AmiGO: BLAST Results


BLAST match view associations BLAST with aph-1 aph-1 aph-1 anterior pharynx defective 1	protein from Drosophila melanogaster	7.1e-34
BLAST match view associations BLAST with aph1b aph1b aph1b anterior pharynx defective 1B	gene_product from Danio rerio	3.3e-30
BLAST match view associations BLAST with Aph1b Aph1b Aph1b anterior pharynx defective 1 homolog B (C. elegans)	gene from Rattus norvegicus	6.6e-28
BLAST match view associations BLAST with zgc:114200 zgc:114200 zgc:114200	gene_product from Danio rerio	6.6e-28
BLAST match view associations BLAST with APH1B APH1B APH1B Gamma-secretase subunit APH-1B	protein from Homo sapiens	8.4e-28
BLAST match view associations BLAST with Aph1b Aph1b Aph1b anterior pharynx defective 1b homolog (C. elegans)	protein from Mus musculus	2.2e-27
BLAST match view associations BLAST with Aph1c Aph1c Aph1c anterior pharynx defective 1c homolog (C. elegans)	protein from Mus musculus	2.5e-26
BLAST match view associations BLAST with APH1A APH1A APH1A Uncharacterized protein	protein from Gallus gallus	9.1e-25
BLAST match view associations BLAST with APH1A APH1A APH1A Anterior pharynx defective 1 homolog A (C. elegans)	protein from Homo sapiens	3.8e-23
BLAST match view associations BLAST with APH1B APH1B APH1B Gamma-secretase subunit APH-1B	protein from Homo sapiens	3.0e-21
BLAST match view associations BLAST with APH1B APH1B APH1B Uncharacterized protein	protein from Canis lupus familiaris	8.0e-21
BLAST match view associations BLAST with Aph1a Aph1a Aph1a APH1A gamma secretase subunit	gene from Rattus norvegicus	9.2e-20
BLAST match view associations BLAST with APH1A APH1A APH1A Anterior pharynx defective 1 homolog A (C. elegans)	protein from Bos taurus	1.2e-19
BLAST match view associations BLAST with APH1A APH1A APH1A Gamma-secretase subunit APH-1A	protein from Homo sapiens	1.2e-19
BLAST match view associations BLAST with Aph1a Aph1a Aph1a anterior pharynx defective 1a homolog (C. elegans)	protein from Mus musculus	1.2e-19
BLAST match view associations BLAST with APH1A APH1A APH1A Anterior pharynx defective 1 homolog A	protein from Canis lupus familiaris	1.5e-19
BLAST match view associations BLAST with APH1A APH1A APH1A Uncharacterized protein	protein from Sus scrofa	1.5e-19
BLAST match view associations BLAST with LOC100624829 LOC100624829 LOC100624829 Uncharacterized protein	protein from Sus scrofa	3.5e-15
BLAST match view associations BLAST with APH1B APH1B APH1B Uncharacterized protein	protein from Bos taurus	3.5e-13
BLAST match view associations BLAST with LOC691658 LOC691658 LOC691658 similar to anterior pharynx defective 1b homolog	gene from Rattus norvegicus	3.2e-11
BLAST match view associations BLAST with aph-1 aph-1 aph-1	gene from Caenorhabditis elegans	6.7e-10
BLAST match view associations BLAST with APH1B APH1B APH1B Gamma-secretase subunit APH-1B	protein from Homo sapiens	3.2e-09
BLAST match view associations BLAST with aph1 aph1 aph1 gamma-secretase subunit Aph-1	gene from Dictyostelium discoideum	2.9e-08

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy9136
        (186 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0031458 - symbol:aph-1 "anterior pharynx defective...   288  7.1e-34   2
ZFIN|ZDB-GENE-031118-31 - symbol:aph1b "anterior pharynx ...   254  3.3e-30   2
UNIPROTKB|Q0PY50 - symbol:Aph1b "APH-1B'" species:10116 "...   248  2.5e-28   2
RGD|1562468 - symbol:Aph1b "anterior pharynx defective 1 ...   248  6.6e-28   2
ZFIN|ZDB-GENE-050913-96 - symbol:zgc:114200 "zgc:114200" ...   243  6.6e-28   2
UNIPROTKB|Q8WW43 - symbol:APH1B "Gamma-secretase subunit ...   249  8.4e-28   2
MGI|MGI:3522097 - symbol:Aph1b "anterior pharynx defectiv...   241  2.2e-27   2
MGI|MGI:1915568 - symbol:Aph1c "anterior pharynx defectiv...   230  2.5e-26   2
UNIPROTKB|E1C2N9 - symbol:APH1A "Uncharacterized protein"...   207  9.1e-25   2
UNIPROTKB|Q5TB21 - symbol:APH1A "Anterior pharynx defecti...   267  3.8e-23   1
UNIPROTKB|H0YKZ9 - symbol:APH1B "Gamma-secretase subunit ...   249  3.0e-21   1
UNIPROTKB|J9NV63 - symbol:APH1B "Uncharacterized protein"...   245  8.0e-21   1
RGD|1311546 - symbol:Aph1a "anterior pharynx defective 1 ...   235  9.2e-20   1
UNIPROTKB|D4ACK8 - symbol:Aph1a "Protein Aph1a" species:1...   235  9.2e-20   1
UNIPROTKB|Q3SZ69 - symbol:APH1A "Uncharacterized protein"...   234  1.2e-19   1
UNIPROTKB|Q96BI3 - symbol:APH1A "Gamma-secretase subunit ...   234  1.2e-19   1
MGI|MGI:2385110 - symbol:Aph1a "anterior pharynx defectiv...   234  1.2e-19   1
UNIPROTKB|E2R5H5 - symbol:APH1A "Uncharacterized protein"...   233  1.5e-19   1
UNIPROTKB|I3L8R2 - symbol:APH1A "Uncharacterized protein"...   233  1.5e-19   1
UNIPROTKB|F1S090 - symbol:APH1B "Uncharacterized protein"...   128  3.5e-15   2
UNIPROTKB|E1BB58 - symbol:APH1B "Uncharacterized protein"...   128  3.5e-13   2
RGD|1597236 - symbol:LOC691658 "similar to anterior phary...   112  3.2e-11   3
WB|WBGene00000147 - symbol:aph-1 species:6239 "Caenorhabd...   124  6.7e-10   2
UNIPROTKB|H0YLT0 - symbol:APH1B "Gamma-secretase subunit ...   136  3.2e-09   1
DICTYBASE|DDB_G0267976 - symbol:aph1 "gamma-secretase sub...   120  2.9e-08   2


>FB|FBgn0031458 [details] [associations]
            symbol:aph-1 "anterior pharynx defective 1" species:7227
            "Drosophila melanogaster" [GO:0005886 "plasma membrane"
            evidence=NAS] [GO:0007219 "Notch signaling pathway" evidence=IMP]
            [GO:0004175 "endopeptidase activity" evidence=IMP] [GO:0005887
            "integral to plasma membrane" evidence=NAS] [GO:0016485 "protein
            processing" evidence=IEA] [GO:0043085 "positive regulation of
            catalytic activity" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR009294 Pfam:PF06105
            GO:GO:0043085 GO:GO:0005887 EMBL:AE014134 GO:GO:0007219
            GO:GO:0004175 GO:GO:0016485 eggNOG:NOG300477 KO:K06172 OMA:FIAFGPP
            PANTHER:PTHR12889 GeneTree:ENSGT00390000002049 CTD:33467
            EMBL:AF508786 EMBL:AY051658 RefSeq:NP_608710.1 UniGene:Dm.19771
            ProteinModelPortal:Q9VQG2 MINT:MINT-827568 STRING:Q9VQG2
            PaxDb:Q9VQG2 PRIDE:Q9VQG2 EnsemblMetazoa:FBtr0077716 GeneID:33467
            KEGG:dme:Dmel_CG2855 FlyBase:FBgn0031458 InParanoid:Q9VQG2
            OrthoDB:EOG4DZ0BC PhylomeDB:Q9VQG2 GenomeRNAi:33467 NextBio:783710
            Bgee:Q9VQG2 GermOnline:CG2855 Uniprot:Q9VQG2
        Length = 238

 Score = 288 (106.4 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
 Identities = 58/148 (39%), Positives = 92/148 (62%)

Query:    30 VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGES 88
             ++ +  GL  V+ D    DN + +AYVSGLG+G IS  F+L+NVL  +SGPGTMGLKG +
Sbjct:    84 LRSTEQGLHAVAEDTRVTDNKHILAYVSGLGFGIISGMFALVNVLADMSGPGTMGLKGGT 143

Query:    89 QYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVVLSHIFISSYTWYMNSSGLF 148
             + F  T++       LLH FWS++FF   +  N   +  VV SH+F+S  T  +N++ L+
Sbjct:   144 ELFFVTSAAQALSIILLHTFWSVIFFNAFDTNNYIHIGYVVFSHLFVSLIT-LLNANELY 202

Query:   149 SVLFIIVF--TLFTAMFAYKVIGGSKKT 174
             +   +I +  T+ T + A++V GG+ ++
Sbjct:   203 TTTLLINYLVTILTGVLAFRVAGGTSRS 230

 Score = 96 (38.9 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
 Identities = 18/31 (58%), Positives = 21/31 (67%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT  EF GCT  AFGP  A+F+ TI  DPV+
Sbjct:     1 MTLPEFFGCTFIAFGPPFALFVFTIANDPVR 31


>ZFIN|ZDB-GENE-031118-31 [details] [associations]
            symbol:aph1b "anterior pharynx defective 1B"
            species:7955 "Danio rerio" [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
            [GO:0043085 "positive regulation of catalytic activity"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] InterPro:IPR009294
            Pfam:PF06105 ZFIN:ZDB-GENE-031118-31 GO:GO:0016021 GO:GO:0043085
            GO:GO:0007219 GO:GO:0016485 eggNOG:NOG300477 HOGENOM:HOG000007541
            HOVERGEN:HBG050541 KO:K06172 OrthoDB:EOG4K6G55 PANTHER:PTHR12889
            GeneTree:ENSGT00390000002049 EMBL:AF512428 EMBL:AY423036
            EMBL:BC071492 IPI:IPI00488693 RefSeq:NP_956409.1 UniGene:Dr.78326
            STRING:Q8JHE9 PRIDE:Q8JHE9 Ensembl:ENSDART00000008096 GeneID:386808
            KEGG:dre:386808 CTD:83464 InParanoid:Q8JHE9 OMA:TFLSPHY
            NextBio:20814026 Bgee:Q8JHE9 Uniprot:Q8JHE9
        Length = 258

 Score = 254 (94.5 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
 Identities = 54/147 (36%), Positives = 88/147 (59%)

Query:    30 VKKSRGGLQYVSDRNTMD-NTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGES 88
             +KK+  GL  +S  +TM  +   +AYVSGLG+G +S AFS++N+L    GPGT+G+ GES
Sbjct:    94 LKKANEGLLALSQEDTMPISMRQLAYVSGLGFGFMSGAFSVVNILSDSLGPGTVGIHGES 153

Query:    89 QYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVVLSHIFISSYTWYMNSSGLF 148
             Q++  +++  T    LLH+FW +VFF   E +    + +VV SH+ +S  T ++N     
Sbjct:   154 QHYFISSAFMTLAIILLHMFWGVVFFEACERQRWWALGAVVASHLVVSCLT-FVNPHYQG 212

Query:   149 SVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             S++   +     A++AY   GGS + +
Sbjct:   213 SLIPTYIILSVMAVWAYLCAGGSLRNL 239

 Score = 95 (38.5 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GCT  AFGP IA+F+ TI +DP++
Sbjct:     1 MTVAVFFGCTFIAFGPAIALFMFTIARDPLR 31


>UNIPROTKB|Q0PY50 [details] [associations]
            symbol:Aph1b "APH-1B'" species:10116 "Rattus norvegicus"
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016485
            "protein processing" evidence=IEA] [GO:0043085 "positive regulation
            of catalytic activity" evidence=IEA] InterPro:IPR009294
            Pfam:PF06105 RGD:1562468 GO:GO:0016021 GO:GO:0043085 GO:GO:0016485
            eggNOG:NOG300477 HOGENOM:HOG000007541 HOVERGEN:HBG050541 KO:K06172
            OrthoDB:EOG4K6G55 PANTHER:PTHR12889 GeneTree:ENSGT00390000002049
            CTD:83464 OMA:TFLSPHY EMBL:BC166592 EMBL:DQ672552 IPI:IPI00373333
            RefSeq:NP_001040555.1 UniGene:Rn.103390 STRING:Q0PY50
            Ensembl:ENSRNOT00000024176 GeneID:300802 KEGG:rno:300802
            InParanoid:Q0PY50 NextBio:647547 Genevestigator:Q0PY50
            Uniprot:Q0PY50
        Length = 257

 Score = 248 (92.4 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 53/147 (36%), Positives = 87/147 (59%)

Query:    30 VKKSRGGLQYVSDRNTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGESQ 89
             +KK+  GL+ ++   T  +   +AYVSGLG+G +S  FS +N L    GPGT+G+ G+S 
Sbjct:    94 LKKASEGLKSINPEETAPSMRLLAYVSGLGFGIMSGVFSFVNTLSNALGPGTVGIHGDSP 153

Query:    90 YFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRT-LVASVVLSHIFISSYTWYMNSSGLF 148
              F   ++  T    +LHVFW IVFF G E KN+  ++ +V+L+H+ +S+ T       + 
Sbjct:   154 QFFLNSAFMTLVIIMLHVFWGIVFFDGCE-KNKWYILLTVLLTHLLVSTQTLLSPHYEVN 212

Query:   149 SVLFIIVFTLFTAMFAYKVIGGSKKTM 175
              V   I+  L   ++A+ V GGS++++
Sbjct:   213 LVTAYIIMVLM-GIWAFCVAGGSRRSL 238

 Score = 83 (34.3 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GC   AFGP +A++L TI  DP++
Sbjct:     1 MTAPVFFGCAFIAFGPALALYLFTIATDPLR 31


>RGD|1562468 [details] [associations]
            symbol:Aph1b "anterior pharynx defective 1 homolog B (C.
            elegans)" species:10116 "Rattus norvegicus" [GO:0004175
            "endopeptidase activity" evidence=ISO] [GO:0008152 "metabolic
            process" evidence=ISO] [GO:0008233 "peptidase activity"
            evidence=ISO] [GO:0016021 "integral to membrane" evidence=ISO]
            [GO:0016485 "protein processing" evidence=ISO] [GO:0030133
            "transport vesicle" evidence=ISO] InterPro:IPR009294 Pfam:PF06105
            RGD:1562468 GO:GO:0016021 GO:GO:0043085 GO:GO:0016485
            HOVERGEN:HBG050541 PANTHER:PTHR12889 OMA:TFLSPHY IPI:IPI00373333
            UniGene:Rn.103390 NextBio:647547 EMBL:BC098711 STRING:Q4G070
            UCSC:RGD:1562468 InParanoid:Q4G070 ArrayExpress:Q4G070
            Genevestigator:Q4G070 Uniprot:Q4G070
        Length = 256

 Score = 248 (92.4 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
 Identities = 53/147 (36%), Positives = 87/147 (59%)

Query:    30 VKKSRGGLQYVSDRNTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGESQ 89
             +KK+  GL+ ++   T  +   +AYVSGLG+G +S  FS +N L    GPGT+G+ G+S 
Sbjct:    93 LKKASEGLKSINPEETAPSMRLLAYVSGLGFGIMSGVFSFVNTLSNALGPGTVGIHGDSP 152

Query:    90 YFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRT-LVASVVLSHIFISSYTWYMNSSGLF 148
              F   ++  T    +LHVFW IVFF G E KN+  ++ +V+L+H+ +S+ T       + 
Sbjct:   153 QFFLNSAFMTLVIIMLHVFWGIVFFDGCE-KNKWYILLTVLLTHLLVSTQTLLSPHYEVN 211

Query:   149 SVLFIIVFTLFTAMFAYKVIGGSKKTM 175
              V   I+  L   ++A+ V GGS++++
Sbjct:   212 LVTAYIIMVLM-GIWAFCVAGGSRRSL 237

 Score = 79 (32.9 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query:     6 FLGCTMTAFGPVIAMFLTTIMQDPVK 31
             F GC   AFGP +A++L TI  DP++
Sbjct:     5 FFGCAFIAFGPALALYLFTIATDPLR 30


>ZFIN|ZDB-GENE-050913-96 [details] [associations]
            symbol:zgc:114200 "zgc:114200" species:7955 "Danio
            rerio" [GO:0043085 "positive regulation of catalytic activity"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016485 "protein processing" evidence=IEA] InterPro:IPR009294
            Pfam:PF06105 ZFIN:ZDB-GENE-050913-96 GO:GO:0016021 GO:GO:0043085
            GO:GO:0016485 eggNOG:NOG300477 HOGENOM:HOG000007541
            HOVERGEN:HBG050541 KO:K06172 OrthoDB:EOG4K6G55 PANTHER:PTHR12889
            EMBL:BC097248 IPI:IPI00837016 RefSeq:NP_001025300.1
            UniGene:Dr.15922 STRING:Q4V8Q7 GeneID:559336 KEGG:dre:559336
            NextBio:20882911 Uniprot:Q4V8Q7
        Length = 253

 Score = 243 (90.6 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
 Identities = 53/161 (32%), Positives = 93/161 (57%)

Query:    30 VKKSRGGLQYVSD-RNTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGES 88
             ++K+  GL  +SD  ++  +   MAYV+GLG+G +  AFS++N+L    GPGT+G+ G+S
Sbjct:    94 LRKATEGLAAISDDASSAISVRQMAYVAGLGFGVMRGAFSMINILSDSLGPGTVGIFGDS 153

Query:    89 QYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVVLSHIFISSYTWYMNSSGLF 148
             QY+  T ++ T   +LLH FW ++FF G E  +  ++A VV  H+ ++  +  +N     
Sbjct:   154 QYYFITAALMTLALTLLHTFWGVLFFEGCEKSSWWVIAVVVSLHLLVAGLS-LLNPLYEG 212

Query:   149 SVLFIIVFTLFTAMFAYKVIGGSKKTM---CNGENLIAEAN 186
             S+  +   TL   ++A+   GGS + +   C    + AE++
Sbjct:   213 SLPPVYCITLLMGIWAFFSSGGSLQNLSALCTRRKVEAESS 253

 Score = 84 (34.6 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GC   AFGP  A+F+ T+ +DP++
Sbjct:     1 MTLAVFFGCAFIAFGPAFALFVFTVAKDPLR 31


>UNIPROTKB|Q8WW43 [details] [associations]
            symbol:APH1B "Gamma-secretase subunit APH-1B" species:9606
            "Homo sapiens" [GO:0043085 "positive regulation of catalytic
            activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0008233 "peptidase activity" evidence=IDA] [GO:0016021
            "integral to membrane" evidence=IDA] [GO:0016485 "protein
            processing" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
            [GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0007220
            "Notch receptor processing" evidence=TAS] [GO:0031293 "membrane
            protein intracellular domain proteolysis" evidence=TAS] [GO:0048011
            "neurotrophin TRK receptor signaling pathway" evidence=TAS]
            [GO:0030133 "transport vesicle" evidence=IDA] Reactome:REACT_691
            InterPro:IPR009294 Pfam:PF06105 GO:GO:0016021 GO:GO:0005886
            GO:GO:0043085 Reactome:REACT_111102 GO:GO:0006915 GO:GO:0048011
            Pathway_Interaction_DB:p75ntrpathway
            Pathway_Interaction_DB:ps1pathway GO:GO:0007219 GO:GO:0007220
            GO:GO:0031293 GO:GO:0008233
            Pathway_Interaction_DB:syndecan_3_pathway GO:GO:0030133
            GO:GO:0016485 EMBL:CH471082 eggNOG:NOG300477 HOGENOM:HOG000007541
            HOVERGEN:HBG050541 OrthoDB:EOG4K6G55 PANTHER:PTHR12889 CTD:83464
            OMA:TFLSPHY EMBL:AF508794 EMBL:AB189172 EMBL:AL136671 EMBL:AY358698
            EMBL:AK291204 EMBL:AC016207 EMBL:BC020905 IPI:IPI00291632
            IPI:IPI00556559 RefSeq:NP_001139118.1 RefSeq:NP_112591.2
            UniGene:Hs.511703 ProteinModelPortal:Q8WW43 IntAct:Q8WW43
            STRING:Q8WW43 PhosphoSite:Q8WW43 DMDM:61252592 PRIDE:Q8WW43
            DNASU:83464 Ensembl:ENST00000261879 Ensembl:ENST00000380343
            GeneID:83464 KEGG:hsa:83464 UCSC:uc002ama.3 GeneCards:GC15P063647
            HGNC:HGNC:24080 MIM:607630 neXtProt:NX_Q8WW43 PharmGKB:PA142672600
            InParanoid:Q8WW43 PhylomeDB:Q8WW43 BindingDB:Q8WW43
            ChEMBL:CHEMBL2385 GenomeRNAi:83464 NextBio:72393
            ArrayExpress:Q8WW43 Bgee:Q8WW43 CleanEx:HS_APH1B
            Genevestigator:Q8WW43 GermOnline:ENSG00000138613 Uniprot:Q8WW43
        Length = 257

 Score = 249 (92.7 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 56/167 (33%), Positives = 96/167 (57%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVSDRNTMDNTYAMAYVSGLGYGTISAAFSL 69
             FG  +++++  + +      +KK+  GL+ ++   T  +   +AYVSGLG+G +S  FS 
Sbjct:    74 FGAFVSVYIQEMFRFAYYKLLKKASEGLKSINPGETAPSMRLLAYVSGLGFGIMSGVFSF 133

Query:    70 LNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVV 129
             +N L    GPGT+G+ G+S  F   ++  T    LLHVFW IVFF G E K   ++  V+
Sbjct:   134 VNTLSDSLGPGTVGIHGDSPQFFLYSAFMTLVIILLHVFWGIVFFDGCEKKKWGILLIVL 193

Query:   130 LSHIFISSYTWYMNSSGL-FSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             L+H+ +S+ T+  +  G+  +  FII+  + T  +A+   GGS +++
Sbjct:   194 LTHLLVSAQTFISSYYGINLASAFIILVLMGT--WAFLAAGGSCRSL 238

 Score = 77 (32.2 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GC   AFGP +A+++ TI  +P++
Sbjct:     1 MTAAVFFGCAFIAFGPALALYVFTIATEPLR 31


>MGI|MGI:3522097 [details] [associations]
            symbol:Aph1b "anterior pharynx defective 1b homolog (C.
            elegans)" species:10090 "Mus musculus" [GO:0004175 "endopeptidase
            activity" evidence=IGI] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0008152 "metabolic process" evidence=IGI]
            [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016485 "protein processing"
            evidence=IEA] [GO:0043085 "positive regulation of catalytic
            activity" evidence=IEA] Reactome:REACT_99130 InterPro:IPR009294
            Pfam:PF06105 MGI:MGI:3522097 GO:GO:0016021 GO:GO:0005886
            GO:GO:0043085 GO:GO:0007219 Reactome:REACT_115202 GO:GO:0004175
            GO:GO:0016485 eggNOG:NOG300477 HOGENOM:HOG000007541
            HOVERGEN:HBG050541 KO:K06172 OrthoDB:EOG4K6G55 PANTHER:PTHR12889
            GeneTree:ENSGT00390000002049 CTD:83464 OMA:TFLSPHY EMBL:AK028521
            EMBL:AK049828 EMBL:AK154847 EMBL:BC079659 IPI:IPI00226767
            IPI:IPI00229029 RefSeq:NP_808251.1 UniGene:Mm.41291 STRING:Q8C7N7
            PhosphoSite:Q8C7N7 PRIDE:Q8C7N7 Ensembl:ENSMUST00000034934
            Ensembl:ENSMUST00000168309 GeneID:208117 KEGG:mmu:208117
            UCSC:uc009qfg.1 InParanoid:Q8C7N7 BindingDB:Q8C7N7
            ChEMBL:CHEMBL3786 NextBio:372158 Bgee:Q8C7N7 Genevestigator:Q8C7N7
            GermOnline:ENSMUSG00000032375 Uniprot:Q8C7N7
        Length = 257

 Score = 241 (89.9 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
 Identities = 54/150 (36%), Positives = 89/150 (59%)

Query:    30 VKKSRGGLQYVSDRNTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGESQ 89
             +KK+  GL+ ++   T  +   +AYVSGLG+G +S  FS +N L    GPGT+G+ G+S 
Sbjct:    94 LKKASEGLKSINPEETAPSMRLLAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDSP 153

Query:    90 YFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNR--TLVASVVLSHIFISSYTWYMNSSGL 147
              F   ++  T    +LHVFW +VFF G E KN+  TL+ +V+L+H+ +S+ T+    S  
Sbjct:   154 QFFLNSAFMTLVVIMLHVFWGVVFFDGCE-KNKWYTLL-TVLLTHLVVSTQTFL---SPY 208

Query:   148 FSVLFIIVFTLFTAM--FAYKVIGGSKKTM 175
             + V  +  + +   M  +A+ V GGS +++
Sbjct:   209 YEVNLVTAYIIMVLMGIWAFYVAGGSCRSL 238

 Score = 81 (33.6 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GC   AFGP +A+++ TI  DP++
Sbjct:     1 MTAAVFFGCAFIAFGPALALYVFTIATDPLR 31


>MGI|MGI:1915568 [details] [associations]
            symbol:Aph1c "anterior pharynx defective 1c homolog (C.
            elegans)" species:10090 "Mus musculus" [GO:0001656 "metanephros
            development" evidence=IMP] [GO:0004175 "endopeptidase activity"
            evidence=IGI] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=ISA] [GO:0016020
            "membrane" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=ISA] [GO:0016485 "protein processing" evidence=IGI;ISA]
            [GO:0043085 "positive regulation of catalytic activity"
            evidence=IEA] Reactome:REACT_99130 InterPro:IPR009294 Pfam:PF06105
            MGI:MGI:1915568 GO:GO:0016021 GO:GO:0005886 GO:GO:0043085
            GO:GO:0007219 Reactome:REACT_115202 GO:GO:0004175 GO:GO:0016485
            eggNOG:NOG300477 HOGENOM:HOG000007541 HOVERGEN:HBG050541 KO:K06172
            OrthoDB:EOG4K6G55 GO:GO:0001656 PANTHER:PTHR12889
            GeneTree:ENSGT00390000002049 EMBL:AK002310 EMBL:AK155147
            EMBL:BC050923 EMBL:BC063254 IPI:IPI00121592 RefSeq:NP_080950.1
            UniGene:Mm.284229 ProteinModelPortal:Q9DCZ9 STRING:Q9DCZ9
            TCDB:9.B.47.1.1 PRIDE:Q9DCZ9 Ensembl:ENSMUST00000169282
            GeneID:68318 KEGG:mmu:68318 UCSC:uc009qfe.1 CTD:68318
            InParanoid:Q9DCZ9 OMA:NPEEDIA ChiTaRS:Aph1c NextBio:326993
            Bgee:Q9DCZ9 Genevestigator:Q9DCZ9 GermOnline:ENSMUSG00000053040
            Uniprot:Q9DCZ9
        Length = 258

 Score = 230 (86.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 53/151 (35%), Positives = 90/151 (59%)

Query:    30 VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGES 88
             +KK+  GL+ ++ + +   +   +AYVSGLG+G +S  FS +N L    GPGT+G+ G+S
Sbjct:    94 LKKASEGLKSINPEEDIAPSMRLLAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDS 153

Query:    89 QYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNR--TLVASVVLSHIFISSYTWYMNSSG 146
               F   ++  T    +LHVFW +VFF G E KN+  TL+ +V+L+H+ +S+ T+    S 
Sbjct:   154 PQFFLNSAFMTLVVIMLHVFWGVVFFDGCE-KNKWYTLL-TVLLTHLVVSTQTFL---SP 208

Query:   147 LFSVLFIIVFTLFTAM--FAYKVIGGSKKTM 175
              + V  +  + +   M  +A+ V GGS +++
Sbjct:   209 YYEVNLVTAYIIMVLMGIWAFYVAGGSCRSL 239

 Score = 82 (33.9 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GC   AFGP  A++L TI  DP++
Sbjct:     1 MTLPVFFGCAFIAFGPAFALYLFTIATDPLR 31


>UNIPROTKB|E1C2N9 [details] [associations]
            symbol:APH1A "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016485 "protein processing" evidence=IEA] [GO:0043085
            "positive regulation of catalytic activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0030133
            "transport vesicle" evidence=IEA] InterPro:IPR009294 Pfam:PF06105
            GO:GO:0005783 GO:GO:0005794 GO:GO:0043085 GO:GO:0005887
            GO:GO:0042987 GO:GO:0004175 GO:GO:0006509 GO:GO:0007220
            GO:GO:0031293 GO:GO:0016485 OMA:FIAFGPP PANTHER:PTHR12889
            GeneTree:ENSGT00390000002049 EMBL:AADN02060550 EMBL:AADN02060551
            IPI:IPI00599869 Ensembl:ENSGALT00000004064 Uniprot:E1C2N9
        Length = 211

 Score = 207 (77.9 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
 Identities = 41/112 (36%), Positives = 68/112 (60%)

Query:    30 VKKSRGGLQYVSDRNTMD-NTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGES 88
             ++K+  GL  +S+      +   MAYV+G+G+G +S AFS++N+L    GPGT+G+ G+S
Sbjct:    94 LRKAIEGLVALSEDGCSPISIQQMAYVAGVGFGLMSGAFSMINLLADALGPGTVGIHGDS 153

Query:    89 QYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVVLSHIFISSYTW 140
             Q +  T++  T     LH FW I+FF G E +    + +VV+ H+ +S  T+
Sbjct:   154 QLYFLTSAFMTMVLIFLHTFWGILFFHGCENRRWWEIVAVVVMHLAVSGSTF 205

 Score = 90 (36.7 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GCT  AFGP  ++FL TI +DP++
Sbjct:     1 MTLAVFFGCTFIAFGPAFSLFLFTIARDPLR 31


>UNIPROTKB|Q5TB21 [details] [associations]
            symbol:APH1A "Anterior pharynx defective 1 homolog A (C.
            elegans)" species:9606 "Homo sapiens" [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016485 "protein processing"
            evidence=IEA] [GO:0043085 "positive regulation of catalytic
            activity" evidence=IEA] InterPro:IPR009294 Pfam:PF06105
            GO:GO:0016021 GO:GO:0043085 GO:GO:0016485 EMBL:AL138795
            UniGene:Hs.108408 UniGene:Hs.735911 HGNC:HGNC:29509
            HOGENOM:HOG000007541 HOVERGEN:HBG050541 PANTHER:PTHR12889
            IPI:IPI01014631 STRING:Q5TB21 Ensembl:ENST00000236017
            Uniprot:Q5TB21
        Length = 150

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 58/146 (39%), Positives = 82/146 (56%)

Query:     6 FLGCTMTAFGPVIAMFLTTIMQDPVK-------KSRGGLQYVS-DRNTMDNTYAMAYVSG 57
             F GCT  AFGP  A+FL T+  DP++       K+  GL  +S D  +  +   MAYVSG
Sbjct:     6 FFGCTFVAFGPAFALFLITVAGDPLRVIILVAGKADEGLASLSEDGRSPISIRQMAYVSG 65

Query:    58 LGYGTISAAFSLLNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGV 117
             L +G IS  FS++N+L    GPG +G+ G+S Y+  T++  T    LLH FW +VFF   
Sbjct:    66 LSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDAC 125

Query:   118 EIKNRTLVASVVLSHIFISSYTWYMN 143
             E +    +  VV SH+  S  T ++N
Sbjct:   126 ERRRYWALGLVVGSHLLTSGLT-FLN 150


>UNIPROTKB|H0YKZ9 [details] [associations]
            symbol:APH1B "Gamma-secretase subunit APH-1B" species:9606
            "Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016485 "protein processing" evidence=IEA] [GO:0043085
            "positive regulation of catalytic activity" evidence=IEA]
            InterPro:IPR009294 Pfam:PF06105 GO:GO:0016021 GO:GO:0043085
            GO:GO:0016485 PANTHER:PTHR12889 EMBL:AC016207 HGNC:HGNC:24080
            Ensembl:ENST00000560890 Bgee:H0YKZ9 Uniprot:H0YKZ9
        Length = 189

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 56/167 (33%), Positives = 96/167 (57%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVSDRNTMDNTYAMAYVSGLGYGTISAAFSL 69
             FG  +++++  + +      +KK+  GL+ ++   T  +   +AYVSGLG+G +S  FS 
Sbjct:    20 FGAFVSVYIQEMFRFAYYKLLKKASEGLKSINPGETAPSMRLLAYVSGLGFGIMSGVFSF 79

Query:    70 LNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVV 129
             +N L    GPGT+G+ G+S  F   ++  T    LLHVFW IVFF G E K   ++  V+
Sbjct:    80 VNTLSDSLGPGTVGIHGDSPQFFLYSAFMTLVIILLHVFWGIVFFDGCEKKKWGILLIVL 139

Query:   130 LSHIFISSYTWYMNSSGL-FSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             L+H+ +S+ T+  +  G+  +  FII+  + T  +A+   GGS +++
Sbjct:   140 LTHLLVSAQTFISSYYGINLASAFIILVLMGT--WAFLAAGGSCRSL 184


>UNIPROTKB|J9NV63 [details] [associations]
            symbol:APH1B "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043085 "positive regulation of catalytic
            activity" evidence=IEA] [GO:0016485 "protein processing"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            InterPro:IPR009294 Pfam:PF06105 GO:GO:0016021 GO:GO:0043085
            GO:GO:0016485 PANTHER:PTHR12889 GeneTree:ENSGT00390000002049
            OMA:LAYAFMT EMBL:AAEX03016201 Ensembl:ENSCAFT00000047454
            Uniprot:J9NV63
        Length = 203

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 50/146 (34%), Positives = 85/146 (58%)

Query:    30 VKKSRGGLQYVSDRNTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGESQ 89
             +KK+  GL+ ++   T  +   +AYVSGLG+G +S  F+ +N L    GPGT+G+ G+S 
Sbjct:    40 LKKASEGLKSINPDETTPSMRLLAYVSGLGFGIMSGVFAFVNTLSDSLGPGTVGIHGDSP 99

Query:    90 YFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVVLSHIFISSYTWYMNSSGLFS 149
              F   ++  T    LLHVFW I+FF G E K  + +  V+L+H+ +S+ T+     G+ +
Sbjct:   100 QFFLNSAFMTLVIILLHVFWGIIFFDGCEKKKWSALLIVLLTHLLVSALTFISPHYGI-N 158

Query:   150 VLFIIVFTLFTAMFAYKVIGGSKKTM 175
             ++   +  L   ++A+ V GGS + +
Sbjct:   159 LVSTYMIMLLMGIWAFFVAGGSCRNL 184


>RGD|1311546 [details] [associations]
            symbol:Aph1a "anterior pharynx defective 1 homolog A (C.
            elegans)" species:10116 "Rattus norvegicus" [GO:0001656
            "metanephros development" evidence=IEA;ISO] [GO:0004175
            "endopeptidase activity" evidence=IEA;ISO] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
            [GO:0005887 "integral to plasma membrane" evidence=IEA;ISO]
            [GO:0006509 "membrane protein ectodomain proteolysis"
            evidence=IEA;ISO] [GO:0007220 "Notch receptor processing"
            evidence=IEA;ISO] [GO:0008152 "metabolic process" evidence=ISO]
            [GO:0016485 "protein processing" evidence=IEA;ISO] [GO:0031293
            "membrane protein intracellular domain proteolysis"
            evidence=IEA;ISO] [GO:0042987 "amyloid precursor protein catabolic
            process" evidence=IEA;ISO] [GO:0043085 "positive regulation of
            catalytic activity" evidence=IEA;ISO] InterPro:IPR009294
            Pfam:PF06105 RGD:1311546 GO:GO:0016021 GO:GO:0043085 GO:GO:0016485
            CTD:51107 eggNOG:NOG300477 HOGENOM:HOG000007541 HOVERGEN:HBG050541
            KO:K06172 OrthoDB:EOG4K6G55 PANTHER:PTHR12889
            GeneTree:ENSGT00390000002049 EMBL:CH474015 UniGene:Rn.22786
            EMBL:BC087081 IPI:IPI00781050 RefSeq:NP_001014277.1 IntAct:Q5PQQ3
            STRING:Q5PQQ3 Ensembl:ENSRNOT00000056289 GeneID:365872
            KEGG:rno:365872 UCSC:RGD:1311546 NextBio:688236
            Genevestigator:Q5PQQ3 Uniprot:Q5PQQ3
        Length = 247

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 56/167 (33%), Positives = 90/167 (53%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFS 68
             FG  +++ L  + +      +KK+  GL  +S D  +  +   MAYVSGL +G IS  FS
Sbjct:    74 FGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFS 133

Query:    69 LLNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASV 128
             ++N+L    GPG +G+ G+S Y+  T++  T    LLH FW +VFF   E +    +  V
Sbjct:   134 VINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLV 193

Query:   129 VLSHIFISSYTWYMNSSGLFSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             V SH+  S  T ++N     S+L I   T+   ++A+   GGS +++
Sbjct:   194 VGSHLLTSGLT-FLNPWYEASLLPIYAVTVSMGLWAFVTAGGSLRSI 239


>UNIPROTKB|D4ACK8 [details] [associations]
            symbol:Aph1a "Protein Aph1a" species:10116 "Rattus
            norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016485 "protein processing" evidence=IEA] [GO:0043085
            "positive regulation of catalytic activity" evidence=IEA]
            InterPro:IPR009294 Pfam:PF06105 RGD:1311546 GO:GO:0005783
            GO:GO:0005794 GO:GO:0043085 GO:GO:0005887 GO:GO:0042987
            GO:GO:0004175 GO:GO:0006509 GO:GO:0007220 GO:GO:0031293
            GO:GO:0016485 OMA:FIAFGPP GO:GO:0001656 PANTHER:PTHR12889
            EMBL:CH474015 IPI:IPI00368289 UniGene:Rn.22786
            Ensembl:ENSRNOT00000032722 Uniprot:D4ACK8
        Length = 265

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 56/167 (33%), Positives = 90/167 (53%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFS 68
             FG  +++ L  + +      +KK+  GL  +S D  +  +   MAYVSGL +G IS  FS
Sbjct:    74 FGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFS 133

Query:    69 LLNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASV 128
             ++N+L    GPG +G+ G+S Y+  T++  T    LLH FW +VFF   E +    +  V
Sbjct:   134 VINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLV 193

Query:   129 VLSHIFISSYTWYMNSSGLFSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             V SH+  S  T ++N     S+L I   T+   ++A+   GGS +++
Sbjct:   194 VGSHLLTSGLT-FLNPWYEASLLPIYAVTVSMGLWAFVTAGGSLRSI 239


>UNIPROTKB|Q3SZ69 [details] [associations]
            symbol:APH1A "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043085 "positive regulation of catalytic activity"
            evidence=IEA] [GO:0042987 "amyloid precursor protein catabolic
            process" evidence=IEA] [GO:0031293 "membrane protein intracellular
            domain proteolysis" evidence=IEA] [GO:0016485 "protein processing"
            evidence=IEA] [GO:0007220 "Notch receptor processing" evidence=IEA]
            [GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA]
            [GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
            [GO:0001656 "metanephros development" evidence=IEA]
            InterPro:IPR009294 Pfam:PF06105 GO:GO:0005783 GO:GO:0005794
            GO:GO:0043085 GO:GO:0005887 GO:GO:0042987 GO:GO:0004175
            GO:GO:0006509 GO:GO:0007220 GO:GO:0031293 GO:GO:0016485 CTD:51107
            eggNOG:NOG300477 HOGENOM:HOG000007541 HOVERGEN:HBG050541 KO:K06172
            OMA:FIAFGPP OrthoDB:EOG4K6G55 GO:GO:0001656 PANTHER:PTHR12889
            GeneTree:ENSGT00390000002049 EMBL:DAAA02007262 EMBL:BC103090
            IPI:IPI00685604 RefSeq:NP_001029842.1 UniGene:Bt.48923
            STRING:Q3SZ69 Ensembl:ENSBTAT00000046131 GeneID:539247
            KEGG:bta:539247 NextBio:20877875 Uniprot:Q3SZ69
        Length = 247

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 56/167 (33%), Positives = 90/167 (53%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFS 68
             FG  +++ L  + +      +KK+  GL  +S D  +  +   MAYVSGL +G IS  FS
Sbjct:    74 FGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFS 133

Query:    69 LLNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASV 128
             ++N+L    GPG +G+ G+S Y+  T++  T    LLH FW +VFF   E +    +  V
Sbjct:   134 VINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLV 193

Query:   129 VLSHIFISSYTWYMNSSGLFSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             V SH+  S  T ++N     S+L I   T+   ++A+   GGS +++
Sbjct:   194 VGSHLLTSGLT-FLNPWYEASLLPIYAVTISMGLWAFITAGGSFRSI 239


>UNIPROTKB|Q96BI3 [details] [associations]
            symbol:APH1A "Gamma-secretase subunit APH-1A" species:9606
            "Homo sapiens" [GO:0001656 "metanephros development" evidence=IEA]
            [GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005789
            "endoplasmic reticulum membrane" evidence=IEA] [GO:0032580 "Golgi
            cisterna membrane" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0042987 "amyloid precursor protein catabolic
            process" evidence=IMP;TAS] [GO:0007220 "Notch receptor processing"
            evidence=IMP;TAS] [GO:0031293 "membrane protein intracellular
            domain proteolysis" evidence=IMP;TAS] [GO:0043085 "positive
            regulation of catalytic activity" evidence=IDA] [GO:0005794 "Golgi
            apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
            evidence=IDA] [GO:0005887 "integral to plasma membrane"
            evidence=IDA] [GO:0006509 "membrane protein ectodomain proteolysis"
            evidence=IDA] [GO:0016485 "protein processing" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=TAS] [GO:0006915 "apoptotic
            process" evidence=TAS] [GO:0007219 "Notch signaling pathway"
            evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
            pathway" evidence=TAS] Reactome:REACT_691 InterPro:IPR009294
            Pfam:PF06105 GO:GO:0005783 GO:GO:0005794 GO:GO:0043085
            Reactome:REACT_111102 GO:GO:0006915 GO:GO:0048011
            Pathway_Interaction_DB:p75ntrpathway GO:GO:0005887
            Pathway_Interaction_DB:ps1pathway GO:GO:0005789 GO:GO:0007219
            GO:GO:0042987 GO:GO:0004175 GO:GO:0032580 GO:GO:0006509
            GO:GO:0007220 GO:GO:0031293
            Pathway_Interaction_DB:syndecan_3_pathway GO:GO:0016485
            EMBL:AL138795 EMBL:CH471121 EMBL:AF508787 EMBL:AY113698
            EMBL:AY113699 EMBL:AF151835 EMBL:AY358951 EMBL:AK027879
            EMBL:AK075295 EMBL:AK298832 EMBL:BC001230 EMBL:BC008732
            EMBL:BC009501 EMBL:BC015568 EMBL:BC017699 EMBL:BC020590
            IPI:IPI00059964 IPI:IPI00844196 RefSeq:NP_001071096.1
            RefSeq:NP_001230700.1 RefSeq:NP_001230701.1 RefSeq:NP_057106.2
            UniGene:Hs.108408 UniGene:Hs.735911 ProteinModelPortal:Q96BI3
            IntAct:Q96BI3 STRING:Q96BI3 PhosphoSite:Q96BI3 DMDM:37077707
            PRIDE:Q96BI3 DNASU:51107 Ensembl:ENST00000360244
            Ensembl:ENST00000369109 Ensembl:ENST00000414276
            Ensembl:ENST00000581822 Ensembl:ENST00000584744 GeneID:51107
            KEGG:hsa:51107 UCSC:uc001ety.2 CTD:51107 GeneCards:GC01M150237
            HGNC:HGNC:29509 HPA:CAB037272 MIM:607629 neXtProt:NX_Q96BI3
            PharmGKB:PA142672599 eggNOG:NOG300477 HOGENOM:HOG000007541
            HOVERGEN:HBG050541 InParanoid:Q96BI3 KO:K06172 OMA:FIAFGPP
            OrthoDB:EOG4K6G55 PhylomeDB:Q96BI3 BindingDB:Q96BI3
            ChEMBL:CHEMBL2362 GenomeRNAi:51107 NextBio:53845
            ArrayExpress:Q96BI3 Bgee:Q96BI3 CleanEx:HS_APH1A
            Genevestigator:Q96BI3 GermOnline:ENSG00000117362 GO:GO:0001656
            PANTHER:PTHR12889 Uniprot:Q96BI3
        Length = 265

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 56/167 (33%), Positives = 90/167 (53%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFS 68
             FG  +++ L  + +      +KK+  GL  +S D  +  +   MAYVSGL +G IS  FS
Sbjct:    74 FGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFS 133

Query:    69 LLNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASV 128
             ++N+L    GPG +G+ G+S Y+  T++  T    LLH FW +VFF   E +    +  V
Sbjct:   134 VINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLV 193

Query:   129 VLSHIFISSYTWYMNSSGLFSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             V SH+  S  T ++N     S+L I   T+   ++A+   GGS +++
Sbjct:   194 VGSHLLTSGLT-FLNPWYEASLLPIYAVTVSMGLWAFITAGGSLRSI 239


>MGI|MGI:2385110 [details] [associations]
            symbol:Aph1a "anterior pharynx defective 1a homolog (C.
            elegans)" species:10090 "Mus musculus" [GO:0001656 "metanephros
            development" evidence=IMP] [GO:0004175 "endopeptidase activity"
            evidence=IMP;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
            "Golgi apparatus" evidence=ISO] [GO:0005887 "integral to plasma
            membrane" evidence=ISO] [GO:0006509 "membrane protein ectodomain
            proteolysis" evidence=ISO] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0007220 "Notch receptor processing"
            evidence=ISO;IMP] [GO:0008152 "metabolic process" evidence=IMP;IDA]
            [GO:0008233 "peptidase activity" evidence=ISA] [GO:0016020
            "membrane" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=ISA] [GO:0016485 "protein processing" evidence=ISO;ISA]
            [GO:0031293 "membrane protein intracellular domain proteolysis"
            evidence=ISO] [GO:0042987 "amyloid precursor protein catabolic
            process" evidence=ISO] [GO:0043085 "positive regulation of
            catalytic activity" evidence=ISO] Reactome:REACT_99130
            InterPro:IPR009294 Pfam:PF06105 MGI:MGI:2385110 GO:GO:0005783
            GO:GO:0005794 GO:GO:0043085 GO:GO:0005887 GO:GO:0005789
            GO:GO:0007219 Reactome:REACT_115202 GO:GO:0042987 GO:GO:0004175
            GO:GO:0006509 GO:GO:0007220 GO:GO:0031293 GO:GO:0016485 CTD:51107
            eggNOG:NOG300477 HOGENOM:HOG000007541 HOVERGEN:HBG050541 KO:K06172
            OMA:FIAFGPP OrthoDB:EOG4K6G55 GO:GO:0001656 PANTHER:PTHR12889
            EMBL:BC012406 EMBL:BC024111 EMBL:AK078343 IPI:IPI00127012
            IPI:IPI00896585 RefSeq:NP_666216.1 RefSeq:NP_666246.1
            UniGene:Mm.306954 ProteinModelPortal:Q8BVF7 MINT:MINT-1176936
            STRING:Q8BVF7 PRIDE:Q8BVF7 Ensembl:ENSMUST00000015894
            Ensembl:ENSMUST00000056710 GeneID:226548 KEGG:mmu:226548
            UCSC:uc008qlq.1 GeneTree:ENSGT00390000002049 InParanoid:Q8BVF7
            BindingDB:Q8BVF7 ChEMBL:CHEMBL3787 NextBio:378222 Bgee:Q8BVF7
            Genevestigator:Q8BVF7 GermOnline:ENSMUSG00000015750 Uniprot:Q8BVF7
        Length = 265

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 56/167 (33%), Positives = 90/167 (53%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFS 68
             FG  +++ L  + +      +KK+  GL  +S D  +  +   MAYVSGL +G IS  FS
Sbjct:    74 FGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFS 133

Query:    69 LLNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASV 128
             ++N+L    GPG +G+ G+S Y+  T++  T    LLH FW +VFF   E +    +  V
Sbjct:   134 VINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLV 193

Query:   129 VLSHIFISSYTWYMNSSGLFSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             V SH+  S  T ++N     S+L I   T+   ++A+   GGS +++
Sbjct:   194 VGSHLLTSGLT-FLNPWYEASLLPIYAVTVSMGLWAFITAGGSLRSI 239


>UNIPROTKB|E2R5H5 [details] [associations]
            symbol:APH1A "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043085 "positive regulation of catalytic
            activity" evidence=IEA] [GO:0042987 "amyloid precursor protein
            catabolic process" evidence=IEA] [GO:0031293 "membrane protein
            intracellular domain proteolysis" evidence=IEA] [GO:0016485
            "protein processing" evidence=IEA] [GO:0007220 "Notch receptor
            processing" evidence=IEA] [GO:0006509 "membrane protein ectodomain
            proteolysis" evidence=IEA] [GO:0005887 "integral to plasma
            membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0004175
            "endopeptidase activity" evidence=IEA] [GO:0001656 "metanephros
            development" evidence=IEA] InterPro:IPR009294 Pfam:PF06105
            GO:GO:0005783 GO:GO:0005794 GO:GO:0043085 GO:GO:0005887
            GO:GO:0042987 GO:GO:0004175 GO:GO:0006509 GO:GO:0007220
            GO:GO:0031293 GO:GO:0016485 KO:K06172 OMA:FIAFGPP GO:GO:0001656
            PANTHER:PTHR12889 GeneTree:ENSGT00390000002049 EMBL:AAEX03011047
            RefSeq:XP_003639673.1 ProteinModelPortal:E2R5H5
            Ensembl:ENSCAFT00000018712 GeneID:100855839 KEGG:cfa:100855839
            NextBio:20857618 Uniprot:E2R5H5
        Length = 265

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 56/167 (33%), Positives = 90/167 (53%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFS 68
             FG  +++ L  + +      +KK+  GL  +S D  +  +   MAYVSGL +G IS  FS
Sbjct:    74 FGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFS 133

Query:    69 LLNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASV 128
             ++N+L    GPG +G+ G+S Y+  T++  T    LLH FW +VFF   E +    +  V
Sbjct:   134 VINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLV 193

Query:   129 VLSHIFISSYTWYMNSSGLFSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             V SH+  S  T ++N     S+L I   T+   ++A+   GGS +++
Sbjct:   194 VGSHLLTSGLT-FLNPWYEASLLPIYAVTVSMGLWAFITAGGSFRSI 239


>UNIPROTKB|I3L8R2 [details] [associations]
            symbol:APH1A "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043085 "positive regulation of catalytic activity"
            evidence=IEA] [GO:0042987 "amyloid precursor protein catabolic
            process" evidence=IEA] [GO:0031293 "membrane protein intracellular
            domain proteolysis" evidence=IEA] [GO:0016485 "protein processing"
            evidence=IEA] [GO:0007220 "Notch receptor processing" evidence=IEA]
            [GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA]
            [GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
            [GO:0001656 "metanephros development" evidence=IEA]
            InterPro:IPR009294 Pfam:PF06105 GO:GO:0005783 GO:GO:0005794
            GO:GO:0043085 GO:GO:0005887 GO:GO:0042987 GO:GO:0004175
            GO:GO:0006509 GO:GO:0007220 GO:GO:0031293 GO:GO:0016485
            GO:GO:0001656 PANTHER:PTHR12889 GeneTree:ENSGT00390000002049
            Ensembl:ENSSSCT00000023376 OMA:IRQMAYX Uniprot:I3L8R2
        Length = 247

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 56/167 (33%), Positives = 90/167 (53%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVS-DRNTMDNTYAMAYVSGLGYGTISAAFS 68
             FG  +++ L  + +      +KK+  GL  +S D  +  +   MAYVSGL +G IS  FS
Sbjct:    74 FGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFS 133

Query:    69 LLNVLDQVSGPGTMGLKGESQYFGFTTSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASV 128
             ++N+L    GPG +G+ G+S Y+  T++  T    LLH FW +VFF   E +    +  V
Sbjct:   134 VINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLV 193

Query:   129 VLSHIFISSYTWYMNSSGLFSVLFIIVFTLFTAMFAYKVIGGSKKTM 175
             V SH+  S  T ++N     S+L I   T+   ++A+   GGS +++
Sbjct:   194 VGSHLLTSGLT-FLNPWYEASLLPIYAVTVSMGLWAFITAGGSFRSI 239


>UNIPROTKB|F1S090 [details] [associations]
            symbol:APH1B "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0030133 "transport vesicle" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0043085 "positive regulation
            of catalytic activity" evidence=IEA] [GO:0016485 "protein
            processing" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR009294 Pfam:PF06105 GO:GO:0016021
            GO:GO:0043085 GO:GO:0008233 GO:GO:0030133 GO:GO:0016485
            PANTHER:PTHR12889 GeneTree:ENSGT00390000002049 EMBL:CU606936
            Ensembl:ENSSSCT00000005046 OMA:PPQFFLN Uniprot:F1S090
        Length = 174

 Score = 128 (50.1 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query:    30 VKKSRGGLQYVSDRNTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKGES- 88
             +KK+  GL+ ++   T  +   +AYVSGLG+G +S  FS +N L    GPGT+G+ G+  
Sbjct:    94 LKKASEGLKSLNPDETAPSMRLLAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDPP 153

Query:    89 QYF 91
             Q+F
Sbjct:   154 QFF 156

 Score = 77 (32.2 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GC   AFGP +A+++ TI  +P++
Sbjct:     1 MTAAVFFGCAFIAFGPALALYVFTIATEPLR 31


>UNIPROTKB|E1BB58 [details] [associations]
            symbol:APH1B "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0030133 "transport vesicle" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0043085 "positive regulation
            of catalytic activity" evidence=IEA] [GO:0016485 "protein
            processing" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR009294 Pfam:PF06105 GO:GO:0016021
            GO:GO:0043085 GO:GO:0008233 GO:GO:0030133 GO:GO:0016485 KO:K06172
            PANTHER:PTHR12889 GeneTree:ENSGT00390000002049 CTD:83464
            EMBL:DAAA02028749 IPI:IPI00711392 RefSeq:NP_001178332.1
            UniGene:Bt.58697 Ensembl:ENSBTAT00000014064 GeneID:530913
            KEGG:bta:530913 OMA:LAYAFMT NextBio:20875351 Uniprot:E1BB58
        Length = 216

 Score = 128 (50.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
 Identities = 31/80 (38%), Positives = 45/80 (56%)

Query:    96 SIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVVLSHIFISSYTWYMNSSGLFSVLFIIV 155
             +  T   +LLHVFW IVFF G E K    +  V+LSH+ +S+ T      GL  VL  I+
Sbjct:   119 AFMTLVITLLHVFWGIVFFDGCEKKKWYTLLVVLLSHLLVSALTLISPHYGLNLVLAYII 178

Query:   156 FTLFTAMFAYKVIGGSKKTM 175
               L   ++A+ V GGS +++
Sbjct:   179 MVLM-GVWAFFVSGGSCRSL 197

 Score = 80 (33.2 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GC   AFGP +A+++ TI+ +P++
Sbjct:     1 MTAAVFFGCAFIAFGPALALYIFTIVTEPLR 31


>RGD|1597236 [details] [associations]
            symbol:LOC691658 "similar to anterior pharynx defective 1b
            homolog" species:10116 "Rattus norvegicus" [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016485 "protein processing"
            evidence=IEA] [GO:0043085 "positive regulation of catalytic
            activity" evidence=IEA] InterPro:IPR009294 Pfam:PF06105 RGD:1597236
            GO:GO:0016021 GO:GO:0043085 GO:GO:0016485 KO:K06172
            OrthoDB:EOG4K6G55 PANTHER:PTHR12889 GeneTree:ENSGT00390000002049
            OMA:LAYAFMT IPI:IPI00765526 RefSeq:XP_001079175.2
            Ensembl:ENSRNOT00000057704 GeneID:691658 KEGG:rno:691658
            UCSC:RGD:1597236 CTD:691658 NextBio:743520 Uniprot:D4A4J6
        Length = 216

 Score = 112 (44.5 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
 Identities = 27/81 (33%), Positives = 47/81 (58%)

Query:    96 SIFTCCFSLLHVFWSIVFFRGVEIKNRT-LVASVVLSHIFISSYTWYMNSSGLFSVLFII 154
             +  T    +LHVFW IVFF G E KN+  ++ +V+L+H+ +S+ T       +  V   I
Sbjct:   119 AFMTLVIIMLHVFWGIVFFDGCE-KNKWYILLTVLLTHLLVSTQTLLSPHYEVNLVTAYI 177

Query:   155 VFTLFTAMFAYKVIGGSKKTM 175
             +  L   ++A+ V GGS++++
Sbjct:   178 IMVLM-GIWAFCVAGGSRRSL 197

 Score = 78 (32.5 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             MT   F GC   AFGP +++++ TI  DP++
Sbjct:     1 MTAAVFFGCAFIAFGPALSLYVFTIATDPLR 31

 Score = 35 (17.4 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query:    30 VKKSRGGLQYVSDRNTMDNTYAMAY 54
             +KK+  GL+ ++   T  +   +AY
Sbjct:    94 LKKANEGLKSINPEETAPSMRLLAY 118


>WB|WBGene00000147 [details] [associations]
            symbol:aph-1 species:6239 "Caenorhabditis elegans"
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016485
            "protein processing" evidence=IEA] [GO:0043085 "positive regulation
            of catalytic activity" evidence=IEA] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0060581 "cell fate commitment
            involved in pattern specification" evidence=IMP] [GO:0048599
            "oocyte development" evidence=IMP] [GO:0060465 "pharynx
            development" evidence=IMP] [GO:0034394 "protein localization to
            cell surface" evidence=IMP] [GO:0007219 "Notch signaling pathway"
            evidence=IMP] [GO:0048598 "embryonic morphogenesis" evidence=IMP]
            [GO:0045165 "cell fate commitment" evidence=IGI] InterPro:IPR009294
            Pfam:PF06105 GO:GO:0016021 GO:GO:0009792 GO:GO:0043085
            GO:GO:0048598 GO:GO:0040011 GO:GO:0007219 GO:GO:0016485
            GO:GO:0034394 eggNOG:NOG300477 KO:K06172 PANTHER:PTHR12889
            GeneTree:ENSGT00390000002049 EMBL:AL021466 PIR:T26007
            RefSeq:NP_492469.1 ProteinModelPortal:O45876 STRING:O45876
            EnsemblMetazoa:VF36H2L.1 GeneID:172747 KEGG:cel:CELE_VF36H2L.1
            UCSC:VF36H2L.1 CTD:33467 WormBase:VF36H2L.1 InParanoid:O45876
            OMA:NKESAAQ NextBio:876845 GO:GO:0060581 GO:GO:0048599
            GO:GO:0060465 Uniprot:O45876
        Length = 308

 Score = 124 (48.7 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
 Identities = 42/138 (30%), Positives = 64/138 (46%)

Query:    50 YAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLK-----GE------SQYFGFTTSIF 98
             + +A V GLG G ISA F  +N     SGPGT+GL      GE       +Y     ++ 
Sbjct:   116 HMLALVCGLGMGVISALFYTMNAFAIFSGPGTIGLPNALKTGEIDTNRAGKYLPLCYTLS 175

Query:    99 TCCFSLLHVFWSIVFFRGVEIKNR---TLV--ASVVLSHIFISSYTWYMNSSGLFSVLFI 153
                 +L HV W+I+ +       R     V  A+ V+SH+ ++ +   +NS G   ++F 
Sbjct:   176 AILLTLFHVTWTIMVWDSCHKIGRIPSAFVPGAAAVVSHLLVT-FLSSLNSRGFHVLVFA 234

Query:   154 IVFTLFTAMFAY-KVIGG 170
             + F +     AY  VI G
Sbjct:   235 VQFLILLICIAYCNVIMG 252

 Score = 65 (27.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQDPVK 31
             M Y+  + C + +F P IA+F + I  DPV+
Sbjct:     1 MGYLLTIACYIASFSPSIALFCSFIAHDPVR 31


>UNIPROTKB|H0YLT0 [details] [associations]
            symbol:APH1B "Gamma-secretase subunit APH-1B" species:9606
            "Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016485 "protein processing" evidence=IEA] [GO:0043085
            "positive regulation of catalytic activity" evidence=IEA]
            InterPro:IPR009294 Pfam:PF06105 GO:GO:0016021 GO:GO:0043085
            GO:GO:0016485 PANTHER:PTHR12889 EMBL:AC016207 HGNC:HGNC:24080
            Ensembl:ENST00000560353 Bgee:H0YLT0 Uniprot:H0YLT0
        Length = 222

 Score = 136 (52.9 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 29/83 (34%), Positives = 50/83 (60%)

Query:    14 FGPVIAMFLTTIMQDP----VKKSRGGLQYVSDRNTMDNTYAMAYVSGLGYGTISAAFSL 69
             FG  +++++  + +      +KK+  GL+ ++   T  +   +AYVSGLG+G +S  FS 
Sbjct:    74 FGAFVSVYIQEMFRFAYYKLLKKASEGLKSINPGETAPSMRLLAYVSGLGFGIMSGVFSF 133

Query:    70 LNVLDQVSGPGTMGLKGES-QYF 91
             +N L    GPGT+G+ G+S Q+F
Sbjct:   134 VNTLSDSLGPGTVGIHGDSPQFF 156


>DICTYBASE|DDB_G0267976 [details] [associations]
            symbol:aph1 "gamma-secretase subunit Aph-1"
            species:44689 "Dictyostelium discoideum" [GO:0043085 "positive
            regulation of catalytic activity" evidence=IEA] [GO:0016485
            "protein processing" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA]
            InterPro:IPR009294 Pfam:PF06105 dictyBase:DDB_G0267976
            GO:GO:0016021 GO:GO:0043085 GenomeReviews:CM000150_GR GO:GO:0007219
            EMBL:AAFI02000003 GO:GO:0016485 eggNOG:NOG300477 PANTHER:PTHR12889
            RefSeq:XP_647460.1 EnsemblProtists:DDB0266683 GeneID:8616267
            KEGG:ddi:DDB_G0267976 OMA:SILWEST Uniprot:Q55FS3
        Length = 328

 Score = 120 (47.3 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
 Identities = 42/134 (31%), Positives = 73/134 (54%)

Query:    37 LQYVSDR-NTMDNTYAMAYVSGLGYGTISAAFSLLNVLDQVSGPGTMGLKG-ESQYFGFT 94
             L+ +S R N   ++ A+   SG+ YG I   F   ++L + +GPGT+      S      
Sbjct:   185 LETLSARPNHTLSSAAIGVGSGVAYGFIM--FG--SILWESTGPGTLFSPACPSVNLFML 240

Query:    95 TSIFTCCFSLLHVFWSIVFFRGVEIKNRTLVASVVLSHIFISSYTWYMN-----SSGLFS 149
             +SI T   +LLHV ++++ F+G   K   LVA V+++H F+++Y   +N     +S + S
Sbjct:   241 SSIITLFMTLLHVVYNVLAFQGYRSKKYHLVAFVIITH-FVTTYLTLLNLPTKTTSCVGS 299

Query:   150 VLFIIVFTLFTAMF 163
             +L I + T+F+  F
Sbjct:   300 ILPIGIITVFSVGF 313

 Score = 57 (25.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query:     1 MTYMEFLGCTMTAFGPVIAMFLTTIMQD 28
             MT + F GC    F P++A F   I ++
Sbjct:     1 MTQVLFYGCLFITFSPILAFFFMVIAKN 28


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.138   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      186       186   0.00083  110 3  11 22  0.49    31
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  25
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  146 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.52u 0.07s 17.59t   Elapsed:  00:00:08
  Total cpu time:  17.53u 0.07s 17.60t   Elapsed:  00:00:08
  Start:  Thu Aug 15 14:48:38 2013   End:  Thu Aug 15 14:48:46 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with aph-1 aph-1 aph-1 anterior pharynx defective 1	protein from Drosophila melanogaster	7.1e-34
BLAST match view associations BLAST with aph1b aph1b aph1b anterior pharynx defective 1B	gene_product from Danio rerio	3.3e-30
BLAST match view associations BLAST with Aph1b Aph1b Aph1b anterior pharynx defective 1 homolog B (C. elegans)	gene from Rattus norvegicus	6.6e-28
BLAST match view associations BLAST with zgc:114200 zgc:114200 zgc:114200	gene_product from Danio rerio	6.6e-28
BLAST match view associations BLAST with APH1B APH1B APH1B Gamma-secretase subunit APH-1B	protein from Homo sapiens	8.4e-28
BLAST match view associations BLAST with Aph1b Aph1b Aph1b anterior pharynx defective 1b homolog (C. elegans)	protein from Mus musculus	2.2e-27
BLAST match view associations BLAST with Aph1c Aph1c Aph1c anterior pharynx defective 1c homolog (C. elegans)	protein from Mus musculus	2.5e-26
BLAST match view associations BLAST with APH1A APH1A APH1A Uncharacterized protein	protein from Gallus gallus	9.1e-25
BLAST match view associations BLAST with APH1A APH1A APH1A Anterior pharynx defective 1 homolog A (C. elegans)	protein from Homo sapiens	3.8e-23
BLAST match view associations BLAST with APH1B APH1B APH1B Gamma-secretase subunit APH-1B	protein from Homo sapiens	3.0e-21
BLAST match view associations BLAST with APH1B APH1B APH1B Uncharacterized protein	protein from Canis lupus familiaris	8.0e-21
BLAST match view associations BLAST with Aph1a Aph1a Aph1a APH1A gamma secretase subunit	gene from Rattus norvegicus	9.2e-20
BLAST match view associations BLAST with APH1A APH1A APH1A Anterior pharynx defective 1 homolog A (C. elegans)	protein from Bos taurus	1.2e-19
BLAST match view associations BLAST with APH1A APH1A APH1A Gamma-secretase subunit APH-1A	protein from Homo sapiens	1.2e-19
BLAST match view associations BLAST with Aph1a Aph1a Aph1a anterior pharynx defective 1a homolog (C. elegans)	protein from Mus musculus	1.2e-19
BLAST match view associations BLAST with APH1A APH1A APH1A Anterior pharynx defective 1 homolog A	protein from Canis lupus familiaris	1.5e-19
BLAST match view associations BLAST with APH1A APH1A APH1A Uncharacterized protein	protein from Sus scrofa	1.5e-19
BLAST match view associations BLAST with LOC100624829 LOC100624829 LOC100624829 Uncharacterized protein	protein from Sus scrofa	3.5e-15
BLAST match view associations BLAST with APH1B APH1B APH1B Uncharacterized protein	protein from Bos taurus	3.5e-13
BLAST match view associations BLAST with LOC691658 LOC691658 LOC691658 similar to anterior pharynx defective 1b homolog	gene from Rattus norvegicus	3.2e-11
BLAST match view associations BLAST with aph-1 aph-1 aph-1	gene from Caenorhabditis elegans	6.7e-10
BLAST match view associations BLAST with APH1B APH1B APH1B Gamma-secretase subunit APH-1B	protein from Homo sapiens	3.2e-09
BLAST match view associations BLAST with aph1 aph1 aph1 gamma-secretase subunit Aph-1	gene from Dictyostelium discoideum	2.9e-08