 164 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIG-GQ 164 (315)
T ss_dssp TTHHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCC-HH
T ss_pred cCHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEech-hh
Confidence 45566666777777775 3333 23333322 2223579999999999999999888665 46789999 55
Q ss_pred HHHH
Q psy9135 893 SVES 896 (1107)
Q Consensus 893 ~lt~ 896 (1107)
.+++
T Consensus 165 rl~e 168 (315)
T 3mdq_A 165 RLID 168 (315)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 57
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=86.25 E-value=1.9 Score=51.15 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=54.8
Q ss_pred cHHHHHHHHHHHHhhcCcceEEE--ecchhhhhcc----CCCceEEEEEeCCCceEEEEeecCEecccceEEecccHHHH
Q psy9135 126 PTVWRNTLAKVLFKHYEVLSLLY--VPSHLVSLCT----LGVNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQSV 199 (1107)
Q Consensus 126 ~~~~re~l~eilFE~~~vpsv~~--~~~~lls~y~----~g~~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~l 199 (1107)
.-.+++.+.+-+-+..|++-=.+ -.++-++..| .....++|||||.++|.++-+.+|.+.. ...+++|.-.+
T Consensus 98 ~A~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl 175 (508)
T 3hi0_A 98 EAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCGE--GITLPLGGLRL 175 (508)
T ss_dssp HSTTHHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEECC--CEEESCCHHHH
T ss_pred cCcCHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeeee--EEEecceEEeh
Confidence 34556777778888888873333 2344444443 2345789999999999999999998864 48899999988
Q ss_pred HHH
Q psy9135 200 EAH 202 (1107)
Q Consensus 200 t~~ 202 (1107)
++.
T Consensus 176 ~e~ 178 (508)
T 3hi0_A 176 SEQ 178 (508)
T ss_dssp HHH
T ss_pred hhc
Confidence 875
No 58
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=85.77 E-value=1.1 Score=53.13 Aligned_cols=78 Identities=15% Similarity=0.041 Sum_probs=55.7
Q ss_pred cHHHHHHHHHHHHhhcCcceEEEe--cchhhhhccC----C-CceEEEEEeCCCceEEEEeecCEecccceEEecccHHH
Q psy9135 126 PTVWRNTLAKVLFKHYEVLSLLYV--PSHLVSLCTL----G-VNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGQS 198 (1107)
Q Consensus 126 ~~~~re~l~eilFE~~~vpsv~~~--~~~lls~y~~----g-~~tglVVDiG~~~T~V~PV~dG~vl~~~~~~~~iGG~~ 198 (1107)
.-.+++.+.+-+-+..|++-=.+. .++-++..|. . ...++|||||.++|.++-..+|.+.. ...+++|.-.
T Consensus 94 ~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vr 171 (513)
T 1u6z_A 94 QALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPIL--VESRRMGCVS 171 (513)
T ss_dssp HCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEEE--EEEESCCHHH
T ss_pred cCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeeeE--EEEEeccHHH
Confidence 335567788888888898643332 3344444431 2 23799999999999999988888763 4789999999
Q ss_pred HHHHHHH
Q psy9135 199 VEAHIRR 205 (1107)
Q Consensus 199 lt~~L~~ 205 (1107)
+++.+..
T Consensus 172 lte~f~~ 178 (513)
T 1u6z_A 172 FAQLYFP 178 (513)
T ss_dssp HHHHHSG
T ss_pred HHHHHcc
Confidence 9887643
No 59
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=85.36 E-value=4.5 Score=47.91 Aligned_cols=144 Identities=14% Similarity=0.084 Sum_probs=79.5
Q ss_pred ccceEEEecCcceEEEeccCCC--CccEEEecceeccCCCCccceeecCCH-----------HhhHHHHHHHHHHHHHhc
Q psy9135 735 LKTGVVLDIGSKYTKYGIFGSF--QPKGFIKSQVKDPHTNKLRNLYEYKDA-----------DDLYGLLIEFIRKIFFKY 801 (1107)
Q Consensus 735 ~~~~vViD~Gs~~iK~G~age~--~P~~i~ps~vg~~~~~~~~~~~~~~~~-----------~~~~d~le~i~~~~~~~~ 801 (1107)
.+..-|||+||.++|.-.+.-. .++.+..-. . .+--|.+. ..-++.+.++-+ .+ +.
T Consensus 14 ~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k--~-------~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~-~~-~~ 82 (508)
T 3hi0_A 14 LAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEK--V-------LCGLGKGLALTGRMHEEGVTRALMALRRFHV-LS-EQ 82 (508)
T ss_dssp CCCEEEEEECSSEEEEEEESCSSSSCCEEEEEE--E-------ECCTTTTHHHHSSCCHHHHHHHHHHHHHHHH-HH-HH
T ss_pred CCeEEEEEECCccEEEEEEEEcCCCceEEEEEe--E-------EeecccCccccCCcCHHHHHHHHHHHHHHHH-HH-Hh
Confidence 3457799999999998876432 343332110 0 01112221 222344443332 22 22
Q ss_pred cccCCCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecc---cchhhhcc----cCCceEEEEEcCCCceEEEEEE
Q psy9135 802 FVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVP---SHLVSLCT----LGVNTGLVLDIGYSEATLLPVY 874 (1107)
Q Consensus 802 L~~~~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~---~~~lalya----~g~~tglVVDiG~~~T~v~PV~ 874 (1107)
+++ ++..+ +.-+..-.-.+++.+.+-+-+..|++ +-+++ ++-++..| .....++|||||.++|.++-+-
T Consensus 83 ~~v--~~v~~-vATsA~R~A~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 83 AQA--QKLYV-LATAAAREAENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK 158 (508)
T ss_dssp TTC--SEEEE-EECTHHHHSTTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE
T ss_pred CCC--CeEEE-EeeHHHHcCcCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee
Confidence 332 23222 22223323345566666677777775 33332 33333332 2335689999999999999999
Q ss_pred cCEeeccceEEEeccchHHHHH
Q psy9135 875 EGVPVLCAWKDLSLGGGQSVES 896 (1107)
Q Consensus 875 dG~~l~~~~~~~~~G~G~~lt~ 896 (1107)
+|.+. ....+|+| .-.+++
T Consensus 159 ~~~~~--~~~Sl~lG-~vrl~e 177 (508)
T 3hi0_A 159 DKSCG--EGITLPLG-GLRLSE 177 (508)
T ss_dssp TTEEC--CCEEESCC-HHHHHH
T ss_pred CCeee--eEEEecce-EEehhh
Confidence 88775 45788999 766665
No 60
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=85.26 E-value=1.9 Score=51.19 Aligned_cols=74 Identities=15% Similarity=0.056 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHhcccCcceeeecc---cchhhhcc----cC-CceEEEEEcCCCceEEEEEEcCEeeccceEEEeccchH
Q psy9135 821 TVWRNTLAKVLFKHYEVLSLLYVP---SHLVSLCT----LG-VNTGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQ 892 (1107)
Q Consensus 821 ~~~re~l~eiLFE~~~vpsv~~~~---~~~lalya----~g-~~tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~ 892 (1107)
-.+++.+.+-+-+..|++ +-+++ ++-++..| .. ...++|||||.++|.++-..+|.+. ....+|+| .-
T Consensus 95 A~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG-~v 170 (513)
T 1u6z_A 95 ALNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMG-CV 170 (513)
T ss_dssp CTTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCC-HH
T ss_pred CcCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEecc-HH
Confidence 355677777788888875 33333 23333332 11 2269999999999999988888765 45789999 76
Q ss_pred HHHHHH
Q psy9135 893 SVESHI 898 (1107)
Q Consensus 893 ~lt~~L 898 (1107)
.+++.+
T Consensus 171 rlte~f 176 (513)
T 1u6z_A 171 SFAQLY 176 (513)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 61
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=83.99 E-value=0.42 Score=51.86 Aligned_cols=66 Identities=18% Similarity=0.259 Sum_probs=46.7
Q ss_pred CHHHHHHHHHhccCccchhhhhccEEEEcCCCCccChHHHHHHHHHhhcCCCCccccccceeEEEEcCCCCCccccchhH
Q psy9135 455 NIATIILDSLLKTGRDMKKPLAENILLTGGTAMTPGLKYRLLQELRTLIESPPYKDKLFIKNFKFHEFPAKENYVAWLGG 534 (1107)
Q Consensus 455 gL~e~I~~sI~~~~~d~r~~L~~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~aW~Gg 534 (1107)
++.+.|.+.+... -.|....++|+|+||.+..|+++++|++++. .+++.++ +|.+..=+||
T Consensus 188 ~~~~~v~~~l~~~--~~~~~~~~~vvl~GGva~n~~lr~~l~~~~g----------------~~~~~p~-~p~~~~A~GA 248 (276)
T 4ehu_A 188 GIHTSVAKRVSSL--VKRIGVQRNVVMVGGVARNSGIVRAMAREIN----------------TEIIVPD-IPQLTGALGA 248 (276)
T ss_dssp HHHHHHHHHHHHH--HHHHCCCSSEEEESGGGGCHHHHHHHHHHHT----------------SCEECCS-SGGGHHHHHH
T ss_pred HHHHHHHHHHHHH--HHhcccCCeEEEecCccchHHHHHHHHHHHC----------------CCeeeCC-CcchHHHHHH
Confidence 5666666655432 2344455789999999999999999987762 1234444 7888877999
Q ss_pred HhhcC
Q psy9135 535 AIFAA 539 (1107)
Q Consensus 535 silas 539 (1107)
+++|.
T Consensus 249 Al~A~ 253 (276)
T 4ehu_A 249 ALYAF 253 (276)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99984
No 62
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=82.56 E-value=9.1 Score=43.00 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=27.5
Q ss_pred ceEEEEEeCCCceEEEEeec--CEecccceEEecccHH
Q psy9135 162 NTGLVLDIGYSEATLLPVYE--GVPVLCAWKDLSLGGQ 197 (1107)
Q Consensus 162 ~tglVVDiG~~~T~V~PV~d--G~vl~~~~~~~~iGG~ 197 (1107)
.+.+|+|+|..+|.++-..+ +.+.......+++||.
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 47999999999999997754 3444444678888883
No 63
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=76.73 E-value=10 Score=44.02 Aligned_cols=107 Identities=12% Similarity=0.036 Sum_probs=56.9
Q ss_pred hhHHHHHHHHHHHHHhhccccCCCCCeEEEEecCCCcH------HHHHHHHHHHHhhc---Cc--ceEEEecc---hhhh
Q psy9135 90 DDLYGLLIEFIRKIFFKYFVTSPKDKRIVVVESVLTPT------VWRNTLAKVLFKHY---EV--LSLLYVPS---HLVS 155 (1107)
Q Consensus 90 ~~~~~~le~i~~~~~~~~L~~~~~~~~vllte~~~~~~------~~re~l~eilFE~~---~v--psv~~~~~---~lls 155 (1107)
....+.+..+++.+-...-.-..+..||.+.-..-... ..++.+.+-+-+.+ +| ..+.++.. ++.+
T Consensus 85 ~~~~~~l~~Ll~~a~~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~ 164 (452)
T 3zx3_A 85 DEIAAYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYG 164 (452)
T ss_dssp GGHHHHHHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhh
Confidence 33446677777776522111112567777665432211 13344444443333 33 45666543 3333
Q ss_pred hcc----CC------CceEEEEEeCCCceEEEEeecCEe--cccceEEecccH
Q psy9135 156 LCT----LG------VNTGLVLDIGYSEATLLPVYEGVP--VLCAWKDLSLGG 196 (1107)
Q Consensus 156 ~y~----~g------~~tglVVDiG~~~T~V~PV~dG~v--l~~~~~~~~iGG 196 (1107)
..+ .| ..+..|||+|..+|.|+-..++.. -.....++.++|
T Consensus 165 wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~~~~~~~~~~~l~l~g 217 (452)
T 3zx3_A 165 WITINYLLGRFKTPGGSTFGALDLGGASTQITFVPLNSTLEAPETSLQFRLYG 217 (452)
T ss_dssp HHHHHHHTTTTC---CCCCEEEEECSSEEEEEECCSSCCSSSGGGEEEEEETT
T ss_pred HHHHHhhhccccCCCCCceEEEecCCCceEEEeccCCCccCCCCceEEEEECC
Confidence 322 34 256778999999999998777652 223345555555
No 64
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=74.35 E-value=2.1 Score=47.44 Aligned_cols=26 Identities=23% Similarity=0.524 Sum_probs=24.1
Q ss_pred ceEEEEEeCCCceEEEEeecCEeccc
Q psy9135 162 NTGLVLDIGYSEATLLPVYEGVPVLC 187 (1107)
Q Consensus 162 ~tglVVDiG~~~T~V~PV~dG~vl~~ 187 (1107)
.++++||||..+|.|+|+.+|.++..
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~g 152 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVAE 152 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECCC
T ss_pred CCEEEEEcCcchhhhhhhcCCeeccc
Confidence 57999999999999999999999863
No 65
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=73.12 E-value=6.1 Score=46.43 Aligned_cols=74 Identities=18% Similarity=0.091 Sum_probs=55.5
Q ss_pred ccchhhhccc----CCc-eEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccc
Q psy9135 844 PSHLVSLCTL----GVN-TGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVT 918 (1107)
Q Consensus 844 ~~~~lalya~----g~~-tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~ 918 (1107)
-++.+|.+++ ++. -.++||+|.++|.+.-+.+|..+ ....+++| |+++|..+..-|.-..
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~g-G~~VT~DIA~~Lgt~d------------ 454 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGA-GDMVTMIIARELGLED------------ 454 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECS-HHHHHHHHHHHHTCCC------------
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccc-hHHHHHHHHHHhCCCC------------
Confidence 4566666664 232 46789999999999999999766 45678999 9999999988884221
Q ss_pred hhhhhcccHHHHHHHHHhceeec
Q psy9135 919 VEDVENLSDSIIEDIKVCSCFVT 941 (1107)
Q Consensus 919 ~~~~~~l~~~~v~~iKe~~c~v~ 941 (1107)
.+.+|+||. +....
T Consensus 455 --------~~~AErIK~-YG~A~ 468 (610)
T 2d0o_A 455 --------RYLAEEIKK-YPLAK 468 (610)
T ss_dssp --------HHHHHHHHH-SCEEE
T ss_pred --------HHHHHHhcc-cCcee
Confidence 348999999 55444
No 66
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=72.10 E-value=6.4 Score=46.38 Aligned_cols=74 Identities=20% Similarity=0.112 Sum_probs=55.4
Q ss_pred ccchhhhccc----CCc-eEEEEEcCCCceEEEEEEcCEeeccceEEEeccchHHHHHHHHHHHHhhcccCCCCCCCccc
Q psy9135 844 PSHLVSLCTL----GVN-TGLVLDIGYSEATLLPVYEGVPVLCAWKDLSLGGGQSVESHIRSLLIDEIKALENPDPYIVT 918 (1107)
Q Consensus 844 ~~~~lalya~----g~~-tglVVDiG~~~T~v~PV~dG~~l~~~~~~~~~G~G~~lt~~L~~lL~~~~~~~~~~~~~~~~ 918 (1107)
-++.+|.+++ ++. -.++||+|.++|.+.-+.+|..+ ....+++| |+++|..+..-|.-..
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~g-G~~VT~DIA~~Lg~~d------------ 456 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGA-GNMVSLLIKTELGLED------------ 456 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECC-HHHHHHHHHHHHTCSC------------
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccc-hHHHHHHHHHHhCCCC------------
Confidence 4566666664 232 46789999999999999999766 45678999 9999999988884321
Q ss_pred hhhhhcccHHHHHHHHHhceeec
Q psy9135 919 VEDVENLSDSIIEDIKVCSCFVT 941 (1107)
Q Consensus 919 ~~~~~~l~~~~v~~iKe~~c~v~ 941 (1107)
.+.+|+||. +....
T Consensus 457 --------~~~AErIK~-YG~A~ 470 (607)
T 1nbw_A 457 --------LSLAEAIKK-YPLAK 470 (607)
T ss_dssp --------HHHHHHHHH-SCEEE
T ss_pred --------HHHHHHhcc-cCcee
Confidence 348999999 55444
No 67
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=70.16 E-value=5.6 Score=44.73 Aligned_cols=34 Identities=12% Similarity=0.038 Sum_probs=24.5
Q ss_pred ceEEEEEcCCCceEEEEEEc--CEeeccceEEEecc
Q psy9135 856 NTGLVLDIGYSEATLLPVYE--GVPVLCAWKDLSLG 889 (1107)
Q Consensus 856 ~tglVVDiG~~~T~v~PV~d--G~~l~~~~~~~~~G 889 (1107)
.|.+|+|+|.++|+++=..+ +.+.......+++|
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG 175 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIY 175 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEET
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEEC
Confidence 47999999999999987644 33433335667766
No 68
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=67.32 E-value=26 Score=37.60 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=12.5
Q ss_pred CCceEEEEEeCCCce
Q psy9135 160 GVNTGLVLDIGYSEA 174 (1107)
Q Consensus 160 g~~tglVVDiG~~~T 174 (1107)
+...++|||+|...|
T Consensus 123 ~~~~~iVVD~GTA~T 137 (266)
T 3djc_A 123 PNQNIIVIDFGTATT 137 (266)
T ss_dssp TTSEEEEEEESSEEE
T ss_pred CCCCEEEEECCCeeE
Confidence 346899999998887
No 69
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=66.67 E-value=3.5 Score=45.63 Aligned_cols=25 Identities=24% Similarity=0.585 Sum_probs=23.4
Q ss_pred ceEEEEEcCCCceEEEEEEcCEeec
Q psy9135 856 NTGLVLDIGYSEATLLPVYEGVPVL 880 (1107)
Q Consensus 856 ~tglVVDiG~~~T~v~PV~dG~~l~ 880 (1107)
.++|+||||.++|.++||.+|.|+.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999975
No 70
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=66.56 E-value=21 Score=38.38 Aligned_cols=17 Identities=12% Similarity=0.292 Sum_probs=13.3
Q ss_pred ceEEEEEeCCCceEEEEe
Q psy9135 162 NTGLVLDIGYSEATLLPV 179 (1107)
Q Consensus 162 ~tglVVDiG~~~T~V~PV 179 (1107)
..++|||+|...| +..|
T Consensus 123 ~~~iVVD~GTAtT-~d~v 139 (268)
T 2h3g_X 123 SPLIIVDFGTATT-YCYI 139 (268)
T ss_dssp SSEEEEEESSEEE-EEEE
T ss_pred CCEEEEECCCceE-EEEE
Confidence 5899999998887 4444
No 71
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=65.92 E-value=27 Score=37.45 Aligned_cols=18 Identities=33% Similarity=0.580 Sum_probs=15.4
Q ss_pred EEEecCcceEEEeccCCC
Q psy9135 739 VVLDIGSKYTKYGIFGSF 756 (1107)
Q Consensus 739 vViD~Gs~~iK~G~age~ 756 (1107)
++||+|..+||.|+-.++
T Consensus 3 L~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEECSSEEEEEEEETT
T ss_pred EEEEECcCcEEEEEEECC
Confidence 789999999999987543
No 72
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=65.85 E-value=24 Score=37.78 Aligned_cols=19 Identities=21% Similarity=0.340 Sum_probs=16.2
Q ss_pred eEEEecCcceEEEeccCCC
Q psy9135 738 GVVLDIGSKYTKYGIFGSF 756 (1107)
Q Consensus 738 ~vViD~Gs~~iK~G~age~ 756 (1107)
-++||+|..+||.|+-.++
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 5899999999999987554
No 73
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=63.68 E-value=22 Score=41.25 Aligned_cols=36 Identities=17% Similarity=-0.021 Sum_probs=25.4
Q ss_pred CceEEEEEeCCCceEEEEeecCEe-cccceEEecccH
Q psy9135 161 VNTGLVLDIGYSEATLLPVYEGVP-VLCAWKDLSLGG 196 (1107)
Q Consensus 161 ~~tglVVDiG~~~T~V~PV~dG~v-l~~~~~~~~iGG 196 (1107)
..+..|+|+|..+|.|+-+.+... -+.....+.++|
T Consensus 189 ~~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g 225 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYG 225 (456)
T ss_dssp CCCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETT
T ss_pred CCceEEEEcCCCceEEEeccCCccCCCCceEEEEeCC
Confidence 356899999999999998877653 223445555555
No 74
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=58.76 E-value=56 Score=34.52 Aligned_cols=19 Identities=16% Similarity=0.286 Sum_probs=15.9
Q ss_pred eEEEecCcceEEEeccCCC
Q psy9135 738 GVVLDIGSKYTKYGIFGSF 756 (1107)
Q Consensus 738 ~vViD~Gs~~iK~G~age~ 756 (1107)
-++||+|..++|.|+-.++
T Consensus 5 ~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEECSSEEEEEEESSS
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 4789999999999986543
No 75
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=56.36 E-value=6.3 Score=42.91 Aligned_cols=71 Identities=10% Similarity=0.027 Sum_probs=47.3
Q ss_pred CHHHHHHHHHhccCc-cchhhhhccEEEEcC-CCCccChHHHHHHHHHhhcCCCCccccccceeEEEEcCCCCCccccch
Q psy9135 455 NIATIILDSLLKTGR-DMKKPLAENILLTGG-TAMTPGLKYRLLQELRTLIESPPYKDKLFIKNFKFHEFPAKENYVAWL 532 (1107)
Q Consensus 455 gL~e~I~~sI~~~~~-d~r~~L~~nIvLtGG-~S~ipGf~eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~aW~ 532 (1107)
||..+|.+.|..+-. -.|+.=.++|+++|| .+..|++.++|.+.+... ..+++-++ +++|..=+
T Consensus 215 sl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-------------~~~~~~p~-~~~~~gAl 280 (287)
T 2ews_A 215 AVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVLR-------------GCKPYYVE-NGAFSGAI 280 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHT-------------TCEEEECT-TGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhC-------------CceEEECC-CccHHHHH
Confidence 566666666533211 012222347999999 999999999999876442 23444444 78999999
Q ss_pred hHHhhcC
Q psy9135 533 GGAIFAA 539 (1107)
Q Consensus 533 Ggsilas 539 (1107)
||.++++
T Consensus 281 GAaL~~~ 287 (287)
T 2ews_A 281 GALYLEK 287 (287)
T ss_dssp HHHHTCC
T ss_pred HHHHhCC
Confidence 9998763
No 76
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=48.88 E-value=1.8e+02 Score=31.25 Aligned_cols=89 Identities=12% Similarity=0.120 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHHHHhhccccCCCC---CeEEEEecCCCcHHHHHHHHHHHHhhc--CcceEEEecchhhhhcc-CCCce
Q psy9135 90 DDLYGLLIEFIRKIFFKYFVTSPKD---KRIVVVESVLTPTVWRNTLAKVLFKHY--EVLSLLYVPSHLVSLCT-LGVNT 163 (1107)
Q Consensus 90 ~~~~~~le~i~~~~~~~~L~~~~~~---~~vllte~~~~~~~~re~l~eilFE~~--~vpsv~~~~~~lls~y~-~g~~t 163 (1107)
...|+.+.+.++.++. ..+.++.+ ..+-+..|-......... |=+.+ ++| +++.+++-+++++ .+..+
T Consensus 50 ~~~~~~l~~~i~~~l~-~~~~~~~~i~~~~igig~pG~v~~~~~~~----l~~~~~~~~p-v~v~NDa~aaa~ge~~~~~ 123 (305)
T 1zc6_A 50 AKSWQAVLSTLEAAFQ-QAGLPAAPASACAIGLGLSGVHNRQWAGE----FESQAPGFAR-LSLATDGYTTLLGAHGGQP 123 (305)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCCCCGGGEEEEEEESCCCTTSHHHH----HHHTCCCCSE-EEEECHHHHHHHHHTTTSS
T ss_pred HHHHHHHHHHHHHHHH-hcCCChhhhccceEEEEecCCCchHHHHH----HHHhCCCCce-EEEECCHHHHHHhhcCCCC
Confidence 4456777777777663 33444433 236666665443332222 33344 444 8999999999888 45678
Q ss_pred EEEEEeCCCceEEEEee-cCEec
Q psy9135 164 GLVLDIGYSEATLLPVY-EGVPV 185 (1107)
Q Consensus 164 glVVDiG~~~T~V~PV~-dG~vl 185 (1107)
+++|-+|.... ..-+. +|...
T Consensus 124 ~v~v~~GTGig-g~~i~~~G~~~ 145 (305)
T 1zc6_A 124 GIIVALGTGSI-GEALYPDGSHR 145 (305)
T ss_dssp EEEEEESSSEE-EEEECTTSCEE
T ss_pred eEEEEecCCeE-EEEEeCCCcEE
Confidence 89999998864 23344 78753
No 77
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=46.51 E-value=70 Score=34.72 Aligned_cols=53 Identities=8% Similarity=-0.074 Sum_probs=39.5
Q ss_pred HHHHHHhhcCcceEEEecchhhhhcc-------CCCceEEEEEeCCCceEEEEeecCEeccc
Q psy9135 133 LAKVLFKHYEVLSLLYVPSHLVSLCT-------LGVNTGLVLDIGYSEATLLPVYEGVPVLC 187 (1107)
Q Consensus 133 l~eilFE~~~vpsv~~~~~~lls~y~-------~g~~tglVVDiG~~~T~V~PV~dG~vl~~ 187 (1107)
+.+.|=+.|++| +++.+++-+++++ .+..+.++|-+|.. .-..-|.+|.+...
T Consensus 100 l~~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 100 VKEQIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEeec
Confidence 344444567888 8889999988765 24578999999988 55677789988754
No 78
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=46.26 E-value=71 Score=34.68 Aligned_cols=129 Identities=15% Similarity=0.094 Sum_probs=71.1
Q ss_pred ceEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhccccCCC---------
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVTSPK--------- 807 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~~~~--------- 807 (1107)
..+.||+|...+|++...... +.+....+..+. ..+....++.+.+.++.++.+ .+.++.
T Consensus 7 ~~lgiDiggt~~~~~l~d~~g-~il~~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~-~~~~~~~i~~igi~~ 75 (326)
T 2qm1_A 7 KIIGIDLGGTTIKFAILTTDG-VVQQKWSIETNI---------LEDGKHIVPSIIESIRHRIDL-YNMKKEDFVGIGMGT 75 (326)
T ss_dssp EEEEEEECSSEEEEEEEETTC-CEEEEEEEECCC---------TTTTTTHHHHHHHHHHHHHHH-TTCCGGGEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCC-CEEEEEEEcCCC---------CCCHHHHHHHHHHHHHHHHHH-cCCCccceeEEEEec
Confidence 568999999999999864332 111111111110 012223456666666666532 221111
Q ss_pred ------CceEEEEeccCCchHHH-H-HHHHHHhcccCcceeeecccchhhhcc-------cCCceEEEEEcCCCceEEEE
Q psy9135 808 ------DKRIVVVESVLTPTVWR-N-TLAKVLFKHYEVLSLLYVPSHLVSLCT-------LGVNTGLVLDIGYSEATLLP 872 (1107)
Q Consensus 808 ------~~~vll~e~~~~~~~~r-e-~l~eiLFE~~~vpsv~~~~~~~lalya-------~g~~tglVVDiG~~~T~v~P 872 (1107)
+..+++.-|.+ . ++ . .+.+.|=+.|++| +++.++.-+++++ .+..+.++|-+|.+ +-..-
T Consensus 76 pG~vd~~~g~v~~~~~l-~--w~~~~~l~~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~gi 150 (326)
T 2qm1_A 76 PGSVDIEKGTVVGAYNL-N--WTTVQPVKEQIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGI 150 (326)
T ss_dssp SSEEETTTTEEECBGGG-T--BCSCBCHHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEE
T ss_pred ccceeCCCCEEEecCCC-C--ccCCchHHHHHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEE
Confidence 11122211111 0 11 1 3344444556887 8889999888765 24578999999988 55666
Q ss_pred EEcCEeecc
Q psy9135 873 VYEGVPVLC 881 (1107)
Q Consensus 873 V~dG~~l~~ 881 (1107)
|.+|.++..
T Consensus 151 v~~G~l~~G 159 (326)
T 2qm1_A 151 VAAGKLLHG 159 (326)
T ss_dssp EETTEECCC
T ss_pred EECCEEeec
Confidence 779987753
No 79
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=41.15 E-value=1.5e+02 Score=31.52 Aligned_cols=69 Identities=12% Similarity=-0.018 Sum_probs=48.2
Q ss_pred eEEEEecCCCcHHHHHHHHHHHHhhcCc-ceEEEecchhhhhcc-CCCceEEEEEeCCCceEEEEeecCEec
Q psy9135 116 RIVVVESVLTPTVWRNTLAKVLFKHYEV-LSLLYVPSHLVSLCT-LGVNTGLVLDIGYSEATLLPVYEGVPV 185 (1107)
Q Consensus 116 ~vllte~~~~~~~~re~l~eilFE~~~v-psv~~~~~~lls~y~-~g~~tglVVDiG~~~T~V~PV~dG~vl 185 (1107)
.+-+.-|-.. +.....+.+.|=+.+++ ..+.+.+++.+++++ .+..++++|=+|...--..-+.||.+.
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 4666666554 22233566666677775 359999999999998 577888888888887544445688874
No 80
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=40.30 E-value=2e+02 Score=30.17 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=18.5
Q ss_pred CceEEEEEeCCCceEEEEeecCEeccc
Q psy9135 161 VNTGLVLDIGYSEATLLPVYEGVPVLC 187 (1107)
Q Consensus 161 ~~tglVVDiG~~~T~V~PV~dG~vl~~ 187 (1107)
...++|||+|...|--+- .+|.-+-.
T Consensus 121 ~~~~iVvD~GTA~T~d~v-~~g~~lGG 146 (249)
T 3bex_A 121 GKNGIIIDMGTATTVDLV-VNGSYEGG 146 (249)
T ss_dssp CSCEEEEEESSEEEEEEE-ETTEEEEE
T ss_pred CCCEEEEEcCCceEEEEE-eCCeEeeE
Confidence 368999999988775444 77665543
No 81
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=40.02 E-value=53 Score=37.97 Aligned_cols=22 Identities=23% Similarity=0.070 Sum_probs=17.8
Q ss_pred ceEEEEEcCCCceEEEEEEcCE
Q psy9135 856 NTGLVLDIGYSEATLLPVYEGV 877 (1107)
Q Consensus 856 ~tglVVDiG~~~T~v~PV~dG~ 877 (1107)
.|..|+|+|.++|+|+=..++.
T Consensus 181 ~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 181 STFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp CCCEEEEECSSEEEEEECCSSC
T ss_pred CceEEEecCCCceEEEeccCCC
Confidence 5667889999999998776553
No 82
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=37.32 E-value=8.4 Score=41.45 Aligned_cols=48 Identities=27% Similarity=0.468 Sum_probs=36.6
Q ss_pred hccEEEEcCCCCccChHHHHHHHHHhhcCCCCccccccceeEEEEcCCCCCccccchhHHhhcCC
Q psy9135 476 AENILLTGGTAMTPGLKYRLLQELRTLIESPPYKDKLFIKNFKFHEFPAKENYVAWLGGAIFAAT 540 (1107)
Q Consensus 476 ~~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~aW~Ggsilasl 540 (1107)
-+.|+++||.+..+++.+++.+.|.. + |..++ .+.+..=+||+++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------------~--v~~p~-~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV--------------E--IKTSP-LAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS--------------C--EECCG-GGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC--------------C--eEeCC-CcchHhHHHHHHHHHH
Confidence 36799999999999999999888732 2 23233 5777777899999854
No 83
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=36.22 E-value=1.3e+02 Score=31.74 Aligned_cols=61 Identities=13% Similarity=0.034 Sum_probs=36.3
Q ss_pred EEEecchhhhhccC---CCceEEEEEeCCCceEEEEee-cCEecccc-eEEecccHHHHHHHHHHh
Q psy9135 146 LLYVPSHLVSLCTL---GVNTGLVLDIGYSEATLLPVY-EGVPVLCA-WKDLSLGGQSVEAHIRRG 206 (1107)
Q Consensus 146 v~~~~~~lls~y~~---g~~tglVVDiG~~~T~V~PV~-dG~vl~~~-~~~~~iGG~~lt~~L~~l 206 (1107)
+..++...+.++++ ....-.|+|+|.+.++++-+. +|...... -....-|+.+..+.+.+.
T Consensus 74 ~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~ 139 (276)
T 4ehu_A 74 DKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKI 139 (276)
T ss_dssp SEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHH
Confidence 34556666666654 234557999999999988774 45433211 123455666666555555
No 84
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=35.45 E-value=19 Score=40.29 Aligned_cols=73 Identities=10% Similarity=0.060 Sum_probs=48.7
Q ss_pred CHHHHHHHHHhccC-ccchhhhhccEEEEcC-CCCccChHHHHHHHHHhhcCCCCccccccceeEEEEcCCCCCccccch
Q psy9135 455 NIATIILDSLLKTG-RDMKKPLAENILLTGG-TAMTPGLKYRLLQELRTLIESPPYKDKLFIKNFKFHEFPAKENYVAWL 532 (1107)
Q Consensus 455 gL~e~I~~sI~~~~-~d~r~~L~~nIvLtGG-~S~ipGf~eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~aW~ 532 (1107)
||..+|.+.|..+- .-.++.=.++|+++|| .+.-|++.+.|++.|.--.... .++-+ ++ +++|..=+
T Consensus 284 gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~--------~~~~~--~~-~~~y~GAl 352 (360)
T 2i7n_A 284 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQ--------LKALF--LE-HEGYFGAV 352 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTS--------CCEEE--ET-TTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCC--------eeEEE--cC-CccHHHHH
Confidence 67777777664432 1113333358999999 9999999999999986432221 13333 33 68999989
Q ss_pred hHHhhc
Q psy9135 533 GGAIFA 538 (1107)
Q Consensus 533 Ggsila 538 (1107)
||.+.+
T Consensus 353 GAaL~~ 358 (360)
T 2i7n_A 353 GALLEL 358 (360)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 85
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=34.23 E-value=2.4e+02 Score=30.17 Aligned_cols=127 Identities=12% Similarity=0.079 Sum_probs=72.6
Q ss_pred ceEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhccccCCCCc---eEEE
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVTSPKDK---RIVV 813 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~~~~~~---~vll 813 (1107)
..+.||+|+..+|++....+.- .+...... +. . ...+....|+.+.+.++.++. ..+.++++. .+-+
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~-il~~~~~~-~~-----~--~~~~~~~~~~~l~~~i~~~l~-~~~~~~~~i~~~~igi 81 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT-PLAMAEGG-AS-----A--LSQGIAKSWQAVLSTLEAAFQ-QAGLPAAPASACAIGL 81 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC-EEEEEEES-CC-----C--GGGCHHHHHHHHHHHHHHHHH-HTTCCCCCGGGEEEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC-EEEEEeCC-CC-----C--cccCHHHHHHHHHHHHHHHHH-hcCCChhhhccceEEE
Confidence 4689999999999998754321 11111000 00 0 001234456777777777663 334444442 4566
Q ss_pred EeccCCchHHHHHHHHHHhccc--Ccceeeecccchhhhccc-CCceEEEEEcCCCceEEEEEE-cCEee
Q psy9135 814 VESVLTPTVWRNTLAKVLFKHY--EVLSLLYVPSHLVSLCTL-GVNTGLVLDIGYSEATLLPVY-EGVPV 879 (1107)
Q Consensus 814 ~e~~~~~~~~re~l~eiLFE~~--~vpsv~~~~~~~lalya~-g~~tglVVDiG~~~T~v~PV~-dG~~l 879 (1107)
..|-...+..... |=+.| ++| +++.++.-+++++. +..++++|-+|.+.. ..-+. +|...
T Consensus 82 g~pG~v~~~~~~~----l~~~~~~~~p-v~v~NDa~aaa~ge~~~~~~v~v~~GTGig-g~~i~~~G~~~ 145 (305)
T 1zc6_A 82 GLSGVHNRQWAGE----FESQAPGFAR-LSLATDGYTTLLGAHGGQPGIIVALGTGSI-GEALYPDGSHR 145 (305)
T ss_dssp EESCCCTTSHHHH----HHHTCCCCSE-EEEECHHHHHHHHHTTTSSEEEEEESSSEE-EEEECTTSCEE
T ss_pred EecCCCchHHHHH----HHHhCCCCce-EEEECCHHHHHHhhcCCCCeEEEEecCCeE-EEEEeCCCcEE
Confidence 6665443332222 22234 444 88999999988874 567889998998763 33344 78643
No 86
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=33.13 E-value=66 Score=37.27 Aligned_cols=23 Identities=13% Similarity=-0.002 Sum_probs=19.0
Q ss_pred CceEEEEEcCCCceEEEEEEcCE
Q psy9135 855 VNTGLVLDIGYSEATLLPVYEGV 877 (1107)
Q Consensus 855 ~~tglVVDiG~~~T~v~PV~dG~ 877 (1107)
..+..|+|+|.++|+++-+-+..
T Consensus 189 ~~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCCEEEEECSSEEEEEEECCSC
T ss_pred CCceEEEEcCCCceEEEeccCCc
Confidence 35688999999999999876654
No 87
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=32.98 E-value=4.8e+02 Score=28.12 Aligned_cols=84 Identities=17% Similarity=0.054 Sum_probs=55.0
Q ss_pred hhHHHHHHHHHHHHHhhccccCCC--CCeEEEEecCCCcHHHHHHHHHHHHhhcC---cceEEEecchhhhhccCCCceE
Q psy9135 90 DDLYGLLIEFIRKIFFKYFVTSPK--DKRIVVVESVLTPTVWRNTLAKVLFKHYE---VLSLLYVPSHLVSLCTLGVNTG 164 (1107)
Q Consensus 90 ~~~~~~le~i~~~~~~~~L~~~~~--~~~vllte~~~~~~~~re~l~eilFE~~~---vpsv~~~~~~lls~y~~g~~tg 164 (1107)
...|+.+.+.++.++.+ .+.++. -.-+-+..|-.........+.+.|=+.|+ .| +.+.+++-+++++....++
T Consensus 46 ~~~~~~i~~~i~~~~~~-~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~ 123 (347)
T 2ch5_A 46 DKCVERINEMVNRAKRK-AGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGG 123 (347)
T ss_dssp HHHHHHHHHHHHHHHHH-HTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHHHHh-cCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCc
Confidence 44577777777776633 233332 24567777766555545566677767776 54 8889999888887534678
Q ss_pred EEEEeCCCceE
Q psy9135 165 LVLDIGYSEAT 175 (1107)
Q Consensus 165 lVVDiG~~~T~ 175 (1107)
++|-+|...--
T Consensus 124 v~v~~GTGig~ 134 (347)
T 2ch5_A 124 VVLISGTGSNC 134 (347)
T ss_dssp EEEEESSSEEE
T ss_pred EEEEEcCCcee
Confidence 88888876543
No 88
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=32.54 E-value=1.7e+02 Score=31.13 Aligned_cols=128 Identities=13% Similarity=0.011 Sum_probs=70.2
Q ss_pred eEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhccccCCCC-ceEEEEec
Q psy9135 738 GVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVTSPKD-KRIVVVES 816 (1107)
Q Consensus 738 ~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~~~~~-~~vll~e~ 816 (1107)
.+-||+|+..||++... +. +.+...... +.+. ...+.....+.+.+.++.. ++.+..+ ..+-+.-|
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g-~il~~~~~~-~~~~------~~~~~~~~~~~i~~~i~~~----~~~~~~~i~~igig~p 68 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EG-KSLGRFQTS-GINP------FQQDRNEIDTALRSEVLPA----IGQKASSIRAVYFYGA 68 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TT-EEEEEEEEE-CCCT------TTSCHHHHHHHHTTTTHHH----HTTSTTTCCEEEEEET
T ss_pred EEEEEeCccceEEEEEe-CC-eEEEEEECC-CCCc------ccCCHHHHHHHHHHHHHHH----hCCCcccccEEEEECC
Confidence 47899999999999875 32 211111110 1000 0001111222333333322 2222222 23556666
Q ss_pred cCCchHHHHHHHHHHhcccCc-ceeeecccchhhhcc-cCCceEEEEEcCCCceEEEEEEcCEee
Q psy9135 817 VLTPTVWRNTLAKVLFKHYEV-LSLLYVPSHLVSLCT-LGVNTGLVLDIGYSEATLLPVYEGVPV 879 (1107)
Q Consensus 817 ~~~~~~~re~l~eiLFE~~~v-psv~~~~~~~lalya-~g~~tglVVDiG~~~T~v~PV~dG~~l 879 (1107)
-.. +.....+.+.|=+.+++ ..+.+.+++.+++++ .|..++++|=+|.+.--..-+.||...
T Consensus 69 G~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 69 GCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp TCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred CCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 544 22233566666566775 358999999999998 577889988888877434444688774
No 89
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=32.53 E-value=1.3e+02 Score=32.25 Aligned_cols=17 Identities=24% Similarity=0.386 Sum_probs=15.1
Q ss_pred eEEEecCcceEEEeccC
Q psy9135 738 GVVLDIGSKYTKYGIFG 754 (1107)
Q Consensus 738 ~vViD~Gs~~iK~G~ag 754 (1107)
-++||+|..++|.|+..
T Consensus 25 ~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEEe
Confidence 48999999999999864
No 90
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=31.52 E-value=2.7e+02 Score=31.03 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=38.9
Q ss_pred HHHHHHHHhcccCcceeeecccch---------hhhc-----------------------ccCC--c--eEEEEEcCCCc
Q psy9135 824 RNTLAKVLFKHYEVLSLLYVPSHL---------VSLC-----------------------TLGV--N--TGLVLDIGYSE 867 (1107)
Q Consensus 824 re~l~eiLFE~~~vpsv~~~~~~~---------laly-----------------------a~g~--~--tglVVDiG~~~ 867 (1107)
.-.+.+.|-+.+++|- ++.+++. ++++ +.|+ . +.+++-+|.+.
T Consensus 109 ~~~l~~~l~~~~~~Pv-~v~NDan~~~~~~~a~aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGi 187 (381)
T 1saz_A 109 GAIIAHRFSSETGVPA-YVVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGI 187 (381)
T ss_dssp HHHHHHHHHHHHCCCE-EEESCTTBCCCCGGGTBCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSE
T ss_pred hHHHHHHHHHhcCCCE-EEeCCCccccCcHHHHHcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCc
Confidence 3456666778889995 4777765 4433 3333 4 89999999866
Q ss_pred eEEEEEEcCEeecc
Q psy9135 868 ATLLPVYEGVPVLC 881 (1107)
Q Consensus 868 T~v~PV~dG~~l~~ 881 (1107)
.+.-|.+|.++..
T Consensus 188 -G~g~i~~G~~~~G 200 (381)
T 1saz_A 188 -SIAAHRKGRVIDV 200 (381)
T ss_dssp -EEEEEETTEEEEE
T ss_pred -EEEEEECCEEEEe
Confidence 6778889987744
No 91
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=29.79 E-value=1.8e+02 Score=31.42 Aligned_cols=125 Identities=8% Similarity=0.006 Sum_probs=72.3
Q ss_pred ceEEEecCcceEEEeccCCC---CccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhc--cc--------
Q psy9135 737 TGVVLDIGSKYTKYGIFGSF---QPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKY--FV-------- 803 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~---~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~--L~-------- 803 (1107)
-.+.||+|...+|++....+ .-+..+|+ + .+....++.+.+.++.+..+. ..
T Consensus 3 ~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~----~-----------~~~~~~~~~i~~~i~~~~~~~~i~gigi~~pG~ 67 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDEEGRILSTFKVAT----P-----------PTAEGIVDAICAAVAGASEGHDVEAVGIGAAGY 67 (321)
T ss_dssp EEEEEEECSSEEEEEEECTTCCBCCCEEEEC----C-----------SSHHHHHHHHHHHHHHHHTTCCEEEEEEEESSE
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEeeC----C-----------CCHHHHHHHHHHHHHHHHhhcCceEEEEecccc
Confidence 46899999999999987432 23333333 1 123334555666666554221 01
Q ss_pred cCCCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcc-------cCCceEEEEEcCCCceEEEEEEcC
Q psy9135 804 TSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCT-------LGVNTGLVLDIGYSEATLLPVYEG 876 (1107)
Q Consensus 804 ~~~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya-------~g~~tglVVDiG~~~T~v~PV~dG 876 (1107)
+++ +..++..-|.+ .- ....+.+.|=+.|++| +++.++.-+++++ .+..+.++|-+|.+ .-..-|.+|
T Consensus 68 vd~-~~g~v~~~~~l-~w-~~~~l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G 142 (321)
T 3vgl_A 68 VDD-KRATVLFAPNI-DW-RHEPLKDKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGN 142 (321)
T ss_dssp ECT-TSSCEEECSSS-CC-EEECHHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETT
T ss_pred EeC-CCCEEEeCCCC-CC-cCCCHHHHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECC
Confidence 111 12222222222 10 0112344455567888 8899999888775 24578999999987 566677899
Q ss_pred Eeecc
Q psy9135 877 VPVLC 881 (1107)
Q Consensus 877 ~~l~~ 881 (1107)
.++..
T Consensus 143 ~l~~G 147 (321)
T 3vgl_A 143 KLRRG 147 (321)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 88754
No 92
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=27.38 E-value=58 Score=35.14 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=46.7
Q ss_pred HHHHHHHHHhccCccchhhhhccEEEEcCCCCccChHHHHHHHHHhhcCCCCccccccceeEEEEcCCCCCccccchhHH
Q psy9135 456 IATIILDSLLKTGRDMKKPLAENILLTGGTAMTPGLKYRLLQELRTLIESPPYKDKLFIKNFKFHEFPAKENYVAWLGGA 535 (1107)
Q Consensus 456 L~e~I~~sI~~~~~d~r~~L~~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~aW~Ggs 535 (1107)
|...|.+.+..++++ .|+|.||.+..+.|.+++++.+...... .++|..+. -...+.-+||.
T Consensus 225 La~~i~~l~~~~~p~-------~IvlgGgi~~~~~~~~~l~~~l~~~~~~----------~~~i~~s~-lg~~a~~~GAa 286 (297)
T 4htl_A 225 ICTGLYNLIYLFDPT-------HIFIGGGITSRPTFIAELKHHMESFGLR----------DTIIETAT-HKNQAGLLGAV 286 (297)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGSTTHHHHHHHHHTTTCCT----------TCEEEECS-CTTTHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCcccccHHHHHHHHHHHHHhccC----------CCeEEECC-cCChHHHHhHH
Confidence 777788877777774 4999999998888999999888754332 23343333 34567778988
Q ss_pred hhcC
Q psy9135 536 IFAA 539 (1107)
Q Consensus 536 ilas 539 (1107)
.++-
T Consensus 287 ~l~~ 290 (297)
T 4htl_A 287 YHFL 290 (297)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 93
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=26.07 E-value=2.4e+02 Score=30.40 Aligned_cols=53 Identities=6% Similarity=-0.074 Sum_probs=40.2
Q ss_pred HHHHHHhhcCcceEEEecchhhhhcc-------CCCceEEEEEeCCCceEEEEeecCEeccc
Q psy9135 133 LAKVLFKHYEVLSLLYVPSHLVSLCT-------LGVNTGLVLDIGYSEATLLPVYEGVPVLC 187 (1107)
Q Consensus 133 l~eilFE~~~vpsv~~~~~~lls~y~-------~g~~tglVVDiG~~~T~V~PV~dG~vl~~ 187 (1107)
+.+.|=+.|++| +++.+++-+++++ .+..+.++|-+|.. .-..-|.||.++..
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 147 (321)
T 3vgl_A 88 LKDKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRRG 147 (321)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEecC
Confidence 344555667888 8899999888775 24578999999987 56667889998764
No 94
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=25.55 E-value=2e+02 Score=31.41 Aligned_cols=126 Identities=12% Similarity=0.082 Sum_probs=69.5
Q ss_pred ceEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhc-------c--c----
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKY-------F--V---- 803 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~-------L--~---- 803 (1107)
..+.||+|...+|++....+. +.+.......+ .+....|+.+.+.++.++.+. . +
T Consensus 31 ~~lgiDiGgt~i~~~l~d~~G-~il~~~~~~~~-----------~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~p 98 (343)
T 2yhw_A 31 SALAVDLGGTNLRVAIVSMKG-EIVKKYTQFNP-----------KTYEERINLILQMCVEAAAEAVKLNCRILGVGISTG 98 (343)
T ss_dssp EEEEEEECSSEEEEEEEETTS-CEEEEEEEECC-----------SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEES
T ss_pred EEEEEEECCCEEEEEEECCCC-cEEEEEEEcCC-----------CCHHHHHHHHHHHHHHHHHhcccccCceEEEEEecc
Confidence 468999999999999865432 11111101000 123334566666665554321 0 1
Q ss_pred --cCCCCceEEEEecc----CCchHHHHHHHHHHhcccCcceeeecccchhhhcc-----c--CCceEEEEEcCCCceEE
Q psy9135 804 --TSPKDKRIVVVESV----LTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCT-----L--GVNTGLVLDIGYSEATL 870 (1107)
Q Consensus 804 --~~~~~~~vll~e~~----~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya-----~--g~~tglVVDiG~~~T~v 870 (1107)
++++ ..+++.-+. +.....++ .|=+.|++| +++.+++-+++++ . +..+.++|-+|.+ .-.
T Consensus 99 G~vd~~-~g~v~~~~~~~~~w~~~~l~~----~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~ 171 (343)
T 2yhw_A 99 GRVNPR-EGIVLHSTKLIQEWNSVDLRT----PLSDTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGG 171 (343)
T ss_dssp SEEETT-TTEEEECCTTSSSCSSEECHH----HHHHHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEE
T ss_pred cCEeCC-CCEEEeCCcCCCCCcCCCHHH----HHHHHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEE
Confidence 1111 223332222 22222233 333456787 8888998888765 2 4568999999987 456
Q ss_pred EEEEcCEeecc
Q psy9135 871 LPVYEGVPVLC 881 (1107)
Q Consensus 871 ~PV~dG~~l~~ 881 (1107)
.-|.+|.++..
T Consensus 172 gii~~G~l~~G 182 (343)
T 2yhw_A 172 GIIHQHELIHG 182 (343)
T ss_dssp EEEETTEECCC
T ss_pred EEEECCEEecC
Confidence 66779987653
No 95
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=25.29 E-value=60 Score=35.58 Aligned_cols=69 Identities=13% Similarity=0.053 Sum_probs=47.0
Q ss_pred HHHHHHHHHhccCccchhhhhccEEEEcCCCCccChHHHHHHHHHhhcCCCCccccccceeEEEEcCCCCCccccchhHH
Q psy9135 456 IATIILDSLLKTGRDMKKPLAENILLTGGTAMTPGLKYRLLQELRTLIESPPYKDKLFIKNFKFHEFPAKENYVAWLGGA 535 (1107)
Q Consensus 456 L~e~I~~sI~~~~~d~r~~L~~nIvLtGG~S~ipGf~eRL~~EL~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~aW~Ggs 535 (1107)
|...|.+.+..++++ .|+|.||.+..+-|.+++++++.+..... ...++|..+. -...++-+||.
T Consensus 257 La~~i~~l~~~l~p~-------~IvlgGgi~~~~~l~~~l~~~l~~~~~~~-------~~~~~i~~s~-lg~~a~~~GAa 321 (327)
T 4db3_A 257 LAICFGNIFTANDPH-------VVALGGGLSNFELIYEEMPKRVPKYLLSV-------AKCPKIIKAK-HGDSGGVRGAA 321 (327)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGCTHHHHHHHHHGGGGSCTT-------CCCCEEEECS-CGGGHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCcccchHHHHHHHHHHHHHHhccc-------cCCCEEEECC-CCCcHHHHHHH
Confidence 777787777777764 58999998888778888888887765431 1234454433 34556668888
Q ss_pred hhcC
Q psy9135 536 IFAA 539 (1107)
Q Consensus 536 ilas 539 (1107)
.++-
T Consensus 322 ~l~l 325 (327)
T 4db3_A 322 FLNI 325 (327)
T ss_dssp HTTC
T ss_pred HHHh
Confidence 7753
No 96
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=24.89 E-value=2.6e+02 Score=29.52 Aligned_cols=24 Identities=29% Similarity=0.432 Sum_probs=20.5
Q ss_pred ceEEEEEcCCCceEEEEEEcCEee
Q psy9135 856 NTGLVLDIGYSEATLLPVYEGVPV 879 (1107)
Q Consensus 856 ~tglVVDiG~~~T~v~PV~dG~~l 879 (1107)
...+|||+|.+.|.++-+-+|.+.
T Consensus 96 ~~~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 96 NVHTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp TCCEEEEEETTEEEEEEEETTEEE
T ss_pred CCCEEEEECCCceEEEEEeCCcee
Confidence 345799999999999999999765
No 97
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=23.94 E-value=2.3e+02 Score=30.80 Aligned_cols=51 Identities=8% Similarity=-0.106 Sum_probs=37.6
Q ss_pred HHHHhhcCcceEEEecchhhhhcc-----C--CCceEEEEEeCCCceEEEEeecCEeccc
Q psy9135 135 KVLFKHYEVLSLLYVPSHLVSLCT-----L--GVNTGLVLDIGYSEATLLPVYEGVPVLC 187 (1107)
Q Consensus 135 eilFE~~~vpsv~~~~~~lls~y~-----~--g~~tglVVDiG~~~T~V~PV~dG~vl~~ 187 (1107)
+.|=+.|++| +++.+++-+++++ . +..+.++|-+|.. .-..-|.+|.+...
T Consensus 125 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~G 182 (343)
T 2yhw_A 125 TPLSDTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIHG 182 (343)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEecC
Confidence 3444556888 8889998888765 2 4578999999987 45667789988754
No 98
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=23.90 E-value=4.3e+02 Score=29.19 Aligned_cols=130 Identities=8% Similarity=0.021 Sum_probs=70.5
Q ss_pred ceEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhccccCCC---------
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVTSPK--------- 807 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~~~~--------- 807 (1107)
..+.||+|...+|++...... +.+....+..+. ..+....++.+.+.++.++.+ .+.++.
T Consensus 88 ~~lGIDiGgt~i~~~l~d~~G-~vl~~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~-~~~~~~~i~gigi~~ 156 (380)
T 2hoe_A 88 YVLGIEVTRDEIAACLIDASM-NILAHEAHPLPS---------QSDREETLNVMYRIIDRAKDM-MEKLGSKLSALTVAA 156 (380)
T ss_dssp EEEEEEECSSEEEEEEEETTC-CEEEEEEEECCS---------SCCHHHHHHHHHHHHHHHHHH-HHHTTCCCCEEEEEE
T ss_pred eEEEEEECCCEEEEEEECCCC-CEEEEEEEccCC---------CCCHHHHHHHHHHHHHHHHHh-cCCCcCcEEEEEEEe
Confidence 468999999999999864332 111111111010 012334466666666665532 111111
Q ss_pred ------CceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcc-----cCCceEEEEEcCCCceEEEEEEcC
Q psy9135 808 ------DKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCT-----LGVNTGLVLDIGYSEATLLPVYEG 876 (1107)
Q Consensus 808 ------~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya-----~g~~tglVVDiG~~~T~v~PV~dG 876 (1107)
+...++.-|.+ . -....+.+.|=+.|++| +++.+++-+++++ .++.+.++|-+|.+. -..-|.+|
T Consensus 157 pG~vd~~~g~v~~~~~l-~-w~~~~l~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGi-G~giv~~G 232 (380)
T 2hoe_A 157 PGPIDTERGIIIDPRNF-P-LSQIPLANLLKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKGI-GAGIIIDG 232 (380)
T ss_dssp SSCEETTTTEECCCSSC-T-TBTSCHHHHHHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSC-EEEEEETT
T ss_pred eccEECCCCEEeccCCC-C-CcCCChHHHHHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCce-EEEEEECC
Confidence 11122211111 1 00013344454567887 8899999888765 334789999999874 56667799
Q ss_pred Eeecc
Q psy9135 877 VPVLC 881 (1107)
Q Consensus 877 ~~l~~ 881 (1107)
.++..
T Consensus 233 ~l~~G 237 (380)
T 2hoe_A 233 ELYRG 237 (380)
T ss_dssp EECCC
T ss_pred EEecc
Confidence 87654
No 99
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=22.57 E-value=4.9e+02 Score=27.69 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=38.5
Q ss_pred HHHHHHhhcCcceEEEecchhhhhcc-----C--CCceEEEEEeCCCceEEEEeecCEeccc
Q psy9135 133 LAKVLFKHYEVLSLLYVPSHLVSLCT-----L--GVNTGLVLDIGYSEATLLPVYEGVPVLC 187 (1107)
Q Consensus 133 l~eilFE~~~vpsv~~~~~~lls~y~-----~--g~~tglVVDiG~~~T~V~PV~dG~vl~~ 187 (1107)
+.+.|-+.|++| +++.+++-+++++ . +..+.++|-+|... -..-|.||.+...
T Consensus 90 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~~g~l~~G 149 (302)
T 3vov_A 90 IRRILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTGI-GGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EEEEEETTEECCC
T ss_pred hHHHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCce-eEEEEECCEEeeC
Confidence 344555677888 8889998888664 2 45789999999874 4555778888754
No 100
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=22.49 E-value=1.8e+02 Score=30.75 Aligned_cols=132 Identities=9% Similarity=0.022 Sum_probs=0.0
Q ss_pred eEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhccccCC------CCceE
Q psy9135 738 GVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVTSP------KDKRI 811 (1107)
Q Consensus 738 ~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~~~------~~~~v 811 (1107)
.+.||+|...+|++...... +.+.......+ ...+.....+.+.+.++....+...+-- ....-
T Consensus 3 ~lgidiggt~~~~~l~d~~g-~il~~~~~~~~---------~~~~~~~~~~~i~~~i~~~~~~~~~igi~~pG~vd~~~g 72 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGADG-QIRDRRELPTP---------ASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSL 72 (289)
T ss_dssp EEEEEECSSEEEEEEECTTC-CEEEEEEEECC---------SSCCHHHHHHHHHHHHTTTGGGCSEEEEEESSEEETTEE
T ss_pred EEEEEeCCCEEEEEEECCCC-CEEEEEEecCC---------CCCCHHHHHHHHHHHHHHHHhhCCEEEEEeccceeCCCC
Q ss_pred EEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcc-------cCCceEEEEEcCCCceEEEEEEcCEeeccc
Q psy9135 812 VVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCT-------LGVNTGLVLDIGYSEATLLPVYEGVPVLCA 882 (1107)
Q Consensus 812 ll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya-------~g~~tglVVDiG~~~T~v~PV~dG~~l~~~ 882 (1107)
.+..++..+.-....+.+.|=+.|++| +++.++.-+++++ .+. +.++|.+|.+ .-..-|.+|.++...
T Consensus 73 ~v~~~~~~~~w~~~~l~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~G~ 147 (289)
T 2aa4_A 73 LALNPHNLGGLLHFPLVKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLTGP 147 (289)
T ss_dssp ECSSGGGGGGGTTCCHHHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEECCT
T ss_pred EEEeCCCCCcccCCChHHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEeeCC
No 101
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=22.12 E-value=4.2e+02 Score=27.94 Aligned_cols=81 Identities=11% Similarity=0.004 Sum_probs=51.2
Q ss_pred hhHHHHHHHHHHHHHhhccccCCCCCeEEEEecCCCcHHHHHHHHHHHHhhcCcceEEEecchhhhhccC-CCceEEEEE
Q psy9135 90 DDLYGLLIEFIRKIFFKYFVTSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTL-GVNTGLVLD 168 (1107)
Q Consensus 90 ~~~~~~le~i~~~~~~~~L~~~~~~~~vllte~~~~~~~~re~l~eilFE~~~vpsv~~~~~~lls~y~~-g~~tglVVD 168 (1107)
...|+.+.+.++....+. -..+-+..|-..+......+.+.+=+ +++| +++.+++-+++++. ...+.++|-
T Consensus 42 ~~~~~~i~~~i~~~~~~~------~~~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~ 113 (299)
T 2e2o_A 42 TRAIENIKEAVKIAAKGE------ADVVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVI 113 (299)
T ss_dssp HHHHHHHHHHHHHHHTSC------CSEEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHhcC------CCEEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEE
Confidence 344566666666555321 12466666665444444455555545 7765 78888988888874 357889999
Q ss_pred eCCCceEEEEeecCE
Q psy9135 169 IGYSEATLLPVYEGV 183 (1107)
Q Consensus 169 iG~~~T~V~PV~dG~ 183 (1107)
+|... |.+|.
T Consensus 114 ~GTG~-----i~~g~ 123 (299)
T 2e2o_A 114 AGTGS-----VVEGY 123 (299)
T ss_dssp ESSSE-----EEEEE
T ss_pred ecCCE-----EEEEE
Confidence 99883 56676
No 102
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=22.10 E-value=4.5e+02 Score=27.70 Aligned_cols=119 Identities=13% Similarity=-0.006 Sum_probs=69.0
Q ss_pred eEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhccccCCCCceEEEEecc
Q psy9135 738 GVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVTSPKDKRIVVVESV 817 (1107)
Q Consensus 738 ~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~~~~~~~vll~e~~ 817 (1107)
.+.||+|...+|++....+. +.+.......+ .....+....|+.+.+.++.+..+. -..+-+..|-
T Consensus 4 ~lgiDiGgt~~~~~l~d~~g-~i~~~~~~~~~-------~~~~~~~~~~~~~i~~~i~~~~~~~------~~~igi~~~G 69 (299)
T 2e2o_A 4 IVGVDAGGTKTKAVAYDCEG-NFIGEGSSGPG-------NYHNVGLTRAIENIKEAVKIAAKGE------ADVVGMGVAG 69 (299)
T ss_dssp EEEEEECSSCEEEEEECTTS-CEEEEEEESCC-------CHHHHCHHHHHHHHHHHHHHHHTSC------CSEEEEEETT
T ss_pred EEEEEeCCCcEEEEEEcCCC-CEEEEEeCCCC-------CcccCCHHHHHHHHHHHHHHHHhcC------CCEEEEEcCC
Confidence 58999999999999875433 21111101000 0000122334556666666554321 1246666665
Q ss_pred CCchHHHHHHHHHHhcccCcceeeecccchhhhccc-CCceEEEEEcCCCceEEEEEEcCE
Q psy9135 818 LTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCTL-GVNTGLVLDIGYSEATLLPVYEGV 877 (1107)
Q Consensus 818 ~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya~-g~~tglVVDiG~~~T~v~PV~dG~ 877 (1107)
..+......+.+.+=+ +++| +++.++.-+++++. ...++++|-+|.+. |.+|.
T Consensus 70 ~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~~GTG~-----i~~g~ 123 (299)
T 2e2o_A 70 LDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVIAGTGS-----VVEGY 123 (299)
T ss_dssp CCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEEESSSE-----EEEEE
T ss_pred CCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEEecCCE-----EEEEE
Confidence 5333333455665555 7765 78888888888874 35679999999883 55675
No 103
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=21.91 E-value=3.8e+02 Score=28.92 Aligned_cols=126 Identities=14% Similarity=0.076 Sum_probs=72.1
Q ss_pred ceEEEecCcceEEEeccCCCC---ccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhc-----cc-----
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQ---PKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKY-----FV----- 803 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~---P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~-----L~----- 803 (1107)
-.+.||+|...+|++...... -+..+|+ + ..+....++.+.++++.+..+. .+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~----~----------~~~~~~~~~~i~~~i~~~~~~~~~~~gigi~~pG 90 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERVATERVPT----P----------TDDYPLLLETIAGLVAKYDQEFACEGKIGLGLPG 90 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEEC----C----------TTCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESE
T ss_pred EEEEEEECCCEEEEEEEeCCCcEEEEEEecC----C----------CCCHHHHHHHHHHHHHHHHHhcCCccEEEEEeec
Confidence 478999999999999875332 1122221 1 0123334555666666554321 11
Q ss_pred -cCCCCceEEEEeccCCchHHHHHHHHHHhcccCcceeeecccchhhhcc-----c--CCceEEEEEcCCCceEEEEEEc
Q psy9135 804 -TSPKDKRIVVVESVLTPTVWRNTLAKVLFKHYEVLSLLYVPSHLVSLCT-----L--GVNTGLVLDIGYSEATLLPVYE 875 (1107)
Q Consensus 804 -~~~~~~~vll~e~~~~~~~~re~l~eiLFE~~~vpsv~~~~~~~lalya-----~--g~~tglVVDiG~~~T~v~PV~d 875 (1107)
+++++. ++. .+. .+--....+.+.|=+.|++| +++.++.-+++++ . +..+.++|-+|.+ .-..-|.+
T Consensus 91 ~vd~~~g-~v~-~~~-~~~~~~~~l~~~l~~~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~~ 165 (327)
T 4db3_A 91 MEDADDA-TVL-TVN-VPAAKGKPLRADLEAKIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIYE 165 (327)
T ss_dssp EECTTTC-CEE-ESS-SGGGTTSCHHHHHHHHHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEET
T ss_pred cEeCCCC-EEE-cCC-CccccCCCHHHHHHHHHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEEC
Confidence 222222 332 222 22111123445555677888 8999999888765 2 4578899999977 45566779
Q ss_pred CEeecc
Q psy9135 876 GVPVLC 881 (1107)
Q Consensus 876 G~~l~~ 881 (1107)
|.++..
T Consensus 166 G~l~~G 171 (327)
T 4db3_A 166 GKVFSG 171 (327)
T ss_dssp TEECCC
T ss_pred CEEeec
Confidence 987654
No 104
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=20.75 E-value=2.8e+02 Score=31.37 Aligned_cols=128 Identities=13% Similarity=0.138 Sum_probs=72.3
Q ss_pred ceEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhccccCC----------
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVTSP---------- 806 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~~~---------- 806 (1107)
..+.||+|...+|++...... +.+....+..+ ..+....++.+.+.++.++.+ .+.++
T Consensus 109 ~~lGIDiGgt~i~~~l~d~~G-~il~~~~~~~~----------~~~~~~~~~~l~~~i~~~~~~-~~~~~~~i~gigi~~ 176 (429)
T 1z05_A 109 QFLSMRLGRGYLTIALHELGG-EVLIDTKIDIH----------EIDQDDVLARLLFEIEEFFQT-YAAQLDRVTSIAITL 176 (429)
T ss_dssp EEEEEEEETTEEEEEEEETTS-CEEEEEEEECC----------CCBHHHHHHHHHHHHHHHHHH-TTTTCCEEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCC-CEEEEEEEcCC----------CCCHHHHHHHHHHHHHHHHHh-cCCCcCceEEEEEec
Confidence 368999999999999864332 11111111000 112344466677777666532 22111
Q ss_pred -----CCceEEEEeccCCchHHH-HHHHHHHhcccCcceeeecccchhhhcc-----c--CCceEEEEEcCCCceEEEEE
Q psy9135 807 -----KDKRIVVVESVLTPTVWR-NTLAKVLFKHYEVLSLLYVPSHLVSLCT-----L--GVNTGLVLDIGYSEATLLPV 873 (1107)
Q Consensus 807 -----~~~~vll~e~~~~~~~~r-e~l~eiLFE~~~vpsv~~~~~~~lalya-----~--g~~tglVVDiG~~~T~v~PV 873 (1107)
.+...++.-|.+ + ++ ..+.+.|=+.|++| +++.+++-+++++ . +..+.++|-+|.+ .-..-|
T Consensus 177 pG~vd~~~g~v~~~~~l-~--w~~~~l~~~L~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 177 PGLVNSEQGIVLQMPHY-N--VKNLALGPEIYKATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp SSEEETTTTEEEECSSS-B--CSSBCHHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred cCcEeCCCCeEeecCCC-C--CCCCCHHHHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 111222222222 1 11 23444455567888 8899999888775 2 4578999999986 456667
Q ss_pred EcCEeecc
Q psy9135 874 YEGVPVLC 881 (1107)
Q Consensus 874 ~dG~~l~~ 881 (1107)
.+|.++..
T Consensus 252 ~~G~l~~G 259 (429)
T 1z05_A 252 LDGRVLQG 259 (429)
T ss_dssp ETTEECCT
T ss_pred ECCEEeeC
Confidence 78887653
No 105
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=20.44 E-value=6.3e+02 Score=27.10 Aligned_cols=130 Identities=13% Similarity=-0.004 Sum_probs=75.8
Q ss_pred ceEEEecCcceEEEeccCCCCccEEEecceeccCCCCccceeecCCHHhhHHHHHHHHHHHHHhccccCCC--CceEEEE
Q psy9135 737 TGVVLDIGSKYTKYGIFGSFQPKGFIKSQVKDPHTNKLRNLYEYKDADDLYGLLIEFIRKIFFKYFVTSPK--DKRIVVV 814 (1107)
Q Consensus 737 ~~vViD~Gs~~iK~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~~~d~le~i~~~~~~~~L~~~~~--~~~vll~ 814 (1107)
-.+.||+|...+|++......- .+...... +. . ....+....|+.+.+.++.++.+ .+.++. -..+-+.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~-i~~~~~~~-~~-----~-~~~~~~~~~~~~i~~~i~~~~~~-~~~~~~~~i~gigi~ 77 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK-ILAEADGL-ST-----N-HWLIGTDKCVERINEMVNRAKRK-AGVDPLVPLRSLGLS 77 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC-EEEEEEEC-CC-----C-HHHHCHHHHHHHHHHHHHHHHHH-HTCCTTCCBSEEEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC-EEEEEeCC-CC-----C-cccCCHHHHHHHHHHHHHHHHHh-cCCCcccceeEEEEe
Confidence 4689999999999998754321 11111000 00 0 00012334467777777776633 333332 2346677
Q ss_pred eccCCchHHHHHHHHHHhcccC---cceeeecccchhhhcccCCceEEEEEcCCCceEEEEEE-cCE
Q psy9135 815 ESVLTPTVWRNTLAKVLFKHYE---VLSLLYVPSHLVSLCTLGVNTGLVLDIGYSEATLLPVY-EGV 877 (1107)
Q Consensus 815 e~~~~~~~~re~l~eiLFE~~~---vpsv~~~~~~~lalya~g~~tglVVDiG~~~T~v~PV~-dG~ 877 (1107)
.|-.........+.+.|=+.|+ .| +++.++..+++++....++++|-+|.+.-. ..|. +|.
T Consensus 78 ~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~v~v~~GTGig~-~~v~~~G~ 142 (347)
T 2ch5_A 78 LSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGGVVLISGTGSNC-RLINPDGS 142 (347)
T ss_dssp ETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCEEEEEESSSEEE-EEECTTSC
T ss_pred ccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCcEEEEEcCCcee-EEEcCCCC
Confidence 7766555545566666666675 55 888999988888753467888888876533 3332 553
Done!