Query psy9140
Match_columns 114
No_of_seqs 112 out of 422
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 20:00:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.8 6.4E-20 2.2E-24 120.8 6.9 92 7-109 13-107 (107)
2 3knb_A Titin; IG-like, titin, 99.8 1.1E-19 3.7E-24 118.1 7.1 93 6-107 4-99 (100)
3 2edj_A Roundabout homolog 2; K 99.8 2.3E-18 7.8E-23 109.6 11.2 92 7-108 8-99 (100)
4 2yuz_A Myosin-binding protein 99.8 1.3E-18 4.5E-23 112.9 8.0 89 8-111 8-99 (100)
5 2eo9_A Roundabout homolog 1; b 99.8 3.3E-18 1.1E-22 112.3 9.2 96 6-111 7-102 (118)
6 1waa_A Titin; metal binding pr 99.8 2E-18 6.7E-23 111.0 7.9 86 7-108 5-93 (93)
7 2kkq_A Myotilin; unknown funct 99.7 8E-18 2.7E-22 111.2 9.2 98 4-111 12-113 (116)
8 2kdg_A Myotilin; immonoglobuli 99.7 6.7E-18 2.3E-22 107.0 7.7 95 5-108 3-99 (100)
9 3irg_B Obscurin-like protein 1 99.7 5.9E-18 2E-22 108.5 6.9 92 7-109 13-107 (107)
10 2cqv_A MLCK, myosin light chai 99.7 2.3E-17 7.8E-22 107.6 9.7 94 6-110 6-102 (114)
11 2eny_A Obscurin; beta-sandwich 99.7 8.2E-18 2.8E-22 109.5 6.9 89 9-111 10-101 (104)
12 1u2h_A APEG-1, aortic preferen 99.7 1.3E-17 4.4E-22 105.5 7.3 91 7-107 5-98 (99)
13 2dm2_A Palladin; beta-sandwich 99.7 4.8E-17 1.7E-21 105.2 9.9 94 7-110 8-105 (110)
14 3qp3_A Titin; I-SET IG-like, s 99.7 1.5E-17 5.3E-22 106.1 7.4 91 7-108 8-101 (103)
15 3irg_A Titin; IG-like, titin, 99.7 1.3E-17 4.4E-22 105.1 6.7 93 6-107 4-99 (100)
16 1g1c_A Immunoglobulin-like dom 99.7 2.6E-17 8.8E-22 104.1 7.9 90 7-107 5-98 (99)
17 3puc_A Titin; I-SET IG-like do 99.7 2.9E-17 9.8E-22 103.7 7.6 89 8-107 7-98 (99)
18 3cx2_A Myosin-binding protein 99.7 2.8E-17 9.5E-22 106.8 7.5 94 8-107 5-108 (108)
19 4hwu_A Fibroblast growth facto 99.7 5E-17 1.7E-21 102.8 8.3 89 9-111 2-91 (95)
20 2lu7_A Obscurin-like protein 1 99.7 3E-17 1E-21 104.2 7.0 80 13-108 2-84 (84)
21 3m45_A Cell adhesion molecule 99.7 5.6E-17 1.9E-21 103.4 8.1 95 8-109 7-108 (108)
22 2dm3_A KIAA0992 protein, palla 99.7 3E-17 1E-21 105.8 6.4 96 6-110 8-105 (110)
23 2bk8_A Connectin, M1, titin he 99.7 1.3E-16 4.3E-21 101.1 8.5 89 10-109 4-96 (97)
24 2yr3_A Myosin light chain kina 99.7 3.5E-17 1.2E-21 103.9 5.9 90 6-106 10-99 (99)
25 1nct_A Titin; cell adhesion, g 99.7 2E-17 7E-22 107.6 4.7 91 6-107 13-106 (106)
26 3kvq_A Vascular endothelial gr 99.7 1.2E-16 4.2E-21 102.4 7.9 94 7-111 10-104 (108)
27 2dlt_A Myosin binding protein 99.7 1.7E-16 5.7E-21 102.4 8.2 88 7-108 8-98 (106)
28 2dm7_A KIAA1556 protein; beta- 99.7 1.4E-16 4.7E-21 102.8 7.7 87 6-109 7-96 (108)
29 3so5_A LIG-3, leucine-rich rep 99.7 3.9E-17 1.3E-21 103.9 4.9 97 7-106 10-112 (112)
30 2ckn_A Basic fibroblast growth 99.7 1.1E-16 3.7E-21 101.6 6.8 85 8-105 10-94 (95)
31 1fhg_A Telokin; immunoglobulin 99.7 1.5E-16 5E-21 109.4 7.9 95 7-112 41-139 (154)
32 1x44_A Myosin-binding protein 99.7 3.7E-16 1.3E-20 100.3 8.5 86 10-111 10-100 (103)
33 2edh_A Obscurin; structural ge 99.7 5.7E-16 1.9E-20 100.7 9.0 88 8-112 20-110 (113)
34 2k1m_A Myosin-binding protein 99.7 5.8E-16 2E-20 98.2 8.6 84 8-107 9-95 (95)
35 1wit_A Twitchin 18TH IGSF modu 99.7 1.3E-16 4.3E-21 100.6 5.5 90 6-106 1-93 (93)
36 2v9t_A Roundabout homolog 1; s 99.7 4.5E-16 1.5E-20 101.6 8.2 99 6-109 8-111 (117)
37 2edf_A Obscurin; beta-sandwich 99.7 2.7E-16 9.1E-21 100.6 6.9 90 6-111 7-99 (103)
38 2e7b_A Obscurin; IG-like domai 99.6 1.7E-15 5.7E-20 96.8 10.4 90 6-111 7-99 (103)
39 2edk_A Myosin-binding protein 99.6 1.3E-16 4.6E-21 102.1 5.0 87 7-109 8-101 (101)
40 1gxe_A Myosin binding protein 99.6 1.6E-16 5.4E-21 109.6 5.8 89 13-107 24-139 (139)
41 2edn_A Myosin-binding protein 99.6 1.5E-16 5E-21 107.9 5.1 93 9-109 14-118 (118)
42 2e7c_A Myosin-binding protein 99.6 1.3E-15 4.4E-20 99.9 9.2 84 14-109 31-117 (118)
43 1pd6_A Cardiac MYBP-C;, myosin 99.6 7.7E-16 2.6E-20 100.3 8.1 85 7-107 15-104 (104)
44 2qsq_A Carcinoembryonic antige 99.6 1.6E-15 5.5E-20 101.0 9.7 95 9-108 2-110 (111)
45 2e6q_A Obscurin-like protein 1 99.6 2.3E-15 7.9E-20 100.9 10.4 88 8-111 9-109 (112)
46 2e6p_A Obscurin-like protein 1 99.6 1E-15 3.5E-20 98.0 8.3 89 7-111 7-101 (104)
47 2lvc_A Obscurin-like protein 1 99.6 2.3E-16 7.8E-21 101.4 5.0 82 8-105 4-91 (91)
48 2yuv_A Myosin-binding protein 99.6 1.9E-15 6.5E-20 96.4 9.3 88 7-110 7-98 (100)
49 2dku_A KIAA1556 protein; beta- 99.6 3.8E-15 1.3E-19 95.1 10.6 89 7-111 8-99 (103)
50 2dav_A SLOW MYBP-C, myosin-bin 99.6 8.4E-16 2.9E-20 105.3 7.7 92 8-107 8-111 (126)
51 3s35_X Vascular endothelial gr 99.6 4.7E-16 1.6E-20 102.0 5.5 100 9-112 9-115 (122)
52 3bfo_A Mucosa-associated lymph 99.6 2.4E-15 8.4E-20 94.4 8.7 84 9-108 5-88 (91)
53 2v9r_A Roundabout homolog 1; p 99.6 1.6E-15 5.3E-20 105.6 8.5 98 6-113 110-208 (212)
54 2cr6_A KIAA1556 protein, obscu 99.6 1.2E-15 4.1E-20 100.0 7.4 89 9-112 15-107 (115)
55 2cpc_A KIAA0657 protein; immun 99.6 2.1E-15 7.3E-20 97.6 8.4 89 8-112 11-105 (113)
56 2ens_A Advanced glycosylation 99.6 1.7E-15 5.9E-20 96.0 7.7 88 6-108 9-96 (96)
57 2iep_A Muscle-specific kinase 99.6 1.9E-15 6.6E-20 103.9 8.4 92 8-109 101-192 (192)
58 3rbg_A Cytotoxic and regulator 99.6 2E-15 7E-20 100.2 8.0 94 10-110 4-104 (124)
59 2v44_A NCAM2, neural cell adhe 99.6 2.6E-15 9E-20 103.5 8.5 92 8-106 97-188 (189)
60 2cr3_A Basic fibroblast growth 99.6 2E-15 7E-20 96.5 7.0 88 10-110 6-93 (99)
61 2eo1_A OBSCN protein, cDNA FLJ 99.6 5E-15 1.7E-19 94.5 8.4 80 14-109 18-100 (102)
62 3dmk_A DOWN syndrome cell adhe 99.6 3.4E-15 1.2E-19 123.6 9.6 105 4-108 135-241 (816)
63 2yd6_A PTPRD protein; hydrolas 99.6 6E-15 2.1E-19 104.2 9.0 96 8-110 109-207 (212)
64 2v5t_A NCAM2, N-CAM 2, neural 99.6 4.9E-15 1.7E-19 101.4 7.9 97 8-111 3-99 (189)
65 2v5m_A Dscam; neurobiology SPL 99.6 1.1E-14 3.9E-19 110.0 10.6 103 6-108 102-206 (388)
66 2vr9_A Roundabout 1, ROBO; imm 99.6 8.4E-15 2.9E-19 102.9 8.8 100 4-108 105-208 (217)
67 2cry_A KIN of IRRE-like protei 99.6 1.6E-16 5.4E-21 104.9 -0.5 93 8-109 15-115 (122)
68 2yd1_A Tyrosine-protein phosph 99.6 1.2E-14 4.1E-19 102.4 9.2 92 8-109 111-202 (212)
69 3q0h_A T cell immunoreceptor w 99.6 1.5E-14 5.2E-19 95.9 9.2 96 12-111 8-112 (117)
70 2j8h_A Titin, connectin; cardi 99.6 1.4E-14 4.6E-19 100.2 9.2 95 7-111 4-102 (197)
71 3qr2_A Basigin; CD147, EMMPRIN 99.6 4E-15 1.4E-19 99.9 6.2 85 7-94 21-116 (137)
72 1epf_A NCAM, protein (neural c 99.6 5.1E-15 1.7E-19 101.9 6.9 81 8-94 101-181 (191)
73 1z9m_A GAPA225; nectin-like, I 99.6 7.1E-15 2.4E-19 99.8 7.4 98 6-110 37-141 (145)
74 2rik_A Titin; I-SET IG fold, p 99.6 7.5E-15 2.6E-19 106.8 7.9 97 5-112 3-102 (284)
75 2jll_A NCAM2, neural cell adhe 99.6 1.2E-14 4E-19 110.0 9.0 95 12-112 5-104 (389)
76 1gl4_B Basement membrane-speci 99.6 8.3E-15 2.8E-19 92.8 6.8 81 13-106 16-97 (98)
77 3lcy_A Titin; A-BAND, IG tande 99.6 1.3E-14 4.5E-19 99.6 8.3 94 7-111 7-103 (197)
78 1rhf_A Tyrosine-protein kinase 99.6 1.6E-14 5.6E-19 98.9 8.5 94 8-111 3-101 (182)
79 4fa8_A Secreted protein BARF1; 99.6 3.9E-15 1.3E-19 107.2 5.5 82 8-93 107-191 (203)
80 2c5d_C AXL oncogene, tyrosine- 99.6 1.4E-14 4.9E-19 100.4 8.2 97 7-111 2-109 (195)
81 3caf_A Fibroblast growth facto 99.5 6.7E-15 2.3E-19 93.2 5.9 83 15-105 16-99 (100)
82 1hng_A CD2; T lymphocyte adhes 99.5 4.8E-14 1.6E-18 98.4 9.9 92 15-108 4-100 (176)
83 3kld_A Contactin 4, axcam, BIG 99.5 1E-14 3.5E-19 111.8 6.7 87 8-106 296-382 (384)
84 2iep_A Muscle-specific kinase 99.5 1.5E-14 5E-19 99.5 6.8 95 8-111 8-103 (192)
85 3b5h_A Cervical EMMPRIN, HAB18 99.5 4.2E-14 1.4E-18 97.2 9.0 93 8-107 84-183 (184)
86 2nzi_A Titin; IG-domain, FNIII 99.5 2.6E-14 9E-19 104.8 8.4 95 7-111 4-102 (305)
87 2r15_A Myomesin-1; sarcomeric 99.5 3.6E-14 1.2E-18 98.9 8.5 86 12-108 122-211 (212)
88 2rik_A Titin; I-SET IG fold, p 99.5 3.3E-14 1.1E-18 103.4 8.0 89 8-107 193-284 (284)
89 3mtr_A N-CAM-1, NCAM-1, neural 99.5 2E-14 6.8E-19 101.7 6.6 93 8-110 20-115 (215)
90 2wv3_A Neuroplastin; igcam, me 99.5 1.2E-13 4.1E-18 95.5 10.3 91 8-106 93-189 (190)
91 2a38_A Titin; Z1Z2, structural 99.5 2.2E-14 7.6E-19 98.7 6.6 88 8-106 104-194 (194)
92 1h5b_A Murine T cell receptor 99.5 2.5E-13 8.7E-18 88.6 11.3 97 9-109 3-113 (113)
93 3udw_C Poliovirus receptor; PV 99.5 1E-13 3.6E-18 89.1 9.2 94 13-109 6-118 (118)
94 1epf_A NCAM, protein (neural c 99.5 7.1E-14 2.4E-18 96.1 8.9 95 9-111 4-103 (191)
95 2yd1_A Tyrosine-protein phosph 99.5 1.1E-13 3.9E-18 97.3 10.1 94 6-108 5-103 (212)
96 3laf_A Deleted in colorectal c 99.5 1.3E-14 4.3E-19 110.1 5.3 91 8-109 313-403 (403)
97 3rbs_A Myomesin-1; immunoglobu 99.5 1.5E-14 5E-19 103.9 5.3 86 8-105 118-205 (207)
98 3laf_A Deleted in colorectal c 99.5 1.1E-13 3.8E-18 104.8 10.4 101 6-112 20-125 (403)
99 3zyj_A Leucine-rich repeat-con 99.5 4.2E-14 1.4E-18 111.0 8.3 95 8-110 342-436 (440)
100 1jhl_L IGG1-kappa D11.15 FV (l 99.5 2.9E-13 1E-17 87.5 10.9 92 10-106 4-107 (108)
101 1wwb_X Protein (brain derived 99.5 5.5E-14 1.9E-18 90.9 7.3 80 20-110 14-101 (103)
102 2v44_A NCAM2, neural cell adhe 99.5 6.5E-14 2.2E-18 96.4 7.9 92 9-111 4-99 (189)
103 3khq_A B-cell antigen receptor 99.5 1.1E-13 3.7E-18 94.1 8.7 99 7-111 17-121 (133)
104 2id5_A Lingo-1, leucine rich r 99.5 2.4E-14 8.2E-19 112.7 6.1 87 12-106 390-476 (477)
105 3b43_A Titin; I-SET IG fold, e 99.5 3.3E-14 1.1E-18 114.5 6.8 94 8-112 385-481 (570)
106 2xot_A Amphoterin-induced prot 99.5 7E-14 2.4E-18 107.7 8.3 89 12-109 251-339 (361)
107 3s97_C Contactin-1; carbonic a 99.5 7.6E-14 2.6E-18 96.1 7.7 88 8-107 114-201 (201)
108 2yd9_A Receptor-type tyrosine- 99.5 2.4E-13 8.2E-18 100.2 10.5 91 6-108 5-101 (304)
109 1qz1_A Neural cell adhesion mo 99.5 8E-14 2.7E-18 101.4 7.8 97 8-111 101-197 (291)
110 2y25_A Myomesin; structural pr 99.5 1.3E-13 4.5E-18 101.2 8.9 85 13-108 228-316 (317)
111 3kld_A Contactin 4, axcam, BIG 99.5 4.8E-14 1.6E-18 108.0 6.3 92 7-107 5-100 (384)
112 3nl4_L Antigen binding fragmen 99.5 3.3E-13 1.1E-17 94.6 10.1 96 9-107 3-110 (213)
113 3r4d_A CEA-related cell adhesi 99.5 2.8E-13 9.7E-18 94.2 9.5 94 10-108 2-109 (208)
114 1vca_A VCAM-D1,2, human vascul 99.5 1.4E-13 4.7E-18 98.0 8.1 90 9-110 2-93 (202)
115 3zyi_A Leucine-rich repeat-con 99.5 3.6E-14 1.2E-18 111.7 5.5 95 8-111 353-447 (452)
116 1f97_A Junction adhesion molec 99.5 1.3E-13 4.3E-18 95.7 7.6 98 9-111 3-107 (212)
117 1he7_A High affinity nerve gro 99.5 7.6E-14 2.6E-18 95.6 6.3 79 21-110 14-102 (126)
118 1wwc_A Protein (NT-3 growth fa 99.5 5.9E-14 2E-18 91.9 5.6 93 5-110 5-104 (118)
119 2yd6_A PTPRD protein; hydrolas 99.5 1.6E-13 5.4E-18 96.8 8.2 91 6-108 5-101 (212)
120 1cs6_A Axonin-1; neural cell a 99.5 9.4E-14 3.2E-18 105.0 7.4 87 8-106 295-381 (382)
121 1qz1_A Neural cell adhesion mo 99.5 1.9E-13 6.6E-18 99.3 8.8 95 8-110 3-102 (291)
122 1hnf_A CD2; T lymphocyte adhes 99.5 2.9E-13 1E-17 96.1 9.4 93 14-108 6-105 (182)
123 4fmk_A Poliovirus receptor-rel 99.5 1.8E-13 6E-18 94.8 8.0 97 9-108 2-121 (225)
124 2x1w_L Vascular endothelial gr 99.5 5.1E-14 1.8E-18 99.9 5.3 98 9-112 106-212 (213)
125 2j8h_A Titin, connectin; cardi 99.5 5.2E-14 1.8E-18 97.3 5.1 86 11-107 108-197 (197)
126 1fnl_A Low affinity immunoglob 99.5 6E-13 2.1E-17 91.6 10.4 90 5-108 86-175 (175)
127 3r4d_A CEA-related cell adhesi 99.5 1.9E-13 6.4E-18 95.2 7.9 82 19-111 122-204 (208)
128 1eaj_A Coxsackie virus and ade 99.5 2E-13 7E-18 88.1 7.4 93 12-108 10-126 (126)
129 3jz7_A MCAR, CAR, coxsackievir 99.4 2.9E-14 9.8E-19 98.9 3.3 91 9-109 123-214 (214)
130 2if7_A SLAM family member 6; N 99.4 4.6E-13 1.6E-17 94.3 9.6 91 12-108 3-107 (193)
131 1pko_A Myelin oligodendrocyte 99.4 5.2E-13 1.8E-17 89.6 9.4 100 9-112 6-126 (139)
132 2wim_A N-CAM 2, NCAM2, neural 99.4 3.1E-13 1.1E-17 98.3 8.7 97 8-111 99-195 (291)
133 3s97_C Contactin-1; carbonic a 99.4 3.2E-13 1.1E-17 92.9 8.3 94 8-105 8-103 (201)
134 1f97_A Junction adhesion molec 99.4 1.1E-12 3.6E-17 91.0 11.0 96 9-108 106-208 (212)
135 2va4_A NCAM2, N-CAM 2, neural 99.4 1.6E-13 5.4E-18 94.1 6.6 93 8-111 3-98 (192)
136 1cs6_A Axonin-1; neural cell a 99.4 1.6E-13 5.4E-18 103.7 7.2 94 7-109 4-101 (382)
137 3mj8_L Stimulatory hamster ant 99.4 1.2E-12 4.1E-17 91.8 11.0 93 10-106 4-108 (213)
138 2a38_A Titin; Z1Z2, structural 99.4 1.4E-13 4.7E-18 94.7 6.0 91 7-106 5-98 (194)
139 1bih_A Hemolin; insect immunit 99.4 1.7E-13 5.6E-18 103.6 7.0 85 8-105 309-394 (395)
140 2o26_X MAST/stem cell growth f 99.4 4E-14 1.4E-18 103.6 3.3 98 7-109 188-290 (290)
141 2yd9_A Receptor-type tyrosine- 99.4 5.8E-13 2E-17 98.2 9.3 92 8-106 109-200 (304)
142 2v9r_A Roundabout homolog 1; p 99.4 5.4E-13 1.8E-17 92.7 8.5 98 6-108 8-110 (212)
143 2p1y_A Bispecific alpha/beta T 99.4 1.5E-12 5E-17 92.9 10.9 95 9-106 129-237 (238)
144 2wng_A Tyrosine-protein phosph 99.4 1.4E-12 4.8E-17 97.2 11.0 99 9-110 5-118 (327)
145 3p3y_A Neurofascin; IG domains 99.4 2.7E-13 9.3E-18 102.5 7.2 91 8-107 313-403 (404)
146 1ugn_A LIR1, leukocyte immunog 99.4 7.6E-13 2.6E-17 92.5 8.9 83 16-106 109-197 (198)
147 1qfw_M FV, antibody (anti beta 99.4 1.4E-12 4.9E-17 84.5 9.6 92 10-106 4-107 (108)
148 3p2t_A Leukocyte immunoglobuli 99.4 3.1E-13 1.1E-17 94.4 6.9 89 8-107 6-96 (196)
149 4fqp_A Poliovirus receptor; im 99.4 2.2E-13 7.6E-18 101.0 6.5 89 8-109 217-306 (313)
150 3umt_A SCFV heavy chain and li 99.4 7.9E-13 2.7E-17 96.0 9.0 99 7-110 138-248 (256)
151 2wv3_A Neuroplastin; igcam, me 99.4 2.2E-13 7.5E-18 94.2 5.7 89 12-112 7-96 (190)
152 2q20_A VK1 O18/O8 germline lig 99.4 8.7E-13 3E-17 85.7 8.2 92 10-106 6-109 (109)
153 2va4_A NCAM2, N-CAM 2, neural 99.4 4.7E-13 1.6E-17 91.7 7.3 96 5-106 92-192 (192)
154 2y23_A Myomesin; structural pr 99.4 2.7E-13 9.2E-18 99.3 6.5 83 14-106 228-311 (312)
155 1nbq_A JAM, junctional adhesio 99.4 2.9E-13 9.8E-18 93.7 6.2 98 9-111 6-110 (209)
156 2c5d_C AXL oncogene, tyrosine- 99.4 8.3E-13 2.8E-17 91.4 8.6 85 8-105 107-191 (195)
157 3b43_A Titin; I-SET IG fold, e 99.4 1.4E-13 4.9E-18 110.8 5.3 94 8-112 198-294 (570)
158 3jz7_A MCAR, CAR, coxsackievir 99.4 9.4E-13 3.2E-17 91.1 8.7 97 11-111 4-124 (214)
159 2wim_A N-CAM 2, NCAM2, neural 99.4 5.5E-13 1.9E-17 96.9 7.8 94 7-111 4-101 (291)
160 3r08_E T-cell surface glycopro 99.4 3.2E-13 1.1E-17 86.3 5.7 62 12-89 4-66 (82)
161 3mjg_X Beta-type platelet-deri 99.4 8.1E-13 2.8E-17 96.3 8.7 96 8-110 182-281 (289)
162 3r06_A Anti-mouse CD3epsilon a 99.4 1.3E-12 4.4E-17 91.6 9.4 92 9-105 3-106 (213)
163 3k0w_A Mucosa-associated lymph 99.4 1.8E-12 6.3E-17 92.0 10.2 85 8-108 19-103 (218)
164 1nbq_A JAM, junctional adhesio 99.4 5.6E-13 1.9E-17 92.2 7.3 94 10-107 110-209 (209)
165 2d3v_A Leukocyte immunoglobuli 99.4 3.5E-13 1.2E-17 94.3 6.4 91 8-107 6-96 (196)
166 3ux9_B SCFV antibody; five hel 99.4 8.9E-13 3E-17 95.4 8.7 100 9-109 4-115 (256)
167 1bih_A Hemolin; insect immunit 99.4 5.3E-13 1.8E-17 100.8 7.6 90 8-106 7-98 (395)
168 3o4o_C Interleukin-1 receptor 99.4 2.7E-13 9.4E-18 101.1 5.9 95 8-110 19-120 (339)
169 4gjt_B Poliovirus receptor-rel 99.4 1.1E-12 3.8E-17 87.1 8.2 94 13-109 6-119 (123)
170 3d9a_L Light chain of hyhel10 99.4 1.1E-12 3.8E-17 91.9 8.6 93 10-107 4-108 (213)
171 3bp6_B Programmed cell death 1 99.4 7.8E-13 2.7E-17 92.2 7.7 88 13-108 8-104 (202)
172 1ugn_A LIR1, leukocyte immunog 99.4 3.4E-13 1.2E-17 94.3 5.9 92 8-107 6-97 (198)
173 2vr9_A Roundabout 1, ROBO; imm 99.4 1.3E-12 4.4E-17 91.6 8.8 95 6-107 8-106 (217)
174 2v5m_A Dscam; neurobiology SPL 99.4 8E-13 2.7E-17 99.9 8.3 95 7-110 3-105 (388)
175 3sgj_C Human FCG3A receptor; r 99.4 1.4E-12 4.9E-17 92.8 9.0 85 8-111 8-92 (204)
176 3rbs_A Myomesin-1; immunoglobu 99.4 7.4E-13 2.5E-17 95.0 7.6 73 9-89 4-82 (207)
177 1oll_A NK receptor; immune sys 99.4 7.8E-13 2.7E-17 92.3 7.4 92 7-107 4-95 (188)
178 3ojm_B Fibroblast growth facto 99.4 6.2E-13 2.1E-17 93.3 6.9 94 8-108 16-113 (231)
179 3ejj_X Macrophage colony-stimu 99.4 2.9E-13 1E-17 98.3 5.4 96 7-110 186-284 (289)
180 1f2q_A High affinity immunoglo 99.4 1.5E-12 5.2E-17 89.4 8.7 92 5-110 83-174 (176)
181 4gos_A V-SET domain-containing 99.4 2E-12 7E-17 86.7 8.9 91 11-105 9-118 (125)
182 2x1w_L Vascular endothelial gr 99.4 2.1E-12 7.1E-17 91.6 9.4 86 12-107 12-101 (213)
183 1oll_A NK receptor; immune sys 99.4 9.4E-13 3.2E-17 91.9 7.5 87 9-106 101-187 (188)
184 3k0w_A Mucosa-associated lymph 99.4 1.4E-12 4.9E-17 92.5 8.5 88 8-111 119-206 (218)
185 1lk3_L 9D7 light chain; antige 99.4 1.7E-12 5.7E-17 91.2 8.7 90 13-107 6-107 (210)
186 4fa8_A Secreted protein BARF1; 99.4 5.7E-13 1.9E-17 95.8 6.4 91 15-111 1-109 (203)
187 4dkd_C Macrophage colony-stimu 99.4 1.1E-12 3.7E-17 95.4 7.9 91 9-107 91-181 (292)
188 3sgj_C Human FCG3A receptor; r 99.4 2.5E-12 8.7E-17 91.5 9.7 89 7-109 88-176 (204)
189 1moe_A Anti-CEA MAB T84.66; an 99.4 2E-12 6.8E-17 92.3 9.1 98 9-109 3-114 (240)
190 2v5t_A NCAM2, N-CAM 2, neural 99.4 5.3E-13 1.8E-17 91.2 5.8 80 16-106 107-187 (189)
191 3lcy_A Titin; A-BAND, IG tande 99.4 7.2E-13 2.5E-17 90.9 6.3 83 14-107 110-196 (197)
192 1c1e_H Catalytic antibody 1E9 99.4 3.1E-12 1.1E-16 90.3 9.7 95 12-107 5-119 (219)
193 3esu_F Antibody 14B7* light ch 99.4 2.2E-12 7.4E-17 92.8 9.0 98 8-106 132-249 (250)
194 3eow_R Poliovirus receptor; im 99.4 2.6E-13 8.8E-18 96.1 4.0 95 14-111 6-119 (221)
195 2znx_A SCFV; fluorotryptohpan, 99.4 2.4E-12 8.1E-17 93.1 9.1 96 9-109 3-110 (242)
196 3v2a_R Vascular endothelial gr 99.4 4.5E-14 1.5E-18 115.3 0.0 93 7-110 666-759 (772)
197 1i8k_A Epidermal growth factor 99.4 2E-12 6.8E-17 83.7 7.8 92 10-106 4-107 (107)
198 1f3r_B FV antibody fragment; I 99.4 4.3E-12 1.5E-16 92.4 10.5 96 12-108 5-124 (257)
199 1sy6_A T-cell surface glycopro 99.4 7E-13 2.4E-17 94.6 6.0 76 19-106 125-201 (204)
200 2fbo_J V1V2;, variable region- 99.4 4.2E-13 1.4E-17 95.6 4.8 77 14-93 143-238 (250)
201 2pet_A Lutheran blood group gl 99.4 6.7E-13 2.3E-17 93.5 5.7 93 13-109 6-116 (231)
202 2ptt_A CD48 antigen; CD244, CD 99.4 4.1E-12 1.4E-16 82.2 9.0 87 15-108 11-109 (110)
203 2oyp_A Hepatitis A virus cellu 99.4 2.5E-12 8.4E-17 82.0 7.8 88 15-106 2-107 (109)
204 1fnl_A Low affinity immunoglob 99.4 2.4E-12 8.1E-17 88.6 8.2 84 8-110 8-91 (175)
205 2gi7_A GPVI protein; IG-like d 99.4 2.7E-12 9.4E-17 89.2 8.5 82 8-107 9-90 (184)
206 3p3y_A Neurofascin; IG domains 99.4 4.2E-12 1.4E-16 95.9 10.2 89 12-106 121-210 (404)
207 3ejj_X Macrophage colony-stimu 99.4 3.5E-12 1.2E-16 92.6 9.4 90 9-107 91-181 (289)
208 1gsm_A Madcam-1, mucosal addre 99.4 2.1E-12 7.3E-17 94.9 8.3 91 8-111 6-99 (210)
209 1nqb_A Single-chain antibody f 99.4 4.1E-12 1.4E-16 93.0 9.7 99 11-110 4-123 (256)
210 2ywz_A NEW antigen receptor va 99.4 5.8E-12 2E-16 82.3 9.4 95 10-106 3-111 (111)
211 2ghw_B Anti-SARS SCFV antibody 99.4 7E-12 2.4E-16 90.0 10.7 92 10-106 138-241 (247)
212 2dru_A Chimera of CD48 antigen 99.4 3.7E-12 1.3E-16 89.4 9.0 89 14-108 6-105 (180)
213 2coq_A NEW antigen receptor va 99.4 3.4E-12 1.2E-16 82.9 8.1 95 10-106 3-108 (108)
214 1itb_B Type 1 interleukin-1 re 99.4 9.3E-13 3.2E-17 97.1 6.0 92 9-106 210-313 (315)
215 1ry7_B FGFR-3, fibroblast grow 99.4 1.7E-12 5.7E-17 96.5 7.4 89 13-110 228-330 (334)
216 1mqk_L Antibody 7E2 FV fragmen 99.3 5.1E-12 1.8E-16 83.9 9.1 96 10-109 4-111 (120)
217 3oq3_B IFN-alpha/beta binding 99.3 1.6E-12 5.6E-17 97.4 7.3 90 10-106 231-329 (329)
218 2e27_L Anti-ciguatoxin antibod 99.3 7E-12 2.4E-16 83.3 9.6 95 10-109 6-112 (119)
219 4f80_A Butyrophilin subfamily 99.3 4.8E-12 1.7E-16 89.9 9.4 83 9-92 4-107 (226)
220 1nfd_E H57 FAB; complex (immun 99.3 2.6E-12 8.7E-17 90.2 7.8 90 14-106 6-107 (212)
221 2ny1_B T-cell surface glycopro 99.3 2.2E-12 7.7E-17 88.8 7.4 80 13-110 103-182 (184)
222 3sob_L Antibody light chain; b 99.3 7E-12 2.4E-16 88.7 10.1 94 9-107 26-131 (237)
223 1ccz_A Protein (CD58); LFA-3, 99.3 3.1E-12 1.1E-16 89.2 8.1 87 14-109 2-96 (171)
224 2c1o_A IGK-C protein; FAB frag 99.3 5.2E-12 1.8E-16 91.0 9.5 97 8-107 39-150 (254)
225 1f2q_A High affinity immunoglo 99.3 2.5E-12 8.5E-17 88.4 7.4 83 8-109 5-87 (176)
226 3oq3_B IFN-alpha/beta binding 99.3 2.3E-12 7.7E-17 96.7 7.7 85 17-109 138-226 (329)
227 3s96_B 3B5H10 FAB light chain; 99.3 9.6E-12 3.3E-16 87.2 10.5 94 10-107 4-116 (218)
228 1svz_A Immunoglobulin;, single 99.3 4.4E-12 1.5E-16 91.2 8.9 97 9-108 3-114 (247)
229 2o26_X MAST/stem cell growth f 99.3 5.3E-12 1.8E-16 92.2 9.4 85 12-106 96-182 (290)
230 3rjd_A High affinity immunoglo 99.3 5E-12 1.7E-16 90.4 9.0 83 8-109 2-84 (262)
231 1rhf_A Tyrosine-protein kinase 99.3 5E-12 1.7E-16 86.4 8.6 84 8-106 99-182 (182)
232 3sbw_C Programmed cell death 1 99.3 6.3E-12 2.2E-16 88.1 9.2 93 13-110 7-118 (222)
233 3esu_F Antibody 14B7* light ch 99.3 5.8E-12 2E-16 90.5 9.2 94 10-108 7-112 (250)
234 2y25_A Myomesin; structural pr 99.3 7.9E-13 2.7E-17 96.9 4.7 79 7-92 6-85 (317)
235 1qok_A MFE-23 recombinant anti 99.3 7.5E-12 2.6E-16 92.6 10.0 100 8-108 27-147 (282)
236 1ncn_A T lymphocyte activation 99.3 1.4E-11 4.9E-16 79.4 10.2 90 16-106 3-109 (110)
237 3ry4_A Low affinity immunoglob 99.3 4.4E-12 1.5E-16 86.0 8.1 88 5-106 83-170 (170)
238 1xt5_A Variable region-contain 99.3 3.7E-12 1.3E-16 84.4 7.5 99 10-109 7-135 (135)
239 1uct_A Immunoglobulin alpha FC 99.3 3.3E-12 1.1E-16 92.0 7.8 89 10-108 109-199 (218)
240 4dzb_B Vbeta2 (MAIT T cell rec 99.3 8.6E-12 3E-16 89.4 9.7 94 9-107 3-117 (246)
241 4frw_A Poliovirus receptor-rel 99.3 4.4E-12 1.5E-16 87.3 7.9 80 13-93 5-104 (218)
242 1uct_A Immunoglobulin alpha FC 99.3 5E-12 1.7E-16 91.1 8.5 90 8-107 10-102 (218)
243 3r0n_A Poliovirus receptor-rel 99.3 2.5E-12 8.6E-17 84.9 6.3 90 13-105 8-128 (128)
244 2rcj_C Light chain; immunoglob 99.3 5.2E-12 1.8E-16 99.7 9.2 94 10-106 3-108 (523)
245 4f80_A Butyrophilin subfamily 99.3 2.9E-12 1E-16 91.0 7.1 92 8-108 119-214 (226)
246 2p1y_A Bispecific alpha/beta T 99.3 8.4E-12 2.9E-16 88.9 9.5 96 10-109 3-116 (238)
247 1f3r_B FV antibody fragment; I 99.3 4.4E-12 1.5E-16 92.4 8.1 95 10-110 142-248 (257)
248 3auv_A SC-DSFV derived from th 99.3 3.7E-12 1.3E-16 93.8 7.7 96 8-108 13-120 (276)
249 3uzq_A Anti-dengue MAB 4E11; d 99.3 8.9E-12 3.1E-16 90.2 9.6 95 10-107 4-117 (253)
250 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.3 9.8E-12 3.3E-16 90.5 9.6 97 8-107 4-116 (256)
251 2d9c_A Signal-regulatory prote 99.3 1.4E-11 4.8E-16 82.6 9.7 99 10-110 11-124 (136)
252 3o4o_C Interleukin-1 receptor 99.3 3.9E-13 1.3E-17 100.3 2.2 95 9-107 228-335 (339)
253 2ocw_A Polymeric-immunoglobuli 99.3 7.4E-12 2.5E-16 99.7 9.7 96 8-108 113-222 (585)
254 3omz_A Human vdelta1 gamma del 99.3 5E-12 1.7E-16 91.8 7.9 99 7-108 2-119 (259)
255 3bkj_L WO2 IGG2A FAB fragment 99.3 9.6E-12 3.3E-16 90.0 9.4 95 10-107 37-146 (252)
256 3juy_B 3B3 single chain varian 99.3 1.4E-11 4.8E-16 89.3 10.0 95 8-106 150-256 (256)
257 3p2t_A Leukocyte immunoglobuli 99.3 3.9E-12 1.3E-16 88.7 6.8 88 10-106 103-195 (196)
258 2ec8_A MAST/stem cell growth f 99.3 1.8E-12 6.1E-17 102.4 5.6 87 16-112 322-416 (524)
259 2zg1_A Sialic acid-binding IG- 99.3 1.2E-11 4.1E-16 86.5 9.2 98 10-108 2-123 (214)
260 4ei6_B Vbeta16 XV19 type II na 99.3 3.3E-11 1.1E-15 86.3 11.7 96 8-107 3-116 (245)
261 1q0x_L FAB 9B1, light chain; a 99.3 1E-11 3.5E-16 87.0 8.9 90 14-106 7-109 (212)
262 2ghw_B Anti-SARS SCFV antibody 99.3 8.8E-12 3E-16 89.5 8.6 96 11-108 6-120 (247)
263 1pew_A JTO2, A lambda-6 type i 99.3 2.5E-11 8.6E-16 78.7 10.0 90 13-106 6-108 (109)
264 1j05_L T84.66 antibody, anti-C 99.3 8.7E-12 3E-16 81.0 7.8 93 11-106 5-111 (111)
265 3uzq_A Anti-dengue MAB 4E11; d 99.3 4.5E-12 1.6E-16 91.8 7.0 101 8-111 134-248 (253)
266 3noi_A Natural cytotoxicity tr 99.3 9.7E-12 3.3E-16 82.1 8.0 96 10-107 10-119 (120)
267 2xzc_L FAB A.17 light chain; i 99.3 9.3E-12 3.2E-16 87.7 8.4 91 13-106 6-109 (216)
268 2j6e_L IGM, FAB light chain; a 99.3 7.3E-12 2.5E-16 88.8 7.7 94 12-106 24-129 (234)
269 1nqb_A Single-chain antibody f 99.3 1.9E-11 6.6E-16 89.4 10.1 98 10-110 124-236 (256)
270 2jll_A NCAM2, neural cell adhe 99.3 6.3E-12 2.1E-16 94.9 7.7 92 8-108 101-195 (389)
271 1i3g_L Antibody FV fragment; a 99.3 1.4E-11 4.8E-16 80.3 8.4 92 10-106 7-110 (111)
272 3qs7_E FL cytokine receptor; i 99.3 4E-12 1.4E-16 100.1 6.8 89 13-111 233-327 (423)
273 1neu_A Myelin P0 protein; stru 99.3 1.1E-11 3.6E-16 80.9 7.8 96 13-110 5-122 (124)
274 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.3 2.1E-11 7E-16 88.8 10.1 98 8-110 138-251 (256)
275 3tv3_L PGT128 light chain, IG 99.3 1.2E-11 4.2E-16 86.6 8.6 87 14-106 7-105 (211)
276 3grw_A Fibroblast growth facto 99.3 1E-11 3.5E-16 88.1 8.2 87 14-107 22-108 (241)
277 3qs9_E FL cytokine receptor; i 99.3 1.3E-12 4.3E-17 105.9 3.8 85 16-112 335-419 (527)
278 2ocw_A Polymeric-immunoglobuli 99.3 1.2E-11 4E-16 98.6 9.3 95 12-109 447-548 (585)
279 3rrq_A Protein PD-1, programme 99.3 5E-11 1.7E-15 80.1 11.1 98 10-109 4-117 (129)
280 3pl6_D MBP peptide / T-cell re 99.3 2.7E-11 9.3E-16 88.2 10.5 95 8-107 27-138 (268)
281 3ux9_B SCFV antibody; five hel 99.3 2E-11 6.7E-16 88.2 9.7 97 11-108 138-254 (256)
282 1nkr_A P58-CL42 KIR; inhibitor 99.3 8.1E-12 2.8E-16 87.8 7.5 93 9-108 10-105 (201)
283 3ry4_A Low affinity immunoglob 99.3 2.3E-11 7.8E-16 82.4 9.4 84 8-110 5-88 (170)
284 3q5y_A TCR N15 beta; IG, T cel 99.3 5.1E-11 1.7E-15 85.3 11.7 95 9-107 4-114 (240)
285 3qs7_E FL cytokine receptor; i 99.3 1.1E-11 3.6E-16 97.6 8.8 90 10-109 51-141 (423)
286 1z7z_I Intercellular adhesion 99.3 6.7E-12 2.3E-16 97.0 7.5 93 10-108 89-187 (450)
287 3nfj_J T cell receptor beta ch 99.3 1.8E-11 6.3E-16 87.8 9.3 97 8-107 2-116 (245)
288 2nzi_A Titin; IG-domain, FNIII 99.3 3.6E-12 1.2E-16 93.4 5.6 85 14-109 111-199 (305)
289 3uto_A Twitchin; kinase, muscl 99.3 7.5E-12 2.6E-16 102.9 8.0 90 6-106 481-573 (573)
290 3grw_A Fibroblast growth facto 99.3 3.8E-12 1.3E-16 90.3 5.4 89 13-111 120-222 (241)
291 4dep_C Interleukin-1 receptor 99.3 9.1E-12 3.1E-16 93.2 7.7 98 8-110 7-118 (349)
292 3gkz_A Anti-methamphetamine si 99.3 1.4E-11 4.7E-16 89.3 8.4 97 11-108 12-127 (257)
293 3nl4_H Antigen binding fragmen 99.3 2.2E-11 7.5E-16 86.0 9.2 94 12-106 4-114 (215)
294 4fom_A Poliovirus receptor-rel 99.3 5.8E-13 2E-17 98.1 1.1 91 8-110 212-303 (308)
295 1u3h_A T-cell receptor alpha-c 98.9 3.7E-13 1.3E-17 87.7 0.0 93 11-106 3-109 (110)
296 2gjj_A A21 single-chain antibo 99.3 2.3E-11 7.7E-16 89.5 9.6 98 8-108 6-119 (264)
297 1e07_A Carcinoembryonic antige 99.3 1.8E-11 6.2E-16 98.8 9.8 80 9-107 561-640 (642)
298 2ifg_A High affinity nerve gro 99.3 2.2E-12 7.7E-17 97.8 4.2 81 18-109 257-347 (347)
299 2ec8_A MAST/stem cell growth f 99.3 7.6E-12 2.6E-16 98.8 7.3 100 7-111 211-313 (524)
300 3to4_D NKT vbeta2 (mouse varia 99.3 6.4E-11 2.2E-15 86.0 11.7 93 12-107 6-116 (253)
301 2fbo_J V1V2;, variable region- 99.3 4.8E-12 1.6E-16 90.1 5.5 96 12-108 7-132 (250)
302 1nko_A Sialic acid binding IG- 99.3 3E-11 1E-15 80.5 9.1 100 8-109 6-129 (132)
303 4ffy_L DENV1-E111 single chain 99.3 2.1E-11 7.2E-16 81.3 8.3 97 10-109 4-114 (126)
304 2or8_A Hepatitis A virus cellu 99.3 2.3E-11 7.8E-16 78.7 8.2 77 13-91 3-96 (116)
305 3juy_B 3B3 single chain varian 99.3 2.7E-11 9.1E-16 87.8 9.5 101 7-108 6-134 (256)
306 3rjd_A High affinity immunoglo 99.3 3.5E-11 1.2E-15 85.9 9.9 85 10-106 174-261 (262)
307 1eeq_A Kappa-4 immunoglobulin 99.3 2.2E-11 7.6E-16 79.5 8.2 93 11-106 5-113 (114)
308 3d9a_H Heavy chain of hyhel10 99.3 1.6E-11 5.5E-16 86.3 8.0 91 12-107 5-113 (210)
309 1dr9_A B7-1 (CD80), T lymphocy 99.3 8.1E-12 2.8E-16 86.9 6.4 92 16-108 3-107 (201)
310 1op3_H FAB 2G12, heavy chain; 99.3 3.4E-11 1.2E-15 86.1 9.8 96 11-107 4-123 (225)
311 2gi7_A GPVI protein; IG-like d 99.3 4.8E-12 1.6E-16 88.0 5.1 85 10-105 97-183 (184)
312 1sq2_N Novel antigen receptor; 99.3 2.2E-11 7.4E-16 80.0 8.0 95 10-106 3-113 (113)
313 3mj6_A Junctional adhesion mol 99.3 1.9E-11 6.5E-16 88.1 8.4 97 8-106 6-121 (268)
314 1mju_H Immunoglobulin MS6-12; 99.3 2.8E-11 9.6E-16 86.9 9.2 94 11-107 4-116 (227)
315 2ifg_A High affinity nerve gro 99.3 5.6E-13 1.9E-17 101.2 0.2 94 7-110 158-252 (347)
316 3ojm_B Fibroblast growth facto 99.3 1.3E-11 4.6E-16 86.4 7.3 88 13-110 124-224 (231)
317 1ry7_B FGFR-3, fibroblast grow 99.3 5.2E-13 1.8E-17 99.2 0.0 91 6-108 7-97 (334)
318 4dkd_C Macrophage colony-stimu 99.3 2E-12 7E-17 93.9 3.0 96 7-109 186-283 (292)
319 2yz1_A Tyrosine-protein phosph 99.3 4.2E-11 1.4E-15 78.5 9.1 96 9-106 9-120 (120)
320 1c5d_H Monoclonal antibody aga 99.3 2.9E-11 9.8E-16 85.9 8.9 95 12-107 5-117 (215)
321 3bj9_1 Immunoglobulin IOTA cha 99.2 1.1E-10 3.8E-15 76.1 11.0 93 13-108 4-115 (116)
322 1pz5_B Heavy chain of FAB (SYA 99.2 5.5E-11 1.9E-15 84.1 10.3 96 11-107 4-120 (220)
323 2jju_A Signal regulatory prote 99.2 9.3E-11 3.2E-15 78.1 10.7 95 12-108 8-117 (127)
324 3kg5_A B-cell antigen receptor 99.2 1.3E-10 4.3E-15 79.5 11.6 101 6-111 17-123 (134)
325 1qok_A MFE-23 recombinant anti 99.2 3.3E-11 1.1E-15 89.1 9.2 94 10-109 165-270 (282)
326 4dep_C Interleukin-1 receptor 99.2 3.2E-11 1.1E-15 90.2 9.2 86 13-107 126-217 (349)
327 2xqy_G A13-D6.3 monoclonal ant 99.2 3.6E-11 1.2E-15 89.0 9.4 99 8-107 7-124 (261)
328 2edo_A CD48 antigen; beta-sand 99.2 3.5E-11 1.2E-15 80.1 8.4 89 16-109 13-112 (121)
329 1hxm_B Gamma-delta T-cell rece 99.2 6.7E-11 2.3E-15 85.5 10.5 99 8-107 2-123 (242)
330 1dee_B IGM RF 2A2; FAB-IBP com 99.2 3.7E-11 1.3E-15 85.9 9.0 96 11-107 4-121 (223)
331 3umt_A SCFV heavy chain and li 99.2 2.9E-11 9.9E-16 87.7 8.5 96 11-107 6-121 (256)
332 2yc1_B Single chain antibody f 99.2 5.9E-11 2E-15 82.3 9.6 97 10-111 19-127 (146)
333 2fbj_H IGA-kappa J539 FAB (hea 99.2 4.6E-11 1.6E-15 85.2 9.2 96 11-107 4-118 (220)
334 1tvd_A T cell receptor, ES204 99.2 6.9E-11 2.4E-15 77.2 9.3 94 11-106 4-115 (116)
335 2d3v_A Leukocyte immunoglobuli 99.2 7.1E-12 2.4E-16 87.6 4.8 82 16-105 108-195 (196)
336 2wbj_D OB TCR; transmembrane, 99.2 1.1E-10 3.8E-15 86.0 11.4 97 8-107 25-142 (279)
337 3bqu_C 3H6 FAB light chain; be 99.2 2.3E-12 7.7E-17 91.6 2.2 93 10-107 26-130 (233)
338 3bp6_A Programmed cell death p 99.2 2.5E-10 8.7E-15 75.1 12.0 98 10-109 2-115 (117)
339 3dmk_A DOWN syndrome cell adhe 99.2 2.1E-11 7.1E-16 101.0 8.2 97 5-111 524-621 (816)
340 3auv_A SC-DSFV derived from th 99.2 5E-11 1.7E-15 87.7 9.4 98 10-108 137-255 (276)
341 1ypz_E T cell receptor delta, 99.2 8.2E-11 2.8E-15 83.9 10.2 95 9-107 3-118 (207)
342 1moe_A Anti-CEA MAB T84.66; an 99.2 3.6E-11 1.2E-15 85.7 8.3 96 10-106 122-239 (240)
343 3u83_A Poliovirus receptor-rel 99.2 2.4E-11 8.1E-16 89.9 7.6 100 9-111 16-133 (331)
344 1x9q_A SCFV, 4M5.3 anti-fluore 99.2 2.1E-11 7.3E-16 89.2 7.2 97 9-108 17-128 (268)
345 1p6f_A NKP46, natural cytotoxi 99.2 2.3E-11 7.9E-16 89.4 7.4 91 8-107 8-98 (242)
346 3gkz_A Anti-methamphetamine si 99.2 4.2E-11 1.4E-15 86.7 8.7 97 9-109 143-251 (257)
347 1za6_B IGG heavy chain; immuno 99.2 3.1E-11 1.1E-15 91.1 8.2 92 12-107 5-115 (344)
348 1zox_A CLM-1; IG-superfamily, 99.2 4.5E-11 1.5E-15 77.5 7.9 92 13-109 7-112 (113)
349 2gki_A Nuclease; anti-DNA anti 99.2 6.6E-11 2.3E-15 88.1 9.9 98 10-110 162-275 (291)
350 3o3u_N Maltose-binding peripla 99.2 1.4E-11 4.9E-16 98.5 6.6 91 13-108 372-470 (581)
351 4fom_A Poliovirus receptor-rel 99.2 2.5E-11 8.6E-16 89.3 7.4 87 16-107 8-111 (308)
352 3vh8_G Killer cell immunoglobu 99.2 1.9E-11 6.5E-16 90.8 6.8 93 4-107 20-115 (316)
353 3mj6_A Junctional adhesion mol 99.2 2.5E-11 8.7E-16 87.5 7.3 88 13-106 124-236 (268)
354 3u83_A Poliovirus receptor-rel 99.2 5.4E-12 1.8E-16 93.4 3.8 89 9-110 233-323 (331)
355 1oga_E TRBC1, T-cell receptor 99.2 1.7E-10 5.9E-15 83.8 11.6 96 8-107 4-115 (252)
356 4hwn_A FC receptor-like A; FCR 99.2 3.3E-11 1.1E-15 78.7 7.0 90 9-110 10-102 (108)
357 2oz4_A Intercellular adhesion 99.2 8.1E-12 2.8E-16 90.7 4.4 74 14-108 192-265 (265)
358 1nkr_A P58-CL42 KIR; inhibitor 99.2 3.8E-11 1.3E-15 84.3 7.6 86 9-106 110-201 (201)
359 2atp_B T-cell surface glycopro 99.2 1.7E-10 5.7E-15 75.3 10.2 90 12-105 3-114 (115)
360 1wio_A CD4, T-cell surface gly 99.2 2.7E-11 9.3E-16 91.5 7.3 89 14-106 183-292 (363)
361 4frw_A Poliovirus receptor-rel 99.2 3.6E-11 1.2E-15 82.7 7.2 79 10-93 121-200 (218)
362 3mj8_L Stimulatory hamster ant 99.2 5E-12 1.7E-16 88.5 2.9 81 8-91 115-200 (213)
363 4i0k_A CD276 antigen; immunogl 99.2 4.2E-11 1.4E-15 84.1 7.5 85 16-110 119-209 (222)
364 2wng_A Tyrosine-protein phosph 99.2 2.3E-11 7.9E-16 90.5 6.5 81 8-94 223-309 (327)
365 1e07_A Carcinoembryonic antige 99.2 1.2E-10 4.1E-15 94.0 11.1 85 14-109 474-559 (642)
366 1p6f_A NKP46, natural cytotoxi 99.2 5.4E-11 1.9E-15 87.4 8.3 88 10-108 105-192 (242)
367 1svz_A Immunoglobulin;, single 99.2 8.9E-11 3E-15 84.3 9.3 95 11-106 131-246 (247)
368 1q9r_B S25-2 FAB (IGG1K) heavy 99.2 4.3E-11 1.5E-15 84.7 7.5 95 12-107 5-122 (222)
369 4fqp_A Poliovirus receptor; im 99.2 3.4E-11 1.2E-15 89.1 7.0 96 11-109 4-118 (313)
370 3qib_D 2B4 beta chain; IG doma 99.2 2E-10 6.9E-15 83.8 11.1 95 9-107 29-141 (270)
371 1igt_B IGG2A intact antibody - 99.2 6.8E-11 2.3E-15 91.7 8.9 96 11-107 4-118 (444)
372 1bec_A 14.3.D T cell antigen r 99.2 1.8E-10 6.2E-15 82.9 10.6 94 10-107 2-113 (238)
373 1fo0_A Protein (BM3.3 T cell r 99.2 2.4E-10 8.2E-15 74.9 10.2 94 11-106 4-115 (116)
374 1itb_B Type 1 interleukin-1 re 99.2 5.8E-11 2E-15 87.4 8.0 83 16-106 112-201 (315)
375 1qgc_4 Protein (immunoglobulin 99.2 6.9E-11 2.4E-15 90.7 8.6 95 10-107 4-112 (438)
376 1oaq_L Light chain; antibody, 99.2 1.7E-10 5.8E-15 76.0 9.3 94 13-109 6-112 (120)
377 1dlf_L Anti-dansyl immunoglobu 99.2 1.4E-10 4.7E-15 75.6 8.8 93 11-106 5-112 (113)
378 2z35_A T-cell receptor alpha-c 99.2 4.6E-10 1.6E-14 73.0 11.2 94 10-106 3-111 (112)
379 3mjg_X Beta-type platelet-deri 99.2 2.2E-11 7.6E-16 88.7 5.4 85 10-108 3-91 (289)
380 3bae_H WO2 IGG2A FAB fragment 99.2 7.7E-11 2.6E-15 84.4 8.1 95 12-107 5-125 (228)
381 2y23_A Myomesin; structural pr 99.2 6.5E-11 2.2E-15 86.5 7.7 76 7-90 106-188 (312)
382 2gki_A Nuclease; anti-DNA anti 99.2 8.9E-11 3E-15 87.4 8.5 100 7-107 22-142 (291)
383 3pv7_A B7-H6, IG-like domain-c 99.2 4.9E-11 1.7E-15 85.6 6.8 96 12-111 8-122 (248)
384 3t0v_A Immunoglobulin variable 99.2 2.5E-10 8.5E-15 76.6 9.8 100 11-111 4-115 (123)
385 3omz_A Human vdelta1 gamma del 99.2 1.4E-10 4.8E-15 84.1 9.2 99 9-109 138-252 (259)
386 2vsd_A CHIR AB1; immune system 99.2 1.7E-11 5.9E-16 79.6 3.9 90 8-108 6-97 (105)
387 1qgc_4 Protein (immunoglobulin 99.2 1E-10 3.5E-15 89.7 8.8 97 10-107 221-338 (438)
388 2r15_A Myomesin-1; sarcomeric 99.2 5.3E-11 1.8E-15 82.7 6.5 65 21-92 16-83 (212)
389 4i0k_A CD276 antigen; immunogl 99.2 4.2E-11 1.4E-15 84.1 6.0 89 15-108 3-108 (222)
390 2qhl_A Novel immune-type recep 99.2 6.2E-11 2.1E-15 77.2 6.4 88 13-105 5-111 (111)
391 1jbj_A CD3 epsilon and gamma e 99.2 8.8E-11 3E-15 82.1 7.6 61 17-93 9-70 (186)
392 3qs9_E FL cytokine receptor; i 99.2 2.2E-11 7.4E-16 98.6 5.0 88 13-110 233-326 (527)
393 2ny1_B T-cell surface glycopro 99.2 8.1E-11 2.8E-15 80.9 7.2 73 16-91 4-91 (184)
394 1z7z_I Intercellular adhesion 99.2 1.8E-11 6.2E-16 94.6 4.3 74 14-108 377-450 (450)
395 1jbj_A CD3 epsilon and gamma e 99.2 4.2E-11 1.4E-15 83.7 5.7 60 19-93 119-178 (186)
396 2znx_A SCFV; fluorotryptohpan, 99.2 1.4E-10 4.8E-15 83.7 8.6 94 10-108 125-236 (242)
397 3bp6_B Programmed cell death 1 99.1 4.2E-11 1.4E-15 83.3 5.5 78 18-108 114-194 (202)
398 2i24_N NEW antigen receptor PB 99.1 2.9E-10 1E-14 76.0 9.2 97 11-109 4-115 (121)
399 3sbw_C Programmed cell death 1 99.1 6.3E-11 2.1E-15 83.0 6.2 82 18-109 127-213 (222)
400 1lk3_L 9D7 light chain; antige 99.1 1.4E-11 4.8E-16 86.4 2.8 81 8-91 112-199 (210)
401 2or7_A T-cell immunoglobulin a 99.1 5.5E-11 1.9E-15 77.5 5.4 92 13-108 3-111 (115)
402 1qfo_A Protein (sialoadhesin); 99.1 4.8E-10 1.6E-14 73.2 10.0 94 13-107 6-118 (119)
403 3fku_X Neutralizing antibody F 99.1 1.3E-10 4.6E-15 86.0 8.2 94 13-107 6-124 (280)
404 1b6u_A KIR2DL3, P58 killer cel 99.1 8.6E-11 2.9E-15 87.3 7.1 94 8-108 8-104 (257)
405 1p4b_L Antibody variable light 99.1 2.7E-10 9.4E-15 77.6 9.0 99 8-109 6-117 (135)
406 2q87_A CMRF35-H antigen; all-b 99.1 1.4E-10 4.9E-15 74.9 7.2 94 13-109 2-108 (110)
407 3m8o_H Immunoglobulin A1 heavy 99.1 2.6E-10 8.8E-15 80.8 9.0 93 12-106 5-118 (221)
408 3liz_H 4C3 monoclonal antibody 99.1 1.4E-10 4.8E-15 84.5 7.8 94 12-106 5-118 (253)
409 3moq_A NEW antigen receptor va 99.1 2.5E-10 8.4E-15 77.2 8.4 82 10-93 3-91 (126)
410 3d9a_L Light chain of hyhel10 99.1 1.4E-11 4.9E-16 86.2 2.2 81 8-91 113-200 (213)
411 2d9q_B Granulocyte colony-stim 99.1 4.6E-11 1.6E-15 89.4 5.0 89 12-110 5-100 (313)
412 3fku_X Neutralizing antibody F 99.1 2.8E-10 9.4E-15 84.3 9.1 97 10-108 143-251 (280)
413 1x9q_A SCFV, 4M5.3 anti-fluore 99.1 3.1E-10 1.1E-14 83.0 9.3 93 11-106 155-268 (268)
414 1u9k_A Triggering receptor exp 99.1 2.1E-10 7.2E-15 75.1 7.5 94 12-106 4-114 (114)
415 1fo0_B Protein (BM3.3 T cell r 99.1 5.4E-10 1.8E-14 73.0 9.4 78 10-90 4-96 (112)
416 3tv3_L PGT128 light chain, IG 99.1 2E-11 6.7E-16 85.5 2.4 81 8-91 112-198 (211)
417 3bik_B Programmed cell death p 99.1 2.1E-09 7E-14 72.7 12.3 98 10-109 12-125 (134)
418 1a2y_B IGG1-kappa D1.3 FV (hea 99.1 6.7E-10 2.3E-14 72.7 9.3 93 12-106 5-115 (116)
419 1mfa_H IGG1-lambda Se155-4 FAB 99.1 4.9E-10 1.7E-14 73.7 8.7 96 12-108 5-119 (120)
420 2rgs_A I, IG gamma-2B heavy ch 99.1 2.4E-11 8.2E-16 86.8 2.3 82 8-92 10-100 (218)
421 2v5y_A Receptor-type tyrosine- 99.1 2.2E-10 7.6E-15 94.8 8.3 93 8-111 166-264 (731)
422 3u6r_L Antibody 1:7 (light cha 99.1 4.7E-10 1.6E-14 77.4 8.7 92 11-108 4-107 (143)
423 2h32_A Immunoglobulin IOTA cha 99.1 6.6E-10 2.3E-14 74.4 9.1 93 11-107 4-115 (126)
424 1ypz_F T-cell receptor gamma c 99.1 9E-10 3.1E-14 79.2 10.4 96 10-106 4-118 (230)
425 2vol_A Murine IGG FC; FC, zinc 99.1 2.2E-11 7.4E-16 86.2 1.8 80 11-93 6-93 (207)
426 2rcj_C Light chain; immunoglob 99.1 3.5E-10 1.2E-14 89.2 8.8 82 8-92 115-202 (523)
427 2wzp_D Camelid VHH5; baseplate 99.1 1.6E-09 5.4E-14 71.6 10.7 94 12-106 5-122 (123)
428 2c1o_A IGK-C protein; FAB frag 99.1 3.4E-11 1.2E-15 86.7 2.7 81 8-91 155-242 (254)
429 1mqk_H Antibody 7E2 FV fragmen 99.1 7.6E-10 2.6E-14 73.9 9.1 99 12-111 5-122 (127)
430 1vca_A VCAM-D1,2, human vascul 99.1 1.7E-10 5.8E-15 81.8 6.2 97 10-110 95-200 (202)
431 2xzc_L FAB A.17 light chain; i 99.1 5.6E-11 1.9E-15 83.6 3.7 79 10-91 117-202 (216)
432 1b6u_A KIR2DL3, P58 killer cel 99.1 1.4E-10 4.9E-15 86.1 6.0 89 10-110 110-204 (257)
433 1i1r_A GP130, interleukin-6 re 99.1 3.4E-10 1.1E-14 84.2 8.0 90 11-109 8-104 (303)
434 1n4x_H Immunoglobulin heavy ch 99.1 1E-09 3.5E-14 72.1 9.4 94 12-106 5-119 (120)
435 1wio_A CD4, T-cell surface gly 99.1 1.9E-10 6.5E-15 86.8 6.5 71 17-90 4-89 (363)
436 1j05_H T84.66 antibody, anti-C 99.1 8.9E-10 3E-14 72.6 9.0 95 11-106 4-120 (121)
437 3vh8_G Killer cell immunoglobu 99.1 4.6E-10 1.6E-14 83.2 8.3 91 10-107 122-215 (316)
438 2xt1_B Camelid VHH 9; viral pr 99.1 1.2E-09 4E-14 72.6 9.5 93 10-108 5-116 (121)
439 1dn0_B IGM-kappa cold agglutin 99.1 7.5E-10 2.6E-14 79.8 9.2 96 11-107 4-120 (232)
440 3bn9_D E2 FAB heavy chain; ant 99.1 9.5E-10 3.2E-14 81.4 9.9 96 11-107 4-128 (257)
441 2yc1_A Single chain antibody f 99.1 1.3E-09 4.6E-14 71.1 9.6 93 12-106 5-116 (117)
442 2otu_A FV light chain variable 99.1 1.1E-09 3.8E-14 71.5 9.2 91 13-105 7-115 (115)
443 1q0x_L FAB 9B1, light chain; a 99.1 1E-10 3.5E-15 81.9 4.4 81 8-91 116-202 (212)
444 1kxv_C Camelid VHH domain CAB1 99.1 1.7E-09 5.8E-14 71.4 9.9 94 12-106 5-120 (121)
445 2p45_B Antibody CAB-RN05; seMe 99.1 2E-09 6.7E-14 71.1 10.1 94 12-106 7-122 (123)
446 1n26_A IL-6 receptor alpha cha 99.1 5.7E-10 1.9E-14 84.2 8.4 88 10-110 9-96 (325)
447 3b5h_A Cervical EMMPRIN, HAB18 99.0 3.1E-10 1.1E-14 77.6 6.3 81 15-111 6-86 (184)
448 3b9v_A Heavy chain variable do 99.0 9.3E-10 3.2E-14 72.3 8.4 94 12-106 5-119 (120)
449 2pnd_A V-SET and immunoglobuli 99.0 9.3E-10 3.2E-14 72.3 8.3 81 9-90 3-100 (119)
450 3bqu_C 3H6 FAB light chain; be 99.0 5.3E-11 1.8E-15 84.5 2.4 80 9-91 136-222 (233)
451 2j6e_L IGM, FAB light chain; a 99.0 6.1E-11 2.1E-15 84.0 2.6 82 8-92 136-223 (234)
452 2gjj_A A21 single-chain antibo 99.0 7.9E-10 2.7E-14 81.2 8.7 94 14-108 145-259 (264)
453 3n9g_H FAB fragment of MAB CR4 99.0 1.1E-09 3.8E-14 78.5 9.3 94 12-106 5-122 (230)
454 1yc7_A Anti-VSG immunoglobulin 99.0 2.3E-09 8E-14 71.6 10.3 96 12-108 5-119 (124)
455 3s96_B 3B5H10 FAB light chain; 99.0 6.8E-11 2.3E-15 82.8 2.8 80 10-92 124-208 (218)
456 2pet_A Lutheran blood group gl 99.0 2.4E-10 8.2E-15 80.3 5.4 92 10-105 121-229 (231)
457 1dr9_A B7-1 (CD80), T lymphocy 99.0 5E-10 1.7E-14 77.7 7.0 67 20-93 119-190 (201)
458 1nfd_E H57 FAB; complex (immun 99.0 2.8E-11 9.5E-16 84.8 0.5 79 10-92 116-200 (212)
459 1q9r_B S25-2 FAB (IGG1K) heavy 99.0 3.5E-10 1.2E-14 80.0 6.2 72 17-93 137-212 (222)
460 2ol3_A BM3.3 T-cell receptor a 99.0 4.4E-09 1.5E-13 72.0 11.5 96 11-108 4-117 (142)
461 1sjv_A R9; camelids antibody, 99.0 2.8E-10 9.4E-15 74.2 5.0 90 12-105 5-112 (114)
462 2eys_A NKT15; natural killer T 99.0 3.4E-09 1.2E-13 76.8 11.2 97 8-107 4-116 (210)
463 2oi9_C V beta, T cell receptor 99.0 5.6E-09 1.9E-13 69.3 11.4 93 11-109 5-113 (121)
464 1hzh_H IGG, immunoglobulin hea 99.0 6E-10 2.1E-14 86.8 7.6 95 12-107 5-127 (457)
465 2hp4_A T-cell surface glycopro 99.0 8.5E-10 2.9E-14 72.4 7.2 80 9-90 2-99 (114)
466 2pkd_A SLAM family member 5; s 99.0 1.9E-09 6.6E-14 71.2 8.9 91 12-107 4-110 (111)
467 2zg1_A Sialic acid-binding IG- 99.0 1E-09 3.6E-14 76.5 8.0 65 19-92 135-201 (214)
468 1igy_B IGG1 intact antibody MA 99.0 2.4E-10 8.2E-15 88.5 5.2 92 12-107 4-114 (434)
469 1olz_A Semaphorin 4D; developm 99.0 5.6E-10 1.9E-14 93.9 7.5 93 13-113 539-633 (663)
470 3pv7_A B7-H6, IG-like domain-c 99.0 4.1E-10 1.4E-14 80.7 5.8 93 10-108 122-227 (248)
471 1iga_A IGA1; immunoglobulin; N 99.0 2.2E-09 7.5E-14 84.3 10.4 95 12-107 6-122 (475)
472 1hng_A CD2; T lymphocyte adhes 99.0 3E-10 1E-14 79.0 4.7 58 20-93 108-165 (176)
473 3dmm_D T-cell surface glycopro 99.0 5.9E-09 2E-13 72.0 11.0 95 10-108 4-120 (150)
474 3r06_A Anti-mouse CD3epsilon a 99.0 1.7E-10 5.9E-15 80.6 3.2 81 8-91 113-200 (213)
475 2vol_A Murine IGG FC; FC, zinc 99.0 2.4E-10 8.4E-15 80.8 4.0 81 9-92 111-196 (207)
476 1zvh_A Immunoglobulin heavy ch 99.0 1.8E-09 6.1E-14 73.1 7.9 97 12-109 5-127 (134)
477 1hxm_A Gamma-delta T-cell rece 99.0 5.2E-09 1.8E-13 76.3 10.9 98 9-107 3-119 (229)
478 1hkf_A NKP44, NK cell activati 99.0 3.4E-09 1.2E-13 70.7 9.0 82 9-91 12-107 (122)
479 3cx5_J Heavy chain (VH) of FV- 99.0 1.6E-09 5.5E-14 72.3 7.4 97 12-109 5-124 (127)
480 3tv3_H PGT128 heavy chain, IG 99.0 2.8E-09 9.5E-14 77.1 9.3 94 12-106 5-134 (239)
481 1rjc_A 1D2L19, camelid heavy c 99.0 3.8E-09 1.3E-13 71.9 9.4 97 13-110 6-131 (137)
482 2bnu_A TCR alpha chain, T-cell 99.0 3.9E-09 1.3E-13 75.6 9.8 94 11-107 4-113 (203)
483 3bdb_A Novel immune-type recep 99.0 5.7E-10 1.9E-14 75.8 5.0 92 13-109 5-115 (137)
484 1pz5_B Heavy chain of FAB (SYA 99.0 6.6E-10 2.3E-14 78.4 5.5 77 12-93 130-210 (220)
485 3mlr_H Human monoclonal anti-H 99.0 3E-09 1E-13 76.3 9.1 94 12-106 5-123 (226)
486 1sy6_A T-cell surface glycopro 99.0 1.7E-09 5.8E-14 76.9 7.7 66 20-106 16-81 (204)
487 3nl4_L Antigen binding fragmen 99.0 2.6E-10 9E-15 79.7 3.3 75 9-88 116-198 (213)
488 3d9a_H Heavy chain of hyhel10 99.0 7E-10 2.4E-14 77.8 5.5 78 12-93 123-203 (210)
489 3iu4_H CHP3 FAB heavy chain; a 99.0 2E-09 6.8E-14 79.6 8.1 94 12-106 5-121 (263)
490 3sob_L Antibody light chain; b 99.0 2.6E-10 9E-15 80.5 3.2 80 9-91 137-223 (237)
491 2wqr_A IG epsilon chain C regi 99.0 3.2E-10 1.1E-14 84.7 3.7 81 10-93 222-309 (323)
492 1lp9_E T-cell receptor alpha c 99.0 6.5E-09 2.2E-13 74.2 10.2 95 10-107 4-114 (194)
493 3q5y_A TCR N15 beta; IG, T cel 99.0 2.8E-10 9.5E-15 81.4 3.0 77 14-92 129-212 (240)
494 3sob_H Antibody heavy chain, l 98.9 3.3E-09 1.1E-13 77.3 8.7 95 11-106 27-148 (256)
495 3bkj_L WO2 IGG2A FAB fragment 98.9 1.1E-10 3.7E-15 84.4 0.7 80 9-91 152-238 (252)
496 3qhz_H Human monoclonal antibo 98.9 3.2E-09 1.1E-13 75.9 8.4 94 12-106 5-126 (232)
497 1dlf_H Anti-dansyl immunoglobu 98.9 4.6E-09 1.6E-13 69.6 8.7 97 12-109 5-123 (124)
498 2wqr_A IG epsilon chain C regi 98.9 2.1E-10 7.3E-15 85.6 2.1 78 11-91 117-201 (323)
499 1mju_H Immunoglobulin MS6-12; 98.9 7.7E-10 2.6E-14 79.3 4.4 73 17-93 131-206 (227)
500 3nfj_J T cell receptor beta ch 98.9 4.5E-10 1.5E-14 80.5 3.1 72 19-92 136-218 (245)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.80 E-value=6.4e-20 Score=120.77 Aligned_cols=92 Identities=18% Similarity=0.237 Sum_probs=76.8
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y 83 (114)
.+.|...|++..+.+|+++.|.|.+.+.+.+ .++|+||+..| ..+.||.+..+| .|.|.+++.+|+| .|
T Consensus 13 pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p--~v~W~k~g~~l-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y 84 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPP--VVVWEKGGQQL-----AASERLSFPADGAEHGLLLTAALPTDAG-VY 84 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCC--EEEEEETTEEC-----CCCSSEECCEETTEEEEEESSCCGGGCE-EE
T ss_pred CCEEEeCCCcEEEeCCCcEEEEEEEEEecCC--EEEEEECcccc-----cceeeEEEeecCceEEEEEecCChhhCE-EE
Confidence 4669999999999999999999999776555 89999999854 567899887655 6999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+|.|.|.++. .+..++|.|.+|+
T Consensus 85 ~C~a~N~~G~---~~~~~~l~V~~pP 107 (107)
T 3knb_B 85 VCRARNAAGE---AYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEETTEE---EEEEEEEEEEC--
T ss_pred EEEEEECCCE---EEEEEEEEEEcCC
Confidence 9999999764 4557899998864
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.80 E-value=1.1e-19 Score=118.08 Aligned_cols=93 Identities=15% Similarity=0.243 Sum_probs=76.9
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~ 82 (114)
+.|.|...|++..+.+|+++.|.|.+.+.+.+ .++|+||+..+ ....+.||.+..++ .|.|.+++.+|+| .
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p--~v~W~k~g~~i---~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~ 77 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTP--EVTWSCGGRKI---HSQEQGRFHIENTDDLTTLIIMDVQKQDGG-L 77 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCC--EEEEEETTEEC---CTTGGGTEEEEECSSEEEEEESSCCGGGCE-E
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCC--EEEEEECceEe---eeeccceeeeecccceEEEEEcCCCccCCE-E
Confidence 45778899999999999999999999776555 89999999875 23345789887655 6999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+|.|.|..+. .+..++|.|++
T Consensus 78 Y~C~a~N~~G~---~~~~~~l~V~~ 99 (100)
T 3knb_A 78 YTLSLGNEFGS---DSATVNIHIRS 99 (100)
T ss_dssp EEEEEEETTEE---EEEEEEEEEEC
T ss_pred EEEEEEECCCE---EEEEEEEEEEE
Confidence 99999999764 46678888874
No 3
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=2.3e-18 Score=109.65 Aligned_cols=92 Identities=23% Similarity=0.315 Sum_probs=78.9
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
.+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ...+.||.+..+|.|.|.+++.+|+| .|+|.
T Consensus 8 ~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p--~v~W~~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~ 80 (100)
T 2edj_A 8 PPIILQGPANQTLAVDGTALLKCKATGDPLP--VISWLKEGFTF----PGRDPRATIQEQGTLQIKNLRISDTG-TYTCV 80 (100)
T ss_dssp SCEEEECCCCEEEESSSEEEECCEEECSSCC--EEEEEESSSEE----SSSCSSCEECTTCCEEEESCCTTTCC-EEEEE
T ss_pred CCEEEeCcCCEEEcCCCcEEEEEEEEEcCCC--EEEEEECCEEC----CCCCCCEEEcCCCEEEEccCCcccCE-EEEEE
Confidence 4568889999999999999999999776544 79999999864 23578999999999999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEecc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|.|..+. .+..+.|.|.++
T Consensus 81 a~n~~g~---~~~~~~l~V~~~ 99 (100)
T 2edj_A 81 ATSSSGE---TSWSAVLDVTES 99 (100)
T ss_dssp EECSSCC---CBCCEEEEEESC
T ss_pred EEcCCCC---EEEEEEEEEecC
Confidence 9999764 477899999876
No 4
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=112.90 Aligned_cols=89 Identities=19% Similarity=0.248 Sum_probs=75.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
+.|...++|..+.+|++|.|.|.+ .+.+ .+.|+||+..+ ..++||.+..+| .|.|.+++.+|+| .|+
T Consensus 8 ~~~~~~~~~~~v~~G~~v~l~C~v--~p~p--~v~W~k~g~~l-----~~~~r~~i~~~~~~~~L~I~~v~~~D~G-~Y~ 77 (100)
T 2yuz_A 8 LKILTPLTDQTVNLGKEICLKCEI--SENI--PGKWTKNGLPV-----QESDRLKVVQKGRIHKLVIANALTEDEG-DYV 77 (100)
T ss_dssp CCCSBCCCCEEEETTSCCCEEEEC--SSCC--CEEEEETTEEC-----CCCSSEEEEECSSEEEEEESSCCGGGCS-EEE
T ss_pred CEEeccCCceEEcCCCCEEEEEEe--CCCC--eEEEEECCEEC-----CCCCcEEEEEeCCEEEEEECCCChhhCE-EEE
Confidence 568889999999999999999998 3333 78999999854 567899998777 6999999999996 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|.|.|. ..+..|+|.|.+|+..
T Consensus 78 C~a~N~-----~~~~~a~L~V~~~P~s 99 (100)
T 2yuz_A 78 FAPDAY-----NVTLPAKVHVISGPSS 99 (100)
T ss_dssp EEESSS-----CCCEEEEEEEECCSCC
T ss_pred EEEcCC-----CeeEEEEEEEeCCCCC
Confidence 999996 2567899999998753
No 5
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=3.3e-18 Score=112.26 Aligned_cols=96 Identities=22% Similarity=0.270 Sum_probs=80.1
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEE
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C 85 (114)
..+.|...|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ...+.||.+..+|.|.|.+++.+|+| .|+|
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p--~i~W~k~g~~~----~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C 79 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVP--TILWRKDGVLV----STQDSRIKQLENGVLQIRYAKLGDTG-RYTC 79 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCC--EEEEEESSSBC----CTTSTTEEEEETTEEEEESCCGGGCC-CEEE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCC--EEEEEECCEEC----cCCCCeEEEccCCEEEEccCCcCCCE-EEEE
Confidence 34678889999999999999999999776544 89999998854 23578999999999999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|.|..+. .+..+.|.|.++..+
T Consensus 80 ~a~n~~g~---~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 80 IASTPSGE---ATWSAYIEVQEFGVP 102 (118)
T ss_dssp EEECSSCE---EEEECCEEEECCSCC
T ss_pred EEEcCCCc---EEEEEEEEEEeCCCC
Confidence 99998764 455678999877654
No 6
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.76 E-value=2e-18 Score=111.03 Aligned_cols=86 Identities=14% Similarity=0.155 Sum_probs=71.5
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y 83 (114)
.+.|...++|..|.+|++|.|.|.+.+. + +.+.|+||+..+ ..++||.+..+| .|.|.+++.+|+| .|
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~~--~-~~v~W~k~g~~i-----~~~~~~~i~~~g~~~~L~I~~v~~~D~G-~Y 75 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSEP--D-VHGQWKLKGQPL-----AASPDCEIIEDGKKHILILHNCQLGMTG-EV 75 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESSS--S-CCCEEEETTEEC-----CCBTTEEEEEETTEEEEEECSCCGGGCE-EE
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECCC--C-CeEEEEECCEEC-----cCCCCEEEEEECCEEEEEECCCChhhCE-EE
Confidence 3568889999999999999999999542 2 278999999854 456799888776 6999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+|.|.|. +..|+|.|+++
T Consensus 76 ~C~a~n~-------~~sa~L~V~~~ 93 (93)
T 1waa_A 76 SFQAANT-------KSAANLKVKEL 93 (93)
T ss_dssp EEEETTE-------EEEEEEEEECC
T ss_pred EEEECCC-------cEEEEEEEEcC
Confidence 9999984 34789999875
No 7
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.74 E-value=8e-18 Score=111.16 Aligned_cols=98 Identities=17% Similarity=0.213 Sum_probs=80.6
Q ss_pred eccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC----cEEEeecCCCCC
Q psy9140 4 GDMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG----ALHIRDTGMEDS 79 (114)
Q Consensus 4 avv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G----~L~I~~v~~~D~ 79 (114)
+...+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ...+.||.+..++ .|.|.+++.+|+
T Consensus 12 ~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p--~v~W~k~~~~~----~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 85 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPP--KLFWKRNNEMV----QFNTDRISLYQDNTGRVTLLIKDVNKKDA 85 (116)
T ss_dssp CCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCC--EEEEEETTEEC----CCCBTTEEEEECTTCEEEEEEEEECGGGC
T ss_pred CCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCC--EEEEEECCEEC----cCCCCeEEEEeCCCCeEEEEECCCCcccC
Confidence 3456789999999999999999999999876554 89999999864 2246789887654 799999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
| .|+|.|.|..+. .+..+.|.|.+++..
T Consensus 86 G-~Y~C~a~N~~G~---~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 86 G-WYTVSAVNEAGV---TTCNTRLDVTARPNQ 113 (116)
T ss_dssp E-EEEEEEEETTEE---EEEEEEEEEECCSCC
T ss_pred E-EEEEEEEcCCCe---EEEEEEEEEeCCCCC
Confidence 5 999999998754 466889999977653
No 8
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.74 E-value=6.7e-18 Score=107.04 Aligned_cols=95 Identities=12% Similarity=0.135 Sum_probs=74.9
Q ss_pred ccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC--cEEEeecCCCCCCee
Q psy9140 5 DMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG--ALHIRDTGMEDSYIR 82 (114)
Q Consensus 5 vv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G--~L~I~~v~~~D~gg~ 82 (114)
...+.|...|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ......++....+| .|.|.+++.+|+| .
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p--~v~W~~~g~~~---~~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~ 76 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAP--DVSWYLNGRTV---QSDDLHKMIVSEKGLHSLIFEVVRASDAG-A 76 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECEEESCC--EEEEEETTEEE---CCCSSSCEEEETTTEEEEEESSCCGGGCE-E
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCC--EEEEEECCEEC---cCCCcEEEEEcCCCeEEEEECCCCcccCE-E
Confidence 455778889999999999999999999765444 89999999864 12223355555566 8999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|+|.|.|..+. .+..+.|.|.+.
T Consensus 77 Y~C~a~n~~g~---~~~~~~l~V~~~ 99 (100)
T 2kdg_A 77 YACVAKNRAGE---ATFTVQLDVLAK 99 (100)
T ss_dssp EEEEEEETTEE---EEEEEEEEEECC
T ss_pred EEEEEEcCCCe---EEEEEEEEEEec
Confidence 99999998754 566888888764
No 9
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.73 E-value=5.9e-18 Score=108.50 Aligned_cols=92 Identities=18% Similarity=0.237 Sum_probs=76.5
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y 83 (114)
.+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ..+.||.+..+| .|.|.+++.+|+| .|
T Consensus 13 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~i~W~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y 84 (107)
T 3irg_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPP--VVVWEKGGQQL-----AASERLSFPADGAEHGLLLTAALPTDAG-VY 84 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCC--EEEEEETTEEC-----CCCSSEECCEETTEEEEEESSCCGGGCE-EE
T ss_pred CCeeEcCCccEEEeCCCeEEEEEEEeecCCC--EEEEEECCeEC-----CCCCcEEEEeCCCEEEEEEccCCHHhCE-EE
Confidence 4668889999999999999999999765444 89999999853 457899998888 8999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+|.|.|..+. .+..+.|.|.+++
T Consensus 85 ~C~a~n~~g~---~~~~~~l~V~~~P 107 (107)
T 3irg_B 85 VCRARNAAGE---AYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEETTEE---EEEEEEEEEEC--
T ss_pred EEEEEcCCCc---EEEEEEEEEEcCC
Confidence 9999998754 4567899998763
No 10
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=2.3e-17 Score=107.59 Aligned_cols=94 Identities=12% Similarity=0.066 Sum_probs=77.3
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc---CCcEEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT---AGALHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~---~G~L~I~~v~~~D~gg~ 82 (114)
..+.|...|++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ ..+.||.+.. ++.|.|.+++.+|+| .
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p--~i~W~k~~~~~-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~ 77 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPI--TCTWMKFRKQI-----QESEHMKVENSENGSKLTILAARQEHCG-C 77 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSC--EEEEEESSSBC-----CCSSSEEEEECSSEEEEEETTCCTTTCE-E
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCC--EEEEEECCEEC-----cCCCCEEEEEcCCEEEEEECCCChhcCE-E
Confidence 45678889999999999999999999775444 89999999853 4566888764 457999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|+|.|.|..+. .+..+.|.|.+++.
T Consensus 78 Y~C~a~N~~g~---~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 78 YTLLVENKLGS---RQAQVNLTVVDKPD 102 (114)
T ss_dssp EEEEEECSSCE---EECCEEEEEECSCS
T ss_pred EEEEEEECCCc---EEEEEEEEEECCCC
Confidence 99999998763 56688999986554
No 11
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=8.2e-18 Score=109.48 Aligned_cols=89 Identities=18% Similarity=0.249 Sum_probs=73.2
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~C 85 (114)
.|...+++..+.+|++|.|.|.+.+.+.++ .+.|+||+..+ ..++||.+..+| .|.|.+++.+|+| .|+|
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~-~v~W~k~g~~i-----~~~~r~~~~~~~~~~~L~I~~v~~~D~G-~Y~C 82 (104)
T 2eny_A 10 GITKRLKTMEVLEGESCSFECVLSHESASD-PAMWTVGGKTV-----GSSSRFQATRQGRKYILVVREAAPSDAG-EVVF 82 (104)
T ss_dssp CCSBCCCCEEEESSCCEEEEEECSSCCCSS-CBCCBSSSSBC-----SBCSSCEEEEETTEEEEEECSCCTTTCS-CEEE
T ss_pred EEEecCCCcEEcCCCcEEEEEEEcCCCCCc-eeEEEECCEEC-----CCCCCEEEEEcCCEEEEEECCCCHHHCE-EEEE
Confidence 478889999999999999999996643322 68999999854 456799887766 6999999999996 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|.|. +..|+|.|++++..
T Consensus 83 ~a~~~-------~~~a~L~V~~~p~~ 101 (104)
T 2eny_A 83 SVRGL-------TSKASLIVRERSGP 101 (104)
T ss_dssp EETTE-------EEEECEEEECCCSS
T ss_pred EECCe-------eEEEEEEEeCCCcC
Confidence 99763 45789999988754
No 12
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=105.54 Aligned_cols=91 Identities=14% Similarity=0.271 Sum_probs=74.1
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y 83 (114)
.+.|...|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ...+.||.+..+| .|.|.+++.+|+| .|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~k~~~~~----~~~~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y 77 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPKP--VVSWLRNRQPV----RPDQRRFAEEAEGGLCRLRILAAERGDAG-FY 77 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCC--EEEEEETTEEC----CCBTTEEEEECGGGEEEEEESSCCGGGCE-EE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcCCC--EEEEEECCEEC----CCCCCEEEEECCCCEEEEEEccCCcCCCE-EE
Confidence 4678889999999999999999999765444 89999999864 2345677776666 5999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEec
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+|.|.|..+. .+..+.|.|++
T Consensus 78 ~C~a~N~~g~---~~~~~~l~V~~ 98 (99)
T 1u2h_A 78 TCKAVNEYGA---RQCEARLEVRG 98 (99)
T ss_dssp EEEEEETTEE---EEEEEEEEEEC
T ss_pred EEEEEECCCc---eeEEEEEEEEC
Confidence 9999998754 45577888875
No 13
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=4.8e-17 Score=105.23 Aligned_cols=94 Identities=18% Similarity=0.361 Sum_probs=76.8
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc--CC--cEEEeecCCCCCCee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT--AG--ALHIRDTGMEDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~--~G--~L~I~~v~~~D~gg~ 82 (114)
.+.|...|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ...+.||.+.. +| .|.|.+++.+|+| .
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~k~g~~~----~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~ 80 (110)
T 2dm2_A 8 APFFEMKLKHYKIFEGMPVTFTCRVAGNPKP--KIYWFKDGKQI----SPKSDHYTIQRDLDGTCSLHTTASTLDDDG-N 80 (110)
T ss_dssp CCCBSSCCCCEEEETTCCEEEEEEBCCSSCC--EEEEECSSCBC----CTTCSSEEEEECTTCEEEEEESSCCTTTCS-C
T ss_pred CCEEEecCcCeEEeCCCeEEEEEEEEecCCC--EEEEEECCEEC----CCCCCeEEEEECCCcEEEEEECCCChhhCE-E
Confidence 4668889999999999999999999876544 89999998854 22357888764 45 5999999999996 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|+|.|.|..+. .+..+.|.|.++..
T Consensus 81 Y~C~a~N~~g~---~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 81 YTIMAANPQGR---ISCTGRLMVQAVNS 105 (110)
T ss_dssp CEEEEECTTCC---EEECCCEEEECCSC
T ss_pred EEEEEEECCCe---EEEEEEEEEECCCC
Confidence 99999999865 46678899987654
No 14
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=106.07 Aligned_cols=91 Identities=18% Similarity=0.178 Sum_probs=75.4
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y 83 (114)
.+.|...+++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ ..+.||.+..++ .|.|.+++.+|+| .|
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~i~W~k~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y 79 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNVQSKPTA--EVKWYHNGVEL-----QESSKIHYTNTSGVLTLEILDCHTDDSG-TY 79 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCC--EEEEEETTEEC-----CCCSSEEEEEETTEEEEEECSCCGGGCE-EE
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEEEecCCC--EEEEEECCEEC-----CCCCCEEEEECCCEEEEEEcCCCcccCE-EE
Confidence 3668899999999999999999999776544 89999999854 456788887544 5999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+|.|.|..+. .+..+.|.|+..
T Consensus 80 ~C~a~N~~G~---~~~~~~l~V~~~ 101 (103)
T 3qp3_A 80 RAVCTNYKGE---ASDYATLDVTGG 101 (103)
T ss_dssp EEEEEETTEE---EEEEEEEEEECC
T ss_pred EEEEEeCCCc---EEEEEEEEEECC
Confidence 9999998764 566889998864
No 15
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.72 E-value=1.3e-17 Score=105.11 Aligned_cols=93 Identities=15% Similarity=0.238 Sum_probs=75.3
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC---CcEEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA---GALHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~---G~L~I~~v~~~D~gg~ 82 (114)
+.+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ....++||.+..+ +.|.|.+++.+|+| .
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p--~v~W~~~~~~~---~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~ 77 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTP--EVTWSCGGRKI---HSQEQGRFHIENTDDLTTLIIMDVQKQDGG-L 77 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCC--EEEEEETTEEC---CTTGGGTEEEEECSSEEEEEESSCCGGGCE-E
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCC--ceEEEECCEEe---ecCCCCEEEEEecCCEEEEEEeecCcccCE-E
Confidence 45678888999999999999999999765444 89999999864 2235679998865 67999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+|.|.|..+. .+..+.|.|+.
T Consensus 78 Y~C~a~n~~g~---~~~~~~l~V~~ 99 (100)
T 3irg_A 78 YTLSLGNEFGS---DSATVNIHIRS 99 (100)
T ss_dssp EEEEEEETTEE---EEEEEEEEEEC
T ss_pred EEEEEEeCCCc---EEEEEEEEEEe
Confidence 99999998754 45577777753
No 16
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.71 E-value=2.6e-17 Score=104.15 Aligned_cols=90 Identities=18% Similarity=0.159 Sum_probs=72.1
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc--cCC--cEEEeecCCCCCCee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT--TAG--ALHIRDTGMEDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~--~~G--~L~I~~v~~~D~gg~ 82 (114)
.+.|...|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ..+.|+.+. .++ .|.|.+++.+|+| .
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~k~g~~~-----~~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~ 76 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDP--ECEWYKNGVKI-----ERSDRIYWYWPEDNVCELVIRDVTGEDSA-S 76 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCC--EEEEEETTEEC-----CCCSSEEEEEEETTEEEEEECSCCGGGCE-E
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCCC--EEEEEECCEEC-----CCCCCEEEEEcCCCEEEEEECCCCcCCCE-E
Confidence 4678889999999999999999999765444 89999999854 345566543 233 7999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+|.|.|..+. .+..+.|.|..
T Consensus 77 Y~C~a~N~~g~---~~~~~~l~V~~ 98 (99)
T 1g1c_A 77 IMVKAINIAGE---TSSHAFLLVQA 98 (99)
T ss_dssp EEEEEEETTEE---EEEEEEEEEEC
T ss_pred EEEEEEECCCc---EEEEEEEEEec
Confidence 99999998754 45577888875
No 17
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.71 E-value=2.9e-17 Score=103.72 Aligned_cols=89 Identities=18% Similarity=0.315 Sum_probs=73.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ..+.||.+..++ .|.|.+++.+|+| .|+
T Consensus 7 P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p--~v~W~~~g~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~ 78 (99)
T 3puc_A 7 PVIVTGLQDTTVSSDSVAKFAVKATGEPRP--TAIWTKDGKAI-----TQGGKYKLSEDKGGFFLEIHKTDTSDSG-LYT 78 (99)
T ss_dssp EEEEECCCCEEEESSSCEEEEEEEEEESCC--EEEEEETTEEC-----CSSSSEEEEEETTEEEEEECSCCGGGCE-EEE
T ss_pred CEEEecCccEEEeCCCcEEEEEEEEecCCC--EEEEEECCEEC-----cCCCCEEEEEeCCEEEEEECCCCcccCE-EEE
Confidence 568888999999999999999999765444 89999999853 456899887655 6999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEec
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|.|.++. .+..+.|.|+.
T Consensus 79 C~a~n~~g~---~~~~~~l~V~~ 98 (99)
T 3puc_A 79 CTVKNSAGS---VSSSCKLTIKA 98 (99)
T ss_dssp EEEEETTEE---EEEEEEEEEEC
T ss_pred EEEEeCCCc---EeEEEEEEEEe
Confidence 999998764 46677888763
No 18
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.71 E-value=2.8e-17 Score=106.78 Aligned_cols=94 Identities=14% Similarity=0.145 Sum_probs=70.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCc-ceEEEeeCCeeeeeeeeccCCcEEEc---------cCCcEEEeecCCC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNL-LLIAWLREGVSEARSIIHSGGRYSIT---------TAGALHIRDTGME 77 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~-~~vsW~kd~~~~~~~~~~~~~r~~v~---------~~G~L~I~~v~~~ 77 (114)
+.|...|++..|.+|.+|.|.|.+.+.+.+. +.|.|+|++.... ....+.||.+. .++.|.|.+|+.+
T Consensus 5 p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 5 GLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDL--SSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEG--GGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred cEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccc--cccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 5688899999999999999999997665411 2899999873211 11234577653 2478999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+| .|+|.|.|..+. .+..++|.|.+
T Consensus 83 D~G-~Y~C~a~N~~G~---~~~~~~L~V~~ 108 (108)
T 3cx2_A 83 FTG-SYRCEVSTKDKF---DCSNFNLTVHE 108 (108)
T ss_dssp GCE-EEEEEEECSSCE---EEEEEEEEEEC
T ss_pred cCE-EEEEEEecCCCc---eEEEEEEEEeC
Confidence 995 999999998764 56688888864
No 19
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.70 E-value=5e-17 Score=102.83 Aligned_cols=89 Identities=24% Similarity=0.319 Sum_probs=68.9
Q ss_pred ceee-ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 9 DYEI-NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 9 ~~~v-~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+|.+ .|++..+.+|.++.|.|.+.+ .+ .+.|+|++..+ ..+.|+.+. ++.|.|.+++.+|+| .|+|.|
T Consensus 2 ~~~~~~p~~~~v~~G~~~~l~C~~~~--~p--~v~W~k~g~~~-----~~~~~~~~~-~~~L~i~~~~~~D~G-~Y~C~a 70 (95)
T 4hwu_A 2 DYGGSQPEAYVVAPGESLELQCMLKD--AA--VISWTKDGVHL-----GPNNRTVLI-GEYLQIKGATPRDSG-LYACTA 70 (95)
T ss_dssp ------CEEEEECTTSCEEEECCCCT--TC--EEEEEETTEEE-----CCCSSEEEE-TTEEEECSCCGGGCE-EEEEEE
T ss_pred cccccCCCcEEECCCCEEEEEEEeCC--CC--EEEEEECCEEC-----CCCceEEEe-CCEEEECcCCcccCE-EEEEEE
Confidence 4444 788899999999999999865 23 79999999853 456788775 789999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|..+. .+..+.|.|.++...
T Consensus 71 ~n~~g~---~~~~~~l~V~~~~~~ 91 (95)
T 4hwu_A 71 ARTVDS---ETWIFMVNVTDAAEN 91 (95)
T ss_dssp ECSSCE---EEEEEEEEECCC---
T ss_pred ccCCCc---EEEEEEEEEeCCccc
Confidence 998763 466889999988654
No 20
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.70 E-value=3e-17 Score=104.16 Aligned_cols=80 Identities=21% Similarity=0.316 Sum_probs=65.0
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeEEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYYCQTTH 89 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~C~a~n 89 (114)
+..+..+.+|+++.|.|.+.+ +.+ .|.|+||+..| ..++||.+..+| .|.|.+++.+|+| .|+|.|.|
T Consensus 2 ~lt~v~~~~G~~v~l~C~vs~-p~p--~v~W~k~g~~l-----~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~Y~C~a~n 72 (84)
T 2lu7_A 2 HMTRVRSTPGGDLELVVHLSG-PGG--PVRWYKDGERL-----ASQGRVQLEQAGARQVLRVQGARSGDAG-EYLCDAPQ 72 (84)
T ss_dssp -CCCEEECTTSCEEEECCCSC-CST--TCEEEETTEEC-----CCCSSEEEEECSSCEEEEESSCSSTTCE-EEEEECTT
T ss_pred CCeEEEEecCCCEEEEEEECC-CCc--EEEEEECCEEc-----cccccEEEeecCCeEEEEecCCCCcccE-EEEEEECC
Confidence 456788999999999999843 333 68999999864 567888887766 5999999999995 99999976
Q ss_pred ccCCcEEeCCCeEEEEecc
Q psy9140 90 KLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~~~ 108 (114)
. +..++|.|++|
T Consensus 73 ~-------~~~a~l~V~eP 84 (84)
T 2lu7_A 73 D-------SRIFLVSVEEP 84 (84)
T ss_dssp T-------CEEEEEEECCC
T ss_pred E-------EEEEEEEEECC
Confidence 2 45789999987
No 21
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.70 E-value=5.6e-17 Score=103.43 Aligned_cols=95 Identities=15% Similarity=0.240 Sum_probs=73.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee---eeccCCcEEEc----cCCcEEEeecCCCCCC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS---IIHSGGRYSIT----TAGALHIRDTGMEDSY 80 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~---~~~~~~r~~v~----~~G~L~I~~v~~~D~g 80 (114)
+.|...|++..+.+|.+|.|.|.+.+.+.+ .+.|+|++..++.. ....++||.+. .++.|.|.+|+.+|+|
T Consensus 7 p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 7 QGQFPLTQNVTVVEGGTAILTCRVDQNDNT--SLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEG 84 (108)
T ss_dssp -CCCEECCCEEEETTSCEEEEEEESSCSSC--CEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCE
T ss_pred CCccccCCeeEEEeCCcEEEEeEEcCCCcc--EEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCe
Confidence 568899999999999999999999765433 78999988632211 12245699875 3668999999999995
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|+|.|.| .+. .+..+.|.|.+++
T Consensus 85 -~Y~C~~~n-~~~---~~~~~~L~V~~~P 108 (108)
T 3m45_A 85 -QYTCSLFT-MPV---KTSKAYLTVLGVP 108 (108)
T ss_dssp -EEEEEECS-SSC---EEEEEEEEEECCC
T ss_pred -EEEEEEEc-CCC---cEEEEEEEEEcCC
Confidence 99999999 543 4667899998764
No 22
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=3e-17 Score=105.82 Aligned_cols=96 Identities=17% Similarity=0.291 Sum_probs=74.9
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC--cEEEeecCCCCCCeee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG--ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G--~L~I~~v~~~D~gg~Y 83 (114)
..+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+. .....++....+| .|.|.+++.+|+| .|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~~~g~~~~---~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y 81 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTP--DLSWQLDGKPVR---PDSAHKMLVRENGVHSLIIEPVTSRDAG-IY 81 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCC--EEECBBSSSBCC---CCSSEEEEECTTSCEEEEESSCCGGGCS-BB
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCC--EEEEEECCEECC---CCCceEEEEecCCeEEEEEeeCCcccCE-EE
Confidence 45778899999999999999999999776544 899999998641 1112233344444 8999999999996 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
+|.|.|..+. .+..+.|.|.++..
T Consensus 82 ~C~a~n~~g~---~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 82 TCIATNRAGQ---NSFSLELVVAAKES 105 (110)
T ss_dssp CEEEECSSCE---EEECCEEEEECCCC
T ss_pred EEEEECCCCE---EEEEEEEEEeCCCC
Confidence 9999998754 56688999987654
No 23
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=101.13 Aligned_cols=89 Identities=18% Similarity=0.281 Sum_probs=72.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCC-CCCcceEEEeeCCeeeeeeeeccCCcEEEc-cCC--cEEEeecCCCCCCeeeEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAY-NHNLLLIAWLREGVSEARSIIHSGGRYSIT-TAG--ALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~-~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-~~G--~L~I~~v~~~D~gg~Y~C 85 (114)
+...|++..+.+|.++.|.|.+.++ +.+ .+.|+|++..+ ..+.||.+. .+| .|.|.+++.+|+| .|+|
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~--~v~W~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C 75 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQST--QVTWYFGVRQL-----ENSEKYEITYEDGVAILYVKDITKLDDG-TYRC 75 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTC--EEEEEETTEEC-----CSSSSEEEEEETTEEEEEECSCCGGGCE-EEEE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCC--EEEEEECCEEC-----cCCCCEEEEEcCCeEEEEEecCChhhCe-EEEE
Confidence 4567889999999999999999765 333 89999999853 456788873 466 8999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEeccc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.|..+. .+..+.|.|++..
T Consensus 76 ~a~n~~g~---~~~~~~l~V~~~~ 96 (97)
T 2bk8_A 76 KVVNDYGE---DSSYAELFVKGVR 96 (97)
T ss_dssp EEECSSCE---EEEEEEEEETTTC
T ss_pred EEECCCCe---EeEEEEEEEEecC
Confidence 99998764 4557889988643
No 24
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=3.5e-17 Score=103.88 Aligned_cols=90 Identities=24% Similarity=0.332 Sum_probs=70.8
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEE
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C 85 (114)
..|.|...|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ..+.++....++.|.|.+++.+|+| .|+|
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~~~g~~~-----~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C 81 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVP--RITWLLNGQPI-----QYARSTCEAGVAELHIQDALPEDHG-TYTC 81 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCC--CCEEEESSSBC-----SSCCCEEETTEEEEEECSCCTTCCB-CEEE
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEEeeeCCC--eEEEEECCEEC-----cccceEeeCCeEEEEECCCChhhCE-EEEE
Confidence 34678889999999999999999999766544 78999999854 2334444444568999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEe
Q psy9140 86 QTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|.|..+. .+..+.|.|+
T Consensus 82 ~a~N~~g~---~~~~~~l~V~ 99 (99)
T 2yr3_A 82 LAENALGQ---VSCSAWVTVH 99 (99)
T ss_dssp EEECSSCE---EEEECCEEEC
T ss_pred EEEECCCe---EEEEEEEEEC
Confidence 99999764 4556677664
No 25
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.68 E-value=2e-17 Score=107.60 Aligned_cols=91 Identities=15% Similarity=0.245 Sum_probs=75.3
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc---CCcEEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT---AGALHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~---~G~L~I~~v~~~D~gg~ 82 (114)
..+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ..+.||.+.. ++.|.|.+++.+|+| .
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p--~v~W~k~g~~l-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~ 84 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVP--TVTWLRKGQVL-----STSARHQVTTTKYKSTFEISSVQASDEG-N 84 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCC--BCCBCSSSSCC-----TTCSSEEEEECSSEEEEEECCCCSSCCS-E
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCC--EEEEEECCEEC-----CCCCCEEEEECCCEEEEEECcCCchhCE-E
Confidence 45678899999999999999999999776554 79999999853 4577888865 468999999999996 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+|.|.|..+. .+..+.|.|++
T Consensus 85 Y~C~a~N~~G~---~~~~~~l~V~~ 106 (106)
T 1nct_A 85 YSVVVENSEGK---QEAEFTLTIQK 106 (106)
T ss_dssp EEECCBCSSCB---CCEEEEEEECC
T ss_pred EEEEEEeCCCe---EEEEEEEEEEC
Confidence 99999999764 45677888753
No 26
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.68 E-value=1.2e-16 Score=102.40 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=67.5
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc-cCCcEEEeecCCCCCCeeeEE
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT-TAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-~~G~L~I~~v~~~D~gg~Y~C 85 (114)
.+.|...+.+..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ..+.++.+. .++.|.|.+++.+|+| .|+|
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~i~W~~~~~~~-----~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C 81 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPPP--QIMWFKDNETL-----VEDSGIVLKDGNRNLTIRRVRKEDEG-LYTC 81 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC----C--CEEEEESSSBC-----CCBTTEEEETTTTEEEECSCCGGGCE-EEEE
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCCC--eEEEEECCeEc-----ccCCCeEEeCCCcEEEEeecCcccCE-EEEE
Confidence 4668889999999999999999999775444 79999999854 334555554 4679999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|.|..+. .+..+.|.|..+...
T Consensus 82 ~a~n~~g~---~~~~~~l~V~~~~~~ 104 (108)
T 3kvq_A 82 QACSVLGC---AKVEAFFIIEGAQEK 104 (108)
T ss_dssp EEC----C---EEEEEEEEEEC----
T ss_pred EEEeCCCc---eEEEEEEEEeCCCcc
Confidence 99999765 455689999877653
No 27
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=1.7e-16 Score=102.40 Aligned_cols=88 Identities=22% Similarity=0.304 Sum_probs=72.9
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y 83 (114)
.+.|...+++..+.+|+++.|.|.+.+.+ . .+.|+|++..+ ..+.||.+..+| .|.|.+++.+|+| .|
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~--~-~v~W~k~g~~~-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y 78 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEK--V-TGKWYKNGVEV-----RPSKRITISHVGRFHKLVIDDVRPEDEG-DY 78 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSS--C-EEEEEESSCBC-----CCCSSCEEEEETTEEEEEESSCCTTTCS-CE
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCC--c-ceEEEcCCEEC-----cCCCCEEEEEeCCEEEEEECCCCcCCCE-EE
Confidence 35688899999999999999999997643 2 38999999853 456788887777 8999999999996 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+|.|.|. ..+..++|.|.+.
T Consensus 79 ~C~a~n~-----~~~~~~~l~V~~~ 98 (106)
T 2dlt_A 79 TFVPDGY-----ALSLSAKLNFLEI 98 (106)
T ss_dssp EEEEETS-----CCCCCBCEEEECC
T ss_pred EEEEccC-----CceEEEEEEEEEE
Confidence 9999996 2467888888753
No 28
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.67 E-value=1.4e-16 Score=102.77 Aligned_cols=87 Identities=22% Similarity=0.448 Sum_probs=72.1
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCc---EEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGA---LHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~---L~I~~v~~~D~gg~ 82 (114)
..+.|...+++..+.+|.++.|.|.+.+. + .+.|+|++..+ ..+.||.+..+|. |.|.+++.+|+| .
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p--~v~W~k~~~~~-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~ 76 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--A--PVEWKKGPETL-----RDGGRYSLKQDGTRCELQIHDLSVADAG-E 76 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--C--CCEEESSSSBC-----CSSSSCEEEEETTEEEEEESSCCTTTCS-E
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--C--eeEEEECCEEC-----CCCCCEEEEecCCEEEEEECCCCcccCE-E
Confidence 44678888999999999999999999653 3 68999999853 4678999988887 999999999996 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|+|.|.|. +..+.|.|.+++
T Consensus 77 Y~C~a~n~-------~~~~~l~V~~~p 96 (108)
T 2dm7_A 77 YSCMCGQE-------RTSATLTVRALP 96 (108)
T ss_dssp EEEEETTE-------EEEEECEEECCC
T ss_pred EEEEEcCC-------EEEEEEEEecCC
Confidence 99999652 456788888743
No 29
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.67 E-value=3.9e-17 Score=103.91 Aligned_cols=97 Identities=9% Similarity=0.247 Sum_probs=70.0
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc------cCCcEEEeecCCCCCC
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT------TAGALHIRDTGMEDSY 80 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~------~~G~L~I~~v~~~D~g 80 (114)
.+.+...|++..+.+|.+|.|.|.+.+.+.+.+.+.|+|++..+.........|+.+. .++.|.|.+++.+|+|
T Consensus 10 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 89 (112)
T 3so5_A 10 XPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEG 89 (112)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCE
T ss_pred CCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCC
Confidence 3568888999999999999999998644333238999999986521111111233222 1478999999999995
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|+|.|.|..+. ..|..+.|.|.
T Consensus 90 -~Y~C~a~n~~g~--~~s~~~~l~V~ 112 (112)
T 3so5_A 90 -XYQCVISNHFGS--SYSVXAXLTIN 112 (112)
T ss_dssp -EEEEEEEETTEE--EECCCEEEEEC
T ss_pred -eEEEEEEeCCCc--EEEeEEEEEeC
Confidence 999999998754 25778888874
No 30
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.67 E-value=1.1e-16 Score=101.61 Aligned_cols=85 Identities=26% Similarity=0.351 Sum_probs=69.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|...|++..+.+|.++.|.|.+.+.+ + .+.|+||+..+ ..++|+.+. ++.|.|.+++.+|+| .|+|.|
T Consensus 10 p~~~~~~~~~~v~~G~~v~l~C~~~g~p-p--~i~W~k~g~~~-----~~~~~~~~~-~~~L~i~~~~~~D~G-~Y~C~a 79 (95)
T 2ckn_A 10 WGVPVEVESLLVHPGDLLQLRCRLRDDV-Q--SINWLRDGVQL-----VESNRTRIT-GEEVEVRDSIPADSG-LYACVT 79 (95)
T ss_dssp CCBTTBBCCEEECTTSCEEEECCEESSC-C--EEEEEBTTBCC-----CCCSSEEEC-SSEEEESSCCGGGSE-EEEEEE
T ss_pred CEEEcCcceEEEcCCCeEEEEEECCCCC-C--ceEEEECCEec-----CCCCCEEEe-CCEEEECCCChHHCE-EEEEEe
Confidence 4577788999999999999999997753 3 89999998853 456788876 799999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEE
Q psy9140 88 THKLTGERKISPPSQVMV 105 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V 105 (114)
.|..+. .+..+.|.|
T Consensus 80 ~n~~g~---~~~~~~l~V 94 (95)
T 2ckn_A 80 SSPSGS---DTTYFSVNV 94 (95)
T ss_dssp EETTEE---EEEEEEEEE
T ss_pred ccCCCc---EEEEEEEEE
Confidence 998754 344566665
No 31
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.67 E-value=1.5e-16 Score=109.37 Aligned_cols=95 Identities=16% Similarity=0.377 Sum_probs=75.7
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc--cCC--cEEEeecCCCCCCee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT--TAG--ALHIRDTGMEDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~--~~G--~L~I~~v~~~D~gg~ 82 (114)
.+.|...|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ..+.||.+. .+| .|.|.+++.+|+| .
T Consensus 41 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p--~v~W~k~g~~~-----~~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~ 112 (154)
T 1fhg_A 41 KPYFTKTILDMEVVEGSAARFDCKVEGYPDP--EVMWFKDDNPV-----KESRHFQIDYDEEGNCSLTISEVCGDDDA-K 112 (154)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCC--EEEEEETTEEC-----CCSSSEEEEECTTCEEEEEESSCCGGGCE-E
T ss_pred CCeEEccCCcEEEeCCCeEEEEEEEEEecCC--EEEEEECCEEC-----CCCCcEEEEECCCCeEEEEECCCChhcCE-E
Confidence 4668888999999999999999999766544 89999999854 456788775 234 8999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
|+|.|.|.++. .+..+.|.|..++.+.
T Consensus 113 Y~C~a~N~~G~---~~~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 113 YTCKAVNSLGE---ATCTAELLVETMGKEG 139 (154)
T ss_dssp EEEEEEETTEE---EEEEEEEEEECC----
T ss_pred EEEEEEECCCe---EEEEEEEEEeCcCcCC
Confidence 99999998764 4667899999887654
No 32
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=3.7e-16 Score=100.27 Aligned_cols=86 Identities=21% Similarity=0.313 Sum_probs=70.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCC--cEEEccC---CcEEEeecCCCCCCeeeE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGG--RYSITTA---GALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~--r~~v~~~---G~L~I~~v~~~D~gg~Y~ 84 (114)
|...+++..+.+|.++.|.|.+.+ +. ..+.|+||+..+ ..+. ||.+..+ +.|.|.+++.+|+| .|+
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~-~~--~~v~W~k~g~~l-----~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~Y~ 80 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE-DD--ANVKWFKNGEEI-----IPGPKSRYRIRVEGKKHILIIEGATKADAA-EYS 80 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS-SS--CCCEEEETTEEC-----CCSTTCSEEEEEETTEEEEEEEEECTTTCS-EEE
T ss_pred eeccCCCEEEECCCCEEEEEEecC-CC--CeEEEEECCEEC-----CCCCceEEEEEEcCCEEEEEECCCCcccCE-EEE
Confidence 788899999999999999999954 22 278999999864 3344 8888765 47999999999996 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|.|.| .+..++|.|.+++..
T Consensus 81 C~a~n-------~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 81 VMTTG-------GQSSAKLSVDLKSGP 100 (103)
T ss_dssp EEETT-------EEEEEEEEEECCCSC
T ss_pred EEECC-------CcEEEEEEEeCCCCC
Confidence 99998 255789999987653
No 33
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.65 E-value=5.7e-16 Score=100.73 Aligned_cols=88 Identities=22% Similarity=0.349 Sum_probs=72.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
+.|...+++..+.+|+++.|.|.+.+. + .+.|+||+..+ ..+.||.+..+| .|.|.+++.+|+| .|+
T Consensus 20 p~~~~~~~~~~v~~G~~v~l~C~~~~~--p--~v~W~k~~~~l-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~ 89 (113)
T 2edh_A 20 IKFTEGLRNEEATEGATAVLRCELSKM--A--PVEWWKGHETL-----RDGDRHSLRQDGARCELQIRGLVAEDAG-EYL 89 (113)
T ss_dssp CCEEECCCCCEECTTSCEEEEEEESSC--C--CCEEEESSSBC-----CCSSSEEEEEETTEEEEEECSCCSTTCE-EEE
T ss_pred CcccccCCceEEeCCCeEEEEEEECCC--C--cEEEEECCEEC-----CCCCcEEEEECCCEEEEEECCCChhhCE-EEE
Confidence 468889999999999999999999553 3 68999999853 457899998888 7999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
|.|. . .+..+.|.|.+++..+
T Consensus 90 C~a~----~---~~~~~~l~V~~~p~~~ 110 (113)
T 2edh_A 90 CMCG----K---ERTSAMLTVRAMPSGP 110 (113)
T ss_dssp EEET----T---EEEEEEEEECCCCCSS
T ss_pred EEeC----C---CCEEEEEEEeCCCCCc
Confidence 9992 2 3557899999876543
No 34
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.65 E-value=5.8e-16 Score=98.23 Aligned_cols=84 Identities=21% Similarity=0.322 Sum_probs=67.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
+.|...|++..+.+|.+|.|.|.+ +.+.+ .+.|+||+..+ ..+.||.+..+| .|.|.+++.+|+| .|+
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~--~v~W~k~~~~l-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~ 79 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGV--KVRWQRGGSDI-----SASNKYGLATEGTRHTLTVREVGPADQG-SYA 79 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSC--CCEEECSSSEE-----CSSTTCEEEEETTEEEEEESSCCTTCCS-EEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCC--eEEEEECCEEC-----CCCCcEEEEEcCCEEEEEEcCCCcccCE-EEE
Confidence 468888999999999999999998 43322 78999999853 456789887766 5999999999996 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEec
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|.+ .+..++|.|+|
T Consensus 80 C~ag~-------~~~~~~l~V~e 95 (95)
T 2k1m_A 80 VIAGS-------SKVKFDLKVIE 95 (95)
T ss_dssp EEETT-------EEEEEEEEEEC
T ss_pred EEECC-------ceEEEEEEEeC
Confidence 99933 24458898875
No 35
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.65 E-value=1.3e-16 Score=100.62 Aligned_cols=90 Identities=10% Similarity=0.067 Sum_probs=68.7
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeeeeccCCcEEEc-cCCcEEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSIIHSGGRYSIT-TAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~~~~~~r~~v~-~~G~L~I~~v~~~D~gg~ 82 (114)
+.|.|...+++..+.+|+++.|.|.+.+++.| .++|+|++ ..+ ..+.++... ..+.|.|.+++.+|+| .
T Consensus 1 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p--~i~W~k~~~~~~~-----~~~~~~~~~~~~~~L~i~~~~~~D~G-~ 72 (93)
T 1wit_A 1 LKPKILTASRKIKIKAGFTHNLEVDFIGAPDP--TATWTVGDSGAAL-----APELLVDAKSSTTSIFFPSAKRADSG-N 72 (93)
T ss_dssp CCCEECCCCCEEEECTTBCCEEEEEEECCSSC--EEEEECSTTTCBC-----STTSEEEEETTEEEEECTTBCGGGCE-E
T ss_pred CCCeEEcCCCceEEeCCCEEEEEEEEEEcCCC--EEEEEECCCCccc-----CCcEEEEecCCEEEEEECCCChhcCE-E
Confidence 35677778889999999999999999887655 89999999 643 222233222 2357999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+|.|.|..+. .+..+.|.|+
T Consensus 73 Y~C~a~N~~G~---~~~~~~l~V~ 93 (93)
T 1wit_A 73 YKLKVKNELGE---DEAIFEVIVQ 93 (93)
T ss_dssp EEEEEEETTEE---EEEEEEEEEC
T ss_pred EEEEEEcCCCe---EEEEEEEEEC
Confidence 99999998763 4556677764
No 36
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.65 E-value=4.5e-16 Score=101.62 Aligned_cols=99 Identities=17% Similarity=0.258 Sum_probs=74.0
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEee-----cCCCCCC
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRD-----TGMEDSY 80 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~-----v~~~D~g 80 (114)
..|.|...|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+.........++.+.++|.|.+.. ++.+|+|
T Consensus 8 ~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G 85 (117)
T 2v9t_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTP--TIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (117)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCC--EEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCE
T ss_pred CCCeeEcCCCCEEEcCCCcEEEEEECCccCCC--eEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCE
Confidence 34668888999999999999999999776554 7999999986521111112356677889887764 5799995
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|+|.|.|.++. ..+..++|.|..+.
T Consensus 86 -~Y~C~a~N~~G~--~~s~~~~l~~~~~~ 111 (117)
T 2v9t_A 86 -VYVCVARNYLGE--AVSHDASLEVAAAA 111 (117)
T ss_dssp -EEEEEEEETTEE--EECCCEEEEEC---
T ss_pred -EEEEEEEeCccc--eEeeeEEEEhhhhh
Confidence 999999999865 36669999988654
No 37
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=2.7e-16 Score=100.62 Aligned_cols=90 Identities=19% Similarity=0.368 Sum_probs=73.7
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~ 82 (114)
..+.|...+++..+.+|+++.|.|.+.+ +.+ .+.|+||+..+ ..+.||.+..+| .|.|.+++.+|+| .
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~--~v~W~k~g~~~-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~ 77 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGT--PVHWLKDRKAI-----RKSQKYDVVCEGTMAMLVIRGASLKDAG-E 77 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSC--CCCEEESSCBC-----CCSSSEEEEEETTEEEEEESSCCTTTCS-E
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCC--cEEEEECCEEc-----cCCCCEEEEECCCEEEEEECCCCcccCE-E
Confidence 3456888899999999999999999964 222 78999999853 456799998777 4999999999996 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|+|.|.|. +..++|.|.+++..
T Consensus 78 Y~C~a~n~-------~~~~~l~V~~~p~~ 99 (103)
T 2edf_A 78 YTCEVEAS-------KSTASLHVEEKASG 99 (103)
T ss_dssp EEEECSSC-------EEEEEEEECCCSSS
T ss_pred EEEEEccC-------CcEEEEEEeCCCCC
Confidence 99999992 45789999876653
No 38
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.65 E-value=1.7e-15 Score=96.84 Aligned_cols=90 Identities=22% Similarity=0.384 Sum_probs=73.5
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCc---EEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGA---LHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~---L~I~~v~~~D~gg~ 82 (114)
..+.|...+++..+.+|.++.|.|.+.+.+.+ +.|+|++..+ ..+.||.+..+|. |.|.+++.+|+| .
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~---v~W~k~~~~l-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~ 77 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP---VKWCYGNNVL-----RPGDKYSLRQEGAMLELVVRNLRPQDSG-R 77 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS---CEEEESSSBC-----CCSSSEEEEECSSEEEEEECSCCTTTCC-C
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC---eEEEECCEEC-----CCCCcEEEEEcCCEEEEEEccCCcccCE-E
Confidence 34668888999999999999999999765433 8999998853 4577999988887 999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|+|.+. . .+..++|.|.+++..
T Consensus 78 Y~C~~g----~---~~~~~~l~V~~~p~~ 99 (103)
T 2e7b_A 78 YSCSFG----D---QTTSATLTVTALPSG 99 (103)
T ss_dssp EEEECS----S---CBCCBCEEEECCCCC
T ss_pred EEEEEC----C---cEEEEEEEEEecccc
Confidence 999832 2 466889999987643
No 39
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=1.3e-16 Score=102.05 Aligned_cols=87 Identities=20% Similarity=0.281 Sum_probs=70.5
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCC----cEEEccCC---cEEEeecCCCCC
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGG----RYSITTAG---ALHIRDTGMEDS 79 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~----r~~v~~~G---~L~I~~v~~~D~ 79 (114)
.+.|...+++..+.+|++|.|.|.+.+.+ + .+.|+||+..+ ..+. ||.+..+| .|.|.+++.+|+
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~--~v~W~k~g~~i-----~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 79 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-A--QVMWMKNGVEL-----TREDSFKARYRFKKDGKRHILIFSDVVQEDR 79 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-C--CCEEEESSCBC-----CCSCCSSCCCEEEECSSEEEEECSSCCGGGC
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-C--EEEEEECCEEC-----CCCCCcceeEEEEECCCEEEEEECCCChhhC
Confidence 45688889999999999999999997654 3 78999999864 2233 88887766 499999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
| .|+|.|.|. +..++|.|.+++
T Consensus 80 G-~Y~C~a~n~-------~~~~~l~V~~~P 101 (101)
T 2edk_A 80 G-RYQVITNGG-------QCEAELIVEEKQ 101 (101)
T ss_dssp S-BEEEECSSC-------EECCBEEEECCC
T ss_pred E-EEEEEEcCC-------cEEEEEEEeCCC
Confidence 6 999999982 346789998763
No 40
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=1.6e-16 Score=109.60 Aligned_cols=89 Identities=16% Similarity=0.190 Sum_probs=68.8
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeee------------------------eeeeccCCcEEEccCCc
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEA------------------------RSIIHSGGRYSITTAGA 68 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~------------------------~~~~~~~~r~~v~~~G~ 68 (114)
.|++..|.+|+++.|.|.+.+++.| .++|+|++.... .+....+.|+.+..++.
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P--~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~ 101 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAP--TVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKD 101 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCC--EEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETT
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCC--eEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCC
Confidence 3789999999999999999887665 899999982000 00123567888877665
Q ss_pred ---EEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 69 ---LHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 69 ---L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|.+++.+|+| .|+|.|.|.++. .+..++|.|.+
T Consensus 102 ~s~L~I~~v~~~DsG-~Y~C~A~N~~G~---~~~~~~L~V~d 139 (139)
T 1gxe_A 102 RSIFTVEGAEKEDEG-VYTVTVKNPVGE---DQVNLTVKVID 139 (139)
T ss_dssp EEEEECSCCCTTTCE-EEEEEEECSSCE---EEEEEEEEECC
T ss_pred EEEEEECCCCcccCE-EEEEEEEeCCce---EEEEEEEEEEC
Confidence 999999999995 999999999864 45567777753
No 41
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=1.5e-16 Score=107.91 Aligned_cols=93 Identities=22% Similarity=0.176 Sum_probs=71.2
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCC---CCCcceEEEeeCCeeeeeeeeccCCcEEEcc---------CCcEEEeecCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAY---NHNLLLIAWLREGVSEARSIIHSGGRYSITT---------AGALHIRDTGM 76 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~---~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~---------~G~L~I~~v~~ 76 (114)
.|...|++..|.+|..|.|.|.+.+. +.| .|.|+|+....+ ....+.||.+.. +++|.|++|+.
T Consensus 14 ~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P--~V~W~Kgk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 14 VFLKKPDSVSVETGKDAVVVAKVNGKELPDKP--TIKWFKGKWLEL--GSKSGARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp SCSBCCCCCEEETTSCEECCEEEETTTSSSCC--CCEEEETTTCCC--CCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred eEEECCCCeEEeCCCCEEEEEEEeccCCCCCC--cEEEeeCCEecc--CCCCccEEEeccccccccccceEEEEEeeCCh
Confidence 48899999999999999999998543 334 899999753211 111245555521 47899999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+|+| .|+|.|.|..+ +.|..++|.|.+|.
T Consensus 90 ~D~G-~Y~Cevsn~~g---~~s~~~~L~V~~~~ 118 (118)
T 2edn_A 90 GDRG-YYRLEVKAKDT---CDSCGFNIDVEAPR 118 (118)
T ss_dssp TTCS-CEEEEEECSSC---EEEEEECCEEECCC
T ss_pred hhCE-EEEEEEEEcCC---cEEEEEEEEEEcCC
Confidence 9996 99999999875 36779999999863
No 42
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=99.90 Aligned_cols=84 Identities=15% Similarity=0.141 Sum_probs=67.7
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc-CC--cEEEeecCCCCCCeeeEEEEeec
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT-AG--ALHIRDTGMEDSYIRYYCQTTHK 90 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~-~G--~L~I~~v~~~D~gg~Y~C~a~n~ 90 (114)
+++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ . ++|+.+.. ++ .|.|.+++.+|+| .|+|.|.|.
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~p--~i~W~k~g~~l-----~-~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C~a~N~ 101 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPRP--QVVWTKGGAPL-----D-TSRVHVRTSDFDTVFFVRQAARSDSG-EYELSVQIE 101 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESCC--EEEEEETTEEC-----C-CSSCEEEECSSEEEEEESSCCTTTCE-EEEEEEECS
T ss_pred CCCEEEECCCEEEEEEEEccCCCC--EEEEEECCEEC-----C-CCcEEEEECCCeEEEEECCCChhcCE-EEEEEEEeC
Confidence 577889999999999999776555 89999999864 2 45665543 33 4999999999995 999999999
Q ss_pred cCCcEEeCCCeEEEEeccc
Q psy9140 91 LTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 91 l~~~~~~s~~a~L~V~~~~ 109 (114)
.+. .+..+.|.|.+++
T Consensus 102 ~G~---~~~~~~l~V~~~P 117 (118)
T 2e7c_A 102 NMK---DTATIRIRVVEKA 117 (118)
T ss_dssp SCE---ECCEEEEEEECCC
T ss_pred CCe---EEEEEEEEEEcCC
Confidence 763 6778899998765
No 43
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=7.7e-16 Score=100.33 Aligned_cols=85 Identities=20% Similarity=0.373 Sum_probs=67.9
Q ss_pred ccceeeccce-eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccC-CcEEEccCC---cEEEeecCCCCCCe
Q psy9140 7 SSDYEINTGN-TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSG-GRYSITTAG---ALHIRDTGMEDSYI 81 (114)
Q Consensus 7 ~~~~~v~~~d-~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~-~r~~v~~~G---~L~I~~v~~~D~gg 81 (114)
.+.|...+.+ ..+.+|.+|.|.|.+ +.+.+ .+.|+||+..+ ..+ .||.+..+| .|.|.+++.+|+|
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~--~v~W~k~g~~l-----~~~~~~~~~~~~~~~~~L~I~~v~~~D~G- 85 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDA--EVKWLKNGQEI-----QMSGSKYIFESIGAKRTLTISQCSLADDA- 85 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSS--CCEEEESSSEE-----CCCSSSSEEEEETTEEEEEECSCSSSSCE-
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCC--EEEEEECCEEC-----CCCCCeEEEEecCCEEEEEECCCCcccCE-
Confidence 4568777777 789999999999998 43333 78999999864 334 799888778 8999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|+|.|.| .+..++|.|++
T Consensus 86 ~Y~C~a~~-------~~~~~~l~V~e 104 (104)
T 1pd6_A 86 AYQCVVGG-------EKCSTELFVKE 104 (104)
T ss_dssp EEEEEETT-------EEECCEEEEEC
T ss_pred EEEEEECC-------CcEEEEEEEeC
Confidence 99999954 23467888875
No 44
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.64 E-value=1.6e-15 Score=101.04 Aligned_cols=95 Identities=16% Similarity=0.086 Sum_probs=70.7
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeee----ee----------eeeccCCcEEEccCCcEEEeec
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSE----AR----------SIIHSGGRYSITTAGALHIRDT 74 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~----~~----------~~~~~~~r~~v~~~G~L~I~~v 74 (114)
++.+.|....+.+|..|.|.|...+ .+...++|+|+...+ |. +...-.+|+.+.+||+|.|+||
T Consensus 2 ~l~i~~~p~~~~~G~~v~L~~~~~p--~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nv 79 (111)
T 2qsq_A 2 KLTIESTPFNVAEGKEVLLLVHNLP--QHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNI 79 (111)
T ss_dssp CCEEEEESSEEETTSCEEEEEESCC--SSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSC
T ss_pred CcEEEeccceeccCCCEEEEEeCCC--CCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccC
Confidence 3677888889999999999998522 232279999986421 00 0001268999999999999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+.+|+| .|+|.+.|..++ ..+..+.|.|.++
T Consensus 80 t~~D~G-~Ytc~v~~~~~~--~~~~~~~L~V~~~ 110 (111)
T 2qsq_A 80 IQNDAG-FYTLHVIKSDLV--NEEATGQFRVYPE 110 (111)
T ss_dssp CGGGCE-EEEEEEEETTSC--CEEEEEEEEEECC
T ss_pred cccCCe-EEEEEEEeCCCc--EEEEEEEEEEecC
Confidence 999995 999999997443 1355778888764
No 45
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=2.3e-15 Score=100.86 Aligned_cols=88 Identities=19% Similarity=0.259 Sum_probs=70.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCC----------cEEEccCC---cEEEeec
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGG----------RYSITTAG---ALHIRDT 74 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~----------r~~v~~~G---~L~I~~v 74 (114)
+.|...++|..|.+|+.|+|.|.+.+ .+ .+.|+|||..| ..+. ||.+..+| .|.|+++
T Consensus 9 ~~~~~~l~d~~v~eG~~a~f~C~vs~--~p--~v~W~knG~~l-----~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v 79 (112)
T 2e6q_A 9 ARLVAGLEDVQVYDGEDAVFSLDLST--II--QGTWFLNGEEL-----KSNEPEGQVEPGALRYRIEQKGLQHRLILHAV 79 (112)
T ss_dssp CCEEECCCCEEEETTCEEEEEEEESS--CC--CCEEEESSCBC-----CSSCCCTTSCTTSCEEEECCBTTEEEEEEESC
T ss_pred cEEecCCCCeEEcCCCcEEEEEEECC--CC--eEEEEECCEEC-----ccCcccccccccccEEEEEeCCcEEEEEECCC
Confidence 34889999999999999999999965 23 68999999964 3444 99998878 6999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+.+|+| .|+|..-+ + ..+.|+|.|.+++..
T Consensus 80 ~~~D~G-~Y~~~~~~---~---~~ssA~L~V~~~p~~ 109 (112)
T 2e6q_A 80 KHQDSG-ALVGFSCP---G---VQDSAALTIQESSGP 109 (112)
T ss_dssp CSTTCS-EEEEEEET---T---EEEEEEEEEECSSCS
T ss_pred CHHHCc-cEEEEEEC---C---eeEEEEEEEeCCCcc
Confidence 999996 99773333 2 245799999987654
No 46
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1e-15 Score=98.03 Aligned_cols=89 Identities=17% Similarity=0.284 Sum_probs=72.3
Q ss_pred ccceeeccce---eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCC
Q psy9140 7 SSDYEINTGN---TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSY 80 (114)
Q Consensus 7 ~~~~~v~~~d---~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~g 80 (114)
.+.+.+.|++ ..+.+|+++.|.|.+.+.+.+ +.|+|++..+ ..+.||.+..+| .|.|.+++.+|+|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~---v~W~k~g~~~-----~~~~~~~~~~~~~~~~L~I~~~~~~D~G 78 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP---ATWYKDGQKV-----EESELLVVKMDGRKHRLILPEAKVQDSG 78 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC---CEEEETTEEC-----CCBTTBEEEEETTEEEEEESSCCTTTCE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc---cEEeeCCEEC-----CCCCCEEEEeCCCEEEEEECCCChhhCE
Confidence 4567788888 789999999999999765433 7999999854 456788887655 5999999999995
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|+|.|.|. +..+.|.|.+++..
T Consensus 79 -~Y~C~a~n~-------~~~~~l~V~~~P~p 101 (104)
T 2e6p_A 79 -EFECRTEGV-------SAFFGVTVQDPSGP 101 (104)
T ss_dssp -EEEEECSSC-------CCCEEEEEECCCCS
T ss_pred -EEEEEECCc-------eEEEEEEEcCCCCC
Confidence 999999984 44789999987653
No 47
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.63 E-value=2.3e-16 Score=101.38 Aligned_cols=82 Identities=12% Similarity=0.282 Sum_probs=61.1
Q ss_pred cceeeccce-e--EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCe
Q psy9140 8 SDYEINTGN-T--FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d-~--~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg 81 (114)
|++-+.|.+ . .+.+|++++|.|.+.+ +.+ .+.|+|||..| ..++||.+..+| .|.|.+++.+|+|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~--~v~W~k~g~~i-----~~~~~~~i~~~~~~~~L~I~~v~~~D~G- 74 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDA--PVRWYKDGQEV-----EESDFVVLENEGPHRRLVLPATQPSDGG- 74 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTS--CCEEEETTSCC-----CCCSSCEEEEETTEEEEEESSCCGGGCS-
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCc--EEEEEECCEEe-----eeeeeeeEEecCCeEEEEeCCCChhhcE-
Confidence 344555644 3 3468999999999843 222 78999999854 567888887766 5999999999996
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEE
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V 105 (114)
.|+|.|.|. +..++|.|
T Consensus 75 ~Y~C~a~n~-------~~~~~ltV 91 (91)
T 2lvc_A 75 EFQCVAGDE-------CAYFTVTI 91 (91)
T ss_dssp EEEEECSSC-------EEEEEEEC
T ss_pred EEEEEEcce-------EEEEEEEC
Confidence 999999873 33556654
No 48
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.63 E-value=1.9e-15 Score=96.45 Aligned_cols=88 Identities=15% Similarity=0.243 Sum_probs=70.3
Q ss_pred ccceeeccce-eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCee
Q psy9140 7 SSDYEINTGN-TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d-~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~ 82 (114)
.+.|...+++ ..+.+|+++.|.|.+. .+.+ .+.|+||+..+ ..+.||.+..+| .|.|.+++.+|+| .
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~--~v~W~k~g~~i-----~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~ 77 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKL--EVKWYKNGQEI-----RPSTKYIFEHKGCQRILFINNCQMTDDS-E 77 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTS--CEEEEESSCBC-----CCBTTEEEEEETTEEEEEEEEECTTTCC-E
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCc--eEEEEECCEEC-----CCCCCEEEEecCCEEEEEEcCCCcCcCE-E
Confidence 4668888888 5788999999999986 3222 89999999853 456799887766 4999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|+|.| +. .+..++|.|.+++.
T Consensus 78 Y~C~a----g~---~~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 78 YYVTA----GD---EKCSTELFVRSGPS 98 (100)
T ss_dssp EEEEE----TT---EEEEEEEEECCSCC
T ss_pred EEEEE----CC---ceEEEEEEEecCCC
Confidence 99999 22 35578999998764
No 49
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=3.8e-15 Score=95.15 Aligned_cols=89 Identities=18% Similarity=0.263 Sum_probs=72.1
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y 83 (114)
.+.|...+++..+.+|.+|.|.|.+ +.+.+ .+.|+|++..+ ..+.||.+..+| .|.|.+++.+|+| .|
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~--~v~W~k~~~~l-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y 78 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT-EHPAA--TVTWRKGLLEL-----RASGKHQPSQEGLTLRLTISALEKADSD-TY 78 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC-SSCCS--CCEEEESSCBC-----CSSSSEEEEEETTEEEEEEESCCTTTCS-EE
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe-CCCCC--eEEEEeCCEEC-----CCCCeEEEEeCCCEEEEEECCCCcccCE-EE
Confidence 4568889999999999999999995 44333 78999999853 456799998777 8999999999996 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+|. .+. .+..+.|.|.+++..
T Consensus 79 ~C~----~g~---~~~~~~l~V~~~p~~ 99 (103)
T 2dku_A 79 TCD----IGQ---AQSRAQLLVQGRRSG 99 (103)
T ss_dssp EEE----CSS---CBCCEEEEEECSCCC
T ss_pred EEE----eCC---ceEEEEEEEeCccCC
Confidence 998 222 466899999876543
No 50
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.63 E-value=8.4e-16 Score=105.30 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=70.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCC---CCCcceEEEeeCCeeeeeeeeccCCcEEEcc---------CCcEEEeecC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAY---NHNLLLIAWLREGVSEARSIIHSGGRYSITT---------AGALHIRDTG 75 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~---~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~---------~G~L~I~~v~ 75 (114)
+.|...|++..|.+|++|.|.|.+.+. ++| .|.|+|+....+ ....+.|+.+.. ++.|+|++|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P--~V~W~Kgk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 83 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKP--TIKWFKGKWMDL--ASKAGKHLQLKETFERHSRVYTFEMQIIKAK 83 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCC--EEEEEESSSCCH--HHHTTSSEEEEEEEETTTTEEEEEEEECSCC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCC--cEEEeeCcCccc--CCCCCceEEEccccccccccceEEEEEccCC
Confidence 568999999999999999999998542 344 899999753210 111245665521 4789999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.+|+| .|+|.|.|..+ ..+..++|.|.+
T Consensus 84 ~~DaG-~Y~Cevsn~~g---~~~~~~~L~V~~ 111 (126)
T 2dav_A 84 DNFAG-NYRCEVTYKDK---FDSCSFDLEVHE 111 (126)
T ss_dssp TTSCE-EEEEEEECSSC---EEEECCEEEEEC
T ss_pred cccCE-EEEEEEEeCCC---cEEEEEEEEEEe
Confidence 99995 99999999853 367799999998
No 51
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.62 E-value=4.7e-16 Score=102.03 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=69.9
Q ss_pred ceeecccee-EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeee-eccCCc-EE----EccCCcEEEeecCCCCCCe
Q psy9140 9 DYEINTGNT-FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSI-IHSGGR-YS----ITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 9 ~~~v~~~d~-~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~-~~~~~r-~~----v~~~G~L~I~~v~~~D~gg 81 (114)
+..+.|.+. .+.+|+++.|.|.+.+.+.+.+.+.|+|++..+.... ...+.+ +. ...++.|.|.+++.+|+|
T Consensus 9 ~v~i~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG- 87 (122)
T 3s35_X 9 DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQG- 87 (122)
T ss_dssp EEEEESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCE-
T ss_pred EEEEcCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCE-
Confidence 355677776 8999999999999965433323889999987431100 011111 11 123568999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
.|+|.|.|..+. .+..+.|.|.+++.|.
T Consensus 88 ~Y~C~a~n~~g~---~~~~~~l~V~~~p~i~ 115 (122)
T 3s35_X 88 LYTCAASSGLMT---KKNSTFVRVHEKPFVA 115 (122)
T ss_dssp EEEEEEECSSCE---EEEEEEEEEEEEECC-
T ss_pred EEEEEEccCCCc---eEEEEEEEEeccCeEE
Confidence 999999998764 3467899999887664
No 52
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.62 E-value=2.4e-15 Score=94.44 Aligned_cols=84 Identities=14% Similarity=0.284 Sum_probs=67.8
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
.|.+.|++..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ..+ .++.|.|.+++.+|+| .|+|.|.
T Consensus 5 ~i~~~p~~~~v~~G~~~~l~C~~~g~p~p--~i~W~~~~~~~-----~~~------~~~~L~i~~v~~~d~G-~Y~C~a~ 70 (91)
T 3bfo_A 5 QICVEPTSQKLMPGSTLVLQCVAVGSPIP--HYQWFKNELPL-----THE------TKKLYMVPYVDLEHQG-TYWCHVY 70 (91)
T ss_dssp EEEECCCCEEECTTSCEEEECEEECSSCC--EEEEEETTEEC-----TTC------CSSEEEESSCCGGGCE-EEEEEEE
T ss_pred EEEECCCccEecCCCcEEEEEEeccCCCC--EEEEEcCCeeC-----CcC------CCCeEEECCCCHHhCE-EEEEEEE
Confidence 57788999999999999999999776554 89999998853 222 2478999999999995 9999999
Q ss_pred eccCCcEEeCCCeEEEEecc
Q psy9140 89 HKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 89 n~l~~~~~~s~~a~L~V~~~ 108 (114)
|..+. ..|....|.|.+.
T Consensus 71 n~~g~--~~s~~~~l~V~~~ 88 (91)
T 3bfo_A 71 NDRDS--QDSKKVEIIIDEL 88 (91)
T ss_dssp CSSCE--EECCCEEEEEC--
T ss_pred cCCCC--EEeeeEEEEEehh
Confidence 99764 3467889999765
No 53
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.62 E-value=1.6e-15 Score=105.64 Aligned_cols=98 Identities=24% Similarity=0.372 Sum_probs=73.3
Q ss_pred cccceeeccceeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
..+.+...|.+..+.+|.++.|.|.+ .+++.+ .+.|+|++..+ ...+.|+.+ .+|.|.|.+++.+|+| .|+
T Consensus 110 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~l----~~~~~~~~~-~~~~L~i~~~~~~d~G-~Y~ 181 (212)
T 2v9r_A 110 LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEP--TISWKKDGSPL----DDKDERITI-RGGKLMITYTRKSDAG-KYV 181 (212)
T ss_dssp ECSSCSBCCCCEEEETTSCEEEECBCCCEESCC--EEEEEETTEEE----CTTSTTEEE-ETTEEEESSCCGGGCE-EEE
T ss_pred ccccceeCCCceEecCCCcEEEEEecCCCCCCC--EEEEEECCccC----CCCcceEEc-cCCeEEEeeCCHhhCe-eEE
Confidence 34567778888999999999999998 555444 89999999864 223455554 5899999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALPLK 113 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~~~ 113 (114)
|.|.|..+. ..+..+.|.|.+++.++.
T Consensus 182 C~a~N~~g~--~~s~~~~l~V~~~P~~~~ 208 (212)
T 2v9r_A 182 CVGTNMVGE--RESEVAELTVLERPSFVK 208 (212)
T ss_dssp EEEEETTEE--EECCCEEEEEEC------
T ss_pred EEEecccCc--eecceEEEEEEeCchHhh
Confidence 999998754 345578999999887754
No 54
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=1.2e-15 Score=99.98 Aligned_cols=89 Identities=19% Similarity=0.303 Sum_probs=71.4
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc-cCC---cEEEeecCCCCCCeeeE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT-TAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
.|...+++..+.+|.+|.|.|.+.+.+.+ .+.|+||+..+ ..+.||.+. .+| .|.|.+++.+|+| .|+
T Consensus 15 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~k~g~~l-----~~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~ 86 (115)
T 2cr6_A 15 HIIEDLEDVDVQEGSSATFRCRISPANYE--PVHWFLDKTPL-----HANELNEIDAQPGGYHVLTLRQLALKDSG-TIY 86 (115)
T ss_dssp EEEECCCEEEEETTSCEECCCEEESTTCC--SCEEEESSCEE-----CCSSSCCBCCBTTTBCCBEECSCCTTTCE-EEE
T ss_pred eEeccCccEEEeCCCcEEEEEEEcCCCCC--ccEEEECCEEC-----CCCCcEEEEEcCCCEEEEEEcCCChhhCE-EEE
Confidence 47888999999999999999999765444 78999999854 456777765 223 7999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
|.+.+ .+..++|.|.+++.+.
T Consensus 87 C~~g~-------~~~~~~L~V~~~p~~~ 107 (115)
T 2cr6_A 87 FEAGD-------QRASAALRVTEKPSVF 107 (115)
T ss_dssp EEETT-------EECCEEEEEECCSSCC
T ss_pred EEECC-------eeEEEEEEEECCCcee
Confidence 99432 3557999999888765
No 55
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=2.1e-15 Score=97.63 Aligned_cols=89 Identities=19% Similarity=0.308 Sum_probs=70.5
Q ss_pred cceeeccce---eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCe
Q psy9140 8 SDYEINTGN---TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d---~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg 81 (114)
+.+.+.|++ ..+.+|.++.|.|.+. .+.+ .+.|+|++..+ ..+.||.+..+| .|.|.+++.+|+|
T Consensus 11 p~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~--~v~W~k~g~~~-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G- 81 (113)
T 2cpc_A 11 SSWIVYPSGKVYVAAVRLERVVLTCELC-RPWA--EVRWTKDGEEV-----VESPALLLQKEDTVRRLVLPAVQLEDSG- 81 (113)
T ss_dssp SCSEEESCSCEEEEEETTCCEEEEEEES-CTTC--CCEEEETTEEC-----CCBTTBEEEECSSEEEEEESSCCTTTCE-
T ss_pred CcEEEccCCceeEEEEcCCeEEEEEEec-CCCC--eEEEEECCEEC-----ccCCCEEEEECCCEEEEEECCCCcccCE-
Confidence 456677776 6789999999999984 3222 78999999853 456788887665 7999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
.|+|.|.| .+..+.|.|.+++.++
T Consensus 82 ~Y~C~a~n-------~~~~~~l~V~~~p~~~ 105 (113)
T 2cpc_A 82 EYLCEIDD-------ESASFTVTVTEPPVRI 105 (113)
T ss_dssp EEEEESSS-------CEEEEEEEEECCCCCC
T ss_pred EEEEEEec-------CcEEEEEEEecCCchh
Confidence 99999998 2457899999877654
No 56
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.7e-15 Score=96.00 Aligned_cols=88 Identities=23% Similarity=0.384 Sum_probs=70.5
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEE
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C 85 (114)
..+.|.+.|++..+.+|.++.|.|.+.+.+.+ .+.|+||+..+ ... .++.|.|.+++.+|+| .|+|
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~--~v~W~k~~~~~-----~~~------~~~~L~i~~v~~~d~G-~Y~C 74 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSP--QIHWMKDGVPL-----PLP------PSPVLILPEIGPQDQG-TYSC 74 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSSC--CCCCEESSSBC-----SSC------CCSEEEEESCCTTTCE-EEEC
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCCC--EEEEEECCEEC-----cCC------CCCEEEECCCCcccCE-EEEE
Confidence 44668899999999999999999999775444 78999998854 111 3679999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEecc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|.|..++ ...+....|.|.++
T Consensus 75 ~a~n~~~~-~~~s~~~~v~V~~~ 96 (96)
T 2ens_A 75 VATHSSHG-PQESRAVSISIIEP 96 (96)
T ss_dssp EECCSSCC-CEECCCEEEEECCC
T ss_pred EEEeCCCC-cEEEEEEEEEEeCC
Confidence 99997554 34677888888764
No 57
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.61 E-value=1.9e-15 Score=103.94 Aligned_cols=92 Identities=21% Similarity=0.335 Sum_probs=75.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...+.+..+.+|.++.|.|.+.+++.+ .++|+|++..+ ..+.|+.+..+|.|.|.+++.+|+| .|+|.|
T Consensus 101 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~-----~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a 172 (192)
T 2iep_A 101 PKITRPPINVKIIEGLKAVLPCTTMGNPKP--SVSWIKGDSAL-----RENSRIAVLESGSLRIHNVQKEDAG-QYRCVA 172 (192)
T ss_dssp EEEEECCCCEEEETTSCEEECCEEEEESCC--EEEEEETTEEC-----CCCSSEEECTTSCEEESSCCGGGCE-EEEEEE
T ss_pred CccccCCcceEEeCCCcEEEEEEEeccCCc--eEEEEeCCEEc-----cCCCcEEEecCCcEEEecCChhhCE-EEEEEE
Confidence 456777888899999999999999765444 89999999853 4677999999999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.++. ..+....|.|+.|+
T Consensus 173 ~n~~g~--~~s~~~~l~V~~pp 192 (192)
T 2iep_A 173 KNSLGT--AYSKLVKLEVEVFA 192 (192)
T ss_dssp EETTEE--EECCCEEEEEEC--
T ss_pred EcCCCc--EEEEEEEEEEEeCC
Confidence 998754 34668999998774
No 58
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.61 E-value=2e-15 Score=100.20 Aligned_cols=94 Identities=14% Similarity=0.203 Sum_probs=72.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee---eeccCCcEEEcc----CCcEEEeecCCCCCCee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS---IIHSGGRYSITT----AGALHIRDTGMEDSYIR 82 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~---~~~~~~r~~v~~----~G~L~I~~v~~~D~gg~ 82 (114)
+...|++..+.+|++|.|.|.+.+.+.+ .+.|++++..+++. ....++||.+.. ++.|.|.+++.+|+| .
T Consensus 4 ~~~~~~~~~v~~G~~v~L~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG-~ 80 (124)
T 3rbg_A 4 LTNHTETITVEEGQTLTLKCVTSLRKNS--SLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEG-V 80 (124)
T ss_dssp CCCSEEEEEEETTSCEEEEEECCCCTTC--EEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCE-E
T ss_pred ccCCCccEEEcCCCCEEEEeEEeccCCC--EEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCE-E
Confidence 4567888999999999999999765443 89999877754321 113578898854 579999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|+|.|.|. +. .+..+.|.|..+++
T Consensus 81 Y~C~a~n~-g~---~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 81 YKCLHYSD-SV---STKEVKVIVLATMK 104 (124)
T ss_dssp EEEEEESS-SE---EEEEEEEEEECC--
T ss_pred EEEEEEcC-CC---CcEEEEEEEEeCCC
Confidence 99999998 32 46678999987764
No 59
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.60 E-value=2.6e-15 Score=103.47 Aligned_cols=92 Identities=17% Similarity=0.243 Sum_probs=71.8
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|...+.+..+.+|.++.|.|.+.+++.+ .++|+|++..+ ....+.||.+..+|.|.|.+++.+|+| .|+|.|
T Consensus 97 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~---~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a 170 (189)
T 2v44_A 97 LTFREVVSPQEFKQGEDAEVVCRVSSSPAP--AVSWLYHNEEV---TTISDNRFAMLANNNLQILNINKSDEG-IYRCEG 170 (189)
T ss_dssp CEEESCCCSEEEETTSCEEECCEEECSSCC--EEEEEEEC--C---EECCCTTEEECTTSCEEETTCCGGGCE-EEEEEE
T ss_pred CceeecCCcEEEeCCCCEEEEEEECcCCCC--cEEEEECCcEE---eccCCCCEEEecCCcEEEEEcCcccCe-EEEEEE
Confidence 446667888899999999999999876554 89999999865 234578999999999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEe
Q psy9140 88 THKLTGERKISPPSQVMVS 106 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~ 106 (114)
.|..++.. .+....|.|+
T Consensus 171 ~n~~~~~~-~~~~~~v~Vn 188 (189)
T 2v44_A 171 RVEARGEI-DFRDIIVIVN 188 (189)
T ss_dssp EETTTTEE-EEEEEEEEEE
T ss_pred EccccCce-eeeeEEEEEe
Confidence 99986642 2334455553
No 60
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=2e-15 Score=96.48 Aligned_cols=88 Identities=25% Similarity=0.343 Sum_probs=70.4
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTH 89 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n 89 (114)
+...|++..+.+|.++.|.|.+.+.+ + .+.|+|++..+ ..+.|+.+. ++.|.|.+++.+|+| .|+|.|.|
T Consensus 6 ~~~~p~~~~v~~G~~v~L~C~~~g~p-p--~i~W~k~g~~~-----~~~~~~~~~-~~~L~i~~v~~~D~G-~Y~C~a~n 75 (99)
T 2cr3_A 6 SGVEVESFLVHPGDLLQLRCRLRDDV-Q--SINWLRDGVQL-----AESNRTRIT-GEEVEVQDSVPADSG-LYACVTSS 75 (99)
T ss_dssp CSCCEEECCBCTTSCEEEECCCCSSC-C--EEEEEESSSBC-----CCCSSEEEC-SSEEEETTCCTTTCE-EEEEEEEE
T ss_pred CCCCCcCeEEeCCCcEEEEEEecCCC-C--eEEEEECCEEC-----CCCCcEEEE-CCEEEEccCCHHHCE-EEEEEEEe
Confidence 34568888899999999999997753 3 89999999753 446688887 789999999999995 99999999
Q ss_pred ccCCcEEeCCCeEEEEecccc
Q psy9140 90 KLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~~~~~ 110 (114)
..+. .+....|.|.++..
T Consensus 76 ~~g~---~~~~~~l~V~~~~~ 93 (99)
T 2cr3_A 76 PSGS---DTTYFSVNVSDALP 93 (99)
T ss_dssp TTEE---EEEEEEECBCSCCS
T ss_pred CCce---EEEEEEEEEecCCC
Confidence 8754 35567777776554
No 61
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=5e-15 Score=94.45 Aligned_cols=80 Identities=16% Similarity=0.375 Sum_probs=65.1
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeEEEEeec
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYYCQTTHK 90 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~C~a~n~ 90 (114)
+.+..+.+|.++.|.|.+. .+.+ .+.|+||+..+ ..+.||.+..+| .|.|.+++.+|+| .|+|.|.|.
T Consensus 18 ~~~~~v~~G~~v~L~C~~~-~p~~--~v~W~k~g~~~-----~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~Y~C~a~~~ 88 (102)
T 2eo1_A 18 HREVQAEAGASATLSCEVA-QAQT--EVTWYKDGKKL-----SSSSKVRVEAVGCTRRLVVQQAGQAEAG-EYSCEAGGQ 88 (102)
T ss_dssp CEEEEEETTCCEEECCBCS-CSSS--CCEEEETTEEC-----CCCSSEEEEEETTEEEEEETTCCTTTCS-CEEEEETTE
T ss_pred cccEEEeCCCcEEEEEEec-CCCC--ceEEEECCEEC-----CCCCCEEEEEcCCEEEEEECCCCcccCE-EEEEEcCCC
Confidence 4667899999999999985 3222 78999999854 456689888766 7999999999996 999999653
Q ss_pred cCCcEEeCCCeEEEEeccc
Q psy9140 91 LTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 91 l~~~~~~s~~a~L~V~~~~ 109 (114)
+..++|.|.+|.
T Consensus 89 -------~~~~~l~V~~p~ 100 (102)
T 2eo1_A 89 -------QLSFRLQVAGQC 100 (102)
T ss_dssp -------ECCEEEEEESCC
T ss_pred -------cEEEEEEEeCCC
Confidence 456899999875
No 62
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.59 E-value=3.4e-15 Score=123.63 Aligned_cols=105 Identities=31% Similarity=0.659 Sum_probs=85.7
Q ss_pred eccccceeeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCee
Q psy9140 4 GDMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 4 avv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~ 82 (114)
+++.+.|...+++..|.+|++|+|+|.+++...++. .+.|+|++..+..+....++||.+.++|+|+|++|+.+|++|.
T Consensus 135 ~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~g~ 214 (816)
T 3dmk_A 135 AVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKS 214 (816)
T ss_dssp EECCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECBSSCBTTTEEECTTSCEEESSCCGGGSSCE
T ss_pred EEEccccEEEEecceEecCceEEEEECCCccccccEEEEEEEecCceEeccccCCCceEEEecCceEEEecCChhhccce
Confidence 445678889999999999999999999876544433 8999999886533223358899999999999999999998349
Q ss_pred eEEEEeeccCCcEEeCC-CeEEEEecc
Q psy9140 83 YYCQTTHKLTGERKISP-PSQVMVSEI 108 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~-~a~L~V~~~ 108 (114)
|+|.|.|..+++.+.+. .+.|.|.++
T Consensus 215 Y~C~~~~~~~~~~~~s~~~~~l~v~~~ 241 (816)
T 3dmk_A 215 YQCRTKHRLTGETRLSATKGRLVITEP 241 (816)
T ss_dssp EEEEEEETTTCCEEECSBCEEEEEECC
T ss_pred eEEEEeeeeeeeeeecccccceEEeCC
Confidence 99999998888777766 678888875
No 63
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.59 E-value=6e-15 Score=104.15 Aligned_cols=96 Identities=20% Similarity=0.340 Sum_probs=73.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC---CcEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA---GALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~---G~L~I~~v~~~D~gg~Y~ 84 (114)
+.+...|++..+.+|.++.|.|.+.+++.+ .++|+|++..+. ......|+.+..+ +.|.|.+++.+|+| .|+
T Consensus 109 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~v~W~~~g~~l~--~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~ 183 (212)
T 2yd6_A 109 PTIDMGPQLKVVERTRTATMLCAASGNPDP--EITWFKDFLPVD--TSNNNGRIKQLRSESIGALQIEQSEESDQG-KYE 183 (212)
T ss_dssp CEEEECCCCEEEETTSCEEEEEEEECSSCC--EEEEEETTEEC--------CCEEEEEETTEEEEEECSCCGGGCE-EEE
T ss_pred ceeecCCcceeEecCCCEEEEEEecCCCCC--eEEEEECCcccc--CcCCCceEEEEecCCeEEEEEcCCCcccCE-EEE
Confidence 457778888899999999999999776544 899999998652 1223468877653 78999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.|.|.++. ..|++|+|.|..+..
T Consensus 184 C~a~N~~G~--~~s~~a~l~~~~~~~ 207 (212)
T 2yd6_A 184 CVATNSAGT--RYSAPANLYVRGTKH 207 (212)
T ss_dssp EEEEETTEE--EECCCEEEEEEC---
T ss_pred EEEECCCCc--cccccccEEEEeccc
Confidence 999999765 467799999987654
No 64
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.58 E-value=4.9e-15 Score=101.44 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=73.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|...|.+..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ ....+.||.+..++.|.|.+++.+|+| .|+|.+
T Consensus 3 ~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~~ 76 (189)
T 2v5t_A 3 LTFREVVSPQEFKQGEDAEVVCRVSSSPAP--AVSWLYHNEEV---TTISDNRFAMLANNNLQILNINKSDEG-IYRCEG 76 (189)
T ss_dssp CEEEECCSSEEEETTSCEEECCEEECSSCC--EEEEEC--------CBCCCTTEEECTTSCEEETTCCGGGCE-EEEEEE
T ss_pred ceeeccCCCEEEeCCCcEEEEEEEcCCCCC--EEEEEECCccc---eeccCCeEEEecCCCEEEeeCCHhHCc-EEEEEE
Confidence 468889999999999999999999765433 89999998864 234578999999999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|...+. ..+....|.|..++.+
T Consensus 77 ~~~~~~~-~~~~~~~l~v~~~p~~ 99 (189)
T 2v5t_A 77 RVEARGE-IDFRDIIVIVNVPPAI 99 (189)
T ss_dssp EETTTTE-EEEEEEEEEEEEEEEE
T ss_pred EEcCCCc-eEEEEEEEEecCCCCc
Confidence 9987543 2233556666655543
No 65
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.58 E-value=1.1e-14 Score=110.03 Aligned_cols=103 Identities=32% Similarity=0.679 Sum_probs=83.7
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
+.+.|...+.+..+.+|+++.|.|.++++..++. .+.|+|++..+..+....++|+.+..+|.|.|.+++.+|++|.|+
T Consensus 102 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~ 181 (388)
T 2v5m_A 102 VAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQ 181 (388)
T ss_dssp CCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEE
T ss_pred cccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEE
Confidence 3466788888999999999999999987655444 899999998764333344789999999999999999999934999
Q ss_pred EEEeeccCCcEEeCC-CeEEEEecc
Q psy9140 85 CQTTHKLTGERKISP-PSQVMVSEI 108 (114)
Q Consensus 85 C~a~n~l~~~~~~s~-~a~L~V~~~ 108 (114)
|.|.|..++..+.+. ...|.|.+|
T Consensus 182 C~~~n~~~~~~~~~~~~~~l~v~~~ 206 (388)
T 2v5m_A 182 CRTKHRLTGETRLSATKGRLVITEP 206 (388)
T ss_dssp EEEEETTTCCEEECSSCBCEEEECC
T ss_pred EEeccCCCCceeeccccceEEEecC
Confidence 999999877766664 568888875
No 66
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.57 E-value=8.4e-15 Score=102.90 Aligned_cols=100 Identities=20% Similarity=0.368 Sum_probs=76.2
Q ss_pred eccccceeeccceeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCeeeeee---eeccCCcEEEccCCcEEEeecCCCCC
Q psy9140 4 GDMSSDYEINTGNTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGVSEARS---IIHSGGRYSITTAGALHIRDTGMEDS 79 (114)
Q Consensus 4 avv~~~~~v~~~d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~~~~~~---~~~~~~r~~v~~~G~L~I~~v~~~D~ 79 (114)
.+..+.|...|.+..+.+|.++.|.|.+ .+++.+ .++|+|++..+... ....+.|+.+..+|.|.|.+++.+|+
T Consensus 105 ~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 182 (217)
T 2vr9_A 105 AVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEP--TLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDE 182 (217)
T ss_dssp CEECCSCSBCCCCEEECTTSCEEECCBCCCEESCC--EEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTC
T ss_pred EEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCC--eEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHC
Confidence 3445678888999999999999999998 555433 89999999865210 01246788888899999999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
| .|+|.|.|.++. ..++.+.|.+...
T Consensus 183 G-~Y~C~a~N~~G~--~~~~~~~lv~~~~ 208 (217)
T 2vr9_A 183 G-NYKCIAQNLVGT--RESSYAKLIVQVK 208 (217)
T ss_dssp E-EEEEEEEETTEE--EECCCEEEEEC--
T ss_pred e-EEEEEEEcccce--eccccEEEEEEee
Confidence 5 999999999864 3555777777643
No 67
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.57 E-value=1.6e-16 Score=104.86 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=71.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc----cC---CcEEEeecCCCCC-
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT----TA---GALHIRDTGMEDS- 79 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~----~~---G~L~I~~v~~~D~- 79 (114)
+.+.. +.+..+.+|.+|.|.|.+.+.+.|. .+.|+|++..+. ...++||.+. .+ ..|.|.+++.+|.
T Consensus 15 P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~-~i~W~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~ 89 (122)
T 2cry_A 15 PIISS-TQTQHALHGEKGQIKCFIRSTPPPD-RIAWSWKENVLE---SGTSGRYTVETISTEEGVISTLTISNIVRADFQ 89 (122)
T ss_dssp CCEEE-ECCCCCCTTSCCCCCEEECCSSCCS-EEEEESSSCEEC---SEEETTEEEEEEEETTEEEEEEECTTCCHHHHH
T ss_pred CCccC-CCeEEEecCCCEEEEEEEeecCCCc-EeEEEECCEEcc---CCCCCCEEEEEecCCCceEEEEEEcCCChhhCC
Confidence 44556 8888999999999999998865441 499999998642 1235788873 22 2899999999998
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
| .|+|.|.|.++. .+..++|.|+++.
T Consensus 90 G-~Y~C~a~N~~G~---~~~~~~l~V~~~~ 115 (122)
T 2cry_A 90 T-IYNCTAWNSFGS---DTEIIRLKEQGSE 115 (122)
T ss_dssp S-CEEEEEECSSCE---EEEEECCCCSCSS
T ss_pred c-eEEEEEECCCCe---EEEEEEEEECCCC
Confidence 6 999999999874 3457778887654
No 68
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.57 E-value=1.2e-14 Score=102.41 Aligned_cols=92 Identities=20% Similarity=0.330 Sum_probs=73.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|.+..+.+|.++.|.|.+.+.+.+ .++|+|++..+ ...+.||.+ .+|.|.|.+++.+|+| .|+|.|
T Consensus 111 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~~~----~~~~~~~~~-~~~~L~i~~v~~~d~G-~Y~C~a 182 (212)
T 2yd1_A 111 PVITQGPGTRVIEVGHTVLMTCKAIGNPTP--NIYWIKNQTKV----DMSNPRYSL-KDGFLQIENSREEDQG-KYECVA 182 (212)
T ss_dssp CEEEECCCCEEEETTCCEEECCEEECSSCC--EEEEEETTEEC----CTTSTTEEE-ETTEEEECSCCGGGCE-EEEEEE
T ss_pred CeeEeCCCceEeecCCeEEEEEEeccCCCC--eEEEEECCeEc----ccCCCeEEc-cCCeEEEccCChhhCE-EEEEEe
Confidence 457778888899999999999999776444 89999999864 234567755 4789999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.++. ..+..+.|.|+++.
T Consensus 183 ~N~~G~--~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 183 ENSMGT--EHSKATNLYVKVRR 202 (212)
T ss_dssp EETTEE--EECCCEEEEEEC--
T ss_pred ecCCCc--eeEEEEEEEEEecc
Confidence 998764 24557899999764
No 69
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.57 E-value=1.5e-14 Score=95.92 Aligned_cols=96 Identities=18% Similarity=0.236 Sum_probs=69.4
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeee--------eccCCcEEEccCCcEEEeecCCCCCCee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSI--------IHSGGRYSITTAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~--------~~~~~r~~v~~~G~L~I~~v~~~D~gg~ 82 (114)
..|.+..+.+|++|.|.|.+.+. .... .+.|+|++..+..-. ..-.+|+.+.+++.|.|+||+.+|+| .
T Consensus 8 ~~~~~v~~~~G~~v~L~C~~~~~-~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G-~ 85 (117)
T 3q0h_A 8 ETTGNISAEKGGSIILQCHLSST-TAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTG-E 85 (117)
T ss_dssp EESCCEEEETTCCEEECEEEESC-CCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCE-E
T ss_pred EccCCEEEecCCCEEEEEEecCC-CCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCE-E
Confidence 35667899999999999998542 1223 799999876542110 01157999888899999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|+|.+.+...+. .+..+.|.|..|+.+
T Consensus 86 Y~C~v~~~~~g~--~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 86 YFCIYHTYPDGT--YTGRIFLEVLESSVA 112 (117)
T ss_dssp EEEEEEEETTCC--EEEEEEEEEECC---
T ss_pred EEEEEEECCCCC--eEEEEEEEEEccCcc
Confidence 999987643332 455789999988764
No 70
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.57 E-value=1.4e-14 Score=100.23 Aligned_cols=95 Identities=22% Similarity=0.314 Sum_probs=75.6
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc--CC--cEEEeecCCCCCCee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT--AG--ALHIRDTGMEDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~--~G--~L~I~~v~~~D~gg~ 82 (114)
.+.|...|++..+.+|+++.|.|.+.+.+.+ .++|+|++..+ ...+.||.+.. +| .|.|.+++.+|+| .
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~----~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~ 76 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKP--IVKWYRQGKEI----IADGLKYRIQEFKGGYHQLIIASVTDDDAT-V 76 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCC--EEEEEETTEEC----CCCSSSEEEEEETTTEEEEEECSCCGGGCS-E
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEEeecCCC--EEEEEECCEEC----ccCCCcEEEEEcCCCEEEEEECcCCHHhCE-E
Confidence 4678899999999999999999999765443 89999999864 23456777653 45 8999999999996 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|+|.|.|..+. .+..+.|.|..++.+
T Consensus 77 Y~C~~~n~~g~---~~~~~~l~V~~~p~~ 102 (197)
T 2j8h_A 77 YQVRATNQGGS---VSGTASLEVEVPAKI 102 (197)
T ss_dssp EEEEEEETTEE---EEEEEEEEEEEEEEE
T ss_pred EEEEEEECCCc---eeEEEEEEEcCCCcC
Confidence 99999997543 466778888866543
No 71
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.56 E-value=4e-15 Score=99.85 Aligned_cols=85 Identities=18% Similarity=0.192 Sum_probs=65.4
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeee-----ccCCcEEEc------cCCcEEEeecC
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSII-----HSGGRYSIT------TAGALHIRDTG 75 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~-----~~~~r~~v~------~~G~L~I~~v~ 75 (114)
.+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+..... ....|+.+. .++.|.|.+++
T Consensus 21 pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p--~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 98 (137)
T 3qr2_A 21 MAGFVQAPLSQQRWVGGSVELHCEAVGSPVP--EIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLV 98 (137)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCC--EEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCC
T ss_pred CCeEEcCCCCEEEeCCCCEEEEEEEeeecCC--eEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCC
Confidence 4668899999999999999999999776544 8999998765321000 002455543 56899999999
Q ss_pred CCCCCeeeEEEEeeccCCc
Q psy9140 76 MEDSYIRYYCQTTHKLTGE 94 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~ 94 (114)
.+|+| .|+|.|.|..+..
T Consensus 99 ~~D~G-~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 99 EEDTG-TYECRASNDPDRN 116 (137)
T ss_dssp GGGCE-EEEEEEECCTTSS
T ss_pred cccCE-EEEEEEEecCCcc
Confidence 99995 9999999998764
No 72
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.56 E-value=5.1e-15 Score=101.94 Aligned_cols=81 Identities=21% Similarity=0.319 Sum_probs=68.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|.+..+.+|.++.|.|.+.+++.+ .++|+|++..+ ....+.||.+..+|.|.|.+++.+|+| .|+|.|
T Consensus 101 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a 174 (191)
T 1epf_A 101 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPP--TIIWKHKGRDV---ILKKDVRFIVLSNNYLQIRGIKKTDEG-TYRCEG 174 (191)
T ss_dssp SEEEECCSSEECCTTSCEEECCEEECSSCC--EEEEEETTEEG---GGGCCTTEEECTTSCEEETTCCGGGCE-EEEEEE
T ss_pred ceEecCCCcEeecCCCeEEEEEEECCCCCC--EEEEEECCEEe---eccCCceEEEecCCeEEECCCChhhCE-EEEEEE
Confidence 446678888899999999999999876544 89999999865 234567999999999999999999995 999999
Q ss_pred eeccCCc
Q psy9140 88 THKLTGE 94 (114)
Q Consensus 88 ~n~l~~~ 94 (114)
.|..+++
T Consensus 175 ~n~~~~~ 181 (191)
T 1epf_A 175 RILARGE 181 (191)
T ss_dssp EEGGGTE
T ss_pred EEeccee
Confidence 9987654
No 73
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.56 E-value=7.1e-15 Score=99.80 Aligned_cols=98 Identities=18% Similarity=0.241 Sum_probs=73.7
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee---eeccCCcEEEcc----CCcEEEeecCCCC
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS---IIHSGGRYSITT----AGALHIRDTGMED 78 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~---~~~~~~r~~v~~----~G~L~I~~v~~~D 78 (114)
..+.|...|++..+.+|.+|.|+|.+.+.+.+ .+.|++.+...++. ....++||.+.. ++.|.|.+|+.+|
T Consensus 37 ~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~--~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 114 (145)
T 1z9m_A 37 SQDDSQPWTSDETVVAGGTVVLKCQVKDHEDS--SLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALAD 114 (145)
T ss_dssp -CCTTCCBCCCEEEETTSCEEEEEECSCCTTC--CEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGG
T ss_pred cccceecCCceEEEEcCCCEEEEEEEcCCCCc--EEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhh
Confidence 34567889999999999999999999765433 79999543322211 113467888764 5789999999999
Q ss_pred CCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 79 SYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
+| .|+|.|.|. +. .+..++|.|.+++.
T Consensus 115 sG-~Y~C~~~n~-~~---~~~~~~L~V~~~P~ 141 (145)
T 1z9m_A 115 EG-EYTCSIFTM-PV---RTAKSLVTVLGIPQ 141 (145)
T ss_dssp CE-EEEEEECSS-SC---EEEEEEEEEECCCC
T ss_pred CE-EEEEEEEcC-CC---ceEEEEEEEEeCCC
Confidence 95 999999998 43 46688999987764
No 74
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.56 E-value=7.5e-15 Score=106.75 Aligned_cols=97 Identities=16% Similarity=0.278 Sum_probs=77.1
Q ss_pred ccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc---cCCcEEEeecCCCCCCe
Q psy9140 5 DMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT---TAGALHIRDTGMEDSYI 81 (114)
Q Consensus 5 vv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~---~~G~L~I~~v~~~D~gg 81 (114)
...+.|...|++..+.+|.++.|.|.+.+.+.+ .++|+|++..+ ..+.+|.+. .++.|.|.+++.+|+|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~--~v~W~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~v~~~d~G- 74 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPI--KITWAKDNREI-----RPGGNYKMTLVENTATLTVLKVTKGDAG- 74 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCC--EEEEEETTEEC-----CSSSSEEEEEETTEEEEEESSCCGGGCE-
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCC--EEEEEECCEEC-----cCCCcEEEEEcCCEEEEEEecCCcccCE-
Confidence 445678999999999999999999999765433 89999999854 445666653 2468999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
.|+|.|.|..+. .+..+.|.|..++.++
T Consensus 75 ~Y~C~~~n~~g~---~~~~~~l~V~~~p~~~ 102 (284)
T 2rik_A 75 QYTCYASNVAGK---DSCSAQLGVQEPPRFI 102 (284)
T ss_dssp EEEEEEEETTEE---EEEEEEEEEECCCEEE
T ss_pred EEEEEEEECCce---EEEEEEEEccCCCccc
Confidence 999999997643 4667889998776543
No 75
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.56 E-value=1.2e-14 Score=109.98 Aligned_cols=95 Identities=21% Similarity=0.335 Sum_probs=74.2
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--CeeeeeeeeccCCcEEEcc---CCcEEEeecCCCCCCeeeEEE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSIIHSGGRYSITT---AGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~~~~~~r~~v~~---~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
+.+++..+.+|+++.|.|.+.+.+.+ .++|+|+ +..+.......++||.+.. ++.|.|.+++.+|+| .|+|.
T Consensus 5 ~~~~~~~~~~G~~v~l~C~~~g~p~p--~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~ 81 (389)
T 2jll_A 5 IQLKNETTYENGQVTLVCDAEGEPIP--EITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSG-RYDCE 81 (389)
T ss_dssp EECCCEEEETTSEEEEEEEEECSSCC--EEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCE-EEEEE
T ss_pred EecCceEEeCCCeEEEEEEeecccCC--eEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCE-EEEEE
Confidence 45889999999999999999876544 8999999 6654211112368998863 568999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEecccccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
|.|..+. .+..+.|.|..++.+.
T Consensus 82 a~n~~g~---~~~~~~l~V~~~P~~~ 104 (389)
T 2jll_A 82 AASRIGG---HQKSMYLDIEYAPKFI 104 (389)
T ss_dssp EECSSCE---EEEEEEEEEEEEEEEC
T ss_pred EEeCCCC---cceEEEEEEEeCCEEe
Confidence 9998764 4668899999877654
No 76
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.56 E-value=8.3e-15 Score=92.79 Aligned_cols=81 Identities=17% Similarity=0.233 Sum_probs=61.5
Q ss_pred ccceeEEEeCCeEEEEeecC-CCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeecc
Q psy9140 13 NTGNTFVLRGNIAVLQCNIP-AYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKL 91 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~-~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l 91 (114)
.|.+..+.+|.++.|.|.+. +.+.+ .+.|+|++... ...+. +..+|.|.|.+++.+|+| .|+|.|.|..
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~--~v~W~k~~~~~------~~~~~-~~~~~~L~i~~v~~~D~G-~Y~C~a~n~~ 85 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAY--TLVWTRLHNGK------LPSRA-MDFNGILTIRNVQPSDAG-TYVCTGSNMF 85 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCC--EEEEEEGGGBC------CCTTE-EEETTEEEECSCCGGGCE-EEEEEEECSS
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCc--EEEEEeCCCCC------CCcee-ecCCCEEEEeCCChhhCE-EEEEEecCCC
Confidence 45677999999999999996 44333 89999986532 11232 345799999999999995 9999999987
Q ss_pred CCcEEeCCCeEEEEe
Q psy9140 92 TGERKISPPSQVMVS 106 (114)
Q Consensus 92 ~~~~~~s~~a~L~V~ 106 (114)
+. .+..+.|.|+
T Consensus 86 g~---~~~~~~l~V~ 97 (98)
T 1gl4_B 86 AM---DQGTATLHVQ 97 (98)
T ss_dssp CE---EEEEEEEEEC
T ss_pred Cc---cccEEEEEEe
Confidence 54 4557777775
No 77
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.56 E-value=1.3e-14 Score=99.63 Aligned_cols=94 Identities=19% Similarity=0.312 Sum_probs=75.5
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y 83 (114)
.+.|...|++..+.+|+.+.|.|.+.+.+.+ .+.|+|++..+ ..+.||.+..+| .|.|.+++.+|+| .|
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y 78 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPLP--DIKWYRFGKEL-----IQSRKYKMSSDGRTHTLTVMTEEQEDEG-VY 78 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESCC--EEEEEETTEEE-----CCCSSEEEEESSSEEEEEEECCSGGGCE-EE
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCCC--EEEEEECCEEC-----CCCccEEEEeCCCEEEEEEecCCccCCE-EE
Confidence 3568899999999999999999998664333 89999999853 467888888777 7999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+|.|.|..+. .+..+.|.|..++.+
T Consensus 79 ~C~~~n~~~~---~~~~~~l~v~~~p~~ 103 (197)
T 3lcy_A 79 TCIATNEVGE---VETSSKLLLQATPQF 103 (197)
T ss_dssp EEEEECSSCE---EEEEEEEEEEEEEEE
T ss_pred EEEEECCCCc---eeEEEEEEEEcCCCC
Confidence 9999997653 344667777755443
No 78
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.55 E-value=1.6e-14 Score=98.90 Aligned_cols=94 Identities=20% Similarity=0.329 Sum_probs=71.2
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc-----CCcEEEeecCCCCCCee
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT-----AGALHIRDTGMEDSYIR 82 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~-----~G~L~I~~v~~~D~gg~ 82 (114)
+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ....++.+.. ++.|.|.+++.+|+| .
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~--~v~W~k~~~~~-----~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~ 74 (182)
T 1rhf_A 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEEP--DIQWVKDGAVV-----QNLDQLYIPVSEQHWIGFLSLKSVERSDAG-R 74 (182)
T ss_dssp ----CCCEEEEEETTCCEEEEEEEESCSSC--CEEEEETTEEC-----CSSEEEEEEEETTEEEEEEEESSCCGGGCE-E
T ss_pred CEEEeCCcceEEeCCCcEEEEEEEeCCCCC--eEEEEECCeec-----CCCCceEEEecCCCceEEEEEeecCcccCe-E
Confidence 468889999999999999999999764333 89999999854 3334444432 268999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|+|.+.|..+. ..+..+.|.|..++.+
T Consensus 75 Y~C~~~~~~~~--~~~~~~~l~V~~~p~~ 101 (182)
T 1rhf_A 75 YWCQVEDGGET--EISQPVWLTVEGVPFF 101 (182)
T ss_dssp EEEEESSCTTC--EECCCEEEEEECSCEE
T ss_pred EEEEEEcCCCc--EEEEEEEEEEecCCeE
Confidence 99999998543 3567889999877654
No 79
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.55 E-value=3.9e-15 Score=107.24 Aligned_cols=82 Identities=12% Similarity=0.185 Sum_probs=61.4
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEE---eecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHI---RDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I---~~v~~~D~gg~Y~ 84 (114)
+.+...+++..+.+|.++.|.|.+.+++.| .|+|+++++.+.. ....++|+.+.++|+|.| .+++.+|+| .|+
T Consensus 107 ~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P--~v~W~~~~~~~~~-~~~~~~r~~~~~~g~l~il~i~~v~~~D~G-~Yt 182 (203)
T 4fa8_A 107 LTLSVHSERSQFPDFSVLTVTCTVNAFPHP--HVQWLMPEGVEPA-PTAANGGVMKEKDGSLSVAVDLSLPKPWHL-PVT 182 (203)
T ss_dssp EEEEEEEEECCSSCSCCEEEEEEEEEESCC--EEEECCC-------------CCEECTTSCEEEEEEEEECSSCCC-CEE
T ss_pred ceeeecceeEEEcCCCEEEEEEEcCCCCCC--EEEEEECCeeecC-cccccceEEEeCCCCEEEEEECCCCHHHCE-EEE
Confidence 346788888999999999999999887655 8999998765432 234578999999999877 599999995 999
Q ss_pred EEEeeccCC
Q psy9140 85 CQTTHKLTG 93 (114)
Q Consensus 85 C~a~n~l~~ 93 (114)
|.|.|..+.
T Consensus 183 C~A~N~~G~ 191 (203)
T 4fa8_A 183 CVGKNDKEE 191 (203)
T ss_dssp EEEESSSCE
T ss_pred EEEEcCCCE
Confidence 999999864
No 80
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.55 E-value=1.4e-14 Score=100.39 Aligned_cols=97 Identities=21% Similarity=0.292 Sum_probs=74.2
Q ss_pred ccceeeccceeEEEeCCeEEEEeecC-CCCCCcceEEEeeCCeeeeeeeeccCCcEEE--cc--------CCcEEEeecC
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIP-AYNHNLLLIAWLREGVSEARSIIHSGGRYSI--TT--------AGALHIRDTG 75 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~-~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v--~~--------~G~L~I~~v~ 75 (114)
.+.|...|++..+.+|.++.|.|.+. +.+.+ .+.|+||+..+.. ....|+.+ .+ ++.|.|.+++
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~--~v~W~~~g~~l~~---~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 76 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPP--EVHWLRDGQILEL---ADSTQTQVPLGEDEQDDWIVVSQLRITSLQ 76 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCC--CCEEEETTEECCS---CEEEEEEEECSSSTTSEEEEEEEEEESSCC
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCc--EEEEEECCEEccc---CCCCceEEEEccccccceeeccEEEEEecc
Confidence 35789999999999999999999997 65433 7999999986521 11124433 33 3589999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.+|+| .|+|.|.|..+. ..+..+.|.|..++.+
T Consensus 77 ~~d~G-~Y~C~~~~~~~~--~~~~~~~l~V~~~p~~ 109 (195)
T 2c5d_C 77 LSDTG-QYQCLVFLGHQT--FVSQPGYVGLEGLPYF 109 (195)
T ss_dssp STTCE-EEEEEEEETTEE--EECCCEEEEECCSCEE
T ss_pred ccCCc-EEEEEEEeCCCc--eecccEEEEEecCCeE
Confidence 99995 999999997432 4566799999877654
No 81
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.55 E-value=6.7e-15 Score=93.18 Aligned_cols=83 Identities=18% Similarity=0.256 Sum_probs=60.6
Q ss_pred ceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc-cCCcEEEeecCCCCCCeeeEEEEeeccCC
Q psy9140 15 GNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT-TAGALHIRDTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 15 ~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
+...+.+|.++.|.|.+.+.+.+ .+.|+|++..+.. .....++.+. .++.|.|.+++.+|+| .|+|.|.|..+.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p--~v~W~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~a~N~~g~ 90 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMP--TMRWLKNGKEFKQ--EHRIGGYKVRNQHWSLIMESVVPSDKG-NYTCVVENEYGS 90 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCC--EEEEEETTEECCG--GGSTTCCEEEGGGTEEEECSCCGGGCE-EEEEEEEETTEE
T ss_pred cEEEecCCCEEEEEEEccccCCC--EEEEEECCEEccc--ccccccEEEecCeEEEEEccCCcCCCE-EEEEEEEeCCCE
Confidence 56778899999999999765444 7999999986421 1111223443 3568999999999995 999999998754
Q ss_pred cEEeCCCeEEEE
Q psy9140 94 ERKISPPSQVMV 105 (114)
Q Consensus 94 ~~~~s~~a~L~V 105 (114)
.+..+.|.|
T Consensus 91 ---~~~~~~l~V 99 (100)
T 3caf_A 91 ---INHTYHLDV 99 (100)
T ss_dssp ---EEEEEEEEE
T ss_pred ---EEEEEEEEE
Confidence 344566665
No 82
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.54 E-value=4.8e-14 Score=98.45 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=67.2
Q ss_pred ceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeee-----eeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEee
Q psy9140 15 GNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEAR-----SIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTH 89 (114)
Q Consensus 15 ~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~-----~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n 89 (114)
+...+.+|.++.|.|...+...+...|.|+|++..+.. .....++||.+.++|.|.|.+|+.+|+| .|+|.|.|
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G-~Y~C~~~n 82 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSG-TYNVTVYS 82 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCE-EEEEEEEE
T ss_pred eEEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCE-EEEEEEEe
Confidence 34678999999999953221112228999999975421 1123578999999999999999999995 99999999
Q ss_pred ccCCcEEeCCCeEEEEecc
Q psy9140 90 KLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~~~ 108 (114)
..+. ...+....|.|.++
T Consensus 83 ~~g~-~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 83 TNGT-RILNKALDLRILEM 100 (176)
T ss_dssp TTCC-EEEEEEEEEEEECC
T ss_pred CCCC-EEEEEEEEEEEeCC
Confidence 8654 22344678888764
No 83
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.53 E-value=1e-14 Score=111.79 Aligned_cols=87 Identities=18% Similarity=0.285 Sum_probs=73.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|...+++..+.+|.++.|.|.+.+.+.+ .++|+||+..+ ..+.|+.+ .+|.|.|.+++.+|+| .|+|.|
T Consensus 296 P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p--~i~W~k~g~~l-----~~~~~~~~-~~~~L~i~~v~~~D~G-~Y~C~A 366 (384)
T 3kld_A 296 PNWVQIINDIHVAMEESVFWECKANGRPKP--TYRWLKNGDPL-----LTRDRIQI-EQGTLNITIVNLSDAG-MYQCVA 366 (384)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEEESCC--EEEEEETTEEC-----CCBTTEEE-ETTEEEESSCCGGGCE-EEEEEE
T ss_pred CccccCCCceEecCCCCEEEEeECCccCCC--eEEEEECCEEC-----CCCccEEE-eCCEEEEeecChhhCE-EEEEEE
Confidence 557778889999999999999999776554 89999999854 45678876 4799999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEe
Q psy9140 88 THKLTGERKISPPSQVMVS 106 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~ 106 (114)
.|.++. .++.|.|.|.
T Consensus 367 ~N~~G~---~~~~a~L~V~ 382 (384)
T 3kld_A 367 ENKHGV---IFSSAELSVI 382 (384)
T ss_dssp EETTEE---EEEEEEEEEC
T ss_pred EeCCce---EEeceEEEEe
Confidence 999864 5667889885
No 84
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.53 E-value=1.5e-14 Score=99.49 Aligned_cols=95 Identities=20% Similarity=0.278 Sum_probs=74.1
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC-cEEEeecCCCCCCeeeEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG-ALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G-~L~I~~v~~~D~gg~Y~C~ 86 (114)
+.|...+++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ ...+.||.+..+| .|.|.+++.+|+| .|+|.
T Consensus 8 P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~--~i~W~~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~ 80 (192)
T 2iep_A 8 PVITTPLETVDALVEEVATFMCAVESYPQP--EISWTRNKILI----KLFDTRYSIRENGQLLTILSVEDSDDG-IYCCT 80 (192)
T ss_dssp EEESSCCCEEEEETTSCEEEECCEEEESCC--EEEEEETTEEC----CTTCTTEEEEGGGTEEEESSCCGGGCE-EEEEE
T ss_pred ceeecCccceeeeCCCcEEEEeeCCCCCCC--eEEEEECCEEc----cccCccEEEcCCccEEEEcCCCcccCe-EEEEE
Confidence 457778888999999999999999665443 89999999864 2347899988766 4999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEeccccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+.|..+.. .+..+.|.|..++.+
T Consensus 81 ~~~~~~~~--~~~~~~l~v~~~p~~ 103 (192)
T 2iep_A 81 ANNGVGGA--VESCGALQVKMKPKI 103 (192)
T ss_dssp EECSSSCC--EEEEEEEEEEEEEEE
T ss_pred EEcCCCce--eEeEEEEEEEeCCcc
Confidence 99986542 233567777765443
No 85
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=4.2e-14 Score=97.20 Aligned_cols=93 Identities=17% Similarity=0.245 Sum_probs=71.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee---CCeeeeeeeeccCCcEEEccCC---cEEEeecC-CCCCC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR---EGVSEARSIIHSGGRYSITTAG---ALHIRDTG-MEDSY 80 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k---d~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~-~~D~g 80 (114)
+.+...+....+.+|.++.|.|.+.+.+.++ .+.|+| ++..++ ....++||.+..+| .|.|.+++ .+|+|
T Consensus 84 P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G 160 (184)
T 3b5h_A 84 PRVKAVKSSEHINEGETAMLVCKSESVPPVT-DWAWYKITDSEDKAL--MNGSESRFFVSSSQGRSELHIENLNMEADPG 160 (184)
T ss_dssp CCCEESCSEEEECTTSCEEEEEECCCSSCCC-EEEEEECCSSSCEEC--CTTGGGTEEEEEETTEEEEEECSCCTTTSSE
T ss_pred CceeecCCCcEEcCCCcEEEEEEECCCCCCC-eEEEEEcCCCCCEEe--ecCCCCEEEEEecCCeeEEEEeeccccccCc
Confidence 5577777788899999999999998765222 899999 554321 12335899998766 79999999 99995
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|+|.|.|.++. .+..+.|.|++
T Consensus 161 -~Y~C~a~N~~g~---~~~~~~l~V~~ 183 (184)
T 3b5h_A 161 -QYRCNGTSSKGS---DQAIITLRVRS 183 (184)
T ss_dssp -EEEEEEEETTEE---EEEEEEEEEC-
T ss_pred -eEEEEEEeCCCc---ceEEEEEEEec
Confidence 999999999864 34457888865
No 86
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.53 E-value=2.6e-14 Score=104.81 Aligned_cols=95 Identities=22% Similarity=0.315 Sum_probs=76.1
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc--cCC--cEEEeecCCCCCCee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT--TAG--ALHIRDTGMEDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~--~~G--~L~I~~v~~~D~gg~ 82 (114)
.+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ...+.||.+. .+| .|.|.+++.+|+| .
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~--~v~W~~~~~~~----~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~ 76 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKP--IVKWYRQGKEI----IADGLKYRIQEFKGGYHQLIIASVTDDDAT-V 76 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSCC--EEEEEETTEEC----CCCSSSEEEEEETTTEEEEEESSCCGGGCS-E
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCCC--eEEEEECCEEc----ccCCCeEEEEECCCCEEEEEEccCChhhCe-E
Confidence 4678999999999999999999999765444 89999999864 2345677764 344 8999999999996 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|+|.|.|..+. .+..+.|.|..++.+
T Consensus 77 Y~C~a~n~~g~---~~~~~~l~V~~~p~~ 102 (305)
T 2nzi_A 77 YQVRATNQGGS---VSGTASLEVEVPAKI 102 (305)
T ss_dssp EEEEEEETTEE---EEEEEEEEECEEEEE
T ss_pred EEEEEEcCCCC---ccceEEEEEecCCcc
Confidence 99999998543 466788998876543
No 87
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.52 E-value=3.6e-14 Score=98.88 Aligned_cols=86 Identities=16% Similarity=0.150 Sum_probs=69.6
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC-C---cEEEeecCCCCCCeeeEEEE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA-G---ALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~-G---~L~I~~v~~~D~gg~Y~C~a 87 (114)
..|....+.+|.++.|.|.+.+++.+ .+.|+|++..+ ..+.||.+..+ | .|.|.+++.+|+| .|+|.|
T Consensus 122 ~~~~~~~v~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~-----~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a 193 (212)
T 2r15_A 122 GLPDVVTIQEGKALNLTCNVWGDPPP--EVSWLKNEKAL-----AQTDHCNLKFEAGRTAYFTINGVSTADSG-KYGLVV 193 (212)
T ss_dssp BCCSEEEEETTCCEEEEEEEECSSCC--EEEEEETTEEE-----CCCSSEEEEEETTTEEEEEESSCCGGGCE-EEEEEE
T ss_pred cCCCcEEEccCCeEEEEEEEcCCCCc--eEEEEECCeEC-----ccCCCEEEEEcCCCEEEEEEcCcchHHCe-EEEEEE
Confidence 34667789999999999999876554 89999999854 45678877653 4 8999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEecc
Q psy9140 88 THKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|.++. .+..+.|.|..|
T Consensus 194 ~N~~g~---~~~~~~l~V~~P 211 (212)
T 2r15_A 194 KNKYGS---ETSDFTVSVFIP 211 (212)
T ss_dssp EETTEE---EEEEEEEEEECC
T ss_pred EcCCCc---EEEEEEEEEEcc
Confidence 999764 455778888766
No 88
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.52 E-value=3.3e-14 Score=103.36 Aligned_cols=89 Identities=16% Similarity=0.349 Sum_probs=72.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
+.+...|.+..+.+|.++.|.|.+.+++.+ .++|+|++..+ ..+.+|.+..++ .|.|.+++.+|+| .|+
T Consensus 193 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~ 264 (284)
T 2rik_A 193 PVFRKKPHPVETLKGADVHLECELQGTPPF--QVSWHKDKREL-----RSGKKYKIMSENFLTSIHILNVDSADIG-EYQ 264 (284)
T ss_dssp CBCCSCCCCEEECTTCCEEEEEECBSSSCC--EEEEEETTEEE-----CBTTTEEEEEETTEEEEEECSCCGGGCE-EEE
T ss_pred CcceeCCCcceecCCCeEEEEEEEEecCCC--EEEEEECCEEC-----cCCCCEEEEEcCCEEEEEEcCCCcccCE-EEE
Confidence 446677888899999999999999876544 89999999854 456788887654 7999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEec
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|.|.++. .+..+.|.|++
T Consensus 265 C~a~N~~G~---~~~~~~l~V~~ 284 (284)
T 2rik_A 265 CKASNDVGS---YTCVGSITLKA 284 (284)
T ss_dssp EEEEETTEE---EEEEEEEEECC
T ss_pred EEEEeCCCc---eeEEEEEEEcC
Confidence 999999864 45577888864
No 89
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.51 E-value=2e-14 Score=101.65 Aligned_cols=93 Identities=17% Similarity=0.274 Sum_probs=72.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc---CCcEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT---AGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~---~G~L~I~~v~~~D~gg~Y~ 84 (114)
+.| ..|.+..+.+|+++.|.|.+.+.+.+ .+.|+||+..+ ......|+.+.. .+.|.|.+++.+|+| .|+
T Consensus 20 P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p--~i~W~~~g~~l---~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~ 92 (215)
T 3mtr_A 20 PKL-QGPVAVYTWEGNQVNITCEVFAYPSA--TISWFRDGQLL---PSSNYSNIKIYNTPSASYLEVTPDSENDFG-NYN 92 (215)
T ss_dssp EEE-ECCSEEEECTTCCEEEEEEEEEESCC--EEEEEETTEES---SCSSSCSEEEEEETTEEEEEECCCSGGGCE-EEE
T ss_pred Ccc-cCCceEEEECCCCEEEEEEEeecCCC--EEEEEECCeEC---CCCCCccEEEecCCCeeEEEEecCChhhCe-EEE
Confidence 445 68888999999999999999775544 89999999864 222336777763 568999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.|.|..+. .+..+.|.|.+++.
T Consensus 93 C~a~n~~g~---~~~~~~l~v~~~P~ 115 (215)
T 3mtr_A 93 CTAVNRIGQ---ESLEFILVQADTPS 115 (215)
T ss_dssp EEEECSSCE---EEEEEEEEECCCCC
T ss_pred EEEEECCCc---eEEEEEEEECCCCC
Confidence 999999864 34567788775544
No 90
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.51 E-value=1.2e-13 Score=95.54 Aligned_cols=91 Identities=26% Similarity=0.388 Sum_probs=71.8
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee--CCeeeeeeeeccCCcEEEccCC---cEEEeecC-CCCCCe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR--EGVSEARSIIHSGGRYSITTAG---ALHIRDTG-MEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k--d~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~-~~D~gg 81 (114)
+.+...+.+..+.+|.++.|.|.+.+++.+ .++|+| ++..+ .....++||.+..++ .|.|.+++ .+|+|
T Consensus 93 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~g~~~--~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G- 167 (190)
T 2wv3_A 93 PDITGHKRSENKNEGQDAMMYCKSVGYPHP--EWMWRKKENGVFE--EISNSSGRFFIINKENYTELNIVNLQITEDPG- 167 (190)
T ss_dssp CEEEEECSEEEEETTSCEEEEEEEECSSCC--EEEEEEEETTEEE--ECCCTTSCEEEEECSSEEEEEECSCCTTTSCE-
T ss_pred CcccccCCcceeeCCCcEEEEEEeCccCCC--ceEEEEcCCCcee--eeecCCCeEEEecCCCeeEEEEEeccccCCCE-
Confidence 557777888899999999999999776554 899999 66643 122367899987654 69999999 79995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|+|.|.|.++. .+..+.|.|+
T Consensus 168 ~Y~C~a~N~~g~---~~~~~~l~V~ 189 (190)
T 2wv3_A 168 EYECNATNSIGS---ASVSTVLRVR 189 (190)
T ss_dssp EEEEEEECSSCE---EEEEEEEEEE
T ss_pred EEEEEEEecCCc---ceeEEEEEEE
Confidence 999999999864 4556677775
No 91
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.51 E-value=2.2e-14 Score=98.71 Aligned_cols=88 Identities=19% Similarity=0.317 Sum_probs=71.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
+.+...+.+..+.+|.++.|.|.+.+++.+ .++|+|++..+ ..+.+|.+..+| .|.|.+++.+|+| .|+
T Consensus 104 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~ 175 (194)
T 2a38_A 104 PNFVQRLQSMTVRQGSQVRLQVRVTGIPTP--VVKFYRDGAEI-----QSSLDFQISQEGDLYSLLIAEAYPEDSG-TYS 175 (194)
T ss_dssp EEEEECCCCEEECTTEEEEEEEEEEEESCC--EEEEEETTEEC-----CCSSSEEEEEETTEEEEEEEEECGGGCE-EEE
T ss_pred CEEEeCCccEEEcCCCEEEEEEEEEEecCC--eEEEEECCEEC-----CCCCcEEEEEcCCEEEEEECCCChhcCe-EEE
Confidence 446677888899999999999999765444 79999999854 456788887766 6999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEe
Q psy9140 85 CQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|.|.|.++. .+..+.|.|+
T Consensus 176 C~a~n~~g~---~~~~~~l~V~ 194 (194)
T 2a38_A 176 VNATNSVGR---ATSTAELLVQ 194 (194)
T ss_dssp EEEEETTEE---EEEEEEEEEC
T ss_pred EEEEeCCCc---eEEEEEEEEC
Confidence 999998764 4556777764
No 92
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.51 E-value=2.5e-13 Score=88.65 Aligned_cols=97 Identities=23% Similarity=0.365 Sum_probs=70.8
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee--eccCCcEEEccCC------cEEEeecC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI--IHSGGRYSITTAG------ALHIRDTG 75 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~--~~~~~r~~v~~~G------~L~I~~v~ 75 (114)
.....|.+..+.+|++|.|.|.+.+.. + .+.|+|.+ .. ++... ...++||.+..++ .|.|++++
T Consensus 3 ~v~q~p~~~~v~~G~~v~L~C~~~~~~-~--~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 79 (113)
T 1h5b_A 3 QVEQSPSALSLHEGTDSALRCNFTTTM-R--SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQ 79 (113)
T ss_dssp SEEEECSEEEEETTCCEEEEEEESSCC-S--EEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCC
T ss_pred ceEECCCEEEEecCCcEEEEEEECCCC-c--eEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCC
Confidence 455678889999999999999986532 2 79999864 21 11100 1246899986554 89999999
Q ss_pred CCCCCeeeEEEEeeccCC-cEEeCCCeEEEEeccc
Q psy9140 76 MEDSYIRYYCQTTHKLTG-ERKISPPSQVMVSEIA 109 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~~~~ 109 (114)
.+|+| .|.|.+.|..+. .......++|.|.+.+
T Consensus 80 ~~DsG-~Y~C~~~n~~~~~~~~fg~gT~L~V~~~~ 113 (113)
T 1h5b_A 80 LEDSG-TYFCAAEASSGSWQLIFGSGTQLTVMPVT 113 (113)
T ss_dssp GGGCE-EEEEEEECSSSSSSCEECCCEEEEEECCC
T ss_pred hhhCE-EEEEEEecCCCCcEEEECCCcEEEEEECC
Confidence 99995 999999997532 2345668899998754
No 93
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.51 E-value=1e-13 Score=89.12 Aligned_cols=94 Identities=17% Similarity=0.216 Sum_probs=66.0
Q ss_pred ccceeEEEeCCeEEEEeec-CCCCCCc-c-eEEEeeCCeeeeeee--------eccCCcEEEcc--------CCcEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNI-PAYNHNL-L-LIAWLREGVSEARSI--------IHSGGRYSITT--------AGALHIRD 73 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~-~~~~~~~-~-~vsW~kd~~~~~~~~--------~~~~~r~~v~~--------~G~L~I~~ 73 (114)
.|.+..+.+|.+|.|+|.+ .+...+. . .+.|+|++....... ....+|+.+.. +++|.|++
T Consensus 6 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (118)
T 3udw_C 6 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (118)
T ss_dssp CCSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECS
T ss_pred CCCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEee
Confidence 4556889999999999998 4433332 3 599999853211000 12267888876 67999999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
++.+|+| .|+|.+.+.-.+ ..+..+.|.|..++
T Consensus 86 v~~~D~G-~Y~C~v~~~~~~--~~~~~~~L~V~~~P 118 (118)
T 3udw_C 86 LRVEDEG-NYTCLFVTFPQG--SRSVDIWLRVLAKP 118 (118)
T ss_dssp CCGGGCE-EEEEEEEEETTE--EEEEEEEEEEEC--
T ss_pred cChHHCe-EEEEEEEECCCC--CccceEEEEEEeCC
Confidence 9999995 999999984222 35667889888653
No 94
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.51 E-value=7.1e-14 Score=96.14 Aligned_cols=95 Identities=16% Similarity=0.255 Sum_probs=74.2
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee-CCeeeeeeeeccCCcEEEc----cCCcEEEeecCCCCCCeee
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR-EGVSEARSIIHSGGRYSIT----TAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k-d~~~~~~~~~~~~~r~~v~----~~G~L~I~~v~~~D~gg~Y 83 (114)
.|.+.|++..+.+|+++.|.|.+.+.+.+ ..+.|+| |+..+ ...+.||.+. .++.|.|.+++.+|+| .|
T Consensus 4 ~v~~~p~~~~v~~G~~v~l~C~~~~~~~~-~~v~W~~~~g~~~----~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y 77 (191)
T 1epf_A 4 QVDIVPSQGEISVGESKFFLCQVAGDAKD-KDISWFSPNGEKL----SPNQQRISVVWNDDDSSTLTIYNANIDDAG-IY 77 (191)
T ss_dssp CEEEESSSEEEETTCCEEEEEEECCCSCC-CEEEEECTTSCEE----CCBSSSEEEEEEETTEEEEEECSCCGGGCE-EE
T ss_pred EEEecCCCcEEcCCCCEEEEEECCCCCCC-ceEEEEeCCCccc----cCCCCeEEEEECCCCceEEEEccCCcccCE-EE
Confidence 57889999999999999999999775421 2899999 77653 2356788875 3478999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+|.+.|..++ ..+....|.|..++.+
T Consensus 78 ~C~~~~~~~~--~~~~~~~l~v~~~p~~ 103 (191)
T 1epf_A 78 KCVVTAEDGT--QSEATVNVKIFQKLMF 103 (191)
T ss_dssp EEEEEETTTE--EEEEEEEEEEECCSEE
T ss_pred EEEEEcCCCc--ceEEEEEEEeecCceE
Confidence 9999998643 3555778888766544
No 95
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.51 E-value=1.1e-13 Score=97.33 Aligned_cols=94 Identities=19% Similarity=0.298 Sum_probs=75.2
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc--CC--cEEEeecCC-CCCC
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT--AG--ALHIRDTGM-EDSY 80 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~--~G--~L~I~~v~~-~D~g 80 (114)
-.+.|...|++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ ...+.||.+.. +| .|.|.+++. +|+|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~--~v~W~~~~~~~----~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G 78 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPP--SIVWRKNGKKV----SGTQSRYTVLEQPGGISILRIEPVRAGRDDA 78 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCC--EEEEEETTEEC----CTTSTTEEEEEETTTEEEEEESSCCTTTTCS
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCC--eEEEEECCEEC----CCCcceeEEEEcCCCeEEEEEEecCCCCcCc
Confidence 35678999999999999999999999765444 89999999864 23567888753 44 799999999 9995
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|+|.|.|..+.. .+..+.|.|..+
T Consensus 79 -~Y~C~~~n~~g~~--~~~~~~l~V~~~ 103 (212)
T 2yd1_A 79 -PYECVAENGVGDA--VSADATLTIYEG 103 (212)
T ss_dssp -EEEEEEECSSSCE--EEEEEEEEEECT
T ss_pred -eEEEEEEeCCCCe--EEeeEEEEEecc
Confidence 9999999987542 455778888764
No 96
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.51 E-value=1.3e-14 Score=110.07 Aligned_cols=91 Identities=14% Similarity=0.250 Sum_probs=76.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|.+..+.+|.++.|.|.+.+++.+ .++|+|++..+ ..+.++.+..++.|.|.+++.+|+| .|+|.|
T Consensus 313 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~v~W~~~g~~~-----~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a 384 (403)
T 3laf_A 313 PWFLNHPSNLYAYESMDIEFECAVSGKPVP--TVNWMKNGDVV-----IPSDYFQIVGGSNLRILGVVKSDEG-FYQCVA 384 (403)
T ss_dssp EEEEECCCCEECCTTCCEEECCEEEEESCC--EEEEEETTEEC-----CCSSSEEEETTTEEEESSCCGGGCE-EEEEEE
T ss_pred CcEeecCcceEEecCCeEEEEEEEeeccCC--EEEEEECCEEC-----CCCCcEEEecCccEEEeccccccCE-EEEEEE
Confidence 457788888999999999999999776544 89999999853 4567888888899999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.++. .+..+.|.|++|+
T Consensus 385 ~N~~G~---~~~~~~l~V~~P~ 403 (403)
T 3laf_A 385 ENEAGN---AQSSAQLIVPKPA 403 (403)
T ss_dssp EETTEE---EEEEEEEECCCC-
T ss_pred EcCCce---EEEEEEEEEeCCC
Confidence 999864 4667899999874
No 97
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.50 E-value=1.5e-14 Score=103.93 Aligned_cols=86 Identities=10% Similarity=0.104 Sum_probs=64.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCC-CCCcceEEEeeCCeeeeeeeeccCCcEEEcc-CCcEEEeecCCCCCCeeeEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAY-NHNLLLIAWLREGVSEARSIIHSGGRYSITT-AGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~-~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~-~G~L~I~~v~~~D~gg~Y~C 85 (114)
+.|...+ +..+.+|.++.|.|.+.+. +.+ .++|+||+..+ ..+.||.... .+.|.|.+++.+|+| .|+|
T Consensus 118 P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p--~i~W~k~g~~l-----~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C 188 (207)
T 3rbs_A 118 PHFVEYL-SWEVTGECNVLLKCKVANIKKET--HIVWYKDEREI-----SVDEKHDFKDGICTLLITEFSKKDAG-IYEV 188 (207)
T ss_dssp SEEEEEE-EEEEETTTEEEEEEEEESCCTTC--EEEEEETTEEE-----CCCCCCCCSSEEEEEEETTCCGGGCE-EEEE
T ss_pred CceEecC-CcEEcCCCcEEEEEEEeCCCCCC--EEEEEECCEEC-----CCCCceEcCCCEEEEEECCCCcccCE-EEEE
Confidence 3454444 6889999999999999765 333 89999999864 3455764432 236999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEE
Q psy9140 86 QTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V 105 (114)
.|.|.++. .+..++|.+
T Consensus 189 ~a~N~~G~---~~~~~~L~~ 205 (207)
T 3rbs_A 189 ILKDDRGK---DKSRLKLVD 205 (207)
T ss_dssp EEEETTEE---EEEEEEECC
T ss_pred EEEcCCCE---EEEEEEEec
Confidence 99999864 455666654
No 98
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.50 E-value=1.1e-13 Score=104.85 Aligned_cols=101 Identities=22% Similarity=0.324 Sum_probs=79.8
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeec-----CCCCCC
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDT-----GMEDSY 80 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v-----~~~D~g 80 (114)
....|..+|++..+.+|+++.|.|.+.+.... ..+.|+||+..+ ....+.|+.+..+|.|.|.++ +.+|+
T Consensus 20 ~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~-~~v~W~k~g~~~---~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~- 94 (403)
T 3laf_A 20 RSLHFVSEPSDAVTMRGGNVLLNCSAESDRGV-PVIKWKKDGLIL---ALGMDDRKQQLPNGSLLIQNILHSRHHKPDE- 94 (403)
T ss_dssp CSSEEEECCCCEEECTTCCEEECCEEECTTCC-CEEEEEETTEEC---CTTSCTTEEECTTSCEEECSCCCBTTBCSSC-
T ss_pred eeEEEEeCCCceEEecCCcEEEEEEcCCCCCC-ceEEEEECCEEC---ccCCcccEEEecCCcEEEeeeeccCCCCCcc-
Confidence 34668999999999999999999998653111 189999999865 234578999999999999999 77899
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
|.|+|.|.|...+ ...+..+.|.|..|..++
T Consensus 95 G~Y~C~~~~~~~~-~~~s~~~~l~v~~p~~~~ 125 (403)
T 3laf_A 95 GLYQCEASLGDSG-SIISRTAKVMVAGPLRFL 125 (403)
T ss_dssp EEEEEEEECGGGC-EEECCCEEEEECCCCEEC
T ss_pred eEEEEEEEeCCCc-cEEEEEEEEEecCCCccc
Confidence 5999999976444 345668899998776554
No 99
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.50 E-value=4.2e-14 Score=110.98 Aligned_cols=95 Identities=14% Similarity=0.218 Sum_probs=73.1
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|.+..+.+|.++.|.|.+ +.+.+ .++|.++++.++. ....++|+.+..+|+|.|.+|+.+|+| .|+|.|
T Consensus 342 P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p--~i~W~~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C~a 416 (440)
T 3zyj_A 342 PVIVEPPADLNVTEGMAAELKCRA-STSLT--SVSWITPNGTVMT-HGAYKVRIAVLSDGTLNFTNVTVQDTG-MYTCMV 416 (440)
T ss_dssp CCEEECCCCEEECTTSCCEECCEE-SSTTS--EEEEECTTSCEEE-SSSCCSSEEECTTCCEEESSCCSTTCE-EEEEEE
T ss_pred CcccccccceeeccCceEEEEeec-CCCCC--ceEEEeCCCceee-ccCCCceEEEccCCeEEEccCChhhCE-EEEEEE
Confidence 456777889999999999999999 43333 8999997665432 122356999999999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEecccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.|..+. .+..+.+.|.+++.
T Consensus 417 ~N~~G~---~~~~~~~~v~~~~~ 436 (440)
T 3zyj_A 417 SNSVGN---TTASATLNVTGTHH 436 (440)
T ss_dssp ECSSCE---EEEEEEEEEC----
T ss_pred EcCCCc---EEEEEEEEEecccc
Confidence 999764 56678888887653
No 100
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.50 E-value=2.9e-13 Score=87.55 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=67.4
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeeee----eccCCcEEEccC---CcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARSI----IHSGGRYSITTA---GALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~~----~~~~~r~~v~~~---G~L~I~~v~~~ 77 (114)
+...|++..+.+|.+|.|.|.+.+.+.+ .+.|+|++. .++... ....+||.+..+ ..|.|++++.+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISK--SLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPE 81 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTT
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCc--eEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHH
Confidence 4556888999999999999999765433 799999642 121100 012579988643 47999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+| .|.|.|.|. ........++|.|+
T Consensus 82 DsG-~Y~C~~~n~--~~~~fg~gt~L~V~ 107 (108)
T 1jhl_L 82 DFA-MYICQQHNE--YPWTFGGGTKLEIK 107 (108)
T ss_dssp CCS-EEEEEECSS--SSCEECCCEEEEEC
T ss_pred HCE-EEEEEEccC--CccEECCCEEEEEE
Confidence 996 999999996 23345678899886
No 101
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.50 E-value=5.5e-14 Score=90.90 Aligned_cols=80 Identities=8% Similarity=0.055 Sum_probs=61.7
Q ss_pred EeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEE----c----cCCcEEEeecCCCCCCeeeEEEEeecc
Q psy9140 20 LRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSI----T----TAGALHIRDTGMEDSYIRYYCQTTHKL 91 (114)
Q Consensus 20 ~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v----~----~~G~L~I~~v~~~D~gg~Y~C~a~n~l 91 (114)
..|..+.|.|.+.+++.| .++|+||+..+ ..+.++.+ . .+|.|.|.+++.+|+| .|+|.|.|.+
T Consensus 14 ~~~~~~~~~c~v~G~P~P--~i~W~k~g~~l-----~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C~A~N~~ 85 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKP--ALQWFYNGAIL-----NESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG-DYTLIAKNEY 85 (103)
T ss_dssp CCCCEEEEEEEEECSSCC--EEEEEETTEEE-----CCCSSEEEEEEEECSSEEEEEEEEESCCGGGCE-EEEEEEECSS
T ss_pred eECcEEEEEEEEEEeCCC--EEEEEECCEEC-----CCCCcEeEEEEecCCcEEEEEEEECCCCcccCE-EEEEEEEeCC
Confidence 468899999999887666 89999999864 33344311 1 1345999999999995 9999999998
Q ss_pred CCcEEeCCCeEEEEecccc
Q psy9140 92 TGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 92 ~~~~~~s~~a~L~V~~~~~ 110 (114)
+. .+..++|.|.+++.
T Consensus 86 G~---~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 86 GK---DEKQISAHFMGWPG 101 (103)
T ss_dssp CE---EEEEEEECCSCCCC
T ss_pred Cc---EeEEEEEEECCCCC
Confidence 74 56678888887765
No 102
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.50 E-value=6.5e-14 Score=96.40 Aligned_cols=92 Identities=20% Similarity=0.251 Sum_probs=73.6
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee-CCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR-EGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k-d~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
.|.+.|++..+.+|+++.|.|.+.+. |. .+.|+| ++.. +..++|+.+..+| .|.|.+++.+|+| .|+
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~--p~-~v~W~~~~~~~-----~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~ 74 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGE--PE-SIDWYNPQGEK-----IISTQRVVVQKEGVRSRLTIYNANIEDAG-IYR 74 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEEC--CS-EEEEECTTSCB-----CCCCSSEEEEEETTEEEEEECSCCGGGCE-EEE
T ss_pred EEEecCCceEEecCCcEEEEEEeecC--Ce-eEEEEeCCCCc-----cCCCceEEEECCCCeEEEEEccCCcccCe-EEE
Confidence 57889999999999999999999654 22 799999 5553 3467899888777 8999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|.+.|..+.. .+....|.|..++.+
T Consensus 75 C~~~~~~g~~--~~~~~~l~v~~~p~~ 99 (189)
T 2v44_A 75 CQATDAKGQT--QEATVVLEIYQKLTF 99 (189)
T ss_dssp EEEECTTSCE--EEEEEEEEEECCCEE
T ss_pred EEEEeCCCCc--EEEEEEEEEecCCce
Confidence 9999986542 355778888766543
No 103
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.49 E-value=1.1e-13 Score=94.14 Aligned_cols=99 Identities=17% Similarity=0.287 Sum_probs=69.9
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeeeeccCCcEEEccCCc---EEEeecCCCCCCe
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSIIHSGGRYSITTAGA---LHIRDTGMEDSYI 81 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~~~~~~r~~v~~~G~---L~I~~v~~~D~gg 81 (114)
.+.+...|++..+.+|++|.|.|.+.+. + .+.|+|+. ..+.. ....++||.+..+|. |.|++++.+|+|
T Consensus 17 ~~~v~q~p~~~~v~~G~~v~L~C~~~~~--~--~v~W~r~~~g~~~~~-l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG- 90 (133)
T 3khq_A 17 CSQIWQHPRFAAKKRSSMVKFHCYTNHS--G--ALTWFRKRGSQQPQE-LVSEEGRIVQTQNGSVYTLTIQNIQYEDNG- 90 (133)
T ss_dssp CCSEEEECSEEEECTTCCEEEEEEESSS--S--CEEEEEECTTSCCEE-CCCTTTTEEEEEETTEEEEEECSCCGGGCE-
T ss_pred CCceEEcCceEEEeCCCeEEEEEEeCCC--C--EEEEEEeCCCCCCEE-EEEeCCCEEEEcCCCEEEEEECCCChHHCE-
Confidence 3456778999999999999999999765 3 68999973 22100 123578999876664 999999999995
Q ss_pred eeEEEEeeccCC-cEEeCCCeEEEEeccccc
Q psy9140 82 RYYCQTTHKLTG-ERKISPPSQVMVSEIALP 111 (114)
Q Consensus 82 ~Y~C~a~n~l~~-~~~~s~~a~L~V~~~~~~ 111 (114)
.|.|.+.|..+. ....+..++|.|.+++.+
T Consensus 91 ~Y~C~a~n~~g~~~~~~g~gt~L~V~~~p~~ 121 (133)
T 3khq_A 91 IYFCKQKCDSANHNVTDSCGTELLVLGFSTL 121 (133)
T ss_dssp EEEEEESSCC-------CCCEEEEEC-----
T ss_pred EEEEEEEeCCCCcceeECCCEEEEEEecccc
Confidence 999999997532 223467899999976543
No 104
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.49 E-value=2.4e-14 Score=112.72 Aligned_cols=87 Identities=22% Similarity=0.343 Sum_probs=68.0
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeecc
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKL 91 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l 91 (114)
..|++..|.+|.+|.|.|.+.+.+.| .++|.|++..+. .....+|+.+.++|.|.|.+|+.+|+| .|+|.|.|..
T Consensus 390 ~~~~~~~v~~G~~v~l~C~~~g~P~p--~i~W~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a~N~~ 464 (477)
T 2id5_A 390 RKAQQVFVDEGHTVQFVCRADGDPPP--AILWLSPRKHLV--SAKSNGRLTVFPDGTLEVRYAQVQDNG-TYLCIAANAG 464 (477)
T ss_dssp CSCEEEEEETTCCEEECCCEEEESCC--EEEEECTTSCBC---------CEECTTSCEEESSCCSTTCE-EEEEEEEETT
T ss_pred cccccEEEeCCCeEEEEEeccccCCC--EEEEEECCcccc--ccCCCceEEeCCCCEEEEeeCChHHCE-EEEEEEEeCC
Confidence 34688899999999999999776555 899999998652 123568999999999999999999995 9999999987
Q ss_pred CCcEEeCCCeEEEEe
Q psy9140 92 TGERKISPPSQVMVS 106 (114)
Q Consensus 92 ~~~~~~s~~a~L~V~ 106 (114)
+. .+..++|.|+
T Consensus 465 g~---~~~~~~l~V~ 476 (477)
T 2id5_A 465 GN---DSMPAHLHVR 476 (477)
T ss_dssp EE---EEEEEEEEEE
T ss_pred Cc---EEEEEEEEEe
Confidence 54 4667788876
No 105
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.49 E-value=3.3e-14 Score=114.52 Aligned_cols=94 Identities=15% Similarity=0.296 Sum_probs=77.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
+.|...|.+..+.+|.++.|.|.+.+.+.+ .++|+||+..+ ..+.||.+..++ .|.|.+|+.+|+| .|+
T Consensus 385 P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p--~v~W~k~g~~l-----~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~ 456 (570)
T 3b43_A 385 PVFRKKPHPVETLKGADVHLECELQGTPPF--QVSWHKDKREL-----RSGKKYKIMSENFLTSIHILNVDSADIG-EYQ 456 (570)
T ss_dssp CEECSCCCCEEECTTCCEEEEEEEESSSSC--CCEEEETTEEC-----CSSSSEEEEEETTEEEEEECSCCGGGCE-EEE
T ss_pred CeeecCCCceeecCCCEEEEEEEEecCCCC--EEEEEECCEEC-----cCCCCEEEEEcCCEEEEEECCCChhhCE-EEE
Confidence 447778889999999999999999876544 79999999853 467788887543 7999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
|.|.|.++. .+..+.|.|+.|+.++
T Consensus 457 C~A~N~~G~---~~~~~~l~v~~~P~~~ 481 (570)
T 3b43_A 457 CKASNDVGS---DTCVGSITLKAPPRFV 481 (570)
T ss_dssp EEEECSSCE---EEEEEEEEECCCCEEE
T ss_pred EEEEECCCe---EEEEEEEEeccCCccc
Confidence 999999875 3457889999887764
No 106
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.49 E-value=7e-14 Score=107.68 Aligned_cols=89 Identities=16% Similarity=0.238 Sum_probs=70.5
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeecc
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKL 91 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l 91 (114)
+.+.+..+.+|++|.|.|.+.+ +.+ .++|.|++..++.. ...+.||.+ .+|.|.|.+|+.+|+| .|+|.|.|..
T Consensus 251 ~~~~~v~v~~G~~~~l~C~~~g-p~p--~i~W~~~~~~~~~~-~~~~~r~~~-~~~~L~I~~v~~~D~G-~Y~C~a~N~~ 324 (361)
T 2xot_A 251 YKESAWEAHLGDTLTIRCDTKQ-QGM--TKVWVSPSNEQVLS-QGSNGSVSV-RNGDLFFKKVQVEDGG-VYTCYAMGET 324 (361)
T ss_dssp CCCCCCEEETTCCEEECCCCSS-TTC--EEEEECTTSCBCCS-CCSSSSEEE-ETTEEEESSCCTTSCE-EEEEEEECSS
T ss_pred ccccCceecCCCeEEEEeEeeC-CCC--eEEEEeCCCeeEee-cccCCceEe-ecCeEEEeecCcccCE-EEEEEEecCC
Confidence 4577889999999999999976 433 78999987754321 133468999 8999999999999995 9999999986
Q ss_pred CCcEEeCCCeEEEEeccc
Q psy9140 92 TGERKISPPSQVMVSEIA 109 (114)
Q Consensus 92 ~~~~~~s~~a~L~V~~~~ 109 (114)
+. .+..+.|.|.+++
T Consensus 325 g~---~~~~~~l~V~~~~ 339 (361)
T 2xot_A 325 FN---ETLSVELKVYNFT 339 (361)
T ss_dssp CE---EEEEEEEEEESSC
T ss_pred Cc---cEEEEEEEEEeee
Confidence 53 4567888887654
No 107
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.49 E-value=7.6e-14 Score=96.07 Aligned_cols=88 Identities=18% Similarity=0.211 Sum_probs=68.4
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...+.+..+.+|.++.|.|.+.+++.+ .++|+|++..+ ..+ ......++.|.|.+++.+|+| .|+|.|
T Consensus 114 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~-----~~~-~~~~~~~~~L~i~~v~~~d~G-~Y~C~a 184 (201)
T 3s97_C 114 ADIVVQFKDVYALMGQNVTLECFALGNPVP--DIRWRKVLEPM-----PST-AEISTSGAVLKIFNIQLEDEG-IYECEA 184 (201)
T ss_dssp EEEEEECCCEEEETTCCEEEEEEEEEESCC--EEEEEETTBCC-----CTT-CEEETTTTEEEECSCCGGGCE-EEEEEE
T ss_pred CceEecCCceEEecCCcEEEEEEccCCCCC--ceEEEeCCCcC-----CCc-eeecCCCCEEEEccCChhhCE-EEEEEE
Confidence 346677778899999999999999765444 89999999853 223 333445789999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEec
Q psy9140 88 THKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|.++. .+..+.|.|++
T Consensus 185 ~n~~g~---~~~~~~l~V~a 201 (201)
T 3s97_C 185 ENIRGK---DKHQARIYVQA 201 (201)
T ss_dssp EETTEE---EEEEEEEEEEC
T ss_pred EecCCc---eeeeEEEEEeC
Confidence 998764 45577888763
No 108
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.48 E-value=2.4e-13 Score=100.22 Aligned_cols=91 Identities=14% Similarity=0.295 Sum_probs=69.0
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc--cCC---cEEEeecCC-CCC
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT--TAG---ALHIRDTGM-EDS 79 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~--~~G---~L~I~~v~~-~D~ 79 (114)
..+.|...|++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ .+.|+.+. .+| .|.|.+++. +|+
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~--~i~W~k~g~~i------~~~~~~~~~~~~~~~~~L~i~~~~~~~D~ 76 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKP--RVTWNKKGKKV------NSQRFETIEFDESAGAVLRIQPLRTPRDE 76 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCC--EEEEC-------------CTTEEEEEETTTTEEEEEECSCCTTTTC
T ss_pred cCCeeeecCCceEecCCCeEEEEEEEEEeCCC--eEEEEECCEEC------CCCceEEEEecCCCceEEEEecccccCCC
Confidence 45679999999999999999999999765444 89999999853 34566654 344 599999998 999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
| .|+|.|.|..+. .+..+.|.|..+
T Consensus 77 G-~Y~C~a~n~~g~---~~~~~~l~V~~~ 101 (304)
T 2yd9_A 77 N-VYECVAQNSVGE---ITVHAKLTVLRE 101 (304)
T ss_dssp S-EEEEEEECSSCE---ECCEEEEEEECG
T ss_pred e-EEEEEEECCCCe---EEEEEEEEEecc
Confidence 5 999999998653 577889999865
No 109
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.48 E-value=8e-14 Score=101.38 Aligned_cols=97 Identities=21% Similarity=0.249 Sum_probs=76.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|...|.+..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ....+.||.+..+|.|.|.+++.+|+| .|+|.|
T Consensus 101 ~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~--~v~W~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a 174 (291)
T 1qz1_A 101 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPP--TIIWKHKGRDV---ILKKDVRFIVLSNNYLQIRGIKKTDEG-TYRCEG 174 (291)
T ss_dssp SEEEECCSSEEEETTSCEEECCEEECSSCC--EEEEEETTSCS---STTCCTTEEECTTSCEEETTCCGGGCE-EEEEEE
T ss_pred ccccCCCCcccccCCCeEEEEEEeccCCCC--EEEEEECCEEc---ccCCCceEEEccCCcEEEccCccccCe-EEEEEE
Confidence 446778888999999999999999776444 89999999864 234578999999999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|..++. ..+....|.|..++.+
T Consensus 175 ~n~~~~~-~~~~~~~l~v~~~p~~ 197 (291)
T 1qz1_A 175 RILARGE-INFKDIQVIVNVPPTV 197 (291)
T ss_dssp EEGGGTE-EEEEEEEEEEEEEEEE
T ss_pred EecCCCc-eeeEEEEEEEecCCcc
Confidence 9986553 2233566777655443
No 110
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=101.16 Aligned_cols=85 Identities=18% Similarity=0.182 Sum_probs=70.3
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC-C---cEEEeecCCCCCCeeeEEEEe
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA-G---ALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~-G---~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
.|....+.+|+++.|.|.+.+++.+ .+.|+|++..+ ..+.||.+..+ | .|.|.+++.+|+| .|+|.|.
T Consensus 228 ~~~~~~v~~g~~~~l~C~~~g~p~p--~i~W~~~g~~~-----~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a~ 299 (317)
T 2y25_A 228 LPDVVTIQEGKALNLTCNVWGDPPP--EVSWLKNEKAL-----ASDDHCNLKFEAGRTAYFTINGVSTADSG-KYGLVVK 299 (317)
T ss_dssp CCSEEEEETTSBBCEEEEEECSSCC--EEEEEESSSEE-----CCCSSEEECCBTTTEEEEEEBSCCSTTCE-EEEEEEE
T ss_pred CCccEEEEcCCEEEEEEEEecCCCC--EEEEEECCEeC-----CCCCcEEEEEcCCCEEEEEECCCCHHHCE-EEEEEEE
Confidence 3556789999999999999876544 89999999854 56778888765 6 8999999999995 9999999
Q ss_pred eccCCcEEeCCCeEEEEecc
Q psy9140 89 HKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 89 n~l~~~~~~s~~a~L~V~~~ 108 (114)
|..+. .+..+.|.|..|
T Consensus 300 N~~g~---~~~~~~l~V~~P 316 (317)
T 2y25_A 300 NKYGS---ETSDFTVSVFIP 316 (317)
T ss_dssp ETTEE---EEEEEEEEEECC
T ss_pred eCCCe---EEEEEEEEEEcC
Confidence 99764 466788888765
No 111
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.47 E-value=4.8e-14 Score=108.04 Aligned_cols=92 Identities=18% Similarity=0.304 Sum_probs=70.6
Q ss_pred ccceeeccceeEE---EeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeec-CCCCCCee
Q psy9140 7 SSDYEINTGNTFV---LRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDT-GMEDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d~~v---~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v-~~~D~gg~ 82 (114)
.|.|..+|++..+ .+|+.+.|.|.+.+++.+ .++|+||+..+ ....+.||.+ .+|.|.|.++ +.+|+ |.
T Consensus 5 ~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p--~i~W~k~g~~l---~~~~~~~~~~-~~g~l~i~~~~~~~D~-G~ 77 (384)
T 3kld_A 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKP--HIRWKLNGTDV---DIGMDFRYSV-VDGSLLINNPNKTQDA-GT 77 (384)
T ss_dssp EEEEEECCCCEEEETTCSCSEEEECCEEEEESCC--EEEEEETTEEC---CC----CEEE-ETTEEEEESCCHHHHC-EE
T ss_pred CCEEEeCCcceEeecCCCCCeEEEEeEecCCCCC--EEEEEECCEEC---cCCCCccEEE-ECCEEEEcCCCCcccC-EE
Confidence 4679999999987 689999999999776555 89999999865 2234567766 4899999997 78899 59
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+|.|.|..+. ..+..+.|.|..
T Consensus 78 Y~C~A~N~~G~--~~s~~~~l~v~~ 100 (384)
T 3kld_A 78 YQCIATNSFGT--IVSREAKLQFAY 100 (384)
T ss_dssp EEEEEEETTEE--EECCCEEEEEEE
T ss_pred EEEEEEcCccc--EEecceEEEEec
Confidence 99999998753 346677777754
No 112
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.47 E-value=3.3e-13 Score=94.62 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=69.3
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeee-------eccCCcEEEccCC---cEEEeecCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSI-------IHSGGRYSITTAG---ALHIRDTGM 76 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~-------~~~~~r~~v~~~G---~L~I~~v~~ 76 (114)
.+...|++..+.+|++|.|.|.+.+.+.+ .+.|+|++ ..+.... ...++||.+..++ .|.|.+|+.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISS--YLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC 80 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCc--eEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh
Confidence 45566889999999999999999765333 89999953 2111000 0125799887544 799999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+|+| .|+|.|.|..+.....+..+.|.|..
T Consensus 81 ~D~G-~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 81 ADAA-TYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp GGCE-EEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred HHCE-EEEEecCCCCceeEEeCCCeEEEEeC
Confidence 9995 99999999765322456677888854
No 113
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.47 E-value=2.8e-13 Score=94.24 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=70.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeee--------------eeeccCCcEEEccCCcEEEeecC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEAR--------------SIIHSGGRYSITTAGALHIRDTG 75 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~--------------~~~~~~~r~~v~~~G~L~I~~v~ 75 (114)
+.+.|....+.+|+++.|.|...+...+ .+.|+|++..... ......+|+.+..+|.|.|.+++
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~~~~~~~--~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~ 79 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHNLPLALG--AFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMIT 79 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEECCCSSCS--EEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCC
T ss_pred ccccCccceeecCCcEEEEEeCCCCCce--EEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEcccc
Confidence 5778888999999999999997553222 8999998542100 00113679999999999999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.+|+| .|+|.+.|..++ ..+....|.|.++
T Consensus 80 ~~D~G-~Y~C~~~~~~~~--~~~~~~~l~V~~~ 109 (208)
T 3r4d_A 80 MKDMG-VYTLDMTDENYR--RTQATVRFHVHQP 109 (208)
T ss_dssp GGGCE-EEEEEEECSSCE--EEEEEEEEEEECC
T ss_pred ccCCe-EEEEEEEcccCc--eeEEEEEEEeccC
Confidence 99995 999999997433 3455777888765
No 114
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.47 E-value=1.4e-13 Score=98.01 Aligned_cols=90 Identities=17% Similarity=0.303 Sum_probs=66.7
Q ss_pred ceeeccceeEEE-eCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc-cCCcEEEeecCCCCCCeeeEEE
Q psy9140 9 DYEINTGNTFVL-RGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT-TAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 9 ~~~v~~~d~~v~-~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
.++++|++..+. +|.++.|.|.+.+.+.+ .++|.|+... . ..++.... .++.|.|.+|+.+|+| .|+|.
T Consensus 2 ~v~i~p~~~~~~~~G~~v~L~C~~~g~P~p--~i~W~~~~~~----~--~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C~ 72 (202)
T 1vca_A 2 KIETTPESRYLAQIGDSVSLTCSTTGCESP--FFSWRTQIDS----P--LNGKVTNEGTTSTLTMNPVSFGNEH-SYLCT 72 (202)
T ss_dssp EEEEESSSEEEEETTSCEEEEEEEESCSSC--EEEEEETTCC----C--CSSEEEEETTEEEEEESSCCGGGCS-EEEEE
T ss_pred eEEECCCCcEEEcCCCcEEEEEeecCCCCC--eEEEECCCCC----C--ccceEEEcCCccEEEECcCCHHHCE-EEEEE
Confidence 367888888766 99999999999876544 7999995431 1 12333322 3467999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEecccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.|..+ ..+..+.|.|..++.
T Consensus 73 a~n~~~---~~~~~~~l~V~~~p~ 93 (202)
T 1vca_A 73 ATCESR---KLEKGIQVEIYSFPK 93 (202)
T ss_dssp EEETTE---EEEEEEEEEEEBCCS
T ss_pred EEECCc---eEeeEEEEEEEeCCC
Confidence 999753 356688999987654
No 115
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.47 E-value=3.6e-14 Score=111.73 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=71.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|++..+.+|.+++|+|.+. +.| .++|.++++.++. ....++|+.+..+|+|.|.+|+.+|+| .|+|.|
T Consensus 353 P~i~~~~~~~~v~~G~~~~l~C~~~--p~p--~i~W~~~~~~~~~-~~~~~~~~~~~~~g~L~i~~v~~~D~G-~Y~C~a 426 (452)
T 3zyi_A 353 PFIMDAPRDLNISEGRMAELKCRTP--PMS--SVKWLLPNGTVLS-HASRHPRISVLNDGTLNFSHVLLSDTG-VYTCMV 426 (452)
T ss_dssp CCCSBCCCCEECCTTSCCEECCBCC--TTS--EEEEECTTSCEEC-SSCCCSSCEECTTSCEECSSCCTTCCE-EEEEEE
T ss_pred cccccccccccccCCCEEEEEEeCC--CCC--cEEEEeCCCcEec-cCCCCCCEEECCCCeEEEeecCHHHCE-EEEEEE
Confidence 4566788899999999999999985 333 8999997665321 122456999999999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|..+. .+..+.|.|.+....
T Consensus 427 ~N~~G~---~~~~~~l~v~~~~~~ 447 (452)
T 3zyi_A 427 TNVAGN---SNASAYLNVSTAGTH 447 (452)
T ss_dssp ECSSCE---EEEEEEEEC------
T ss_pred EcCCCc---EEEEEEEEEEccccc
Confidence 998764 466788888876653
No 116
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.47 E-value=1.3e-13 Score=95.70 Aligned_cols=98 Identities=10% Similarity=0.113 Sum_probs=74.5
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeee-------eeeccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEAR-------SIIHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~-------~~~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
.|...|.+..+.+|.++.|.|.+.+.+.+ .+.|+|++..+.. .....+.|+.+. ++.|.|.+++.+|+|
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~G- 78 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSSP--RVEWKFVQGSTTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDNG- 78 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSSE--EEEEEEEETTEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGCE-
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCCc--EEEEEECCCceeeEEecCCcccccccCcEEee-ceeEEEcccCcccCe-
Confidence 46778889999999999999999764322 8999999875321 012346788877 499999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|+|.|.|..+ ....+....|.|..++.+
T Consensus 79 ~Y~C~~~~~~g-~~~~~~~~~l~V~~~p~~ 107 (212)
T 1f97_A 79 EYTCMVSEEGG-QNYGEVSIHLTVLVPPSK 107 (212)
T ss_dssp EEEEEEEETTS-SSEEEEEEEEEEEBCCCC
T ss_pred EEEEEEEccCC-CcccEEEEEEEEEcCCCC
Confidence 99999999754 223455778888876654
No 117
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.47 E-value=7.6e-14 Score=95.56 Aligned_cols=79 Identities=9% Similarity=0.076 Sum_probs=61.5
Q ss_pred eCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEE--c--------cCCcEEEeecCCCCCCeeeEEEEeec
Q psy9140 21 RGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSI--T--------TAGALHIRDTGMEDSYIRYYCQTTHK 90 (114)
Q Consensus 21 ~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v--~--------~~G~L~I~~v~~~D~gg~Y~C~a~n~ 90 (114)
+|..+.|.|.+.|+++| .|+|+|||..| ..+.|+.+ . ..|.|.|.+++.+|+| .|+|.|.|.
T Consensus 14 ~~~~~~l~c~v~G~P~P--~I~W~knG~~l-----~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G-~YtC~A~N~ 85 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAP--SLRWLFNGSVL-----NETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNG-NYTLLAANP 85 (126)
T ss_dssp CCCEEEEEEEECCSSCC--EEEEEETTEEC-----CCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCE-EEEEEEEET
T ss_pred cCccEEEEEEEeeeCCC--eEEEEECCEEC-----CCCCceeEEEeeccccccccceEEEECcCCCCCCE-EEEEEEEEC
Confidence 78899999999998776 89999999864 34455432 1 1478999999999995 999999999
Q ss_pred cCCcEEeCCCeEEEEecccc
Q psy9140 91 LTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 91 l~~~~~~s~~a~L~V~~~~~ 110 (114)
++. .+..+.|.|.+.+.
T Consensus 86 ~G~---~~~t~~l~v~~~P~ 102 (126)
T 1he7_A 86 FGQ---ASASIMAAFMDNPF 102 (126)
T ss_dssp TEE---EEEEEEECCCSCTT
T ss_pred CCe---EEEEEEEEEEcCCC
Confidence 874 45567777765443
No 118
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=5.9e-14 Score=91.86 Aligned_cols=93 Identities=8% Similarity=0.048 Sum_probs=64.1
Q ss_pred ccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc-------cCCcEEEeecCCC
Q psy9140 5 DMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT-------TAGALHIRDTGME 77 (114)
Q Consensus 5 vv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-------~~G~L~I~~v~~~ 77 (114)
|..++.-+..++..+ +..+.|.|.+.+++.+ .+.|+||+..+ ..+.++.+. .++.|.|.+++.+
T Consensus 5 V~~pP~i~~~~~~~~--~~~~~l~C~~~g~P~p--~i~W~k~g~~l-----~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 75 (118)
T 1wwc_A 5 VYYPPRVVSLEEPEL--RLEHCIEFVVRGNPPP--TLHWLHNGQPL-----RESKIIHVEYYQEGEISEGCLLFNKPTHY 75 (118)
T ss_dssp CCCCCCCCCCCCCCC--CCEEEEEEEEECSSCC--EEEEEETTEEC-----CCSSSEEEEEEECSSEEEEEEEEESCCGG
T ss_pred EecCCceeccCCCee--ccceEEEEEeeeeCCC--eEEEEECCEEC-----CCCCceeEEEeccCccccEEEEECCCChh
Confidence 333443333344433 3667899999886555 89999999864 334444442 3578999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|+| .|+|.|.|.++. .+..+.|.|.+++.
T Consensus 76 d~G-~Y~C~a~N~~G~---~~~~~~l~v~~~P~ 104 (118)
T 1wwc_A 76 NNG-NYTLIAKNPLGT---ANQTINGHFLKEPF 104 (118)
T ss_dssp GCE-EEEEEEEETTEE---EEEEEEECCSCCCC
T ss_pred cCE-EEEEEEECCCCe---EeeEEEEEEccCCC
Confidence 995 999999999864 45566776665543
No 119
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.47 E-value=1.6e-13 Score=96.80 Aligned_cols=91 Identities=18% Similarity=0.314 Sum_probs=69.9
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc--c---CCcEEEeec-CCCCC
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT--T---AGALHIRDT-GMEDS 79 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~--~---~G~L~I~~v-~~~D~ 79 (114)
..+.|...|++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ .++++... . +..|.|.++ +.+|+
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~--~v~W~k~~~~~------~~~~~~~~~~~~~~~~~L~i~~v~~~~d~ 76 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRP--KIVWNKKGKKV------SNQRFEVIEFDDGSGSVLRIQPLRTPRDE 76 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCC--EEEEEETTEEC------CCTTEEEEEEGGGTEEEEEECSCCTTTTC
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCC--EEEEEECCcCC------CCCceeEEEEcCCCceEEEEeccCCCCCC
Confidence 34679999999999999999999999765443 89999999864 23344332 1 235999999 49999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
| .|+|.|.|..+. .+..+.|.|..+
T Consensus 77 G-~Y~C~a~n~~g~---~~~~~~l~V~~~ 101 (212)
T 2yd6_A 77 A-IYECVASNNVGE---ISVSTRLTVLRE 101 (212)
T ss_dssp E-EEEEEEEETTEE---EEEEEEEEEECG
T ss_pred e-EEEEEEEcCCCc---EEEEEEEEEecc
Confidence 5 999999998643 455778888764
No 120
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.47 E-value=9.4e-14 Score=104.99 Aligned_cols=87 Identities=22% Similarity=0.311 Sum_probs=72.1
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|...+.+..+.+|.++.|.|.+.+++.+ .++|+||+..+ ..+.|+.+. ++.|.|.+++.+|+| .|+|.|
T Consensus 295 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~g~~~-----~~~~~~~~~-~~~L~i~~v~~~d~G-~Y~C~a 365 (382)
T 1cs6_A 295 PDWLDVITDTEADIGSDLRWSCVASGKPRP--AVRWLRDGQPL-----ASQNRIEVS-GGELRFSKLVLEDSG-MYQCVA 365 (382)
T ss_dssp EEEEECCCCEEEETTCCEEEECEEEEESCC--EEEEEETTEEC-----CCCSSEEEE-TTEEEESSCCGGGCE-EEEEEE
T ss_pred CCcccCCCccEEcCCCeEEEEEEeeeecCC--EEEEEECCEEC-----CCCceEEEE-CCEEEECcCCcccCE-EEEEEE
Confidence 457778888999999999999999776544 89999999854 456788775 789999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEe
Q psy9140 88 THKLTGERKISPPSQVMVS 106 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~ 106 (114)
.|.++. .+..+.|.|.
T Consensus 366 ~N~~G~---~~~~~~l~V~ 381 (382)
T 1cs6_A 366 ENKHGT---VYASAELTVQ 381 (382)
T ss_dssp EETTEE---EEEEEEEEEE
T ss_pred EeCCCe---EEEEEEEEEe
Confidence 999864 4557788875
No 121
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.47 E-value=1.9e-13 Score=99.35 Aligned_cols=95 Identities=16% Similarity=0.262 Sum_probs=72.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee-CCeeeeeeeeccCCcEEEc----cCCcEEEeecCCCCCCee
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR-EGVSEARSIIHSGGRYSIT----TAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k-d~~~~~~~~~~~~~r~~v~----~~G~L~I~~v~~~D~gg~ 82 (114)
..+.+.|++..|.+|+++.|.|.+.+.+++ ..+.|+| |+..+ .....|+.+. .++.|.|.+++.+|+| .
T Consensus 3 ~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~-~~i~W~~~~g~~~----~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G-~ 76 (291)
T 1qz1_A 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKD-KDISWFSPNGEKL----SPNQQRISVVWNDDDSSTLTIYNANIDDAG-I 76 (291)
T ss_dssp CCEEEESSSEEEETTCCEEEEEEESSCCSC-CEEEEECTTSCBC----CSSCSSEEEEEEETTEEEEEECSCCGGGCE-E
T ss_pred cceEecCCCceEeCCCeEEEEEEeCCCCCC-cEeEEECCCCeEC----ccCCceEEEEEcCCCeEEEEEecCCCCCCE-E
Confidence 458899999999999999999999765321 2899999 66643 2345677775 3468999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|+|.|.|..++. .+....|.|..+..
T Consensus 77 Y~C~~~n~~g~~--~~~~~~l~v~~~~~ 102 (291)
T 1qz1_A 77 YKCVVTAEDGTQ--SEATVNVKIFQKLM 102 (291)
T ss_dssp EEEEEECTTSCE--EEEEEEEEEECCSE
T ss_pred EEEEEEcCCCCe--eEEEEEEEeecccc
Confidence 999999987542 44566777765543
No 122
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.46 E-value=2.9e-13 Score=96.10 Aligned_cols=93 Identities=14% Similarity=0.127 Sum_probs=67.5
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEee--CCeeeeeee-----eccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR--EGVSEARSI-----IHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k--d~~~~~~~~-----~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
++...+.+|+++.|.|...+...+...|.|.| ++..|.... ...++|+.++++|+|.|++++.+|+| .|+|.
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG-~Y~c~ 84 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQD-IYKVS 84 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCE-EEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCE-EEEEE
Confidence 45678999999999995422112212899999 887652110 13578999999999999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEecc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|.|..+.. ..+....|.|.++
T Consensus 85 ~~n~~g~~-~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 85 IYDTKGKN-VLEKIFDLKIQER 105 (182)
T ss_dssp EEETTSCE-EEEEEEEEEEECC
T ss_pred EEeCCCce-eEEEEEEEEEcCc
Confidence 99986432 2233567888764
No 123
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.46 E-value=1.8e-13 Score=94.84 Aligned_cols=97 Identities=18% Similarity=0.210 Sum_probs=64.3
Q ss_pred ceeec-cceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeee-----------eccCCcEEEc----------c
Q psy9140 9 DYEIN-TGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSI-----------IHSGGRYSIT----------T 65 (114)
Q Consensus 9 ~~~v~-~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~-----------~~~~~r~~v~----------~ 65 (114)
.++|+ |.+..+..|++|.|.|.+.+.+.+.. .|.|+|++..++... ....+|+... .
T Consensus 2 dv~V~vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (225)
T 4fmk_A 2 DVRVRVLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLR 81 (225)
T ss_dssp CCSEECCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCC
T ss_pred cEEEEeCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccC
Confidence 34443 45678999999999999866555544 689999887543110 1112344332 3
Q ss_pred CCcEEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 66 AGALHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 66 ~G~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+++|.|.+|+.+|+| .|+|.|.|..+.. .+....+.+..+
T Consensus 82 ~~sL~I~~v~~~D~G-~Y~C~~~~~~~~~--~~~~~~~~~~~~ 121 (225)
T 4fmk_A 82 DATLAFRGLRVEDEG-NYTCEFATFPNGT--RRGVTWLRVIAQ 121 (225)
T ss_dssp BCCEEECSCCGGGCE-EEEEEEEEETTEE--EEEEEEEEEEBC
T ss_pred cEEEEEccCCHHHCc-ceEEEEEeCCCcc--eeeeeeeeeecC
Confidence 578999999999995 9999999975542 233444555443
No 124
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.46 E-value=5.1e-14 Score=99.95 Aligned_cols=98 Identities=15% Similarity=0.137 Sum_probs=66.1
Q ss_pred ceeecccee-EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeee---ccC-Cc----EEEccCCcEEEeecCCCCC
Q psy9140 9 DYEINTGNT-FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSII---HSG-GR----YSITTAGALHIRDTGMEDS 79 (114)
Q Consensus 9 ~~~v~~~d~-~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~---~~~-~r----~~v~~~G~L~I~~v~~~D~ 79 (114)
.+.+.|... .+.+|.++.|.|.+.+.+.++..+.|+|++..+..... ..+ .+ +.. .+.|.|.+|+.+|+
T Consensus 106 ~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~I~~v~~~D~ 183 (213)
T 2x1w_L 106 DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKF--LSTLTIDGVTRSDQ 183 (213)
T ss_dssp EEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEE--EEEEEESSCCGGGC
T ss_pred ceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceee--eEEEEECCCCcccC
Confidence 355666665 89999999999999654333227999999886321111 000 00 111 35799999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
| .|+|.|.|..+. .+..+.|.|.+++.|.
T Consensus 184 G-~Y~C~a~N~~g~---~~~~~~l~V~~~p~i~ 212 (213)
T 2x1w_L 184 G-LYTCAASSGLMT---KKNSTFVRVHEDPIEG 212 (213)
T ss_dssp E-EEEEEEECSSCE---EEEEEEEEEEC-----
T ss_pred E-EEEEEEecCCCc---EEEEEEEEEecccccC
Confidence 5 999999998754 4678999999887664
No 125
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.46 E-value=5.2e-14 Score=97.26 Aligned_cols=86 Identities=14% Similarity=0.229 Sum_probs=68.4
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc---CCcEEEee-cCCCCCCeeeEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT---AGALHIRD-TGMEDSYIRYYCQ 86 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~---~G~L~I~~-v~~~D~gg~Y~C~ 86 (114)
...+.+..+.+|.++.|.|.+.+++.+ .++|+|++..+ ..+.||.+.. ++.|.|.+ ++.+|+| .|+|.
T Consensus 108 ~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~~d~G-~Y~C~ 179 (197)
T 2j8h_A 108 LEGMGAVHALRGEVVSIKIPFSGKPDP--VITWQKGQDLI-----DNNGHYQVIVTRSFTSLVFPNGVERKDAG-FYVVC 179 (197)
T ss_dssp BTTBEEEEEETTCCCEEEEEEEEESCC--EEEEEESSCEE-----CSSSSCEEEECSSEEEEECTTCCCGGGCE-EEEEE
T ss_pred ccccCeEEEeCCCEEEEEEEEEecCCC--cEEEEECCEEe-----ecCCCEEEEEcCCceEEEEeCCCCcccCE-eEEEE
Confidence 334567789999999999999765544 89999999853 4667887753 46899999 9999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEec
Q psy9140 87 TTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|.++. .+..+.|.|.|
T Consensus 180 a~N~~g~---~~~~~~l~V~d 197 (197)
T 2j8h_A 180 AKNRFGI---DQKTVELDVAD 197 (197)
T ss_dssp EEETTEE---EEEEEEEEEEC
T ss_pred EEeCCCc---EeEEEEEEEeC
Confidence 9998764 45677888864
No 126
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.46 E-value=6e-13 Score=91.58 Aligned_cols=90 Identities=13% Similarity=0.197 Sum_probs=68.6
Q ss_pred ccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 5 DMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 5 vv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
|..++..+.+....+.+|.++.|.|.+.+...+ ..+.|+|++..+. . ...++.|.|.+++.+|+| .|+
T Consensus 86 V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~~W~k~g~~~~---------~-~~~~~~L~i~~v~~~d~G-~Y~ 153 (175)
T 1fnl_A 86 VHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTAL-HKVTYLQNGKDRK---------Y-FHHNSDFHIPKATLKDSG-SYF 153 (175)
T ss_dssp EECSSEEEECSCSEEETTCCEEEEEEECTTCCC-EEEEEEETTEEEE---------E-EEECCCEEESSCCGGGCE-EEE
T ss_pred EeCCCceeeCCCceecCCCCEEEEEEcCCCCCc-eEEEEEECCeEcc---------C-CCCCCEEEEcccChhhCe-EEE
Confidence 334455666667789999999999999764332 2899999998641 1 123689999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|.|.|..+. ..|....|.|.+|
T Consensus 154 C~a~n~~~~--~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 154 CRGLVGSKN--VSSETVNITITQA 175 (175)
T ss_dssp EEEEETTEE--EECCCEEEEEECC
T ss_pred EEEEcCCCC--ccCccEEEEEeCC
Confidence 999997433 4677999999875
No 127
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.46 E-value=1.9e-13 Score=95.17 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=65.2
Q ss_pred EEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC-CcEEEeecCCCCCCeeeEEEEeeccCCcEEe
Q psy9140 19 VLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA-GALHIRDTGMEDSYIRYYCQTTHKLTGERKI 97 (114)
Q Consensus 19 v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~-G~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~ 97 (114)
+.+|.++.|.|.+.+.+ + .++|+|++..+ ..+.|+.+..+ +.|.|.+++.+|+| .|+|.|.|.++. ..
T Consensus 122 ~~~g~~v~l~C~~~~~p-p--~i~W~~~g~~l-----~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a~N~~g~--~~ 190 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-A--NIQWLFNSQSL-----QLTERMTLSQNNSILRIDPIKREDAG-EYQCEISNPVSV--RR 190 (208)
T ss_dssp CCTTCCEEEEEECSCTT-C--EEEEEETTEEC-----CCCSSEEEETTTTEEEESSCCGGGCE-EEEEEEECTTCC--EE
T ss_pred EeeCCCEEEEEECCCCC-C--ceEEEECCEeC-----CCCCCeEEcCCCCEEEEeccCHHhCe-EEEEEEecCCCc--cc
Confidence 88999999999997632 2 89999999853 45678888754 78999999999995 999999999876 36
Q ss_pred CCCeEEEEeccccc
Q psy9140 98 SPPSQVMVSEIALP 111 (114)
Q Consensus 98 s~~a~L~V~~~~~~ 111 (114)
|.+.+|.|..|...
T Consensus 191 s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 191 SNSIKLDIIFDPHH 204 (208)
T ss_dssp CCCEEECCC-----
T ss_pred CCceeeeEEeCCcc
Confidence 88999999887654
No 128
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.45 E-value=2e-13 Score=88.07 Aligned_cols=93 Identities=17% Similarity=0.214 Sum_probs=66.1
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCc--ceEEEeeCCe-------eeee-e--------eeccCCcEEEccC------C
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNL--LLIAWLREGV-------SEAR-S--------IIHSGGRYSITTA------G 67 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~--~~vsW~kd~~-------~~~~-~--------~~~~~~r~~v~~~------G 67 (114)
..|....+.+|++|.|.|.+.+...+. ..+.|+|++. .++. . .....+|+.+..+ +
T Consensus 10 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 89 (126)
T 1eaj_A 10 TPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDA 89 (126)
T ss_dssp SSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBC
T ss_pred CCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeE
Confidence 456677899999999999985433221 2699999752 2211 0 0122578888765 7
Q ss_pred cEEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 68 ALHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 68 ~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+|.|++|+.+|+| .|.|.+.|..+ ..+...+|.|.+|
T Consensus 90 sL~I~~v~~~D~G-~Y~C~v~~~~~---~~~~~~~L~V~~p 126 (126)
T 1eaj_A 90 SINVTNLQLSDIG-TYQCKVKKAPG---VANKKIHLVVLVK 126 (126)
T ss_dssp CEEECSCCGGGCE-EEEEEEEETTE---EEEEEEEEEEEC-
T ss_pred EEEECcCChHHCe-EEEEEEEcCCc---cCCcEEEEEEEcC
Confidence 8999999999995 99999999643 3455778888765
No 129
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.45 E-value=2.9e-14 Score=98.88 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=66.7
Q ss_pred ceeeccceeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
.+...+.+..+.+|.++.|.|.+ .+++.+ .++|+|++... .....++....+|.|.|.+++.+|+| .|+|.|
T Consensus 123 ~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~--~v~W~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a 195 (214)
T 3jz7_A 123 SGTRCFVDGSEEIGNDFKLKCEPKEGSLPL--QFEWQKLSDSQ----TMPTPWLAEMTSPVISVKNASSEYSG-TYSCTV 195 (214)
T ss_dssp BSCEEEEESCCBTTCCEEEEEECSBCCSSC--EEEEEECSTTC----CCCGGGGGGTTSSEEEECSCCGGGCE-EEEEEE
T ss_pred CCceeeeecceecCCcEEEEecCCCCCCCC--EEEEEECCCCC----ccCccceeccCCCEEEEecCCHHHCE-EEEEEE
Confidence 34444555568899999999999 565443 89999965432 12233444456789999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.++. .+..+.|.|.+|+
T Consensus 196 ~N~~g~---~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 196 QNRVGS---DQCMLRLDVVPPS 214 (214)
T ss_dssp ECSSCE---EEEEEEECCBCCC
T ss_pred EcCCCc---EEEEEEEEEeCCC
Confidence 999864 4667888888763
No 130
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.45 E-value=4.6e-13 Score=94.32 Aligned_cols=91 Identities=21% Similarity=0.238 Sum_probs=67.4
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeeee---------cc----CCcEEEccCCcEEEeecCCC
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSII---------HS----GGRYSITTAGALHIRDTGME 77 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~~---------~~----~~r~~v~~~G~L~I~~v~~~ 77 (114)
-.|+...+.+|.+|.|+|.+.+. ++. .+.|+|++..+..... .. .+|+.+..+|+|.|++|+.+
T Consensus 3 ~~p~~v~~~~G~~v~L~C~~~~~--~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~ 80 (193)
T 2if7_A 3 LTPLMVNGILGESVTLPLEFPAG--EKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKME 80 (193)
T ss_dssp CCCEEEEEETTSCEEECCCCCCC--SCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGG
T ss_pred CCCeEEEEEecCeEEEeccCCCc--ccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcc
Confidence 35788899999999999998542 223 8999999765421000 01 25888888999999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|+| .|+|.+.|..+. ......|.|.++
T Consensus 81 D~G-~Y~C~~~~~~~~---~~~~~~L~V~~~ 107 (193)
T 2if7_A 81 DTG-SYRAQISTKTSA---KLSSYTLRILRQ 107 (193)
T ss_dssp GCE-EEEEEEECSSCE---EEEEEEEEEECC
T ss_pred cCc-eEEEEEEecCCC---eEEEEEEEEEcc
Confidence 995 999999997543 223677888754
No 131
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.45 E-value=5.2e-13 Score=89.60 Aligned_cols=100 Identities=18% Similarity=0.211 Sum_probs=68.3
Q ss_pred ceee--ccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCee--e-eeee---------eccCCcEEEccC------C
Q psy9140 9 DYEI--NTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVS--E-ARSI---------IHSGGRYSITTA------G 67 (114)
Q Consensus 9 ~~~v--~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~--~-~~~~---------~~~~~r~~v~~~------G 67 (114)
.|.+ .++...+.+|++|.|.|.+.+...... .+.|+|++.. + ++.. ..-.+|+.+..+ +
T Consensus 6 ~~~V~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 85 (139)
T 1pko_A 6 QFRVIGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKV 85 (139)
T ss_dssp CCEEECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEE
T ss_pred EEEEECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeE
Confidence 4544 344678999999999999844322112 8999998742 1 1100 011478887643 4
Q ss_pred cEEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 68 ALHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 68 ~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
+|.|++|+.+|+| .|+|.+.|..+ ..+..++|.|.+|...+
T Consensus 86 sL~I~~v~~~D~G-~Y~C~v~~~~~---~~~~~~~L~V~~P~~~~ 126 (139)
T 1pko_A 86 ALRIQNVRFSDEG-GYTCFFRDHSY---QEEAAVELKVEDPFYWI 126 (139)
T ss_dssp EEEESSCCGGGCE-EEEEEEEETTE---EEEEEEEEEEECTTTTS
T ss_pred EEEEccCCHHHCE-EEEEEEEcCCC---ceEEEEEEEEecCcCcc
Confidence 7999999999995 99999999753 34567899999776554
No 132
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.45 E-value=3.1e-13 Score=98.27 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=74.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|...+.+..+.+|.++.|.|.+.+++.+ .+.|+|++..+ ....+.||.+..++.|.|.+++.+|+| .|+|.|
T Consensus 99 ~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~---~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~ 172 (291)
T 2wim_A 99 LTFREVVSPQEFKQGEDAEVVCRVSSSPAP--AVSWLYHNEEV---TTISDNRFAMLANNNLQILNINKSDEG-IYRCEG 172 (291)
T ss_dssp CBCCSCCCSEEEETTSCEEECCCCBCSSCC--EEEEECC-------CBCCCSSEEECTTSCEEETTCCGGGCE-EEEEEE
T ss_pred cceEeCCCChhhcCCCCEEEEEEEccCCCC--EEEEEECCccc---cccCCceEEEccCCCEEEEecchhhCE-EEEEEE
Confidence 346677888899999999999999775444 89999999864 233578999999999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|..++. ..+....|.|..++.+
T Consensus 173 ~n~~~~~-~~~~~~~~~v~~~p~~ 195 (291)
T 2wim_A 173 RVEARGE-IDFRDIIVIVNVPPAI 195 (291)
T ss_dssp EETTTTE-EEEEEEEEEEEBCCCC
T ss_pred EECCCCe-eEEeeEEEEeccCCcc
Confidence 9987553 2333567777776654
No 133
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.44 E-value=3.2e-13 Score=92.88 Aligned_cols=94 Identities=18% Similarity=0.223 Sum_probs=68.2
Q ss_pred ccee-eccceeEEEeCCeEEEEee-cCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEE
Q psy9140 8 SDYE-INTGNTFVLRGNIAVLQCN-IPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 8 ~~~~-v~~~d~~v~~G~~AvL~C~-~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C 85 (114)
++|. ..+++..+.+|+++.|.|. +.+.+.+ ..+.|+|++..+.. .....++....++.|.|.+++.+|+| .|+|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~-~~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C 83 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDD-LSYRWLLNEFPVFI--TMDKRRFVSQTNGNLYIANVEASDKG-NYSC 83 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSC-CEEEEEESSTTCBC--CCSSSEEECTTTCCEEESSCCGGGCE-EEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCc-eEEEEEECCceeee--eeCCCeEEEcCCCeEEECcCCcccCe-EEEE
Confidence 3444 4558889999999999999 6555441 28999999986521 12334555567899999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEE
Q psy9140 86 QTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V 105 (114)
.+.|..+.....+....|.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~ 103 (201)
T 3s97_C 84 FVSSPSITKSVFSKFIPLIP 103 (201)
T ss_dssp EEEEGGGTEEEECCCEEEEE
T ss_pred EEEecCCCcchhhcccceee
Confidence 99998766544445555544
No 134
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.44 E-value=1.1e-12 Score=90.96 Aligned_cols=96 Identities=21% Similarity=0.307 Sum_probs=71.2
Q ss_pred ceeeccceeEEEeCCeEEEEee-cCCCCCCcceEEEeeCCe-eeeeee----eccCCcEEEc-cCCcEEEeecCCCCCCe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCN-IPAYNHNLLLIAWLREGV-SEARSI----IHSGGRYSIT-TAGALHIRDTGMEDSYI 81 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~-~~~~~~~~~~vsW~kd~~-~~~~~~----~~~~~r~~v~-~~G~L~I~~v~~~D~gg 81 (114)
.+...+.+..+.+|.++.|.|. +.+++.+ .++|+|++. .+.... .....+|.+. .++.|.|.+++.+|+|
T Consensus 106 ~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G- 182 (212)
T 1f97_A 106 SKPTISVPSSVTIGNRAVLTCSEHDGSPPS--EYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSG- 182 (212)
T ss_dssp CCCEEECCSEEETTSCEEEEEECSCCBSCC--EEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCE-
T ss_pred CCcccCCccccCCCCeEEEEEEcccCcCCC--EEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCc-
Confidence 3445556678999999999999 5665444 899999998 652110 0112567764 4789999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|+|.|.|..+.. ..|...+|.|++.
T Consensus 183 ~Y~C~a~n~~g~~-~~s~~~~l~V~~~ 208 (212)
T 1f97_A 183 EYYCQAQNGYGTA-MRSEAAHMDAVEL 208 (212)
T ss_dssp EEEEEEECSSSCC-EECCCEEEEEESS
T ss_pred EEEEEEccccCCc-cccceEEEEEEEe
Confidence 9999999998642 4577889999874
No 135
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.44 E-value=1.6e-13 Score=94.06 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=69.7
Q ss_pred cceeec--cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc-CCcEEEeecCCCCCCeeeE
Q psy9140 8 SDYEIN--TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT-AGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~--~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~-~G~L~I~~v~~~D~gg~Y~ 84 (114)
|.+.+. |.+..+.+|.++.|.|.+.+.+.+ .+.|+|++..+ ..+.||.+.. ++.|.|.+++.+|+| .|+
T Consensus 3 P~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~-----~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~ 74 (192)
T 2va4_A 3 PAISMPQKSFNATAERGEEMTFSCRASGSPEP--AISWFRNGKLI-----EENEKYILKGSNTELTVRNIINSDGG-PYV 74 (192)
T ss_dssp CEEECSCCEEEEETTSCCCEEEECEEECSSCC--EEEEEETTEEC-----CCSSSEEEETTTTEEEECSCCGGGCE-EEE
T ss_pred CcccCCCCCcEEEEecCCCEEEEEeeccCCCC--eEEEEECCeEc-----CCCccEEEeCCeeEEEEecCChhcCc-EEE
Confidence 344443 446788899999999999765433 89999999854 4567888765 457999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|.+.|..+. .+....|.|..++.+
T Consensus 75 C~~~~~~~~---~~~~~~l~V~~~p~~ 98 (192)
T 2va4_A 75 CRATNKAGE---DEKQAFLQVFVQPHI 98 (192)
T ss_dssp EEEEETTEE---EEEEEEEEEEEEEEE
T ss_pred EEEEccccc---cceEEEEEEEccCcc
Confidence 999997543 334667777665543
No 136
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.44 E-value=1.6e-13 Score=103.74 Aligned_cols=94 Identities=19% Similarity=0.286 Sum_probs=74.9
Q ss_pred ccceeeccceeEE---EeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCC-CCCCee
Q psy9140 7 SSDYEINTGNTFV---LRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGM-EDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d~~v---~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~-~D~gg~ 82 (114)
.|.|..+|++..+ .+|+++.|.|.+.+.+.+ .+.|+||+..+ ....+.||.+. +|.|.|.++.. +|+| .
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~--~v~W~k~g~~~---~~~~~~~~~~~-~~~L~i~~~~~~~D~G-~ 76 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPA--TYRWKMNGTEL---KMGPDSRYRLV-AGDLVISNPVKAKDAG-S 76 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCC--EEEEEETTEEC---CCSTTSSEEEE-TTEEEEESCCHHHHCE-E
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCC--EEEEEECCEEC---CcCCCccEEee-CCeEEEecccccccCE-E
Confidence 4679999999887 799999999999765433 89999999865 22346788775 79999999997 9995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|+|.|.|..+. ..+..+.|.|..+.
T Consensus 77 Y~C~a~n~~g~--~~s~~~~l~v~~~~ 101 (382)
T 1cs6_A 77 YQCVATNARGT--VVSREASLRFGFLQ 101 (382)
T ss_dssp EEEEEEETTEE--EECCCEEEEEEEEC
T ss_pred EEEEEEcCCcE--EEecceEEEeeccc
Confidence 99999997643 35667888887544
No 137
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.44 E-value=1.2e-12 Score=91.76 Aligned_cols=93 Identities=18% Similarity=0.262 Sum_probs=66.8
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeeee-------eccCCcEEEcc---CCcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSI-------IHSGGRYSITT---AGALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~-------~~~~~r~~v~~---~G~L~I~~v~~~ 77 (114)
+...| +..+.+|++|.|.|.+.+.+.+ .+.|+|. +....... ....+||.+.. ++.|.|.+|+.+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDV--YVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTS--CEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCc--eEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 34455 8899999999999999754333 8999993 22211000 01356888543 457999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+| .|+|.|.|..++....+..+.|.|.
T Consensus 81 D~G-~Y~C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 81 DEA-DYYCQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp GCE-EEEEEEEETTTTEEEEBCCEEEEEE
T ss_pred hCE-EEEEEeccCCcceeEEcCceEEEEe
Confidence 995 9999999987643456778899998
No 138
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.44 E-value=1.4e-13 Score=94.70 Aligned_cols=91 Identities=19% Similarity=0.333 Sum_probs=68.6
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc-cCC--cEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT-TAG--ALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-~~G--~L~I~~v~~~D~gg~Y 83 (114)
.+.|...|++..+.+|.++.|.|.+.+.+.+ .+.|+|++..+. .....++.+. .+| .|.|.+++.+|+| .|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~---~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y 78 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVP--EVSWFRDGQVIS---TSTLPGVQISFSDGRAKLTIPAVTKANSG-RY 78 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCC--EEEEEESSSBCC---TTTSTTCEEEEETTEEEEEESSCCGGGCE-EE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCC--EEEEEECCEEcc---cccCCceEEEeCCCEEEEEECCCCcccCE-EE
Confidence 4668899999999999999999999665443 899999998641 1122344443 233 7999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEe
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+|.|.|..+. .+..+.|.|.
T Consensus 79 ~C~~~n~~~~---~~~~~~l~v~ 98 (194)
T 2a38_A 79 SLKATNGSGQ---ATSTAELLVK 98 (194)
T ss_dssp EEEEEETTEE---EEEEEEEEEE
T ss_pred EEEEEcCCce---EeEEEEEEEc
Confidence 9999997643 3445677776
No 139
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.44 E-value=1.7e-13 Score=103.64 Aligned_cols=85 Identities=22% Similarity=0.352 Sum_probs=69.1
Q ss_pred cceeeccce-eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 8 SDYEINTGN-TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 8 ~~~~v~~~d-~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
+.|...|.+ ..+.+|.++.|.|.+.+++.+ .++|+||+..+ .++||.+. ++.|.|.+++.+|+| .|+|.
T Consensus 309 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~g~~~------~~~~~~~~-~~~L~i~~~~~~d~G-~Y~C~ 378 (395)
T 1bih_A 309 PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAP--NVVWSHNAKPL------SGGRATVT-DSGLVIKGVKNGDKG-YYGCR 378 (395)
T ss_dssp EEEEECCCSEEEECTTSCEEEECEEEEESCC--CCEEEETTEEC------CSSSEEEE-TTEEEESSCCSTTCE-EEEEE
T ss_pred CccccCCCcceEecCCCeEEEEEEECcccCC--eeEEEECCEEC------CCCceEEE-CCEEEEeeCCcccCE-EEEEE
Confidence 457777877 789999999999999776554 79999999853 34588876 679999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEE
Q psy9140 87 TTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V 105 (114)
|.|.++. .+..+.|.|
T Consensus 379 a~N~~G~---~~~~~~l~V 394 (395)
T 1bih_A 379 ATNEHGD---KYFETLVQV 394 (395)
T ss_dssp EEETTEE---EEEEEEEEE
T ss_pred EEccCCC---ceEEEEEEE
Confidence 9999864 455667766
No 140
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.43 E-value=4e-14 Score=103.56 Aligned_cols=98 Identities=14% Similarity=0.273 Sum_probs=68.8
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeee---eeee--eccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSE---ARSI--IHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~---~~~~--~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
.+.+...|.+..+.+|.++.|.|.+.+++.+. .++|+|++..+ +... ....+++....++.|.|.+++.+|+|
T Consensus 188 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G- 265 (290)
T 2o26_X 188 IPVVSVPETSHLLKKGDTFTVVCTIKDVSTSV-NSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSG- 265 (290)
T ss_dssp CCEEECSCSBCCCCTTCCEEEEEEEEESSTTC-EEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCE-
T ss_pred CCccccCCCcceEecCCcEEEEEEEecCCcce-eEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCe-
Confidence 34577788888999999999999997654431 49999998862 1000 00112333445689999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|+|.|.|.++. .+..+.|.|.+++
T Consensus 266 ~Y~C~a~N~~g~---~~~~~~l~V~~~P 290 (290)
T 2o26_X 266 VFMCYANNTFGS---ANVTTTLKVVEKG 290 (290)
T ss_dssp EEEEEEECSSCE---EEEEEEECC----
T ss_pred EEEEEEeCCCCc---EEEEEEEEEEeCC
Confidence 999999999864 4667888887653
No 141
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.43 E-value=5.8e-13 Score=98.17 Aligned_cols=92 Identities=22% Similarity=0.356 Sum_probs=73.1
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|.+..+.+|.++.|.|.+.+.+.+ .++|+|++..+. ......|+....+|.|.|.+++.+|+| .|+|.|
T Consensus 109 p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~--~v~W~k~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a 183 (304)
T 2yd9_A 109 PNIDMGPQLKVVERTRTATMLCAASGNPDP--EITWFKDFLPVD--PSASNGRIKQLRSGALQIESSEETDQG-KYECVA 183 (304)
T ss_dssp CEEEECCCCEEEETTSCEEECCEEECSSCC--EEEEEETTEECC--GGGGTTSEEECTTSCEEECSCCGGGCE-EEEEEE
T ss_pred CeeecCCccEEEeCCCeEEEEEECccCCCC--eEEEEECCEECc--CCCCcceEEeCCCeEEEEccCCcccCE-EEEEEE
Confidence 457788888899999999999999776444 899999998652 122345888888999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEe
Q psy9140 88 THKLTGERKISPPSQVMVS 106 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~ 106 (114)
.|..+. ..+..+.|.|.
T Consensus 184 ~n~~g~--~~~~~~~l~v~ 200 (304)
T 2yd9_A 184 TNSAGV--RYSSPANLYVR 200 (304)
T ss_dssp EETTEE--EECCCEEEEEE
T ss_pred EeCCCC--EEeccEEEEEE
Confidence 998653 24445788775
No 142
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.43 E-value=5.4e-13 Score=92.67 Aligned_cols=98 Identities=16% Similarity=0.255 Sum_probs=71.4
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEe-----ecCCCCCC
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIR-----DTGMEDSY 80 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~-----~v~~~D~g 80 (114)
..+.|...|++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+.........+.....+|.|.+. +++.+|+|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 85 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTP--TIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCC--EEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCC--EEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCe
Confidence 45678899999999999999999999665433 899999998652111111234556667876654 56999995
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|+|.|.|..+. ..+..+.|.|..+
T Consensus 86 -~Y~C~~~n~~g~--~~~~~~~l~V~~~ 110 (212)
T 2v9r_A 86 -VYVCVARNYLGE--AVSHDASLEVAIL 110 (212)
T ss_dssp -EEEEEEEETTEE--EECCCEEEEECEE
T ss_pred -EEEEEEECCCCc--eeecceEEEEEec
Confidence 999999997643 2466788888753
No 143
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.43 E-value=1.5e-12 Score=92.89 Aligned_cols=95 Identities=19% Similarity=0.277 Sum_probs=70.7
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeee----eeccCCcEEEcc-----CCcEEEeec
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARS----IIHSGGRYSITT-----AGALHIRDT 74 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~----~~~~~~r~~v~~-----~G~L~I~~v 74 (114)
.+...|.+..+.+|++|.|.|.+.+.+.+ .+.|+|++. .++.. ....++||.+.. ++.|.|.++
T Consensus 129 ~v~~~p~~~~v~~G~~v~L~C~~~~~p~~--~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 206 (238)
T 2p1y_A 129 QVRQSPQSLTVWEGETAILNCSYENSAFD--YFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADS 206 (238)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCCTTCC--EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTC
T ss_pred eEEccCceEEEeCCCeEEEEEEEecCCCC--cEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCC
Confidence 45666888899999999999999776444 899999742 11110 012367898852 358999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+.+|+| .|+|.|.|...+.......++|.|.
T Consensus 207 ~~~D~G-~Y~C~a~n~~~~~~~~g~gt~l~V~ 237 (238)
T 2p1y_A 207 QPGDSA-TYFCAAIDTNAYKVIFGKGTHLHVL 237 (238)
T ss_dssp CGGGCE-EEEEEEEETTTTEEEECCCEEEEEE
T ss_pred CHHHCE-EEEEEEeeCCCCeEEECCCEEEEEe
Confidence 999995 9999999975455556778888885
No 144
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=97.18 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=71.9
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCC-CCCcceEEEeeCCeeeeeeee----ccCCcEEEc--------cCCcEEEeecC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAY-NHNLLLIAWLREGVSEARSII----HSGGRYSIT--------TAGALHIRDTG 75 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~-~~~~~~vsW~kd~~~~~~~~~----~~~~r~~v~--------~~G~L~I~~v~ 75 (114)
.|...|++..+.+|+++.|.|.+.+. +.+ .+.|+|++..+..... ....|+.+. .++.|.|.+++
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~--~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPVG--PIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCC--CEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCCc--eEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 46677899999999999999999765 333 7999999864210011 123488763 35689999999
Q ss_pred CCCCCeeeEEEEeeccCCc--EEeCCCeEEEEecccc
Q psy9140 76 MEDSYIRYYCQTTHKLTGE--RKISPPSQVMVSEIAL 110 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~--~~~s~~a~L~V~~~~~ 110 (114)
.+|+| .|+|.|.|..+.. ...+..+.|.|..++.
T Consensus 83 ~~D~G-~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~ 118 (327)
T 2wng_A 83 PADAG-TYYCVKFRKGSPDTEFKSGAGTELSVRAKPS 118 (327)
T ss_dssp GGGCE-EEEEEEEESSTTCEEEEECCCEEEEEEBCCC
T ss_pred cccCe-EEEEEeecCCCcceeEeecCcEEEEEEecCC
Confidence 99995 9999999975432 2345678999986543
No 145
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.42 E-value=2.7e-13 Score=102.52 Aligned_cols=91 Identities=15% Similarity=0.239 Sum_probs=70.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|...|.+..+.+|.++.|.|.+.+++.+ .++|+|++..+.. .....++.. .++.|.|.+++.+|+| .|+|.|
T Consensus 313 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p--~v~W~~~g~~~~~--~~~~~~~~~-~~~~L~i~~v~~~d~G-~Y~C~a 386 (404)
T 3p3y_A 313 PYWLDEPKNLILAPGEDGRLVCRANGNPKP--TVQWMVNGEPLQS--APPNPNREV-AGDTIIFRDTQISSRA-VYQCNT 386 (404)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEEESCC--EEEEEETTEEGGG--SCCCTTEEE-ETTEEEESSCCSSCCC-EEEEEE
T ss_pred CeeeccCCcceeecCCcEEEEEEccccCCC--ceEEEECCEecCC--CCCCceEEe-cCCEEEEeecCHHHCE-EEEEEE
Confidence 457778888999999999999999776544 8999999986521 111234444 4789999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEec
Q psy9140 88 THKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|.++. .+..+.|.|.+
T Consensus 387 ~N~~G~---~~~~~~l~V~d 403 (404)
T 3p3y_A 387 SNEHGY---LLANAFVSVLD 403 (404)
T ss_dssp EETTEE---EEEEEEEEEC-
T ss_pred EeCCCc---EEEEEEEEEEe
Confidence 999864 45577887764
No 146
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.42 E-value=7.6e-13 Score=92.55 Aligned_cols=83 Identities=14% Similarity=0.135 Sum_probs=57.1
Q ss_pred eeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc----CCcEEEeecCCCCCCeeeEEEEeecc
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT----AGALHIRDTGMEDSYIRYYCQTTHKL 91 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~----~G~L~I~~v~~~D~gg~Y~C~a~n~l 91 (114)
+..+.+|.++.|.|.+.+. .+ .++|+|++..+. ..+.++.+.. ++.|.|.+|+.+|+| .|+|.|.|..
T Consensus 109 ~~~v~~G~~v~L~C~~~~~-~~--~v~W~k~g~~~~----~~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~a~n~~ 180 (198)
T 1ugn_A 109 SPVVNSGGNVTLQCDSQVA-FD--GFILCKEGEDEH----PQCLNSQPHARGSSRAIFSVGPVSPSRRW-WYRCYAYDSN 180 (198)
T ss_dssp CSEEETTCCEEEEEECSSC-CS--EEEEEEC----------CEEEC------CCEEEEEECCCCTTSCE-EEEEEEECTT
T ss_pred ccccCCCCcEEEEEecCCC-Cc--EEEEEECCCccC----CccccccccCCCcceeEEEecccCcccCe-EEEEEEEeCC
Confidence 4789999999999999775 33 899999998642 1223333333 378999999999995 9999999986
Q ss_pred CCcE--EeCCCeEEEEe
Q psy9140 92 TGER--KISPPSQVMVS 106 (114)
Q Consensus 92 ~~~~--~~s~~a~L~V~ 106 (114)
.... ..|....|.|+
T Consensus 181 ~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 181 SPYEWSLPSDLLELLVL 197 (198)
T ss_dssp STTEECCCCCCEEEEEE
T ss_pred CCccccCcCceEEEEec
Confidence 5321 23668888875
No 147
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.42 E-value=1.4e-12 Score=84.55 Aligned_cols=92 Identities=13% Similarity=0.175 Sum_probs=65.7
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeeee----eccCCcEEEccC---CcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARSI----IHSGGRYSITTA---GALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~~----~~~~~r~~v~~~---G~L~I~~v~~~ 77 (114)
....|.+..+.+|.+|.|.|.+.+...+ .+.|+|... .++... ....+||.+..+ ..|.|++++.+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDS--FVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAE 81 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCS--CEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTT
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCc--EEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 4556888899999999999998654322 789998641 121110 012579988643 37999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+| .|.|.+.|. ....-...++|.|+
T Consensus 82 DsG-~Y~C~~~~~--~~~~fg~gT~l~V~ 107 (108)
T 1qfw_M 82 DFA-DYHCGQTYN--HPYTFGGGTKLEIK 107 (108)
T ss_dssp CCS-EEEEEECSS--SSCEECCCEEEECC
T ss_pred hCE-EEEEEEccC--CceEECCCEEEEEc
Confidence 996 999999985 23345668888874
No 148
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.42 E-value=3.1e-13 Score=94.42 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=65.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEE--ccCCcEEEeecCCCCCCeeeEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSI--TTAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v--~~~G~L~I~~v~~~D~gg~Y~C 85 (114)
+.+...|.. .|.+|++++|.|.+.+ ..+ .+.|.|++..+. .+.+... ..++.|.|.+++.+|+| .|+|
T Consensus 6 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~--~~~w~k~g~~~~-----~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C 75 (196)
T 3p2t_A 6 PTLWAEPGS-VISWGNSVTIWCQGTL-EAR--EYRLDKEESPAP-----WDRQNPLEPKNKARFSIPSMTEDYAG-RYRC 75 (196)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCC--EEEEEETTSCSC-----SEEECCCSSSSEEEEEESSCCGGGCE-EEEE
T ss_pred CEEEccCCC-cCCCCCcEEEEeeCCC-CCC--EEEEEECCCCCc-----ccccccccCCceEEEEeccCCcccCc-eEEE
Confidence 457788877 8999999999999976 222 789999998541 1111111 34578999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEec
Q psy9140 86 QTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|.|..+ ....|....|.|..
T Consensus 76 ~a~n~~g-~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 76 YYRSPVG-WSQPSDPLELVMTG 96 (196)
T ss_dssp EEEETTE-EBCCCCCEEEEEEC
T ss_pred EEeCCCc-ccCCCccEEEEecC
Confidence 9999864 12356688888864
No 149
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.42 E-value=2.2e-13 Score=100.97 Aligned_cols=89 Identities=18% Similarity=0.178 Sum_probs=66.4
Q ss_pred cceeecccee-EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 8 SDYEINTGNT-FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 8 ~~~~v~~~d~-~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
|.+.+.+.+. .+.+|..+.|.|.+.++++|. .++|+|++..+ .. . ....++.|.|.+++.+|+| .|+|.
T Consensus 217 P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~-~v~W~~~~~~l-----~~--~-~~~~~~~L~i~~v~~~d~G-~Y~C~ 286 (313)
T 4fqp_A 217 PEVSISGYDNNWYLGQNEATLTCDARSNPEPT-GYNWSTTMGPL-----PP--F-AVAQGAQLLIRPVDKPINT-TLICN 286 (313)
T ss_dssp EEEEEECCCSCEETTCCCEEEEEEEEEESCCC-EEEEEETTBSC-----CT--T-EEEETTEEEECCCSSCCEE-EEEEE
T ss_pred CccccccccceeecCCCeEEEEEEecCCCCCc-EEEEEECCEEC-----CC--c-eEEeCCEEEECcCChhhCE-EEEEE
Confidence 3455555444 466788999999997765442 68999999854 11 1 2334689999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEeccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|.|.++. .+..+.|.|++++
T Consensus 287 a~N~~G~---~~~~~~l~V~~~P 306 (313)
T 4fqp_A 287 VTNALGA---RQAELTVQVKEGP 306 (313)
T ss_dssp EECSSCE---EEEEEEEEEECCC
T ss_pred EEeCCCc---EEEEEEEEEEeCC
Confidence 9999864 4667899998664
No 150
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.41 E-value=7.9e-13 Score=95.98 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=70.6
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeee-------eccCCcEEEccCC---cEEEeec
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSI-------IHSGGRYSITTAG---ALHIRDT 74 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~-------~~~~~r~~v~~~G---~L~I~~v 74 (114)
.+.+...|.+..+.+|.++.|.|.+.+.+.+ .+.|+|++ ..+.... ....+||.+..++ .|.|.++
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 215 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRASQDIGS--NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSL 215 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTT--CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSC
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEEecCCCc--EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCC
Confidence 4456777888999999999999999775443 79999952 2211000 0124788886544 4999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
+.+|+| .|+|.|.|. .....+..++|.|++++.
T Consensus 216 ~~~D~G-~Y~C~~~~~--~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 216 ESEDFV-DYYCLQYAS--SPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp CGGGCS-EEEEEECSS--SSCEECCCEEEEEC----
T ss_pred ChhHCE-EEEEEEeeC--CCcEECCCEEEEEECCCc
Confidence 999996 999999995 344567799999998765
No 151
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.41 E-value=2.2e-13 Score=94.20 Aligned_cols=89 Identities=18% Similarity=0.266 Sum_probs=66.4
Q ss_pred eccceeEEEe-CCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeec
Q psy9140 12 INTGNTFVLR-GNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHK 90 (114)
Q Consensus 12 v~~~d~~v~~-G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~ 90 (114)
..+.+..+.+ |+++.|.|.+.+.+.+...+.|+|++..+ ..+.++ . .++.|.|.+++.+|+| .|+|.|.|.
T Consensus 7 ~~~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~-----~~~~~~-~-~~~~L~i~~~~~~d~G-~Y~C~~~n~ 78 (190)
T 2wv3_A 7 VTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVEL-----TATRKN-A-SNMEYRINKPRAEDSG-EYHCVYHFV 78 (190)
T ss_dssp EECCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEEC-----TTCCBC-C-SEEEEEESSCCGGGCE-EEEEEEEET
T ss_pred cccceEEEccCCceEEEEEEeccCCCCceEEEEEECCEEC-----cccceE-e-ccEEEEEecCCcccCE-EEEEEEEeC
Confidence 3456667777 99999999997654422289999999854 233333 2 5789999999999995 999999997
Q ss_pred cCCcEEeCCCeEEEEecccccc
Q psy9140 91 LTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 91 l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
+. .+..+.|.|..++.+.
T Consensus 79 -~~---~~~~~~l~V~~~p~~~ 96 (190)
T 2wv3_A 79 -SA---PKANATIEVKAAPDIT 96 (190)
T ss_dssp -TE---EEEEEEEEEECCCEEE
T ss_pred -Cc---ccccEEEEEecCCccc
Confidence 32 4567888888776553
No 152
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.41 E-value=8.7e-13 Score=85.70 Aligned_cols=92 Identities=14% Similarity=0.192 Sum_probs=65.7
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee----eccCCcEEEcc---CCcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI----IHSGGRYSITT---AGALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~----~~~~~r~~v~~---~G~L~I~~v~~~ 77 (114)
+...|++..+.+|.+|.|.|.+.+.+.+ .+.|+|++ . .++... ....+||.+.. +..|.|++++.+
T Consensus 6 v~q~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (109)
T 2q20_A 6 MTQSPSSLSASVGDRVTITCQASQDISN--YLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPE 83 (109)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTT--CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEeeCCEEEecCCCcEEEEEeeccCCCC--cEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChh
Confidence 4556888999999999999998654322 78999964 2 121100 01257998863 347999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+| .|.|.+.|. +...-...++|.|+
T Consensus 84 DsG-~Y~C~~~~~--~~~~fg~gT~L~V~ 109 (109)
T 2q20_A 84 DIA-TYYCQQYDN--LPYTFGQGTKLEIK 109 (109)
T ss_dssp GCE-EEEEEECSS--SSCCBCCCEEEEEC
T ss_pred hCE-EEEEEEeeC--CcceECCCEEEEEC
Confidence 995 999999985 22234568888874
No 153
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.41 E-value=4.7e-13 Score=91.66 Aligned_cols=96 Identities=20% Similarity=0.293 Sum_probs=68.2
Q ss_pred ccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeeeeccCCcEEEcc---CCcEEEeecCCCCC
Q psy9140 5 DMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSIIHSGGRYSITT---AGALHIRDTGMEDS 79 (114)
Q Consensus 5 vv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~~~~~~r~~v~~---~G~L~I~~v~~~D~ 79 (114)
|..++....+.+..+.+|.++.|.|.+.+++.+ .+.|.|++ ..+.......++||.+.. ++.|.|.+++.+|+
T Consensus 92 V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 169 (192)
T 2va4_A 92 VFVQPHIIQLKNETTYENGQVTLVCDAEGEPIP--EITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDS 169 (192)
T ss_dssp EEEEEEEEEECCEEECTTSEEEEEEEEEEESCC--EEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGC
T ss_pred EEccCcccccCcceEEeCCeEEEEEEecCCCCC--cEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccC
Confidence 333444455567788899999999999765444 89999984 322111123367887764 36799999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
| .|+|.|.|..+. .+..+.|.|+
T Consensus 170 G-~Y~C~a~n~~g~---~~~~~~l~V~ 192 (192)
T 2va4_A 170 G-RYDCEAASRIGG---HQKSMYLDIE 192 (192)
T ss_dssp E-EEEEEEECSSCE---EEEEEEEEEC
T ss_pred E-EEEEEEEecCCc---eEEEEEEEeC
Confidence 5 999999999764 4556677664
No 154
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.41 E-value=2.7e-13 Score=99.27 Aligned_cols=83 Identities=11% Similarity=0.091 Sum_probs=61.8
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC-CcEEEeecCCCCCCeeeEEEEeeccC
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA-GALHIRDTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~-G~L~I~~v~~~D~gg~Y~C~a~n~l~ 92 (114)
+.+..+.+|.++.|.|.+.+.+.+. .++|+||+..+ ..+.||.+..+ +.|.|.+++.+|+| .|+|.|.|.++
T Consensus 228 ~~~~~v~~G~~~~l~C~~~~~p~~~-~v~W~~~g~~~-----~~~~~~~~~~~~~~L~I~~v~~~d~G-~Y~C~a~N~~G 300 (312)
T 2y23_A 228 YLSWEVTGECNVLLKCKVANIKKET-HIVWYKDEREI-----SVDEKHDFKDGICTLLITEFSKKDAG-IYEVILKDDRG 300 (312)
T ss_dssp EEEEEEETTTEEEEEEEEESCCSSC-EEEEEETTEEE-----EEECCC----CEEEEEECSCSGGGCE-EEEEEEESTTC
T ss_pred cceEEEeCCCEEEEEEEEcCCCCCC-EEEEeeCCEEC-----CCCCcEEEECCEEEEEECcCCHHHCE-EEEEEEEcCCC
Confidence 3357899999999999997754332 79999999864 34677777643 58999999999995 99999999987
Q ss_pred CcEEeCCCeEEEEe
Q psy9140 93 GERKISPPSQVMVS 106 (114)
Q Consensus 93 ~~~~~s~~a~L~V~ 106 (114)
. .+..+.|.|+
T Consensus 301 ~---~~~~~~l~i~ 311 (312)
T 2y23_A 301 K---DKSRLKLVDE 311 (312)
T ss_dssp C---EEEEEEECSC
T ss_pred c---eeeeeEEEec
Confidence 5 3445666553
No 155
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.41 E-value=2.9e-13 Score=93.68 Aligned_cols=98 Identities=11% Similarity=0.147 Sum_probs=73.9
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
.+...|++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+... .....+|+.+.. +.|.|.+++.+|+|
T Consensus 6 ~i~~~~~~~~v~~G~~v~L~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~L~i~~~~~~d~G- 81 (209)
T 1nbq_A 6 TVHSSEPEVRIPENNPVKLSCAYSGFSSP--RVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-TGITFKSVTREDTG- 81 (209)
T ss_dssp EEECSCSBCCEETTCCCEEECEEESCSSE--EEEEEEEETTEEEESEETTEECTTTTTTCEEET-TEEECSCCCTTSCS-
T ss_pred EEEcCCCceEEEcCCCEEEEEEEeCCCCc--EEEEEEcCCceeEEEEecCccCccccCceEeec-cEEEEeeCCHHHCc-
Confidence 46678888899999999999999765332 89999988753210 123357887774 99999999999996
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|+|.|.|..+ ....+....|.|..++.+
T Consensus 82 ~Y~C~~~~~~g-~~~~~~~~~l~V~~~p~~ 110 (209)
T 1nbq_A 82 TYTCMVSEEGG-NSYGEVKVKLIVLVPPSK 110 (209)
T ss_dssp EEEEEEEETTS-SCEECCEEECCEEBCCCC
T ss_pred EEEEEEecCCC-CccceEEEEEEEecCCcC
Confidence 99999999754 223455778888766654
No 156
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.41 E-value=8.3e-13 Score=91.39 Aligned_cols=85 Identities=13% Similarity=0.209 Sum_probs=66.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|.+..+.+|..+.|.|.+.+++.+. .++|+|++..+ ....++ ..++.|.|.+++ |+ |.|+|.|
T Consensus 107 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-~v~W~~~~~~~-----~~~~~~--~~~~~L~i~~~~--d~-G~Y~C~a 175 (195)
T 2c5d_C 107 PYFLEEPEDRTVAANTPFNLSCQAQGPPEPV-DLLWLQDAVPL-----ATAPGH--GPQRSLHVPGLN--KT-SSFSCEA 175 (195)
T ss_dssp CEEEECCCCEEECTTCCEEEEEEEECSSCCC-EEEEEESSCBS-----SSSTTS--SCCEEEEECCCS--SC-EEEEEEE
T ss_pred CeEEcCCCcEEEcCCCEEEEEeECCCCCCCC-EEEEEECCEec-----cCCCCc--CCCCeEEEcccc--cC-ceEEEEE
Confidence 4577888899999999999999997764331 79999999854 223333 567899999998 78 5999999
Q ss_pred eeccCCcEEeCCCeEEEE
Q psy9140 88 THKLTGERKISPPSQVMV 105 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V 105 (114)
.|.++. ..|..+.|.|
T Consensus 176 ~N~~g~--~~s~~~~l~V 191 (195)
T 2c5d_C 176 HNAKGV--TTSRTATITV 191 (195)
T ss_dssp EETTEE--EECCCEEEEE
T ss_pred EcCCCc--eEEEEEEEEE
Confidence 998764 2467889999
No 157
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.41 E-value=1.4e-13 Score=110.77 Aligned_cols=94 Identities=17% Similarity=0.297 Sum_probs=75.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc--c-CCcEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT--T-AGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~--~-~G~L~I~~v~~~D~gg~Y~ 84 (114)
+.|...|.+..+.+|.++.|.|.+.+.+.+ .++|+||+..+ ..+++|.+. . .+.|.|.+++.+|+| .|+
T Consensus 198 p~~~~~p~~~~v~~G~~~~l~C~~~g~p~p--~i~W~k~g~~i-----~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~ 269 (570)
T 3b43_A 198 PFFDLKPVSVDLALGESGTFKCHVTGTAPI--KITWAKDNREI-----RPGGNYKMTLVENTATLTVLKVTKGDAG-QYT 269 (570)
T ss_dssp CEEEECCCCBCCBSBSCEEEEEEEESSSCC--EEEEEETTEEC-----CTTSSEEEEEETTEEEEEESSBCGGGCE-EEE
T ss_pred CccccCCceeEecCCCeEEEEEEEEECCCC--EEEEEECCEEC-----cCCCcEEEEEECCEEEEEEcccCcccCE-EEE
Confidence 457788999999999999999999775443 89999999854 445666553 2 368999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
|.|.|..+. .+..+.|.|.+++.++
T Consensus 270 C~a~N~~g~---~~~~~~l~V~~~p~~~ 294 (570)
T 3b43_A 270 CYASNVAGK---DSCSAQLGVQEPPRFI 294 (570)
T ss_dssp EEEEETTEE---EEEEEEECCBCCCEEE
T ss_pred EEEECCCCc---EEEEEEEEeecCCccc
Confidence 999998653 4667889888877653
No 158
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.41 E-value=9.4e-13 Score=91.14 Aligned_cols=97 Identities=15% Similarity=0.160 Sum_probs=68.5
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCC--cceEEEeeCC----------------eeeeeeeeccCCcEEEcc------C
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHN--LLLIAWLREG----------------VSEARSIIHSGGRYSITT------A 66 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~--~~~vsW~kd~----------------~~~~~~~~~~~~r~~v~~------~ 66 (114)
...++...+.+|++|.|.|.+.+.... .+.+.|+|++ ..+........+|+.+.. +
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 83 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGD 83 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTB
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCc
Confidence 345677789999999999999665422 1289999943 211000012267888864 6
Q ss_pred CcEEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 67 GALHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 67 G~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+.|.|.+++.+|+| .|+|.|.|..+. .+..+.|.|..++.+
T Consensus 84 ~~L~i~~v~~~D~G-~Y~C~~~~~~~~---~~~~~~l~V~~~p~~ 124 (214)
T 3jz7_A 84 ASINVTNLQLSDIG-TYQCKVKKAPGV---ANKKFLLTVLVKPSG 124 (214)
T ss_dssp CCEEECSCCGGGCE-EEEEEEEETTEE---EEEEEEEEEECCCBS
T ss_pred ccEEEccCChhhCe-EEEEEEEeCCCc---cccEEEEEEEcCCCC
Confidence 78999999999995 999999997542 456788999877654
No 159
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.41 E-value=5.5e-13 Score=96.94 Aligned_cols=94 Identities=19% Similarity=0.231 Sum_probs=74.2
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee-CCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR-EGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIR 82 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k-d~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~ 82 (114)
.+.|.+.|++..+.+|+++.|.|.+.+.+ . .+.|+| ++.. +..+.|+.+..+| .|.|.+++.+|+| .
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~~~~p--~-~v~W~~~~g~~-----~~~~~~~~~~~~~~~~~L~i~~~~~~D~G-~ 74 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTAIGEP--E-SIDWYNPQGEK-----IISTQRVVVQKEGVRSRLTIYNANIEDAG-I 74 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEEESCC--S-EEECBCTTCCB-----CCCBTTEEEEEETTEEEEEECSCCGGGCE-E
T ss_pred CceEEEeccceEecCCCcEEEEEEEeCCC--C-ceEEECCCCcC-----ccCCCcEEEecCCCEEEEEEccCCcccCE-E
Confidence 46789999999999999999999997642 2 799999 5553 3456789887766 8999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|+|.|.|..+.. .+....|.|..+..+
T Consensus 75 Y~C~~~n~~g~~--~~~~~~l~v~~~~~~ 101 (291)
T 2wim_A 75 YRCQATDAKGQT--QEATVVLEIYQKLTF 101 (291)
T ss_dssp EEEEEECSSSCE--EEEEEEEEEECCCBC
T ss_pred EEEEEecccCce--EEEEEEEEecCCcce
Confidence 999999986542 344667777766544
No 160
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.41 E-value=3.2e-13 Score=86.30 Aligned_cols=62 Identities=23% Similarity=0.348 Sum_probs=51.5
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeec-CCCCCCeeeEEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDT-GMEDSYIRYYCQTTH 89 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v-~~~D~gg~Y~C~a~n 89 (114)
.+|+...+++|.+++|.|.+.+.+ .|+|+||+..+ ..+ .++.|.|.+| +.+|+| .|+|.|.+
T Consensus 4 ~~p~~~v~~~G~~v~L~C~~~g~P----~i~W~kdg~~l-----~~~------~~~~L~I~~v~~~~DsG-~Y~C~A~t 66 (82)
T 3r08_E 4 ENIEYKVSISGTSVELTCPLDSDE----NLKWEKNGQEL-----PQK------HDKHLVLQDFSEVEDSG-YYVCYTPA 66 (82)
T ss_dssp CCCCCEEEEETTEEEEECSSCCCS----SCEEEETTEEC-----TTC------CSSCCBCCSCCTTTTCS-CEEEECSS
T ss_pred CCCceeEEEcCCeEEEEEECCCCC----cEEEEECCEEC-----cCC------CCCEEEECccCccCcCE-EEEEEEcc
Confidence 468889999999999999997753 38999999864 212 5789999996 889996 99999987
No 161
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.41 E-value=8.1e-13 Score=96.33 Aligned_cols=96 Identities=18% Similarity=0.272 Sum_probs=67.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEE----EccCCcEEEeecCCCCCCeee
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYS----ITTAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~----v~~~G~L~I~~v~~~D~gg~Y 83 (114)
+.+.+.|.+..+.+|.++.|.|.+.+.+.+ .++|++++..+-.. .....++. ....+.|.|.+++.+|+| .|
T Consensus 182 p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p--~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y 257 (289)
T 3mjg_X 182 INVSVNAVQTVVRQGENITLMCIVIGNEVV--NFEWTYPRKESGRL-VEPVTDFLLDMPYHIRSILHIPSAELEDSG-TY 257 (289)
T ss_dssp CCCEEEESCSEEETTSCEEEEEEEESCSSB--EEEEECTTSSSSCC-CCCEEEESCTTTTEEEEEEEESSCCSSCCE-EE
T ss_pred CCcEEeCCcceeEcCCCEEEEEEECCCCCc--ceEEEcCCccCCCc-ccccccccCCcceEEEEEEEEcccChhhCc-EE
Confidence 457778888899999999999999775433 89999876532100 00001110 112468999999999994 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
+|.|.|.++. .+..+.|.|.....
T Consensus 258 ~C~a~N~~G~---~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 258 TCNVTESVND---HQDEKAINITVVES 281 (289)
T ss_dssp EEEEEETTTT---EEEEEEEEEEEEC-
T ss_pred EEEeecCCCC---ceeEEEEEEEEEec
Confidence 9999999876 45577888876543
No 162
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.41 E-value=1.3e-12 Score=91.58 Aligned_cols=92 Identities=15% Similarity=0.237 Sum_probs=66.0
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC---ee--eeee----eeccCCcEEEcc---CCcEEEeecCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG---VS--EARS----IIHSGGRYSITT---AGALHIRDTGM 76 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~---~~--~~~~----~~~~~~r~~v~~---~G~L~I~~v~~ 76 (114)
.+...|++..+.+|++|.|.|.+.+.+.+ .+.|+|++ .. ++.. ....++||.+.. ++.|.|.+++.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISN--YLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLES 80 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCc--eEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCc
Confidence 34556888999999999999999775322 89999843 11 1000 011357998874 33899999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEE
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V 105 (114)
+|+| .|+|.|.|..+. ..+..+.|.|
T Consensus 81 ~D~G-~Y~C~~~~~~~~--~~~~~~~l~V 106 (213)
T 3r06_A 81 EDIG-SYYCQQYYNYPW--TFGPGTKLEI 106 (213)
T ss_dssp GGCS-EEEEEECSSSSC--EECCCEEEEE
T ss_pred ccCE-EEEEecccCCce--EEcCCceEEE
Confidence 9996 999999986432 3556778888
No 163
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.40 E-value=1.8e-12 Score=91.99 Aligned_cols=85 Identities=22% Similarity=0.331 Sum_probs=69.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
..|.+.|++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+ ..+ .++.|.|.+++.+|+| .|+|.|
T Consensus 19 ~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~--~v~W~~~~~~~-----~~~------~~~~L~i~~v~~~d~G-~Y~C~~ 84 (218)
T 3k0w_A 19 SKITVNPESKAVLAGQFVKLCCRATGHPFV--QYQWFKMNKEI-----PNG------NTSELIFNAVHVKDAG-FYVCRV 84 (218)
T ss_dssp CCEEECCCCEEEETTSBEEEECEETTTTSS--EEEEEETTEEC-----TTC------CSSEEEETTCCGGGCE-EEEEEE
T ss_pred CEEEECCCCeEEeCCCcEEEEeeecCCCCC--EEEEEECCEEC-----CCC------CCCEEEEccCChhhCe-EeEEEE
Confidence 468899999999999999999999775433 89999999853 111 3578999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEecc
Q psy9140 88 THKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|..+. ..+..+.|.|..+
T Consensus 85 ~n~~~~--~~s~~~~l~V~~~ 103 (218)
T 3k0w_A 85 NNNFTF--EFSQWSQLDVCDI 103 (218)
T ss_dssp ECTTCC--EECCCEEEEEECC
T ss_pred EcCCCC--ceeeEEEEEEEcc
Confidence 998654 2567889998865
No 164
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.40 E-value=5.6e-13 Score=92.20 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=68.5
Q ss_pred eeeccceeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCeeeeeee----eccCCcEEEc-cCCcEEEeecCCCCCCeee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGVSEARSI----IHSGGRYSIT-TAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~~~~~~~----~~~~~r~~v~-~~G~L~I~~v~~~D~gg~Y 83 (114)
+...+.+..+.+|.++.|.|.+ .+++.+ .++|+|++..+.... ...+.+|.+. .++.|.|.+++.+|+| .|
T Consensus 110 ~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y 186 (209)
T 1nbq_A 110 KPTVNIPSSATIGNRAVLTCSEQDGSPPS--EYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTG-EY 186 (209)
T ss_dssp CCCCCCBSEEETTSCEEECCCCCSCBSCC--EEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCC-CE
T ss_pred CCCcccccceecCCEEEEEEeCCCCCCCc--eeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCe-EE
Confidence 4444556679999999999997 665444 899999998652110 0112466654 4679999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEec
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+|.|.|..+.. ..|...+|.|++
T Consensus 187 ~C~a~n~~g~~-~~s~~v~l~V~d 209 (209)
T 1nbq_A 187 SCEARNGYGTP-MTSNAVRMEAVE 209 (209)
T ss_dssp EEEEECSSSCC-EECCCBCCEEEC
T ss_pred EEEEeCCcCcc-cccccEEEEEeC
Confidence 99999998653 446677887764
No 165
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.40 E-value=3.5e-13 Score=94.30 Aligned_cols=91 Identities=16% Similarity=0.219 Sum_probs=66.2
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|.+.|+ ..|.+|+++.|.|.+.+. +. .+.|+|++..+.. ....+.....++.|.|.+|+.+|+| .|+|.|
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~--~~-~~~W~k~g~~~~~---~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~a 77 (196)
T 2d3v_A 6 ATLWAEPG-SVISRGNSVTIRCQGTLE--AQ-EYRLVKEGSPEPW---DTQNPLEPKNKARFSIPSMTEHHAG-RYRCYY 77 (196)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTT--CC-EEEEEETTCSSCS---EEECCCSSTTEEEEEESSCCGGGCE-EEEEEE
T ss_pred CEEEeCCC-CcccCCCeEEEEEeCCCC--Cc-EEEEEECCCCCCc---ccccccCCccccEEEeccCChhHCe-EEEEEE
Confidence 45788887 489999999999999763 22 7999999985421 0111111234678999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEec
Q psy9140 88 THKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|..+. ...|..+.|.|.+
T Consensus 78 ~n~~g~-~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 78 YSPAGW-SEPSDPLELVVTG 96 (196)
T ss_dssp EETTEE-CBCCCCEEEEEEC
T ss_pred eCCCCc-CCcCccEEEEecC
Confidence 987432 2245678899886
No 166
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.40 E-value=8.9e-13 Score=95.35 Aligned_cols=100 Identities=17% Similarity=0.204 Sum_probs=69.7
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eee----eeccCCcEEEccCC---cEEEeecCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARS----IIHSGGRYSITTAG---ALHIRDTGM 76 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~----~~~~~~r~~v~~~G---~L~I~~v~~ 76 (114)
....+|.+..|.+|++|+|.|.+.+...+...+.|+|++ ... +.. .....+||.+..++ .|.|++++.
T Consensus 4 ~~v~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (256)
T 3ux9_B 4 IVLTQPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQS 83 (256)
T ss_dssp CCCBCCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred ceEecCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCCh
Confidence 344567788999999999999996642121279999953 111 100 00135799887544 699999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+|+| .|+|.+.|..++....+..+.|.|.++.
T Consensus 84 ~DsG-~Y~C~~~~~~~~~~~~~~~~~l~V~~~~ 115 (256)
T 3ux9_B 84 EDEA-DYYCQVRDNNENEWVFGGGTKLTVLGSG 115 (256)
T ss_dssp GGCE-EEEEEEEETTTTEEEECCCEEEEEC---
T ss_pred hhCE-EEEEEEEECCCCceEECCCEEEEEECCC
Confidence 9995 9999999976555566778899998764
No 167
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.40 E-value=5.3e-13 Score=100.83 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=69.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCC-CCCCcceEEEeeCCeeeeeeeeccCCcEE-EccCCcEEEeecCCCCCCeeeEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPA-YNHNLLLIAWLREGVSEARSIIHSGGRYS-ITTAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~-~~~~~~~vsW~kd~~~~~~~~~~~~~r~~-v~~~G~L~I~~v~~~D~gg~Y~C 85 (114)
|.|...|++..+.+|+++.|.|.+.+ .+.+ .++|+||+..+. ....++. ...+|.|.|.+++.+|+| .|+|
T Consensus 7 P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~--~v~W~k~g~~~~----~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C 79 (395)
T 1bih_A 7 PVLKDQPAEVLFRENNPTVLECIIEGNDQGV--KYSWKKDGKSYN----WQEHNAALRKDEGSLVFLRPQASDEG-HYQC 79 (395)
T ss_dssp CEECCCCSEEEEETTSCEEECCCEESCCSSC--EEEEEESSSBCC----TTTTTEEECTTSCCEEESSCCGGGCE-EEEE
T ss_pred CEeecCCCceEEeCCCEEEEEEEEecCCCCc--eEEEEECCcCcc----cccceEEEecCCceEEEecCCCCCCc-EEEE
Confidence 56889999999999999999999966 3222 899999998641 1222443 456889999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEe
Q psy9140 86 QTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|.|..+. ..+..+.|.|.
T Consensus 80 ~a~n~~g~--~~s~~~~l~v~ 98 (395)
T 1bih_A 80 FAETPAGV--ASSRVISFRKT 98 (395)
T ss_dssp EEEETTEE--EECCCEEEEEE
T ss_pred EEEeCCCe--EEeEEEEEEEE
Confidence 99997643 24556777665
No 168
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.40 E-value=2.7e-13 Score=101.11 Aligned_cols=95 Identities=19% Similarity=0.141 Sum_probs=74.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecC-------CCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIP-------AYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSY 80 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~-------~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~g 80 (114)
+.|...|++..|.+|+++.|.|.+. +.+.+ .+.|+|++..+.. ....+.|+. ..+|.|.|.+++.+|+|
T Consensus 19 p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~--~v~W~k~~~~~~~-~~~~~~~~~-~~~~~L~i~~v~~~D~G 94 (339)
T 3o4o_C 19 RFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRI--NLTWHKNDSARTV-PGEEETRMW-AQDGALWLLPALQEDSG 94 (339)
T ss_dssp EEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCC--BCCCEESSCCSCC-SCCSSSCEE-EETTEEEESSBCTTCCE
T ss_pred HhhCcCceEEEEECCccEEEEeccccccccccCCCCc--eEEEEECCCCccc-CccccccEE-eeCCeEEECCCCcccCE
Confidence 6688999999999999999999996 43332 8999999986421 112255775 45899999999999995
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.|+|.|.|..+ ..+..+.|.|.++..
T Consensus 95 -~Y~C~~~n~~g---~~~~~~~l~V~~~~~ 120 (339)
T 3o4o_C 95 -TYVCTTRNASY---CDKMSIELRVFENTD 120 (339)
T ss_dssp -EEECCEEETTE---EEEEEEEEEEECSCG
T ss_pred -EEEEEEECCcc---eEEEEEEEEEEcCCC
Confidence 99999999754 245677888887654
No 169
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.40 E-value=1.1e-12 Score=87.13 Aligned_cols=94 Identities=21% Similarity=0.273 Sum_probs=61.7
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeee----ee---e------eeccCCcEEEcc------CCcEEEe
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSE----AR---S------IIHSGGRYSITT------AGALHIR 72 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~----~~---~------~~~~~~r~~v~~------~G~L~I~ 72 (114)
.|....|.+|++|.|+|.+.+...... .|.|+|.+... +. + ...-.+|+.+.. +.+|.|+
T Consensus 6 ~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~ 85 (123)
T 4gjt_B 6 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 85 (123)
T ss_dssp CCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEE
T ss_pred cCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEEC
Confidence 466778999999999999865444434 78999965321 00 0 001135776642 3579999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
||+.+|+| .|.|.+.+.-.+. .+..++|.|.|+.
T Consensus 86 ~v~~~DsG-~Y~C~v~t~~~g~--~~~~~~L~VlE~~ 119 (123)
T 4gjt_B 86 NAVQADEG-EYECRVSTFPAGS--FQARLRLRVLEHH 119 (123)
T ss_dssp SCCSSSCS-EEEEEEEESSSCE--EEEEEEEEC----
T ss_pred CCChHHCE-EEEEEEEECCCCe--EEeEEEEEEEECc
Confidence 99999996 9999988743332 4557889988753
No 170
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.40 E-value=1.1e-12 Score=91.92 Aligned_cols=93 Identities=22% Similarity=0.321 Sum_probs=67.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--eee---e----eeeccCCcEEEccCC---cEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--SEA---R----SIIHSGGRYSITTAG---ALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~~~---~----~~~~~~~r~~v~~~G---~L~I~~v~~~ 77 (114)
+...|.+..+.+|.+|.|.|.+.+.+.+ .+.|+|++. .+. + ......+||.+..++ .|.|.+++.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGN--NLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE 81 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCC--CEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChh
Confidence 3455888899999999999999775433 799998542 110 0 001123799887544 8999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+| .|+|.|.|..+. ..+..+.|.|..
T Consensus 82 D~G-~Y~C~~~~~~~~--~~~~~~~l~V~~ 108 (213)
T 3d9a_L 82 DFG-MYFCQQSNSWPY--TFGGGTKLEIKR 108 (213)
T ss_dssp GCE-EEEEEECSSSSC--EECCCEEEEECC
T ss_pred hCE-EEEEeeecCCcc--eeCCCEEEEEec
Confidence 995 999999997542 345567888875
No 171
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.40 E-value=7.8e-13 Score=92.19 Aligned_cols=88 Identities=15% Similarity=0.078 Sum_probs=64.7
Q ss_pred ccceeEEEeCCeEEEEeecCCCCC--Cc-ceEEEeeCCeeeeeeeeccCCcEEEccC------CcEEEeecCCCCCCeee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNH--NL-LLIAWLREGVSEARSIIHSGGRYSITTA------GALHIRDTGMEDSYIRY 83 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~--~~-~~vsW~kd~~~~~~~~~~~~~r~~v~~~------G~L~I~~v~~~D~gg~Y 83 (114)
.++...+.+|+++.|.|.+.+.+. .. +.+.|+|++.. .....+|+.+..+ +.|.|.+|+.+|+| .|
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~----~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y 82 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVEND----TSLQSERATLLEEQLPLGKALFHIPSVQVRDSG-QY 82 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC------CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCE-EE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCc----ccccCCceEEeeccccCCeeEEEECCCCHHHCc-EE
Confidence 445678999999999999976542 11 28999994443 2345678887754 68999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+|.|.|..+. .+....|.|..+
T Consensus 83 ~C~~~~~~~~---~~~~~~l~V~~~ 104 (202)
T 3bp6_B 83 RCLVICGAAW---DYKYLTVKVKAS 104 (202)
T ss_dssp EEEEEETTEE---EEEEEEEEEEBC
T ss_pred EEEEEeCCCc---ceEEEEEEecCC
Confidence 9999997542 355778888764
No 172
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.40 E-value=3.4e-13 Score=94.31 Aligned_cols=92 Identities=17% Similarity=0.245 Sum_probs=67.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|.+.|+ ..|.+|+++.|.|.+.+.+. .+.|+|++..+. .....+.....++.|.|.+|+.+|+| .|+|.|
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~~~---~~~W~k~g~~~~---~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~a 77 (198)
T 1ugn_A 6 PTLWAEPG-SVITQGSPVTLRCQGGQETQ---EYRLYREKKTAP---WITRIPQELVKKGQFPIPSITWEHTG-RYRCYY 77 (198)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTTCC---CEEEEESSSCCH---HHHTSCHHHHTTTEEEESSCCGGGCE-EEEEEE
T ss_pred CeEeccCC-CcccCCCcEEEEEEecCCCc---EEEEEECCcccc---ccccccccCCcccEEEECCCCHHHCe-EEEEEE
Confidence 45778886 58999999999999976432 689999998541 11112222345789999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEec
Q psy9140 88 THKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|..++....|..+.|.|..
T Consensus 78 ~n~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 78 GSDTAGRSESSDPLELVVTG 97 (198)
T ss_dssp EETTTEECCCCCCEEEEEEC
T ss_pred ECCCCCcccCCccEEEEEcc
Confidence 99752211246688899986
No 173
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.40 E-value=1.3e-12 Score=91.62 Aligned_cols=95 Identities=17% Similarity=0.319 Sum_probs=70.2
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcE----EEeecCCCCCCe
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGAL----HIRDTGMEDSYI 81 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L----~I~~v~~~D~gg 81 (114)
..+.|...|++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+.. ......|+ ...+|.| .|.+++.+|+|
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~--~v~W~~~g~~~~~-~~~~~~~~-~~~~~~~~~~l~i~~v~~~d~G- 82 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEP--TIEWFKDGEPVST-NEKKSHRV-QFKDGALFFYRTMQGKKEQDGG- 82 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCC--EEEEEETTEECCC-SSSSSSEE-ECTTSCEEESSCCBSSSCBCCE-
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCC--eEEEEECCcCccC-CCccceeE-EecCCceEEEEEeccCCcccCc-
Confidence 44668899999999999999999999765443 8999999986521 11112333 3456766 68999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|+|.|.|..+. ..+..+.|.|..
T Consensus 83 ~Y~C~~~n~~g~--~~~~~~~l~v~~ 106 (217)
T 2vr9_A 83 EYWCVAKNRVGQ--AVSRHASLQIAV 106 (217)
T ss_dssp EEEEEEEETTEE--EECCCEEEEECE
T ss_pred eEEEEEecCCCc--cccccceEEEEE
Confidence 999999997643 245577887775
No 174
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.40 E-value=8e-13 Score=99.85 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=71.8
Q ss_pred ccceeecccee-EEEeCCeEEEEeecCCCCCCcceEEEee-CCeeeeeeeeccCCcEEEccCCcEEEeecCCCC------
Q psy9140 7 SSDYEINTGNT-FVLRGNIAVLQCNIPAYNHNLLLIAWLR-EGVSEARSIIHSGGRYSITTAGALHIRDTGMED------ 78 (114)
Q Consensus 7 ~~~~~v~~~d~-~v~~G~~AvL~C~~~~~~~~~~~vsW~k-d~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D------ 78 (114)
.|.|..+|.+. .+.+|..+.|.|.+.+.+.+ .++|+| |+..+ ....+.+.+..+|.|.|.+++.+|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p--~v~W~k~~g~~~----~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d 76 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMP--EIIWIRSDGTAV----GDVPGLRQISSDGKLVFPPFRAEDYRQEVH 76 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCC--EEEEEETTSCBC----CCBTTTBEECSTTEEEECCCCGGGCCHHHH
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCC--EEEEEcCCCCcc----ccCCCceEEcCCceEEecccChhhcccccc
Confidence 36788999885 47789999999999765444 899999 66643 122344556789999999999998
Q ss_pred CCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 79 SYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
+ |.|+|.|.|..+. ..|....|.|..+..
T Consensus 77 ~-G~Y~C~a~n~~g~--~~s~~~~v~v~~~p~ 105 (388)
T 2v5m_A 77 A-QVYACLARNQFGS--IISRDVHVRAVVAQY 105 (388)
T ss_dssp E-EEEEEEEEETTEE--EECCCEEEEEECCCC
T ss_pred C-ceEEEEEEccCCe--EEecceEEEEccccc
Confidence 8 5999999998653 346677888775543
No 175
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.39 E-value=1.4e-12 Score=92.82 Aligned_cols=85 Identities=22% Similarity=0.216 Sum_probs=67.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+.+.|.+..+.+|+++.|.|.+.+.+.+. .+.|+||+..+ ..+ .+.|.|.+++.+|+| .|+|.|
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~-~v~W~k~g~~l-----~~~-------~~~L~i~~v~~~D~G-~Y~C~a 73 (204)
T 3sgj_C 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQ-STQWFHNESLI-----SSQ-------ASSYFIDAATVDDSG-EYRCQT 73 (204)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCSSSSCC-CEEEEETTEEE-----SCC-------SSEEEESSCCGGGCE-EEEEEE
T ss_pred CeEEEcCCCeEEECCCCEEEEEcCCCCCCCc-EEEEEECCEEc-----ccC-------ccEEEEecccccCCE-EEEEEe
Confidence 4477889889999999999999997754331 59999999854 111 289999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|.. .+..+.|.|..+..+
T Consensus 74 ~n~~-----~s~~~~l~V~~~p~~ 92 (204)
T 3sgj_C 74 QLST-----LSDPVQLEVHIGWLL 92 (204)
T ss_dssp TTSB-----CCCCEEEEEECSSEE
T ss_pred CCCc-----ccccEEEEEecCceE
Confidence 9842 466889999876543
No 176
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.39 E-value=7.4e-13 Score=94.95 Aligned_cols=73 Identities=11% Similarity=0.139 Sum_probs=57.1
Q ss_pred ceeeccceeEEEeCCeEEEEeecCC-CCCCcceEEEeeCCeeeeeeeeccCCcEEEccC---C--cEEEeecCCCCCCee
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPA-YNHNLLLIAWLREGVSEARSIIHSGGRYSITTA---G--ALHIRDTGMEDSYIR 82 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~-~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~---G--~L~I~~v~~~D~gg~ 82 (114)
||-..+.+..|++|+.+.|.|.+.+ .+.+ .++|+||+..+ ..+.||.+..+ | .|.|.+++.+|+| .
T Consensus 4 p~~~~~~~~~v~eg~~v~l~c~~~~~~P~p--~i~W~kng~~l-----~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G-~ 75 (207)
T 3rbs_A 4 PFTKSELAVEILEKGQVRFWMQAEKLSGNA--KVNYIFNEKEI-----FEGPKYKMHIDRNTGIIEMFMEKLQDEDEG-T 75 (207)
T ss_dssp --CCEEEEEEECGGGCEEEEEECSCCCSCC--EEEEEETTEEE-----CSSSSCEEEECTTTCEEEEEESCCCGGGCE-E
T ss_pred CeeecCCceEEEeCCeEEEEEEEecCCCCC--EEEEEECCEEC-----ccCCCEEEEEeCCCCEEEEEECCCChhhCE-E
Confidence 4445577899999999999999854 3333 89999999964 45667766533 3 5999999999995 9
Q ss_pred eEEEEee
Q psy9140 83 YYCQTTH 89 (114)
Q Consensus 83 Y~C~a~n 89 (114)
|+|.|.|
T Consensus 76 Y~C~a~N 82 (207)
T 3rbs_A 76 YTFQLQD 82 (207)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 9999998
No 177
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.39 E-value=7.8e-13 Score=92.30 Aligned_cols=92 Identities=13% Similarity=-0.030 Sum_probs=66.0
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
.+.+.+.|+. .|.+|++++|.|.+++. + ..+.|+|++..+. .....+.....++.|.|.+|+.+|+| .|+|.
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~--~-~~~~w~k~g~~~~---~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C~ 75 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNYG--A-VEYQLHFEGSLFA---VDRPKPPERINKVKFYIPDMNSRMAG-QYSCI 75 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTT--C-CEEEEEETTEEEE---EECCSSCTTCCEEEEEESSCCGGGCE-EEEEE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCCC--C-CEEEEEECCCccc---ccccccCCCcceeEEEeCcCCcccCe-EEEEE
Confidence 3557788887 89999999999998642 1 2789999998642 11111222234678999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEec
Q psy9140 87 TTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|..+ ....|....|.|.+
T Consensus 76 ~~~~~~-~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 76 YRVGEL-WSEPSNLLDLVVTE 95 (188)
T ss_dssp EEETTE-ECCCCCCEEEEEES
T ss_pred ecCCCC-CCCCCCceEEEecc
Confidence 988532 11246678888874
No 178
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.39 E-value=6.2e-13 Score=93.28 Aligned_cols=94 Identities=16% Similarity=0.183 Sum_probs=67.1
Q ss_pred cceeecc----ceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeee
Q psy9140 8 SDYEINT----GNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 8 ~~~~v~~----~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y 83 (114)
+.|...+ ++..+.+|+++.|.|.+.+.+.+ .+.|+|++..+... ...........++.|.|.+++.+|+| .|
T Consensus 16 P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~--~v~W~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y 91 (231)
T 3ojm_B 16 PYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMP--TMRWLKNGKEFKQE-HRIGGYKVRNQHWSLIMESVVPSDKG-NY 91 (231)
T ss_dssp EEESCGGGGCCSCEEEETTSCEEEECCEEEESCC--EEEEEETTEECCGG-GSTTCCEEEGGGTEEEECSCCGGGCE-EE
T ss_pred CccccccccCceeEEEccCCCEEEEEecccCCCC--eEEEEECCcccccc-ccccceeeecCcceEEEecCCcccCE-EE
Confidence 3454444 78899999999999999765443 89999999864210 01111133344668999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+|.|.|..+. .+..+.|.|..+
T Consensus 92 ~C~~~n~~~~---~~~~~~l~V~~~ 113 (231)
T 3ojm_B 92 TCVVENEYGS---INHTYHLDVVER 113 (231)
T ss_dssp EEEEEETTEE---EEEEEEEEEECC
T ss_pred EEEEecccCc---ccccEEEEEEcC
Confidence 9999997653 455678888753
No 179
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.39 E-value=2.9e-13 Score=98.29 Aligned_cols=96 Identities=14% Similarity=0.191 Sum_probs=68.3
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCC-CCCCcceEEEeeCCeeeeeeeec--cCCcEEEccCCcEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPA-YNHNLLLIAWLREGVSEARSIIH--SGGRYSITTAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~-~~~~~~~vsW~kd~~~~~~~~~~--~~~r~~v~~~G~L~I~~v~~~D~gg~Y 83 (114)
.+.+...|.+..+.+|.++.|.|.+.+ .+.+ .+.|+|++..+...... ....+ ..++.|.|.+++.+|+| .|
T Consensus 186 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G-~Y 260 (289)
T 3ejj_X 186 PPQIKLEPSKLVRIRGEAAQIVCSATNAEVGF--NVILKRGDTKLEIPLNSDFQDNYY--KKVRALSLNAVDFQDAG-IY 260 (289)
T ss_dssp CCEEEEESSSEECCSSSCEEEEEEEEESSSCC--EEEEEETTEECCCCEEEEECSSSE--EEEEEEEESSCCSSSCE-EE
T ss_pred CCeEEecCCceEEEeCCcEEEEEEeCCCCCce--EEEEEECCEEeeccCCcccccceE--EeeEEEEEEeecccCCE-EE
Confidence 355778888888889999999999965 3332 89999999865211100 12222 23578999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
+|.|.|.++. .+..+.|.+.+++.
T Consensus 261 ~C~a~N~~G~---~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 261 SCVASNDVGT---RTATMNFQVVESHH 284 (289)
T ss_dssp EEEEECSSCE---EEEEEEEECC----
T ss_pred EEEEEcCCCC---ccccEEEEEEeccc
Confidence 9999999864 56688888887654
No 180
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.39 E-value=1.5e-12 Score=89.43 Aligned_cols=92 Identities=17% Similarity=0.208 Sum_probs=69.2
Q ss_pred ccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 5 DMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 5 vv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
|..+++.+.+....+.+|.++.|.|.+.+.. +.+.++|+||+..+. .. ..++.|.|.+++.+|+| .|+
T Consensus 83 V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~g~~~~-----~~-----~~~~~L~i~~v~~~d~G-~Y~ 150 (176)
T 1f2q_A 83 VFSDWLLLQASAEVVMEGQPLFLRCHGWRNW-DVYKVIYYKDGEALK-----YW-----YENHNISITNATVEDSG-TYY 150 (176)
T ss_dssp EECSSEEEEESCSEEETTSCEEEEEEEGGGC-CEEEEEEEETTEECC-----SC-----CCSSEEEESSCCGGGCE-EEE
T ss_pred EeCcceeecCCcceeeCCCCEEEEEEecCCC-CceEEEEEECCEEEe-----ee-----cCCCeEEECCCCcccCE-EEE
Confidence 3345566667778899999999999985321 112899999998541 11 13679999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.|.|..++ ..|....|.|.+++.
T Consensus 151 C~a~n~~~~--~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 151 CTGKVWQLD--YESEPLNITVIKAPR 174 (176)
T ss_dssp EEEEETTEE--EECCCEEEEEECSCC
T ss_pred EEEEeCCcc--eEecCEEEEEecCCC
Confidence 999997332 467789999998865
No 181
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.39 E-value=2e-12 Score=86.69 Aligned_cols=91 Identities=18% Similarity=0.221 Sum_probs=60.6
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeee-ee-----------eeccCCcEEEccC------CcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEA-RS-----------IIHSGGRYSITTA------GALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~-~~-----------~~~~~~r~~v~~~------G~L~I 71 (114)
.+.+....+..|++|+|+|.+.+...+.. .|.|+|++.... +. ...-.+|+.+..+ .+|.|
T Consensus 9 t~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I 88 (125)
T 4gos_A 9 TVTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRL 88 (125)
T ss_dssp CEEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEE
T ss_pred EccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEE
Confidence 45566678889999999999854332223 799999764211 00 0112457776532 47999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEE
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V 105 (114)
+||+.+|+| .|+|.+.|..+. .+....|.|
T Consensus 89 ~~v~~~D~G-~Y~C~v~~~~g~---~~~~v~LkV 118 (125)
T 4gos_A 89 KNVQLTDAG-TYKCYIITSKGK---GNANLEYKT 118 (125)
T ss_dssp SSCCGGGCE-EEEEEEEETTEE---EEEEEEEEE
T ss_pred CCCChHHCE-EEEEEEEeCCCe---EEEEEEEEE
Confidence 999999995 999999997542 344555555
No 182
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.38 E-value=2.1e-12 Score=91.56 Aligned_cols=86 Identities=14% Similarity=0.140 Sum_probs=62.1
Q ss_pred eccceeEEEeC--CeEEEEeecCCCCCCcceEEEeeC--CeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 12 INTGNTFVLRG--NIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 12 v~~~d~~v~~G--~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
.+|++..+.+| ++|+|.|.+.+ +.+ .++|.|+ ++.+ +..+.++...+++.|.|.+++.+|+| .|+|.|
T Consensus 12 ~~p~~v~v~eG~~~~v~L~C~~~~-p~~--~v~w~~~~~~g~~----~~~~~~~~~~~~~~l~I~~v~~~D~G-~Y~C~a 83 (213)
T 2x1w_L 12 DQHGVVYITENKNKTVVIPCLGSI-SNL--NVSLCARYPEKRF----VPDGNRISWDSKKGFTIPSYMISYAG-MVFCEA 83 (213)
T ss_dssp --CEEEEECCSTTCEEEECCCBSS-TTC--CEEEEEETTTEEE----CCCSSSCEEETTTEEEEEGGGTTTCS-EEEEEE
T ss_pred CCceEEEEecCCCccEEEeeccCC-CCc--EEEEEhhcCCCcc----ccCCCcccccCCccEEEccCChhcCc-eEEEEE
Confidence 35689999999 99999999864 222 7899885 3432 23456777778899999999999996 999999
Q ss_pred eeccCCcEEeCCCeEEEEec
Q psy9140 88 THKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|. +....|....|.|..
T Consensus 84 ~n~--~~~~~s~~~~l~v~~ 101 (213)
T 2x1w_L 84 KIN--DESYQSIMYIVVVVG 101 (213)
T ss_dssp C------CEECCCEEEEECB
T ss_pred EEC--CeeEEEEEEEEEEeC
Confidence 984 333456567887753
No 183
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.38 E-value=9.4e-13 Score=91.90 Aligned_cols=87 Identities=15% Similarity=0.198 Sum_probs=63.2
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
.+...| +..|.+|.++.|.|.+.+. + ..+.|+||+..+. . .+.....++.|.|.+|+.+|+| .|+|.|.
T Consensus 101 ~i~~~p-~~~v~~G~~v~L~C~~~~~--~-~~~~w~k~g~~~~-----~-~~~~~~~~~~L~I~~v~~~d~G-~Y~C~a~ 169 (188)
T 1oll_A 101 TLSVHP-GPEVISGEKVTFYCRLDTA--T-SMFLLLKEGRSSH-----V-QRGYGKVQAEFPLGPVTTAHRG-TYRCFGS 169 (188)
T ss_dssp EEEEES-CSEEETTCEEEEEEECSSS--C-SEEEEEEESSSCE-----E-EEEECSSEEEEEEEECCGGGCE-EEEEECE
T ss_pred eEEECC-CCccccCCEEEEEEEcCCC--C-CEEEEEECCcccc-----c-cccCCCceeEEEECCCCcCCCc-EEEEEEE
Confidence 344455 5679999999999998542 1 2789999997541 1 1223345789999999999995 9999999
Q ss_pred eccCCcEEeCCCeEEEEe
Q psy9140 89 HKLTGERKISPPSQVMVS 106 (114)
Q Consensus 89 n~l~~~~~~s~~a~L~V~ 106 (114)
|........|.+..|.|+
T Consensus 170 n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 170 YNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EETTEECCCCCCEEEEEE
T ss_pred cCCCcCCCCCCcEEEEec
Confidence 874211235778888886
No 184
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.38 E-value=1.4e-12 Score=92.53 Aligned_cols=88 Identities=14% Similarity=0.243 Sum_probs=68.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|.+..+.+|.++.|.|.+.+.+.+ .++|+|++..+ ..+ .++.|.|.+++.+|+| .|+|.|
T Consensus 119 p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~--~v~W~~~~~~~-----~~~------~~~~L~i~~v~~~d~G-~Y~C~a 184 (218)
T 3k0w_A 119 LQICVEPTSQKLMPGSTLVLQCVAVGSPIP--HYQWFKNELPL-----THE------TKKLYMVPYVDLEHQG-TYWCHV 184 (218)
T ss_dssp CEEEECCCCEEECTTCCEEEECEEEBSSCC--EEEEEETTEEC-----TTC------CSSEEEESSCCGGGCE-EEEEEE
T ss_pred ceEEECCCceeecCCCcEEEEEEecccCCC--eEEEEECCEEC-----CCC------CCCEEEEeecChhcCE-EEEEEE
Confidence 467788888999999999999999665444 89999999854 222 2468999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|..+. ..|....|.|.+...+
T Consensus 185 ~n~~g~--~~s~~~~l~V~~~~~~ 206 (218)
T 3k0w_A 185 YNDRDS--QDSKKVEIIIDELNNL 206 (218)
T ss_dssp ECSSCE--EECCCEEEEECC----
T ss_pred EcCCCC--ceeeeEEEEEeCCccC
Confidence 998654 3677999999875543
No 185
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.38 E-value=1.7e-12 Score=91.18 Aligned_cols=90 Identities=14% Similarity=0.258 Sum_probs=65.4
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eee----eeccCCcEEEccCC---cEEEeecCCCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARS----IIHSGGRYSITTAG---ALHIRDTGMEDSY 80 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~----~~~~~~r~~v~~~G---~L~I~~v~~~D~g 80 (114)
+|++..+.+|.+|.|.|.+.+.+.+ .+.|+|++ ..+ ++. .....+||.+..++ .|.|.+++.+|+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~--~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~- 82 (210)
T 1lk3_L 6 QPPALTVSPGEKLTISCKASESVTS--RMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT- 82 (210)
T ss_dssp CCSEEEECTTSCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC-
T ss_pred CCCcEEEcCCCCEEEEeeCCCccCC--CEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC-
Confidence 3889999999999999999775433 79999853 221 100 00124799887544 899999999999
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|+|.|.|..+. ..+..+.|.|..
T Consensus 83 G~Y~C~~~~~~~~--~~~~~~~l~V~~ 107 (210)
T 1lk3_L 83 AIYFCQQSWNGPL--TFGAGTKLELKR 107 (210)
T ss_dssp EEEEEEECSSSSC--EECCCEEEEECC
T ss_pred eEEEEEEEcCCCc--eeCCCEEEEEcC
Confidence 5999999997542 244566888875
No 186
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.38 E-value=5.7e-13 Score=95.83 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=63.1
Q ss_pred ceeEEEeCCeEEEEeec---CCCCCCcceEEEeeCCeeeee------------eeeccCCcEEEcc---CCcEEEeecCC
Q psy9140 15 GNTFVLRGNIAVLQCNI---PAYNHNLLLIAWLREGVSEAR------------SIIHSGGRYSITT---AGALHIRDTGM 76 (114)
Q Consensus 15 ~d~~v~~G~~AvL~C~~---~~~~~~~~~vsW~kd~~~~~~------------~~~~~~~r~~v~~---~G~L~I~~v~~ 76 (114)
|+..+..|++|+|.|.. .+.+.+ .|+|+|++..+.. ......++|.+.. ++.|.|.+|+.
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~--~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 78 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEI--EVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANI 78 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTS--EEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCG
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCc--EEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCH
Confidence 46789999999999964 333222 8999998753210 0011234565543 34699999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+|+| .|+|.|.|..+. .+..+.|.|..|+.+
T Consensus 79 ~D~G-~Y~C~a~n~~g~---~~~~~~l~V~~p~~~ 109 (203)
T 4fa8_A 79 SHDG-NYLCRMKLGETE---VTKQEHLSVVKPLTL 109 (203)
T ss_dssp GGCE-EEEEEEEETTEE---EEEEEEEEEEEEEEE
T ss_pred HHCe-EEEEEEEcCCCc---EEEEEEEEecCCcee
Confidence 9995 999999997543 566789999877654
No 187
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.38 E-value=1.1e-12 Score=95.41 Aligned_cols=91 Identities=14% Similarity=0.152 Sum_probs=73.0
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
+|...+.+..+.+|.++.|.|.+.+ +.+...++|.+++.. ....+.++.+.+++.|.|.+++.+|+| .|+|.|.
T Consensus 91 ~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a~ 164 (292)
T 4dkd_C 91 PWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGR----PLMRHTNYSFSPWHGFTIHRAKFIQSQ-DYQCSAL 164 (292)
T ss_dssp CEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGC----CCCSSCCEECCSSSCCEETTCCGGGCS-EEEEEEC
T ss_pred cccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCC----ccccCCcccccCCceEEECCCCHHHCe-EEEEEEE
Confidence 4678888999999999999999965 221127999998553 235677998888899999999999996 9999999
Q ss_pred eccCCcEEeCCCeEEEEec
Q psy9140 89 HKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 89 n~l~~~~~~s~~a~L~V~~ 107 (114)
|..+. ..+....|.|..
T Consensus 165 n~~~~--~~s~~~~l~V~~ 181 (292)
T 4dkd_C 165 MGGRK--VMSISIRLKVQK 181 (292)
T ss_dssp STTSC--EECCCEEEEEEC
T ss_pred eCCCc--eeEEEEEEEEeC
Confidence 87543 356688999986
No 188
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.38 E-value=2.5e-12 Score=91.52 Aligned_cols=89 Identities=12% Similarity=0.137 Sum_probs=65.5
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
..+....+....+.+|.++.|.|.+.+.... ..+.|+||+..+.. ...++.|.|.+++.+|+| .|+|.
T Consensus 88 ~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~-~~v~W~k~g~~~~~----------~~~~~~L~i~~v~~~D~G-~Y~C~ 155 (204)
T 3sgj_C 88 IGWLLLQAPRWVFKEEDPIHLRCHSWKNTAL-HKVTYLQNGKGRKY----------FHHNSDFYIPKATLKDSG-SYFCR 155 (204)
T ss_dssp CSSEEEECSCSEEETTCCEEEEEEEGGGCCC-EEEEEEETTEEEEE----------EEECCCEEESSCCGGGCE-EEEEE
T ss_pred cCceEecCCceeEeCCCcEEEEEEecCCCCC-ceEEEEECCcEeec----------ccCCceEEECcCCcccCE-EEEEE
Confidence 3444455556789999999999999543221 28999999986411 113689999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEeccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|.|...+ ..|....|.|.++.
T Consensus 156 a~n~~~~--~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 156 GLVGSKN--VSSETVQITITQGL 176 (204)
T ss_dssp EEETTEE--EECCCEEEEEEC--
T ss_pred EEeCCCc--eecCcEEEEEeCcC
Confidence 9995332 47889999998765
No 189
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.38 E-value=2e-12 Score=92.32 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=69.7
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCC--CcceEEEeeCC--eeeeeee-------eccCCcEEEccCC---cEEEeec
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNH--NLLLIAWLREG--VSEARSI-------IHSGGRYSITTAG---ALHIRDT 74 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~--~~~~vsW~kd~--~~~~~~~-------~~~~~r~~v~~~G---~L~I~~v 74 (114)
.+...|++..+.+|++|.|.|.+.+.+. +...+.|+|++ ..+.... ....+||.+..++ .|.|.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 3566788999999999999999976531 01289999963 2110000 1125799887544 7999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+.+|+| .|+|.|.|..+. ..+..+.|.|..+.
T Consensus 83 ~~~D~G-~Y~C~~~n~~~~--~~~~~~~l~V~~~~ 114 (240)
T 1moe_A 83 EADDVA-TYYCQQTNEDPY--TFGGGTKLEIKGGG 114 (240)
T ss_dssp CGGGCE-EEEEEECSSSSC--CBCCCEEEEECCCS
T ss_pred ChhhCE-EEEEEEccCCce--eecCCEEEEEecCC
Confidence 999995 999999997432 24567889888753
No 190
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.38 E-value=5.3e-13 Score=91.20 Aligned_cols=80 Identities=21% Similarity=0.337 Sum_probs=62.5
Q ss_pred eeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc-CCcEEEeecCCCCCCeeeEEEEeeccCCc
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT-AGALHIRDTGMEDSYIRYYCQTTHKLTGE 94 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~-~G~L~I~~v~~~D~gg~Y~C~a~n~l~~~ 94 (114)
+..+.+|..+.|.|.+.+++.+ .+.|+|++..+ ..+.+|.+.. ++.|.|.+++.+|+| .|+|.|.|..+.
T Consensus 107 ~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~g~~~-----~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a~n~~g~- 177 (189)
T 2v5t_A 107 NATAERGEEMTFSCRASGSPEP--AISWFRNGKLI-----EENEKYILKGSNTELTVRNIINSDGG-PYVCRATNKAGE- 177 (189)
T ss_dssp EEETTSCCCEEEECEEEEESCC--EEEEEETTEEC-----CCSSSEEEETTTTEEEECSCCGGGCE-EEEEEEEETTEE-
T ss_pred cccccCCCcEEEEEEEccCCCC--eEEEEECCEEC-----cCCCcEEEecCCCEEEEcCCChhhCe-eEEEEEEeCCCc-
Confidence 4467789999999999765444 89999999853 4567787764 568999999999995 999999998764
Q ss_pred EEeCCCeEEEEe
Q psy9140 95 RKISPPSQVMVS 106 (114)
Q Consensus 95 ~~~s~~a~L~V~ 106 (114)
.+..+.|.|.
T Consensus 178 --~~~~~~l~V~ 187 (189)
T 2v5t_A 178 --DEKQAFLQVF 187 (189)
T ss_dssp --EEEEEEEEEE
T ss_pred --eeEEEEEEEE
Confidence 3445666664
No 191
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.37 E-value=7.2e-13 Score=90.86 Aligned_cols=83 Identities=10% Similarity=0.135 Sum_probs=65.9
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC---CcEEEeecCC-CCCCeeeEEEEee
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA---GALHIRDTGM-EDSYIRYYCQTTH 89 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~---G~L~I~~v~~-~D~gg~Y~C~a~n 89 (114)
+....+.+|.++.|.|.+.+++.+ .++|+|++..+ ..+.++.+..+ +.|.|.+++. +|+ |.|+|.|.|
T Consensus 110 ~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~~d~-G~Y~C~a~n 181 (197)
T 3lcy_A 110 KEKYYGAVGSTLRLHVMYIGRPVP--AMTWFHGQKLL-----QNSENITIENTEHYTHLVMKNVQRKTHA-GKYKVQLSN 181 (197)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCC--EEEEEETTEEC-----CCCSSEEEEECSSEEEEEESSCCHHHHC-EEEEEEEEC
T ss_pred CcceeecCCCeEEEEEEEeeeeCC--eeEEeECCEEC-----CCCCceEEEEcCCEEEEEEccccchhhC-ceEEEEEEc
Confidence 355678899999999999776544 89999999853 45678877654 6799999995 898 599999999
Q ss_pred ccCCcEEeCCCeEEEEec
Q psy9140 90 KLTGERKISPPSQVMVSE 107 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~~ 107 (114)
.++. .+..+.|.|.+
T Consensus 182 ~~g~---~~~~~~l~V~~ 196 (197)
T 3lcy_A 182 VFGT---VDAILDVEIQD 196 (197)
T ss_dssp SSCE---EEEEEEEEEEC
T ss_pred CcCc---eEEEEEEEEec
Confidence 9864 45577788765
No 192
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.37 E-value=3.1e-12 Score=90.31 Aligned_cols=95 Identities=16% Similarity=0.307 Sum_probs=67.1
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeee-e-----------eccCCcEEEcc-----CCcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARS-I-----------IHSGGRYSITT-----AGALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~-~-----------~~~~~r~~v~~-----~G~L~I~ 72 (114)
.+|+...+.+|++|.|.|.+.+...+...+.|+|++ ..+.+. . ....+||.+.. ++.|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 567788999999999999996543111289999973 322100 0 01257998864 3589999
Q ss_pred ecCCCCCCeeeEEEEeeccCCc-EEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGE-RKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~-~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|+|.|.|..+.. ...+..++|.|..
T Consensus 85 ~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 85 NLKNEDMA-TYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp SCCGGGCE-EEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CCCcccCE-EEEEEEeccCcccceeecCceEEEEec
Confidence 99999995 9999999975322 1345577888876
No 193
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.37 E-value=2.2e-12 Score=92.81 Aligned_cols=98 Identities=17% Similarity=0.259 Sum_probs=67.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeee------------eeccCCcEEEccCC-----c
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARS------------IIHSGGRYSITTAG-----A 68 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~------------~~~~~~r~~v~~~G-----~ 68 (114)
+.+...|.+..+.+|.+|.|.|.+.+.+.+...+.|+|+ +..+... .....+||.+..++ .
T Consensus 132 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 211 (250)
T 3esu_F 132 EVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAY 211 (250)
T ss_dssp ---CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEE
T ss_pred ceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEE
Confidence 346677788899999999999999664322228999997 4432111 01224799987554 6
Q ss_pred EEEeecCCCCCCeeeEEEEeecc-CCcEEeCCCeEEEEe
Q psy9140 69 LHIRDTGMEDSYIRYYCQTTHKL-TGERKISPPSQVMVS 106 (114)
Q Consensus 69 L~I~~v~~~D~gg~Y~C~a~n~l-~~~~~~s~~a~L~V~ 106 (114)
|.|.+++.+|+| .|+|.|.|.. ......+..++|.|.
T Consensus 212 L~I~~v~~~DsG-~Y~C~~~~~~~~~~~~~g~gt~L~V~ 249 (250)
T 3esu_F 212 MQLSSLTSVDSA-VYFCARSGLLRYAMDYWGQGTSVTVS 249 (250)
T ss_dssp EEECSCCGGGCE-EEEEEEECSSTTCCCEECCCEEEEEC
T ss_pred EEECCCCcccCE-EEEEEEecCCCccHhhcCCCcceEec
Confidence 999999999995 9999999721 123345668888885
No 194
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.37 E-value=2.6e-13 Score=96.06 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=64.9
Q ss_pred cceeEEEeCCeEEEEeecCC-CCCCc-c-eEEEeeCCeeeeee--------eeccCCcEEEcc--------CCcEEEeec
Q psy9140 14 TGNTFVLRGNIAVLQCNIPA-YNHNL-L-LIAWLREGVSEARS--------IIHSGGRYSITT--------AGALHIRDT 74 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~-~~~~~-~-~vsW~kd~~~~~~~--------~~~~~~r~~v~~--------~G~L~I~~v 74 (114)
|.+..+.+|++|.|.|.+.+ ...+. . .+.|+|++...... .....+|+.+.. +++|.|.+|
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 56678899999999999833 22222 3 69999997532110 011267887764 678999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+.+|+| .|+|.+.|...+. .+..+.|.|..++.+
T Consensus 86 ~~~D~G-~Y~C~~~~~~~~~--~~~~~~L~V~~~P~~ 119 (221)
T 3eow_R 86 RVEDEG-SYTCLFVTFPQGS--RSVDIWLRVLAKPQN 119 (221)
T ss_dssp SCCCCS-CBEEEEEESSSCS--CEEECCCCCCCCCEE
T ss_pred ChHHCe-EEEEEEEeCCCCc--eEEEEEEEEEECCCc
Confidence 999996 9999999975332 244556666655443
No 195
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.37 E-value=2.4e-12 Score=93.08 Aligned_cols=96 Identities=18% Similarity=0.173 Sum_probs=68.2
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeee----eeccCCcEEEccC---CcEEEeecCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARS----IIHSGGRYSITTA---GALHIRDTGM 76 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~----~~~~~~r~~v~~~---G~L~I~~v~~ 76 (114)
.+...|.+..+.+|++|.|.|.+.+.+.+ .+.|+|++ .. ++.. ....++||.+..+ +.|.|.+++.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGN--NLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET 80 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCc--eEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCCh
Confidence 46678899999999999999999765433 79999963 11 1100 0012579988643 3799999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+|+| .|.|.|.|... ...+..+.|.|..+.
T Consensus 81 ~D~G-~Y~C~~~n~~~--~~~~~~~~L~V~~~~ 110 (242)
T 2znx_A 81 EDFG-MYFCQQSNSXP--YTFGGGTKLEITGGG 110 (242)
T ss_dssp GGCE-EEEEEECSSSS--CEECCCEEEEEC---
T ss_pred HHCE-EEEEeEecCCc--eEECCCEEEEEcCCC
Confidence 9995 99999999742 234567789888754
No 196
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.37 E-value=4.5e-14 Score=115.27 Aligned_cols=93 Identities=16% Similarity=0.194 Sum_probs=0.0
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc-CCcEEEeecCCCCCCeeeEE
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT-AGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~-~G~L~I~~v~~~D~gg~Y~C 85 (114)
.+.|...+.+..+.+|.++.|.|.+.+.+.+ .++|+||+..+ ..+.|+.+.. ++.|.|.+++.+|+| .|+|
T Consensus 666 ~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p--~v~W~k~g~~l-----~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C 737 (772)
T 3v2a_R 666 APTITGNLENQTTSIGESIEVSCTASGNPPP--QIMWFKDNETL-----VEDSGIVLKDGNRNLTIRRVRKEDEG-LYTC 737 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEeecCCCceEEeCCCCEEEEEEeCccCCC--eEEEEECCeEC-----cCCCCeEEcCCCcEEEECcCCHHHCE-EEEE
Confidence 4668888889999999999999999776544 89999999854 3455776654 789999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEecccc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.|.|.++. .+..+.|.|++++.
T Consensus 738 ~a~N~~G~---~~~~~~l~V~~~p~ 759 (772)
T 3v2a_R 738 QACSVLGC---AKVEAFFIIEGAQE 759 (772)
T ss_dssp -------------------------
T ss_pred EEEeCCcc---eeEEEEEEEECCCC
Confidence 99999875 46689999998764
No 197
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.37 E-value=2e-12 Score=83.73 Aligned_cols=92 Identities=15% Similarity=0.233 Sum_probs=64.6
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee----eccCCcEEEccCC---cEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI----IHSGGRYSITTAG---ALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~----~~~~~r~~v~~~G---~L~I~~v~~~ 77 (114)
....|.+..+.+|.+|.|.|.+.+...+ .+.|+|.. .. ++... ....+||.+..++ .|.|++++.+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDD--DMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSE 81 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCC--cEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHH
Confidence 3456788899999999999998654323 78999963 21 21100 0125799886433 7999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+| .|.|.+.+. +...-+..++|.|+
T Consensus 82 DsG-~Y~C~~~~~--~~~~fg~gt~l~V~ 107 (107)
T 1i8k_A 82 DVG-DYYCLQSFN--VPLTFGCGTKLEIK 107 (107)
T ss_dssp GCE-EEEEEECSS--SSCEECCCEEEEC-
T ss_pred HCE-EEEEEEeeC--CCcEECCCeEEEeC
Confidence 995 999999985 23345667788764
No 198
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.37 E-value=4.3e-12 Score=92.43 Aligned_cols=96 Identities=20% Similarity=0.288 Sum_probs=67.2
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee--------eccCCcEEEccC-----CcEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI--------IHSGGRYSITTA-----GALHIRD 73 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~--------~~~~~r~~v~~~-----G~L~I~~ 73 (114)
.+|....+.+|.+|.|.|.+.+.+.+...+.|+|++ ..+ +... ...++||.+..+ +.|.|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (257)
T 1f3r_B 5 LESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNS 84 (257)
T ss_dssp EEECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEES
T ss_pred ECCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECC
Confidence 466778899999999999996653111279999962 211 1000 012579988642 4899999
Q ss_pred cCCCCCCeeeEEEEeeccC------CcEEeCCCeEEEEecc
Q psy9140 74 TGMEDSYIRYYCQTTHKLT------GERKISPPSQVMVSEI 108 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~------~~~~~s~~a~L~V~~~ 108 (114)
++.+|+| .|+|.|.|..+ .....+..+.|.|..+
T Consensus 85 v~~~DsG-~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~ 124 (257)
T 1f3r_B 85 LQTDDTG-TYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSG 124 (257)
T ss_dssp CCTTCCE-EEEEEEESSSSCCSSCCCEEEECCCEEEEECSS
T ss_pred CCcccCE-EEEEEEcccccCccccccccccCCceEEEEEeC
Confidence 9999995 99999999753 2223456778999865
No 199
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.37 E-value=7e-13 Score=94.58 Aligned_cols=76 Identities=14% Similarity=0.239 Sum_probs=55.8
Q ss_pred EEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeec-CCCCCCeeeEEEEeeccCCcEEe
Q psy9140 19 VLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDT-GMEDSYIRYYCQTTHKLTGERKI 97 (114)
Q Consensus 19 v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v-~~~D~gg~Y~C~a~n~l~~~~~~ 97 (114)
.++|.++.|+|. +.+.+ .++|+|++..+ ....+.++....+|.|.|.+| +.+|+| .|+|.|.|..+.
T Consensus 125 ~~~G~~v~L~C~--g~p~p--~i~W~k~~~~l---~~~~~~~~~~~~~~~L~I~~v~~~~D~G-~Y~C~A~N~~g~---- 192 (204)
T 1sy6_A 125 SISGTTVILTCP--QYPGS--EILWQHNDKNI---GGDEDDKNIGSDEDHLSLKEFSELEQSG-YYVCYPRGSKPE---- 192 (204)
T ss_dssp EEETTEEEEECS--CCCSS--CEEEEETTEEE---SCCTTCTTEEEETTEEEETTCCHHHHCE-EEEEEETTSCGG----
T ss_pred eecCCcEEEEcC--CCCCC--ceEEEECCEEC---CCccCCceEecCCCEEEEeeCCccccCE-EEEEEeccCCCC----
Confidence 349999999998 34333 78999999864 222234454446899999999 999995 999999998763
Q ss_pred CCCeEEEEe
Q psy9140 98 SPPSQVMVS 106 (114)
Q Consensus 98 s~~a~L~V~ 106 (114)
...+.|.++
T Consensus 193 ~~s~~l~l~ 201 (204)
T 1sy6_A 193 DANFYLYLR 201 (204)
T ss_dssp GSSCEEEEE
T ss_pred ceeEEEEEE
Confidence 334455544
No 200
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.37 E-value=4.2e-13 Score=95.61 Aligned_cols=77 Identities=19% Similarity=0.238 Sum_probs=55.9
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeee-------------------eccCCcEEEccCCcEEEeec
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSI-------------------IHSGGRYSITTAGALHIRDT 74 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~-------------------~~~~~r~~v~~~G~L~I~~v 74 (114)
+++..+.+|.++.|.|.+.+.+.+ .++|+|++..+.... ..-..+.....++.|.|.++
T Consensus 143 ~~~~~v~~g~~v~L~C~~~g~p~p--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 220 (250)
T 2fbo_J 143 AEVVQVDEGNDITMTCPCTDCANA--NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAA 220 (250)
T ss_dssp CSEEECCTTCCEEECCCEESCTTC--EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSC
T ss_pred CceEEecCCCcEEEEEEecCCCCC--eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecC
Confidence 445677789999999999776555 899999987541100 00013343335689999999
Q ss_pred CCCCCCeeeEEEEeeccCC
Q psy9140 75 GMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~ 93 (114)
+.+|+| .|+|.|.|..+.
T Consensus 221 ~~~D~G-~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 221 KITDAG-RVWCELATGQGE 238 (250)
T ss_dssp CGGGCE-EEEEEEESSSSG
T ss_pred CcccCE-EEEEEecCCccc
Confidence 999995 999999996653
No 201
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.36 E-value=6.7e-13 Score=93.52 Aligned_cols=93 Identities=17% Similarity=0.265 Sum_probs=67.8
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeee----ee----eeccCCcEE----------EccCCcEEEeec
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEA----RS----IIHSGGRYS----------ITTAGALHIRDT 74 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~----~~----~~~~~~r~~----------v~~~G~L~I~~v 74 (114)
.|++..+.+|+++.|.|.+.+... ...+.|+|++.... .. .....+|+. +..+|.|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v 84 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHD-HYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEA 84 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCS-EEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSC
T ss_pred CCCcEEEEcCCCEEEecccCCCCC-ceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEccc
Confidence 578889999999999999976532 12899998755311 00 000134555 888899999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+.+|+| .|+|.|.|...+ ..+..+.|.|..++
T Consensus 85 ~~~D~G-~Y~C~~~~~~~~--~~~~~~~l~V~~~p 116 (231)
T 2pet_A 85 QVGDER-DYVCVVRAGAAG--TAEATARLNVFAKP 116 (231)
T ss_dssp CGGGCE-EEEEEEECGGGC--EEEEEEEEEEEBCC
T ss_pred CcccCc-eEEEEEEecCCC--ceEEEEEEEEEecC
Confidence 999995 999999998633 24567788888664
No 202
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.36 E-value=4.1e-12 Score=82.19 Aligned_cols=87 Identities=22% Similarity=0.252 Sum_probs=62.2
Q ss_pred ceeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCee-eeee-------ee--ccCCcEEEc-cCCcEEEeecCCCCCCee
Q psy9140 15 GNTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGVS-EARS-------II--HSGGRYSIT-TAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 15 ~d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~~-~~~~-------~~--~~~~r~~v~-~~G~L~I~~v~~~D~gg~ 82 (114)
....+.+|++|.|+|.. .+...+ .+.|+|+... +... .. .-.+||.+. .++.|.|+|++.+|+| .
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~~~~~--~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG-~ 87 (110)
T 2ptt_A 11 PDINAYTGSNVTLKIHKDPLGPYR--RITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDKG-T 87 (110)
T ss_dssp CSEEEETTSCEEECSCSSCCCSCS--EEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGCE-E
T ss_pred CCEEEecCCcEEEeCCccCCCCcC--EEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccCe-E
Confidence 45689999999999998 443222 8999995332 2110 00 112699887 5789999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|.|.+.+... .+...+|.|.+|
T Consensus 88 Y~C~v~~~~~----~~~~~~L~V~dp 109 (110)
T 2ptt_A 88 YYMRVLRETE----NELKITLEVFDP 109 (110)
T ss_dssp EEEEEESSSB----CCEEEEEEEECC
T ss_pred EEEEEEcCCC----cEEEEEEEEEcc
Confidence 9999987532 233788988876
No 203
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.36 E-value=2.5e-12 Score=82.03 Aligned_cols=88 Identities=17% Similarity=0.233 Sum_probs=58.8
Q ss_pred ceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCee-------eeee-----eeccCCcEEEcc-----CCcEEEeecCC
Q psy9140 15 GNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVS-------EARS-----IIHSGGRYSITT-----AGALHIRDTGM 76 (114)
Q Consensus 15 ~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~-------~~~~-----~~~~~~r~~v~~-----~G~L~I~~v~~ 76 (114)
++..+.+|.+|.|+|.+.+...+.. .+.|.|++.. +++. .....+||.+.. +++|.|++++.
T Consensus 2 ~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 81 (109)
T 2oyp_A 2 DGYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTL 81 (109)
T ss_dssp EEEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCG
T ss_pred CCEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCC
Confidence 3567889999999999855332222 5899996531 1111 112367888753 36899999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+|+| .|.|.+.|..+. .+..+.|.|.
T Consensus 82 ~D~G-~Y~C~v~~~~~~---~~~~~~l~V~ 107 (109)
T 2oyp_A 82 DDHG-TYCCRIQFPGLM---NDKKLELKLD 107 (109)
T ss_dssp GGCE-EEEEEECCSSTT---CCEEEEEEEE
T ss_pred hhCe-EEEEEEEcCCcc---cceEEEEEEE
Confidence 9995 999999987432 1224555553
No 204
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.36 E-value=2.4e-12 Score=88.55 Aligned_cols=84 Identities=21% Similarity=0.220 Sum_probs=66.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+.+.|.+..+.+|+++.|.|.+.+.+.+. .+.|+|++..+ . ..++.|.|.+++.+|+| .|+|.+
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~-~~~W~~~~~~~-----~-------~~~~~L~i~~~~~~d~G-~Y~C~~ 73 (175)
T 1fnl_A 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSPEDN-STQWFHNESLI-----S-------SQASSYFIDAATVNDSG-EYRCQT 73 (175)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCCBTTBC-CCEEEETTEEE-----E-------SSCSEEEESSCCGGGCE-EEEEEC
T ss_pred CEEEEcCCceeeeCCCcEEEEeeCCCCCCCc-ceEEEECCEEc-----c-------CCceEEEEeCCCcccCE-EEEEEe
Confidence 4577889888999999999999997754332 58999998853 1 13679999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEecccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.|.. .+...+|.|..+..
T Consensus 74 ~n~~-----~s~~~~l~V~~~~~ 91 (175)
T 1fnl_A 74 NLST-----LSDPVQLEVHIGWL 91 (175)
T ss_dssp SSSC-----CCCCEEEEEECSSE
T ss_pred eCCc-----ccccEEEEEeCCCc
Confidence 9842 36688888885543
No 205
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.36 E-value=2.7e-12 Score=89.23 Aligned_cols=82 Identities=15% Similarity=0.125 Sum_probs=62.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+.+.|+. .|.+|+++.|.|.+.+ ..+ .+.|+|++.. ....++.|.|.+++.+|+| .|+|.|
T Consensus 9 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~--~~~W~k~g~~------------~~~~~~~L~i~~v~~~D~G-~Y~C~a 71 (184)
T 2gi7_A 9 PSLQALPSS-LVPLEKPVTLRCQGPP-GVD--LYRLEKLSSS------------RYQDQAVLFIPAMKRSLAG-RYRCSY 71 (184)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECST-TCS--EEEEEETTTC------------CEESSSEEEESSCCGGGCE-EEEEEE
T ss_pred CeEEeCCCc-cccCCCcEEEEEeCCC-CCC--EEEEEECCcc------------ccCcccEEEECcCChhhCc-eEEEEE
Confidence 346777764 8999999999999865 222 8999999862 1235789999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEec
Q psy9140 88 THKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|..+ ....|....|.|.+
T Consensus 72 ~n~~g-~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 72 QNGSL-WSLPSDQLELVATG 90 (184)
T ss_dssp EETTE-EBCCCCCEEEEEES
T ss_pred EcCCC-ccCCCCCEEEEecC
Confidence 99753 12346678888854
No 206
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.36 E-value=4.2e-12 Score=95.94 Aligned_cols=89 Identities=24% Similarity=0.347 Sum_probs=70.3
Q ss_pred eccceeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeec
Q psy9140 12 INTGNTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHK 90 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~ 90 (114)
..+.+..+.+|+++.|.|.+ .+.+.+ .+.|+|++.. ....+.|+.+..+|.|.|.+++.+|.+|.|+|.|.|.
T Consensus 121 ~~~~~~~v~~G~~v~l~C~~~~~~p~~--~v~W~~~~~~----~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~ 194 (404)
T 3p3y_A 121 ENLDPVVVQEGAPLTLQCNPPPGLPSP--VIFWMSSSME----PITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFH 194 (404)
T ss_dssp CCCCCEEEETTSCEEECCCCCCCSSCC--EEEEECTTSC----BCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECT
T ss_pred CCCCCeEEccCCcEEEEeCCCCCCCCC--eEEEeCCCcc----ccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEec
Confidence 44556789999999999998 444333 8999999864 3356789999999999999999999535999999998
Q ss_pred cCCcEEeCCCeEEEEe
Q psy9140 91 LTGERKISPPSQVMVS 106 (114)
Q Consensus 91 l~~~~~~s~~a~L~V~ 106 (114)
.+.....+....|.|.
T Consensus 195 ~~~~~~~~~~~~l~v~ 210 (404)
T 3p3y_A 195 FTHTIQQKNPFTLKVL 210 (404)
T ss_dssp TTCCEEECCCBCEEEE
T ss_pred cccceeccCceeEEEe
Confidence 8765555666677775
No 207
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.36 E-value=3.5e-12 Score=92.59 Aligned_cols=90 Identities=24% Similarity=0.333 Sum_probs=71.8
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+|...+++..+.+|.++.|.|.+.+. +.. .++|++.+.. .+..+.||.+.+++.|.|.+++.+|+| .|+|.|
T Consensus 91 ~~~~~~~~~~v~~g~~v~L~C~~~~~--~~~~~v~W~~~~~~----~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a 163 (289)
T 3ejj_X 91 SWNLLAQEVTVVEGQEAVLPCLITDP--ALKDSVSLMREGGR----QVLRKTVYFFSPWRGFIIRKAKVLDSN-TYVCKT 163 (289)
T ss_dssp SEEESCSEEEEETTSCEEECEEESCG--GGGGSEEEEEGGGE----ECCTTCCEEEETTTEEEESSCCGGGCE-EEEEEE
T ss_pred ceecccceEEEecCCceEeEEEccCC--CcceEEEEEecCCe----ecCCCccEEECCCCCEEEeecccccCE-EEEEEE
Confidence 37888899999999999999999763 222 4999874443 235678999999999999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEec
Q psy9140 88 THKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|. +....+....|.|.+
T Consensus 164 ~~~--~~~~~~~~~~l~V~~ 181 (289)
T 3ejj_X 164 MVN--GRESTSTGIWLKVNR 181 (289)
T ss_dssp EET--TEEEECCCEEEEEES
T ss_pred EeC--CCccccccEEEEEEE
Confidence 953 233467788999983
No 208
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.36 E-value=2.1e-12 Score=94.87 Aligned_cols=91 Identities=15% Similarity=0.200 Sum_probs=68.7
Q ss_pred cceeecccee--EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEE-ccCCcEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNT--FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSI-TTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~--~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v-~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
.+|+++|.+. .|.+|.++.|.|.+ +.+.|...|+|.+.+..+ +|... ..++.|.|+||+.+|+| .|.
T Consensus 6 ~~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--------~~~~~~~~~~~L~I~~v~~~d~G-~Y~ 75 (210)
T 1gsm_A 6 KPLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL--------GAVQSDTGRSVLTVRNASLSAAG-TRV 75 (210)
T ss_dssp CSEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT--------CCEEEESSEEEEEECSCCGGGCE-EEE
T ss_pred CCEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc--------CcEEecCCccEEEECccCcccCc-eEE
Confidence 4788888876 89999999999999 654432189999966421 33333 33457999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|.|.|..+ +.+..++|.|..++..
T Consensus 76 C~a~n~~~---~~~~~~~ltV~~~P~~ 99 (210)
T 1gsm_A 76 CVGSCGGR---TFQHTVQLLVYAFPNQ 99 (210)
T ss_dssp EEEEETTE---EEEEEEEEEEEBCCSE
T ss_pred EEEEeCCC---ceEEEEEEEEEecCCC
Confidence 99999643 3556889999877653
No 209
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.36 E-value=4.1e-12 Score=92.97 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=68.4
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eee---------eeccCCcEEEccC-----CcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARS---------IIHSGGRYSITTA-----GALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~---------~~~~~~r~~v~~~-----G~L~I 71 (114)
..+|++..|.+|.+|.|.|.+.+.+.+...+.|+|++ ..+ +.. ....++||.+..+ +.|.|
T Consensus 4 l~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (256)
T 1nqb_A 4 LQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQL 83 (256)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEE
Confidence 4568888999999999999997653211289999952 221 110 0012579988642 47999
Q ss_pred eecCCCCCCeeeEEEEeeccCC--cEEeCCCeEEEEecccc
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTG--ERKISPPSQVMVSEIAL 110 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~--~~~~s~~a~L~V~~~~~ 110 (114)
.+++.+|+| .|+|.|.|..+. ....+..+.|.|..++.
T Consensus 84 ~~v~~~DsG-~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~ 123 (256)
T 1nqb_A 84 SSLTSEDSA-VYYCARYDYYGSSYFDYWGQGTTVTVSSDIE 123 (256)
T ss_dssp CSCCGGGCE-EEEEEECCTTSSSSCSEECCCEEEEECCCCC
T ss_pred CcCChhhCE-EEEEEEeeccCccceeEEcCceeeeeccccc
Confidence 999999995 999999997541 12234567888876544
No 210
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.36 E-value=5.8e-12 Score=82.25 Aligned_cols=95 Identities=22% Similarity=0.300 Sum_probs=64.5
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeeeeccCCcEEEc-----cCCcEEEeecCCCCCCee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSIIHSGGRYSIT-----TAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~~~~~~r~~v~-----~~G~L~I~~v~~~D~gg~ 82 (114)
+...|++..+.+|++|.|.|.+.+...+...+.|+|+. .... ..+..++||.+. .+..|.|++++.+|+| .
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG-~ 80 (111)
T 2ywz_A 3 VDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNE-KTISIGGRYDETVDKGSKSFSLRISDLRVEDSG-T 80 (111)
T ss_dssp EEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCC-EECCSBTTEEEEEETTTTEEEEEECSCCGGGCE-E
T ss_pred eEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCce-EeeEeCCCEEEEEeCCCCEEEEEECCCChhcCE-E
Confidence 34568889999999999999985432111279999963 2110 012346799763 1347999999999995 9
Q ss_pred eEEEEeeccC---C----cEEeCCCeEEEEe
Q psy9140 83 YYCQTTHKLT---G----ERKISPPSQVMVS 106 (114)
Q Consensus 83 Y~C~a~n~l~---~----~~~~s~~a~L~V~ 106 (114)
|.|.+.|..+ . ...-...++|.|+
T Consensus 81 Y~C~~~~~~~~~~~~~~~~~~fg~GT~l~V~ 111 (111)
T 2ywz_A 81 YKCQADYSPSCYSYPSLESAVEGAGTVLTVK 111 (111)
T ss_dssp EEEEEEECTTTTCSSSCCEEEECCCEEEEEC
T ss_pred EEEEEEcCCccceecCchheEEcCceEEEeC
Confidence 9999998332 1 2334557777774
No 211
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.35 E-value=7e-12 Score=89.97 Aligned_cols=92 Identities=22% Similarity=0.270 Sum_probs=68.7
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee--CCeeeeeee-------eccCCcEEEccC---CcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR--EGVSEARSI-------IHSGGRYSITTA---GALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k--d~~~~~~~~-------~~~~~r~~v~~~---G~L~I~~v~~~ 77 (114)
+...|.+..+.+|.+|.|.|.+.+.+.+ .+.|+| ++..+.... ....+||.+..+ +.|.|.+++.+
T Consensus 138 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 215 (247)
T 2ghw_B 138 LTQSPATLSLSPGERATLSCRASQSVRS--NLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPE 215 (247)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGG
T ss_pred EEccCCEEEecCCCcEEEEEEeCCCccc--eEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHH
Confidence 4556778889999999999999776444 799999 555321100 122578987643 35999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+| .|+|.|.|. +....+..++|.|+
T Consensus 216 D~G-~Y~C~a~~~--~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 216 DFA-VYYCQQRSN--WPPTFGQGTKVEVK 241 (247)
T ss_dssp GCE-EEEEEECSS--SSCEECCCEEEEEC
T ss_pred HCE-EEEEEEccC--CCceEcCCEEEEEC
Confidence 995 999999985 34456778999997
No 212
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.35 E-value=3.7e-12 Score=89.45 Aligned_cols=89 Identities=21% Similarity=0.240 Sum_probs=64.1
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeC-Ceeeeee-------eeccC--CcEEE-ccCCcEEEeecCCCCCCee
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE-GVSEARS-------IIHSG--GRYSI-TTAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd-~~~~~~~-------~~~~~--~r~~v-~~~G~L~I~~v~~~D~gg~ 82 (114)
++...+.+|++|.|+|.+.+ ..+...|.|+|+ +..+... ..... +|+.+ ..+|+|.|++++.+|+| .
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~-~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G-~ 83 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHP-LASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRG-D 83 (180)
T ss_dssp CCEEEEETTSCEEECCCSSC-CCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCE-E
T ss_pred cceEEEEeCCCEEEeCCCCC-CCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCe-E
Confidence 45678999999999999743 122228999995 4332210 01122 79999 68999999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|+|.+.+.. ..+....|.|.++
T Consensus 84 Y~C~v~~~~----~~~~~~~L~V~~~ 105 (180)
T 2dru_A 84 YYMRMLHET----EDQWKITMEVYEM 105 (180)
T ss_dssp EEEEEESSS----EEEEEEEEEEECC
T ss_pred EEEEEEcCC----eEEEEEEEEEECC
Confidence 999998753 3455778888765
No 213
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.35 E-value=3.4e-12 Score=82.88 Aligned_cols=95 Identities=24% Similarity=0.343 Sum_probs=64.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeeeeccCCcEEEc-----cCCcEEEeecCCCCCCee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSIIHSGGRYSIT-----TAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~~~~~~r~~v~-----~~G~L~I~~v~~~D~gg~ 82 (114)
+...|.+..+.+|.+|.|.|.+.+...+...+.|+|+. .... .....++||.+. .+..|.|++++.+|+| .
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG-~ 80 (108)
T 2coq_A 3 VDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKE-QTISIGGRYSETVDEGSNSASLTIRDLRVEDSG-T 80 (108)
T ss_dssp EEEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCE-EECCCBTTEEEEEETTTTEEEEEECSCCGGGCE-E
T ss_pred eEeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcE-EEEEeCCceEEEEcCCCCEEEEEECCCCcccCE-E
Confidence 34568889999999999999985532111279999973 2110 012346899863 2347999999999995 9
Q ss_pred eEEEEeeccC--C--cEEeCCCeEEEEe
Q psy9140 83 YYCQTTHKLT--G--ERKISPPSQVMVS 106 (114)
Q Consensus 83 Y~C~a~n~l~--~--~~~~s~~a~L~V~ 106 (114)
|.|.+.|..+ . ...-...++|.|+
T Consensus 81 Y~C~~~~~~~~~~~~~~~fg~GT~l~V~ 108 (108)
T 2coq_A 81 YKCKAYRRCAFNTGVGYKEGAGTVLTVK 108 (108)
T ss_dssp EEEEEEEEESSCSCSCCEECCCEEEEEC
T ss_pred EEEEEEeCCCCCCCceeeeCCcEEEEeC
Confidence 9999998321 1 2234557778774
No 214
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.35 E-value=9.3e-13 Score=97.11 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=63.6
Q ss_pred ceeeccce-eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeee-ccCCcEEEcc---------CCcEEEeecCCC
Q psy9140 9 DYEINTGN-TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSII-HSGGRYSITT---------AGALHIRDTGME 77 (114)
Q Consensus 9 ~~~v~~~d-~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~-~~~~r~~v~~---------~G~L~I~~v~~~ 77 (114)
.+...+.+ ..+.+|.++.|.|.+.+.+.+ .+.|+||+..+..... ..+.++.+.. .+.|.|.+++.+
T Consensus 210 ~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p--~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 287 (315)
T 1itb_B 210 VIVSPANETMEVDLGSQIQLICNVTGQLSD--IAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESR 287 (315)
T ss_dssp EECSCCSEEEECCSSSCEEEEEEEEECTTS--EEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGG
T ss_pred EEecCCCCcEEEeCCCcEEEEEEEecCCCC--eeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHH
Confidence 34444444 478999999999999776554 7999999986521100 0012333321 238999999999
Q ss_pred C-CCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 D-SYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D-~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
| +| .|+|.|.|.++. .+..+.|.|+
T Consensus 288 d~~G-~Y~C~a~N~~G~---~~~~~~l~v~ 313 (315)
T 1itb_B 288 FYKH-PFTCFAKNTHGI---DAAYIQLIYP 313 (315)
T ss_dssp GGTS-CEEEEEECTTCC---EEEEEEEECC
T ss_pred HcCC-ceEEEEecCCCc---eeEEEEEEec
Confidence 9 95 999999999875 3456677665
No 215
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.35 E-value=1.7e-12 Score=96.46 Aligned_cols=89 Identities=15% Similarity=0.226 Sum_probs=65.5
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEee----CCeeeeeeeeccCCcEEEccCC----------cEEEeecCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR----EGVSEARSIIHSGGRYSITTAG----------ALHIRDTGMED 78 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k----d~~~~~~~~~~~~~r~~v~~~G----------~L~I~~v~~~D 78 (114)
.|.+..+.+|.++.|.|.+.+++.+ .++|+| ++..+ ......++.+..++ .|.|.+++.+|
T Consensus 228 ~~~~~~~~~G~~v~l~C~~~g~p~p--~v~W~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 302 (334)
T 1ry7_B 228 LPANQTAVLGSDVEFHCKVYSDAQP--HIQWLKHVEVNGSKV---GPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFED 302 (334)
T ss_dssp CSCCEEEESSCCEEECCCCBCSSCE--EEEEEECCCGGGCSB---CTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTS
T ss_pred CCCceEEeCCCCEEEEEEEecCCCC--eEEEEECCcCCCccc---cCCCCeeEEEeecCccccccccccEEEEccCCHHH
Confidence 3578889999999999999775444 899999 55532 11112223333322 79999999999
Q ss_pred CCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 79 SYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
+| .|+|.|.|.++. .+..+.|.|.+...
T Consensus 303 ~G-~Y~C~a~N~~G~---~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 303 AG-EYTCLAGNSIGF---SHHSAWLVVLPAEE 330 (334)
T ss_dssp CS-EEEEEEEESSCC---EEEEEEEEEECSCC
T ss_pred CE-EEEEEEeCCCCe---EEEEEEEEEEECCC
Confidence 96 999999999875 45578999987654
No 216
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.35 E-value=5.1e-12 Score=83.92 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=66.5
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee----eccCCcEEEcc---CCcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI----IHSGGRYSITT---AGALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~----~~~~~r~~v~~---~G~L~I~~v~~~ 77 (114)
+...|++..+.+|.+|.|.|.+.+.+.+ .+.|+|.. .. ++... ....+||.+.. +..|.|++++.+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 81 (120)
T 1mqk_L 4 LTQTPVSLSASVGETVTITCRASENIYS--YLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPE 81 (120)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEecCCeEEEcCCCcEEEEEEeCCCCCc--eEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHH
Confidence 3456888999999999999998654322 78999953 21 11100 01257998863 347999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|+| .|.|.+.|... .......++|.|..+.
T Consensus 82 DsG-~Y~C~~~~~~~-~~~fg~gt~L~V~~~~ 111 (120)
T 1mqk_L 82 DFG-SYYCQHHYGTP-PLTFGGGTKLEIKREQ 111 (120)
T ss_dssp GCE-EEEEEECSSSS-SCCBCCCEEEEEC---
T ss_pred HCE-EEEEEEEeCCC-ceEECCCeEEEEecCC
Confidence 995 99999998520 2234668899998653
No 217
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.35 E-value=1.6e-12 Score=97.44 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=65.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCC--CCcceEEEeeCCeeeeeeeeccCCcEEEc-------cCCcEEEeecCCCCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYN--HNLLLIAWLREGVSEARSIIHSGGRYSIT-------TAGALHIRDTGMEDSY 80 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~--~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-------~~G~L~I~~v~~~D~g 80 (114)
..+.|++..+.+|.++.|.|.+.+.+ .+++.+.|+|++..++ ..+.+.... .++.|.|.+|+.+|+|
T Consensus 231 ~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~----~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 306 (329)
T 3oq3_B 231 KLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWII----GLDFGVYSILTSSGGITEATLYFENVTEEYIG 306 (329)
T ss_dssp EEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBC----CBCSSEEEEEEEETTEEEEEEEESSCCGGGTT
T ss_pred ceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeee----ccCCceeeeecccCceeEeEEEEEeccHHHCC
Confidence 33477888999999999999997764 2222789999998642 222332222 4678999999999993
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+.|+|.|.|.++. .+..++|.|+
T Consensus 307 ~~Y~C~a~N~~G~---~~~~~~l~v~ 329 (329)
T 3oq3_B 307 NTYTCRGHNYYFD---KTLTTTVVLE 329 (329)
T ss_dssp CEEEEEEECSSCE---EEEEEEEEEC
T ss_pred CcEEEEEEecCCc---eEEEEEEEeC
Confidence 3999999999864 3445677663
No 218
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.35 E-value=7e-12 Score=83.27 Aligned_cols=95 Identities=15% Similarity=0.172 Sum_probs=67.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee----eccCCcEEEcc---CCcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI----IHSGGRYSITT---AGALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~----~~~~~r~~v~~---~G~L~I~~v~~~ 77 (114)
....|++..+.+|.+|.|.|.+.+...+ .+.|+|.. . .++... ....+||.+.. +..|.|.+++.+
T Consensus 6 v~q~p~~v~v~~G~~vtL~C~~~~~~~~--~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (119)
T 2e27_L 6 MTQSPSSLSASLGGKVTITCKANQDIKK--KIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPE 83 (119)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGG
T ss_pred eEecCCeEEEeCCCCEEEEEEeCCCCCc--eEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChH
Confidence 4456888899999999999998654333 78999953 1 121100 01257998854 337999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|+| .|.|.+.|. +...-...++|.|.+..
T Consensus 84 DsG-~Y~C~~~~~--~~~~fg~GT~l~v~~~~ 112 (119)
T 2e27_L 84 DAA-TYYCLQYDN--FTWTFGGGTKLEIKRAA 112 (119)
T ss_dssp GCE-EEEEEECGG--GCCEECCCEEEEEEC--
T ss_pred HCE-EEEEEEccC--CceEECCCEEEEEeCCC
Confidence 995 999999986 23345668899998643
No 219
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.35 E-value=4.8e-12 Score=89.89 Aligned_cols=83 Identities=19% Similarity=0.324 Sum_probs=56.0
Q ss_pred ceee-ccce-eEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeee------------eccCCcEEEcc------CC
Q psy9140 9 DYEI-NTGN-TFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSI------------IHSGGRYSITT------AG 67 (114)
Q Consensus 9 ~~~v-~~~d-~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~------------~~~~~r~~v~~------~G 67 (114)
+|.| .|.+ ..|.+|++|+|.|.+.+...+.. .|.|+|++....... ..-.+|+.... ++
T Consensus 4 Qf~V~~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~ 83 (226)
T 4f80_A 4 QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKA 83 (226)
T ss_dssp CCEEECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEE
T ss_pred eEEEECCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeE
Confidence 5665 4555 57899999999999854333333 799999875321100 01123554432 34
Q ss_pred cEEEeecCCCCCCeeeEEEEeeccC
Q psy9140 68 ALHIRDTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 68 ~L~I~~v~~~D~gg~Y~C~a~n~l~ 92 (114)
.|.|.+|+.+|+| .|+|.|.|..+
T Consensus 84 ~L~I~~v~~~D~G-~Y~C~a~n~~~ 107 (226)
T 4f80_A 84 ALRIHNVTASDSG-KYLCYFQDGDF 107 (226)
T ss_dssp EEEESSCCGGGCE-EEEEEEEETTE
T ss_pred EEEEeeCchHHCe-eEEEEEECCCc
Confidence 7999999999995 99999999643
No 220
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.35 E-value=2.6e-12 Score=90.17 Aligned_cols=90 Identities=21% Similarity=0.301 Sum_probs=64.6
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeee-------eccCCcEEEccCC---cEEEeecCCCCCCe
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSI-------IHSGGRYSITTAG---ALHIRDTGMEDSYI 81 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~-------~~~~~r~~v~~~G---~L~I~~v~~~D~gg 81 (114)
|++..+.+|++|.|.|.+.+.+.+ .+.|+|++ ..+.... ....+||.+..++ .|.|.+++.+|+|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G- 82 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKN--FAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEA- 82 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGS--CCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCS-
T ss_pred CCeEEEeCCCcEEEEEecCCCCCC--eEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCE-
Confidence 888999999999999998664433 78999853 2211000 0125799886433 7999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|+|.|.|...+....+..+.|.|.
T Consensus 83 ~Y~C~~~n~~~~~~~~~~~~~l~V~ 107 (212)
T 1nfd_E 83 AYYCLSSYGDNNDLVFGSGTQLTVL 107 (212)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEE
T ss_pred EEEEEEEcccCcccccCCceEEEEc
Confidence 9999999843344345667788884
No 221
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.35 E-value=2.2e-12 Score=88.82 Aligned_cols=80 Identities=15% Similarity=0.211 Sum_probs=64.1
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~ 92 (114)
.+.+..+.+|+++.|.|.+.+.+.+ .+.|++++..+ ...++.|.|.+++.+|+| .|+|.|.|..+
T Consensus 103 ~~~~~~v~~g~~~~l~C~~~~~p~~--~v~W~~~~~~~------------~~~~~~L~i~~v~~~d~G-~Y~C~a~n~~~ 167 (184)
T 2ny1_B 103 ANSDTHLLQGQSLTLTLESPPGSSP--SVQCRSPRGKN------------IQGGKTLSVSQLELQDSG-TWTCTVLQNQK 167 (184)
T ss_dssp ESSCSEEETTCCEEEEEECCTTCCC--EEEEECTTSCE------------EEESSEEEESSCCGGGCE-EEEEEEEETTE
T ss_pred CCCCceeecCCCEEEEEEcCCCCCC--EEEEEeCCCcc------------ccCceEEEEecCCcCCCe-EEEEEEEECCc
Confidence 4667789999999999999775433 89999997642 234789999999999995 99999999643
Q ss_pred CcEEeCCCeEEEEecccc
Q psy9140 93 GERKISPPSQVMVSEIAL 110 (114)
Q Consensus 93 ~~~~~s~~a~L~V~~~~~ 110 (114)
..+..+.|.|.+.++
T Consensus 168 ---~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 168 ---KVEFKIDIVVLAFQK 182 (184)
T ss_dssp ---EEEEEEEEEEECCCC
T ss_pred ---eEEEEEEEEEEecCC
Confidence 356688999987654
No 222
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.35 E-value=7e-12 Score=88.75 Aligned_cols=94 Identities=18% Similarity=0.238 Sum_probs=66.9
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeee----eeccCCcEEEc---cCCcEEEeecCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARS----IIHSGGRYSIT---TAGALHIRDTGM 76 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~----~~~~~~r~~v~---~~G~L~I~~v~~ 76 (114)
.+...|++..+.+|++|.|.|.+.+.+.+ .+.|+|++ .. +++. ....++||.+. .++.|.|++|+.
T Consensus 26 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 26 QMTQSPSSLSASVGDRVTITCRASQDVST--AVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eEEeCCCeEEEeCCCcEEEEEecCCCCCc--eEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 35566888999999999999999765322 89999843 11 1100 01235799886 345799999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+|+| .|+|.+.|..+. ..+..+.|.|..
T Consensus 104 ~D~G-~Y~C~~~~~~~~--~~~~~~~l~V~~ 131 (237)
T 3sob_L 104 EDFA-TYYCQQSYTTPP--TFGQGTKVEIKR 131 (237)
T ss_dssp GGCE-EEEEEECSSSSC--EECCCEEEEEEC
T ss_pred hhCe-EEEEeeccCCce--EEcCcEEEEEec
Confidence 9995 999999986432 345577888854
No 223
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.35 E-value=3.1e-12 Score=89.21 Aligned_cols=87 Identities=13% Similarity=0.115 Sum_probs=64.2
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeee---e----ccCCcEEEc-cCCcEEEeecCCCCCCeeeEE
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSI---I----HSGGRYSIT-TAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~---~----~~~~r~~v~-~~G~L~I~~v~~~D~gg~Y~C 85 (114)
++...+.+|++|+|+|.+.+ +...|.|+|++..+.... . .-.+|+.+. .+|+|.|++++.+|+| .|+|
T Consensus 2 ~~~v~~~~G~~VtL~c~~~~---~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG-~Y~C 77 (171)
T 1ccz_A 2 SQQIYGVVYGNVTFHVPSNV---PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDED-EYEM 77 (171)
T ss_dssp EEEEEEETTCCEEECCCCSS---CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCE-EEEE
T ss_pred ccEEEEEcCCCEEEcCCCCC---CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCc-eEEE
Confidence 45678999999999998832 212899999987542110 0 123577775 6899999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEeccc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.|..+ +....|.|.++.
T Consensus 78 ~~~n~~~-----~~~~~L~V~~~~ 96 (171)
T 1ccz_A 78 ESPNITD-----TMKFFLYVLEMV 96 (171)
T ss_dssp ECTTCCS-----CEEEEEEEECCC
T ss_pred EEeCCCC-----cEEEEEEEECcC
Confidence 9998743 446788887653
No 224
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.34 E-value=5.2e-12 Score=90.99 Aligned_cols=97 Identities=16% Similarity=0.184 Sum_probs=68.2
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCC---cceEEEeeCC--eee---ee----eeeccCCcEEEccCC---cEEEe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHN---LLLIAWLREG--VSE---AR----SIIHSGGRYSITTAG---ALHIR 72 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~---~~~vsW~kd~--~~~---~~----~~~~~~~r~~v~~~G---~L~I~ 72 (114)
+.+...|.+..+.+|++|.|.|.+.+.+.. ...+.|+|++ ..+ ++ ......+||.+..++ .|.|.
T Consensus 39 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 118 (254)
T 2c1o_A 39 LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKIS 118 (254)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEEC
Confidence 345666889999999999999999765421 1279999853 211 00 011124799887544 79999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+++.+|+| .|+|.|.|.... ..+..+.|.|..
T Consensus 119 ~v~~~D~G-~Y~C~a~n~~~~--~~~~~~~l~V~~ 150 (254)
T 2c1o_A 119 RVEAEDLG-IYYCVQGSHFPP--TFGAGTKLELKR 150 (254)
T ss_dssp SCCGGGCS-EEEEEECSSSSC--EEBCCEEEEECC
T ss_pred cCCcccCE-EEEEEEEcCcce--EecCCEEEEECC
Confidence 99999995 999999997432 345566788864
No 225
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.34 E-value=2.5e-12 Score=88.37 Aligned_cols=83 Identities=23% Similarity=0.308 Sum_probs=65.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+.+.|.+..+.+|+++.|.|.+.+.+.+. .++|+|++..+ .. .++.|.|.+++.+|+| .|+|.+
T Consensus 5 P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~-~i~W~~~~~~~-----~~-------~~~~L~i~~v~~~d~G-~Y~C~~ 70 (176)
T 1f2q_A 5 PKVSLNPPWNRIFKGENVTLTCNGNNFFEVS-STKWFHNGSLS-----EE-------TNSSLNIVNAKFEDSG-EYKCQH 70 (176)
T ss_dssp CCCEEESSCSEEETTCCEEEECCTTCC-----CCEEEETTEEC-----SC-------CSSEEEECSCCGGGCE-EEEEEC
T ss_pred CEEEcCCCCcceecCCcEEEEEeCCCCCCcc-eEEEEECCeEC-----CC-------CceEEEEeccceecCE-EEEEEc
Confidence 5578899999999999999999997754321 68999999853 11 2689999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.. .+....|.|..+.
T Consensus 71 ~~~~-----~s~~~~l~V~~~~ 87 (176)
T 1f2q_A 71 QQVN-----ESEPVYLEVFSDW 87 (176)
T ss_dssp TTSS-----CCCCEEEEEECSS
T ss_pred CCcc-----ccccEEEEEeCcc
Confidence 9853 3667888888544
No 226
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.34 E-value=2.3e-12 Score=96.66 Aligned_cols=85 Identities=24% Similarity=0.233 Sum_probs=66.3
Q ss_pred eEEEeCCeEEEEeecCCCC-CCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeec--cCC
Q psy9140 17 TFVLRGNIAVLQCNIPAYN-HNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHK--LTG 93 (114)
Q Consensus 17 ~~v~~G~~AvL~C~~~~~~-~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~--l~~ 93 (114)
..+.+|.++.|.|.+.+.+ .+ .++|+|++..+ ...+.||... ++.|.|.+++.+|+| .|+|.|.|. +++
T Consensus 138 ~~~~~G~~v~L~C~~~g~p~~~--~i~W~k~~~~l----~~~~~~~~~~-~~~L~I~~v~~~D~G-~Y~C~a~n~~~~g~ 209 (329)
T 3oq3_B 138 LGTHDKYGIDLYCGILYAKHYN--NITWYKNNQEL----IIDGTKYSQS-GQNLIIHNPELEDSG-RYDCYVHYDDVRIK 209 (329)
T ss_dssp TTSSTTTCEEEECCCCSCCCCC--EEEEEETTEEC----CCSSSSEEEE-TTEEEECSCCGGGCE-EEEEEEEECCTTSS
T ss_pred eEEeCCCcEEEEeccCCCCCCc--eEEEEECCccC----CCCCceEecC-CCEEEEeecChhhCE-EEEEEEEecccCCC
Confidence 3466799999999998765 33 89999999864 2356788877 799999999999995 999999997 654
Q ss_pred cE-EeCCCeEEEEeccc
Q psy9140 94 ER-KISPPSQVMVSEIA 109 (114)
Q Consensus 94 ~~-~~s~~a~L~V~~~~ 109 (114)
.. ..+..+.|.|.+++
T Consensus 210 ~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 210 NDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp SCEEEEEEEEEEEECCC
T ss_pred ceeEEEeeEEEEEECCC
Confidence 32 22335788888665
No 227
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.34 E-value=9.6e-12 Score=87.18 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=65.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCC-CCCcceEEEeeCC---ee--eeee--------eeccCCcEEEcc---CCcEEEe
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAY-NHNLLLIAWLREG---VS--EARS--------IIHSGGRYSITT---AGALHIR 72 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~-~~~~~~vsW~kd~---~~--~~~~--------~~~~~~r~~v~~---~G~L~I~ 72 (114)
+...| +..|.+|.+|.|.|.+.+. +.+ .+.|+|++ .. ++.. .....+||.+.. ++.|.|.
T Consensus 4 v~~~p-~~~v~~G~~v~L~C~~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 4 LTQSS-SASFSLGASAKLTCTLNSQHSTY--TIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp EECCS-EEEEETTSCEEEEEEECGGGTTC--CEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred EEeCC-cEEECCCCcEEEEEECCCCCCCc--EEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 34445 8899999999999999765 222 89999932 11 1000 001125888754 3469999
Q ss_pred ecCCCCCCeeeEEEEeeccCC--cEEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTG--ERKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~--~~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|+|.|.|..+. ....+..+.|.|..
T Consensus 81 ~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 116 (218)
T 3s96_B 81 NIQPEDEA-IYICGVGDTIKEQFVYVFGGGTKVTVLG 116 (218)
T ss_dssp SCCGGGCE-EEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred cCCcccCE-EEEEEEecCCCCceeEEEcCcEEEEEec
Confidence 99999995 999999997641 22456678999984
No 228
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.34 E-value=4.4e-12 Score=91.23 Aligned_cols=97 Identities=18% Similarity=0.170 Sum_probs=67.2
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCC---CcceEEEeeCC--eeeeeee-------eccCCcEEEccCC---cEEEee
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNH---NLLLIAWLREG--VSEARSI-------IHSGGRYSITTAG---ALHIRD 73 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~---~~~~vsW~kd~--~~~~~~~-------~~~~~r~~v~~~G---~L~I~~ 73 (114)
.+...|++..+.+|++|.|.|.+.+.+. ....+.|+|++ ..+.... ....+||.+..++ .|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 3556788999999999999999966541 01279999953 2110000 0125799886533 799999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
++.+|+| .|.|.|.|.... ..+..+.|.|..+
T Consensus 83 v~~~D~G-~Y~C~~~n~~~~--~~~~~~~l~V~~~ 114 (247)
T 1svz_A 83 VEAEDLG-IYYCFQGSHFPP--TFGGGTKLEIKGG 114 (247)
T ss_dssp CCGGGCE-EEEEEECSSSSC--EECCCEEEEEC--
T ss_pred CCHHHCE-EEEEEEccCCcc--EECCCEEEEEECC
Confidence 9999995 999999997432 3455788988875
No 229
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.34 E-value=5.3e-12 Score=92.21 Aligned_cols=85 Identities=12% Similarity=0.122 Sum_probs=69.0
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEE-eeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCe-eeEEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAW-LREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYI-RYYCQTTH 89 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW-~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg-~Y~C~a~n 89 (114)
+.+.+..+.+|.++.|.|.+.+ +. .+.++| .+|+.. +..+.||.+.+++.|.|.+++.+|+ | .|+|.|.|
T Consensus 96 ~~~~~~~~~~g~~v~l~C~~~~-p~-~~~v~W~~~~g~~-----l~~~~~~~~~~~~~L~i~~v~~~d~-G~~Y~C~a~n 167 (290)
T 2o26_X 96 LVGLPLFGKEDSDALVRCPLTD-PQ-VSQYSLIECDGKS-----LPTDLTFVPNPKAGITIKNVKRAYH-RLCVRCAAQR 167 (290)
T ss_dssp CCCCCEEEETTSCEEECCCBSC-CS-CEEEEEEETTSCC-----CCTTCEEEEETTTEEEEESCCGGGT-TCEEEEEEEE
T ss_pred ccccceEEecCCeEEEeCcCCC-CC-CceEEEEeCCCcC-----CCCCCceeeCCCCCEEEecccHHHC-CCEEEEEEEE
Confidence 6777889999999999999974 22 128999 567764 3457899998899999999999999 8 99999999
Q ss_pred ccCCcEEeCCCeEEEEe
Q psy9140 90 KLTGERKISPPSQVMVS 106 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~ 106 (114)
. +....+....|.|.
T Consensus 168 ~--~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 168 D--GTWLHSDKFTLKVR 182 (290)
T ss_dssp T--TEEEECCCEEEEEE
T ss_pred C--CceEEeEEEEEEEE
Confidence 7 33345668899887
No 230
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.34 E-value=5e-12 Score=90.35 Aligned_cols=83 Identities=17% Similarity=0.261 Sum_probs=66.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.|.+.|.+..+.+|+++.|.|.+.+.+.+. .++|+|++..+ .. .++.|.|.+++.+|+| .|+|.|
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~-~~~W~~~g~~~-----~~-------~~~~l~i~~~~~~d~G-~Y~C~~ 67 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSS-STQWFLNGTAT-----QT-------STPSYRITSASVNDSG-EYRCQR 67 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEECSSCCCTT-CEEEEETTEEC-----SC-------CSSEEEESSCCGGGCE-EEEEEE
T ss_pred CeEecCCCcEEeeCCCeEEEEEECCCCCCCc-eEEEEECCEEe-----ec-------cCCeEEEecCCcccCe-EEEEEE
Confidence 5688999999999999999999997654331 79999999853 11 1678999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.. .+....|.|..+.
T Consensus 68 ~~~~-----~s~~~~l~v~~~~ 84 (262)
T 3rjd_A 68 GLSG-----RSDPIQLEIHRGW 84 (262)
T ss_dssp SSSC-----CCCCEEEEEECSS
T ss_pred ecCC-----ccccEEEEEeccc
Confidence 9853 3557888887654
No 231
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.34 E-value=5e-12 Score=86.36 Aligned_cols=84 Identities=13% Similarity=0.177 Sum_probs=64.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+...|.+..+.+|.++.|.|.+.+++.+. .++|+|++..+. . ... .++.|.|.++ +|+ |.|+|.|
T Consensus 99 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-~v~W~~~~~~~~-----~-~~~---~~~~L~i~~~--~d~-G~Y~C~a 165 (182)
T 1rhf_A 99 PFFTVEPKDLAVPPNAPFQLSCEAVGPPEPV-TIVWWRGTTKIG-----G-PAP---SPSVLNVTGV--TQS-TMFSCEA 165 (182)
T ss_dssp CEEEECCCCEEECTTCCEEEEEEEECSSSCC-EEEEEETTEECS-----C-SEE---SSEEEEECCC--SSC-EEEEEEE
T ss_pred CeEEecCcceEecCCCEEEEEeEecCCCCCC-EEEEEcCCeECC-----C-CCC---CceEEEEecc--ccC-eEEEEEE
Confidence 4577888888999999999999997754331 799999998641 1 111 5789999999 588 5999999
Q ss_pred eeccCCcEEeCCCeEEEEe
Q psy9140 88 THKLTGERKISPPSQVMVS 106 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~ 106 (114)
.|.++. ..|..+.|.|+
T Consensus 166 ~N~~g~--~~s~~~~l~Vk 182 (182)
T 1rhf_A 166 HNLKGL--ASSRTATVHLQ 182 (182)
T ss_dssp EETTEE--EECCCEEEEEC
T ss_pred ECCCCC--cccceEEEEeC
Confidence 999764 24558888875
No 232
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.33 E-value=6.3e-12 Score=88.15 Aligned_cols=93 Identities=18% Similarity=0.213 Sum_probs=64.8
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCC--cc-eEEEeeCCeeeeeee----------eccCCcEEEccC------CcEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHN--LL-LIAWLREGVSEARSI----------IHSGGRYSITTA------GALHIRD 73 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~--~~-~vsW~kd~~~~~~~~----------~~~~~r~~v~~~------G~L~I~~ 73 (114)
.++...+.+|++|.|.|.+.+.+.. .. .+.|+|++..+.... ....+|+.+..+ +.|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 3455689999999999998544321 12 899999874432100 111378888654 3899999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|+.+|+| .|+|.|.| .+. .+..+.|.|..+..
T Consensus 87 v~~~D~G-~Y~C~~~~--~~~--~~~~~~l~V~~~~~ 118 (222)
T 3sbw_C 87 VKLQDAG-VYRCMISY--GGA--DYKRITVKVNAPYN 118 (222)
T ss_dssp CCGGGCE-EEEEEEES--SSE--EEEEEEEEEEBCCC
T ss_pred cccccCe-EEEEEEEe--CCC--ceeEEEEEEECCCC
Confidence 9999995 99999999 232 34467888886654
No 233
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.33 E-value=5.8e-12 Score=90.55 Aligned_cols=94 Identities=17% Similarity=0.230 Sum_probs=67.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeee----eeccCCcEEEccCC---cEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARS----IIHSGGRYSITTAG---ALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~----~~~~~~r~~v~~~G---~L~I~~v~~~ 77 (114)
+...|++..+.+|++|.|.|.+.+.+.+ .+.|+|++. .++.. .....+||.+..++ .|.|++++.+
T Consensus 7 v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 7 LIQSTSSLSASLGDRVTISCRASQDIRN--YLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp EECSCSEEEECTTCCEEEEEEESSCCTT--CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEecCCEEEeeCCCcEEEEEEecccCCc--eEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 4456888899999999999999775544 799999641 11100 01235789876544 7999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|+| .|.|.|.|..+. ..+..+.|.|..+
T Consensus 85 D~G-~Y~C~~~n~~~~--~~~~~~~l~V~~~ 112 (250)
T 3esu_F 85 DIG-TYFCQQGNTLPW--TFGGGTKLEIRRG 112 (250)
T ss_dssp GCE-EEEEEECSSSSC--EECCCEEEEEC--
T ss_pred hCE-EEEEEEeeCCCc--eECCCEEEEEECC
Confidence 995 999999997543 3566778988864
No 234
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.33 E-value=7.9e-13 Score=96.94 Aligned_cols=79 Identities=11% Similarity=0.109 Sum_probs=58.4
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc-CCcEEEeecCCCCCCeeeEE
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT-AGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~-~G~L~I~~v~~~D~gg~Y~C 85 (114)
.+|.-+.|.+..+.+|+++.|.|.+.+..+. ..+.|+|++..+ ..+.||.+.. ++.|.|.+++.+|+| .|+|
T Consensus 6 ~~P~~~~~~~~~v~~G~~v~l~C~~~~~~p~-~~v~W~~~~~~~-----~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C 78 (317)
T 2y25_A 6 TGPHFVEYLSWEVTGECNVLLKCKVANIKKE-THIVWYKDEREI-----SVDEKHDFKDGICTLLITEFSKKDAG-IYEV 78 (317)
T ss_dssp SCCEEEEEEEEEEETTTEEEEEEEEESCCTT-CEEEEEETTEEE-----CCSCC-----CCEEEEETTCCSTTCS-CEEE
T ss_pred CCCcEeeeeeEEECCCCeEEEEEEEcCCCCC-CEEEEEECCeEc-----CCCCcEEEECCeEEEEEccCCcccCe-EEEE
Confidence 3443347778999999999999998654211 189999999854 4566776653 358999999999996 9999
Q ss_pred EEeeccC
Q psy9140 86 QTTHKLT 92 (114)
Q Consensus 86 ~a~n~l~ 92 (114)
.|.|..+
T Consensus 79 ~~~n~~g 85 (317)
T 2y25_A 79 ILKDDRG 85 (317)
T ss_dssp EEESSSC
T ss_pred EEECCCC
Confidence 9999765
No 235
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.33 E-value=7.5e-12 Score=92.60 Aligned_cols=100 Identities=22% Similarity=0.264 Sum_probs=70.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--e---eeeee---------eccCCcEEEcc-----CCc
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--S---EARSI---------IHSGGRYSITT-----AGA 68 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~---~~~~~---------~~~~~r~~v~~-----~G~ 68 (114)
+....+|++..+.+|++|.|.|.+.+...+...+.|+|++. . ++... ...++||.+.. ++.
T Consensus 27 ~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 106 (282)
T 1qok_A 27 QVKLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAY 106 (282)
T ss_dssp CCEEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEE
T ss_pred eEEEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEE
Confidence 44567899999999999999999866431112799999641 1 11100 11257998864 257
Q ss_pred EEEeecCCCCCCeeeEEEEeeccC--CcEEeCCCeEEEEecc
Q psy9140 69 LHIRDTGMEDSYIRYYCQTTHKLT--GERKISPPSQVMVSEI 108 (114)
Q Consensus 69 L~I~~v~~~D~gg~Y~C~a~n~l~--~~~~~s~~a~L~V~~~ 108 (114)
|.|.+++.+|+| .|.|.+.|..+ .....+..++|.|..+
T Consensus 107 L~I~~v~~~DsG-~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~ 147 (282)
T 1qok_A 107 LQLSSLTSEDTA-VYYCNEGTPTGPYYFDYWGQGTTVTVSSG 147 (282)
T ss_dssp EEECSCCGGGCE-EEEEEEECSSSSCCCEEECCCEEEEEEC-
T ss_pred EEECcCChhhCE-EEEEEeccCCCccceeeeCCCEEEEEecC
Confidence 999999999995 99999999754 1233456778998865
No 236
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.33 E-value=1.4e-11 Score=79.41 Aligned_cols=90 Identities=17% Similarity=0.190 Sum_probs=59.6
Q ss_pred eeEEEeCCeEEEEeecCCCCCCc--c-eEEEeeCCeeeeeeee-----------ccCCcEEEc-cCCcEEEeecCCCCCC
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNL--L-LIAWLREGVSEARSII-----------HSGGRYSIT-TAGALHIRDTGMEDSY 80 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~--~-~vsW~kd~~~~~~~~~-----------~~~~r~~v~-~~G~L~I~~v~~~D~g 80 (114)
+..+.+|++|.|.|.+.+.+.+. . .+.|+|++...++... .-.+|+.+. .+++|.|+||+.+|+|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~G 82 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKG 82 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGCE
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChHHCE
Confidence 46789999999999985432221 1 5999998653211000 113577664 4689999999999995
Q ss_pred eeeEEEEeeccCCcEEe--CCCeEEEEe
Q psy9140 81 IRYYCQTTHKLTGERKI--SPPSQVMVS 106 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~--s~~a~L~V~ 106 (114)
.|.|.+.+..+...+. -...+|.|.
T Consensus 83 -~Y~C~v~~~~~~~~~~~~~~~~~L~V~ 109 (110)
T 1ncn_A 83 -LYQCIIHHKKPTGMIRIHQMNSELSVL 109 (110)
T ss_dssp -EEEEEEEEECSSSEEEEEEEEEEEEEE
T ss_pred -EEEEEEEcCCCCceEEEEEEEEEEEEe
Confidence 9999999876543221 115566664
No 237
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.33 E-value=4.4e-12 Score=85.97 Aligned_cols=88 Identities=17% Similarity=0.174 Sum_probs=65.2
Q ss_pred ccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 5 DMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 5 vv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
|..++....+.+..+.+|.++.|.|.+.+... ...+.|+||+..+.. ...++.|.|.+++.+|+| .|+
T Consensus 83 v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~~~~----------~~~~~~L~i~~v~~~d~G-~Y~ 150 (170)
T 3ry4_A 83 VLFEWLVLQTPHLEFQEGETIMLRCHSWKDKP-LVKVTFFQNGKSQKF----------SHLDPTFSIPQANHSHSG-DYH 150 (170)
T ss_dssp EECCSEEEECSCSEECTTCCEEEEEEEGGGCC-EEEEEEEETTEEEEE----------ESSCCEEEESSCCGGGCE-EEE
T ss_pred EECCceEecCCCceeecCCeEEEEEECCCCCC-CceEEEEECCeEccc----------cCCCCeEEEEeccccCCE-EEE
Confidence 33344556666778999999999999843211 128999999986411 123678999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEe
Q psy9140 85 CQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|.|.|..+. ..|....|.|+
T Consensus 151 C~a~n~~g~--~~s~~~~l~V~ 170 (170)
T 3ry4_A 151 CTGNIGYTL--FSSKPVTITVQ 170 (170)
T ss_dssp EEEEETTEE--EECCCEEEEEC
T ss_pred EEEEeCcCc--cccccEEEEEC
Confidence 999998753 46778888774
No 238
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.33 E-value=3.7e-12 Score=84.38 Aligned_cols=99 Identities=18% Similarity=0.241 Sum_probs=65.7
Q ss_pred eeeccceeEEEeCCeEEEEeecCC-CCCCcceEEEeeCCeee----eeee-------------------eccC--CcEEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPA-YNHNLLLIAWLREGVSE----ARSI-------------------IHSG--GRYSI 63 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~-~~~~~~~vsW~kd~~~~----~~~~-------------------~~~~--~r~~v 63 (114)
+...|+...+.+|.+|.|+|.+.+ ...+...+.|+|++... ++.. ...+ +|+.+
T Consensus 7 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 86 (135)
T 1xt5_A 7 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 86 (135)
T ss_dssp EECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEE
T ss_pred EeCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEE
Confidence 344577889999999999999732 11121289999976431 1100 0022 78988
Q ss_pred cc--CCcEEEeecCCCCCCeeeEEEEeeccCC--cEEeCCCeEEEEeccc
Q psy9140 64 TT--AGALHIRDTGMEDSYIRYYCQTTHKLTG--ERKISPPSQVMVSEIA 109 (114)
Q Consensus 64 ~~--~G~L~I~~v~~~D~gg~Y~C~a~n~l~~--~~~~s~~a~L~V~~~~ 109 (114)
.. +++|.|++|+.+|+| .|.|.+.|.-.. ....+....|.|+.++
T Consensus 87 ~~~~~~sL~I~~v~~~D~G-~Y~C~v~~~~~~~~~g~~~~~~~L~V~g~~ 135 (135)
T 1xt5_A 87 ANLAAPTLRLTHVHPQDGG-RYWCQVAQWSIRTEFGLDAKSVVLKVTGHT 135 (135)
T ss_dssp SCTTSCCEEECSCCGGGCE-EEEEEEECSSCCSGGGEEEEEEEEEEETTC
T ss_pred ecCCCCeEEECCCChhhCc-EEEEEEEcCCccccccccceeEEEEEecCC
Confidence 64 478999999999995 999999985321 0122346788887653
No 239
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.33 E-value=3.3e-12 Score=92.05 Aligned_cols=89 Identities=12% Similarity=0.124 Sum_probs=63.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTH 89 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n 89 (114)
+...| +..|.+|.++.|.|...+.+.+ .+.|+||+..+. . .+.....++.|.|.+|+.+|+| .|+|.|.|
T Consensus 109 i~~~p-~~~v~~G~~v~L~C~~~~~~~~--~~~W~k~g~~~~-----~-~~~~~~~~~~L~I~~v~~~D~G-~Y~C~a~n 178 (218)
T 1uct_A 109 LSADR-GLVLMPGENISLTCSSAHIPFD--RFSLAKEGELSL-----P-QHQSGEHPANFSLGPVDLNVSG-IYRCYGWY 178 (218)
T ss_dssp EEESS-CSEECTTCCCEEEEECSSSCCS--EEEEEETTCSSC-----C-SEEECSSSEEEECCSCCGGGCE-EEEEEEEC
T ss_pred EEeCC-CCccCCCCCEEEEEeCCCCCCC--EEEEEECCCccc-----c-cccCCCccCEEEEccCCcccCE-EEEEEEEc
Confidence 44555 6789999999999955332222 899999998541 1 2333445789999999999995 99999998
Q ss_pred ccCCc--EEeCCCeEEEEecc
Q psy9140 90 KLTGE--RKISPPSQVMVSEI 108 (114)
Q Consensus 90 ~l~~~--~~~s~~a~L~V~~~ 108 (114)
..... ...|.+..|.|+..
T Consensus 179 ~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 179 NRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp TTSTTEECCCCCCEEEEEC--
T ss_pred CCCCCcCCCCCCcEEEEEecC
Confidence 63211 23567889999854
No 240
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.33 E-value=8.6e-12 Score=89.45 Aligned_cols=94 Identities=16% Similarity=0.236 Sum_probs=66.1
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC----------------CeeeeeeeeccCCcEEEcc----CCc
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE----------------GVSEARSIIHSGGRYSITT----AGA 68 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd----------------~~~~~~~~~~~~~r~~v~~----~G~ 68 (114)
.+...|++..+.+|.+|.|.|.+.+...+ .+.|+|. +..+. .....+||.+.. ++.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~~ 78 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQAT--TMFWYRQFPKQSLMLMATSNEGSKATYE--QGVEKDKFLINHASLTLST 78 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCC--SEEEEEECTTSCCEEEEEECTTSCCEEC--TTCCGGGEEEEEEETTEEE
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCce--EEEEEEECCCCCcEEEEEEccCCCceec--CcccCCcEEEEecCCCEEE
Confidence 35667888999999999999998765333 7999992 22110 001127998864 237
Q ss_pred EEEeecCCCCCCeeeEEEEeeccCC-cEEeCCCeEEEEec
Q psy9140 69 LHIRDTGMEDSYIRYYCQTTHKLTG-ERKISPPSQVMVSE 107 (114)
Q Consensus 69 L~I~~v~~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~~ 107 (114)
|.|.+|+.+|+| .|+|.+.|..++ ....+..+.|.|..
T Consensus 79 L~I~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 117 (246)
T 4dzb_B 79 LTVTSAHPEDSS-FYICSARTSGDFGEQFFGPGTRLTVLE 117 (246)
T ss_dssp EEECSCCGGGCE-EEEEEECCSSGGGCCEECCCEEEEEES
T ss_pred EEECCCCHHHCE-EEEEEEecCCCCcceEEcCCEEEEEec
Confidence 999999999995 999999976321 22345677888874
No 241
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.33 E-value=4.4e-12 Score=87.31 Aligned_cols=80 Identities=21% Similarity=0.307 Sum_probs=58.4
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeee-------------eccCCcEEEcc------CCcEEEe
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSI-------------IHSGGRYSITT------AGALHIR 72 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~-------------~~~~~r~~v~~------~G~L~I~ 72 (114)
.|++..|.+|++|.|.|.+.+.+.+.. .|+|+|++..+.... ....+|+.... +++|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 466789999999999999977655544 699999876532100 11234555432 4679999
Q ss_pred ecCCCCCCeeeEEEEeeccCC
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
+++.+|+| .|.|.+.|..++
T Consensus 85 ~v~~~D~G-~Y~C~~~~~~~~ 104 (218)
T 4frw_A 85 NAVQADEG-EYECRVSTFPAG 104 (218)
T ss_dssp SCCGGGCE-EEEEEEEEETTE
T ss_pred eccHHHCC-ceeEEEEeccCc
Confidence 99999995 999999987543
No 242
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.32 E-value=5e-12 Score=91.09 Aligned_cols=90 Identities=14% Similarity=0.095 Sum_probs=64.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEE-EccCC--cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYS-ITTAG--ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~-v~~~G--~L~I~~v~~~D~gg~Y~ 84 (114)
+.+.+.|. ..|.+|++++|.|.+.+ ..+ .+.|+||+..+. . ...++. ...++ .|.|.+|+.+|+| .|+
T Consensus 10 P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~--~~~W~k~g~~~~---~-~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~ 80 (218)
T 1uct_A 10 PFISAKSS-PVIPLDGSVKIQCQAIR-EAY--LTQLMIIKNSTY---R-EIGRRLKFWNETDPEFVIDHMDANKAG-RYQ 80 (218)
T ss_dssp CCEEESSC-SEEETTCCEEEEECCCT-TCS--EEEEEEEETTEE---E-ECSEECC----CCCEEEECSCCGGGCE-EEE
T ss_pred CEEEecCC-CccCCCCCEEEEEEcCC-CCC--EEEEEECCCccc---c-cccccCCCCcceeeEEEEcccccccCE-EEE
Confidence 45778887 68999999999999865 222 899999987541 1 111221 12345 8999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEec
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|.|..+ ....|....|.|.+
T Consensus 81 C~a~n~~~-~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 81 CQYRIGHY-RFRYSDTLELVVTG 102 (218)
T ss_dssp EEEEETTT-EEEECCCEEEEEEC
T ss_pred EEEEcCCC-ceeecCCEEEEEcC
Confidence 99999743 33457788898875
No 243
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=99.32 E-value=2.5e-12 Score=84.94 Aligned_cols=90 Identities=19% Similarity=0.251 Sum_probs=60.8
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCC-cc-eEEEeeCCe-----ee-ee-----eeec----cCCcEEEccCC--------
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHN-LL-LIAWLREGV-----SE-AR-----SIIH----SGGRYSITTAG-------- 67 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~-~~-~vsW~kd~~-----~~-~~-----~~~~----~~~r~~v~~~G-------- 67 (114)
.|....+.+|.+|.|.|.+.+...+ .. .+.|+|++. .+ ++ .... -.+|+.+..++
T Consensus 8 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~ 87 (128)
T 3r0n_A 8 VLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTE 87 (128)
T ss_dssp CCSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCC
T ss_pred cCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccc
Confidence 4667789999999999998543322 23 789999631 01 11 0111 23788887654
Q ss_pred ------cEEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEE
Q psy9140 68 ------ALHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 68 ------~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V 105 (114)
+|.|+|++.+|+| .|+|.+.+.-.+ ..+..+.|.|
T Consensus 88 ~~~~~~sL~I~~v~~~D~G-~Y~C~v~~~~~g--~~~~~~~L~V 128 (128)
T 3r0n_A 88 AELQDATLALHGLTVEDEG-NYTCEFATFPKG--SVRGMTWLRV 128 (128)
T ss_dssp CBCSBCCEEECSCCGGGCE-EEEEEEEEETTE--EEEEEEEEEC
T ss_pred cCCCCeEEEEccCCchhCe-EEEEEEEeCCCC--CcccEEEEEC
Confidence 8999999999995 999998765434 2444566654
No 244
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.32 E-value=5.2e-12 Score=99.73 Aligned_cols=94 Identities=17% Similarity=0.223 Sum_probs=68.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--eeeeee-------eccCCcEEEccCC---cEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--SEARSI-------IHSGGRYSITTAG---ALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~~~~~~-------~~~~~r~~v~~~G---~L~I~~v~~~ 77 (114)
...+|++..|.+|++|.|.|.+.+.+.+ .++|+|++. .+.... ...++||.+..++ .|.|.+|+.+
T Consensus 3 v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (523)
T 2rcj_C 3 VLTQPPSASGTPGQRVTISCTGTSSGSI--TVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAE 80 (523)
T ss_pred ccccCCceEEecCCcEEEEEEEeccCCc--eEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChh
Confidence 3456889999999999999999765333 899999852 110000 1124799875433 7999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+| .|+|.|.|..++....+..++|.|.
T Consensus 81 D~G-~Y~C~a~n~~g~~~~~~~~~~l~V~ 108 (523)
T 2rcj_C 81 DES-DYYCASWNSSDNSYVFGTGTKVTVL 108 (523)
T ss_pred hCE-EEEEEEccCCCccccccCceEEEec
Confidence 995 9999999986544344567888884
No 245
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.32 E-value=2.9e-12 Score=91.03 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=62.1
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCC-CCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcE---EEeecCCCCCCeee
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAY-NHNLLLIAWLREGVSEARSIIHSGGRYSITTAGAL---HIRDTGMEDSYIRY 83 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~-~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L---~I~~v~~~D~gg~Y 83 (114)
+++...+....+.+|..+.|.|.+.+. +.+ .++|+|++..++. ....++....+|.+ .|-+++.+|+| .|
T Consensus 119 ~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p--~i~W~k~~~~~~~---~~~~~~~~~~~g~~~v~s~l~v~~~d~G-~Y 192 (226)
T 4f80_A 119 ALGSDLHVDVKGYKDGGIHLECRSTGWYPQP--QIQWSNNKGENIP---TVEAPVVADGVGLYAVAASVIMRGSSGE-GV 192 (226)
T ss_dssp BCCCCCEEEEEEEETTEEEEEEEEEEEBSCC--EEEEECTTSCBCC---CEECCCEECTTSCEEEEEEEEECC-----CE
T ss_pred cceecccceeeeccCCceeeEEEeccCCCCC--EEEEEECCceEcC---CCceEEEECCCCcEEEEEEEEechhcCc-EE
Confidence 345556667789999999999998653 333 8999998765421 22234444556654 34578999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+|.|.|.++++ +..+.|.|.+|
T Consensus 193 tC~a~N~~g~~---~~~~~v~v~ep 214 (226)
T 4f80_A 193 SCTIRSSLLGL---EKTASISIADP 214 (226)
T ss_dssp EEEEEETTTTE---EEEEEECCCTT
T ss_pred EEEEEeCCCCe---EEEEEEEECCC
Confidence 99999998764 45678888775
No 246
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.32 E-value=8.4e-12 Score=88.94 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=64.7
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eee-------eeccCCcEEEcc----CCcEEEee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARS-------IIHSGGRYSITT----AGALHIRD 73 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~-------~~~~~~r~~v~~----~G~L~I~~ 73 (114)
+...|++..+.+|++|.|.|. .+.+.+ .+.|+|++ ..+ ++. .....+||.+.. ++.|.|.+
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~--~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 79 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHN--NMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILEL 79 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCS--EEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESS
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCc--cEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEec
Confidence 456788999999999999999 443333 89999962 211 000 011256888863 34799999
Q ss_pred cCCCCCCeeeEEEEeeccCC--cEEeCCCeEEEEeccc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTG--ERKISPPSQVMVSEIA 109 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~--~~~~s~~a~L~V~~~~ 109 (114)
|+.+|+| .|+|.|.|..+. ....+..+.|.|..+.
T Consensus 80 v~~~DsG-~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~ 116 (238)
T 2p1y_A 80 ATPSQTS-VYFCASGDLGQTNERLFFGHGTKLSVLGSA 116 (238)
T ss_dssp CCGGGCE-EEEEEEEC------CEEECCCEEEEEECCC
T ss_pred CCcccCe-eEEEEEEeCCCccccceeCCCeEEEEeccC
Confidence 9999995 999999997531 2233456788887543
No 247
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.32 E-value=4.4e-12 Score=92.39 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=69.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee--CCeeeeeee-------eccCCcEEEccC---CcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR--EGVSEARSI-------IHSGGRYSITTA---GALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k--d~~~~~~~~-------~~~~~r~~v~~~---G~L~I~~v~~~ 77 (114)
+...|.+..+.+|.+|.|.|.+.+.+.+ .+.|+| ++..+.... ....+||.+..+ +.|.|.+++.+
T Consensus 142 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 219 (257)
T 1f3r_B 142 LTQSPSLLSASVGDRVTLSCKGSQNINN--YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPE 219 (257)
T ss_dssp SCEETSEECCCTTCCEEEEEECSSCCBT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGG
T ss_pred EEccCCEEEEcCCCCEEEEEEECCcCCC--cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChh
Confidence 3445667789999999999999765433 799999 555321100 012578987543 37999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|+| .|.|.|.|.. ...+..++|.|+++..
T Consensus 220 D~G-~Y~C~a~n~~---~~~g~gt~l~V~~~~~ 248 (257)
T 1f3r_B 220 DVA-TYFCYQYNNG---YTFGAGTKLELKAAEQ 248 (257)
T ss_dssp GCS-EEEEEEESSS---EEECCCCEECCSSSCC
T ss_pred hCE-EEEEEEeCCC---CeECCCEEEEEeCCCc
Confidence 995 9999999964 3567788999986543
No 248
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.32 E-value=3.7e-12 Score=93.84 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=68.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeee----eeccCCcEEEccCC---cEEEeecC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARS----IIHSGGRYSITTAG---ALHIRDTG 75 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~----~~~~~~r~~v~~~G---~L~I~~v~ 75 (114)
..+...|++..+.+|++|.|.|.+.+.+.+ .+.|+|++. .++.. ....++||.+..++ .|.|++++
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~--~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVST--AVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCC--cEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 457778999999999999999999765433 799998652 11110 00125799887655 79999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.+|+| .|+|.|.|..+. ..+..+.|.|..+
T Consensus 91 ~~DsG-~Y~C~~~n~~~~--~~~~~~~l~V~~~ 120 (276)
T 3auv_A 91 PEDFA-TYYCQQHYTTPP--TFGCGTKVEIKGG 120 (276)
T ss_dssp GGGCE-EEEEEECSSSSC--CCCCCEEEEC---
T ss_pred hhhCE-EEEEEEecCCcc--cccCCEEEEEecC
Confidence 99995 999999997432 2344678888765
No 249
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.32 E-value=8.9e-12 Score=90.23 Aligned_cols=95 Identities=20% Similarity=0.289 Sum_probs=67.6
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeee------------eeccCCcEEEccCCc-----EE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARS------------IIHSGGRYSITTAGA-----LH 70 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~------------~~~~~~r~~v~~~G~-----L~ 70 (114)
+.+.|.+..|.+|++|.|.|.+.++..+...+.|+|. +..+... .....+||.+..++. |.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 4577889999999999999998764322228999992 2211100 012247998875443 99
Q ss_pred EeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.+|+.+|+| .|.|.|.|.... ..+..+.|.|.+
T Consensus 84 I~~v~~~DsG-~Y~C~~~~~~~~--~~~~~~~l~V~~ 117 (253)
T 3uzq_A 84 LSSLTSGDTA-VYYCSRGWEGFA--YWGQGTLVTVSA 117 (253)
T ss_dssp ECSCCGGGCE-EEEEEECSSSCC--EECCCEEEEECS
T ss_pred eCCCCcccCE-EEEEEEeeCCcc--EECCCcEEEEec
Confidence 9999999995 999999995332 345688898885
No 250
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.32 E-value=9.8e-12 Score=90.49 Aligned_cols=97 Identities=15% Similarity=0.221 Sum_probs=69.8
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeee-----eeccCCcEEEc-----cCCcEEEe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARS-----IIHSGGRYSIT-----TAGALHIR 72 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~-----~~~~~~r~~v~-----~~G~L~I~ 72 (114)
+.+...|++..+.+|++|.|.|.+.+.+.+ .+.|+|.. .. ++.. ....++||.+. .++.|.|+
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~ 81 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATP--YLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKA 81 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCC--EEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEES
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCc--eEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEEC
Confidence 456778889999999999999999665333 89999842 11 1100 01236788882 24469999
Q ss_pred ecCCCCCCeeeEEEEeeccCC-cEEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTG-ERKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|.|.|.|..++ ....+..+.|.|.+
T Consensus 82 ~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 82 SVHRSDSA-VYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp SCCGGGCS-EEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred CCCcccCE-EEEEEEecCCCccceEECCCeEEEEeC
Confidence 99999996 999999997542 23455678899886
No 251
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=1.4e-11 Score=82.62 Aligned_cols=99 Identities=18% Similarity=0.153 Sum_probs=66.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCee---eeeeee-ccCCcEEEcc--------CCcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVS---EARSII-HSGGRYSITT--------AGALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~---~~~~~~-~~~~r~~v~~--------~G~L~I~~v~~~ 77 (114)
+...|+...+.+|.+|.|.|.+.+.... ..+.|+|++.. +++... ...+||.... +..|.|++++.+
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~-~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 89 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPV-GPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPA 89 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSC-CCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTT
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCC-ceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHH
Confidence 3445678899999999999998654211 17899998631 221110 0114665421 468999999999
Q ss_pred CCCeeeEEEEeeccC---CcEEeCCCeEEEEecccc
Q psy9140 78 DSYIRYYCQTTHKLT---GERKISPPSQVMVSEIAL 110 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~---~~~~~s~~a~L~V~~~~~ 110 (114)
|+| .|.|.+.+... .+...+..++|.|..+..
T Consensus 90 DsG-~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s 124 (136)
T 2d9c_A 90 DAG-TYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS 124 (136)
T ss_dssp TCE-EEEEEEEECCSSSCEEEEECCCEEEEEECCCC
T ss_pred HCE-EEEEEEEeCCCCcccceeeCCCeEEEEEeCCC
Confidence 995 99999998532 122345688999987653
No 252
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.31 E-value=3.9e-13 Score=100.25 Aligned_cols=95 Identities=12% Similarity=0.140 Sum_probs=70.0
Q ss_pred ceeeccceeEEEeCCeEEEEeec---CCCCCCcceEEEeeCCeeeeee----eeccCCcEEEccCC------cEEEeecC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNI---PAYNHNLLLIAWLREGVSEARS----IIHSGGRYSITTAG------ALHIRDTG 75 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~---~~~~~~~~~vsW~kd~~~~~~~----~~~~~~r~~v~~~G------~L~I~~v~ 75 (114)
.+...+++..+.+|.++.|.|.+ .+.+.++ .+.|++++..+... ....+.|+.+..+| .|.|.+++
T Consensus 228 ~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~-~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~ 306 (339)
T 3o4o_C 228 VIISPLKTISASLGSRLTIPCKVFLGTGTPLTT-MLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVT 306 (339)
T ss_dssp EECCCSCCCCCCCCSCCCCCCCEEESSSCCSSC-EEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSC
T ss_pred EEecCCceeEeccCCCEEEEEEEECCCCCCCCc-eEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEec
Confidence 45555667789999999999999 6654222 89999998764210 13456778777788 89999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.+|+||.|+|.|.|.++. .+..+.|.+..
T Consensus 307 ~~d~~G~Y~C~a~N~~G~---~~~~~~~~~~~ 335 (339)
T 3o4o_C 307 REDLHMDFKCVVHNTLSF---QTLRTTVKEHH 335 (339)
T ss_dssp CCSCCCCCEEEEEETTEE---ECCBCCCCC--
T ss_pred hhhcCccEEEEEEeccCc---eEEEEEhhHhc
Confidence 999845999999999874 46666665543
No 253
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.31 E-value=7.4e-12 Score=99.72 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=72.8
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeec--------cCCcEEEccCC------cEEEee
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIH--------SGGRYSITTAG------ALHIRD 73 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~--------~~~r~~v~~~G------~L~I~~ 73 (114)
+.|...+++..+.+|.++.|.|.+.+..+++ .+.|+|++......... ..+|+.+..+| .|.|.+
T Consensus 113 p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 191 (585)
T 2ocw_A 113 PGLLNDTKVYTVDLGRTVTINCPFKTENAQK-RKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQ 191 (585)
T ss_pred ccccCCCccEEEEcCCCEEEEEEecCCCCCc-cEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEcc
Confidence 4577888999999999999999997543222 78999998642111111 24788887766 699999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
++.+|+| .|+|.|.|..+. .+..+.|.|..+
T Consensus 192 v~~~D~G-~Y~C~a~n~~g~---~~~~~~l~V~~~ 222 (585)
T 2ocw_A 192 LRLSDAG-QYLCQAGDDSNS---NKKNADLQVLKP 222 (585)
T ss_pred CChhHCe-EEEEEeccCCcc---ccceEEEEEccC
Confidence 9999995 999999998654 466888988864
No 254
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.31 E-value=5e-12 Score=91.84 Aligned_cols=99 Identities=20% Similarity=0.267 Sum_probs=59.3
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC---Cee--eeeee-------e---ccCCcEEEc----cCC
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE---GVS--EARSI-------I---HSGGRYSIT----TAG 67 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd---~~~--~~~~~-------~---~~~~r~~v~----~~G 67 (114)
.+.++..|++..+.+|++|.|.|.+.+.+.+ .+.|+|. ... ++... . ..+.++... .+.
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 79 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTG--YIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNL 79 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----C--EEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCC
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCc--EEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeE
Confidence 3456778899999999999999999765433 8999982 221 11100 0 011333321 234
Q ss_pred cEEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 68 ALHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 68 ~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|.|++|+.+|+| .|.|.+.|..+.....+..+.|.|.++
T Consensus 80 ~L~I~~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 119 (259)
T 3omz_A 80 RMILRNLIENDSG-VYYCATWDQNYYKKLFGSGTSLVVTDK 119 (259)
T ss_dssp EEEESSCCGGGCE-EEEEEEECTTSSCEEECCCEEEEEEC-
T ss_pred EEEECCCCcccCE-EEEEEEeeCCccccEECCCCEEEEecC
Confidence 6999999999995 999999997654445677889999874
No 255
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.31 E-value=9.6e-12 Score=90.01 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=67.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCC---cceEEEeeCCe--e---eeee----eeccCCcEEEccCC---cEEEeec
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHN---LLLIAWLREGV--S---EARS----IIHSGGRYSITTAG---ALHIRDT 74 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~---~~~vsW~kd~~--~---~~~~----~~~~~~r~~v~~~G---~L~I~~v 74 (114)
+...|++..+.+|++|.|.|.+.+.+.. ...+.|+|++. . +++. .....+||.+..++ .|.|.++
T Consensus 37 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 116 (252)
T 3bkj_L 37 MTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRV 116 (252)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCC
Confidence 4455889999999999999999765410 12899999652 1 1110 01124799887555 8999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+.+|+ |.|+|.|.|.... ..+..++|.|..
T Consensus 117 ~~~D~-G~Y~C~~~~~~~~--~~~~~~~l~V~~ 146 (252)
T 3bkj_L 117 EAEDL-GVYYCFQASLVPL--TFGAGTKLELKR 146 (252)
T ss_dssp CGGGC-EEEEEEECSBSSC--EECCCEEEEECC
T ss_pred CcccC-EEEEEEEEcCCcc--EECCCEEEEEeC
Confidence 99999 5999999997432 344567888864
No 256
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.31 E-value=1.4e-11 Score=89.34 Aligned_cols=95 Identities=20% Similarity=0.270 Sum_probs=69.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeeee-------eccCCcEEEccCC---cEEEeecC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSI-------IHSGGRYSITTAG---ALHIRDTG 75 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~-------~~~~~r~~v~~~G---~L~I~~v~ 75 (114)
+.+...|.+..+.+|.+|.|.|.+.+.+.++ .+.|+|. +..+.... ...++||.+..++ .|.|.+++
T Consensus 150 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 228 (256)
T 3juy_B 150 IVLTQAPGTLSLSPGERATFSCRSSHSIRSR-RVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVE 228 (256)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCTTC-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEEEecCCeEEEeCCCCEEEEEEECCCcCCe-eEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCC
Confidence 3567788899999999999999997644312 7999983 22211000 0135788886545 49999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.+|+| .|.|.|.|. +....+..++|.|+
T Consensus 229 ~~DsG-~Y~C~~~~~--~~~~~g~gt~l~V~ 256 (256)
T 3juy_B 229 PEDFA-LYYCQVYGA--SSYTFGQGTKLERK 256 (256)
T ss_dssp GGGCS-EEEEEECCS--SCCEECCCEEEEEC
T ss_pred HhHCE-EEEEEEeeC--CCceEcCCEEEEEC
Confidence 99996 999999995 34456778899885
No 257
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.31 E-value=3.9e-12 Score=88.75 Aligned_cols=88 Identities=15% Similarity=0.168 Sum_probs=62.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcE---EEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRY---SITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~---~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
+...|. ..+.+|.++.|.|.+.+. +..+.|.|++..+. ....+. ....++.|.|.+|+.+|+| .|+|.
T Consensus 103 ~~~~~~-~~v~~G~~v~L~C~~~~~---~~~~~w~k~g~~~~----~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~ 173 (196)
T 3p2t_A 103 LSALPS-PLVTSGKSVTLLCQSRSP---MDTFLLCKERAAHP----LLCLRSEHGAQQHQAEFPMSPVTSVHGG-TYRCF 173 (196)
T ss_dssp EEEESC-SEECTTCCEEEEEEEEEE---EEEEEEEETTCCCG----GGSEEEEEEEEEEEEEEEECSCCGGGCE-EEEEE
T ss_pred EEeCCc-ceecCCCeEEEEEecCCC---CCEEEEEeCCCccc----ceeecccccccCcceEEEeCCCcccCCC-eEEEE
Confidence 444443 378899999999998541 22789999998541 111111 2234689999999999995 99999
Q ss_pred EeeccCCc--EEeCCCeEEEEe
Q psy9140 87 TTHKLTGE--RKISPPSQVMVS 106 (114)
Q Consensus 87 a~n~l~~~--~~~s~~a~L~V~ 106 (114)
|.|..+.. ...|.+..|.|+
T Consensus 174 a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 174 SSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp EECGGGTTEECCCCCCEEEEEC
T ss_pred EEcCCCCcccCCCCCCEEEEeC
Confidence 99987522 235668888875
No 258
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.31 E-value=1.8e-12 Score=102.43 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=69.4
Q ss_pred eeEEEeCCeEEEEeecCCCCCCcce-EEEeeCCeeeeeeeeccCCcEEEccCC-------cEEEeecCCCCCCeeeEEEE
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNLLL-IAWLREGVSEARSIIHSGGRYSITTAG-------ALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~~~-vsW~kd~~~~~~~~~~~~~r~~v~~~G-------~L~I~~v~~~D~gg~Y~C~a 87 (114)
+..+.+|.++.|.|.+.+++.+ . ++|+|++..+. ....||....++ .|.|.+++.+|+| .|+|.|
T Consensus 322 ~~~v~~G~~v~l~C~~~g~P~p--~~v~W~k~g~~~~----~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a 394 (524)
T 2ec8_A 322 TVFVNDGENVDLIVEYEAFPKP--EHQQWIYMNRTFT----DKWEDYPKSENESNIRYVSELHLTRLKGTEGG-TYTFLV 394 (524)
T ss_dssp EEEECTTCCEEEEEEEEEESCC--CEEEEESSSCBCS----SSBCCEESCCSSSCCEEEEEEEECSCCGGGCE-EEEEEE
T ss_pred eEEEcCCCcEEEEEEEeecCCC--cEEEEEECCeecc----CCccceeEEccCCCceeEEEEEEeecCcccCe-EEEEEE
Confidence 6889999999999999776544 5 99999998641 222377766544 8999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEecccccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIALPL 112 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~~~ 112 (114)
.|..+. .+..+.|.|..++.+.
T Consensus 395 ~N~~g~---~~~~~~l~V~~~P~i~ 416 (524)
T 2ec8_A 395 SNSDVN---AAIAFNVYVNTKPEIL 416 (524)
T ss_dssp ECSSCE---EEEEEEEEECEEEEEE
T ss_pred EecCce---EEEEEEEEEecCCeEe
Confidence 998764 4557899998887664
No 259
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.30 E-value=1.2e-11 Score=86.46 Aligned_cols=98 Identities=18% Similarity=0.308 Sum_probs=67.6
Q ss_pred eeec-cceeEEEeCCeEEEEeecCCCC----CCcc-eEEEeeCCee-----eeeee-------eccCCcEEEcc-----C
Q psy9140 10 YEIN-TGNTFVLRGNIAVLQCNIPAYN----HNLL-LIAWLREGVS-----EARSI-------IHSGGRYSITT-----A 66 (114)
Q Consensus 10 ~~v~-~~d~~v~~G~~AvL~C~~~~~~----~~~~-~vsW~kd~~~-----~~~~~-------~~~~~r~~v~~-----~ 66 (114)
|.++ |++..+.+|.+|+|.|.+.+.. ..+. .+.|+|++.. +++.. ....+||.+.. +
T Consensus 2 ~~~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 81 (214)
T 2zg1_A 2 YELQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKN 81 (214)
T ss_dssp CEEECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTB
T ss_pred ceeeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCe
Confidence 4444 7888999999999999985320 0123 8999998753 11100 12347999864 3
Q ss_pred CcEEEeecCCCCCCeeeEEEEeeccCCcEE-eCCCeEEEEecc
Q psy9140 67 GALHIRDTGMEDSYIRYYCQTTHKLTGERK-ISPPSQVMVSEI 108 (114)
Q Consensus 67 G~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~-~s~~a~L~V~~~ 108 (114)
++|.|++++.+|+| .|.|.+.|..+.... .+....|.|.++
T Consensus 82 ~sL~I~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~l~V~~~ 123 (214)
T 2zg1_A 82 CSLSIGDARMEDTG-SYFFRVERGRDVKYSYQQNKLNLEVTAL 123 (214)
T ss_dssp CCEEECSCCGGGCE-EEEEEEEETTTEEEECCSSCEEEEEECC
T ss_pred EEEEEccCCHhhCc-eEEEEEEcCCCceeeecCCceEEEEecC
Confidence 47999999999995 999999986422111 235788988864
No 260
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.30 E-value=3.3e-11 Score=86.30 Aligned_cols=96 Identities=23% Similarity=0.397 Sum_probs=64.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceee--e-ee-----eecc---CCcEEEccCC----cEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSE--A-RS-----IIHS---GGRYSITTAG----ALH 70 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~--~-~~-----~~~~---~~r~~v~~~G----~L~ 70 (114)
..+...|++..+.+|++|+|.| ..+...+ .+.|+|. +... + .. .... ++||.+..++ .|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~--~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~ 79 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHL--YFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLK 79 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCC--EEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEE
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCC--EEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEE
Confidence 3466778899999999999999 4443222 8999982 1110 0 00 0011 2899987532 799
Q ss_pred EeecCCCCCCeeeEEEEeeccCC-cEEeCCCeEEEEec
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTG-ERKISPPSQVMVSE 107 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~~ 107 (114)
|++|+.+|+| .|+|.+.+...+ ....+..+.|.|..
T Consensus 80 I~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (245)
T 4ei6_B 80 IQPTALEDSA-VYFCASSFWGAYAEQFFGPGTRLTVLE 116 (245)
T ss_dssp ECSCCGGGCE-EEEEEEECSSTTCCCEECCCEEEEEES
T ss_pred ECCCCHhHCE-EEEEEEccCCCcceEEEcCCcEEEEec
Confidence 9999999995 999999964211 22356677888874
No 261
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.30 E-value=1e-11 Score=87.03 Aligned_cols=90 Identities=19% Similarity=0.203 Sum_probs=64.2
Q ss_pred cceeEEEeCCeEEEEeecCCCCCC-cceEEEeeCC--eeeeeee-------eccCCcEEEccCC---cEEEeecCCCCCC
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHN-LLLIAWLREG--VSEARSI-------IHSGGRYSITTAG---ALHIRDTGMEDSY 80 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~-~~~vsW~kd~--~~~~~~~-------~~~~~r~~v~~~G---~L~I~~v~~~D~g 80 (114)
|++..+.+|.+|.|.|.+.+.+.+ ...+.|+|++ ..+.... ....+||.+..++ .|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 889999999999999998665421 1279999963 2210000 0225799876543 8999999999994
Q ss_pred eeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 81 IRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 81 g~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|+|.|.|..+ ...+..+.|.|.
T Consensus 87 -~Y~C~~~~~~~--~~~~~~~~l~V~ 109 (212)
T 1q0x_L 87 -IYFCALWSNNK--LVFGGGTKLTVL 109 (212)
T ss_dssp -EEEEEEECSSC--EEECCCEEEEEC
T ss_pred -EEEEEEecCch--hhcCCCeEEEEe
Confidence 99999999743 234556788884
No 262
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.30 E-value=8.8e-12 Score=89.46 Aligned_cols=96 Identities=21% Similarity=0.308 Sum_probs=67.0
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eee---------eeccCCcEEEccC-----CcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARS---------IIHSGGRYSITTA-----GALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~---------~~~~~~r~~v~~~-----G~L~I 71 (114)
..+|....|.+|.+|.|.|.+.+.+.+...+.|+|++ ..+ ++. .....+||.+..+ +.|.|
T Consensus 6 v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (247)
T 2ghw_B 6 LVQSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQM 85 (247)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EEecCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEE
Confidence 3566778999999999999997653211279999953 111 100 0123579988653 36999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.+|+.+|+| .|+|.|.|.. +....+..+.|.|.++
T Consensus 86 ~~v~~~D~G-~Y~C~~~n~~-~~~~~~~~~~l~V~~~ 120 (247)
T 2ghw_B 86 NSLRAEDTA-VYYCARDRSY-YLDYWGQGTLVTVSSG 120 (247)
T ss_dssp CSCCGGGCE-EEEEEEEETT-EEEEECCCEEEEECSC
T ss_pred CcCCHHHCE-EEEEeeeccC-CccccCCceEEEEecc
Confidence 999999995 9999999962 2333556778988864
No 263
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.30 E-value=2.5e-11 Score=78.69 Aligned_cols=90 Identities=16% Similarity=0.268 Sum_probs=63.7
Q ss_pred ccceeEEEeCCeEEEEee-cCCCCCCcceEEEeeCCeeeeeee-------eccCCcEEEc--cC---CcEEEeecCCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCN-IPAYNHNLLLIAWLREGVSEARSI-------IHSGGRYSIT--TA---GALHIRDTGMEDS 79 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~-~~~~~~~~~~vsW~kd~~~~~~~~-------~~~~~r~~v~--~~---G~L~I~~v~~~D~ 79 (114)
+|+...+.+|.+|.|.|. +.+.... ..+.|+|.+....... ....+||.+. ++ ..|.|++++.+|+
T Consensus 6 qp~~~~v~~G~~v~L~C~v~~~~~~~-~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 84 (109)
T 1pew_A 6 QPHSVSESPGKTVTISCTRSSGNIAS-NYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDE 84 (109)
T ss_dssp CCSEEEECTTSCEEEEEEESSSCGGG-SCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CCCCEEEcCCCCEEEEEEeCCCCCCC-ccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhC
Confidence 478889999999999999 7544311 2789999873211100 0125799886 32 3699999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
| .|.|.+.+. +...-...++|.|.
T Consensus 85 G-~Y~C~~~~~--~~~~fg~GT~l~V~ 108 (109)
T 1pew_A 85 A-DYYCQSYDA--RNVVFGGGTRLTVL 108 (109)
T ss_dssp E-EEEEEEEET--TEEEECCCEEEEEC
T ss_pred E-EEEEEEEeC--CceEECCCEEEEEe
Confidence 5 999999984 34455668888885
No 264
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.30 E-value=8.7e-12 Score=81.00 Aligned_cols=93 Identities=17% Similarity=0.239 Sum_probs=63.7
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCC--CcceEEEeeCC--ee---eeeee----eccCCcEEEccCC---cEEEeecCC
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNH--NLLLIAWLREG--VS---EARSI----IHSGGRYSITTAG---ALHIRDTGM 76 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~--~~~~vsW~kd~--~~---~~~~~----~~~~~r~~v~~~G---~L~I~~v~~ 76 (114)
...|.+..+.+|.+|.|.|.+.+... ....+.|+|.. .. ++... ....+||.+..++ .|.|++++.
T Consensus 5 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 84 (111)
T 1j05_L 5 TQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEA 84 (111)
T ss_dssp EEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred EEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCc
Confidence 44578889999999999999865431 11278999963 21 11100 0125799886433 799999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+|+| .|.|.+.|. +...-...++|.|+
T Consensus 85 ~DsG-~Y~C~~~~~--~~~~fg~gT~l~V~ 111 (111)
T 1j05_L 85 DDVA-TYYCQQTNE--DPYTFGGGTKLEIK 111 (111)
T ss_dssp GGCE-EEEEEECSS--SSCEECCCEEEEC-
T ss_pred ccCE-EEEEEEecC--CCCEECCCEEEEEC
Confidence 9995 999999985 23345667787764
No 265
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.30 E-value=4.5e-12 Score=91.79 Aligned_cols=101 Identities=13% Similarity=0.200 Sum_probs=70.4
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCc--ceEEEeeCC--eeee---ee----eeccCCcEEEccCC---cEEEee
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNL--LLIAWLREG--VSEA---RS----IIHSGGRYSITTAG---ALHIRD 73 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~--~~vsW~kd~--~~~~---~~----~~~~~~r~~v~~~G---~L~I~~ 73 (114)
+.+...|.+..+.+|.+|.|.|.+.+.+.+. ..+.|+|++ ..+. .. .....+||.+..++ .|.|.+
T Consensus 134 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 213 (253)
T 3uzq_A 134 LVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINP 213 (253)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred ceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECC
Confidence 4566778889999999999999997644320 168999952 2211 00 00124788876543 599999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
++.+|+| .|.|.|.|.. ....+..++|.|++...+
T Consensus 214 v~~~DsG-~Y~C~~~n~~--~~~fg~gt~l~v~~~~~~ 248 (253)
T 3uzq_A 214 VEADDVA-TYFCQRSNEV--PWTFGGGTKLEIKRPLEH 248 (253)
T ss_dssp CCGGGCE-EEEEEECSSS--SCCBCCCEEEEECCC---
T ss_pred CCHHHCE-EEEEEEccCC--CcEECCCEEEEEcCCCCC
Confidence 9999995 9999999963 334677999999987654
No 266
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=99.30 E-value=9.7e-12 Score=82.08 Aligned_cols=96 Identities=20% Similarity=0.295 Sum_probs=66.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCC-Ccc-eEEEeeCC----eeeeeeeeccCCcEEEccC--------CcEEEeecC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNH-NLL-LIAWLREG----VSEARSIIHSGGRYSITTA--------GALHIRDTG 75 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~-~~~-~vsW~kd~----~~~~~~~~~~~~r~~v~~~--------G~L~I~~v~ 75 (114)
+..+|+...+.+|.+|.|.|.+.+... ... .+.|+|.. ..+........+||.+..+ ..|.|++++
T Consensus 10 ~v~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~ 89 (120)
T 3noi_A 10 WVSQPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVR 89 (120)
T ss_dssp CEECCSEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCC
T ss_pred EEcCCCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCC
Confidence 456788889999999999999854321 112 79999975 2211001223579887532 379999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.+|+| .|.|.+...-. ...-...++|.|+.
T Consensus 90 ~~DsG-~Y~C~v~~~~~-~~~fg~GT~l~V~~ 119 (120)
T 3noi_A 90 GHDAS-IYVCRVEVLGL-GVGTGNGTRLVVEK 119 (120)
T ss_dssp GGGCE-EEEEEEEETTT-EEEECCCEEEEEEC
T ss_pred hhhCE-EEEEEEEECCc-cceeCCCeEEEEec
Confidence 99995 99999986422 23456688898875
No 267
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.30 E-value=9.3e-12 Score=87.69 Aligned_cols=91 Identities=15% Similarity=0.224 Sum_probs=63.2
Q ss_pred ccceeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCe--eeeeee-------eccCCcEEEccCC---cEEEeecCCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGV--SEARSI-------IHSGGRYSITTAG---ALHIRDTGMEDS 79 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~--~~~~~~-------~~~~~r~~v~~~G---~L~I~~v~~~D~ 79 (114)
+|++..+.+|++|.|.|.+ .+.. +...+.|+|++. .+.... ....+||.+..++ .|.|.+++.+|+
T Consensus 6 qp~~~~v~~G~~v~L~C~v~~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 84 (216)
T 2xzc_L 6 QPPSVSAAPGQKVTISCSGSSSNI-GNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDE 84 (216)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTG-GGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred CCCcEEecCCCeEEEEEEeecCCC-CCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccC
Confidence 3788999999999999995 3321 112899999642 110000 1125699887544 799999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|.|+|.|.|..+ ....+..+.|.|.
T Consensus 85 -G~Y~C~~~~~~~-~~~~~~~~~l~V~ 109 (216)
T 2xzc_L 85 -ADYYCGTWDSSL-NPVFGGGTKLEIK 109 (216)
T ss_dssp -EEEEEEEECTTS-CEEEBCCEEEEEC
T ss_pred -EEEEEEEEeCCC-cceECCCEEEEEc
Confidence 599999999754 1234556788886
No 268
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.29 E-value=7.3e-12 Score=88.85 Aligned_cols=94 Identities=16% Similarity=0.187 Sum_probs=64.8
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eee----eeccCCcEEEcc---CCcEEEeecCCCCC
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARS----IIHSGGRYSITT---AGALHIRDTGMEDS 79 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~----~~~~~~r~~v~~---~G~L~I~~v~~~D~ 79 (114)
.+|++..+.+|++|.|.|.+.+...++..+.|+|++ ..+ ++. .....+||.+.. ++.|.|.+++.+|+
T Consensus 24 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 103 (234)
T 2j6e_L 24 TQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDE 103 (234)
T ss_dssp BCCSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTC
T ss_pred eCCCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHC
Confidence 348888999999999999986543221158999974 211 100 011247898764 34899999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
| .|+|.|.|..+.....+..++|.|.
T Consensus 104 G-~Y~C~~~~~~~~~~~~~~~~~l~V~ 129 (234)
T 2j6e_L 104 A-DYYCATWDDSLSAVIFGGGTKLTVL 129 (234)
T ss_dssp S-EEEEEEEETTTTEEEECCCBCCCBC
T ss_pred E-EEEEEEEcCCcceeEecCCEEEEEe
Confidence 5 9999999986532334556677773
No 269
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.29 E-value=1.9e-11 Score=89.38 Aligned_cols=98 Identities=18% Similarity=0.170 Sum_probs=69.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCc---ceEEEee--CCeeeeeee-------eccCCcEEEcc---CCcEEEeec
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNL---LLIAWLR--EGVSEARSI-------IHSGGRYSITT---AGALHIRDT 74 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~---~~vsW~k--d~~~~~~~~-------~~~~~r~~v~~---~G~L~I~~v 74 (114)
+...|.+..+.+|.+|.|.|.+.+.+.+. ..+.|+| ++..+.... ....+||.+.. .+.|.|.++
T Consensus 124 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 203 (256)
T 1nqb_A 124 LTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 203 (256)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCC
Confidence 45567888899999999999997654330 2689999 555331100 01257888753 347999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
+.+|+| .|+|.|.|. +....+..++|.|.++..
T Consensus 204 ~~~DsG-~Y~C~a~~~--~~~~fg~gt~l~V~~~~~ 236 (256)
T 1nqb_A 204 EAEDLG-VYYCFQGSH--VPYTFGGGTKLEIKRAAA 236 (256)
T ss_dssp CGGGCE-EEEEEECSS--SSCEECCCEEEEECC---
T ss_pred ChHHCE-EEEEEEccC--CceEECCCEEEEEECCCC
Confidence 999995 999999985 334567789999986654
No 270
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.29 E-value=6.3e-12 Score=94.93 Aligned_cols=92 Identities=17% Similarity=0.283 Sum_probs=67.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCeeeE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~Y~ 84 (114)
+.|...+....+.+|+++.|.|.+.+.+.+ .++|.||+..+ ......|+.+..+| .|.|.+++.+|+| .|+
T Consensus 101 P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~i~W~~~g~~l---~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~ 174 (389)
T 2jll_A 101 PKFISNQTIYYSWEGNPINISCDVKSNPPA--SIHWRRDKLVL---PAKNTTNLKTYSTGRKMILEIAPTSDNDFG-RYN 174 (389)
T ss_dssp EEECCSCCEEEECTTCCEEEEECEEEESCC--EEEEEETTEES---SCTTCTTEEEEECSSCEEEEECCCSTTSSE-EEE
T ss_pred CEEecCcceEEeccCCEEEEEEEEEecCCC--eEEEEECCccC---CcccCceEEEeccCCEEEEEECCCChhhCE-EEE
Confidence 345555555678999999999999776443 89999999864 22233577776544 5999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|.|.|..+. .+..+.|.|.++
T Consensus 175 C~a~N~~G~---~~~~~~l~v~~~ 195 (389)
T 2jll_A 175 CTATNHIGT---RFQEYILALADV 195 (389)
T ss_dssp EEEEETTEE---EEEEEEEEECCC
T ss_pred EEEEcCCCc---EEEEEEEEecCC
Confidence 999998764 333456665443
No 271
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.29 E-value=1.4e-11 Score=80.26 Aligned_cols=92 Identities=13% Similarity=0.148 Sum_probs=64.8
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeeee----eccCCcEEEcc---CCcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARSI----IHSGGRYSITT---AGALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~~----~~~~~r~~v~~---~G~L~I~~v~~~ 77 (114)
....|.+..+.+|.+|.|.|.+.+...+ .+.|+|... .++... ....+||.+.. +..|.|++++.+
T Consensus 7 v~q~p~~~~~~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 84 (111)
T 1i3g_L 7 LTQSHKFMSTSVGDRVSITCKASQDVGT--AVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSE 84 (111)
T ss_dssp EEESCSEEECCTTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEEeCCEEEEcCCCCEEEEEEeCCCCCC--CEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHH
Confidence 4456788899999999999998654322 799998642 122100 01257998863 236999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+| .|.|.+.+. ....-...++|.|+
T Consensus 85 DsG-~Y~C~~~~~--~~~~fg~GT~l~V~ 110 (111)
T 1i3g_L 85 DLA-DYFCQQYSS--YPLTFGAGTKLELK 110 (111)
T ss_dssp GCS-EEEEEECSS--SSCEECCCEEEEC-
T ss_pred HCE-EEEEEEecC--CceEECCCeEEEEe
Confidence 996 999999986 23345667788775
No 272
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.29 E-value=4e-12 Score=100.06 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=64.4
Q ss_pred ccceeEEEeCCeEEEEeecCC-CCCCcceEEEeeCCeeeeee-----eeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPA-YNHNLLLIAWLREGVSEARS-----IIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~-~~~~~~~vsW~kd~~~~~~~-----~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
.+.+..+.+|+++.|.|.+.+ .+.+ .++|+|++..+... ....+.|+ ...++.|.|.+|+.+|+| .|+|.
T Consensus 233 ~~~~~~v~~G~~v~L~C~~~g~~p~p--~i~W~k~g~~l~~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G-~Y~C~ 308 (423)
T 3qs7_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGF--GLTWELENKALEEGNYFEMSTYSTNRT-MIRILFAFVSSVARNDTG-YYTCS 308 (423)
T ss_dssp STTEEEEETTSCEEEEEEEEESSSCC--CEEEEESSSBCCGGGEEEEEEEETTTE-EEEEEEEEESSCCTTTCE-EEEEE
T ss_pred CCCceEEeCCCeEEEEEEEEcCCCCc--EEEEEECCEEccccceeecccccCCce-eEEEEEEEEeecCHHHCE-EEEEE
Confidence 566888999999999999976 2223 79999999864210 00112222 333578999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEeccccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|.|. .+..+.|.|.+++.+
T Consensus 309 A~N~------~~~~~~L~V~~~p~i 327 (423)
T 3qs7_E 309 SSKH------PSQSALVTIVEKGFI 327 (423)
T ss_dssp ETTE------EEEEEEEEEESSCEE
T ss_pred EecC------CCceEEEEEEeCCcc
Confidence 9997 356788888876543
No 273
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.29 E-value=1.1e-11 Score=80.86 Aligned_cols=96 Identities=11% Similarity=0.092 Sum_probs=61.4
Q ss_pred ccceeEEEeCCeEEEEeecCCCC-CCcc-eEEEeeCCe----e--eeeee---------eccCCcEEEc-----cCCcEE
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYN-HNLL-LIAWLREGV----S--EARSI---------IHSGGRYSIT-----TAGALH 70 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~-~~~~-~vsW~kd~~----~--~~~~~---------~~~~~r~~v~-----~~G~L~ 70 (114)
.|....+.+|.+|.|.|.+.... .... .+.|.|++. . ++... ..-.+|+.+. .+++|.
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIV 84 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEE
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEE
Confidence 45677899999999999973221 1122 899998653 1 11100 0115788875 257899
Q ss_pred EeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|++++.+|+| .|.|.+.+..+.. ..+...+|.|.+++.
T Consensus 85 I~~v~~~D~G-~Y~C~v~~~~~~~-~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 85 IHNLDYSDNG-TFTCDVKNPPDIV-GKTSQVTLYVFEKVP 122 (124)
T ss_dssp ECSCCGGGCE-EEEEEEEC----C-CEEEEEEEEEEC---
T ss_pred EccCChhhCE-EEEEEEEcCCCCc-CcEeeEEEEEecCCC
Confidence 9999999995 9999999875431 124467888887653
No 274
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.29 E-value=2.1e-11 Score=88.77 Aligned_cols=98 Identities=17% Similarity=0.268 Sum_probs=70.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeee----------eccCCcEEEcc----CCcEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSI----------IHSGGRYSITT----AGALHI 71 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~----------~~~~~r~~v~~----~G~L~I 71 (114)
+.+...|++..+.+|.+|.|.|.+.+. .+ .+.|+|.+ ....... ....+||.+.. ++.|.|
T Consensus 138 ~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 214 (256)
T 3tf7_C 138 AAVTQSPRNKVTVTGENVTLSCRQTNS-HN--YMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTL 214 (256)
T ss_dssp CCEEESCSEEEEETTCCEEECEEECSC-CS--EEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEE
T ss_pred cEEEecCCEEEEeCCCcEEEEEEcCCC-ce--EEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEE
Confidence 356777888899999999999999654 23 79999843 1110000 01246777753 347999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.+++.+|+| .|+|.|.|.. ++..-...++|.|++...
T Consensus 215 ~~v~~~DsG-~Y~C~a~n~~-g~~~fG~gt~l~v~~~~~ 251 (256)
T 3tf7_C 215 ESASPSQTS-LYFCASSDAP-GQLYFGEGSKLTVLELEH 251 (256)
T ss_dssp SSCCGGGCE-EEEEEEEEET-TEEEECCCEEEEEECGGG
T ss_pred CCCCHHHCE-EEEEEecCCC-CccEECCCeEEEEEcccc
Confidence 999999995 9999999975 455567799999997643
No 275
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.29 E-value=1.2e-11 Score=86.58 Aligned_cols=87 Identities=16% Similarity=0.273 Sum_probs=62.1
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeeee-------eccCCcEEEcc---CCcEEEeecCCCCCCe
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSI-------IHSGGRYSITT---AGALHIRDTGMEDSYI 81 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~-------~~~~~r~~v~~---~G~L~I~~v~~~D~gg 81 (114)
|.+..+.+|.+|.|.|.+. +.+ .+.|+|+ +..+.... ....+||.+.. ++.|.|++|+.+|+|
T Consensus 7 ~~~~~v~~G~~v~L~C~~~--~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G- 81 (211)
T 3tv3_L 7 PPSASGSPGQSITISCTGT--SNN--FVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEA- 81 (211)
T ss_dssp CSEEEECTTCEEEEEEECC--CSS--CEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCE-
T ss_pred CceEEEcCCCCEEEEEEEC--CCC--eEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCE-
Confidence 3378899999999999986 222 8999994 22211000 01347888643 447999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|+|.|.|..+. ...+..+.|.|.
T Consensus 82 ~Y~C~~~~~~~~-~~~~~~~~l~V~ 105 (211)
T 3tv3_L 82 VYYCGSLVGNWD-VIFGGGTKLTVL 105 (211)
T ss_dssp EEEEEEEETTTE-EEECCCEEEEEC
T ss_pred EEEEEEecCCCc-eeECCCceEEEe
Confidence 999999997542 245668889988
No 276
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.29 E-value=1e-11 Score=88.05 Aligned_cols=87 Identities=20% Similarity=0.211 Sum_probs=63.8
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCC
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
+....+.+|+++.|.|.+.+.+.+ .+.|+|++..+... ...........++.|.|.+++.+|+| .|+|.|.|..+.
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~--~v~W~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~~~~~~~ 97 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTP--SISWLKNGREFRGE-HRIGGIKLRHQQWSLVMESVVPSDRG-NYTCVVENKFGS 97 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCC--EEEEEETTEECCGG-GSTTCCEEEGGGTEEEECSCCGGGCE-EEEEEEEETTEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCc--eeEEEECCcccCCC-CcccceeeeccceEEEEEeCCcccCE-EEEEEEeecCCc
Confidence 346789999999999999775443 89999999865211 11112233455779999999999995 999999997543
Q ss_pred cEEeCCCeEEEEec
Q psy9140 94 ERKISPPSQVMVSE 107 (114)
Q Consensus 94 ~~~~s~~a~L~V~~ 107 (114)
.+....|.|..
T Consensus 98 ---~~~~~~l~V~~ 108 (241)
T 3grw_A 98 ---IRQTYTLDVLE 108 (241)
T ss_dssp ---EEEEEEEEEEC
T ss_pred ---eEEEEEEEEec
Confidence 34457777765
No 277
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.29 E-value=1.3e-12 Score=105.89 Aligned_cols=85 Identities=7% Similarity=-0.060 Sum_probs=66.4
Q ss_pred eeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCCcE
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTGER 95 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~~~ 95 (114)
+..+.+|.++.|.|.+.+++.+ .++|+||+..+ ..+.++.. .++.|.|.+++.+|+| .|+|.|.|..+.
T Consensus 335 ~~~v~~G~~v~L~C~~~g~P~p--~i~W~k~g~~l-----~~~~~~~~-~~~~L~I~~v~~~D~G-~YtC~A~N~~g~-- 403 (527)
T 3qs9_E 335 DYEIDQYEEFCFSVRFKAYPQI--RCTWTFSRKSF-----PCEQKGLD-NGYSISKFCNHKHQPG-EYIFHAENDDAQ-- 403 (527)
T ss_dssp EECCCTTCCCCEEEEEEEESCC--EEEEEETTEEE-----ECBCCBCS-SSSEEEEECCCTTCCS-CEEEEEEETTEE--
T ss_pred cEEEcCCCeEEEEEEEEecCCC--EEEEEECCEEC-----cCCccccc-CCcEEEEecCCcccCE-EEEEEEEeCCCc--
Confidence 4678899999999999876555 89999999864 33444433 5779999999999996 999999998764
Q ss_pred EeCCCeEEEEecccccc
Q psy9140 96 KISPPSQVMVSEIALPL 112 (114)
Q Consensus 96 ~~s~~a~L~V~~~~~~~ 112 (114)
.+..+.|.|..++.+.
T Consensus 404 -~~~~~~L~V~~~P~i~ 419 (527)
T 3qs9_E 404 -FTKMFTLNIRRKPQVL 419 (527)
T ss_dssp -EEEEEEEC--CCCEEE
T ss_pred -EEEEEEEEEecCCeEE
Confidence 3447899999888764
No 278
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.29 E-value=1.2e-11 Score=98.55 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=67.7
Q ss_pred eccceeEEEeCCeEEEEeecCCCCC-Ccc-eEEEeeCCeeeeeeeecc-CCcEEEcc-C---CcEEEeecCCCCCCeeeE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNH-NLL-LIAWLREGVSEARSIIHS-GGRYSITT-A---GALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~-~~~-~vsW~kd~~~~~~~~~~~-~~r~~v~~-~---G~L~I~~v~~~D~gg~Y~ 84 (114)
..|.+..+.+|.++.|.|.+.+... .+. .++|+||+..+....... ..+|.... + +.|.|.+|+.+|+| .|+
T Consensus 447 ~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~ 525 (585)
T 2ocw_A 447 KVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG-WYW 525 (585)
T ss_pred ccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCe-EEE
Confidence 3478889999999999999863221 222 899999998753211111 12244432 2 48999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|.|.|.++.. .+..++|.|++++
T Consensus 526 C~a~N~~G~~--~~~~~~l~V~~~p 548 (585)
T 2ocw_A 526 CGVKQGHFYG--ETAAVYVAVEERK 548 (585)
T ss_pred EEeEeCCCcc--EEEEEEEEEEeee
Confidence 9999998642 3345899999876
No 279
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.28 E-value=5e-11 Score=80.12 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=68.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Cee---eeeee-----eccCCcEEEc--cC---CcEEEeec
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVS---EARSI-----IHSGGRYSIT--TA---GALHIRDT 74 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~---~~~~~-----~~~~~r~~v~--~~---G~L~I~~v 74 (114)
+...|+...+.+|.+|.|.|........ ..+.|+|. +.. ++... ....+||.+. ++ ..|.|+++
T Consensus 4 ~~Q~P~~~~v~~G~~vtL~C~~s~~~~~-~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 82 (129)
T 3rrq_A 4 PTFSPALLVVTEGDNATFTCSFSNTSES-FVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRA 82 (129)
T ss_dssp CEEECSEEEEETTSCEEEEEECCCCC-C-EEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSC
T ss_pred cEECCCEEEEeCCCCEEEEeEecCCCCC-cEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCC
Confidence 4567889999999999999998654222 27899974 211 21100 0124699886 22 36999999
Q ss_pred CCCCCCeeeEEEEeeccCCc-EEeCCCeEEEEeccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGE-RKISPPSQVMVSEIA 109 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~-~~~s~~a~L~V~~~~ 109 (114)
+.+|+| .|.|.+.|..... ...+..++|.|.+..
T Consensus 83 ~~~Dsg-~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 83 RRNDSG-TYLCGAISLAPKLQIKESLRAELRVTERR 117 (129)
T ss_dssp CGGGCE-EEEEEEEECGGGCEEEECCCEEEEEECCC
T ss_pred ChhHCE-EEEEEEEecCCCceeeEeceEEEEEecCc
Confidence 999995 9999999976543 234678999998653
No 280
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.28 E-value=2.7e-11 Score=88.18 Aligned_cols=95 Identities=21% Similarity=0.342 Sum_probs=65.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeeee-e------cc----CCcEEEcc----CCcEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSI-I------HS----GGRYSITT----AGALH 70 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~-~------~~----~~r~~v~~----~G~L~ 70 (114)
..+...|++..+.+|++|+|.|.+.. +...+.|+|. +....... . .. ++||.+.. ++.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~~---~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPIS---GHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLK 103 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCBT---TCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEE
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeCC---CCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEE
Confidence 34556788889999999999999742 2228999992 22211000 0 01 28999875 56799
Q ss_pred EeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|++|+.+|+| .|+|.+.|.. .....+..+.|.|.+
T Consensus 104 I~~v~~~D~G-~Y~C~~~~~~-~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 104 IQRTERGDSA-VYLCATSALG-DTQYFGPGTRLTVLE 138 (268)
T ss_dssp ECSCCGGGCE-EEEEEEESSS-SSCEECCCEEEEEES
T ss_pred ECCCCcccCE-EEEEEEecCC-CceeeCCcEEEEEec
Confidence 9999999995 9999999842 122345677888875
No 281
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.28 E-value=2e-11 Score=88.21 Aligned_cols=97 Identities=21% Similarity=0.396 Sum_probs=66.0
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeee-ee-----------ccCCcEEEccCCc-----EEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARS-II-----------HSGGRYSITTAGA-----LHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~-~~-----------~~~~r~~v~~~G~-----L~I 71 (114)
...+....+.+|.+|.|.|.+.+...+...+.|+|++ ..+... .. ...+||.+..++. |.|
T Consensus 138 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 217 (256)
T 3ux9_B 138 LVESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQM 217 (256)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EEcCCCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEE
Confidence 3445556799999999999996543212289999973 221100 01 2245998875444 999
Q ss_pred eecCCCCCCeeeEEEEeeccCC-cEEeCCCeEEEEecc
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTG-ERKISPPSQVMVSEI 108 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~~~ 108 (114)
.+++.+|+| .|+|.|.|.-.. .......++|.|+.+
T Consensus 218 ~~v~~~DsG-~Y~C~~~~~~~~~~~~~g~gt~l~V~~~ 254 (256)
T 3ux9_B 218 NSLRAEDTA-VYYCARYIDFGDHMDFWGQGTLVTVSSL 254 (256)
T ss_dssp CSCCGGGCE-EEEEEEEETTTTEEEEECCCEEEEECCC
T ss_pred CCCChhhCE-EEEEEEEcCCCcceEEECCCeEEEEecC
Confidence 999999995 999999995211 223456889999865
No 282
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.28 E-value=8.1e-12 Score=87.77 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=64.1
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEE-ccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSI-TTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v-~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
.+.+.|. ..|.+|+++.|.|.+.+ ..+ .+.|+||+..+.. .....++.. ..++.|.|.+|+.+|+| .|+|.|
T Consensus 10 ~i~~~p~-~~v~~G~~v~L~C~~~~-~~~--~~~w~k~g~~~~~--~~~~~~~~~~~~~~~l~I~~v~~~D~G-~Y~C~a 82 (201)
T 1nkr_A 10 SLLAHPG-PLVKSEETVILQCWSDV-MFE--HFLLHREGMFNDT--LRLIGEHHDGVSKANFSISRMTQDLAG-TYRCYG 82 (201)
T ss_dssp EEEEESC-SEEETTCCEEEEEEESS-CCS--EEEEEEESSSCEE--EEEECEEETTEEEEEEEESSCCGGGCE-EEEEEE
T ss_pred eEEEEcC-CccCCCCcEEEEEeccC-CCC--EEEEEECCCcCCc--ceeeeecCCCCceEEEEeccCCcccCe-EEEEeE
Confidence 3667775 78999999999999853 222 8999999885421 111112221 24688999999999995 999999
Q ss_pred eeccCC--cEEeCCCeEEEEecc
Q psy9140 88 THKLTG--ERKISPPSQVMVSEI 108 (114)
Q Consensus 88 ~n~l~~--~~~~s~~a~L~V~~~ 108 (114)
.|...+ ....|..+.|.|.++
T Consensus 83 ~~~~~~~~~~~~s~~~~l~V~~~ 105 (201)
T 1nkr_A 83 SVTHSPYQVSAPSDPLDIVIIGL 105 (201)
T ss_dssp EBTTBTTCCCCCCCCEEEEEECS
T ss_pred ecCCCCccccCCCCCEEEEeecc
Confidence 875321 112466788888753
No 283
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.28 E-value=2.3e-11 Score=82.39 Aligned_cols=84 Identities=20% Similarity=0.202 Sum_probs=65.2
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+.+.|.+..+.+|+++.|.|.+.+.+.+. .+.|+|++..+ .. ..+.|.|.+++.+|+| .|+|.+
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~-~~~W~~~g~~~-----~~-------~~~~~~~~~~~~~d~G-~Y~C~~ 70 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESD-SIQWFHNGNLI-----PT-------HTQPSYRFKANNNDSG-EYTCQT 70 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEESCCCSSSS-CEEEEETTEEC-----TT-------CCSSEEEEECCGGGCE-EEEEEE
T ss_pred CEEEeCCCCeEEECCCcEEEEEEecCCCCcc-eEEEEECCeEc-----cc-------CccceEEEecccccCe-EEEEEE
Confidence 3467788888999999999999997753222 79999999853 21 1467899999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEecccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.|.. .+...+|.|..+..
T Consensus 71 ~~~~-----~s~~~~l~v~~~~~ 88 (170)
T 3ry4_A 71 GQTS-----LSDPVHLTVLFEWL 88 (170)
T ss_dssp TTSB-----CCCCEEEEEECCSE
T ss_pred eCCC-----ceEeEEEEEECCce
Confidence 9742 35678888886543
No 284
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.28 E-value=5.1e-11 Score=85.26 Aligned_cols=95 Identities=17% Similarity=0.303 Sum_probs=64.9
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee--e-e-------eeeccCCcEEEcc----CCcEEEe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE--A-R-------SIIHSGGRYSITT----AGALHIR 72 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~--~-~-------~~~~~~~r~~v~~----~G~L~I~ 72 (114)
.+...|++..+.+|.+|.|.|.+.+ +...+.|+|.. ... + . ......+||.+.. ++.|.|+
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 80 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS---GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMS 80 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT---TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEEC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC---CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEEC
Confidence 4556788899999999999999853 21289999921 100 0 0 0112247998864 3369999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|+|.+.+........+..+.|.|..
T Consensus 81 ~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~l~V~~ 114 (240)
T 3q5y_A 81 ALELEDSA-MYFCASSLRWGDEQYFGPGTRLTVLE 114 (240)
T ss_dssp SCCGGGCE-EEEEEEESSTTBCCEECCCEEEEEES
T ss_pred cCChhHCE-EEEEEEccCCCcceEEcCCEEEEEec
Confidence 99999995 99999984322233456677888874
No 285
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.28 E-value=1.1e-11 Score=97.63 Aligned_cols=90 Identities=12% Similarity=-0.029 Sum_probs=58.3
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeee-eeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEAR-SIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~-~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
....|.+..|.+|+++.|+|.+.+++.+ .+.|++++..+.. .....+.|+. ..|.|.+|+.+|+| .|+|.|.
T Consensus 51 ~~~~~~~v~V~~G~~v~L~C~v~g~P~p--~i~W~~~~~~l~~~~~~~~~~~~~----~sL~I~~v~~~D~G-~Y~C~a~ 123 (423)
T 3qs7_E 51 TVYEAAAVEVDVSASITLQVLVDAPGNI--SCLWVFKHSSLNCQPHFDLQNRGV----VSMVILKMTETQAG-EYLLFIQ 123 (423)
T ss_dssp -----CEEEECSSCCEEEEEECSCCSSC--EEEEEETTEEECCCCBC-----CE----EEEEESSCCSSSCS-EEEEEEE
T ss_pred ceeccccEEEecCCcEEEEEEEEcCCCC--eEEEEECCCccCccceeccccceE----EEEEEeecCcccCE-EEEEEEE
Confidence 3455668899999999999999875443 8999999875411 0111133332 35999999999996 9999999
Q ss_pred eccCCcEEeCCCeEEEEeccc
Q psy9140 89 HKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 89 n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|..+. .+..+.|.|+.+.
T Consensus 124 N~~g~---~~~~~~l~V~~~p 141 (423)
T 3qs7_E 124 SEATN---YTILFTVSIRNTL 141 (423)
T ss_dssp C--CE---EEEEEEEEEC---
T ss_pred cCCCc---EEEEEEEEEecCc
Confidence 98653 4456788887543
No 286
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.28 E-value=6.7e-12 Score=97.01 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=67.6
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
+...|++..+.+|+++.|.|.+.+.+.++. .++|+||+..+.. +.++....++.|.|.+++.+|+| .|+|.|.
T Consensus 89 ~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~-----~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a~ 162 (450)
T 1z7z_I 89 VELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKR-----EPAVGEPAEVTTTVLVRRDHHGA-NFSCRTE 162 (450)
T ss_dssp EEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEE-----EECCTTTEEEEEEEECCSSCSSC-EEEEEEE
T ss_pred ceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeec-----ccccccccceEEEEEeeccccCc-eEEEEEE
Confidence 447888899999999999999977654432 7899999986521 11222223579999999999995 9999999
Q ss_pred eccCCc-----EEeCCCeEEEEecc
Q psy9140 89 HKLTGE-----RKISPPSQVMVSEI 108 (114)
Q Consensus 89 n~l~~~-----~~~s~~a~L~V~~~ 108 (114)
|..+.. ...+....|.|...
T Consensus 163 n~~g~~~~~~~~~~s~~~~l~v~~~ 187 (450)
T 1z7z_I 163 LDLRPQGLELFENTSAPYQLQTFVL 187 (450)
T ss_dssp EECGGGTSCEEEEECCCEECEECCC
T ss_pred cccCCCCceEEeeccCccceeeecc
Confidence 986532 23345667777643
No 287
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.28 E-value=1.8e-11 Score=87.83 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=67.2
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee------eccCCcEEEcc----CCcEEEe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI------IHSGGRYSITT----AGALHIR 72 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~------~~~~~r~~v~~----~G~L~I~ 72 (114)
+.....|++..+.+|.+|+|.|.+.+...+ .+.|+|.+ ... +... ....+||.+.. +..|.|+
T Consensus 2 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 79 (245)
T 3nfj_J 2 QTIHQWPATLVQPVGSPLSLECTVEGTSNP--NLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSK 79 (245)
T ss_dssp CEEEEECSEEEEETTCCEEEEEEEESCSSC--EEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEES
T ss_pred CeeeCCCceEEecCCCCEEEEEEecCCCCc--eEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEEC
Confidence 456677889999999999999999654332 89999932 211 0000 11247888764 3379999
Q ss_pred ecCCCCCCeeeEEEEeeccC---CcEEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLT---GERKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~---~~~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|.|.+.|..+ .....+..+.|.|..
T Consensus 80 ~v~~~D~G-~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~ 116 (245)
T 3nfj_J 80 KLLLSDSG-FYLCAWSVSVGAGVPTIYFGEGSWLTVVE 116 (245)
T ss_dssp SCCGGGCE-EEEEEEECCTTTSSCCCEECCCEEEEEES
T ss_pred CCChhhCE-EEEEEEeeccCCCceeEEECCCeEEEEEc
Confidence 99999995 99999999321 122345577888875
No 288
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.28 E-value=3.6e-12 Score=93.35 Aligned_cols=85 Identities=14% Similarity=0.264 Sum_probs=66.7
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc---CCcEEEee-cCCCCCCeeeEEEEee
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT---AGALHIRD-TGMEDSYIRYYCQTTH 89 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~---~G~L~I~~-v~~~D~gg~Y~C~a~n 89 (114)
+.+..+.+|..+.|.|.+.+.+.+ .++|+|++..+ ..+.||.+.. .+.|.|.+ ++.+|+| .|+|.|.|
T Consensus 111 ~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~-----~~~~~~~~~~~~~~~~l~i~~~~~~~d~G-~Y~C~a~N 182 (305)
T 2nzi_A 111 MGAVHALRGEVVSIKIPFSGKPDP--VITWQKGQDLI-----DNNGHYQVIVTRSFTSLVFPNGVERKDAG-FYVVCAKN 182 (305)
T ss_dssp SCCEEEETTCCEEEEEEEEEESCC--EEEEEESSSBC-----CSSSSCEEEECSSEEEEEETTCCCSTTCE-EEEEEEEE
T ss_pred cccEEecCCCEEEEEEEECCCCCC--EEEEEECCEEC-----CCCCcEEEEEcCCceEEEEecCCccCccE-EEEEEEEe
Confidence 356788999999999999776444 89999998853 4567887753 46899999 9999995 99999999
Q ss_pred ccCCcEEeCCCeEEEEeccc
Q psy9140 90 KLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~~~~ 109 (114)
..+. .+..+.|.|.+++
T Consensus 183 ~~G~---~~~~~~l~v~~~P 199 (305)
T 2nzi_A 183 RFGI---DQKTVELDVADVP 199 (305)
T ss_dssp TTEE---EEEEEEEEEEBCC
T ss_pred CCCc---eeeEEEEEEecCC
Confidence 8764 3446777777544
No 289
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.28 E-value=7.5e-12 Score=102.93 Aligned_cols=90 Identities=16% Similarity=0.211 Sum_probs=74.9
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC---cEEEeecCCCCCCee
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDSYIR 82 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~gg~ 82 (114)
..+.|...+.+..+.+|++|.|.|.+.+.+.| .|.|+|++..| ..+.||.+..+| .|.|.++..+|+| .
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P--~v~W~k~~~el-----~~s~~~~i~~~~~~~~L~I~~~~~~D~G-~ 552 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPP--VVTWHKDDREL-----KQSVKYMKRYNGNDYGLTINRVKGDDKG-E 552 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCC--EEEEEETTEEC-----CSSSSEEEEEETTEEEEEECSCCGGGCE-E
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCC--eEEEEECCEEc-----ccCCcEEEEEcCCEEEEEEcCCCcccCc-E
Confidence 34668889999999999999999999876655 89999999854 567899886544 5999999999995 9
Q ss_pred eEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 83 YYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 83 Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|+|+|.|.+|. .+..++|.|+
T Consensus 553 Yt~~A~N~~G~---~~~~v~l~Vt 573 (573)
T 3uto_A 553 YTVRAKNSYGT---KEEIVFLNVT 573 (573)
T ss_dssp EEEEEEETTEE---EEEEEEEEEC
T ss_pred EEEEEEeCCCc---EEEEEEEEEC
Confidence 99999999864 4667777774
No 290
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.28 E-value=3.8e-12 Score=90.29 Aligned_cols=89 Identities=17% Similarity=0.249 Sum_probs=62.0
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEee----CCeeeeeeeeccCCcEEE----------ccCCcEEEeecCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR----EGVSEARSIIHSGGRYSI----------TTAGALHIRDTGMED 78 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k----d~~~~~~~~~~~~~r~~v----------~~~G~L~I~~v~~~D 78 (114)
.+.+..+.+|.++.|.|.+.+.+.+ .+.|+| ++..+ ...+.++.. ..++.|.|.+++.+|
T Consensus 120 ~~~~~~~~~g~~v~L~C~~~~~p~p--~v~W~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 193 (241)
T 3grw_A 120 LPANQTAVLGSDVEFHCKVYSDAQP--HIQWLKHVEVNGSKV----GPDGTPYVTVLKSWISESVEADVRLRLANVSERD 193 (241)
T ss_dssp TTCSEECCTTCCEEEEEEEECSSCC--EEEEEEECCSSSCSS----CTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGG
T ss_pred CCccceecCCCEEEEEEEEecCCCC--EEEEEEcccCCCccc----CCCCceeeeeeeEeeeeecCCceEEEECcCCccc
Confidence 4667788999999999999776544 899999 66643 112222221 135679999999999
Q ss_pred CCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 79 SYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+| .|+|.|.|..+. .+....|.|++++.+
T Consensus 194 ~G-~Y~C~a~N~~g~---~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 194 GG-EYLCRATNFIGV---AEKAFWLSVHGPRAA 222 (241)
T ss_dssp CE-EEEEEEECSSCE---EEEEEEEEC------
T ss_pred Cc-EEEEEEecCcce---EEEEEEEEecCCCCC
Confidence 95 999999998764 355789999877654
No 291
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.27 E-value=9.1e-12 Score=93.15 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=68.5
Q ss_pred cceeec-cceeEEEeCCeEEEEeecCCCCC---------CcceEEEeeCCeeeeee-ee---ccCCcEEEccCCcEEEee
Q psy9140 8 SDYEIN-TGNTFVLRGNIAVLQCNIPAYNH---------NLLLIAWLREGVSEARS-II---HSGGRYSITTAGALHIRD 73 (114)
Q Consensus 8 ~~~~v~-~~d~~v~~G~~AvL~C~~~~~~~---------~~~~vsW~kd~~~~~~~-~~---~~~~r~~v~~~G~L~I~~ 73 (114)
+.|.++ .++..|.+|+++.|.|.+.+.+. +...+.|+|++...... .. ..+.|+... ++.|.|.+
T Consensus 7 ~~~~~~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~-~~~L~i~~ 85 (349)
T 4dep_C 7 DDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKE-KDVLWFRP 85 (349)
T ss_dssp EEEEECCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEE-TTEEEESS
T ss_pred cccccceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeec-CCEEEEcc
Confidence 345555 45667999999999999976532 11289999998421100 11 235566554 78999999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
++.+|+| .|+|.|.|..+. .+..+.|.|.++..
T Consensus 86 ~~~~D~G-~Y~C~a~n~~~~---~~~~~~l~V~~~~~ 118 (349)
T 4dep_C 86 TLLNDTG-NYTCMLRNTTYC---SKVAFPLEVVQKDS 118 (349)
T ss_dssp CCGGGCE-EEEEEEECSSCE---EEEEEEEEEECCCT
T ss_pred CChhhCE-EEEEEEecCCce---EEEEEEEEEecCCc
Confidence 9999995 999999997542 34467888886544
No 292
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.27 E-value=1.4e-11 Score=89.25 Aligned_cols=97 Identities=20% Similarity=0.194 Sum_probs=65.7
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee--e-ee--------eeccCCcEEEccCC-----cEEEe
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE--A-RS--------IIHSGGRYSITTAG-----ALHIR 72 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~--~-~~--------~~~~~~r~~v~~~G-----~L~I~ 72 (114)
...|.+..|.+|++|+|.|.+.+...+...+.|+|.. ... + .. .....+||.+..++ .|.|+
T Consensus 12 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 91 (257)
T 3gkz_A 12 LQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLK 91 (257)
T ss_dssp EEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred EECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEEC
Confidence 3567788899999999999986532222289999943 111 1 00 01234799887543 59999
Q ss_pred ecCCCCCCeeeEEEEeeccCC-cEEeCCCeEEEEecc
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTG-ERKISPPSQVMVSEI 108 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~~~ 108 (114)
+|+.+|+| .|+|.|.|..+. ....+..+.|.|.++
T Consensus 92 ~v~~~DsG-~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 92 SVSSEDTA-TYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp SCCGGGCE-EEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred CCChhhCE-EEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 99999995 999999996211 233466788999876
No 293
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.27 E-value=2.2e-11 Score=86.03 Aligned_cols=94 Identities=22% Similarity=0.398 Sum_probs=64.8
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee--e-ee--------eeccCCcEEEccCCc---EEEeecC
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE--A-RS--------IIHSGGRYSITTAGA---LHIRDTG 75 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~--~-~~--------~~~~~~r~~v~~~G~---L~I~~v~ 75 (114)
..|++..|.+|++|.|.|.+.++..+...+.|+|.. ... + .. .....+||.+..++. |.|++++
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPT 83 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCC
Confidence 467788999999999999985432222279998743 111 1 00 012357998876554 9999999
Q ss_pred CCCCCeeeEEEEeeccCC-cEEeCCCeEEEEe
Q psy9140 76 MEDSYIRYYCQTTHKLTG-ERKISPPSQVMVS 106 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~ 106 (114)
.+|+| .|.|.+.|..+. ....+..+.|.|.
T Consensus 84 ~~D~G-~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 84 TEDTA-TYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp GGGCE-EEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred cccCE-EEEEEEecCCCccceEEcCCEEEEEe
Confidence 99995 999999987431 1224557788886
No 294
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.27 E-value=5.8e-13 Score=98.12 Aligned_cols=91 Identities=15% Similarity=0.177 Sum_probs=64.3
Q ss_pred cceeecccee-EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 8 SDYEINTGNT-FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 8 ~~~~v~~~d~-~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
+.+.+.+.+. .+.+|.++.|.|.+.+.++| ..+.|+|++..+ . ++ .....+..|.|.+++.+|+| .|+|.
T Consensus 212 P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p-~~v~W~k~~~~~-----~-~~-~~~~~~~~l~i~~v~~~d~G-~Y~C~ 282 (308)
T 4fom_A 212 PEVSVTGYDGNWFVGRKGVNLKCNADANPPP-FKSVWSRLDGQW-----P-DG-LLASDNTLHFVHPLTFNYSG-VYICK 282 (308)
T ss_dssp EEECCBCCCSCEETTCCSCEEECCEEEESCE-EEEECCBSSSCC-----C-SS-CBCSTTEEECCSCCCSCCCS-EEEEE
T ss_pred CeeEEcccceeeeeccccEEEEEEEecCCCC-cEEEEEECCeEC-----C-Cc-EEEcCCeEEEECCCChhhCE-EEEEE
Confidence 3345555444 56678899999999775433 168999998854 1 11 22222345678999999996 99999
Q ss_pred EeeccCCcEEeCCCeEEEEecccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.|.++. .+..+.|.|++|+-
T Consensus 283 A~N~~G~---~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 283 VTNSLGQ---RSDQKVIYISDPPH 303 (308)
T ss_dssp EEETTEE---EEEEEECCEECCC-
T ss_pred EEeCCCc---EEEEEEEEEEcCCC
Confidence 9999864 46688999998864
No 295
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.93 E-value=3.7e-13 Score=87.73 Aligned_cols=93 Identities=19% Similarity=0.354 Sum_probs=64.0
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--e---eeeee----eccCCcEEEcc-----CCcEEEeecCC
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--S---EARSI----IHSGGRYSITT-----AGALHIRDTGM 76 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~---~~~~~----~~~~~r~~v~~-----~G~L~I~~v~~ 76 (114)
+..|++..+.+|.+|.|.|.+.+...+ .+.|+|.+. . ++... ...++||.+.. +..|.|++++.
T Consensus 3 ~Q~p~~v~v~~G~~v~L~C~~~~~~~~--~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 80 (110)
T 1u3h_A 3 RQSPQSLTVWEGETAILNCSYENSAFD--YFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP 80 (110)
Confidence 345888899999999999998554222 789999642 1 11100 12467998853 35899999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+|+| .|.|.+.|..+....-...++|.|.
T Consensus 81 ~DsG-~Y~C~~~~~~~~~~~fg~gT~l~V~ 109 (110)
T 1u3h_A 81 GDSA-TYFCAASANSGTYQRFGTGTKLQVV 109 (110)
Confidence 9995 9999999853222233446666654
No 296
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.27 E-value=2.3e-11 Score=89.52 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=69.4
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCC----cceEEEeeCC--eee---eeee----eccCCcEEEccC---CcEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHN----LLLIAWLREG--VSE---ARSI----IHSGGRYSITTA---GALHI 71 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~----~~~vsW~kd~--~~~---~~~~----~~~~~r~~v~~~---G~L~I 71 (114)
..+...|.+..+.+|.+|.|.|.+.+.+.. ...+.|+|++ ..+ ++.. ...++||.+..+ +.|.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 346678899999999999999998654310 1289999953 211 1100 012579988643 48999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.+|+.+|+| .|.|.+.|... ...+..+.|.|..+
T Consensus 86 ~~v~~~DsG-~Y~C~~~~~~~--~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 86 GSVKAEDLA-VYYCQQYSNYP--WTFGGGTRLEIKRG 119 (264)
T ss_dssp SSCCGGGCE-EEEEEECSSSS--CEECCCEEEEEECC
T ss_pred CCCCHHHCE-EEEEEEecCCc--cEecCCEEEEEEcC
Confidence 999999995 99999998642 23455778999876
No 297
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.27 E-value=1.8e-11 Score=98.79 Aligned_cols=80 Identities=16% Similarity=0.239 Sum_probs=66.3
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
.+.+.|.+..+.+|..+.|.|.+.+++.+ .++|+||+..+ . .++.|.|.+++.+|+| .|+|.|.
T Consensus 561 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p--~v~W~~~g~~i-----~--------~~~~L~i~~~~~~d~G-~Y~C~a~ 624 (642)
T 1e07_A 561 TPIISPPDSSYLSGANLNLSCHSASNPSP--QYSWRINGIPQ-----Q--------HTQVLFIAKITPNNNG-TYACFVS 624 (642)
T ss_pred cceecCCceeEEcCCcEEEEEEeccCCCC--eEEEEECCEEC-----c--------cCceEEECcccccCCe-EEEEEEE
Confidence 47788899999999999999999876544 89999998853 1 2468999999999995 9999999
Q ss_pred eccCCcEEeCCCeEEEEec
Q psy9140 89 HKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 89 n~l~~~~~~s~~a~L~V~~ 107 (114)
|.++. .+..+.|.|+.
T Consensus 625 N~~G~---~~~s~~l~V~v 640 (642)
T 1e07_A 625 NLATG---RNNSIVKSITV 640 (642)
T ss_pred ecccC---cceeEEEEEEE
Confidence 99876 45677787764
No 298
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=2.2e-12 Score=97.83 Aligned_cols=81 Identities=9% Similarity=0.077 Sum_probs=61.4
Q ss_pred EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEE--E--------ccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 18 FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYS--I--------TTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 18 ~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~--v--------~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
.+.+|.++.|.|.+.+++.+ .++|.|++..+ ..+.+.. + ..+|.|.|.+++.+|+| .|+|.|
T Consensus 257 ~~~~g~~v~l~C~~~g~P~p--~i~W~~~g~~l-----~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G-~Y~C~a 328 (347)
T 2ifg_A 257 TAVEMHHWCIPFSVDGQPAP--SLRWLFNGSVL-----NETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNG-NYTLLA 328 (347)
T ss_dssp CCEESSSEEEEEEEEEESCC--EEEEEETTEEC-----CCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCE-EEEEEE
T ss_pred cCccCceEEEEEEeeecCCC--cEEEEeCCEEC-----CCCcceeeEEEeecCCCcccceEEEECCCCcccCc-eEEEEE
Confidence 45689999999999887555 89999999864 2222222 1 12677999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEeccc
Q psy9140 88 THKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.|.++. .+..+.|.|.+++
T Consensus 329 ~N~~G~---~~~~~~l~V~~~P 347 (347)
T 2ifg_A 329 ANPFGQ---ASASIMAAFMDNP 347 (347)
T ss_dssp EETTEE---EEEEEEECSCCCC
T ss_pred ecCCCc---eeeEEEEEecCCC
Confidence 999764 4567788877653
No 299
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.27 E-value=7.6e-12 Score=98.81 Aligned_cols=100 Identities=13% Similarity=0.272 Sum_probs=72.0
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeee--eeee-eccCCcEEEccCCcEEEeecCCCCCCeee
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSE--ARSI-IHSGGRYSITTAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~--~~~~-~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y 83 (114)
.+.|...|.+..+.+|+++.|.|.+.+.+.+. .++|+|++..+ .... ....+++....++.|.|.+++.+|+| .|
T Consensus 211 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~Y 288 (524)
T 2ec8_A 211 VPVVSVSKASYLLREGEEFTVTCTIKDVSSSV-YSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSG-VF 288 (524)
T ss_dssp CCEEECSCSEEEEETTSCEEEEEEEEESSTTC-EEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCE-EE
T ss_pred CCcEEecCCcceEEcCCcEEEEEEEecCCCcE-EEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCE-EE
Confidence 35688889999999999999999997654331 59999999862 1100 01111112334689999999999995 99
Q ss_pred EEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+|.|.|..+. .+..+.|.|.+++.+
T Consensus 289 ~C~a~n~~g~---~~~~~~l~V~~~p~~ 313 (524)
T 2ec8_A 289 MCYANNTFGS---ANVTTTLEVVDKGFI 313 (524)
T ss_dssp EEEEECSSCE---EEEEEEEEEESSCEE
T ss_pred EEEEEecCCc---eEEEEEEEEeccCce
Confidence 9999998654 344788999877654
No 300
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.27 E-value=6.4e-11 Score=85.99 Aligned_cols=93 Identities=19% Similarity=0.278 Sum_probs=64.2
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee-------eccCC-cEEEccCCc--EEEeecCC
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI-------IHSGG-RYSITTAGA--LHIRDTGM 76 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~-------~~~~~-r~~v~~~G~--L~I~~v~~ 76 (114)
..|+...+.+|.+|.|.|.+++...+ .+.|+|.. .. ++... ....+ ||.+..++. |.|++|+.
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~~--~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~ 83 (253)
T 3to4_D 6 QNPRWRLVPRGQAVNLRCILKNSQYP--WMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANM 83 (253)
T ss_dssp EECSEEEEESSCCEEEEEECSCTTCC--CEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESC
T ss_pred eCCCeEEEeCCCcEEEEEEeCCCCcc--eEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCCh
Confidence 45778899999999999998654333 78998831 11 11000 00123 999876555 99999999
Q ss_pred CCCCeeeEEEEeeccC---CcEEeCCCeEEEEec
Q psy9140 77 EDSYIRYYCQTTHKLT---GERKISPPSQVMVSE 107 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~---~~~~~s~~a~L~V~~ 107 (114)
+|+| .|.|.+.+..+ .....+..+.|.|..
T Consensus 84 ~DsG-~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~ 116 (253)
T 3to4_D 84 SQGR-TLYCTSSADHWTNTGQLYFGEGSKLTVLE 116 (253)
T ss_dssp SSCE-EEEEEEECSCCSTTCCEEECCCEEEEEES
T ss_pred hhCe-EEEEEEecCCCCcccceEECCCEEEEEec
Confidence 9995 99999997643 233445677888863
No 301
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.27 E-value=4.8e-12 Score=90.05 Aligned_cols=96 Identities=20% Similarity=0.254 Sum_probs=65.9
Q ss_pred eccceeEEEeCCeEEEEeecCCCC-CCcceEEEeeCCeee----eee---------------------eeccCCcEEEcc
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYN-HNLLLIAWLREGVSE----ARS---------------------IIHSGGRYSITT 65 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~-~~~~~vsW~kd~~~~----~~~---------------------~~~~~~r~~v~~ 65 (114)
..+++..|.+|++|.|.|.+.+.. .+.+.+.|+|++... ++. .....+|+.+..
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 445578899999999999985411 122289999997532 111 012357887765
Q ss_pred --CCcEEEeecCCCCCCeeeEEEEeeccCCcE--EeCCCeEEEEecc
Q psy9140 66 --AGALHIRDTGMEDSYIRYYCQTTHKLTGER--KISPPSQVMVSEI 108 (114)
Q Consensus 66 --~G~L~I~~v~~~D~gg~Y~C~a~n~l~~~~--~~s~~a~L~V~~~ 108 (114)
++.|.|.+|+.+|+| .|+|.|.|...... ..+....|.|..+
T Consensus 87 ~~~~~L~I~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGG-RYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp TTSCCEEECSCCGGGCE-EEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred CCcceEEEeeCChhhCe-EEEEEeccCccCCcccccceeEEEEEecc
Confidence 468999999999995 99999999754310 1133677888764
No 302
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=99.27 E-value=3e-11 Score=80.50 Aligned_cols=100 Identities=19% Similarity=0.304 Sum_probs=66.1
Q ss_pred ccee-eccceeEEEeCCeEEEEeecCCC-----CCCcceEEEeeCCee-----eeeee-------eccCCcEEEccC---
Q psy9140 8 SDYE-INTGNTFVLRGNIAVLQCNIPAY-----NHNLLLIAWLREGVS-----EARSI-------IHSGGRYSITTA--- 66 (114)
Q Consensus 8 ~~~~-v~~~d~~v~~G~~AvL~C~~~~~-----~~~~~~vsW~kd~~~-----~~~~~-------~~~~~r~~v~~~--- 66 (114)
+.|. ..|+...+.+|.+|.|.|.+... ......+.|+|.... ++... ....+||.+..+
T Consensus 6 ~~~~~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~ 85 (132)
T 1nko_A 6 KDYSLTMQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQT 85 (132)
T ss_dssp GGCEEEECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGG
T ss_pred CCeEEeCCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCC
Confidence 4454 45888899999999999998421 111128999997642 22111 112489998642
Q ss_pred --CcEEEeecCCCCCCeeeEEEEeeccCCcEEe-CCCeEEEEeccc
Q psy9140 67 --GALHIRDTGMEDSYIRYYCQTTHKLTGERKI-SPPSQVMVSEIA 109 (114)
Q Consensus 67 --G~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~-s~~a~L~V~~~~ 109 (114)
.+|.|++|+.+|+| .|.|.+.+.-. .... ....+|.|.+++
T Consensus 86 ~~~sL~I~~v~~~DsG-~Y~C~v~~~~~-~~~~~~~~~~l~V~~~~ 129 (132)
T 1nko_A 86 KNCTLSIRDARMSDAG-RYFFRMEKGNI-KWNYKYDQLSVNVTALT 129 (132)
T ss_dssp TBCCEEECSCCGGGCE-EEEEEEEETTE-EEECTTSCEEEEEECCC
T ss_pred CceEEEEcccCcccCe-eEEEEEEcCCC-cccccCCceEEEecccC
Confidence 37999999999995 99999998521 1112 347888888765
No 303
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.26 E-value=2.1e-11 Score=81.32 Aligned_cols=97 Identities=15% Similarity=0.191 Sum_probs=67.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCC--CcceEEEeeCC--e---eeeeee----eccCCcEEEccC---CcEEEeecC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNH--NLLLIAWLREG--V---SEARSI----IHSGGRYSITTA---GALHIRDTG 75 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~--~~~~vsW~kd~--~---~~~~~~----~~~~~r~~v~~~---G~L~I~~v~ 75 (114)
....|+...|.+|.+|.|.|.+.+... ....+.|+|.. . .++... ....+||.+..+ ..|.|++++
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~ 83 (126)
T 4ffy_L 4 LTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVE 83 (126)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC
T ss_pred EEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCC
Confidence 345677889999999999999865431 01278999953 1 111100 112578988643 369999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.+|+| .|.|.+.|.. ....+..++|.|++..
T Consensus 84 ~~DsG-~Y~C~~~~~~--~~~fg~gT~L~V~~~g 114 (126)
T 4ffy_L 84 TDDAA-TYYCQQNNED--PYTFGGGTKLEIKGGG 114 (126)
T ss_dssp GGGCE-EEEEEECSSS--SCEECCCEEEEEEC--
T ss_pred HHHCE-EEEEEEecCC--CcEECCCEEEEEecCC
Confidence 99995 9999999863 3346778999999764
No 304
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.26 E-value=2.3e-11 Score=78.72 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=55.4
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCee-------eeeee-----eccCCcEEEcc-----CCcEEEeecC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVS-------EARSI-----IHSGGRYSITT-----AGALHIRDTG 75 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~-------~~~~~-----~~~~~r~~v~~-----~G~L~I~~v~ 75 (114)
.|....+.+|.+|.|.|.+.+.... ..+.|+|.+.. +++.. ...++||.+.. +++|.|++++
T Consensus 3 ~~~~v~~~~G~~v~L~C~~~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 81 (116)
T 2or8_A 3 SYVEVKGVVGHPVTLPCTYSTYRGI-TTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSV 81 (116)
T ss_dssp CCEEEEEETTSCEEECCBCCCTTCC-CCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCC
T ss_pred CcceEEEEeCCcEEEEEEeeCCCCC-cEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCC
Confidence 4567889999999999998542111 17899998621 11110 23468998742 3689999999
Q ss_pred CCCCCeeeEEEEeecc
Q psy9140 76 MEDSYIRYYCQTTHKL 91 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l 91 (114)
.+|+| .|.|.+.+..
T Consensus 82 ~~DsG-~Y~C~v~~~~ 96 (116)
T 2or8_A 82 ESDSG-LYCCRVEIPG 96 (116)
T ss_dssp GGGCE-EEEEEECCSS
T ss_pred cccCE-EEEEEEEcCC
Confidence 99995 9999999864
No 305
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.26 E-value=2.7e-11 Score=87.84 Aligned_cols=101 Identities=16% Similarity=0.244 Sum_probs=69.9
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeee---------eeccCCcEEEccCC-----
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARS---------IIHSGGRYSITTAG----- 67 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~---------~~~~~~r~~v~~~G----- 67 (114)
.+.|...+.+..|.+|++|.|.|.+.+...+...+.|+|.. .. ++.. .....+||.+..++
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 35678889999999999999999986532121279999743 11 1100 01124699987433
Q ss_pred cEEEeecCCCCCCeeeEEEEeecc---------CCcEEeCCCeEEEEecc
Q psy9140 68 ALHIRDTGMEDSYIRYYCQTTHKL---------TGERKISPPSQVMVSEI 108 (114)
Q Consensus 68 ~L~I~~v~~~D~gg~Y~C~a~n~l---------~~~~~~s~~a~L~V~~~ 108 (114)
.|.|++++.+|+| .|.|.+.|.. ......+..+.|.|.++
T Consensus 86 ~L~I~~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~ 134 (256)
T 3juy_B 86 YMELRSLRSADTA-VYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSG 134 (256)
T ss_dssp EEEECSCCGGGCE-EEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSC
T ss_pred EEEECCCCcccCE-EEEEeEEeccccccccccccceeEECCceEEeecCC
Confidence 4999999999995 9999999961 12334566788999875
No 306
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.26 E-value=3.5e-11 Score=85.92 Aligned_cols=85 Identities=20% Similarity=0.267 Sum_probs=65.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCC-Ccc--eEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNH-NLL--LIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~-~~~--~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
+...+ +..+.+|.++.|.|.+.+.+. +.. .++|++++..+. . -..++.|.|.+++.+|+| .|+|.
T Consensus 174 ~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~-----~-----~~~~~~L~i~~v~~~d~G-~Y~C~ 241 (262)
T 3rjd_A 174 LNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLR-----G-----RNTSSEYQILTARREDSG-LYWCE 241 (262)
T ss_dssp EEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEE-----E-----EESCCEEEESSCCGGGCE-EEEEE
T ss_pred EeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEec-----c-----cCCCceEEEEEechhhCe-EEEEE
Confidence 44444 667999999999999977654 322 579999998641 1 123578999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEe
Q psy9140 87 TTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~ 106 (114)
|.|..+...+.|....|.|+
T Consensus 242 a~n~~G~~~~~s~~~~l~V~ 261 (262)
T 3rjd_A 242 AATEDGNVLKRSPELELQVL 261 (262)
T ss_dssp EEETTSSCEEECCCEEECEE
T ss_pred EEcccCceEEecCCeEEEEe
Confidence 99999877777888888775
No 307
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.26 E-value=2.2e-11 Score=79.54 Aligned_cols=93 Identities=18% Similarity=0.223 Sum_probs=65.3
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCC----CcceEEEeeCC--e---eeeeee----eccCCcEEEccCC---cEEEeec
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNH----NLLLIAWLREG--V---SEARSI----IHSGGRYSITTAG---ALHIRDT 74 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~----~~~~vsW~kd~--~---~~~~~~----~~~~~r~~v~~~G---~L~I~~v 74 (114)
...|++..+.+|.+|.|.|.+.+... ....+.|+|.. . .++... ....+||.+..++ .|.|+++
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 84 (114)
T 1eeq_A 5 TQSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSL 84 (114)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCC
Confidence 44578889999999999999855431 11278999964 2 121100 0125799886433 7999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+.+|+| .|.|.+.+. +...-...++|.|+
T Consensus 85 ~~~DsG-~Y~C~~~~~--~~~~fg~GT~l~V~ 113 (114)
T 1eeq_A 85 QAEDVA-VYYCQQYYS--HPYSFGQGTKLEIK 113 (114)
T ss_dssp CGGGCE-EEEEEECSS--SSCEECCCEEEEEC
T ss_pred CcccCE-EEEEEEeeC--CeEEECCCEEEEEe
Confidence 999995 999999985 33345668888885
No 308
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.26 E-value=1.6e-11 Score=86.29 Aligned_cols=91 Identities=21% Similarity=0.232 Sum_probs=63.4
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee--------eccCCcEEEccC-----CcEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI--------IHSGGRYSITTA-----GALHIRD 73 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~--------~~~~~r~~v~~~-----G~L~I~~ 73 (114)
.+|++..+.+|.+|.|.|.+.+...+...+.|+|++ ... +... ....+||.+..+ +.|.|++
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 84 (210)
T 3d9a_H 5 QESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNS 84 (210)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred ecCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECC
Confidence 457888999999999999996643211289999863 221 1100 012579988642 2899999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+.+|+| .|+|.|.|.. ..+..+.|.|..
T Consensus 85 v~~~D~G-~Y~C~~~~~~----~~~~~~~l~V~~ 113 (210)
T 3d9a_H 85 VTTEDTA-TYYCANWDGD----YWGQGTLVTVSA 113 (210)
T ss_dssp CCGGGCE-EEEEEETTSS----CBCCCEEEEECC
T ss_pred CCcccCE-EEEEEEecCc----ccccceEEEecc
Confidence 9999995 9999999963 134456787763
No 309
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.26 E-value=8.1e-12 Score=86.93 Aligned_cols=92 Identities=15% Similarity=0.063 Sum_probs=62.7
Q ss_pred eeEEEeCCeEEEEeecCCCCCC-cc-eEEEeeCCeeeeeee-------eccCCcEEE--ccCCcEEEeecCCCCCCeeeE
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHN-LL-LIAWLREGVSEARSI-------IHSGGRYSI--TTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~-~~-~vsW~kd~~~~~~~~-------~~~~~r~~v--~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
...|.+|++|.|.|.+.+.... +. .+.|.|++..+.... ..-.+|..+ ..++.|.|.+|+.+|+| .|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G-~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEG-TYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCE-EEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCe-EEE
Confidence 4678999999999998543211 22 899999988652100 011345544 34679999999999995 999
Q ss_pred EEEeeccCCcEEe--CCCeEEEEecc
Q psy9140 85 CQTTHKLTGERKI--SPPSQVMVSEI 108 (114)
Q Consensus 85 C~a~n~l~~~~~~--s~~a~L~V~~~ 108 (114)
|.|.|..+..... +....|.|..+
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECC
T ss_pred EEEEcCCCCccccccccEEEEEEcCC
Confidence 9999976543221 33567777664
No 310
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.26 E-value=3.4e-11 Score=86.07 Aligned_cols=96 Identities=20% Similarity=0.340 Sum_probs=66.1
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee--e-eee---------eccCCcEEEcc-----CCcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE--A-RSI---------IHSGGRYSITT-----AGALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~--~-~~~---------~~~~~r~~v~~-----~G~L~I 71 (114)
..+|+...+.+|.+|.|.|.+.++......+.|+|++ ..+ + ... ....+||.+.. ++.|.|
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (225)
T 1op3_H 4 LVESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQM 83 (225)
T ss_dssp EEEECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EEcCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEE
Confidence 3467788999999999999986543111279999864 221 1 000 01257998864 358999
Q ss_pred eecCCCCCCeeeEEEEeeccC-----CcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLT-----GERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~-----~~~~~s~~a~L~V~~ 107 (114)
++++.+|+| .|.|.+.|..+ .....+..+.|.|..
T Consensus 84 ~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (225)
T 1op3_H 84 HKMRVEDTA-IYYCARKGSDRLSDNDPFDAWGPGTVVTVSP 123 (225)
T ss_dssp CSCCGGGCE-EEEEEEECCSSCCSSCCEEEECCCEEEEEES
T ss_pred CCCChhhCE-EEEEEEecCCCccccccceeecCCEEEeccc
Confidence 999999995 99999999753 111234567888885
No 311
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.26 E-value=4.8e-12 Score=88.00 Aligned_cols=85 Identities=18% Similarity=0.114 Sum_probs=59.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTH 89 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n 89 (114)
+...| +..+.+|.++.|.|.+.+. + ..+.|.|++..+. ...+ ....++.|.|.+|+.+|+| .|+|.|.|
T Consensus 97 i~~~p-~~~v~~G~~v~l~C~~~~~--~-~~~~w~k~g~~~~-----~~~~-~~~~~~~L~i~~v~~~D~G-~Y~C~a~n 165 (184)
T 2gi7_A 97 LSAQP-GPAVSSGGDVTLQCQTRYG--F-DQFALYKEGDPAP-----YKNP-ERWYRASFPIITVTAAHSG-TYRCYSFS 165 (184)
T ss_dssp EEEEC-CCSSCCTTCEEEEEECSSC--C-CEEEEEECCCCTT-----SCCC-CEEEEESSSEEEETTCCSE-EEEEEEEC
T ss_pred EEeCC-CceecCCCcEEEEEEcCCC--C-cEEEEEECCCcCc-----ceec-CCCceEEEEEccCCccCCe-EEEEEEEe
Confidence 55555 5678899999999998542 2 2789999998541 1222 2334789999999999995 99999999
Q ss_pred ccCCc--EEeCCCeEEEE
Q psy9140 90 KLTGE--RKISPPSQVMV 105 (114)
Q Consensus 90 ~l~~~--~~~s~~a~L~V 105 (114)
..... ...|....|.|
T Consensus 166 ~~~~~~~s~~S~~~~l~V 183 (184)
T 2gi7_A 166 SRDPYLWSAPSDPLELVV 183 (184)
T ss_dssp TTSTTBCCCCCCCEEEEC
T ss_pred CCCCcccCCCCCcEEEEe
Confidence 75321 12344666655
No 312
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.26 E-value=2.2e-11 Score=79.96 Aligned_cols=95 Identities=21% Similarity=0.265 Sum_probs=63.8
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeeeeccCCcEEEcc-----CCcEEEeecCCCCCCee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSIIHSGGRYSITT-----AGALHIRDTGMEDSYIR 82 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~~~~~~r~~v~~-----~G~L~I~~v~~~D~gg~ 82 (114)
....|.+..+.+|.+|.|.|.+.+...+...+.|+|+. ..... ....++||.+.. +..|.|++++.+|+| .
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~-~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG-~ 80 (113)
T 1sq2_N 3 VDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEE-SISKGGRYVETVNSGSKSFSLRINDLTVEDGG-T 80 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCE-ECCCBTTEEEEEETTTTEEEEEECSCCGGGCE-E
T ss_pred eEeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceE-eEEeCCCEEEEEeCCCCEEEEEECCCChhhCE-E
Confidence 34568888999999999999985533111278999963 22100 123467998742 347999999999995 9
Q ss_pred eEEEEeecc---C------CcEEeCCCeEEEEe
Q psy9140 83 YYCQTTHKL---T------GERKISPPSQVMVS 106 (114)
Q Consensus 83 Y~C~a~n~l---~------~~~~~s~~a~L~V~ 106 (114)
|.|.+.|.. + ....-...++|.|+
T Consensus 81 Y~C~~~~~~~~~~~~~~~~~~~~fg~GT~L~V~ 113 (113)
T 1sq2_N 81 YRCGLGVAGGYCDYALCSSRYAECGDGTAVTVN 113 (113)
T ss_dssp EEEEECBTTTBCCGGGGGSTTCCBCCCEEEEEC
T ss_pred EEEEEEeCCCccceeEeehhhhhcCCceEEEeC
Confidence 999999831 0 11223447777764
No 313
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.26 E-value=1.9e-11 Score=88.14 Aligned_cols=97 Identities=16% Similarity=0.266 Sum_probs=62.3
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeee----e---------eccCCcEEEc-----cCCc
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARS----I---------IHSGGRYSIT-----TAGA 68 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~----~---------~~~~~r~~v~-----~~G~ 68 (114)
+.+.+.+.+..+.+|.++.|.|.+......+. .+.|+|++...... . ..-.+|+.+. .++.
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 45778889999999999999999852212233 89999976532100 0 0113777774 3489
Q ss_pred EEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 69 LHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 69 L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|.|.+|+.+|+| .|+|.|.|..... ..+....|.|.
T Consensus 86 L~I~~v~~~D~G-~Y~C~~~~~~~~~-~~~~~~~l~V~ 121 (268)
T 3mj6_A 86 LLLQDVQKADEG-IYTCEIRLKNESM-VMKKPVELWVL 121 (268)
T ss_dssp EEECSCCGGGCE-EEEEEEEETTCCC-EEEEEEEEEEE
T ss_pred EEECCCCHhHCE-EEEEEEEecCCcc-eEEEEEEEEEe
Confidence 999999999995 9999999864332 23335566664
No 314
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.26 E-value=2.8e-11 Score=86.92 Aligned_cols=94 Identities=18% Similarity=0.278 Sum_probs=65.4
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee---------eccCCcEEEcc-----CCcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI---------IHSGGRYSITT-----AGALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~---------~~~~~r~~v~~-----~G~L~I 71 (114)
..+|++..+.+|.+|.|.|.+.+.......+.|+|++ ..+ +... ....+||.+.. ++.|.|
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (227)
T 1mju_H 4 LQQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQL 83 (227)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEE
Confidence 4568888999999999999986543111279999964 221 1000 01257998863 358999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
++|+.+|+| .|.|.+.|.. ....+..++|.|..
T Consensus 84 ~~v~~~D~G-~Y~C~~~~~~--~~~~~~~~~L~V~~ 116 (227)
T 1mju_H 84 SSLTSDDSA-VYYCANKLGW--FPYWGQGTLVTVSA 116 (227)
T ss_dssp CSCCGGGCE-EEEEEEEETT--EEEECCCEEEEECS
T ss_pred CCCCcccCE-EEEEEECCCC--ceEEcCcEEEEEcC
Confidence 999999995 9999999852 22344567888875
No 315
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=5.6e-13 Score=101.18 Aligned_cols=94 Identities=14% Similarity=0.150 Sum_probs=73.1
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCe-eeEE
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYI-RYYC 85 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg-~Y~C 85 (114)
.+.+.+.|++..+.+|+++.|.|.+.+.+.+ .+.|++++..+. ....++....+|.|.|.+++.+|+ | .|+|
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p--~i~W~~~~~~~~----~~~~~~~~~~~~~L~i~~v~~~D~-G~~Y~C 230 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLE--QAGWILTELEQS----ATVMKSGGLPSLGLTLANVTSDLN-RKNVTC 230 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEEECSSCC--CCCEEESCCCSS----EEECCCCCSSEEEEEEESCCSTTT-TCCEEE
T ss_pred CCceeccCCceEEeCCCcEEEEEEEecCCCC--EEEEEcCCceee----cccccceecccceEEEeeCChHHC-CCeEEE
Confidence 4668889999999999999999999776544 789999987642 122344456688999999999999 7 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEecccc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.|.|..+. .+..+.|.|..++.
T Consensus 231 ~a~n~~g~---~~~~~~l~V~~~P~ 252 (347)
T 2ifg_A 231 WAENDVGR---AEVSVQVNVSFPAS 252 (347)
T ss_dssp CCEETTEE---CCEEECCCCBEEEE
T ss_pred EEEcCCCC---EEEEEEEEEcCCCe
Confidence 99998643 34466777766655
No 316
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.26 E-value=1.3e-11 Score=86.38 Aligned_cols=88 Identities=15% Similarity=0.236 Sum_probs=64.3
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEee----CCeeeeeeeeccCC-cE--------EEccCCcEEEeecCCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR----EGVSEARSIIHSGG-RY--------SITTAGALHIRDTGMEDS 79 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k----d~~~~~~~~~~~~~-r~--------~v~~~G~L~I~~v~~~D~ 79 (114)
.+.+..+.+|.++.|.|.+.+++.+ .+.|+| ++..+. ..+. +. ....++.|.|.+++.+|+
T Consensus 124 ~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 197 (231)
T 3ojm_B 124 LPANASTVVGGDVEFVCKVYSDAQP--HIQWIKHVEKNGSKYG----PDGLPYLKVLKHSGINSSNAEVLALFNVTEADA 197 (231)
T ss_dssp CSCCEEEETTCCEEEECCEECSSCC--EEEEEEECCBTTBSBC----TTSCBCEEEEEECSTTCSCTTEEEECSCCGGGC
T ss_pred cCCceEEEeCCcEEEEEEEecCCCC--EEEEEECCCCCCcccc----CCCcceEeEecccccccCCccEEEEecCCHHHC
Confidence 3677889999999999999776544 899999 665431 1111 11 122346799999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.|+|.|.|..+. .+..+.|.|.+++.
T Consensus 198 -G~Y~C~a~n~~g~---~~~~~~l~V~~~p~ 224 (231)
T 3ojm_B 198 -GEYICKVSNYIGQ---ANQSAWLTVLPKQQ 224 (231)
T ss_dssp -EEEEEEEEETTEE---EEEEEEEEEECCC-
T ss_pred -eEEEEEEEeccce---EeeEEEEEEecCCC
Confidence 5999999998754 46678899987654
No 317
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.26 E-value=5.2e-13 Score=99.20 Aligned_cols=91 Identities=16% Similarity=0.220 Sum_probs=0.0
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEE
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C 85 (114)
+..++...|++..+.+|+++.|.|.+.+.... ..+.|+||+..+ ..+.|+.+ .++.|.|.+++.+|+| .|+|
T Consensus 7 ~p~p~~~~~~~~~v~~G~~v~l~C~~~~~~p~-~~v~W~k~g~~~-----~~~~~~~~-~~~~L~i~~v~~~D~G-~Y~C 78 (334)
T 1ry7_B 7 VPGPEPGQQEQLVFGSGDAVELSCPPPGGGPM-GPTVWVKDGTGL-----VPSERVLV-GPQRLQVLNASHEDSG-AYSC 78 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCcCcEEEecCCcEEEEeeCCCCCCC-cceEEEECCeeC-----CCcccEEe-ccceEEEeecccccCE-EEEE
Confidence 33455567999999999999999999764211 189999999853 45678876 4789999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEecc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|.|. +. .+....|.|.++
T Consensus 79 ~a~n~-~~---~~~~~~l~V~~~ 97 (334)
T 1ry7_B 79 RQRLT-QR---VLCHFSVRVTDA 97 (334)
T ss_dssp -----------------------
T ss_pred EEEeC-Ce---EEEEEEEEEecc
Confidence 99997 32 455677777654
No 318
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.25 E-value=2e-12 Score=93.93 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=67.1
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee--eeccCCcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS--IIHSGGRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~--~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
.+.+...|.+..+.+|.++.|.|.+.+.+.+ ..+.|.+++..+... .....+++. .++.|.|.+++.+|+ |.|+
T Consensus 186 ~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~-G~Y~ 261 (292)
T 4dkd_C 186 PPALTLVPAELVRIRGEAAQIVCSASSVDVN-FDVFLQHNNTKLAIPQQSDFHNNRYQ--KVLTLNLDQVDFQHA-GNYS 261 (292)
T ss_dssp SCEEEEESSCBCCCSSSCEEEEEEEEESSSC-CEEECCBSSCCCCCCBEEEEETTEEE--EEEEEEESSCCTTSC-EEEE
T ss_pred CCeEEccCCceeEecCCCEEEEEEecCCCCc-eEEEEeCCCcccccCccceeccceee--eEEEEEECccChhcC-eEEE
Confidence 4557788888888899999999999654322 278999998754211 011123332 346899999999999 5999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|.|.|.++. .+..+.|.|+...
T Consensus 262 C~a~N~~g~---~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 262 CVASNVQGK---HSTSMFFRVVESA 283 (292)
T ss_dssp EEEECSSCE---EEEEEEECC----
T ss_pred EEEecCCCC---ceeEEEEEEeeCC
Confidence 999999864 4567788877543
No 319
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=99.25 E-value=4.2e-11 Score=78.46 Aligned_cols=96 Identities=21% Similarity=0.182 Sum_probs=62.3
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCee---eeeee-eccCCcEEEc--------cCCcEEEeecCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVS---EARSI-IHSGGRYSIT--------TAGALHIRDTGM 76 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~---~~~~~-~~~~~r~~v~--------~~G~L~I~~v~~ 76 (114)
.+...|....+.+|.+|.|.|.+.+....+ .+.|+|++.. +++.. ....+||... .+..|.|++++.
T Consensus 9 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~-~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 87 (120)
T 2yz1_A 9 KVTQPEKSVSVAAGDSTVLNCTLTSLLPVG-PIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTP 87 (120)
T ss_dssp CEECCSSEEEECTTCCEEECCEESCCCSCC-CEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCG
T ss_pred EEECCCceEEEeCCCCEEEEeEECCCCCCc-EEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCH
Confidence 344567888999999999999986532111 7999998632 22211 1112355321 125799999999
Q ss_pred CCCCeeeEEEEeeccC--C--cEEeCCCeEEEEe
Q psy9140 77 EDSYIRYYCQTTHKLT--G--ERKISPPSQVMVS 106 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~--~--~~~~s~~a~L~V~ 106 (114)
+|+| .|.|.+.+.-. + ...-...++|.|+
T Consensus 88 ~DsG-~Y~C~~~~~~~~~~~~~~~fg~GT~L~V~ 120 (120)
T 2yz1_A 88 EDAG-TYYCVKFQKGPSEPDTEIQSGGGTEVYVL 120 (120)
T ss_dssp GGCE-EEEEEEEECCSSSSCEEEEECCCEEEEEC
T ss_pred HHCE-EEEEEEEcCCCCCCcceEEeCCcEEEEEC
Confidence 9995 99999998531 1 2234557777763
No 320
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.25 E-value=2.9e-11 Score=85.91 Aligned_cols=95 Identities=20% Similarity=0.291 Sum_probs=64.8
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee--------eccCCcEEEcc--C---CcEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI--------IHSGGRYSITT--A---GALHIRD 73 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~--------~~~~~r~~v~~--~---G~L~I~~ 73 (114)
.+|++..+.+|.+|.|.|.+.+...+...+.|+|++ .. +++.. ....+||.+.. + ..|.|++
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (215)
T 1c5d_H 5 LESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNS 84 (215)
T ss_dssp EEECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESS
T ss_pred EcCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECC
Confidence 467888999999999999986643211279999863 21 11100 01247998863 2 3899999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
++.+|+| .|.|.+.|..+.....+..++|.|..
T Consensus 85 v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~L~V~~ 117 (215)
T 1c5d_H 85 LQTEDTA-IYFCTREDGWNYFDYWGPGTMVTVSS 117 (215)
T ss_dssp CCGGGCE-EEEEEECCSSSCSCCBCCCEEEEECS
T ss_pred CCcccCE-EEEEEEecCCcccceEcCCEEEEecC
Confidence 9999995 99999998642111234467888874
No 321
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=99.25 E-value=1.1e-10 Score=76.12 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=64.6
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCC-----eeeeeee------e--ccCCcEEEcc---CC--cEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREG-----VSEARSI------I--HSGGRYSITT---AG--ALHIRD 73 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~-----~~~~~~~------~--~~~~r~~v~~---~G--~L~I~~ 73 (114)
+|....+.+|.+|.|.|.......... .+.|+|.. ..++... . ...+||.+.. ++ .|.|++
T Consensus 4 q~~~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 83 (116)
T 3bj9_1 4 QPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISE 83 (116)
T ss_dssp CCSEEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECS
T ss_pred cCCcEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECC
Confidence 466788999999999999854211112 79999853 1222210 0 1247998753 35 899999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
++.+|+| .|.|.+.+.- ...-...++|.|.+.
T Consensus 84 ~~~~DsG-~Y~C~~~~~~--~~~fg~gT~L~V~~~ 115 (116)
T 3bj9_1 84 LQPEDEA-MYYCAMGARS--THVFGSGTQLTVLSA 115 (116)
T ss_dssp CCGGGCE-EEEEEECCSS--CCEECCCEEEEEESC
T ss_pred CChhHCE-EEEEEEeCCC--CcEECCCEEEEEecC
Confidence 9999995 9999999852 224566889999875
No 322
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.25 E-value=5.5e-11 Score=84.05 Aligned_cols=96 Identities=21% Similarity=0.371 Sum_probs=65.6
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeeee-----------ccCCcEEEcc---CC--cE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSII-----------HSGGRYSITT---AG--AL 69 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~~-----------~~~~r~~v~~---~G--~L 69 (114)
..+|+...+.+|.+|.|.|.+.+...+...+.|+|++ .. ++.... .-.+||.+.. +| .|
T Consensus 4 v~~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 83 (220)
T 1pz5_B 4 VEESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYL 83 (220)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred EeccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEE
Confidence 3567888999999999999986542111289999964 21 111000 0147998863 23 89
Q ss_pred EEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 70 HIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 70 ~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|.+++.+|+| .|.|.+.|..+.....+..+.|.|..
T Consensus 84 ~I~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~l~V~~ 120 (220)
T 1pz5_B 84 QMNNLRAEDTG-IYYCTRGGAVGAMDYWGQGTSVTVSS 120 (220)
T ss_dssp EECSCCGGGCE-EEEEEEECTTSSEEEECCCEEEEECS
T ss_pred EEccCCHHHCE-EEEEEEecCCcccceECCCEEEEEcc
Confidence 99999999995 99999999643222334577888873
No 323
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=99.25 E-value=9.3e-11 Score=78.12 Aligned_cols=95 Identities=19% Similarity=0.173 Sum_probs=64.2
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCee---eeeee-eccCCcEEEc--------cCCcEEEeecCCCCC
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVS---EARSI-IHSGGRYSIT--------TAGALHIRDTGMEDS 79 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~---~~~~~-~~~~~r~~v~--------~~G~L~I~~v~~~D~ 79 (114)
..|+...+.+|.+|.|.|.+.+.... ..+.|+|++.. ++... ....+||... .+..|.|.+++.+|+
T Consensus 8 q~p~~~~v~~G~~vtL~C~~~~~~~~-~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds 86 (127)
T 2jju_A 8 QPEKSVSVAAGESATLRCAMTSLIPV-GPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADA 86 (127)
T ss_dssp CCCSEEEEETTSCEEECCEESCCCSC-CCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGC
T ss_pred eeCCeEEEeCCCCEEEEEEEeCCCCC-CEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHC
Confidence 35678899999999999998654211 17999997632 22211 0112477642 256899999999999
Q ss_pred CeeeEEEEeeccCC---cEEeCCCeEEEEecc
Q psy9140 80 YIRYYCQTTHKLTG---ERKISPPSQVMVSEI 108 (114)
Q Consensus 80 gg~Y~C~a~n~l~~---~~~~s~~a~L~V~~~ 108 (114)
| .|.|.+.|.-.. ...-...++|.|.+.
T Consensus 87 G-~Y~C~~~~~~~~~~~~~~fg~GT~L~V~~~ 117 (127)
T 2jju_A 87 G-TYYCVKFRKGSPDDVEFKSGAGTELSVRAK 117 (127)
T ss_dssp E-EEEEEEEECCSSSCEEEEECCCEEEEEEC-
T ss_pred E-EEEEEEEcCCCCccceEEeCCCeEEEEeec
Confidence 5 999999985221 223456789999854
No 324
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=99.25 E-value=1.3e-10 Score=79.52 Aligned_cols=101 Identities=18% Similarity=0.220 Sum_probs=71.8
Q ss_pred cccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC---CeeeeeeeeccCCcEEEccCC---cEEEeecCCCCC
Q psy9140 6 MSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE---GVSEARSIIHSGGRYSITTAG---ALHIRDTGMEDS 79 (114)
Q Consensus 6 v~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd---~~~~~~~~~~~~~r~~v~~~G---~L~I~~v~~~D~ 79 (114)
..+.....|....+.+|++|.|.|...+. .. .+.|+|. +..+.. .....+||.+..++ .|.|++++.+|+
T Consensus 17 ~~~~v~Q~p~~~~v~~G~svtL~C~~s~~-~~--~v~Wyrq~~~g~~~~~-l~~~~~rf~~~~~~~~~~L~I~~~~~~Ds 92 (134)
T 3kg5_A 17 ACSRIWQSPRFIARKRGFTVKMHCYMNSA-SG--NVSWLWKQEMDENPQQ-LKLEKGRMEESQNESLATLTIQGIRFEDN 92 (134)
T ss_dssp -CCCCEEECSEEEEETTCCEEEEEECCCT-TC--CCEEEEESSSSSCCEE-CCCCTTTEEEEECSSEEEEEECSCCTTTC
T ss_pred ccCEEEEeCCEEEEeCCCCEEEEEEECCC-Cc--eEEEEEECCCCCCcEE-EEEECCeEEEEccCCEEEEEECCCCcCcC
Confidence 34556677889999999999999998653 22 6899997 332211 11246899876443 699999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|.|.|.+.+...........++|.|...+.+
T Consensus 93 -g~Y~C~~~~~~~~~~~fg~GT~L~V~~~p~~ 123 (134)
T 3kg5_A 93 -GIYFCQQKCNNTSEVYQGCGTELRVMGFSTL 123 (134)
T ss_dssp -EEEEEEEECTTTCCEEECCCEEEEEECC---
T ss_pred -EEEEEEEEcCCCCceEECCCEEEEEecCCCH
Confidence 5999999986323444577899999976544
No 325
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.24 E-value=3.3e-11 Score=89.14 Aligned_cols=94 Identities=18% Similarity=0.273 Sum_probs=67.8
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEee--CCeeeeeee-------eccCCcEEEcc---CCcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLR--EGVSEARSI-------IHSGGRYSITT---AGALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~k--d~~~~~~~~-------~~~~~r~~v~~---~G~L~I~~v~~~ 77 (114)
+...|.+..+.+|.++.|.|.+.+.+ + .+.|+| ++..+.... ...++||.+.. ++.|.|.+++.+
T Consensus 165 ~~~~p~~~~v~~G~~v~L~C~~~~~~-~--~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 241 (282)
T 1qok_A 165 LTQSPAIMSASPGEKVTITCSASSSV-S--YMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAE 241 (282)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCC-S--CCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EecCCCEEEEcCCCcEEEEEEecCCC-c--eEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChh
Confidence 45567788899999999999997765 4 789999 555321100 01257898753 347999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|+| .|+|.|.|. +....+..++|.|+.+.
T Consensus 242 DsG-~Y~C~a~~~--~~~~fg~gt~l~V~~~~ 270 (282)
T 1qok_A 242 DAA-TYYCQQRSS--YPLTFGAGTKLELKRAA 270 (282)
T ss_dssp GCE-EEEEEECSS--SSCEECCCEEEEEC---
T ss_pred HCE-EEEEEEeeC--CCceEeCCEEEEEeccc
Confidence 995 999999985 33356778999998543
No 326
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.24 E-value=3.2e-11 Score=90.18 Aligned_cols=86 Identities=14% Similarity=0.130 Sum_probs=62.1
Q ss_pred ccceeEEEeCCeEEEEeec-----CCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 13 NTGNTFVLRGNIAVLQCNI-----PAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~-----~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
.|.+..+.+|.++.|.|.+ .+.+.+ .+.|+||+..+ ....++... +..|.|.+++.+|+| .|+|.|
T Consensus 126 ~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~--~v~W~k~~~~l-----~~~~~~~~~-~~~L~i~~v~~~d~G-~Y~C~a 196 (349)
T 4dep_C 126 LPVHKLYIEYGIQRITCPNVDGYFPSSVKP--TITWYMGCYKI-----QNFNNVIPE-GMNLSFLIALISNNG-NYTCVV 196 (349)
T ss_dssp CCEEEEETTCSEEEEECCSCTTSSCTTSCC--EEEEEETTEEC-----CSCSSEEEE-TTEEEEESCCGGGCE-EEEEEE
T ss_pred cCcceeeecCccEEEEcCCCcccccCCCCc--eEEEeeCCEEC-----CCccceeec-CCEEEEeeeeecCCc-EEEEEE
Confidence 3567788999999999975 332222 89999999853 223444433 356999999999995 999999
Q ss_pred eeccCCcE-EeCCCeEEEEec
Q psy9140 88 THKLTGER-KISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~-~~s~~a~L~V~~ 107 (114)
.|..++.. ..+....|.|.+
T Consensus 197 ~n~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 197 TYPENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp EEEETTEEEEEEEEEEEEEEC
T ss_pred EEeeCCEEEEEEEEEEEEEEc
Confidence 99885542 234566777765
No 327
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.24 E-value=3.6e-11 Score=89.00 Aligned_cols=99 Identities=17% Similarity=0.260 Sum_probs=68.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeee-ee-----------ccCCcEEEcc-----CCc
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARS-II-----------HSGGRYSITT-----AGA 68 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~-~~-----------~~~~r~~v~~-----~G~ 68 (114)
+....+|.+..+.+|.+|.|.|.+.++......+.|+|++ ..+... .. ...+||.+.. ++.
T Consensus 7 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 86 (261)
T 2xqy_G 7 QVQLQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVY 86 (261)
T ss_dssp CCEEECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEE
T ss_pred ceeEECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEE
Confidence 4445678889999999999999986543111279999874 221100 00 1257998864 358
Q ss_pred EEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 69 LHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 69 L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|.|++|+.+|+| .|.|.+.|........+..+.|.|..
T Consensus 87 L~I~~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~L~V~~ 124 (261)
T 2xqy_G 87 IQLSSLTSEDSA-VYYCGRLGYVYGFDYWGQGTTLTVSS 124 (261)
T ss_dssp EEECSCCGGGCE-EEEEEEECTTSSEEEECCCEEEEECS
T ss_pred EEEcCCCcccCe-EEEEEEecCCCcceEECCCEEEEEcc
Confidence 999999999995 99999998532222344567888875
No 328
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=99.24 E-value=3.5e-11 Score=80.07 Aligned_cols=89 Identities=17% Similarity=0.158 Sum_probs=63.1
Q ss_pred eeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeee-e--------eccCCcEEEc-cCCcEEEeecCCCCCCeeeE
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARS-I--------IHSGGRYSIT-TAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~-~--------~~~~~r~~v~-~~G~L~I~~v~~~D~gg~Y~ 84 (114)
...+.+|.+|+|+|.... .... .+.|++....++.. . ..-.+|+.+. .+|+|.|+|++.+|+| .|.
T Consensus 13 pv~~~~G~~VtL~c~~~~--~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG-~Y~ 89 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESL--PENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNS-TYI 89 (121)
T ss_dssp CCEEETTSCEEECCSSCC--CSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGCS-EEE
T ss_pred EEEEEeCCCEEEeCCCCC--CCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHCe-EEE
Confidence 357999999999998721 1223 89999976422210 0 1113577887 7899999999999996 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
|.+.+.-+ ...+...+|.|.++.
T Consensus 90 c~v~~~~~--~~~~~~~~L~V~~~~ 112 (121)
T 2edo_A 90 MRVLKKTG--NEQEWKIKLQVLDPV 112 (121)
T ss_dssp EEEEETTT--EEEECCEECEEECCS
T ss_pred EEEEcCCC--cEEEEEEEEEEECCC
Confidence 99997632 234567788888653
No 329
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.24 E-value=6.7e-11 Score=85.53 Aligned_cols=99 Identities=15% Similarity=0.302 Sum_probs=68.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeeee------c---cCCcEEEcc-----CCc
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSII------H---SGGRYSITT-----AGA 68 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~~------~---~~~r~~v~~-----~G~ 68 (114)
+.+...|++..+.+|.+|.|.|.+.+...+...+.|+|++ .. +++... . .++||.+.. ++.
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 3456678899999999999999985531111289999853 21 211100 0 468998863 347
Q ss_pred EEEeecCCCCCCeeeEEEEeeccCC----cEEeCCCeEEEEec
Q psy9140 69 LHIRDTGMEDSYIRYYCQTTHKLTG----ERKISPPSQVMVSE 107 (114)
Q Consensus 69 L~I~~v~~~D~gg~Y~C~a~n~l~~----~~~~s~~a~L~V~~ 107 (114)
|.|++++.+|+| .|.|.+.|.-.+ ....+..+.|.|..
T Consensus 82 L~I~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (242)
T 1hxm_B 82 LTIHNVEKQDIA-TYYCALWEAQQELGKKIKVFGPGTKLIITD 123 (242)
T ss_dssp EEECSCCGGGCE-EEEEEEEEECSSTTCEEEEECCCEEEEEES
T ss_pred EEECCCCcccCE-EEEEeeecCCccccccceeEcCcEEEEEcc
Confidence 999999999994 999999986311 22345578999986
No 330
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.24 E-value=3.7e-11 Score=85.92 Aligned_cols=96 Identities=21% Similarity=0.317 Sum_probs=65.2
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee---------eccCCcEEEccC-----CcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI---------IHSGGRYSITTA-----GALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~---------~~~~~r~~v~~~-----G~L~I 71 (114)
..+|.+..+.+|.+|.|.|.+.+.......+.|+|++ .. ++... ....+||.+..+ ..|.|
T Consensus 4 v~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (223)
T 1dee_B 4 LVESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQM 83 (223)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred EEcCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEE
Confidence 3567788999999999999986542111279999854 21 11100 012579998642 37999
Q ss_pred eecCCCCCCeeeEEEEeeccC---CcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLT---GERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~---~~~~~s~~a~L~V~~ 107 (114)
++|+.+|+| .|.|.+.|..+ .....+..+.|.|..
T Consensus 84 ~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~ 121 (223)
T 1dee_B 84 NSLRAEDTA-VYYCAKVKFYDPTAPNDYWGQGTLVTVSS 121 (223)
T ss_dssp CSCCGGGCE-EEEEEEESSSSTTCCEEEECCCEEEEECS
T ss_pred CCCCHHHCE-EEEEEEeccccCcccceeecCcEEEEEcc
Confidence 999999995 99999998642 111234567888874
No 331
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.24 E-value=2.9e-11 Score=87.66 Aligned_cols=96 Identities=21% Similarity=0.303 Sum_probs=65.8
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeee------------eeccCCcEEEccCCc-----EEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARS------------IIHSGGRYSITTAGA-----LHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~------------~~~~~~r~~v~~~G~-----L~I 71 (114)
..+|....+.+|++|.|.|.+.++..+...+.|+|.. ..+... .....+||.+..++. |.|
T Consensus 6 v~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (256)
T 3umt_A 6 LQQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLEL 85 (256)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred EEccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEE
Confidence 3456677899999999999986543111289998742 211000 012357999875444 999
Q ss_pred eecCCCCCCeeeEEEEeeccC-CcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLT-GERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~-~~~~~s~~a~L~V~~ 107 (114)
++++.+|+| .|.|.+.|... .....+..+.|.|.+
T Consensus 86 ~~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 86 RSLTSEDSA-VYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp CSCCGGGCE-EEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred CCCCcccCE-EEEEEEccCCCccccEECCCEEEEEcC
Confidence 999999995 99999998622 122346678899986
No 332
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.23 E-value=5.9e-11 Score=82.27 Aligned_cols=97 Identities=20% Similarity=0.235 Sum_probs=66.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeeee----eccCCcEEEccC---CcEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARSI----IHSGGRYSITTA---GALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~~----~~~~~r~~v~~~---G~L~I~~v~~~ 77 (114)
....|+...+.+|.+|.|.|.+.+...+ .+.|+|... .|++.. ....+||.+..+ ..|.|++++.+
T Consensus 19 v~q~p~~v~v~~G~sVtL~C~~s~~~~~--~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~ 96 (146)
T 2yc1_B 19 LTQSPATLSVSPGERATLSCRASQSVRS--YLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPE 96 (146)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEEeCCEEEEecCCCEEEEEEECCCCCC--EEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHH
Confidence 4455788899999999999998654322 789999641 222110 012579988542 36999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|+| .|.|.+.|.. .......++|.|.++..-
T Consensus 97 DsG-~Y~C~~~~~~--~~~fg~GT~L~V~~~~~~ 127 (146)
T 2yc1_B 97 DFA-IYYCQQYRYS--PRTFGQGTKVEIKRAAAE 127 (146)
T ss_dssp GCS-EEEEEECSSS--SCEECCCEEEEEC-----
T ss_pred HCE-EEEEEEecCC--CCeECCCEEEEEeCCccc
Confidence 995 9999999852 234566889999876643
No 333
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.23 E-value=4.6e-11 Score=85.24 Aligned_cols=96 Identities=19% Similarity=0.316 Sum_probs=65.6
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee---------eccCCcEEEccC-----CcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI---------IHSGGRYSITTA-----GALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~---------~~~~~r~~v~~~-----G~L~I 71 (114)
..+|+...+.+|.+|.|.|.+.++......+.|+|++ .. ++... ....+||.+..+ ..|.|
T Consensus 4 ~~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (220)
T 2fbj_H 4 LLESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQM 83 (220)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEE
T ss_pred EecCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEE
Confidence 3567788999999999999986543111279999853 21 11100 012479998743 38999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
++++.+|+| .|.|.+.|..+.....+..++|.|.+
T Consensus 84 ~~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 84 SKVRSEDTA-LYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp CSCCGGGCE-EEEEEEEETTTEEEEECCCEEEEECS
T ss_pred CCCChhhCE-EEEEEEeccccccceecCCEEEEecC
Confidence 999999995 99999998632111245567888875
No 334
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=99.23 E-value=6.9e-11 Score=77.23 Aligned_cols=94 Identities=26% Similarity=0.281 Sum_probs=63.9
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee-------eccCCcEEEcc---C--CcEEEee
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI-------IHSGGRYSITT---A--GALHIRD 73 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~-------~~~~~r~~v~~---~--G~L~I~~ 73 (114)
...|....+.+|.+|.|.|.+.+..... .+.|+|.. .. ++... ....+||.+.. + ..|.|++
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 82 (116)
T 1tvd_A 4 TQSSPDQTVASGSEVVLLCTYDTVYSNP-DLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISP 82 (116)
T ss_dssp ECCSCCEEEETTCCEEECCEEECCSSSC-CEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESS
T ss_pred ecCCCcEEEecCCeEEEEeEeEcCCCCc-EEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEcc
Confidence 4568888999999999999984321111 78999864 11 21100 11268998752 2 3799999
Q ss_pred cCCCCCCeeeEEEEeecc-CCcEEeCCCeEEEEe
Q psy9140 74 TGMEDSYIRYYCQTTHKL-TGERKISPPSQVMVS 106 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l-~~~~~~s~~a~L~V~ 106 (114)
++.+|+| .|.|.+.+.. .....-...++|.|+
T Consensus 83 ~~~~DsG-~Y~C~~~~~~~~~~~~fg~GT~l~V~ 115 (116)
T 1tvd_A 83 VRTEDSA-TYYCAFTLPPPTDKLIFGKGTRVTVE 115 (116)
T ss_dssp CCGGGCE-EEEEEEECTTTTCCEEECCCEEEEEE
T ss_pred CChHHCE-EEEEEEeCCCCccceEECCCeEEEEe
Confidence 9999995 9999999842 123344557788875
No 335
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.23 E-value=7.1e-12 Score=87.57 Aligned_cols=82 Identities=13% Similarity=0.109 Sum_probs=46.7
Q ss_pred eeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc----CCcEEEeecCCCCCCeeeEEEEeecc
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT----AGALHIRDTGMEDSYIRYYCQTTHKL 91 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~----~G~L~I~~v~~~D~gg~Y~C~a~n~l 91 (114)
+..+.+|.++.|.|.+.+.+ + .+.|+||+..+... ..+..... .+.|.|.+|+.+|+| .|+|.|.|..
T Consensus 108 ~~~v~~G~~v~L~C~~~~~p-~--~~~W~k~g~~~~~~----~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C~a~n~~ 179 (196)
T 2d3v_A 108 SPVVTSGENVTLQCGSRLRF-D--RFILTEEGDHKLSW----TLDSQLTPSGQFQALFPVGPVTPSHRW-MLRCYGSRRH 179 (196)
T ss_dssp ---------CEEEEEESSCC-S--EEEEEEC---CCEE----EEECEECTTSCEEEEEECCCCBTTBCE-EEEEEEEETT
T ss_pred CccccCCCcEEEEEEcCCCC-C--EEEEEccCCccccc----ccccccccCCCceeEEEeeecCcccCe-eEEEEEEccC
Confidence 45799999999999997754 3 79999999864211 11111222 378999999999995 9999999974
Q ss_pred CCc--EEeCCCeEEEE
Q psy9140 92 TGE--RKISPPSQVMV 105 (114)
Q Consensus 92 ~~~--~~~s~~a~L~V 105 (114)
... ...|.+..|.|
T Consensus 180 ~~~~~s~~S~~~~l~V 195 (196)
T 2d3v_A 180 ILQVWSEPSDLLEIPV 195 (196)
T ss_dssp EEEEECCCCCCEEECC
T ss_pred CCCccCCCCccEEEEe
Confidence 321 12344555554
No 336
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.23 E-value=1.1e-10 Score=85.97 Aligned_cols=97 Identities=19% Similarity=0.263 Sum_probs=67.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--e---eeeee---------eccCCcEEEcc----CCcE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--S---EARSI---------IHSGGRYSITT----AGAL 69 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~---~~~~~---------~~~~~r~~v~~----~G~L 69 (114)
..+...|++..+.+|.+|.|.|.+.+. +...+.|+|++. . +++.. ....+||.+.. ++.|
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~--~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL 102 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDF--QATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTL 102 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSS--CEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCC--CCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEE
Confidence 456777889999999999999998653 222899999741 1 11100 01257998864 2379
Q ss_pred EEeecCCCCCCeeeEEEEeeccC---CcEEeCCCeEEEEec
Q psy9140 70 HIRDTGMEDSYIRYYCQTTHKLT---GERKISPPSQVMVSE 107 (114)
Q Consensus 70 ~I~~v~~~D~gg~Y~C~a~n~l~---~~~~~s~~a~L~V~~ 107 (114)
.|.+|+.+|+| .|+|.+.|..+ .....+..++|.|..
T Consensus 103 ~I~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~ 142 (279)
T 2wbj_D 103 TVTSAHPEDSS-FYICSARDLTSGANNEQFFGPGTRLTVTE 142 (279)
T ss_dssp EESSCCGGGCE-EEEEEEEETTCBTSCCEEECCCEEEEEES
T ss_pred EEccCCccCCE-EEEEEEcccccCCccceeeCCCEEEEEec
Confidence 99999999995 99999999431 112335567888875
No 337
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.23 E-value=2.3e-12 Score=91.64 Aligned_cols=93 Identities=14% Similarity=0.237 Sum_probs=50.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--ee---eee----eeccCCcEEEccCC---cEEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--SE---ARS----IIHSGGRYSITTAG---ALHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~~---~~~----~~~~~~r~~v~~~G---~L~I~~v~~~ 77 (114)
+...|++..+.+|++|.|.|.+.+.+.+ .+.|+|++. .+ ++. .....+||.+..++ .|.|.+++.+
T Consensus 26 v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 26 VTQSPASLSMSIGEKVTIRCITSTDIDD--DMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp EEEECSBC-------CCEEEEEEEEESS--CEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred EEEcCCeEEEecCCCEEEEEecCCcCCC--eEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 3445888899999999999998664333 799998642 11 000 01124688776444 7999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
|+| .|+|.|.|..+. ..+..+.|.|..
T Consensus 104 D~G-~Y~C~~~~~~~~--~~~~~~~l~V~~ 130 (233)
T 3bqu_C 104 DVA-DYYCLQSDNLPY--TFGGGTNLEIKR 130 (233)
T ss_dssp CCS-EEEEEECSSSSC--CBCCCCBC---C
T ss_pred HCE-EEEEEEecCCce--eecCCEEEEEeC
Confidence 995 999999986532 133345666664
No 338
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=99.23 E-value=2.5e-10 Score=75.08 Aligned_cols=98 Identities=21% Similarity=0.309 Sum_probs=66.6
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeee-----eeccCCcEEEc--cCC---cEEEeec
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARS-----IIHSGGRYSIT--TAG---ALHIRDT 74 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~-----~~~~~~r~~v~--~~G---~L~I~~v 74 (114)
.+..|....+.+|.+|.|.|........+ .+.|+|.. . .++.. .....+||.+. +++ .|.|+++
T Consensus 2 ~~q~p~~~~v~~G~~vtL~C~~~~~~~~~-~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~ 80 (117)
T 3bp6_A 2 LTFYPAWLTVSEGANATFTCSLSNWSEDL-MLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDT 80 (117)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTC-EEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSC
T ss_pred ceecCCcEEEeCCCCEEEEeEeecCCCCC-EEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcC
Confidence 45668888999999999999985432112 79999852 2 12211 11236899884 233 6999999
Q ss_pred CCCCCCeeeEEEEeeccCCc-EEeCCCeEEEEeccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGE-RKISPPSQVMVSEIA 109 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~-~~~s~~a~L~V~~~~ 109 (114)
+.+|+| .|.|.+.+..... ...+..++|.|++..
T Consensus 81 ~~~Dsg-~Y~C~~~~~~~~~~~~~~~~t~L~V~~~~ 115 (117)
T 3bp6_A 81 RRNDSG-IYLCGAISLHPKLKIEESPGAELVVTERI 115 (117)
T ss_dssp CGGGCE-EEEEEEEECSSSCEEEECCCEEEEEC---
T ss_pred CHHHCE-EEEEEEEecCCccccccCCcEEEEEEhHh
Confidence 999995 9999998753322 234669999998764
No 339
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.23 E-value=2.1e-11 Score=100.96 Aligned_cols=97 Identities=15% Similarity=0.255 Sum_probs=75.4
Q ss_pred ccccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecC-CCCCCeee
Q psy9140 5 DMSSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTG-MEDSYIRY 83 (114)
Q Consensus 5 vv~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~-~~D~gg~Y 83 (114)
|...++...+.+..+.+|.++.|.|.+.+++.+ .+.|+||+..+ ..+.++.+.++|.|.|.+++ .+|+ |.|
T Consensus 524 V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~--~i~W~k~~~~l-----~~~~~~~~~~~~~l~i~~v~~~~d~-G~Y 595 (816)
T 3dmk_A 524 VYGLPYIRQMEKKAIVAGETLIVTCPVAGYPID--SIVWERDNRAL-----PINRKQKVFPNGTLIIENVERNSDQ-ATY 595 (816)
T ss_dssp ECSSCEECCCCCEEEETTCCEEEECCEECSSEE--EEEEEETTEES-----CCSTTEEECTTSEEEESSCCHHHHC-EEE
T ss_pred EecCCeeEccCCeEEecCCeEEEEEEecCCCCC--EEEEEECCeEc-----ccCCceEEecCCeEEEEecCccccC-EEE
Confidence 445566667778899999999999999775333 89999999854 45778889999999999998 6898 599
Q ss_pred EEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+|.|.|..+.. .+....|.|..++.+
T Consensus 596 ~C~a~n~~g~~--~~~~~~v~v~~~p~~ 621 (816)
T 3dmk_A 596 TCVAKNQEGYS--ARGSLEVQVMVLPRI 621 (816)
T ss_dssp EEEEEESSSCE--EEEEEEEEEECCCCC
T ss_pred EEEEEECCCce--eeeeEEEEEecCCcc
Confidence 99999986542 333556666665544
No 340
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.23 E-value=5e-11 Score=87.74 Aligned_cols=98 Identities=21% Similarity=0.320 Sum_probs=66.8
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee---------eccCCcEEEccCC-----cEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI---------IHSGGRYSITTAG-----ALH 70 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~---------~~~~~r~~v~~~G-----~L~ 70 (114)
+...|++..+.+|.++.|.|.+.+.+.+...+.|+|++ ..+ +... ...++||.+..++ .|.
T Consensus 137 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 216 (276)
T 3auv_A 137 QLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQ 216 (276)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred EEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEE
Confidence 34567788999999999999996543211289999963 211 1000 1235799887543 899
Q ss_pred EeecCCCCCCeeeEEEEeeccC--CcEEeCCCeEEEEecc
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLT--GERKISPPSQVMVSEI 108 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~--~~~~~s~~a~L~V~~~ 108 (114)
|.+++.+|+| .|+|.|.|..+ +.......++|.|+..
T Consensus 217 I~~v~~~DsG-~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~ 255 (276)
T 3auv_A 217 MNSLRAEDTA-VYYCARFVFFLPYAMDYWGQGTLVTVSSA 255 (276)
T ss_dssp ECSCCGGGCE-EEEEEEECSSTTCSCCCBCCCEEEEEC--
T ss_pred ECCCChhHCE-EEEEEEEcCcCCcCceEECCCEEEEEccc
Confidence 9999999995 99999999731 2223455789998743
No 341
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.22 E-value=8.2e-11 Score=83.94 Aligned_cols=95 Identities=24% Similarity=0.376 Sum_probs=67.4
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeeee-----eccCCcEEEccC------CcEEEeecC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARSI-----IHSGGRYSITTA------GALHIRDTG 75 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~~-----~~~~~r~~v~~~------G~L~I~~v~ 75 (114)
.....|++..+.+|.+|.|.|.+.+.. + .+.|+|.+ ....... ...++||.+..+ +.|.|++++
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~~~~~-~--~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~ 79 (207)
T 1ypz_E 3 QVEQSPSALSLHEGTDSALRCNFTTTM-R--SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQ 79 (207)
T ss_dssp SEEESCSEEEEETTCCEEEEEEESSCC-S--EEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCC
T ss_pred ccEECCCeEEEccCCcEEEEEEEeCCC-e--EEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCC
Confidence 455678889999999999999986432 2 79999853 2111100 124689998754 479999999
Q ss_pred CCCCCeeeEEEEeeccC--------CcEEeCCCeEEEEec
Q psy9140 76 MEDSYIRYYCQTTHKLT--------GERKISPPSQVMVSE 107 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~--------~~~~~s~~a~L~V~~ 107 (114)
.+|+| .|.|.+.+..+ .+......++|.|..
T Consensus 80 ~~D~G-~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~ 118 (207)
T 1ypz_E 80 LEDSG-TYFCAADTWHISEGYELGTDKLVFGQGTQVTVEP 118 (207)
T ss_dssp GGGCE-EEEEEEECBCCCTTCCCCCCCCEECCCEEEEEEC
T ss_pred HHHCE-EEEEEEecCCcccccccccceeeecCccEEEEcc
Confidence 99995 99999998632 122334578999985
No 342
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.22 E-value=3.6e-11 Score=85.70 Aligned_cols=96 Identities=20% Similarity=0.259 Sum_probs=65.4
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeee-e-----------eccCCcEEEccC-----CcEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARS-I-----------IHSGGRYSITTA-----GALH 70 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~-~-----------~~~~~r~~v~~~-----G~L~ 70 (114)
+...|.+..+.+|.++.|.|.+.+++.+...+.|+|++ ..+... . ....+||.+..+ +.|.
T Consensus 122 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 201 (240)
T 1moe_A 122 QLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQ 201 (240)
T ss_dssp EEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEE
Confidence 55667888999999999999997654322279999962 221000 0 013568988643 4799
Q ss_pred EeecCCCCCCeeeEEEEeecc--CC-cEEeCCCeEEEEe
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKL--TG-ERKISPPSQVMVS 106 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l--~~-~~~~s~~a~L~V~ 106 (114)
|.+++.+|+| .|+|.|.+.. +. .......++|.|.
T Consensus 202 I~~v~~~D~G-~Y~C~a~~~~~~~~~~~~fg~gt~l~V~ 239 (240)
T 1moe_A 202 LTSLTSEDTA-VYYCAPFGYYVSDYAMAYWGQGTSVTVS 239 (240)
T ss_dssp ECSCCGGGCE-EEEEEECSTTSCTTSCCCCCCCEEEEEC
T ss_pred ECcCCHHHCE-EEEEEEEecCCCCcCeEEECCCeEEEeC
Confidence 9999999995 9999999532 11 1223457788875
No 343
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.22 E-value=2.4e-11 Score=89.90 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=66.1
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCC-cc-eEEEeeCCee--eee----------eeeccCCcEEEc----cCCcEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHN-LL-LIAWLREGVS--EAR----------SIIHSGGRYSIT----TAGALH 70 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~-~~-~vsW~kd~~~--~~~----------~~~~~~~r~~v~----~~G~L~ 70 (114)
.|...|++..+.+|+++.|.|.+.+...+ +. .+.|+|++.. ... ......+|+.+. .++.|.
T Consensus 16 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 95 (331)
T 3u83_A 16 QVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIR 95 (331)
T ss_dssp -----CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEE
T ss_pred ceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEE
Confidence 35566777899999999999998653222 23 8999996421 000 011345788875 468899
Q ss_pred EeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
|.+++.+|+| .|+|.+.+...+ ..+..+.|.|..++.+
T Consensus 96 I~~v~~~D~G-~Y~C~~~~~~~~--~~~~~~~l~V~~~p~~ 133 (331)
T 3u83_A 96 LSRLELEDEG-VYICEFATFPTG--NRESQLNLTVMAKPTN 133 (331)
T ss_dssp ECSCCGGGCE-EEEEEEEEETTE--EEEEEEEEEEEBCCEE
T ss_pred EcccCcccCc-EEEEEEEecCCC--ccEEEEEEEEecCCcc
Confidence 9999999995 999985543333 2555788888876544
No 344
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.22 E-value=2.1e-11 Score=89.21 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=65.1
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCC---CcceEEEeeCC--ee---eeeee----eccCCcEEEccC---CcEEEee
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNH---NLLLIAWLREG--VS---EARSI----IHSGGRYSITTA---GALHIRD 73 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~---~~~~vsW~kd~--~~---~~~~~----~~~~~r~~v~~~---G~L~I~~ 73 (114)
.+...|.+..|.+|.+|.|.|.+.+... ....+.|+|++ .. +++.. ...++||.+..+ +.|.|.+
T Consensus 17 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 96 (268)
T 1x9q_A 17 VMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINR 96 (268)
T ss_dssp CEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESS
T ss_pred eEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECC
Confidence 3666788999999999999999866431 01279999863 21 11100 012579988643 3799999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
++.+|+| .|.|.+.|... ...+..++|.|..+
T Consensus 97 v~~~DsG-~Y~C~~~~~~~--~~~~~~~~L~V~~~ 128 (268)
T 1x9q_A 97 VEAEDLG-VYFCSQSTHVP--WTFGGGTKLEIKSS 128 (268)
T ss_dssp CCGGGCE-EEEEEECSSSS--CEECCCEEEC----
T ss_pred CChhHCE-EEEEEEecCCC--ceEcCCEEEEEccC
Confidence 9999995 99999998742 12455677887754
No 345
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.22 E-value=2.3e-11 Score=89.38 Aligned_cols=91 Identities=13% Similarity=-0.034 Sum_probs=64.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+.+.|.. .|.+|++++|.|.+++. ...+.|+|++..+. .....+.....++.|.|.+|+.+|+| .|+|.+
T Consensus 8 P~i~~~P~~-~v~~G~~VtL~C~~~~~---~~~~~w~k~g~~~~---~~~~~~~~~~~~~~L~I~~v~~~DsG-~Y~C~~ 79 (242)
T 1p6f_A 8 PFIWAEPHF-MVPKEKQVTICCQGNYG---AVEYQLHFEGSLFA---VDRPKPPERINKVKFYIPDMNSRMAG-QYSCIY 79 (242)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTT---CCEEEEEETTEEEE---EECCSSCTTCCEEEEEECSCCGGGCE-EEEEEE
T ss_pred CEEEeeCCC-ccCCCCcEEEEEeeCCC---CcEEEEEECCCccc---cccccccCCcceeEEEecCCCcccCe-EEEEEE
Confidence 447788877 89999999999998642 12789999998642 11111111234678999999999995 999999
Q ss_pred eeccCCcEEeCCCeEEEEec
Q psy9140 88 THKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 88 ~n~l~~~~~~s~~a~L~V~~ 107 (114)
.|... ....|....|.|.+
T Consensus 80 ~~~~~-~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 80 RVGEL-WSEPSNLLDLVVTE 98 (242)
T ss_dssp EETTE-ECCCCCCEEEEEEC
T ss_pred ecCCc-cccCCcceEEEeec
Confidence 87532 11246688898874
No 346
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.22 E-value=4.2e-11 Score=86.67 Aligned_cols=97 Identities=16% Similarity=0.241 Sum_probs=68.8
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeeee-------eccCCcEEEccCC---cEEEeecCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSI-------IHSGGRYSITTAG---ALHIRDTGM 76 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~-------~~~~~r~~v~~~G---~L~I~~v~~ 76 (114)
.+...|.+..+.+|++|.|.|.+.+.+.++ .+.|+|. +..+.... ....+||.+..++ .|.|.+++.
T Consensus 143 ~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 221 (257)
T 3gkz_A 143 VLTQSPAIMSASPGEKVTLTCSASSSVSSS-HLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEA 221 (257)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCCGG-GEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEEcCCceEEEeCCCcEEEEEEEccCccce-EEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCCh
Confidence 456667888999999999999997643322 7899984 33211000 0114788876433 599999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+|+| .|+|.|.|. +....+..++|.|+...
T Consensus 222 ~D~G-~Y~C~~~~~--~~~~fg~gt~l~v~~~~ 251 (257)
T 3gkz_A 222 EDAA-SYFCHQWSS--FPFTFGSGTKLEIKRAP 251 (257)
T ss_dssp GGCE-EEEEEECSS--SSCEECCCEEEEECCC-
T ss_pred HHCE-EEEEEEccC--CceEEcCCEEEEEEeCC
Confidence 9995 999999985 34456779999998543
No 347
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.22 E-value=3.1e-11 Score=91.10 Aligned_cols=92 Identities=17% Similarity=0.327 Sum_probs=65.0
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeee---eee---------eccCCcEEEccC-----CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEA---RSI---------IHSGGRYSITTA-----GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~---~~~---------~~~~~r~~v~~~-----G~L~I~ 72 (114)
.+|.+..+.+|++|.|.|.+.+...+...+.|+|++ ..+. +.. ...++||.+..+ +.|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 456778999999999999996542111289999973 3221 000 012579998643 489999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|+|.|.|... ..+..++|.|.+
T Consensus 85 ~v~~~D~G-~Y~C~~~n~~~---~~~~~~~l~V~~ 115 (344)
T 1za6_B 85 SLRSEDTA-VYFCTRSLNMA---YWGQGTLVTVSS 115 (344)
T ss_dssp SCCGGGCE-EEEEEETTTTC---EECCCEEEEECS
T ss_pred CCCcccCE-EEEEEEecCcc---eecCcEEEEEec
Confidence 99999995 99999999432 345677888873
No 348
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.22 E-value=4.5e-11 Score=77.55 Aligned_cols=92 Identities=14% Similarity=0.117 Sum_probs=63.2
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCee-----eeeee----eccCCcEEEcc---C--CcEEEeecCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVS-----EARSI----IHSGGRYSITT---A--GALHIRDTGMED 78 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~-----~~~~~----~~~~~r~~v~~---~--G~L~I~~v~~~D 78 (114)
.|....+.+|++|.|.|...+....+ .+.|+|.+.. ++... ...++||.+.. + ..|.|++++.+|
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~-~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~D 85 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDY-KKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSD 85 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTS-CEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGG
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccc-eEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHH
Confidence 46778999999999999985432222 6999997531 21110 12357998852 2 379999999999
Q ss_pred CCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 79 SYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+| .|.|.+.+... ..+...+|.|..++
T Consensus 86 sG-~Y~C~v~~~~~---~~~~~v~L~V~~~p 112 (113)
T 1zox_A 86 AG-IYWCGITKGGL---DPMFKVTVNIGPVP 112 (113)
T ss_dssp CE-EEEEEECCSSS---CCEEEEEEEEECC-
T ss_pred CE-EEEEeeEcCCC---CccEEEEEEEEcCC
Confidence 95 99999998631 13446678877543
No 349
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.22 E-value=6.6e-11 Score=88.12 Aligned_cols=98 Identities=16% Similarity=0.210 Sum_probs=68.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCc----ceEEEeeCC--eeeeeeee-------ccCCcEEEccC---CcEEEee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNL----LLIAWLREG--VSEARSII-------HSGGRYSITTA---GALHIRD 73 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~----~~vsW~kd~--~~~~~~~~-------~~~~r~~v~~~---G~L~I~~ 73 (114)
+...|.+..+.+|+++.|.|.+.+.+.+. ..+.|+|++ ..+..... ..++||.+..+ +.|.|.+
T Consensus 162 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 241 (291)
T 2gki_A 162 MSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISS 241 (291)
T ss_dssp EECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred EEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECC
Confidence 34456778899999999999996654320 168999963 21100000 11579987543 3799999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
++.+|+| .|+|.|.|. +.......++|.|+....
T Consensus 242 v~~~DsG-~Y~C~a~~~--~~~~fg~gt~l~v~~~~~ 275 (291)
T 2gki_A 242 VQAEDLA-VYYCKQSYY--HMYTFGSGTKLEIKHHHH 275 (291)
T ss_dssp CCGGGCE-EEEEEEEET--TEEEECCCEEEEEECC--
T ss_pred CCHHHCE-EEEEEEccC--CceEEcCCEEEEEEeeEc
Confidence 9999995 999999995 444567788999987653
No 350
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.22 E-value=1.4e-11 Score=98.50 Aligned_cols=91 Identities=19% Similarity=0.223 Sum_probs=68.3
Q ss_pred ccceeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCeeeeeee-------eccCCcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 13 NTGNTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGVSEARSI-------IHSGGRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~~~~~~~-------~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
..++..+.+|++++|.|.+ .+.+.+ .++|+|++..+.... ..-.+|+.+.++|+|.|.+|+.+|+| .|+
T Consensus 372 l~~~~~~~~G~~v~L~C~~~~~~~~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G-~Y~ 448 (581)
T 3o3u_N 372 SAQNITARIGEPLVLKCKGAPKKPPQ--RLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEG-IFR 448 (581)
T ss_dssp CCEEEEEETTSCEEECCTTCCSSSSC--EEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCE-EEE
T ss_pred HhcccceecCCcEEEeeeecCCCCCc--eEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCe-EEE
Confidence 4556789999999999998 554333 899999876321100 01256899999999999999999995 999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|.+.|..+.. .+..++|.|..+
T Consensus 449 C~~~n~~~~~--~~~~~~l~V~~~ 470 (581)
T 3o3u_N 449 CQAMNRNGKE--TKSNYRVRVYQI 470 (581)
T ss_dssp EEEECTTSCE--EEEEEEEEEEBC
T ss_pred EEEEcCCCce--eEEEEEEEEEcC
Confidence 9999986542 244778888763
No 351
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.22 E-value=2.5e-11 Score=89.30 Aligned_cols=87 Identities=18% Similarity=0.324 Sum_probs=59.3
Q ss_pred eeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeee------------eeccCCcEEEc----cCCcEEEeecCCCC
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARS------------IIHSGGRYSIT----TAGALHIRDTGMED 78 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~------------~~~~~~r~~v~----~~G~L~I~~v~~~D 78 (114)
+..|.+|++|.|.|.+.+. ++. .++|+|++...... .....+|+.+. .++.|.|.+|+.+|
T Consensus 8 ~vtv~~G~~v~L~C~v~~~--~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVN--ETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSD 85 (308)
T ss_dssp SCEEETTSCEEECCBCCCS--SCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGG
T ss_pred EeEEEcCCcEEEEEEecCC--CCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHH
Confidence 6789999999999998543 233 79999976432100 01124566653 35689999999999
Q ss_pred CCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 79 SYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+| .|+|.|.|...+. .+..+.+.+..
T Consensus 86 ~G-~Y~C~a~n~~~~~--~~~~~~~~v~~ 111 (308)
T 4fom_A 86 SG-KYICKAVTFPLGN--AQSSTTVTVLV 111 (308)
T ss_dssp CE-EEEEEEEETTTEE--EEEEEEEEEEB
T ss_pred CE-EEEEEEeeCCCcc--eeeeeEEEeee
Confidence 95 9999999864443 34445555553
No 352
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.22 E-value=1.9e-11 Score=90.79 Aligned_cols=93 Identities=16% Similarity=0.163 Sum_probs=65.1
Q ss_pred eccc-cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCee
Q psy9140 4 GDMS-SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 4 avv~-~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~ 82 (114)
.++. +.|...|. ..|.+|+++.|.|.+.+. .+ .+.|+||+..+.. .+.....++.|.|.+|+.+|+| .
T Consensus 20 ~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~--~~~W~k~g~~~~~------~~~~~~~~~~L~I~~v~~~D~G-~ 88 (316)
T 3vh8_G 20 GGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FN--NFMLYKEDRIHIP------IFHGRIFQESFNMSPVTTAHAG-N 88 (316)
T ss_dssp ----CCEEEEESC-SEEETTSCEEEEEEBTTB-CC--SEEEEESSCSSSC------HHHHCCBSSCEEECSCCGGGCE-E
T ss_pred CCCCCCEeeccCC-CccCCCCCEEEEEEccCC-Cc--eEEEEeCCCccce------eecCCcceEEEEECCCCcccCe-E
Confidence 3444 44778887 789999999999999775 22 7899999985311 1111234789999999999995 9
Q ss_pred eEEEEeeccCC--cEEeCCCeEEEEec
Q psy9140 83 YYCQTTHKLTG--ERKISPPSQVMVSE 107 (114)
Q Consensus 83 Y~C~a~n~l~~--~~~~s~~a~L~V~~ 107 (114)
|+|.|.|..+. ....|....|.|..
T Consensus 89 Y~C~a~~~~~~~~~~~~s~~~~l~V~~ 115 (316)
T 3vh8_G 89 YTCRGSHPHSPTGWSAPSNPVVIMVTG 115 (316)
T ss_dssp EEEEEBCSSSSSSBCCCCCCEEEEEEC
T ss_pred EEEEEEcCCCCcceecCCCcEEEEEec
Confidence 99999875332 12345678888865
No 353
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.22 E-value=2.5e-11 Score=87.47 Aligned_cols=88 Identities=16% Similarity=0.242 Sum_probs=61.1
Q ss_pred ccceeEEEeCCeEEEEeec---CCCCCCcceEEEeeCCeeeeeee-------------eccCC----cEEE-----ccCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNI---PAYNHNLLLIAWLREGVSEARSI-------------IHSGG----RYSI-----TTAG 67 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~---~~~~~~~~~vsW~kd~~~~~~~~-------------~~~~~----r~~v-----~~~G 67 (114)
.|.+..+.+|.++.|.|.+ .+.+.+ .+.|+|++....... ...++ |+.+ ..++
T Consensus 124 ~p~~~~v~~G~~v~L~C~~~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 201 (268)
T 3mj6_A 124 EPRDLRVRVGDTTQMRCSIQSTEEKRVT--KVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDG 201 (268)
T ss_dssp CCSEEEEETTCCEEECCBCEESSSSCCC--EEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBC
T ss_pred CCCccccccCCcEEEEEEecCCCCCCcc--ceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeE
Confidence 5667889999999999999 443333 899999533110000 11222 4444 3478
Q ss_pred cEEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 68 ALHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 68 ~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|.|.+++.+|+| .|+|.|.|..+. .+..+.|.|.
T Consensus 202 ~L~i~~v~~~D~G-~Y~C~a~n~~g~---~~~~~~l~V~ 236 (268)
T 3mj6_A 202 SIKLQTVKESDQG-IYTCSIYVGKLE---SRKTIVLHVV 236 (268)
T ss_dssp CEEECSCCGGGCE-EEEEEEEETTEE---EEEEEEEEEE
T ss_pred EEEECcCChhhCe-EEEEEEEcCCce---EEEEEEEEEE
Confidence 9999999999995 999999996542 4557788883
No 354
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.22 E-value=5.4e-12 Score=93.38 Aligned_cols=89 Identities=18% Similarity=0.216 Sum_probs=64.2
Q ss_pred ceeecc-ceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEe-ecCCCCCCeeeEEE
Q psy9140 9 DYEINT-GNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIR-DTGMEDSYIRYYCQ 86 (114)
Q Consensus 9 ~~~v~~-~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~-~v~~~D~gg~Y~C~ 86 (114)
.+.+.+ ....+.+|.++.|.|.+.+++.+. .++|+|++..+ ..+ .. ..++.|.|. +++.+|+| .|+|.
T Consensus 233 ~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-~i~W~~~~~~~-----~~~--~~-~~~~~L~i~~~v~~~d~G-~Y~C~ 302 (331)
T 3u83_A 233 EVTIEGFDGNWYLQRMDVKLTCKADANPPAT-EYHWTTLNGSL-----PKG--VE-AQNRTLFFKGPINYSLAG-TYICE 302 (331)
T ss_dssp EEEEECCCSCCBTTCCCEEEEEEEEEESCCC-EEEEEETTBSC-----CTT--EE-EETTEEEECSCCCGGGCE-EEEEE
T ss_pred eEEEecCCCceEeCCCeEEEEEeCcCCCCCC-EEEEEECCCcc-----ccc--ce-ecCcEEEEeCCCccccCe-EEEEE
Confidence 344344 344588999999999997764441 39999999853 222 22 257899999 99999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEecccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.|.++. .+..+.|.|++...
T Consensus 303 a~N~~G~---~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 303 ATNPIGT---RSGQVEVNITEAAA 323 (331)
T ss_dssp EEETTEE---EEEEEEECCBC---
T ss_pred EEecccc---ceEEEEEEEeccch
Confidence 9999864 46678888886543
No 355
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.21 E-value=1.7e-10 Score=83.80 Aligned_cols=96 Identities=19% Similarity=0.284 Sum_probs=65.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--e---eeeee-------eccCCcEEEcc----CCcEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--S---EARSI-------IHSGGRYSITT----AGALHI 71 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~---~~~~~-------~~~~~r~~v~~----~G~L~I 71 (114)
..+...|++..+.+|.+|.|.|.+.. .. ..+.|+|++. . +++.. ....+||.+.. ++.|.|
T Consensus 4 ~~v~q~p~~v~v~~G~~v~L~C~~~~-~~--~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I 80 (252)
T 1oga_E 4 GGITQSPKYLFRKEGQNVTLSCEQNL-NH--DAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTV 80 (252)
T ss_dssp -CEECSCSEEEEETTCCEEECCEECS-CC--SEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEE
T ss_pred ccceEcCCeEEEcCCCcEEEEEEeCC-CC--CEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEE
Confidence 34566788999999999999999842 12 2899998631 1 11110 01247999863 468999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
++++.+|+| .|.|.+.|........+..+.|.|..
T Consensus 81 ~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~l~V~~ 115 (252)
T 1oga_E 81 TSAQKNPTA-FYLCASSSRSSYEQYFGPGTRLTVTE 115 (252)
T ss_dssp CSCCSCCCE-EEEEEEESSTTSCCEECCCEEEEEES
T ss_pred CcCChhhCE-EEEEEEecCCccceeECCCEEEEEec
Confidence 999999995 99999998521112234566788764
No 356
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.21 E-value=3.3e-11 Score=78.73 Aligned_cols=90 Identities=16% Similarity=0.191 Sum_probs=62.2
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCC--cc-eEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHN--LL-LIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~--~~-~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C 85 (114)
...+.|. ..|.+|+.++|.|.+...+.. .. .+.|.||+..+. . ...++.|.|.+|+.+|+| .|+|
T Consensus 10 ~l~~~p~-~~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~-----~-----~~~~~~l~i~~v~~~dsG-~Y~C 77 (108)
T 4hwn_A 10 ILRAVPS-AEPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQ-----S-----RGLSSEFQIPTASEDHSG-SYWC 77 (108)
T ss_dssp EEEEESC-SSCBTTCCEEEEEEC---------CCEEEEEETTEEEE-----E-----EESCCEEEESSCCGGGCE-EEEE
T ss_pred EEEecCC-CcCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCcc-----C-----CCcccEEEeCccCcccCe-EEEE
Confidence 3556664 458899999999998643221 01 389999998541 0 124688999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEecccc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.+.|..+.....|.+..|.|+.+..
T Consensus 78 ~~~~~~~~~~~~S~~l~L~V~g~~~ 102 (108)
T 4hwn_A 78 EAATEDNQVWKQSPQLEIRVQGASA 102 (108)
T ss_dssp EEECTTSSSEEECCCEEECCBC---
T ss_pred EEEeCCCceeccCCCEEEEEEecch
Confidence 9998754445678899999987643
No 357
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.21 E-value=8.1e-12 Score=90.68 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=59.2
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCC
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
|.+..+.+|.++.|.|.+.+++.+ .+.|+|++. .+.++|.|.+ ++.+|+| .|+|.|.|.++.
T Consensus 192 p~~~~v~~g~~~~l~C~~~g~P~p--~i~W~~~~~-------------~~~~~g~~~~--v~~~d~G-~Y~C~a~N~~G~ 253 (265)
T 2oz4_A 192 PGNWTWPENSQQTPMCQAWGNPLP--ELKCLKDGT-------------FPLPIGESVT--VTRDLEG-TYLCRARSTQGE 253 (265)
T ss_dssp CSEEEEETTCEECCCCCCEEESCC--EEEEEETTT-------------EECCTTSCEE--CCGGGCE-EEEEEEEETTEE
T ss_pred CCccEEcCCCeEEEEeECccCCCC--eEEEEECCc-------------ccCCCCcEEE--eehhhCe-EEEEEEECCCCc
Confidence 567889999999999999776554 899999986 2345677754 8999995 999999998753
Q ss_pred cEEeCCCeEEEEecc
Q psy9140 94 ERKISPPSQVMVSEI 108 (114)
Q Consensus 94 ~~~~s~~a~L~V~~~ 108 (114)
.+..+.|.|..|
T Consensus 254 ---~~~~~~l~V~~p 265 (265)
T 2oz4_A 254 ---VTREVTVNVLSP 265 (265)
T ss_dssp ---EEEEEEEEEECC
T ss_pred ---EEEEEEEEEecC
Confidence 566788988764
No 358
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.21 E-value=3.8e-11 Score=84.33 Aligned_cols=86 Identities=20% Similarity=0.196 Sum_probs=57.8
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc----CCcEEEeecCCCCCCeeeE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT----AGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~----~G~L~I~~v~~~D~gg~Y~ 84 (114)
.+.+.|. ..|.+|.++.|+|.+.+. + ..+.|+||+..+.. +.++.... ++.|.|.+|+ |+ |.|+
T Consensus 110 ~i~~~p~-~~v~~G~~v~L~C~~~~~--~-~~~~w~k~g~~~~~-----~~~~~~~~~~~~~~~L~i~~v~--d~-G~Y~ 177 (201)
T 1nkr_A 110 SLSAQPG-PTVLAGENVTLSCSSRSS--Y-DMYHLSREGEAHER-----RLPAGPKVNGTFQADFPLGPAT--HG-GTYR 177 (201)
T ss_dssp EEEEESC-SEECTTCEEEEEEEESSC--C-SEEEEEETTCSSCE-----EEECEEEETTEEEEEEEEEECC--SC-EEEE
T ss_pred ceecCCC-CccCCCCeEEEEEeCCCC--C-ceEEEEECCcccCc-----ccccccccCCceEEEEEeCCcC--CC-eeEE
Confidence 3555564 578999999999998642 1 27899999985421 11122221 5789999999 98 5999
Q ss_pred EEEeeccCC--cEEeCCCeEEEEe
Q psy9140 85 CQTTHKLTG--ERKISPPSQVMVS 106 (114)
Q Consensus 85 C~a~n~l~~--~~~~s~~a~L~V~ 106 (114)
|.|.+.... ....|.+..|.|+
T Consensus 178 C~a~~~~~~~~~s~~S~~~~l~V~ 201 (201)
T 1nkr_A 178 CFGSFHDSPYEWSKSSDPLLVSVT 201 (201)
T ss_dssp EEEEETTEEEEECCCCCCEEEEEC
T ss_pred EEEEcCCCCCcCCCCCCCEEEEeC
Confidence 999975211 1123567777764
No 359
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=99.21 E-value=1.7e-10 Score=75.26 Aligned_cols=90 Identities=22% Similarity=0.252 Sum_probs=63.1
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--------eeeeee---------eccCCcEEEcc--C---CcE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--------SEARSI---------IHSGGRYSITT--A---GAL 69 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--------~~~~~~---------~~~~~r~~v~~--~---G~L 69 (114)
..|....+.+|.+|.|.|...+..... .+.|+|... .++... ....+||.+.. + ..|
T Consensus 3 Q~p~~~~~~~G~~vtL~C~~~~~~~~~-~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 81 (115)
T 2atp_B 3 QTPSSLLVQTNHTAKMSCEVKSISKLT-SIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFL 81 (115)
T ss_dssp EECSEEEECTTSCEEEEEECCSSCCSS-EEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEE
T ss_pred cCCCCEEEcCCCcEEEEEEecCCCCcc-cEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEE
Confidence 457888999999999999985432122 799998642 121110 01257998864 2 379
Q ss_pred EEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEE
Q psy9140 70 HIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 70 ~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V 105 (114)
.|++++.+|+| .|.|.+.+. +...-...++|.|
T Consensus 82 ~I~~~~~~DsG-~Y~C~~~~~--~~~~fg~GT~l~V 114 (115)
T 2atp_B 82 SIMNVKPEDSD-FYFCATVGS--PKMVFGTGTKLTV 114 (115)
T ss_dssp EECSCCGGGCE-EEEEEEECS--SCEEECCCEEEEE
T ss_pred EECCCCHHHCE-EEEEeEccC--CcccCCCCEEEEE
Confidence 99999999995 999999863 3444566778876
No 360
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.21 E-value=2.7e-11 Score=91.51 Aligned_cols=89 Identities=9% Similarity=0.007 Sum_probs=64.3
Q ss_pred cceeEEEeCCeEEEEeecCCCCCC--cc-eEEEeeCCeeeeee---eeccCCcEEEc-----------cC--CcEEEeec
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHN--LL-LIAWLREGVSEARS---IIHSGGRYSIT-----------TA--GALHIRDT 74 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~--~~-~vsW~kd~~~~~~~---~~~~~~r~~v~-----------~~--G~L~I~~v 74 (114)
+....+.+|..+.|.|.+.+.... +. .++|.|++..+... ....+++|.+. .+ +.|.|.++
T Consensus 183 ~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 262 (363)
T 1wio_A 183 SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQA 262 (363)
T ss_dssp EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSB
T ss_pred CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccC
Confidence 366778999999999988653211 12 89999999864210 00126777773 33 49999999
Q ss_pred CCCCCCeeeEEEEeec--cCCcEEeCCCeEEEEe
Q psy9140 75 GMEDSYIRYYCQTTHK--LTGERKISPPSQVMVS 106 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~--l~~~~~~s~~a~L~V~ 106 (114)
+.+|+| .|+|.|.|. .+. .+..++|.|.
T Consensus 263 ~~~d~G-~Y~C~a~n~~~~g~---~~~~~~l~V~ 292 (363)
T 1wio_A 263 LPQYAG-SGNLTLALEAKTGK---LHQEVNLVVM 292 (363)
T ss_dssp CGGGCE-EEEEEECBTTTTCC---EEEEEEEEEE
T ss_pred CcCcCc-EEEEEEEEhhhcCe---EEEEEeEEEE
Confidence 999995 999999998 653 4557777776
No 361
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.20 E-value=3.6e-11 Score=82.70 Aligned_cols=79 Identities=10% Similarity=0.047 Sum_probs=56.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeee-eccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSI-IHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~-~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
+...+....+.+|..+.|.|.+.+.+.+ .++|+|++..+.... ...++.+.. .+.|.|.+++.+|+| .|+|.|.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~c~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~g-~YtC~a~ 195 (218)
T 4frw_A 121 SLNPGPALEEGQGLTLAASCTAEGSPAP--SVTWDTEVKGTTSSRSFKHSRSAAV--TSEFHLVPSRSMNGQ-PLTCVVS 195 (218)
T ss_dssp EEEECSCEETTCCSEEEEEEEEEEBSCC--EEEEEESSCCEEEEEEEECSSSEEE--EEEEEECCCGGGTTC-EEEEEEE
T ss_pred eeeeeeeeeeeeccccceeeeccCCcCc--eEEEEECCcccccCceEecCCcEEE--EEEEEEeeCCHHhCe-EEEEEEE
Confidence 3445556677889999999999776544 899999988653211 111222322 357999999999995 9999999
Q ss_pred eccCC
Q psy9140 89 HKLTG 93 (114)
Q Consensus 89 n~l~~ 93 (114)
|..+.
T Consensus 196 N~~g~ 200 (218)
T 4frw_A 196 HPGLL 200 (218)
T ss_dssp CTTCS
T ss_pred eCCCC
Confidence 98654
No 362
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.20 E-value=5e-12 Score=88.52 Aligned_cols=81 Identities=19% Similarity=0.315 Sum_probs=59.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-----eeccCCcEEEccCCcEEEeecCCCCCCee
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-----IIHSGGRYSITTAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-----~~~~~~r~~v~~~G~L~I~~v~~~D~gg~ 82 (114)
+.+.+.+.+..+.+|..+.|.|.+.++.++++.++|+||+..+... ....+++|.+. +.|.|.+++.+|+| .
T Consensus 115 P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~G-~ 191 (213)
T 3mj8_L 115 PSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMAT--SYLTMTADAWKSRN-T 191 (213)
T ss_dssp CEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEE--EEEEEESHHHHSCS-C
T ss_pred CeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEE--EEEEEeHHHcCCCC-E
Confidence 4456666666666899999999997643332389999999875210 01145667663 67999999999995 9
Q ss_pred eEEEEeecc
Q psy9140 83 YYCQTTHKL 91 (114)
Q Consensus 83 Y~C~a~n~l 91 (114)
|+|.|.|..
T Consensus 192 Y~C~a~n~~ 200 (213)
T 3mj8_L 192 FICKVTHGG 200 (213)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEECC
Confidence 999999974
No 363
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.20 E-value=4.2e-11 Score=84.10 Aligned_cols=85 Identities=13% Similarity=0.193 Sum_probs=55.9
Q ss_pred eeEEEeCCeEEEEeec-CCCCCCcceEEEeeCCeeeeeeeeccCCc--EEEccCCc---EEEeecCCCCCCeeeEEEEee
Q psy9140 16 NTFVLRGNIAVLQCNI-PAYNHNLLLIAWLREGVSEARSIIHSGGR--YSITTAGA---LHIRDTGMEDSYIRYYCQTTH 89 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~-~~~~~~~~~vsW~kd~~~~~~~~~~~~~r--~~v~~~G~---L~I~~v~~~D~gg~Y~C~a~n 89 (114)
+..+.+|.++.|.|.+ .+++.+ .+.|.+++...+ ..+.+ .....+|. |.|.+++.+|+| .|+|.|.|
T Consensus 119 ~~~v~~G~~~~l~C~~~~g~P~~--~v~W~~~~~~~~----~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~Y~C~a~n 191 (222)
T 4i0k_A 119 NKDLRPGNMVTITCSSYQGYPEA--EVFWKDGQGVPL----TGNVTTSQMANERGLFDVHSVLRVVLGANG-TYSCLVRN 191 (222)
T ss_dssp -----CCSEEEEEEEEEEEBSCC--EEEEECTTSCBC----CSEEEEEEEECTTSCEEEEEEEEEECCTTC-EEEEEEEE
T ss_pred CceecCCceEEEEEecccccCCC--eEEEEcCCCccC----CCCcceeEEcCCCCeEEEEEEEEEEeCCCC-EEEEEEEC
Confidence 4578899999999998 555444 899999554322 11112 22234554 899999999995 99999999
Q ss_pred ccCCcEEeCCCeEEEEecccc
Q psy9140 90 KLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~~~~~ 110 (114)
.++. .+..+.|.|.+++-
T Consensus 192 ~~g~---~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 192 PVLQ---QDAHGSVTITGQPL 209 (222)
T ss_dssp TTTT---EEEEEEEECCC---
T ss_pred CCCC---CceEEEEEEeCCcc
Confidence 9876 35577888887653
No 364
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.20 E-value=2.3e-11 Score=90.54 Aligned_cols=81 Identities=17% Similarity=0.319 Sum_probs=49.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCC------cEEEeecCCCCCCe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAG------ALHIRDTGMEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G------~L~I~~v~~~D~gg 81 (114)
+.+.+.+.. +.+|.++.|.|.+.++.++++.+.|+|||..+.. ....++....+| .|.|.+++.+|+|
T Consensus 223 P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~---~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G- 296 (327)
T 2wng_A 223 PTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRT---ETASTVTENKDGTYNWMSWLLVNVSAHRDDV- 296 (327)
T ss_dssp CEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEE---EECCSCEECTTSCEEEEEEEEC-------CC-
T ss_pred CEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccC---cccCceEECCCCcEEEEEEEEEccccccCCC-
Confidence 335555444 7799999999999764433237999999997531 112233333333 4899999999995
Q ss_pred eeEEEEeeccCCc
Q psy9140 82 RYYCQTTHKLTGE 94 (114)
Q Consensus 82 ~Y~C~a~n~l~~~ 94 (114)
.|+|.|.|..+.+
T Consensus 297 ~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 297 KLTCQVEHDGQPA 309 (327)
T ss_dssp EEEEEEEETTCCC
T ss_pred EEEEEEEeCCCCC
Confidence 9999999986543
No 365
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.20 E-value=1.2e-10 Score=93.98 Aligned_cols=85 Identities=16% Similarity=0.225 Sum_probs=67.4
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEcc-CCcEEEeecCCCCCCeeeEEEEeeccC
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITT-AGALHIRDTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~-~G~L~I~~v~~~D~gg~Y~C~a~n~l~ 92 (114)
+.+..+.+|.++.|.|.+.+ +.+.+.|+|++..+ ..+.|+.+.. ++.|.|.+++.+|+| .|+|.|.|..+
T Consensus 474 ~~~~~v~~g~~v~l~C~~~~---~~~~i~W~~~g~~l-----~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a~n~~g 544 (642)
T 1e07_A 474 NNSKPVEDKDAVAFTCEPEA---QNTTYLWWVNGQSL-----PVSPRLQLSNGNRTLTLFNVTRNDAR-AYVCGIQNSVS 544 (642)
T ss_pred CCceeecCCCeEEEEEECCC---CCcEEEEEECCEeC-----CCCCcEEEcCCCcEEEEeecChhcCc-eEEEEeEcCCC
Confidence 44667889999999999963 22289999999854 4567888765 569999999999996 99999999876
Q ss_pred CcEEeCCCeEEEEeccc
Q psy9140 93 GERKISPPSQVMVSEIA 109 (114)
Q Consensus 93 ~~~~~s~~a~L~V~~~~ 109 (114)
.. .|..+.|.|..++
T Consensus 545 ~~--~s~~~~l~V~~~p 559 (642)
T 1e07_A 545 AN--RSDPVTLDVLYGP 559 (642)
T ss_pred Cc--cCCCEEEEEEeCC
Confidence 42 4557899998543
No 366
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.20 E-value=5.4e-11 Score=87.37 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=63.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTH 89 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n 89 (114)
+.+.| +..|.+|+++.|.|.+.+. + ..+.|+||+..+.. .+.....++.|.|.+|+.+|+| .|+|.|.|
T Consensus 105 i~~~p-~~~v~~G~~vtL~C~~~~~--~-~~~~w~k~g~~~~~------~~~~~~~~~~l~I~~v~~~d~G-~Y~C~a~n 173 (242)
T 1p6f_A 105 LSVHP-GPEVISGEKVTFYCRLDTA--T-SMFLLLKEGRSSHV------QRGYGKVQAEFPLGPVTTAHRG-TYRCFGSY 173 (242)
T ss_dssp EEEES-CSEEETTCEEEEEEECTTS--C-SEEEEEECSSSCEE------EEEECSSEEEEEEEECCGGGCE-EEEEEEEE
T ss_pred eEccC-CCccCCCCcEEEEEecCCC--C-CEEEEEECCCccCc------cccCCCceEEEEeCCCccccCE-EEEEEEEC
Confidence 44455 5678999999999998642 1 27899999985411 1112234679999999999995 99999998
Q ss_pred ccCCcEEeCCCeEEEEecc
Q psy9140 90 KLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~~~ 108 (114)
........|....|.|+++
T Consensus 174 ~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 174 NNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp ETTEECCCCCCEEEEEEC-
T ss_pred CCCcccCCCCCEEEEEecc
Confidence 6311123577899999864
No 367
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.20 E-value=8.9e-11 Score=84.32 Aligned_cols=95 Identities=19% Similarity=0.319 Sum_probs=63.9
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee---------eccCCcEEEcc-----CCcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI---------IHSGGRYSITT-----AGALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~---------~~~~~r~~v~~-----~G~L~I 71 (114)
...+....+.+|.+|.|.|.+.+...+...+.|+|++ ..+ +... ...++||.+.. ++.|.|
T Consensus 131 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 210 (247)
T 1svz_A 131 LQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQI 210 (247)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEE
T ss_pred EeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEE
Confidence 3444556799999999999996653211279999963 211 1000 01257888753 248999
Q ss_pred eecCCCCCCeeeEEEEeeccCCc--EEeCCCeEEEEe
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGE--RKISPPSQVMVS 106 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~--~~~s~~a~L~V~ 106 (114)
++++.+|+| .|.|.|.|...++ ......++|.|+
T Consensus 211 ~~v~~~DsG-~Y~C~a~n~~~~~~~~~fg~gt~L~V~ 246 (247)
T 1svz_A 211 NNLKNEDTA-TYFCVRDRHDYGEIFTYWGQGTTVTVS 246 (247)
T ss_dssp CSCCGGGCE-EEEEEEEEGGGTEEEEEECCCEEEEEC
T ss_pred CCCChhHCE-EEEEEEeccCCccceeEEcCCEEEEEe
Confidence 999999995 9999999963222 234568888875
No 368
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.20 E-value=4.3e-11 Score=84.74 Aligned_cols=95 Identities=23% Similarity=0.360 Sum_probs=63.9
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee-----------eccCCcEEEcc-----CCcEE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI-----------IHSGGRYSITT-----AGALH 70 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~-----------~~~~~r~~v~~-----~G~L~ 70 (114)
.+|++..+.+|.+|.|.|.+.+...+...+.|+|++ .. ++... ....+||.+.. ++.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 84 (222)
T 1q9r_B 5 VESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQ 84 (222)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred ecCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEE
Confidence 467778999999999999986542111279999853 21 11000 01247998874 34899
Q ss_pred EeecCCCCCCeeeEEEEeeccCCc--EEeCCCeEEEEec
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTGE--RKISPPSQVMVSE 107 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~~--~~~s~~a~L~V~~ 107 (114)
|++|+.+|+| .|.|.+.|..+.. ...+..+.|.|..
T Consensus 85 I~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 122 (222)
T 1q9r_B 85 MNTLRAEDSA-TYYCARDHDGYYERFSYWGQGTLVTVSA 122 (222)
T ss_dssp ECSCCGGGCE-EEEEEECCCSSCCSCCCBCCCEEEEECS
T ss_pred ECcCCcccCe-EEEEEEeccCCcccceEeCCceEEEecc
Confidence 9999999995 9999999964210 0133466888874
No 369
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.19 E-value=3.4e-11 Score=89.15 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=65.1
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCC--cc-eEEEeeCCeeeee--------eeeccCCcEEEc--------cCCcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHN--LL-LIAWLREGVSEAR--------SIIHSGGRYSIT--------TAGALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~--~~-~vsW~kd~~~~~~--------~~~~~~~r~~v~--------~~G~L~I 71 (114)
...|.+..+..|++|.|.|.+.+...+ .. .|+|+|++..... +......|+.+. .+++|.|
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEE
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEE
Confidence 457888899999999999998443222 22 5899999864210 122345677653 2468999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
.+++.+|+| .|+|.+.+...+. .+..+.|.|..++
T Consensus 84 ~~v~~~D~G-~Y~C~v~~~~~~~--~~~~~~l~v~~~P 118 (313)
T 4fqp_A 84 FGLRVEDEG-NYTCLFVTFPQGS--RSVDIWLRVLAKP 118 (313)
T ss_dssp CSCCGGGCE-EEEEEEECSSSCE--EEEEEEECCBBCC
T ss_pred CcCChhhCE-EEEEEEeeccCcc--eeeeeeeeeccCC
Confidence 999999995 9999987543332 4445666665443
No 370
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.19 E-value=2e-10 Score=83.75 Aligned_cols=95 Identities=17% Similarity=0.267 Sum_probs=64.1
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeeee-ec----------cCCcEEEcc----CCcEEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSI-IH----------SGGRYSITT----AGALHI 71 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~-~~----------~~~r~~v~~----~G~L~I 71 (114)
.+...|++..+.+|.+|+|.|.+.+ +...+.|+|. +....... .. .++||.+.. ++.|.|
T Consensus 29 ~v~~~p~~v~v~~G~~v~L~C~~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 105 (270)
T 3qib_D 29 KVIQTPRYLVKGQGQKAKMRCIPEK---GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEI 105 (270)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCT---TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEE
T ss_pred eEEeCCCeEEEcCCCCEEEEEEecC---CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEE
Confidence 4556788899999999999999743 2128999982 21110000 00 012888763 457999
Q ss_pred eecCCCCCCeeeEEEEeeccCC-cEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTG-ERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~~ 107 (114)
++|+.+|+| .|.|.+.+...+ ....+..+.|.|.+
T Consensus 106 ~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 141 (270)
T 3qib_D 106 QSSEAGDSA-LYLCASSLNWSQDTQYFGPGTRLLVLE 141 (270)
T ss_dssp SSCCGGGCE-EEEEEEESCTTCCCCEECCCEEEEEES
T ss_pred CCCCHhHCe-EEEEEEecCCCccceEECCcEEEEEcc
Confidence 999999995 999999974221 22345577888876
No 371
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.19 E-value=6.8e-11 Score=91.72 Aligned_cols=96 Identities=20% Similarity=0.299 Sum_probs=67.2
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeee-e-----------eccCCcEEEcc-----CCcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARS-I-----------IHSGGRYSITT-----AGALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~-~-----------~~~~~r~~v~~-----~G~L~I 71 (114)
..+|+...+.+|++|+|.|.+.+...+...+.|+|++ ..+... . ....+||.+.. ++.|.|
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (444)
T 1igt_B 4 LQESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQM 83 (444)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEE
Confidence 3567788999999999999996543111279999863 221100 0 01347998864 358999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.+|+.+|+| .|+|.|.|..+.....+..++|.|.+
T Consensus 84 ~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (444)
T 1igt_B 84 SRLKSEDTA-MYYCARHGGYYAMDYWGQGTTVTVSS 118 (444)
T ss_dssp CSCCGGGCE-EEEEEEECSSSCEEEEBCCEEEEECS
T ss_pred CCCCHHHCE-EEEEEEecCCcccccccCcEEEEecC
Confidence 999999995 99999999754322455677888874
No 372
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.19 E-value=1.8e-10 Score=82.88 Aligned_cols=94 Identities=17% Similarity=0.238 Sum_probs=64.4
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee-------eccCCcEEEcc----CCcEEEee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI-------IHSGGRYSITT----AGALHIRD 73 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~-------~~~~~r~~v~~----~G~L~I~~ 73 (114)
+...|++..+.+|.+|.|.|.+.. . . ..+.|+|++ .. ++... ....+||.+.. ++.|.|++
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~~-~-~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 78 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQTN-N-H-NNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILEL 78 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEESS-C-C-SEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESS
T ss_pred cccCCCeeEEeCCCcEEEEEEeCC-C-C-ceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEec
Confidence 345688899999999999999842 1 2 289999964 21 11100 01257998853 34899999
Q ss_pred cCCCCCCeeeEEEEeeccC--CcEEeCCCeEEEEec
Q psy9140 74 TGMEDSYIRYYCQTTHKLT--GERKISPPSQVMVSE 107 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~--~~~~~s~~a~L~V~~ 107 (114)
|+.+|+| .|.|.+.|..+ .....+..++|.|..
T Consensus 79 v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 113 (238)
T 1bec_A 79 ATPSQTS-VYFCASGGGRGSYAEQFFGPGTRLTVLE 113 (238)
T ss_dssp CCGGGCE-EEEEEEESCTTCGGGCEECCCEEEEEES
T ss_pred CCcccCE-EEEEEEecCCCCccccccCCCEEEEEec
Confidence 9999995 99999998632 111234566788875
No 373
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=99.19 E-value=2.4e-10 Score=74.87 Aligned_cols=94 Identities=17% Similarity=0.267 Sum_probs=64.0
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee-----eccCCcEEEc--cC---CcEEEeecC
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI-----IHSGGRYSIT--TA---GALHIRDTG 75 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~-----~~~~~r~~v~--~~---G~L~I~~v~ 75 (114)
...|....+.+|.+|.|.|...+....+ .+.|+|.. . .++... ....+||.+. ++ ..|.|++++
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~-~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 82 (116)
T 1fo0_A 4 TQTQTSISVMEKTTVTMDCVYETQDSSY-FLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQ 82 (116)
T ss_dssp ECCCCEEEEETTCCEEECCEECCCCSSC-EEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCC
T ss_pred CcCCCcEEEecCCcEEEEeEecCCCCCe-EEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 4457888999999999999986542111 79999853 2 121111 0125799883 22 269999999
Q ss_pred CCCCCeeeEEEEeecc---CCcEEeCCCeEEEEe
Q psy9140 76 MEDSYIRYYCQTTHKL---TGERKISPPSQVMVS 106 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l---~~~~~~s~~a~L~V~ 106 (114)
.+|+| .|.|.+.+.. .....-...++|.|+
T Consensus 83 ~~DsG-~Y~C~~~~~~~~~~~~~~fg~GT~l~V~ 115 (116)
T 1fo0_A 83 IEDSA-VYFCAMRGDYGGSGNKLIFGTGTLLSVK 115 (116)
T ss_dssp GGGCE-EEEEEEECCCTTCSSCEEECCCEEEEEE
T ss_pred hhhCE-EEEEEEEcCcCCCCceEEECCCcEEEEe
Confidence 99995 9999999731 223345567888886
No 374
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.19 E-value=5.8e-11 Score=87.41 Aligned_cols=83 Identities=11% Similarity=0.129 Sum_probs=59.5
Q ss_pred eeEEEeCCeEEEEeec------CCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe-
Q psy9140 16 NTFVLRGNIAVLQCNI------PAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT- 88 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~------~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~- 88 (114)
+..+.+|.++.|.|.+ .+.+.+ .++|+|++..+. ..+.|+.. .++.|.|.+++.+|+| .|+|.|.
T Consensus 112 ~~~~~~g~~v~l~C~~~~~~~~~g~p~~--~i~W~k~~~~l~----~~~~~~~~-~~~~L~i~~v~~~d~G-~Y~C~a~~ 183 (315)
T 1itb_B 112 KQKLPVAGDGGLVCPYMEFFKNENNELP--KLQWYKDCKPLL----LDNIHFSG-VKDRLIVMNVAEKHRG-NYTCHASY 183 (315)
T ss_dssp EEEEETTSCEEEECSSCTTTCTTTTCCC--CCEEEETTEECC----CCSSSEEE-ETTEEEESSCCGGGCE-EEEEEEEE
T ss_pred ceEEecCCCeEEEEecccccccCCCCCC--EEEEEECCEECC----CccceEee-cCceEEEEeceehhCc-EEEEEEEc
Confidence 4678999999999998 554333 899999998642 23456644 4789999999999995 9999999
Q ss_pred eccCCcEEeCCCeEEEEe
Q psy9140 89 HKLTGERKISPPSQVMVS 106 (114)
Q Consensus 89 n~l~~~~~~s~~a~L~V~ 106 (114)
|..+.....+....|.+.
T Consensus 184 n~~g~~~~~~~~~~~~~~ 201 (315)
T 1itb_B 184 TYLGKQYPITRVIEFITL 201 (315)
T ss_dssp EETTEEEEEEEEEEEEEE
T ss_pred CCCCcEEEEEEEEEEEEe
Confidence 666543222333444343
No 375
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.18 E-value=6.9e-11 Score=90.66 Aligned_cols=95 Identities=15% Similarity=0.234 Sum_probs=67.4
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCC--cceEEEeeCC--eee---eee----eeccCCcEEEccC---CcEEEeecC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHN--LLLIAWLREG--VSE---ARS----IIHSGGRYSITTA---GALHIRDTG 75 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~--~~~vsW~kd~--~~~---~~~----~~~~~~r~~v~~~---G~L~I~~v~ 75 (114)
+...|.+..+.+|+++.|.|.+.+.+.+ ...+.|+|++ ..+ ++. .....+||.+..+ +.|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 5566889999999999999998665432 0279999974 221 000 0112578987643 369999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.+|+| .|+|.|.|..+. ..+..++|.|..
T Consensus 84 ~~D~G-~Y~C~a~n~~~~--~~~~~~~l~V~~ 112 (438)
T 1qgc_4 84 ADDVA-TYYCQQSNEVPL--TFGAGTKLDLKR 112 (438)
T ss_dssp GGGCE-EEEEEECSSTTC--CBCCCEEEEECC
T ss_pred CcCCe-eEEEEEecCCCc--cccCceeEEecC
Confidence 99995 999999997642 235577888864
No 376
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=99.18 E-value=1.7e-10 Score=76.02 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=63.6
Q ss_pred ccceeEEEeCCeEEEEeecCCCCC-CcceEEEeeCC--ee---eeeee----eccCCcEEEccCC---cEEEeecCCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNH-NLLLIAWLREG--VS---EARSI----IHSGGRYSITTAG---ALHIRDTGMEDS 79 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~-~~~~vsW~kd~--~~---~~~~~----~~~~~r~~v~~~G---~L~I~~v~~~D~ 79 (114)
+|....+.+|++|.|.|...+... ....+.|+|.. .. ++... ....+||.+..++ .|.|++++.+|+
T Consensus 6 q~~~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~Ds 85 (120)
T 1oaq_L 6 QESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDE 85 (120)
T ss_dssp ECSEEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred cCCcEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhC
Confidence 344588999999999999865431 11278998853 21 11100 0125799876433 699999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
| .|.|.+.+. +.......++|.|.+..
T Consensus 86 G-~Y~C~~~~~--~~~~fg~gt~L~V~~~~ 112 (120)
T 1oaq_L 86 A-IYFCALWYS--NHLVFGGGTKLTVLGQP 112 (120)
T ss_dssp E-EEEEEEEET--TEEEECCCEEEEECC--
T ss_pred e-EEEEEEccC--CCcEECCCEEEEEcCCC
Confidence 5 999999985 23445668899998654
No 377
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=99.18 E-value=1.4e-10 Score=75.60 Aligned_cols=93 Identities=16% Similarity=0.211 Sum_probs=64.2
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCC---CcceEEEeeCC--e---eeeeee----eccCCcEEEccCC---cEEEeecC
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNH---NLLLIAWLREG--V---SEARSI----IHSGGRYSITTAG---ALHIRDTG 75 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~---~~~~vsW~kd~--~---~~~~~~----~~~~~r~~v~~~G---~L~I~~v~ 75 (114)
...|+...+.+|.+|.|.|.+.+... ....+.|+|.. . .++... ....+||.+..++ .|.|++++
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~ 84 (113)
T 1dlf_L 5 TQTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVE 84 (113)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCC
T ss_pred EEeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCC
Confidence 34578889999999999999855431 11278999853 2 121100 0125799875432 69999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.+|+| .|.|.+.+.. ...-...++|.|+
T Consensus 85 ~~DsG-~Y~C~~~~~~--~~~fg~gT~l~V~ 112 (113)
T 1dlf_L 85 AEDLG-VYFCSQSTHV--PFTFGSGTKLEIK 112 (113)
T ss_dssp GGGCE-EEEEEECSSS--SCEECCCEEEEEC
T ss_pred hHHCE-EEEEEEecCC--CcEECCCEEEEEc
Confidence 99995 9999999852 2235668888885
No 378
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=99.18 E-value=4.6e-10 Score=72.96 Aligned_cols=94 Identities=15% Similarity=0.213 Sum_probs=64.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeeee----eccCCcEEEc--c---CCcEEEeecC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARSI----IHSGGRYSIT--T---AGALHIRDTG 75 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~~----~~~~~r~~v~--~---~G~L~I~~v~ 75 (114)
....|....+.+|.+|.|.|.+.+...+ .+.|+|... .++... ....+||.+. + +..|.|++++
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~--~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~ 80 (112)
T 2z35_A 3 VTQTGGQVALSEEDFLTIHCNYSASGYP--ALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQ 80 (112)
T ss_dssp EECSCSEEEEETTCCEEECCEEECSSCC--EEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCC
T ss_pred eEeCCCcEEEcCCCCEEEEEEECCCCCC--eEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCC
Confidence 3456888899999999999998554222 799998542 121110 1125799884 2 3479999999
Q ss_pred CCCCCeeeEEEEeecc-CCcEEeCCCeEEEEe
Q psy9140 76 MEDSYIRYYCQTTHKL-TGERKISPPSQVMVS 106 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l-~~~~~~s~~a~L~V~ 106 (114)
.+|+| .|.|.+.... .....-...++|.|+
T Consensus 81 ~~DsG-~Y~C~~~~~~~~~~~~fg~GT~l~V~ 111 (112)
T 2z35_A 81 ESDSA-VYYCALSENYGNEKITFGAGTKLTIK 111 (112)
T ss_dssp STTCS-EEEEEEECTTTTCCEEECCCEEEEEE
T ss_pred hhhCE-EEEEEEEcCCCCceeEECCCEEEEEe
Confidence 99996 9999998311 123344567788876
No 379
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.18 E-value=2.2e-11 Score=88.67 Aligned_cols=85 Identities=14% Similarity=0.162 Sum_probs=57.7
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC----CcEEEeecCCCCCCeeeEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA----GALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~----G~L~I~~v~~~D~gg~Y~C 85 (114)
+.....+..|.+|+++.|.|.+.+ .++|+|++..+ +.|+....+ +.|.|.+++.+|+| .|+|
T Consensus 3 i~~~~~~~~v~~G~~v~L~C~~~~------~v~W~~~~~~~-------~~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C 68 (289)
T 3mjg_X 3 VTPPGPELVLNVSSTFVLTCSGSA------PVVWERMSQEP-------PQEMAKAQDGTFSSVLTLTNLTGLDTG-EYFC 68 (289)
T ss_dssp BCSSCSEEECCTTCCEEEEEEESS------CCEEEBTTBCC-------SEEEEECTTSCEEEEEEECSCCGGGCE-EEEE
T ss_pred ecCCCCeEEEeCCCcEEEEEeccc------eEEEECCCCCc-------ccceeccCCCceeEEEEEccCChhhCE-EEEE
Confidence 344556677889999999999865 27999999853 245555443 47999999999995 9999
Q ss_pred EEeeccCCcEEeCCCeEEEEecc
Q psy9140 86 QTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 86 ~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|.|..+.....+....|.|.+|
T Consensus 69 ~a~n~~g~~~~~~~~~~v~v~~p 91 (289)
T 3mjg_X 69 THNDSRGLETDERKRLYIFVPDP 91 (289)
T ss_dssp ECCC------CCCEEEEEECCCT
T ss_pred EEcccCCCCcCcEEeEEEEEECC
Confidence 99998743222233445555543
No 380
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.18 E-value=7.7e-11 Score=84.36 Aligned_cols=95 Identities=16% Similarity=0.279 Sum_probs=65.3
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCc--ceEEEeeCC--ee---eeeee--------eccCCcEEEcc-----CCcEEE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNL--LLIAWLREG--VS---EARSI--------IHSGGRYSITT-----AGALHI 71 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~--~~vsW~kd~--~~---~~~~~--------~~~~~r~~v~~-----~G~L~I 71 (114)
.+|++..+.+|.+|.|.|.+.+.+... ..+.|+|++ .. ++... ....+||.+.. ++.|.|
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (228)
T 3bae_H 5 KESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKI 84 (228)
T ss_dssp EEECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEE
T ss_pred eCCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEE
Confidence 457888999999999999996543211 279999853 22 11100 01247998863 368999
Q ss_pred eecCCCCCCeeeEEEEeeccCC-----c-EEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTG-----E-RKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~-----~-~~~s~~a~L~V~~ 107 (114)
++|+.+|+| .|.|.+.|..++ . ...+..++|.|..
T Consensus 85 ~~v~~~D~G-~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~ 125 (228)
T 3bae_H 85 TSVDTADTA-TYYCARRGFYGRKYEVNHFDYWGQGTTLTVSS 125 (228)
T ss_dssp CSCCGGGCE-EEEEEEEEESTTCTTSEEEEEECCCEEEEECS
T ss_pred cCCCcccCE-EEEEEEecCCCccccccceeeeCCcEEEEecC
Confidence 999999995 999999996431 1 1234568888874
No 381
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.17 E-value=6.5e-11 Score=86.50 Aligned_cols=76 Identities=9% Similarity=0.100 Sum_probs=59.6
Q ss_pred ccceeeccc-eeEEEeCCeEEEEeecC-CCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCc-----EEEeecCCCCC
Q psy9140 7 SSDYEINTG-NTFVLRGNIAVLQCNIP-AYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGA-----LHIRDTGMEDS 79 (114)
Q Consensus 7 ~~~~~v~~~-d~~v~~G~~AvL~C~~~-~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~-----L~I~~v~~~D~ 79 (114)
.+.+...+. +..+.+|.++.|.|.+. +.+.+ .++|+|++..+ ..+.||.+..++. |.|.+++.+|+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~--~v~W~~~~~~i-----~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 178 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNA--KVNYIFNEKEI-----FEGPKYKMHIDRNTGIIEMFMEKLQDEDE 178 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSC--EEEEEETTEEE-----CSSSSCEEEEETTTTEEEEEESCCCGGGC
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCC--EEEEEECCEEC-----eeCCcEEEEEccCCCEEEEEEccCCcccC
Confidence 344555554 88899999999999997 54433 89999999854 4567888775443 99999999999
Q ss_pred CeeeEEEEeec
Q psy9140 80 YIRYYCQTTHK 90 (114)
Q Consensus 80 gg~Y~C~a~n~ 90 (114)
| .|+|.|.|.
T Consensus 179 G-~Y~C~~~~~ 188 (312)
T 2y23_A 179 G-TYTFQLQDG 188 (312)
T ss_dssp E-EEEEEEESS
T ss_pred E-eEEEEEEeC
Confidence 5 999999874
No 382
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.17 E-value=8.9e-11 Score=87.44 Aligned_cols=100 Identities=18% Similarity=0.287 Sum_probs=68.3
Q ss_pred ccceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee---------eccCCcEEEcc-----CC
Q psy9140 7 SSDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI---------IHSGGRYSITT-----AG 67 (114)
Q Consensus 7 ~~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~---------~~~~~r~~v~~-----~G 67 (114)
.+....+|....+.+|++|.|.|.+.+.......+.|+|++ .. ++... ....+||.+.. ++
T Consensus 22 ~~~~v~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 101 (291)
T 2gki_A 22 REVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTA 101 (291)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEE
T ss_pred ccEEEEcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEE
Confidence 34556678889999999999999986543111279999963 21 11100 11247888753 35
Q ss_pred cEEEeecCCCCCCeeeEEEEeeccCC--cEEeCCCeEEEEec
Q psy9140 68 ALHIRDTGMEDSYIRYYCQTTHKLTG--ERKISPPSQVMVSE 107 (114)
Q Consensus 68 ~L~I~~v~~~D~gg~Y~C~a~n~l~~--~~~~s~~a~L~V~~ 107 (114)
.|.|.+++.+|+| .|.|.+.|...+ ....+..++|.|..
T Consensus 102 sL~I~~v~~~DsG-~Y~C~~~~~~~g~~~~~~~~~~~L~V~~ 142 (291)
T 2gki_A 102 YMELSSLTSEDSA-VYYCARGAYKRGYAMDYWGQGTSVTVSS 142 (291)
T ss_dssp EEEECSCCGGGCE-EEEEEEECGGGTTCEEEECCCEEEEECC
T ss_pred EEEECcCCHHHCE-EEEEEEeccccccccceeCCCcEEEEec
Confidence 7999999999995 999999997422 22334577888887
No 383
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.17 E-value=4.9e-11 Score=85.56 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=62.1
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCC--cc-eEEEeeCCeeeee---eeeccCCcEEEc-------------cCCcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHN--LL-LIAWLREGVSEAR---SIIHSGGRYSIT-------------TAGALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~--~~-~vsW~kd~~~~~~---~~~~~~~r~~v~-------------~~G~L~I~ 72 (114)
..|.+..+.+|++|.|.|.+.+.+.+ .. .+.|+|++..... .....+++.... .++.|.|.
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 45667789999999999998543322 11 5999997432100 000011111111 23459999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+|+.+|+| .|+|.+.|..+ ..+..+.|.|..++.+
T Consensus 88 ~v~~~D~G-~Y~C~~~~~~~---~~~~~~~L~V~~~P~v 122 (248)
T 3pv7_A 88 GIQLEEAG-EYRCEVVVTPL---KAQGTVQLEVVASPAS 122 (248)
T ss_dssp SCCGGGCE-EEEEEEEETTE---EEEEEEEEEEEBCCEE
T ss_pred CCCHHHCe-EEEEEEEeCCc---cceeEEEEEEecCCce
Confidence 99999995 99999999643 2455778888876543
No 384
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=99.17 E-value=2.5e-10 Score=76.59 Aligned_cols=100 Identities=16% Similarity=0.132 Sum_probs=68.4
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee----eccCCcEEEcc---CCcEEEeecCCCC
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI----IHSGGRYSITT---AGALHIRDTGMED 78 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~----~~~~~r~~v~~---~G~L~I~~v~~~D 78 (114)
..+|....+.+|.+|.|.|...+.......+.|+|.. . .++... ....+||.+.. +..|.|++++.+|
T Consensus 4 v~Qp~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~D 83 (123)
T 3t0v_A 4 LTQSPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASLAISGLRSED 83 (123)
T ss_dssp BEECCCEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred cCccCeEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEEEECCCCHHH
Confidence 3457788999999999999985532111278999842 2 122110 01247998753 3479999999999
Q ss_pred CCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 79 SYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+| .|.|.+.+.......-...++|.|++..+.
T Consensus 84 sG-~Y~C~~~~~~~~~~~fG~GT~l~V~~~~~~ 115 (123)
T 3t0v_A 84 EA-DYYCLSWDDSLNGWVFGGGTKVTVLDAASG 115 (123)
T ss_dssp CE-EEEEEEEETTTTEEEEBCCEEEEECCCC--
T ss_pred CE-EEEEEEEcCCCCceEECCCEEEEEccCCCC
Confidence 95 999999985322345677899999987653
No 385
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.17 E-value=1.4e-10 Score=84.12 Aligned_cols=99 Identities=20% Similarity=0.262 Sum_probs=67.7
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--eeeeee-------eccCCcEEEcc-----CCcEEEeec
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--SEARSI-------IHSGGRYSITT-----AGALHIRDT 74 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~~~~~~-------~~~~~r~~v~~-----~G~L~I~~v 74 (114)
.+...|.+..+.+|++|.|.|.+.+.... ..+.|+|++. .+.... ....+||.+.. ++.|.|.++
T Consensus 138 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 216 (259)
T 3omz_A 138 KVTQAQSSVSMPVRKAVTLNCLYETSWWS-YYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISAL 216 (259)
T ss_dssp EEECCCCCEEEETTCCEEECCEEECCCSS-CEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSC
T ss_pred eeEEeCCEEEEcCCCCEEEEEECCCccCC-ceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCC
Confidence 45667788899999999999987542112 2899998532 111000 01257998873 345999999
Q ss_pred CCCCCCeeeEEEEeecc--CCcEEeCCCeEEEEeccc
Q psy9140 75 GMEDSYIRYYCQTTHKL--TGERKISPPSQVMVSEIA 109 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l--~~~~~~s~~a~L~V~~~~ 109 (114)
+.+|+| .|.|.+.+.. .++......++|.|++..
T Consensus 217 ~~~DsG-~Y~C~~~~~~~~~~~~~fg~GT~l~v~~~~ 252 (259)
T 3omz_A 217 QLEDSA-KYFCALGESLTRADKLIFGKGTRVTVEPRS 252 (259)
T ss_dssp CGGGCS-EEEEEEESCSSTTCCCEECCCEEEEEEC--
T ss_pred ChhHCE-EEEEEEeCccCCCCceEECCCCEEEEeeCc
Confidence 999996 9999998531 234456678899998654
No 386
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.17 E-value=1.7e-11 Score=79.58 Aligned_cols=90 Identities=16% Similarity=0.237 Sum_probs=62.1
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc-cCCcEEEeecCCCCCCeeeEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT-TAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~-~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
+.+.+.|.. .|.+|++++|.|.+++. + ....|+|++..+. .+|+... .+..|.|.+|+.+|+| .|+|.
T Consensus 6 P~i~~~p~~-~v~~G~~VtL~C~~~~~--~-~~~~w~k~g~~~~------~~~~~~~~~~~~l~I~~v~~~dsG-~Y~C~ 74 (105)
T 2vsd_A 6 PSLSLHPSQ-GVSLGDTVTLRCHLPRM--A-AWVQLWLNGTLRF------DKEKDKEQDAAEFSFAVTNLEDAG-TYQCR 74 (105)
T ss_dssp CEEEEESCS-SCCTTCEEEEEEECCSS--C-EEEEEEETTEEEE------EEEECTTCSEEEEEEECCSGGGCE-EEEEE
T ss_pred CEEEeCCCC-CcCcCCCEEEEEEcCCC--C-cEEEEEECCccce------eeeccCCCCEEEEEECCCCHHHCe-EEEEE
Confidence 446677766 78999999999998653 1 2678999987531 1222211 2347999999999995 99999
Q ss_pred EeeccCC-cEEeCCCeEEEEecc
Q psy9140 87 TTHKLTG-ERKISPPSQVMVSEI 108 (114)
Q Consensus 87 a~n~l~~-~~~~s~~a~L~V~~~ 108 (114)
+.|.... ....|.+..|.|...
T Consensus 75 ~~n~~~~~~s~~Sdpl~L~V~~~ 97 (105)
T 2vsd_A 75 YQVSEPLWTSNQSDPVELVLTIE 97 (105)
T ss_dssp EEEETTEEECCCCCCEEECCC--
T ss_pred EEcCCCCcccCCCCCEEEEEEEe
Confidence 9996310 113577888888753
No 387
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.16 E-value=1e-10 Score=89.68 Aligned_cols=97 Identities=20% Similarity=0.289 Sum_probs=66.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeeee------------eccCCcEEEccC-----CcEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSI------------IHSGGRYSITTA-----GALH 70 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~------------~~~~~r~~v~~~-----G~L~ 70 (114)
+...|.+..+.+|.+|.|.|.+.+.+.+...+.|+|+ +..+.... ....+||.+..+ +.|.
T Consensus 221 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 300 (438)
T 1qgc_4 221 MLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQ 300 (438)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEE
T ss_pred EEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEE
Confidence 4456778889999999999999765421227999997 44321100 013579988753 3899
Q ss_pred EeecCCCCCCeeeEEEEeeccCC--cEEeCCCeEEEEec
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTG--ERKISPPSQVMVSE 107 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~--~~~~s~~a~L~V~~ 107 (114)
|.+++.+|+| .|+|.|.|..++ ....+..+.|.|..
T Consensus 301 I~~v~~~D~G-~Y~C~a~n~~~~~~~~~~~~~~~l~V~~ 338 (438)
T 1qgc_4 301 MSSLRSADTA-MYYCVRREDGGDEGFAYWGQGTVVTVSA 338 (438)
T ss_dssp ECSCCGGGCC-EEEEEECCSSSCCCCCSBCCCEEEEECS
T ss_pred ECCCChhhCE-EEEEEEEccCCCccceeeCCCEEEEEec
Confidence 9999999995 999999995431 11133467888873
No 388
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.16 E-value=5.3e-11 Score=82.66 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=50.9
Q ss_pred eCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCc---EEEeecCCCCCCeeeEEEEeeccC
Q psy9140 21 RGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGA---LHIRDTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 21 ~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~---L~I~~v~~~D~gg~Y~C~a~n~l~ 92 (114)
+|..+.|.|.+.++.++ +.+.|+|++..+ ..++||.+..+|. |.|.+++.+|+| .|+|.|.|..+
T Consensus 16 ~~~~~~l~C~~~~~~p~-~~i~W~~~g~~i-----~~~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~~~n~~~ 83 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVED-LKVNWSHNGSAI-----RYSDRVKTGVTGEQIWLQINEPTPNDKG-KYVMELFDGKT 83 (212)
T ss_dssp CSSEEEEEEEBSSCCSS-CEEEEEETTEEC-----CCCSSEEEEEETTEEEEEEESCCGGGCE-EEEEEEECSSC
T ss_pred cCceEEEEEEEeccCCC-ceEEEEECCEEc-----cCCCeEEEEEeCCEEEEEECCCCcccCE-EEEEEEecCCc
Confidence 67788888888765322 289999999854 4568888765554 999999999995 99999999654
No 389
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.16 E-value=4.2e-11 Score=84.07 Aligned_cols=89 Identities=15% Similarity=0.154 Sum_probs=62.5
Q ss_pred ceeEEEeCCeEEEEeecCCCCC--Cc-ceEEEeeCCeeeeee--------eeccCCcEEEcc------CCcEEEeecCCC
Q psy9140 15 GNTFVLRGNIAVLQCNIPAYNH--NL-LLIAWLREGVSEARS--------IIHSGGRYSITT------AGALHIRDTGME 77 (114)
Q Consensus 15 ~d~~v~~G~~AvL~C~~~~~~~--~~-~~vsW~kd~~~~~~~--------~~~~~~r~~v~~------~G~L~I~~v~~~ 77 (114)
+...+.+|+++.|.|.+.+.+. .. ..+.|+|++...... .....+|+.+.. ++.|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3456789999999999865431 11 289999987543110 112357888876 688999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|+| .|+|.+.|.-. .+....|.|..+
T Consensus 83 D~G-~Y~C~~~~~~~----~~~~~~l~V~~~ 108 (222)
T 4i0k_A 83 DEG-SYTCFVSIQDF----DSAAVSLQVAAP 108 (222)
T ss_dssp GCS-CEEEEEEECCC----CCCCCCCCCCBC
T ss_pred cCE-EEEEEEEeCCC----ceEEEEEEEEcC
Confidence 996 99999998521 344566666644
No 390
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=99.16 E-value=6.2e-11 Score=77.16 Aligned_cols=88 Identities=20% Similarity=0.364 Sum_probs=59.0
Q ss_pred ccceeEEEeCCeEEEEeecC-CCCCCcceEEEeeCC--e---eeeeee--e-------cc-CCcEEEccCC---cEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIP-AYNHNLLLIAWLREG--V---SEARSI--I-------HS-GGRYSITTAG---ALHIRD 73 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~-~~~~~~~~vsW~kd~--~---~~~~~~--~-------~~-~~r~~v~~~G---~L~I~~ 73 (114)
.|....+.+|.+|.|.|.+. +...+ .+.|+|.. . .++... . .. .+||.+..++ .|.|++
T Consensus 5 ~p~~~~~~~G~~v~L~C~~~~~~~~~--~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~ 82 (111)
T 2qhl_A 5 ELHVKTVKRGENVTMECSMSKVKDKD--KLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIG 82 (111)
T ss_dssp BCEEEECCTTCCEEECCBCTTCSCGG--GEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESS
T ss_pred CCceEEEeCCCCEEEEEEccCCcccc--eEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECC
Confidence 46778899999999999985 44222 79999853 1 222100 0 01 6899886433 699999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEE
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V 105 (114)
++.+|+| .|.|.+.+. ....-...++|.|
T Consensus 83 ~~~~DsG-~Y~C~~~~~--~~~~fg~GT~l~V 111 (111)
T 2qhl_A 83 TREDDGG-EYFCGEVEG--NTIKFTSGTRLQF 111 (111)
T ss_dssp CCGGGCE-EEEEEEEET--TEEEEEEEEEEEC
T ss_pred CChhHCE-EEEEEEccC--CeeEEcCceEEeC
Confidence 9999995 999999984 2222333445543
No 391
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.16 E-value=8.8e-11 Score=82.09 Aligned_cols=61 Identities=21% Similarity=0.388 Sum_probs=48.7
Q ss_pred eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEee-cCCCCCCeeeEEEEeeccCC
Q psy9140 17 TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRD-TGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 17 ~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~-v~~~D~gg~Y~C~a~n~l~~ 93 (114)
..+.+|+++.|.|.+.+ .+ .+.|+||+..+ ..+ .++.|.|.+ ++.+|+| .|+|.|.|..+.
T Consensus 9 ~v~~~G~~v~L~C~~~~--~~--~i~W~k~g~~l-----~~~------~~~~L~I~~~~~~~D~G-~Y~C~a~n~~g~ 70 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS--DE--NLKWEKNGQEL-----PQK------HDKHLVLQDFSEVEDSG-YYVCYTPASNKN 70 (186)
T ss_dssp EEEEETTEEEEECSSCC--CT--TCEEEETTEEE-----CSC------CCSEEEEESCCTTTSCE-EEEEECSSCCCC
T ss_pred EEEeCCcEEEEEEeCCC--CC--ceEEEECCEEC-----CCC------CCCEEEECCCCccccCE-EEEEEEEeCCCc
Confidence 34578999999999965 23 48999999864 111 367899999 9999995 999999998654
No 392
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.16 E-value=2.2e-11 Score=98.63 Aligned_cols=88 Identities=15% Similarity=0.179 Sum_probs=62.1
Q ss_pred ccceeEEEeCCeEEEEeecC-CCCCCcceEEEeeCCeeeeeeee-----ccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 13 NTGNTFVLRGNIAVLQCNIP-AYNHNLLLIAWLREGVSEARSII-----HSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~-~~~~~~~~vsW~kd~~~~~~~~~-----~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
.|.+..+.+|.++.|.|.+. +.+.+ .++|+|++..+..... ..+.+. ...++.|.|.+|+.+|+| .|+|.
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~p--~i~W~k~g~~l~~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~DsG-~Y~C~ 308 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGF--GLTWELENKALEEGNYFEMSTYSTNRT-MIRILFAFVSSVARNDTG-YYTCS 308 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSCC--CEEEECSSSCCCGGGEEEEEEEETTTE-EEEEEEEEESSCCGGGCE-EEEEE
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCe--EEEEEECCEECCCCceeeeeeeccCcc-eeeEEEEEEccCCcccCe-EEEEE
Confidence 67788999999999999995 54333 8999999986421100 001121 223577999999999995 99999
Q ss_pred EeeccCCcEEeCCCeEEEEecccc
Q psy9140 87 TTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 87 a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.|. .+..+.|.|.+++.
T Consensus 309 a~N~------~~~~~~L~V~~~p~ 326 (527)
T 3qs9_E 309 SSKH------PSQSALVTIVEKGF 326 (527)
T ss_dssp ETTE------EEEEEEEEEC--CE
T ss_pred EEeC------CCceEEEEEEccCc
Confidence 9997 35567888876553
No 393
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.16 E-value=8.1e-11 Score=80.91 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=53.6
Q ss_pred eeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeee---------eccCCcEEEc----cCCc--EEEeecCCCCCC
Q psy9140 16 NTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSI---------IHSGGRYSIT----TAGA--LHIRDTGMEDSY 80 (114)
Q Consensus 16 d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~---------~~~~~r~~v~----~~G~--L~I~~v~~~D~g 80 (114)
...+.+|.++.|.|.+.+.+.+ .+.|+|++..++... ....+|+.+. .+|. |.|.+++.+|+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G 81 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSI--QFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSD 81 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCC--CEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCE
T ss_pred cEEEeCCCCEEEEEEEcCCCce--EEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCE
Confidence 4578899999999998754333 899999987432110 1125677765 3454 999999999995
Q ss_pred eeeEEEEeecc
Q psy9140 81 IRYYCQTTHKL 91 (114)
Q Consensus 81 g~Y~C~a~n~l 91 (114)
.|+|.+.|..
T Consensus 82 -~Y~C~~~~~~ 91 (184)
T 2ny1_B 82 -TYICEVEDQK 91 (184)
T ss_dssp -EEEEEETTEE
T ss_pred -EEEEEEEcCC
Confidence 9999999863
No 394
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.16 E-value=1.8e-11 Score=94.58 Aligned_cols=74 Identities=14% Similarity=0.090 Sum_probs=59.6
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCC
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
|++..+.+|.++.|.|.+.+.+.+ .++|+||+.. ++++|.+. +++.+|+| .|+|.|.|.++.
T Consensus 377 p~~~~~~~g~~~~l~C~~~g~P~p--~i~W~~~g~~-------------~~~~g~~~--~v~~~d~G-~Y~C~a~N~~G~ 438 (450)
T 1z7z_I 377 PGNWTWPENSQQTPMCQAWGNPLP--ELKCLKDGTF-------------PLPIGESV--TVTRDLEG-TYLCRARSTQGE 438 (450)
T ss_dssp CSEEEEETTCEECCCCCCEEESCC--EEEEEETTTE-------------ECCTTSCE--ECCGGGCE-EEEEEEEETTEE
T ss_pred CCceeEcCCCeEEEEEecccCCCC--cEEEEECCcc-------------cCCCCCeE--eEehhhCe-EEEEEEEeCCCc
Confidence 378899999999999999776555 8999999873 23456655 79999995 999999999764
Q ss_pred cEEeCCCeEEEEecc
Q psy9140 94 ERKISPPSQVMVSEI 108 (114)
Q Consensus 94 ~~~~s~~a~L~V~~~ 108 (114)
.+..+.|.|..|
T Consensus 439 ---~~~~~~l~V~~~ 450 (450)
T 1z7z_I 439 ---VTREVTVNVLSP 450 (450)
T ss_dssp ---EEEEEEEEEECC
T ss_pred ---eeEEEEEEEEcC
Confidence 566889998764
No 395
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.15 E-value=4.2e-11 Score=83.72 Aligned_cols=60 Identities=17% Similarity=0.368 Sum_probs=48.0
Q ss_pred EEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCC
Q psy9140 19 VLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 19 v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
+.+|.++.|.|.+| .+ .++|+||+..+ ....+ .++.|.|.+++.+|+| .|+|.|.|..+.
T Consensus 119 ~~~G~~v~l~C~~p---~p--~i~W~k~g~~i-----~~~~~----~~~~L~i~~v~~~D~G-~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 119 SRGDGSVLLTCGLT---DK--TIKWLKDGSII-----SPLNA----TKNTWNLGNNAKDPRG-TYQCQGAKETSN 178 (186)
T ss_dssp CSSSCEEEEECSSS---CS--CEEEEETTEEC-----CCSSC----CSSCCEEEETTSCCEE-EEEEEESSCEEE
T ss_pred cCCCCeEEEEeeCC---CC--eEEEEECCEEC-----cccCC----CcceEEECCCCcCcCE-EEEEEEEcCcCC
Confidence 34999999999983 23 79999999864 12222 4789999999999995 999999998753
No 396
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.15 E-value=1.4e-10 Score=83.67 Aligned_cols=94 Identities=19% Similarity=0.174 Sum_probs=63.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eeeeee-ee----------ccCCcEEEcc-----CCcEEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSEARS-II----------HSGGRYSITT-----AGALHI 71 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~~~~-~~----------~~~~r~~v~~-----~G~L~I 71 (114)
+...+.+..+.+|.+|.|.|.+.+.+.+...+.|+|++ ..+... .. ..++||.+.. .+.|.|
T Consensus 125 ~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I 204 (242)
T 2znx_A 125 QLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDL 204 (242)
T ss_dssp EEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEE
T ss_pred eeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEE
Confidence 34455566799999999999996543111279999953 221100 00 1267898863 248999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.+++.+|+| .|+|.|.|.+. ....++|.|...
T Consensus 205 ~~v~~~D~G-~Y~C~a~~~~~----fG~gt~l~v~~~ 236 (242)
T 2znx_A 205 NSVTTEDTA-TYYCANXDGDY----XGQGTLVTVSAA 236 (242)
T ss_dssp CSCCGGGCE-EEEEEETTSSC----BCCCEEEEECCC
T ss_pred CCCCcCcCE-EEEEeccCCcc----cCCCeEEEEEec
Confidence 999999995 99999998531 355778887653
No 397
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.15 E-value=4.2e-11 Score=83.32 Aligned_cols=78 Identities=13% Similarity=0.078 Sum_probs=54.9
Q ss_pred EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCc---EEEeecCCCCCCeeeEEEEeeccCCc
Q psy9140 18 FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGA---LHIRDTGMEDSYIRYYCQTTHKLTGE 94 (114)
Q Consensus 18 ~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~---L~I~~v~~~D~gg~Y~C~a~n~l~~~ 94 (114)
.+.+|.++.|.|.+.+++.+ .+.|+|++..+. .++....+|. |.|.+++.+|+| .|+|.|.|.++.
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p--~v~W~~~~~~~~-------~~~~~~~~~~~~~~~i~~v~~~d~G-~Y~C~a~N~~g~- 182 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLA--EVSWQNVSVPAN-------TSHIRTPEGLYQVTSVLRLKPQPSR-NFSCMFWNAHMK- 182 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCC--EEEETTCCSCCE-------EEEEECTTSCEEEEEEEEECCCTTC-CEEEEEEETTTT-
T ss_pred ecCCCCeEEEEEEccccCCc--eEEEEeCCCCcc-------CceeeCCCCCEEEEEEEEEEcCCCC-EEEEEEEcCCcc-
Confidence 45689999999999776554 899999887531 2233333443 457799999995 999999999876
Q ss_pred EEeCCCeEEEEecc
Q psy9140 95 RKISPPSQVMVSEI 108 (114)
Q Consensus 95 ~~~s~~a~L~V~~~ 108 (114)
.+..+.|.|.++
T Consensus 183 --~~~~~~l~v~~~ 194 (202)
T 3bp6_B 183 --ELTSAIIDPLSR 194 (202)
T ss_dssp --EEEEEEECC---
T ss_pred --cccEEEEEecCc
Confidence 344566766554
No 398
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=99.14 E-value=2.9e-10 Score=76.04 Aligned_cols=97 Identities=22% Similarity=0.287 Sum_probs=64.8
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--eeeeeeeccCCcEEEc-----cCCcEEEeecCCCCCCeee
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--SEARSIIHSGGRYSIT-----TAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~~~~~~~~~~~r~~v~-----~~G~L~I~~v~~~D~gg~Y 83 (114)
...|....+.+|.+|.|.|.+.+...+...+.|+|... .... ....++||.+. .+..|.|++++.+|+| .|
T Consensus 4 ~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~-~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG-~Y 81 (121)
T 2i24_N 4 DQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEE-SISDGGRYVETVNRGSKSFSLRINDLTVKDSG-TY 81 (121)
T ss_dssp EEECSEEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCE-EECSBTTEEEEEETTTTEEEEEECSCCGGGCE-EE
T ss_pred EECCcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCcee-eEecCCCeEEEecCCCCEEEEEECCCChhhCE-EE
Confidence 45588889999999999999854321212789998642 1100 12346899763 1347999999999995 99
Q ss_pred EEEEeeccC--------CcEEeCCCeEEEEeccc
Q psy9140 84 YCQTTHKLT--------GERKISPPSQVMVSEIA 109 (114)
Q Consensus 84 ~C~a~n~l~--------~~~~~s~~a~L~V~~~~ 109 (114)
.|.+....+ ....-...++|.|++..
T Consensus 82 ~C~~~~~~~~~~~~~~~~~~~fG~GT~l~v~~~~ 115 (121)
T 2i24_N 82 RCKPESRYGSYDAVCAALNDQYGGGTVVTVNAAA 115 (121)
T ss_dssp EEEEEESSGGGCHHHHHHTTCCCCCEEEEEECC-
T ss_pred EEEEecCCccccccccceeeEECCCeEEEEcccc
Confidence 999985211 01123457889888654
No 399
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.14 E-value=6.3e-11 Score=83.01 Aligned_cols=82 Identities=10% Similarity=0.169 Sum_probs=54.2
Q ss_pred EEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcE--EEccCCcEEEe---ecCCCCCCeeeEEEEeeccC
Q psy9140 18 FVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRY--SITTAGALHIR---DTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 18 ~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~--~v~~~G~L~I~---~v~~~D~gg~Y~C~a~n~l~ 92 (114)
.+.+|..+.|.|.+.+++.+ .++|.++++..+ ....+. ....+|.+.+. .++.+|.| .|+|.|.|.++
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p--~i~W~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g-~Y~C~a~n~~g 199 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKA--EVIWTSSDHQVL----SGKTTTTNSKREEKLFNVTSTLRINTTTNE-IFYCTFRRLDP 199 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCC--EEEEEETTCCEE----CCEEEEEECC----CEEEEEEEEEECCTTC-EEEEEEEETTT
T ss_pred eecCCCcEEEEEEecCCCCC--eEEEEECCCcee----cCccceEEEcCCCCCEEEEEEEEEeccCCc-EEEEEEEeCcc
Confidence 57789999999999776544 899999944322 122222 22334554444 56778985 99999999987
Q ss_pred CcEEeCCCeEEEEeccc
Q psy9140 93 GERKISPPSQVMVSEIA 109 (114)
Q Consensus 93 ~~~~~s~~a~L~V~~~~ 109 (114)
. .+..+.|.|.+++
T Consensus 200 ~---~~~~~~l~v~~~p 213 (222)
T 3sbw_C 200 E---ENHTAELVIPELP 213 (222)
T ss_dssp T---EEEEEEEECCCC-
T ss_pred c---eeeEEEEEecCCc
Confidence 5 3557788887544
No 400
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.14 E-value=1.4e-11 Score=86.39 Aligned_cols=81 Identities=19% Similarity=0.299 Sum_probs=55.2
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSY 80 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~g 80 (114)
+.+.+.+....+.+|+++.|.|.+.++.++++.++|+||+..+... ....++.|.+. ..|.|.+++.+|+|
T Consensus 112 P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~G 189 (210)
T 1lk3_L 112 PTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMS--STLSLTKADYESHN 189 (210)
T ss_dssp CEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEE--EEEEEEHHHHHTCC
T ss_pred CeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEE--EEEEEChHHhccCC
Confidence 3445545444456899999999996543222279999999865211 01123444433 47999999999995
Q ss_pred eeeEEEEeecc
Q psy9140 81 IRYYCQTTHKL 91 (114)
Q Consensus 81 g~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 190 -~Y~C~a~n~~ 199 (210)
T 1lk3_L 190 -LYTCEVVHKT 199 (210)
T ss_dssp -EEEEEEECTT
T ss_pred -cEEEEEEecC
Confidence 9999999974
No 401
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=99.14 E-value=5.5e-11 Score=77.46 Aligned_cols=92 Identities=16% Similarity=0.122 Sum_probs=60.1
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC-------eeeeee-----eeccCCcEEEcc-----CCcEEEeecC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG-------VSEARS-----IIHSGGRYSITT-----AGALHIRDTG 75 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~-------~~~~~~-----~~~~~~r~~v~~-----~G~L~I~~v~ 75 (114)
.|....+.+|.+|.|.|...........+.|.|.. ..+++. .....+||.+.. +.+|.|+|++
T Consensus 3 sp~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 82 (115)
T 2or7_A 3 SHTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTV 82 (115)
T ss_dssp ---CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCC
T ss_pred CccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCC
Confidence 46778899999999999984321111178999985 233221 112467998642 3579999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.+|+| .|.|.+.+.... .....+|.|..+
T Consensus 83 ~~DsG-~Y~C~v~~~~~~---~~~~v~L~V~~~ 111 (115)
T 2or7_A 83 VGDGG-PYCCVVEIPGAF---HFVDYMLEVKPE 111 (115)
T ss_dssp GGGCE-EEEEEECCTTSC---EEEEEEEEEESC
T ss_pred HHHCE-EEEEEEECCCce---eEEEEEEEEcCC
Confidence 99995 999999975322 133556666543
No 402
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate binding, immune system; HET: SIA GAL GLC; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A* 1qfp_A 2bve_A* 1url_A*
Probab=99.14 E-value=4.8e-10 Score=73.20 Aligned_cols=94 Identities=17% Similarity=0.127 Sum_probs=62.1
Q ss_pred ccceeEEEeCCeEEEEeecCCCC----CCcceEEEeeCCee---eeeee-------eccCCcEEEcc-----CCcEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYN----HNLLLIAWLREGVS---EARSI-------IHSGGRYSITT-----AGALHIRD 73 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~----~~~~~vsW~kd~~~---~~~~~-------~~~~~r~~v~~-----~G~L~I~~ 73 (114)
.|+...+.+|.+|.|.|...... .....+.|+|.... ++... ....+||.+.. +.+|.|++
T Consensus 6 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~v~W~~~~~g~~~~v~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (119)
T 1qfo_A 6 SPKNVQGLSGSCLLIPCIFSYPADVPVSNGITAIWYYDYSGKRQVVIHSGDPKLVDKRFRGRAELMGNMDHKVCNLLLKD 85 (119)
T ss_dssp CCSEEEEETTSCEEECCEEECCTTSCC--CCEEEEEESTTTTCEEEEESSCGGGSCTTTTTTEEECSCGGGTBCCEEECS
T ss_pred cCCEEEEecCCcEEEEEEeeCCCccCCCCCeEEEEEEcCCCCCCEEEECCCCcccCccceeeEEEeCCCCCCEEEEEEcc
Confidence 56777899999999999973211 11127899997531 22111 11247998853 34799999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
++.+|+| .|.|.+.+.-..........+|.|.+
T Consensus 86 v~~~Dsg-~Y~C~v~~~~~~~~~~~~~~~L~V~~ 118 (119)
T 1qfo_A 86 LKPEDSG-TYNFRFEISDSNRWLDVKGTTVTVTT 118 (119)
T ss_dssp CCGGGCE-EEEEEEECC-CCEEECSSCEEEEEEC
T ss_pred CCcccCc-eEEEEEEeCCCceecccCCeEEEEec
Confidence 9999995 99999987532222233467888864
No 403
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.14 E-value=1.3e-10 Score=86.01 Aligned_cols=94 Identities=20% Similarity=0.315 Sum_probs=65.1
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--e---eeee---------eeccCCcEEEccCC-----cEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--S---EARS---------IIHSGGRYSITTAG-----ALHIRD 73 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~---~~~~---------~~~~~~r~~v~~~G-----~L~I~~ 73 (114)
+|.+..+.+|++|+|.|.+.+...+...+.|+|... . ++.. .....+||.+..++ .|.|++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (280)
T 3fku_X 6 QSGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRS 85 (280)
T ss_dssp CCCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 388899999999999999866422212799998431 1 1100 01124699887443 699999
Q ss_pred cCCCCCCeeeEEEEeecc------CCcEEeCCCeEEEEec
Q psy9140 74 TGMEDSYIRYYCQTTHKL------TGERKISPPSQVMVSE 107 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l------~~~~~~s~~a~L~V~~ 107 (114)
++.+|+| .|.|.+.|.. ......+..++|.|.+
T Consensus 86 v~~~DsG-~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~ 124 (280)
T 3fku_X 86 LRSEDTA-VYYCARSPSYICSGGTCVFDHWGQGTLVTVSS 124 (280)
T ss_dssp CCSTTCE-ECCEEECSSSSSSSTTCCCCEECCCCEEEECC
T ss_pred CChhhCE-EEEEEEecCCccccccccccEECCCEEEEEcC
Confidence 9999995 9999999861 1122355678899987
No 404
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.14 E-value=8.6e-11 Score=87.34 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=64.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcE-EEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRY-SITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~-~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
+.+...|. ..|.+|++++|.|.+.+. . ..+.|+||+..+... ....++ ....++.|.|.+|+.+|+| .|+|.
T Consensus 8 P~i~~~P~-~~V~~G~~VtL~C~~~~~-~--~~~~W~k~g~~~~~~--~~~~~~~~~~~~~~L~I~~v~~~DsG-~Y~C~ 80 (257)
T 1b6u_A 8 PSLLAHPG-PLVKSEETVILQCWSDVR-F--QHFLLHREGKFKDTL--HLIGEHHDGVSKANFSIGPMMQDLAG-TYRCY 80 (257)
T ss_dssp CEECCBSC-SEEESSCCEEEEEEESSC-C--SEEEEEEESTTCEEE--EEECBCCTTCEEEEEEECSCCTTTCE-EEEEE
T ss_pred CEEEEcCC-CEecCCCCEEEEEecCCC-C--cEEEEEECCCCCCcc--eeeeeccCCCceEEEEeecCCcccCE-EEEEe
Confidence 34666775 789999999999998531 1 278999998754211 111111 1124678999999999995 99999
Q ss_pred EeeccCC--cEEeCCCeEEEEecc
Q psy9140 87 TTHKLTG--ERKISPPSQVMVSEI 108 (114)
Q Consensus 87 a~n~l~~--~~~~s~~a~L~V~~~ 108 (114)
+.|...+ ....|..+.|.|.+.
T Consensus 81 a~~~~~~~~~s~~S~~~~L~V~~~ 104 (257)
T 1b6u_A 81 GSVTHSPYQLSAPSDPLDIVITGL 104 (257)
T ss_dssp EECSSCTTSCCCCCCCEEEEEECS
T ss_pred EeccCCCccccccCCCEEEecccC
Confidence 9875332 123466889999853
No 405
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=99.14 E-value=2.7e-10 Score=77.59 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=65.8
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCC-CcceEEEeeCCe--e---eeee--e--eccCCcEEEccCC---cEEEeec
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNH-NLLLIAWLREGV--S---EARS--I--IHSGGRYSITTAG---ALHIRDT 74 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~-~~~~vsW~kd~~--~---~~~~--~--~~~~~r~~v~~~G---~L~I~~v 74 (114)
+.-..+|....+.+|.+|.|.|.+..... ....+.|+|... . |+.. . ....+||.+..+. .|.|+++
T Consensus 6 ~~~v~q~~~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v 85 (135)
T 1p4b_L 6 DAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGA 85 (135)
T ss_dssp CCCEECCSEEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESC
T ss_pred ceeEEECCcEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCC
Confidence 34445566689999999999999854321 112789998532 1 1110 0 0125799886433 7999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+.+|+| .|.|.+.+. ........++|.|++..
T Consensus 86 ~~~DsG-~Y~C~~~~~--~~~~fg~GT~L~V~~~~ 117 (135)
T 1p4b_L 86 QTEDEA-IYFCALWYS--NHWVFGGGTKLTVLGGG 117 (135)
T ss_dssp CGGGCE-EEEEEEECS--SCEEECCCEEEEEC---
T ss_pred ChhHCE-EEEEEEecC--CCCEECCCEEEEEEcCC
Confidence 999995 999999975 23445678899998654
No 406
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=74.90 Aligned_cols=94 Identities=19% Similarity=0.205 Sum_probs=61.8
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCee-----eeeeee---ccCCcEEEcc---C--CcEEEeecCCCCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVS-----EARSII---HSGGRYSITT---A--GALHIRDTGMEDS 79 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~-----~~~~~~---~~~~r~~v~~---~--G~L~I~~v~~~D~ 79 (114)
.|+...+.+|.+|.|.|...+....+ .+.|+|.... ++.... ...+||.+.. + ..|.|++++.+|+
T Consensus 2 ~p~~v~~~~G~~v~L~C~~~~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds 80 (110)
T 2q87_A 2 KARTVAGPVGGSLSVQCPYEKEHRTL-NKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDA 80 (110)
T ss_dssp EEEEEEECTTSCEEEEEECCGGGTTS-EEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGC
T ss_pred CCcEEEEeCCCcEEEEeEecCCcCCc-eEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHC
Confidence 46778899999999999985432212 7999997521 111000 1357998852 2 3799999999999
Q ss_pred CeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 80 YIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 80 gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
| .|.|.+.+...+. ......+|.|..++
T Consensus 81 G-~Y~C~~~~~~~g~-~~~~~~~v~v~V~p 108 (110)
T 2q87_A 81 G-TYWCGVDTPWLQD-FHDPVVEVEVSVFP 108 (110)
T ss_dssp E-EEEEEEECTTSCC-BCCCSEEEEEEEC-
T ss_pred E-EEEEEEecCccCc-cCCccEEEEEEEec
Confidence 5 9999999875220 01335566665443
No 407
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.13 E-value=2.6e-10 Score=80.79 Aligned_cols=93 Identities=22% Similarity=0.388 Sum_probs=62.8
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--ee--e-eee-----------eccCCcEEEccCC-----cEE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--SE--A-RSI-----------IHSGGRYSITTAG-----ALH 70 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~~--~-~~~-----------~~~~~r~~v~~~G-----~L~ 70 (114)
.+|....|.+|.+|.|.|.+.+...+...+.|+|... .. + ... ....+||.+..++ .|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (221)
T 3m8o_H 5 VESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQ 84 (221)
T ss_dssp EEESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEE
T ss_pred EccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEE
Confidence 4567788999999999999865321112899997431 11 1 000 0124899987554 499
Q ss_pred EeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
|++|+.+|+| .|.|.+.|... ....+..+.|.|.
T Consensus 85 I~~v~~~DsG-~Y~C~~~~~~~-~~~~~~~~~l~V~ 118 (221)
T 3m8o_H 85 MNSLKSDDTA-MYYCVIRGDVY-NRQWGQGTLVTVS 118 (221)
T ss_dssp ECSCCGGGCE-EEEEEEESCTT-CCCBBCCEEEEEC
T ss_pred ECCCCHHHCE-EEEEEEECCCh-hheECCCEEEEEe
Confidence 9999999995 99999998621 1123456678886
No 408
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.13 E-value=1.4e-10 Score=84.46 Aligned_cols=94 Identities=21% Similarity=0.341 Sum_probs=63.2
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe--ee--e-eee---------eccCCcEEEccCCc-----EEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV--SE--A-RSI---------IHSGGRYSITTAGA-----LHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~--~~--~-~~~---------~~~~~r~~v~~~G~-----L~I~ 72 (114)
.+|+...|.+|++|.|.|.+.++..+...+.|+|... .. + ... ....+||.+..++. |.|+
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (253)
T 3liz_H 5 VESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMS 84 (253)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEEC
T ss_pred EcCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEEC
Confidence 4577889999999999999854322222789998431 11 1 000 01247998875443 9999
Q ss_pred ecCCCCCCeeeEEEEeeccCC-cEEeCCCeEEEEe
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTG-ERKISPPSQVMVS 106 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~-~~~~s~~a~L~V~ 106 (114)
+++.+|+| .|.|.+.|.... ....+..++|.|.
T Consensus 85 ~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~l~V~ 118 (253)
T 3liz_H 85 SLKSEDTA-MYYCTRDPAGRAWFAYWGQGTLVTVS 118 (253)
T ss_dssp SCCGGGCE-EEEEEECCBTTTBCCEECCCEEEEEC
T ss_pred CCChhhCE-EEEEEEecCCcceeeEECCCEEEEEe
Confidence 99999995 999999986311 2234556788886
No 409
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.13 E-value=2.5e-10 Score=77.25 Aligned_cols=82 Identities=26% Similarity=0.380 Sum_probs=58.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--CeeeeeeeeccCCcEEEc-----cCCcEEEeecCCCCCCee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARSIIHSGGRYSIT-----TAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~~~~~~~r~~v~-----~~G~L~I~~v~~~D~gg~ 82 (114)
.+..|+...+.+|+++.|.|...+...+...+.|+|. +..... ....++||.+. .+..|.|++++.+|+| .
T Consensus 3 V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~-li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG-~ 80 (126)
T 3moq_A 3 VDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQ-SISIGGRYVETVNKGSKSFSLRISDLRVEDSG-T 80 (126)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCE-ECCCBTTEEEEEETTTTEEEEEECSCCGGGCE-E
T ss_pred eEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceE-EEEeCCcEEEEEeCCCCEEEEEECcCChHhCE-E
Confidence 3556888999999999999998543211127899994 222100 12356899874 2346999999999995 9
Q ss_pred eEEEEeeccCC
Q psy9140 83 YYCQTTHKLTG 93 (114)
Q Consensus 83 Y~C~a~n~l~~ 93 (114)
|.|.+.|....
T Consensus 81 Y~C~~~~~~~~ 91 (126)
T 3moq_A 81 YKCQAFYVFFA 91 (126)
T ss_dssp EEEEEEEEEET
T ss_pred EEEEEEEcCCC
Confidence 99999987543
No 410
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.13 E-value=1.4e-11 Score=86.17 Aligned_cols=81 Identities=19% Similarity=0.311 Sum_probs=55.7
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSY 80 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~g 80 (114)
+.+.+.+....+.+|..+.|.|.+.++.++++.++|+||+..+... ....+++|.+ .+.|.|.+++.+|+|
T Consensus 113 p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~G 190 (213)
T 3d9a_L 113 PTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSM--SSTLTLTKDEYERHN 190 (213)
T ss_dssp CEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEE--EEEEEEEHHHHHHCC
T ss_pred ceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEE--EEEEEEeccccCCCC
Confidence 3344444444456899999999996533222279999999865211 0123445543 358999999999995
Q ss_pred eeeEEEEeecc
Q psy9140 81 IRYYCQTTHKL 91 (114)
Q Consensus 81 g~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 191 -~Y~C~a~n~~ 200 (213)
T 3d9a_L 191 -SYTCEATHKT 200 (213)
T ss_dssp -EEEEEEECTT
T ss_pred -EEEEEEEEcc
Confidence 9999999974
No 411
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.12 E-value=4.6e-11 Score=89.40 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=64.7
Q ss_pred eccceeEEEeCCeEEEEeecCCC--CCCcc-eEEEeeCCeeeeeeeeccCCcEEEccCC----cEEEeecCCCCCCeeeE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAY--NHNLL-LIAWLREGVSEARSIIHSGGRYSITTAG----ALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~--~~~~~-~vsW~kd~~~~~~~~~~~~~r~~v~~~G----~L~I~~v~~~D~gg~Y~ 84 (114)
+.|++..|..|.+|.|.|.+.+. +..+. .+.|.+|+..+ .++|+....+| .|.|.+++.+|+ |.|+
T Consensus 5 i~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l------~~~~~~~~~~~~~~~~L~i~~~~~~d~-g~y~ 77 (313)
T 2d9q_B 5 ISVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQ------PGGRQQRLSDGTQESIITLPHLNHTQA-FLSC 77 (313)
T ss_dssp EEESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBC------TTCEECCCSSSCCCEEEEESCCCSSEE-EEEE
T ss_pred EECCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEEC------CccceEEEecCeEEEEEEEeccCCCcc-ceEE
Confidence 57889999999999999999764 21112 78999998853 23455444454 599999999999 5999
Q ss_pred EEEeeccCCcEEeCCCeEEEEecccc
Q psy9140 85 CQTTHKLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 85 C~a~n~l~~~~~~s~~a~L~V~~~~~ 110 (114)
|.+.+..+ ..+..+.|.|..++.
T Consensus 78 c~~~~~~~---~~~~~~~l~v~~~P~ 100 (313)
T 2d9q_B 78 SLNWGNSL---QILDQVELRAGYPPA 100 (313)
T ss_dssp EEESSSSE---EEEEEEEEEECCCCC
T ss_pred eeecCCCc---eeEEEEEEccCCCCC
Confidence 99976422 345567777776543
No 412
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.12 E-value=2.8e-10 Score=84.32 Aligned_cols=97 Identities=21% Similarity=0.195 Sum_probs=65.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ceeeeee-------eeccCCcEEEccCCc---EEEeecCCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GVSEARS-------IIHSGGRYSITTAGA---LHIRDTGME 77 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~~~~~~-------~~~~~~r~~v~~~G~---L~I~~v~~~ 77 (114)
+...|. ..+.+|++|.|.|.+.++..+...+.|+|. +..+... .....+||.+..++. |.|.+++.+
T Consensus 143 v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 221 (280)
T 3fku_X 143 LTQPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPE 221 (280)
T ss_dssp BBCCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGG
T ss_pred EEeCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHH
Confidence 334444 889999999999999663211127899883 2221100 001257898875543 999999999
Q ss_pred CCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 78 DSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 78 D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|+| .|.|.+.|..+.....+..++|.|...
T Consensus 222 DsG-~Y~C~~~~~~~~~~~~g~~t~l~V~~~ 251 (280)
T 3fku_X 222 DEA-DYYCSTWDSSLSAVVFGGGTKLTVLGQ 251 (280)
T ss_dssp GCS-EEEEEEEETTTTEEEEBCCCEEEEC--
T ss_pred HCE-EEEEEEecCCCCceEECCCEEEEECCC
Confidence 995 999999997533445667889999643
No 413
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.12 E-value=3.1e-10 Score=83.00 Aligned_cols=93 Identities=23% Similarity=0.404 Sum_probs=64.9
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee--eeee------------eccCCcEEEcc-----CCcE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE--ARSI------------IHSGGRYSITT-----AGAL 69 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~--~~~~------------~~~~~r~~v~~-----~G~L 69 (114)
...|.+..+.+|+++.|.|.+.+.......+.|+|++ ..+ +... ....+||.+.. .+.|
T Consensus 155 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 234 (268)
T 1x9q_A 155 LDETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYL 234 (268)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred EECCCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEE
Confidence 3456678899999999999996543211289999852 221 1000 02357998863 2579
Q ss_pred EEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 70 HIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 70 ~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
.|.+++.+|+| .|.|.|.|. +...-...++|.|.
T Consensus 235 ~I~~v~~~DsG-~Y~C~a~~~--~~~~fg~Gt~L~V~ 268 (268)
T 1x9q_A 235 QMNNLRVEDTG-IYYCTGASY--GMEYLGQGTSVTVS 268 (268)
T ss_dssp EECSCCGGGCE-EEEEEEEET--TEEEECCCEEEEEC
T ss_pred EECCCCHHHCE-EEEEEEccC--CccEECCCEEEEeC
Confidence 99999999995 999999984 34445668888773
No 414
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=99.12 E-value=2.1e-10 Score=75.05 Aligned_cols=94 Identities=15% Similarity=0.236 Sum_probs=63.4
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee-------eccCCcEEEcc---CC--cEEEeec
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI-------IHSGGRYSITT---AG--ALHIRDT 74 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~-------~~~~~r~~v~~---~G--~L~I~~v 74 (114)
..|....+.+|.+|.|.|...+...+...+.|.|.. .. ++... ...++||.+.. ++ .|.|+++
T Consensus 4 q~p~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 83 (114)
T 1u9k_A 4 LEEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDL 83 (114)
T ss_dssp -CCEEEEECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSC
T ss_pred cCCccEEEeCCCcEEEEeEecCcccCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCcCCEEEEEECCC
Confidence 356778899999999999985321111178999953 21 21110 01148998853 22 6999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+.+|+| .|.|.+.+..+.........+|.|.
T Consensus 84 ~~~Dsg-~Y~C~~~~~~~~~~~~~~~i~L~V~ 114 (114)
T 1u9k_A 84 QVTDSG-LYRCVIYHPPNDPVVLFHPVRLVVT 114 (114)
T ss_dssp CGGGCE-EEEEEEECTTSCCEECSCCEEEEEC
T ss_pred ChHHCE-EEEEEEecCCCCceeeeceEEEEEC
Confidence 999995 9999999875444445667788773
No 415
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=99.12 E-value=5.4e-10 Score=72.97 Aligned_cols=78 Identities=19% Similarity=0.314 Sum_probs=54.9
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee----c----cCCcEEEccCC--cEEEeec
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII----H----SGGRYSITTAG--ALHIRDT 74 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~----~----~~~r~~v~~~G--~L~I~~v 74 (114)
.+..|....+.+|.+|.|.|.......+ .+.|+|.. . .++.... . .++||.+..++ .|.|+++
T Consensus 4 v~q~p~~~~v~~G~~vtL~C~~~~~~~~--~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~L~I~~~ 81 (112)
T 1fo0_B 4 LEQNPRWRLVPRGQAVNLRCILKNSQYP--WMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVA 81 (112)
T ss_dssp EEEECSEEECCTTCCEEEEEEESCTTCC--EEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred EEeCCCeEEEecCCcEEEEEEeCCCCCc--eEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCCeEEEcCC
Confidence 4556888899999999999998543222 78999853 2 1211100 0 13799875321 8999999
Q ss_pred CCCCCCeeeEEEEeec
Q psy9140 75 GMEDSYIRYYCQTTHK 90 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~ 90 (114)
+.+|+| .|.|.+.+.
T Consensus 82 ~~~Dsg-~Y~C~~~~~ 96 (112)
T 1fo0_B 82 NMSQGR-TLYCTCSAD 96 (112)
T ss_dssp SCCSCE-EEEEEEESS
T ss_pred CHhHCE-EEEEEEEcC
Confidence 999995 999999874
No 416
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.11 E-value=2e-11 Score=85.53 Aligned_cols=81 Identities=20% Similarity=0.324 Sum_probs=59.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeee------eeeccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEAR------SIIHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~------~~~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
+.+.+.+.+..+.+|.++.|.|.+.++.++.+.++|+||+..+.. .....+++|.+. ..|.|.+++.+|+|
T Consensus 112 P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~g- 188 (211)
T 3tv3_L 112 PSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAAS--SYLSLTPEQWKSHR- 188 (211)
T ss_dssp CEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEE--EEEEECHHHHHHSS-
T ss_pred CeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEE--EEEEEcHHHhCCCC-
Confidence 446666666666689999999999764332238999999987521 012345667664 57999999999995
Q ss_pred eeEEEEeecc
Q psy9140 82 RYYCQTTHKL 91 (114)
Q Consensus 82 ~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 189 ~Y~C~v~~~~ 198 (211)
T 3tv3_L 189 SYSCQVTHEG 198 (211)
T ss_dssp CEEEEEEETT
T ss_pred eEEEEEEECC
Confidence 9999999974
No 417
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=99.11 E-value=2.1e-09 Score=72.74 Aligned_cols=98 Identities=21% Similarity=0.319 Sum_probs=67.6
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee-----eccCCcEEEc--cCC---cEEEeec
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI-----IHSGGRYSIT--TAG---ALHIRDT 74 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~-----~~~~~r~~v~--~~G---~L~I~~v 74 (114)
.+..|....+.+|.+|.|.|........+ .+.|+|.. . .++... ....+||.+. +++ .|.|+++
T Consensus 12 v~Q~p~~v~v~~G~~vtL~C~~~~~~~~~-~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~ 90 (134)
T 3bik_B 12 LTFYPAWLTVSEGANATFTCSLSNWSEDL-MLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDT 90 (134)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCTTC-EEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSC
T ss_pred EEECCCeEEEeCCCCEEEEEEeCCCCCCc-EEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCC
Confidence 44568888999999999999985432112 79999852 2 121111 1236899884 233 6999999
Q ss_pred CCCCCCeeeEEEEeeccCCc-EEeCCCeEEEEeccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGE-RKISPPSQVMVSEIA 109 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~-~~~s~~a~L~V~~~~ 109 (114)
+.+|+| .|.|.+.+.-.+. ...+..++|.|.+..
T Consensus 91 ~~~Dsg-~Y~C~~~~~~~~~~~~~~~gt~L~V~~~~ 125 (134)
T 3bik_B 91 RRNDSG-IYLCGAISLHPKAKIEESPGAELVVTERI 125 (134)
T ss_dssp CGGGCE-EEEEEEEECSSSCEEEECCCEEEEEECCC
T ss_pred ChHHCE-EEEEEEEeCCCCceEEEcCCEEEEEeCCC
Confidence 999995 9999998753222 234668999998654
No 418
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=99.10 E-value=6.7e-10 Score=72.69 Aligned_cols=93 Identities=17% Similarity=0.260 Sum_probs=62.2
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee--------ccCCcEEEcc---C--CcEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII--------HSGGRYSITT---A--GALHIRD 73 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~--------~~~~r~~v~~---~--G~L~I~~ 73 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .++.... .-.+||.+.. + ..|.|++
T Consensus 5 ~q~~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (116)
T 1a2y_B 5 QESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNS 84 (116)
T ss_dssp EEECCSEECTTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECS
T ss_pred EcCCCEEEeCCCcEEEEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECC
Confidence 346667899999999999985432111279999853 1 1221100 1147998863 2 3699999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
++.+|+| .|.|.+.+.. ....-...++|.|.
T Consensus 85 ~~~~Dsg-~Y~C~~~~~~-~~~~fg~GT~l~V~ 115 (116)
T 1a2y_B 85 LHTDDTA-RYYCARERDY-RLDYWGQGTTLTVS 115 (116)
T ss_dssp CCGGGCE-EEEEEEESSS-SEEEECCCEEEEEC
T ss_pred CCHHHCE-EEEEEEecCC-CceEECCCEEEEEe
Confidence 9999995 9999999752 23344567788874
No 419
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=99.10 E-value=4.9e-10 Score=73.74 Aligned_cols=96 Identities=15% Similarity=0.228 Sum_probs=63.3
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee---------eccCCcEEEcc---C--CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI---------IHSGGRYSITT---A--GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~---------~~~~~r~~v~~---~--G~L~I~ 72 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .++... ....+||.+.. + ..|.|+
T Consensus 5 ~qp~~~~~~~G~~v~L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (120)
T 1mfa_H 5 QQSGTVVARPGASVKMSCKASGYTFTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAVTSTTTAYMELS 84 (120)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCEEEeCCCCEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEeCCCCEEEEEEC
Confidence 457778899999999999985322111179999842 2 122111 01247998863 2 269999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+++.+|+| .|.|.+.+.......-...++|.|...
T Consensus 85 ~~~~~Dsg-~Y~C~~~~~~~~~~~fg~GT~l~V~~~ 119 (120)
T 1mfa_H 85 SLTSEDSA-VYYCTRGGHGYYGDYWGQGASLTVSSA 119 (120)
T ss_dssp SCCGGGCE-EEEEEEEETTEEEEEECCCEEEEEC--
T ss_pred CCCHHHCE-EEEEEEecCCCceeEECCCEEEEEEcC
Confidence 99999995 999999975211234466888988754
No 420
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.09 E-value=2.4e-11 Score=86.79 Aligned_cols=82 Identities=12% Similarity=0.168 Sum_probs=58.6
Q ss_pred cceeeccceeE--EEeCCeEEEEeecCCCC--CCcceEEEeeCCeeeeee-----eeccCCcEEEccCCcEEEeecCCCC
Q psy9140 8 SDYEINTGNTF--VLRGNIAVLQCNIPAYN--HNLLLIAWLREGVSEARS-----IIHSGGRYSITTAGALHIRDTGMED 78 (114)
Q Consensus 8 ~~~~v~~~d~~--v~~G~~AvL~C~~~~~~--~~~~~vsW~kd~~~~~~~-----~~~~~~r~~v~~~G~L~I~~v~~~D 78 (114)
+.+.++|.... +.+|++|.|.|.+.++. .+.+.|+|+|++..+... ....+++|.. ++.|.|.+++.+|
T Consensus 10 p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--~~~L~I~~~~~~D 87 (218)
T 2rgs_A 10 PSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRV--VSTLPIQHQDWMS 87 (218)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEE--EEEEECCHHHHHT
T ss_pred CEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEE--EEEEEEcHHHcCC
Confidence 34555565555 88999999999997652 121289999999764210 1123456655 3689999999999
Q ss_pred CCeeeEEEEeeccC
Q psy9140 79 SYIRYYCQTTHKLT 92 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~ 92 (114)
+| .|+|.|.|...
T Consensus 88 ~g-~Y~C~~~~~~~ 100 (218)
T 2rgs_A 88 GK-EFKCKVNNKDL 100 (218)
T ss_dssp TC-CEEEEEEETTC
T ss_pred CC-eEEEEEECCcC
Confidence 95 99999999754
No 421
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.09 E-value=2.2e-10 Score=94.76 Aligned_cols=93 Identities=18% Similarity=0.225 Sum_probs=68.6
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEE-Ee--eCCeeeeeeeeccCCcEEEcc---CCcEEEeecCCCCCCe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIA-WL--REGVSEARSIIHSGGRYSITT---AGALHIRDTGMEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vs-W~--kd~~~~~~~~~~~~~r~~v~~---~G~L~I~~v~~~D~gg 81 (114)
+.|. .+++..|.+|.+|.|.|.+.+.+.+ .+. |+ +|+..+. .+.+..+.. ++.|.|.+++.+|+|
T Consensus 166 p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p--~i~~W~~~~~g~~l~-----~~~~~~~~~~~~~~~l~I~~~~~~d~g- 236 (731)
T 2v5y_A 166 PHFL-RIQNVEVNAGQFATFQCSAIGRTVA--GDRLWLQGIDVRDAP-----LKEIKVTSSRRFIASFNVVNTTKRDAG- 236 (731)
T ss_dssp CEEC-CCCCEEEETTSCEEEEEEEESCCCT--TCEEEEEESSSCCEE-----EEEEEECCSSEEEEEEEECSCCTTTCE-
T ss_pred cccc-cccceEEeCCCcEEEEEEeCCCCCC--ceeEEEecCCCcccc-----ccceEEeccccceEEEEEcccccccCe-
Confidence 3344 7889999999999999999776555 455 88 6776542 111111211 379999999999995
Q ss_pred eeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 82 RYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 82 ~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
.|+|.|.|..+. ..+..+.|.|..++..
T Consensus 237 ~Y~c~A~n~~G~--~~s~~~~l~V~~~P~~ 264 (731)
T 2v5y_A 237 KYRCMIRTEGGV--GISNYAELVVKEPPVP 264 (731)
T ss_dssp EEEEEEEETTEE--EECCCEEEEEECCCCB
T ss_pred EEEEEEECCCCC--cceeeEEEEEecCCCC
Confidence 999999998763 2577889999987764
No 422
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.09 E-value=4.7e-10 Score=77.36 Aligned_cols=92 Identities=18% Similarity=0.236 Sum_probs=64.9
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee----eccCCcEEEcc---CCcEEEeecCCCC
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI----IHSGGRYSITT---AGALHIRDTGMED 78 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~----~~~~~r~~v~~---~G~L~I~~v~~~D 78 (114)
+..|....+.+|.+|.|.|.+...... .+.|+|.. . .+++.. ....+||.+.. +..|.|++++.+|
T Consensus 4 ~Q~p~~v~v~~G~~vtL~C~~s~~~~~--~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~D 81 (143)
T 3u6r_L 4 TQSPATLSLSPGERATLSCRASQSVNK--YLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPED 81 (143)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTT--CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred EECCCEEEEeCCCCEEEEEEECCCCce--eeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccC
Confidence 446778899999999999998654322 78999853 2 222110 01257998853 3369999999999
Q ss_pred CCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 79 SYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 79 ~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+| .|.|.+.+.. ......++|.|+.+
T Consensus 82 sG-~Y~C~~~~~~---~~fg~gt~L~V~~~ 107 (143)
T 3u6r_L 82 FA-VYYCQQRSDW---VTFGGGTKVEIKAA 107 (143)
T ss_dssp CE-EEEEEECSSB---CEECCCEEEEEC--
T ss_pred CE-EEEEEEecCC---CEECCCEEEEECCC
Confidence 95 9999999863 24566889999753
No 423
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=99.09 E-value=6.6e-10 Score=74.37 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=61.1
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCC--e---eeeeeeec--------cCCcEEEc--cC---CcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREG--V---SEARSIIH--------SGGRYSIT--TA---GALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~--~---~~~~~~~~--------~~~r~~v~--~~---G~L~I 71 (114)
..+|....+.+|.+|.|.|...+...... .+.|+|.. . .|+..... ..+||.+. ++ ..|.|
T Consensus 4 ~~qp~~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I 83 (126)
T 2h32_A 4 LHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSI 83 (126)
T ss_dssp EECCSEEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEE
T ss_pred eECCCCEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEE
Confidence 34567788999999999999854311112 79999853 1 22221110 14699886 22 36999
Q ss_pred eecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
++++.+|+| .|.|.+.+.... .+...+|.|.+
T Consensus 84 ~~~~~~DsG-~Y~C~~~~~~~~---~~~~t~l~v~~ 115 (126)
T 2h32_A 84 SELQPEDEA-MYYCAMGARSSE---KEEREREWEEE 115 (126)
T ss_dssp CSCCGGGCE-EEEEEEECSCCC---CCCTTCC----
T ss_pred CCCChhHCE-EEEEEEEcCCCC---cceeEEEeecc
Confidence 999999995 999999986543 35677888864
No 424
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.09 E-value=9e-10 Score=79.24 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=64.8
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee--------eccCCcEEEccC-C----cEEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI--------IHSGGRYSITTA-G----ALHI 71 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~--------~~~~~r~~v~~~-G----~L~I 71 (114)
....|++..+.+|.+|.|.|.+.+...+...+.|+|.. . .+++.. ....+||.+..+ + .|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 44568888999999999999986531111279999853 2 121110 013689988632 2 7999
Q ss_pred eecCCCCCCeeeEEEEeecc-CCcEEeCCCeEEEEe
Q psy9140 72 RDTGMEDSYIRYYCQTTHKL-TGERKISPPSQVMVS 106 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l-~~~~~~s~~a~L~V~ 106 (114)
++++.+|+| .|.|.+.|.- ......+..++|.|.
T Consensus 84 ~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~L~V~ 118 (230)
T 1ypz_F 84 YSLEEEDEA-IYYCSYGEGSSGFHKVFAEGTKLIVI 118 (230)
T ss_dssp CSCCGGGCS-EEEEEECCTTTCCCCEECSCEEEEEE
T ss_pred CcCChhhCE-EEEEEEECCCCCcccccCCCEEEEEe
Confidence 999999995 9999999841 011123456789987
No 425
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.09 E-value=2.2e-11 Score=86.24 Aligned_cols=80 Identities=8% Similarity=0.098 Sum_probs=56.7
Q ss_pred eeccceeE-EEeCCeEEEEeecCCCC-CCcc-eEEEeeCCeeeeee-----eeccCCcEEEccCCcEEEeecCCCCCCee
Q psy9140 11 EINTGNTF-VLRGNIAVLQCNIPAYN-HNLL-LIAWLREGVSEARS-----IIHSGGRYSITTAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 11 ~v~~~d~~-v~~G~~AvL~C~~~~~~-~~~~-~vsW~kd~~~~~~~-----~~~~~~r~~v~~~G~L~I~~v~~~D~gg~ 82 (114)
...|.... +.+|++|.|.|.+.++. .+.. .++|+|++..+... ....+++|.. ++.|.|.+++.+|+| .
T Consensus 6 ~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--~~~L~I~~~~~~D~G-~ 82 (207)
T 2vol_A 6 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRS--VSELPIMHQDWLNGK-E 82 (207)
T ss_dssp EECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEE--EEEEECCHHHHHTTC-C
T ss_pred EeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEE--EEEEEEehhHcCCCC-E
Confidence 34455455 88999999999996653 1222 89999999764210 0123456644 368999999999995 9
Q ss_pred eEEEEeeccCC
Q psy9140 83 YYCQTTHKLTG 93 (114)
Q Consensus 83 Y~C~a~n~l~~ 93 (114)
|+|.|.|..+.
T Consensus 83 Y~C~a~~~~~~ 93 (207)
T 2vol_A 83 FKCRVNSAAFP 93 (207)
T ss_dssp EEEEEECTTCS
T ss_pred EEEEEEccCCC
Confidence 99999997653
No 426
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.09 E-value=3.5e-10 Score=89.23 Aligned_cols=82 Identities=21% Similarity=0.349 Sum_probs=60.1
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee------eeccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS------IIHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~------~~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
+.+.+.|.+..+.+|+.+.|.|.+.+++.++..++|+||+..+... ....+++|.+. ..|.|.+++.+|+|
T Consensus 115 P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~G- 191 (523)
T 2rcj_C 115 PTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAAS--SYLSLTPEQWKSHR- 191 (523)
T ss_pred CeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEE--EEEEEechhcCCCc-
Confidence 4467788888889999999999998765432389999999864210 01123344332 46999999999995
Q ss_pred eeEEEEeeccC
Q psy9140 82 RYYCQTTHKLT 92 (114)
Q Consensus 82 ~Y~C~a~n~l~ 92 (114)
.|+|.|.|..+
T Consensus 192 ~Y~C~a~n~~~ 202 (523)
T 2rcj_C 192 SYSCQVTHEGS 202 (523)
T ss_pred eEEEEEEecCc
Confidence 99999999854
No 427
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=99.09 E-value=1.6e-09 Score=71.58 Aligned_cols=94 Identities=20% Similarity=0.279 Sum_probs=62.6
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeeeee---------ccCCcEEEccC-----CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARSII---------HSGGRYSITTA-----GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~~~---------~~~~r~~v~~~-----G~L~I~ 72 (114)
.+|....+.+|.+|.|.|...+.......+.|+|... .++.... ...+||.+..+ ..|.|+
T Consensus 5 ~qp~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (123)
T 2wzp_D 5 QESGGGLVQAGGSLRLSCTASRRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDSGKNTVYLQMN 84 (123)
T ss_dssp EEEECEEEETTCCEEEEEEESSCCSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEETTEEEEEEEEC
T ss_pred ECCCCEEEcCCCcEEEEEEecCCCccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeCCCCEEEEEEC
Confidence 4577789999999999999854221112799998642 1221100 12479988632 379999
Q ss_pred ecCCCCCCeeeEEEEeecc-----CCcEEeCCCeEEEEe
Q psy9140 73 DTGMEDSYIRYYCQTTHKL-----TGERKISPPSQVMVS 106 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l-----~~~~~~s~~a~L~V~ 106 (114)
+++.+|+| .|.|.+.+.. +....-...++|.|.
T Consensus 85 ~~~~~Dsg-~Y~C~~~~~~~~~~~~~~~~fg~GT~l~V~ 122 (123)
T 2wzp_D 85 SLKPEDTA-IYYCAARSGGFSSNRELYDGWGQGTQVTVS 122 (123)
T ss_dssp SCCGGGCE-EEEEEEEESSBCSCGGGCSEECCCEEEEEE
T ss_pred CCCHHHCE-EEEEEEecCcccccccccceECCCEEEEEc
Confidence 99999995 9999999852 122234557777775
No 428
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.09 E-value=3.4e-11 Score=86.70 Aligned_cols=81 Identities=19% Similarity=0.313 Sum_probs=55.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSY 80 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~g 80 (114)
+.+.+.+....+.+|.++.|.|.+.++.++.+.++|+||+..+... ....+++|.+. +.|.|.+++.+|+|
T Consensus 155 P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~--~~L~i~~~~~~d~G 232 (254)
T 2c1o_A 155 PTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS--STLTLTKDEYERHN 232 (254)
T ss_dssp CEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEE--EEEEEEHHHHHTCC
T ss_pred CeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEE--EEEEeccccccCCC
Confidence 3445544444455799999999996643222269999999865211 01224556543 58999999999995
Q ss_pred eeeEEEEeecc
Q psy9140 81 IRYYCQTTHKL 91 (114)
Q Consensus 81 g~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 233 -~Y~C~a~n~~ 242 (254)
T 2c1o_A 233 -SYTCEATHKT 242 (254)
T ss_dssp -EEEEEEECTT
T ss_pred -eEEEEEEcCC
Confidence 9999999974
No 429
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=99.08 E-value=7.6e-10 Score=73.85 Aligned_cols=99 Identities=20% Similarity=0.287 Sum_probs=66.6
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee---------ccCCcEEEcc---C--CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII---------HSGGRYSITT---A--GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~---------~~~~r~~v~~---~--G~L~I~ 72 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .++.... ...+||.+.. + -.|.|+
T Consensus 5 ~q~~~~~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (127)
T 1mqk_H 5 QESGGDLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYYPDTVKGRFTISRDNAKNTLYLQMS 84 (127)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCTTTBTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCCccCCcEEEEEEECCCCCCEEEEEEecCCCcEEcCcccCCCEEEEEeCCCCEEEEEEC
Confidence 456678899999999999984321111178999853 1 1211100 1247998863 2 269999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccccc
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIALP 111 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~~~ 111 (114)
+++.+|+| .|.|.+.+.......-...++|.|.+.+..
T Consensus 85 ~~~~~Dsg-~Y~C~~~~~~~~~~~fg~gT~L~V~~~~~~ 122 (127)
T 1mqk_H 85 SLKSEDTA-MYYCVRHEYYYAMDYWGQGTTVTVSSAWRH 122 (127)
T ss_dssp SCCGGGCE-EEEEEEEETTTEEEEECCCEEEEECSSCCC
T ss_pred CCCHHHCE-EEEEEEecCCcCcceECCCEEEEEeCCccc
Confidence 99999995 999999875212334466889999987654
No 430
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.08 E-value=1.7e-10 Score=81.85 Aligned_cols=97 Identities=8% Similarity=-0.032 Sum_probs=62.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeeeeeeccC----CcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEARSIIHSG----GRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~~~~~~~----~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
..+.+. ..+.+|..+.|.|.+.+...... .++|+||+..+.......+ ..+.. +..|.|..+..+|. |.|+
T Consensus 95 ~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~--~~~l~i~~~~~d~~-g~yt 170 (202)
T 1vca_A 95 PEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETK--SLEVTFTPVIEDIG-KVLV 170 (202)
T ss_dssp CEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEE--EEEEEECCCGGGTT-CEEE
T ss_pred CEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEE--EEEEEEEeeeccCC-CeEE
Confidence 345554 67999999999999965422222 7899999986522111111 01211 24578888887776 5999
Q ss_pred EEEeeccCCcE----EeCCCeEEEEecccc
Q psy9140 85 CQTTHKLTGER----KISPPSQVMVSEIAL 110 (114)
Q Consensus 85 C~a~n~l~~~~----~~s~~a~L~V~~~~~ 110 (114)
|.|.|.+++.. ..+....|.|..|+.
T Consensus 171 C~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 171 CRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred EEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 99999987521 123367888887764
No 431
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.08 E-value=5.6e-11 Score=83.65 Aligned_cols=79 Identities=16% Similarity=0.270 Sum_probs=53.5
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCCee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~gg~ 82 (114)
+.+.+....+++|+++.|.|.+.++.++++.++|+||+..+... ....++.|.+. ..|.|..++.+|+| .
T Consensus 117 v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~g-~ 193 (216)
T 2xzc_L 117 VFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLS--STLTLSKADYEKHK-V 193 (216)
T ss_dssp EEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEE--EEEEEEHHHHTTCC-E
T ss_pred eEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEE--EEEEECHHHhCCCC-c
Confidence 34433333345799999999997643222279999999865211 01123445443 47999999999995 9
Q ss_pred eEEEEeecc
Q psy9140 83 YYCQTTHKL 91 (114)
Q Consensus 83 Y~C~a~n~l 91 (114)
|+|.|.|..
T Consensus 194 Y~C~a~n~~ 202 (216)
T 2xzc_L 194 YACEVTHQG 202 (216)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEcCC
Confidence 999999974
No 432
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.08 E-value=1.4e-10 Score=86.12 Aligned_cols=89 Identities=17% Similarity=0.143 Sum_probs=61.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEc----cCCcEEEeecCCCCCCeeeEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSIT----TAGALHIRDTGMEDSYIRYYC 85 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~----~~G~L~I~~v~~~D~gg~Y~C 85 (114)
+.+.|. ..|.+|+++.|+|.+.+. + ..+.|+||+..+. .+.++... .+++|.|.+|+ |+ |.|+|
T Consensus 110 l~~~p~-~~V~~G~~vtL~C~~~~~--~-~~~~w~k~g~~~~-----~~~~~~~~~~~~~~~~l~I~~v~--D~-G~Y~C 177 (257)
T 1b6u_A 110 LSAQPG-PTVLAGESVTLSCSSRSS--Y-DMYHLSREGEAHE-----RRFSAGPKVNGTFQADFPLGPAT--HG-GTYRC 177 (257)
T ss_dssp EECSSC-TTCBTTCEEEEEEECSSC--C-SEEEEEETTSSCE-----ECCBCBCCSSSCCBEEEEEEECC--SC-EEEEE
T ss_pred eEccCC-CccCCCCEEEEEEeCCCC--C-cEEEEEECCcccC-----cccccccccCCceeEEEEecccc--cC-EEEEE
Confidence 444553 468899999999998653 2 2789999998642 12222222 26789999999 98 59999
Q ss_pred EEeeccCC--cEEeCCCeEEEEecccc
Q psy9140 86 QTTHKLTG--ERKISPPSQVMVSEIAL 110 (114)
Q Consensus 86 ~a~n~l~~--~~~~s~~a~L~V~~~~~ 110 (114)
.|.|.... -...|.+..|.|+.++.
T Consensus 178 ~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 178 FGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp EEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred EEEcCCCCcccccCCCCEEEEEeccCC
Confidence 99975221 11356788999987643
No 433
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.08 E-value=3.4e-10 Score=84.15 Aligned_cols=90 Identities=12% Similarity=0.122 Sum_probs=62.0
Q ss_pred eeccceeEEEeCCeEEEEeecCCC-----CCCcceEEEeeCCeeeeeeeeccCCcEEEccC--CcEEEeecCCCCCCeee
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAY-----NHNLLLIAWLREGVSEARSIIHSGGRYSITTA--GALHIRDTGMEDSYIRY 83 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~-----~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~--G~L~I~~v~~~D~gg~Y 83 (114)
.+.|+|..+.+|.+|.|.|.+.+. ..+.+.|.|.||+..| ..+||.+... +.|.|.+++.+| |.|
T Consensus 8 ~i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i------~~~~~~~~~~~~~~L~i~~~~~~~--g~Y 79 (303)
T 1i1r_A 8 YISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTI------PKEQYTIINRTASSVTFTDIASLN--IQL 79 (303)
T ss_dssp EEESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEEC------CGGGCEEEETTEEEEEECSCCCSE--EEE
T ss_pred eEccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEEC------ChhheeeeCCcEEEEEEcCcCCCc--eEE
Confidence 478999999999999999999642 0121289999999853 2347766532 479999999985 499
Q ss_pred EEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 84 YCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 84 ~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+|.|.|. +........+.|.+..++
T Consensus 80 ~C~a~~~-g~~~~~~~~~~l~v~~~P 104 (303)
T 1i1r_A 80 TCNILTF-GQLEQNVYGITIISGLPP 104 (303)
T ss_dssp EEEEEET-TTEEEEEEEEEEEEECCC
T ss_pred EEecccC-CCcceEEEEEEEeccCCC
Confidence 9999884 221111224555565443
No 434
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=99.07 E-value=1e-09 Score=72.11 Aligned_cols=94 Identities=17% Similarity=0.273 Sum_probs=62.1
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeeee---------eccCCcEEEcc---C--CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARSI---------IHSGGRYSITT---A--GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~~---------~~~~~r~~v~~---~--G~L~I~ 72 (114)
.+|....+.+|.+|.|.|...+.......+.|+|... .++... ....+||.+.. + ..|.|+
T Consensus 5 ~qp~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (120)
T 1n4x_H 5 QQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQIN 84 (120)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCeEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEEC
Confidence 4567788999999999999853211111789998541 121111 01247998862 2 269999
Q ss_pred ecCCCCCCeeeEEEEeecc--CCcEEeCCCeEEEEe
Q psy9140 73 DTGMEDSYIRYYCQTTHKL--TGERKISPPSQVMVS 106 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l--~~~~~~s~~a~L~V~ 106 (114)
+++.+|+| .|.|.+.+.. .....-...++|.|+
T Consensus 85 ~~~~~DsG-~Y~C~~~~~~~~~~~~~fg~GT~l~V~ 119 (120)
T 1n4x_H 85 NLKNEDTA-TYFCVRDRHDYGEIFTYWGQGTTVTVS 119 (120)
T ss_dssp SCCGGGCE-EEEEEEESSSSSSCEEEECCCEEEEEC
T ss_pred CCCHHHCE-EEEEEEEccccccccceECCCEEEEEe
Confidence 99999995 9999999751 123334557777774
No 435
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.07 E-value=1.9e-10 Score=86.84 Aligned_cols=71 Identities=17% Similarity=0.256 Sum_probs=54.3
Q ss_pred eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeee---------eccCCcEEEcc------CCcEEEeecCCCCCCe
Q psy9140 17 TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSI---------IHSGGRYSITT------AGALHIRDTGMEDSYI 81 (114)
Q Consensus 17 ~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~---------~~~~~r~~v~~------~G~L~I~~v~~~D~gg 81 (114)
..+.+|+++.|.|.+.+.+.+ .+.|+|++..++... ....+||.+.. ++.|.|.+++.+|+|
T Consensus 4 v~~~~G~~v~L~C~~~~~p~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G- 80 (363)
T 1wio_A 4 VLGKKGDTVELTCTASQKKSI--QFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSD- 80 (363)
T ss_dssp EEEETTSCEEECCCCTTCSSC--CEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCE-
T ss_pred EEEeCCCeEEEEEEecCCCce--EEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCE-
Confidence 468899999999998754333 899999987532110 12357887753 567999999999995
Q ss_pred eeEEEEeec
Q psy9140 82 RYYCQTTHK 90 (114)
Q Consensus 82 ~Y~C~a~n~ 90 (114)
.|+|.|.|.
T Consensus 81 ~Y~C~~~n~ 89 (363)
T 1wio_A 81 TYICEVEDQ 89 (363)
T ss_dssp EEEEEETTE
T ss_pred EEEEEEEEC
Confidence 999999996
No 436
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=99.07 E-value=8.9e-10 Score=72.60 Aligned_cols=95 Identities=21% Similarity=0.299 Sum_probs=62.0
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee---------eccCCcEEEcc-----CCcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI---------IHSGGRYSITT-----AGALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~---------~~~~~r~~v~~-----~G~L~I 71 (114)
..+|....+.+|.+|.|.|...+.......+.|+|.. .. ++... ....+||.+.. +..|.|
T Consensus 4 v~qp~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (121)
T 1j05_H 4 LQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQL 83 (121)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEGGGTEEEEEE
T ss_pred EECCCCEEEeCCCcEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcCCCCEEEEEE
Confidence 3457778899999999999985422111279998853 21 11110 01246998852 237999
Q ss_pred eecCCCCCCeeeEEEEeecc---CCcEEeCCCeEEEEe
Q psy9140 72 RDTGMEDSYIRYYCQTTHKL---TGERKISPPSQVMVS 106 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l---~~~~~~s~~a~L~V~ 106 (114)
++++.+|+| .|.|.+.+.. +....-...++|.|.
T Consensus 84 ~~~~~~Dsg-~Y~C~~~~~~~~~~~~~~fg~GT~l~V~ 120 (121)
T 1j05_H 84 TSLTSEDTA-VYYCAPFGYYVSDYAMAYWGQGTSVTVS 120 (121)
T ss_dssp CSCCGGGCE-EEEEEEEBTTTBCSSCCCCCCCEEEEEC
T ss_pred CCCCHHHCE-EEEEEEEcCCCCccccceECCCEEEEec
Confidence 999999995 9999999862 112223447777774
No 437
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.07 E-value=4.6e-10 Score=83.22 Aligned_cols=91 Identities=20% Similarity=0.207 Sum_probs=61.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEE-ccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSI-TTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v-~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
+...|... +.+|.++.|.|.+.+. +..+.|.|++..+... ....+... ..++.|.|.+|+.+|+| .|+|.|.
T Consensus 122 ~~~~~~~~-v~~G~~v~L~C~~~~~---~~~~~w~k~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~a~ 194 (316)
T 3vh8_G 122 LLAHPGPL-VKSGERVILQCWSDIM---FEHFFLHKEGISKDPS--RLVGQIHDGVSKANFSIGPMMLALAG-TYRCYGS 194 (316)
T ss_dssp EEEESCSE-EETTCCEEEEEEESSC---CSEEEEEETTCCSCCE--EEECEEETTEEEEEEEECSCCGGGCE-EEEEEEE
T ss_pred EEecCCCc-cCCCCeEEEEEcCCCC---CcEEEEEECCCccccc--eeeeeecCCCceEEEEECCCChhhCc-eEEEEEe
Confidence 44555444 8999999999999532 1278999999864211 11111111 23578999999999995 9999999
Q ss_pred eccCCc--EEeCCCeEEEEec
Q psy9140 89 HKLTGE--RKISPPSQVMVSE 107 (114)
Q Consensus 89 n~l~~~--~~~s~~a~L~V~~ 107 (114)
|..+.. ...|....|.|.+
T Consensus 195 n~~g~~~~s~~s~~~~l~V~~ 215 (316)
T 3vh8_G 195 VTHTPYQLSAPSDPLDIVVTG 215 (316)
T ss_dssp CTTCTTBCCCCCCCEEEEEEC
T ss_pred cCCCCccccCCCCCEEEEecC
Confidence 987531 1225577788864
No 438
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=99.07 E-value=1.2e-09 Score=72.60 Aligned_cols=93 Identities=26% Similarity=0.337 Sum_probs=62.4
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee---------eccCCcEEEcc-----CCcEE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI---------IHSGGRYSITT-----AGALH 70 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~---------~~~~~r~~v~~-----~G~L~ 70 (114)
...+|....+.+|.+|.|.|...+.......+.|+|.. . .++... ....+||.+.. +..|.
T Consensus 5 ~v~qp~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (121)
T 2xt1_B 5 QLVESGGGLVQAGGSLRLSCAASGSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQ 84 (121)
T ss_dssp EEEEECCEEEETTCCEEEEEEEESSSCCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEEcCCCEEEeCCCCEEEEEEecCeeccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeCCCCEEEEE
Confidence 34567788999999999999985422111179999943 2 122111 01247998853 23799
Q ss_pred EeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
|++++.+|+| .|.|.+. .+ .-...++|.|+..
T Consensus 85 I~~v~~~DsG-~Y~C~~~-~~----~fg~Gt~l~v~~~ 116 (121)
T 2xt1_B 85 MNDLKPEDTA-MYYCKAS-GS----SWGQGTQVTVSSH 116 (121)
T ss_dssp ECSCCGGGCE-EEEEEET-TC----CCCCCEEEEEEC-
T ss_pred ECCCCHHHCE-EEEEEEE-eC----EECCCEEEEEecc
Confidence 9999999995 9999997 22 1355778888754
No 439
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.07 E-value=7.5e-10 Score=79.77 Aligned_cols=96 Identities=17% Similarity=0.198 Sum_probs=63.5
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee--------eccCCcEEEcc---CC--cEEEe
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI--------IHSGGRYSITT---AG--ALHIR 72 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~--------~~~~~r~~v~~---~G--~L~I~ 72 (114)
..+|....+.+|.+|.|.|.+.+.......+.|+|.+ .. +++.. ....+||.+.. ++ .|.|+
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (232)
T 1dn0_B 4 LQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLS 83 (232)
T ss_dssp EEEECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EECCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEEC
Confidence 3467778999999999999986542111279999853 21 11100 01257998863 22 79999
Q ss_pred ecCCCCCCeeeEEEEeeccC--C-cEEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLT--G-ERKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~--~-~~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|.|.+.+.-+ . ....+..++|.|..
T Consensus 84 ~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~ 120 (232)
T 1dn0_B 84 SVTAADTA-VYYCARPPHDTSGHYWNYWGQGTLVTVSS 120 (232)
T ss_dssp SCCGGGCE-EEEEEECSSTTSCSCCSEECCCEEEEECS
T ss_pred CCCcccCE-EEEEEEecCCcCCchhhhcccceEEEEcc
Confidence 99999995 99999994211 1 11234567888875
No 440
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.07 E-value=9.5e-10 Score=81.45 Aligned_cols=96 Identities=20% Similarity=0.323 Sum_probs=65.6
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee---------eccCCcEEEcc-----CCcEEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI---------IHSGGRYSITT-----AGALHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~---------~~~~~r~~v~~-----~G~L~I 71 (114)
..+|+...+.+|.+|.|.|.+.++......+.|+|.+ ..+ ++.. ....+||.+.. +..|.|
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (257)
T 3bn9_D 4 LVQSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQM 83 (257)
T ss_dssp EEEECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EEccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEE
Confidence 3567788899999999999986542111279999864 111 1100 01257998864 247999
Q ss_pred eecCCCCCCeeeEEEEeeccC----------CcEEeCCCeEEEEec
Q psy9140 72 RDTGMEDSYIRYYCQTTHKLT----------GERKISPPSQVMVSE 107 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l~----------~~~~~s~~a~L~V~~ 107 (114)
++|+.+|+| .|.|.+.|..+ .....+..+.|.|..
T Consensus 84 ~~v~~~DsG-~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~ 128 (257)
T 3bn9_D 84 SSLRAEDTA-VYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSS 128 (257)
T ss_dssp ESCCGGGCE-EEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECS
T ss_pred CCCChhhCE-EEEEEEecCCCcccccccccceeeeeCCcEEEEecC
Confidence 999999995 99999998653 111344567899975
No 441
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=99.07 E-value=1.3e-09 Score=71.09 Aligned_cols=93 Identities=22% Similarity=0.340 Sum_probs=62.1
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeeee---------ccCCcEEEccC-----CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSII---------HSGGRYSITTA-----GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~~---------~~~~r~~v~~~-----G~L~I~ 72 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. .. ++.... ...+||.+..+ ..|.|+
T Consensus 5 ~qp~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (117)
T 2yc1_A 5 VESGGGLVQPGGSLRLSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMN 84 (117)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred EcCCCEEEcCCCeEEEEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEEC
Confidence 457778899999999999985321111178999853 21 111110 12479988632 279999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEe
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVS 106 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~ 106 (114)
+++.+|+| .|.|.+.+.. ....-...++|.|.
T Consensus 85 ~~~~~Dsg-~Y~C~~~~~~-~~~~fg~GT~l~V~ 116 (117)
T 2yc1_A 85 SLRAEDTA-VYYCARGGVG-SFDTWGQGTMVTVS 116 (117)
T ss_dssp SCCGGGCE-EEEEEEEETT-EEEEECCCEEEEEC
T ss_pred CCCHHHCE-EEEEEEEeCC-CceEECCCEEEEEc
Confidence 99999995 9999999751 22334567788774
No 442
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=99.06 E-value=1.1e-09 Score=71.52 Aligned_cols=91 Identities=18% Similarity=0.239 Sum_probs=59.0
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee------ec--cCCcEEEccC---CcEEEeecCC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI------IH--SGGRYSITTA---GALHIRDTGM 76 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~------~~--~~~r~~v~~~---G~L~I~~v~~ 76 (114)
+|....+.+|.+|.|.|...+.. +...+.|+|.. . .++... .. -.+||.+..+ ..|.|++++.
T Consensus 7 qp~~~~~~~G~~v~L~C~~~~~~-~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~ 85 (115)
T 2otu_A 7 QSSSASFSLGASAKLTCTLSSQH-STYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQP 85 (115)
T ss_dssp ECCCEECCTTCCEEEEEEECGGG-TTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cCCCEEECCCCCEEEEEEecCCC-CCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccCCEEEEEECCCCh
Confidence 37788899999999999985431 11178999842 1 222110 01 1469988642 3699999999
Q ss_pred CCCCeeeEEEEeeccCC--cEEeCCCeEEEE
Q psy9140 77 EDSYIRYYCQTTHKLTG--ERKISPPSQVMV 105 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~--~~~~s~~a~L~V 105 (114)
+|+| .|.|.+.+...+ ...-...++|.|
T Consensus 86 ~Dsg-~Y~C~~~~~~~~~~~~~fg~GT~l~V 115 (115)
T 2otu_A 86 EDEA-IYICGVGDTIKEQFVYVFGGGTKVTV 115 (115)
T ss_dssp GGCE-EEEEEEEECCTTSCEEEECCCEEEEC
T ss_pred hHCE-EEEEEEecCCCCcceeEECCCEEecC
Confidence 9995 999999975321 123344555543
No 443
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.06 E-value=1e-10 Score=81.90 Aligned_cols=81 Identities=20% Similarity=0.336 Sum_probs=54.4
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee------eeccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS------IIHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~------~~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
+.+.+.+.+..+.+|..+.|.|.+.++.++++.++|+||+..+... ....++.|.+. ..|.|..++.+|+|
T Consensus 116 P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~g- 192 (212)
T 1q0x_L 116 PTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMAS--SYLTLTARAWERHS- 192 (212)
T ss_dssp CEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEE--EEEEEEHHHHTTCC-
T ss_pred CeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEE--EEEEEcHHHccCCC-
Confidence 3344544444556799999999997644332379999999865210 01122333332 46999999999995
Q ss_pred eeEEEEeecc
Q psy9140 82 RYYCQTTHKL 91 (114)
Q Consensus 82 ~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 193 ~Y~C~a~n~~ 202 (212)
T 1q0x_L 193 SYSCQVTHEG 202 (212)
T ss_dssp EEEEEEEETT
T ss_pred cEEEEEEeCC
Confidence 9999999963
No 444
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=99.06 E-value=1.7e-09 Score=71.36 Aligned_cols=94 Identities=20% Similarity=0.314 Sum_probs=62.4
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee--------ccCCcEEEccC-----CcEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII--------HSGGRYSITTA-----GALHIRD 73 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~--------~~~~r~~v~~~-----G~L~I~~ 73 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .++.... ...+||.+..+ ..|.|++
T Consensus 5 ~q~~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (121)
T 1kxv_C 5 VESGGGTVPAGGSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDS 84 (121)
T ss_dssp EEECCEEECTTCCEEEEEEEESCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECS
T ss_pred EcCCCEEEcCCCcEEEEEEecCCCcCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECC
Confidence 456678899999999999985432111279999863 1 1221110 12479988632 2699999
Q ss_pred cCCCCCCeeeEEEEeecc----CCcEEeCCCeEEEEe
Q psy9140 74 TGMEDSYIRYYCQTTHKL----TGERKISPPSQVMVS 106 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l----~~~~~~s~~a~L~V~ 106 (114)
++.+|+| .|.|.+.+.. .....-...++|.|+
T Consensus 85 ~~~~Dsg-~Y~C~~~~~~~~~~~~~~~fg~GT~L~V~ 120 (121)
T 1kxv_C 85 LKPDDTA-MYYCKPSLRYGLPGCPIIPWGQGTQVTVS 120 (121)
T ss_dssp CCGGGCE-EEEEEEEESSCCTTCCCCCCCCCEEEEEC
T ss_pred CCHHHCE-EEEEEEEecCCccccccceECCCEEEEec
Confidence 9999995 9999999852 122233457788774
No 445
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=99.05 E-value=2e-09 Score=71.11 Aligned_cols=94 Identities=23% Similarity=0.373 Sum_probs=61.9
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee---------ccCCcEEEccC-----CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII---------HSGGRYSITTA-----GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~---------~~~~r~~v~~~-----G~L~I~ 72 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .++.... ...+||.+..+ ..|.|+
T Consensus 7 ~q~~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (123)
T 2p45_B 7 VESGGGLVQAGGSLRLSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRDKGKNTVYLQMD 86 (123)
T ss_dssp EEECCEEEETTCCEEEEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECCTTSSEEEEEES
T ss_pred EccCCEEEeCCCCEEEEEEecCccCcCcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEeCCCCEEEEEEC
Confidence 456678899999999999985422111279999853 2 1221110 12479998632 269999
Q ss_pred ecCCCCCCeeeEEEEeecc---CCcEEeCCCeEEEEe
Q psy9140 73 DTGMEDSYIRYYCQTTHKL---TGERKISPPSQVMVS 106 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l---~~~~~~s~~a~L~V~ 106 (114)
+++.+|+| .|.|.+.+.. +....-...++|.|.
T Consensus 87 ~~~~~Dsg-~Y~C~~~~~~~~~~~~~~fg~GT~l~V~ 122 (123)
T 2p45_B 87 SLKPEDTA-TYYCAAGGYELRDRTYGQWGQGTQVTVS 122 (123)
T ss_dssp SCCGGGCE-EEEEEESSCTTCGGGCCEECCCEEEEEE
T ss_pred CCCHHHCE-EEEEEEEecCCCccccceeCCCEEEEec
Confidence 99999995 9999998741 122234557788775
No 446
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.05 E-value=5.7e-10 Score=84.22 Aligned_cols=88 Identities=19% Similarity=0.268 Sum_probs=62.6
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTH 89 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n 89 (114)
+...+....+.+|.+|.|.|.+.+...+ ..|.|++++..+ . ....|+.. .+|+|.|.+|+.+|+| .|+|.+
T Consensus 9 ~~~p~~~v~~~~G~~v~l~C~~~~~~~~-~~i~W~~~~~~~---~-~~~~~~~~-~~~~L~i~~v~~~d~G-~Y~C~~-- 79 (325)
T 1n26_A 9 QEVARGVLTSLPGDSVTLTCPGVEPEDN-ATVHWVLRKPAA---G-SHPSRWAG-MGRRLLLRSVQLHDSG-NYSCYR-- 79 (325)
T ss_dssp CCCCTTEEEECTTCCEEEECTTSCTTCC-SEEEEEEECSSS---S-CCCEEEEE-ESSEEEECSCCGGGCE-EEEEES--
T ss_pred cccCCCcEECCCCCcEEEEeCCCCCCCC-ceEEEEECCccC---C-cccccccc-ccceEEecccchhhCe-EeEEEe--
Confidence 4444444555799999999998653211 289999988753 1 12345654 4799999999999995 999993
Q ss_pred ccCCcEEeCCCeEEEEecccc
Q psy9140 90 KLTGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 90 ~l~~~~~~s~~a~L~V~~~~~ 110 (114)
. +. .+..+.|.|.+|+.
T Consensus 80 -~-g~--~~~~~~L~V~~pP~ 96 (325)
T 1n26_A 80 -A-GR--PAGTVHLLVDVPPE 96 (325)
T ss_dssp -S-SS--CSCEEEEEECCCCC
T ss_pred -C-CE--EeeeEEEEeccCCC
Confidence 2 32 56679999987654
No 447
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.05 E-value=3.1e-10 Score=77.60 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=57.3
Q ss_pred ceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCCc
Q psy9140 15 GNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTGE 94 (114)
Q Consensus 15 ~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~~ 94 (114)
....|.+|+++.|.|.+.+.+.+...+.|+|++..+ ..+.++. .+..|.|. +.+|+ |.|+|.|.|.
T Consensus 6 ~~~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l-----~~~~~~~--~~~~l~i~--~~~d~-G~Y~C~~~n~---- 71 (184)
T 3b5h_A 6 FTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVL-----KEDALPG--QKTEFKVD--SDDQW-GEYSCVFLPE---- 71 (184)
T ss_dssp EEEEEEETTEEEEEEEEESCSSCCCEEEEESSSEEE-----ECTTCCC--SEEEEEEC--GGGCC-EEEEEEEEST----
T ss_pred EEEEEecCCCEEEEEECCCCCCCceEEEEEeCCEEe-----ecccccC--CcEEEEEe--chhhC-eEEEEEEECC----
Confidence 456789999999999986654432289999999864 2222221 13467777 68999 5999999983
Q ss_pred EEeCCCeEEEEeccccc
Q psy9140 95 RKISPPSQVMVSEIALP 111 (114)
Q Consensus 95 ~~~s~~a~L~V~~~~~~ 111 (114)
.+..+.|.|..++.+
T Consensus 72 --~~~~~~l~V~~~P~~ 86 (184)
T 3b5h_A 72 --PMGTANIQLHGPPRV 86 (184)
T ss_dssp --TSCEEEEEECCSCCC
T ss_pred --cCcEEEEEEecCCce
Confidence 245678888876655
No 448
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=99.05 E-value=9.3e-10 Score=72.28 Aligned_cols=94 Identities=23% Similarity=0.346 Sum_probs=61.6
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee---------ccCCcEEEccC-----CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII---------HSGGRYSITTA-----GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~---------~~~~r~~v~~~-----G~L~I~ 72 (114)
.+|....+.+|.+|.|.|.+.+.......+.|+|.. . .++.... ...+||.+..+ ..|.|+
T Consensus 5 ~qp~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (120)
T 3b9v_A 5 VESGGGLVQPGGSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMN 84 (120)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEeCCccEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCCCCEEEEEEC
Confidence 457778899999999999985321111179999853 2 1221110 12469988632 379999
Q ss_pred ecCCCCCCeeeEEEEeecc--CCcEEeCCCeEEEEe
Q psy9140 73 DTGMEDSYIRYYCQTTHKL--TGERKISPPSQVMVS 106 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l--~~~~~~s~~a~L~V~ 106 (114)
+++.+|+| .|.|.+.+.. ++...-...++|.|+
T Consensus 85 ~~~~~Dsg-~Y~C~~~~~~~~~~~~~fg~GT~l~V~ 119 (120)
T 3b9v_A 85 SLRAEDTA-VYYCARWGGDGFYAMDYWGQGTLVTVS 119 (120)
T ss_dssp SCCGGGCE-EEEEEEECTTSSBCCSSCCCCEEEEEC
T ss_pred CCCHHHCE-EEEEEEEcCCCccccceECCCEEEEec
Confidence 99999995 9999998752 112123457777774
No 449
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=99.05 E-value=9.3e-10 Score=72.32 Aligned_cols=81 Identities=21% Similarity=0.234 Sum_probs=54.1
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeC--Cee--ee-e-eee------ccCCcEEEcc----CCcEEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLRE--GVS--EA-R-SII------HSGGRYSITT----AGALHI 71 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd--~~~--~~-~-~~~------~~~~r~~v~~----~G~L~I 71 (114)
+....|....+.+|.+|.|+|...+...... .+.|.|. +.. ++ . ... .-.+|+.+.. +.+|.|
T Consensus 3 ~v~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 82 (119)
T 2pnd_A 3 PTLKTPESVTGTWKGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRLKVSHKVPGDVSLQI 82 (119)
T ss_dssp CCCBCCSEEEEETTSCEEECCBCCCCTTCEEEEEEEEEEETTEEEEEEEEETTEEECCSGGGTTTEEECCSSTTBCCEEE
T ss_pred ccccCCceEEEEcCCcEEEEEEEcCCCCCCceEEEEEEeCCCCceEEEEEcCCCceeecccccCcEEEccCCCCCEEEEE
Confidence 3344677889999999999999754222222 5799985 211 11 1 000 1146777642 457999
Q ss_pred eecCCCCCCeeeEEEEeec
Q psy9140 72 RDTGMEDSYIRYYCQTTHK 90 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~ 90 (114)
++++.+|+| .|.|.+.+.
T Consensus 83 ~~v~~~D~G-~Y~C~v~~~ 100 (119)
T 2pnd_A 83 NTLQMDDRN-HYTCEVTWQ 100 (119)
T ss_dssp SSCCGGGCE-EEEEEEEEE
T ss_pred ccCCcccCE-EEEEEEEEC
Confidence 999999995 999999874
No 450
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.05 E-value=5.3e-11 Score=84.49 Aligned_cols=80 Identities=19% Similarity=0.315 Sum_probs=51.7
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
.+.+.+.+..+.+|+++.|.|.+.++.++++.++|+||+..+... ....++.|.+. ..|.|..++.+|+|
T Consensus 136 ~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~g- 212 (233)
T 3bqu_C 136 TVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS--STLTLTKDEYERHN- 212 (233)
T ss_dssp EEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEE--EEEEEEHHHHHTCC-
T ss_pred EEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEE--EEEEECHHHhCCCC-
Confidence 344444444455799999999997643222279999999864211 01234455443 57999999999995
Q ss_pred eeEEEEeecc
Q psy9140 82 RYYCQTTHKL 91 (114)
Q Consensus 82 ~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 213 ~Y~C~a~n~~ 222 (233)
T 3bqu_C 213 SYTCEATHKT 222 (233)
T ss_dssp CEEEEEEEC-
T ss_pred CEEEEEEeCC
Confidence 9999999963
No 451
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.05 E-value=6.1e-11 Score=84.03 Aligned_cols=82 Identities=21% Similarity=0.367 Sum_probs=54.9
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeee------eccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSI------IHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~------~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
+.+.+.+.+..+.+|+++.|.|.+.++.++++.++|+||+..+.... ...++.|.+ .+.|.|.+++.+|+|
T Consensus 136 p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~G- 212 (234)
T 2j6e_L 136 PSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAA--SSYLSLTPEQWKSHR- 212 (234)
T ss_dssp CCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBC--CEEECCCGGGTTTSC-
T ss_pred CcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEE--EEEEEECHHHcCCCC-
Confidence 33444444444567999999999976543323899999998652100 012233322 246999999999995
Q ss_pred eeEEEEeeccC
Q psy9140 82 RYYCQTTHKLT 92 (114)
Q Consensus 82 ~Y~C~a~n~l~ 92 (114)
.|+|.|.|...
T Consensus 213 ~Y~C~a~n~~~ 223 (234)
T 2j6e_L 213 SYSCQVTHEGS 223 (234)
T ss_dssp CEEEEEEBTTB
T ss_pred eEEEEEEeCCC
Confidence 99999999743
No 452
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.04 E-value=7.9e-10 Score=81.20 Aligned_cols=94 Identities=19% Similarity=0.307 Sum_probs=61.5
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeeee---------ccCCcEEEcc-----CCcEEEeec
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSII---------HSGGRYSITT-----AGALHIRDT 74 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~~---------~~~~r~~v~~-----~G~L~I~~v 74 (114)
+....+.+|++|.|.|.+.+.......+.|+|++ .. ++.... ..++||.+.. ++.|.|.++
T Consensus 145 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 224 (264)
T 2gjj_A 145 SGPEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSL 224 (264)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcC
Confidence 3445799999999999996543211289999973 21 111000 1156887642 458999999
Q ss_pred CCCCCCeeeEEEEeec--cCCcEEeCCCeEEEEecc
Q psy9140 75 GMEDSYIRYYCQTTHK--LTGERKISPPSQVMVSEI 108 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~--l~~~~~~s~~a~L~V~~~ 108 (114)
+.+|+| .|.|.|.|. +.....-...+.|.|+.+
T Consensus 225 ~~~DsG-~Y~C~a~n~~~~~~~~~fg~gt~l~v~~~ 259 (264)
T 2gjj_A 225 TSEDSA-DYYCVRSGNYEEYAMDYWGQGTSVTVSSH 259 (264)
T ss_dssp CGGGCE-EEEEEEECSGGGCSCCCBCCCEEEEEC--
T ss_pred CcccCE-EEEEEEecCCCCcceEEECCCEEEEEecc
Confidence 999995 999999995 122112356789998864
No 453
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.04 E-value=1.1e-09 Score=78.48 Aligned_cols=94 Identities=18% Similarity=0.326 Sum_probs=62.7
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee---------eccCCcEEEccCCc-----EEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI---------IHSGGRYSITTAGA-----LHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~---------~~~~~r~~v~~~G~-----L~I~ 72 (114)
.+|....|.+|.+|.|.|.+.++..+...+.|+|.. .. ++... ....+||.+..++. |.|+
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (230)
T 3n9g_H 5 VQSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELS 84 (230)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 456678899999999999985422121278999742 11 11100 11247999875554 9999
Q ss_pred ecCCCCCCeeeEEEEeecc-----CCcEEeCCCeEEEEe
Q psy9140 73 DTGMEDSYIRYYCQTTHKL-----TGERKISPPSQVMVS 106 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l-----~~~~~~s~~a~L~V~ 106 (114)
+++.+|+| .|.|.+.+.. +.....+..+.|.|.
T Consensus 85 ~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~ 122 (230)
T 3n9g_H 85 SLRSEDTA-VYYCARDWGSNYVWGSYPKYWGQGTLVTVS 122 (230)
T ss_dssp SCCGGGCE-EEEEEEECCCSSSTTCCEEEECCCEEEEEC
T ss_pred CCChhhCE-EEEEEEccCCCCcccccccccCCCEEEEEE
Confidence 99999995 9999999853 112234557788885
No 454
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=99.04 E-value=2.3e-09 Score=71.57 Aligned_cols=96 Identities=22% Similarity=0.291 Sum_probs=63.3
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee--------eccCCcEEEcc-----CCcEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI--------IHSGGRYSITT-----AGALHIRD 73 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~--------~~~~~r~~v~~-----~G~L~I~~ 73 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .|+... ....+||.+.. +..|.|++
T Consensus 5 ~qp~~~~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~ 84 (124)
T 1yc7_A 5 VESGGGSVQAGGSLRLSCAVSGSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDNAKNTVYLQMNS 84 (124)
T ss_dssp EEECCEEECTTCCEEEEEEEESCCSSCEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred ECCCCEEEecCCCEEEEEEEeCCCcCCCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECC
Confidence 456778899999999999985322111279999853 1 111111 01146998863 22699999
Q ss_pred cCCCCCCeeeEEEEeec-cCCcEEeCCCeEEEEecc
Q psy9140 74 TGMEDSYIRYYCQTTHK-LTGERKISPPSQVMVSEI 108 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~-l~~~~~~s~~a~L~V~~~ 108 (114)
++.+|+| .|.|.+.+. .+....-...++|.|+.+
T Consensus 85 ~~~~Dsg-~Y~C~~~~~~~~~~~~fG~GT~l~v~~~ 119 (124)
T 1yc7_A 85 LQREDTG-MYYCQIQCGVRSIREYWGQGTQVTVSSH 119 (124)
T ss_dssp CCGGGCE-EEEEEEEECSSSCEEEECCCEEEEEC--
T ss_pred CCHHHCE-EEEEEEEeCCCcccceECCCEEEEEecc
Confidence 9999995 999999975 112334466889988854
No 455
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.04 E-value=6.8e-11 Score=82.78 Aligned_cols=80 Identities=20% Similarity=0.376 Sum_probs=54.7
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeee-----eeeccCCcEEEccCCcEEEeecCCCCCCeeeE
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEAR-----SIIHSGGRYSITTAGALHIRDTGMEDSYIRYY 84 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~-----~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~ 84 (114)
+.+.+....+..|+.+.|.|.+.++.++++.++|+||+..+.. .....+++|.+. ..|.|..++.+|+| .|+
T Consensus 124 ~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--s~l~i~~~~~~d~g-~Y~ 200 (218)
T 3s96_B 124 LTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMAS--SFLHLTSDQWRSHN-SFT 200 (218)
T ss_dssp EEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEE--EEEEEEHHHHHTCS-CEE
T ss_pred EEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEE--EEEEEeHHHccCCC-eEE
Confidence 4455555566789999999999663222227999999987521 011125667664 56999999999995 999
Q ss_pred EEEeeccC
Q psy9140 85 CQTTHKLT 92 (114)
Q Consensus 85 C~a~n~l~ 92 (114)
|.|.|..+
T Consensus 201 C~a~n~~~ 208 (218)
T 3s96_B 201 CQVTHEGD 208 (218)
T ss_dssp EEEEETTE
T ss_pred EEEEeCCC
Confidence 99999753
No 456
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.04 E-value=2.4e-10 Score=80.28 Aligned_cols=92 Identities=17% Similarity=0.271 Sum_probs=59.3
Q ss_pred eeeccceeEEEeCCeE-EEEeec-CCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccC------------CcEEEeecC
Q psy9140 10 YEINTGNTFVLRGNIA-VLQCNI-PAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTA------------GALHIRDTG 75 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~A-vL~C~~-~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~------------G~L~I~~v~ 75 (114)
+...+.+..+.+|..+ .|.|.+ .+++.+ .++|+|++..+... .....|+.+..+ +.|.|....
T Consensus 121 ~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p--~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~ 197 (231)
T 2pet_A 121 VSPNKGTLSVMEDSAQEIATCNSRNGNPAP--KITWYRNGQRLEVP-VEMNPEGYMTSRTVREASGLLSLTSTLYLRLRK 197 (231)
T ss_dssp EEECCSSCCTTCCSEEEEEEEEEEEEBSCC--EEEEEETTEECCCC-SSCCSSEEEEEEEEECTTSCEEEEEEEEEECCG
T ss_pred EecCCcceeecCCCceEEEEEEeECcccCC--EEEEEECCccCccc-cccccceeecceeEecCCCeEEEEEEEEEecch
Confidence 4556666678899988 999998 665444 89999999865211 111246655431 568887555
Q ss_pred CCCCCeeeEEEEeeccCC--cEE-eCCCeEEEE
Q psy9140 76 MEDSYIRYYCQTTHKLTG--ERK-ISPPSQVMV 105 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~--~~~-~s~~a~L~V 105 (114)
.+|. |.|+|.|.|.+.. ... .|...+|.|
T Consensus 198 ~dd~-g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 198 DDRD-ASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp GGGG-CEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred hhCC-ceEEEEEEcCCcccccccccccceEEEE
Confidence 5557 5999999996321 112 444555554
No 457
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.04 E-value=5e-10 Score=77.72 Aligned_cols=67 Identities=16% Similarity=0.249 Sum_probs=47.9
Q ss_pred EeCCeEEEEeecC-CCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcE-E---EeecCCCCCCeeeEEEEeeccCC
Q psy9140 20 LRGNIAVLQCNIP-AYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGAL-H---IRDTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 20 ~~G~~AvL~C~~~-~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L-~---I~~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
..|+.+.|.|.+. +++.| .++|+||+..+. ..+.++...++|.| . +..++.+|. |.|+|.|.|..+.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p--~i~W~k~g~~l~----~~~~~~~~~~~~~~~~~~~~~~v~~~d~-g~Y~C~a~n~~~~ 190 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEP--HLSWLENGEELN----AINTTVSQDPETELYAVSSKLDFNMTTN-HSFMCLIKYGHLR 190 (201)
T ss_dssp SSTTEEEEEEEEEEESSCE--EEEEEESSCEEC----CSEEEEEECTTTCCEEEEEEEEEETTSC-EEEEEEEEETTCC
T ss_pred CCCCeEEEEEecCCccCCC--EEEEEECCEECc----cccceEEecCCCcEEEEEEEEEEEecCC-CEEEEEEecCcce
Confidence 4588999999994 66554 899999988641 22345656555444 2 346678898 5999999998653
No 458
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.04 E-value=2.8e-11 Score=84.83 Aligned_cols=79 Identities=19% Similarity=0.296 Sum_probs=55.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeee------eccCCcEEEccCCcEEEeecCCCCCCeee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSI------IHSGGRYSITTAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~------~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y 83 (114)
+.+.+....+.+|.++.|.|.+.++.++.+.++|+||+..+.... ...++ |.+. +.|.|.+++.+|+| .|
T Consensus 116 v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~-~~~~--s~L~i~~~~~~d~G-~Y 191 (212)
T 1nfd_E 116 VTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQN-YMTS--SYLSLTADQWKSHN-RV 191 (212)
T ss_dssp EECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSC-EEEE--EBCCEEHHHHHTCS-CE
T ss_pred EEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCC-ceEE--EEEEEchhhcCCCC-eE
Confidence 444444445668999999999976532212899999998652110 01233 5443 67999999999995 99
Q ss_pred EEEEeeccC
Q psy9140 84 YCQTTHKLT 92 (114)
Q Consensus 84 ~C~a~n~l~ 92 (114)
+|.|.|...
T Consensus 192 ~C~a~n~~~ 200 (212)
T 1nfd_E 192 SCQVTHEGE 200 (212)
T ss_dssp EEEEECTTT
T ss_pred EEEEEeCCc
Confidence 999999754
No 459
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.03 E-value=3.5e-10 Score=80.00 Aligned_cols=72 Identities=11% Similarity=0.329 Sum_probs=52.6
Q ss_pred eEEEeCCeEEEEeecCCC-CCCcceEEEeeCCeeeee---eeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccC
Q psy9140 17 TFVLRGNIAVLQCNIPAY-NHNLLLIAWLREGVSEAR---SIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 17 ~~v~~G~~AvL~C~~~~~-~~~~~~vsW~kd~~~~~~---~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~ 92 (114)
..+.+|..+.|.|.+.++ +++ +.++|.|++..+.. +....++.|.+. +.|.|.+++.+| | .|+|.|.|..+
T Consensus 137 ~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d-g-~y~C~a~n~~~ 211 (222)
T 1q9r_B 137 SAAQTNSMVTLGCLVKGYFPEP-VTVTWNSGSLSSGVHTFPAVLQSDLYTLS--SSVTVPSSTWPS-E-TVTCNVAHPAS 211 (222)
T ss_dssp SCCCCSSEEEEEEEEEEEBSSC-CEEEEGGGTBCTTEEEEEEEEETTEEEEE--EEEEEETTTTTT-S-CCEEEEEEGGG
T ss_pred ccccCCCcEEEEEEEccEECCC-CEEEEecCCeEcceEeccccccCCcEEEE--EEEEECchhcCC-C-eEEEEEEccCC
Confidence 346689999999999764 332 27999999875421 111134466553 689999999999 6 99999999876
Q ss_pred C
Q psy9140 93 G 93 (114)
Q Consensus 93 ~ 93 (114)
.
T Consensus 212 ~ 212 (222)
T 1q9r_B 212 S 212 (222)
T ss_dssp T
T ss_pred C
Confidence 4
No 460
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=99.03 E-value=4.4e-09 Score=72.00 Aligned_cols=96 Identities=17% Similarity=0.258 Sum_probs=65.5
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee-----eccCCcEEEc--c---CCcEEEeecC
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI-----IHSGGRYSIT--T---AGALHIRDTG 75 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~-----~~~~~r~~v~--~---~G~L~I~~v~ 75 (114)
+..|....+.+|.+|.|.|........+ .+.|+|.. .. |+... ....+||.+. + +..|.|++++
T Consensus 4 ~Q~p~~v~v~~G~~vtL~C~~s~~~~~~-~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~ 82 (142)
T 2ol3_A 4 TQTQTSISVMEKTTVTMDCVYETQDSSY-FLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQ 82 (142)
T ss_dssp BCCCSEEEEETTCCEEECCBCCCCCSSC-EEEEEEECTTCCEEEEEEEETTCSSCCEETTEEECCBGGGTBCCEEECSCC
T ss_pred EecCCeEEEecCCCEEEEEEecCCcCCc-eEEEEEeCCCCCcEEEEEECCCCcccccCCCEEEEecCCCCEEEEEECCCC
Confidence 4457788999999999999985432122 68999853 21 22111 0125799984 2 3379999999
Q ss_pred CCCCCeeeEEEEeecc---CCcEEeCCCeEEEEecc
Q psy9140 76 MEDSYIRYYCQTTHKL---TGERKISPPSQVMVSEI 108 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l---~~~~~~s~~a~L~V~~~ 108 (114)
.+|+| .|.|.+.+.. .....-...++|.|...
T Consensus 83 ~~Dsg-~Y~C~~~~~~~~~~~~~~fg~GT~L~V~~~ 117 (142)
T 2ol3_A 83 IEDSA-VYFCAMRGDYGGSGNKLIFGTGTLLSVKPG 117 (142)
T ss_dssp TTTCE-EEEEEEECSSSSCSSCEEECCCEEEEEECC
T ss_pred hhhCE-EEEEEEEcCcCCcccccEECCCEEEEEecC
Confidence 99995 9999998732 12334566889999853
No 461
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=99.03 E-value=2.8e-10 Score=74.23 Aligned_cols=90 Identities=23% Similarity=0.322 Sum_probs=56.0
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee--------ccCCcEEEccC-----CcEEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII--------HSGGRYSITTA-----GALHIRD 73 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~--------~~~~r~~v~~~-----G~L~I~~ 73 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .++.... ...+||.+..+ ..|.|++
T Consensus 5 ~q~~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (114)
T 1sjv_A 5 QESGGGLVQAGESLKLSCAASGNTFSGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRDNAKKTVYLEMNS 84 (114)
T ss_dssp ---CCCCCCTTCCEEEEECCCC-----CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEECTTTCCEEEEECS
T ss_pred ECCCCEEEcCCCCEEEEEEEcCccccCCeEEEEEECCCCCCEEEEEEcCCCcceeCcccCCcEEEEEeCCCCEEEEEECC
Confidence 456677899999999999985432111178999853 1 1211000 12479988632 3699999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEE
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMV 105 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V 105 (114)
++.+|+| .|.|.+.+. ...-...++|.|
T Consensus 85 ~~~~DsG-~Y~C~~~~~---~~~fg~GT~l~V 112 (114)
T 1sjv_A 85 LEPEDTA-VYYCYTHYF---RSYWGQGTQVTV 112 (114)
T ss_dssp CCGGGCS-EEEEEECCC---CCCCCCCCCCCC
T ss_pred CCHHHCE-EEEEeEEcC---cceECCCEEEEe
Confidence 9999996 999999872 212233555554
No 462
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.02 E-value=3.4e-09 Score=76.77 Aligned_cols=97 Identities=25% Similarity=0.414 Sum_probs=66.5
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeee-ee---eccCCcEEEcc-----CCcEEEee
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEAR-SI---IHSGGRYSITT-----AGALHIRD 73 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~-~~---~~~~~r~~v~~-----~G~L~I~~ 73 (114)
+..+..|....+.+|.+|.|.|.+.+...+ .+.|+|.. . .+++ .. ....+||.+.. +..|.|++
T Consensus 4 ~~v~Q~p~~~~v~~G~svtL~C~~s~~~~~--~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~ 81 (210)
T 2eys_A 4 NQVEQSPQSLIILEGKNCTLQCNYTVSPFS--NLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITA 81 (210)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEECCSSCC--EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESS
T ss_pred CeEEEeCCEEEEecCCCEEEEEEECCCCCC--eEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEcc
Confidence 344555888999999999999998554333 78998853 2 2221 00 11268999852 23799999
Q ss_pred cCCCCCCeeeEEEEeecc--CCcEEeCCCeEEEEec
Q psy9140 74 TGMEDSYIRYYCQTTHKL--TGERKISPPSQVMVSE 107 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l--~~~~~~s~~a~L~V~~ 107 (114)
++.+|+| .|.|.+.+.. .........++|.|..
T Consensus 82 ~~~~Dsg-~Y~C~~~~~~~~~~~~~fg~gt~L~V~~ 116 (210)
T 2eys_A 82 SQLSDSA-SYICVVSDRGSTLGRLYFGRGTQLTVWP 116 (210)
T ss_dssp CCGGGCE-EEEEEEESCSSTTCCEEECCCEEEEEEC
T ss_pred CCcccCc-eEEEEEEccCCCcccceECCCEEEEEEC
Confidence 9999994 9999998742 1222344567888874
No 463
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=99.02 E-value=5.6e-09 Score=69.33 Aligned_cols=93 Identities=16% Similarity=0.229 Sum_probs=63.8
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee-------ccCCcEEEcc--C--CcEEEeec
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII-------HSGGRYSITT--A--GALHIRDT 74 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~-------~~~~r~~v~~--~--G~L~I~~v 74 (114)
...|....+.+|.+|.|.|.... .. ..+.|+|.. . .++.... ...+||.+.. + ..|.|+++
T Consensus 5 ~q~p~~v~v~~G~~vtL~C~~~~--~~-~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v 81 (121)
T 2oi9_C 5 TQSPRNKVAVTGEKVTLSCNQTN--NH-NNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASRPSQENFSLTLESA 81 (121)
T ss_dssp EEECSEEEEETTCCEEEEEEESS--CC-SEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEECCSSSEEEEEESSC
T ss_pred EeCCCeEEecCCCcEEEEEEecC--CC-CeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEcCCCCEEEEEECCC
Confidence 44578889999999999999632 11 279999853 1 1211100 1147998752 2 36999999
Q ss_pred CCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 75 GMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
+.+|+| .|.|.+.+. +...-...++|.|.+..
T Consensus 82 ~~~DsG-~Y~C~~~~~--~~~~fg~GT~l~v~~~~ 113 (121)
T 2oi9_C 82 TPSQTS-VYFCASGGG--GTLYFGAGTRLSVLSSA 113 (121)
T ss_dssp CGGGCE-EEEEEEESS--SCEEECCCEEEEEEC--
T ss_pred CHHHCE-EEEEEEccC--CccEECCCeEEEEechh
Confidence 999995 999999875 34455678899998643
No 464
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.02 E-value=6e-10 Score=86.79 Aligned_cols=95 Identities=18% Similarity=0.333 Sum_probs=64.2
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee---------eccCCcEEEccC-----CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI---------IHSGGRYSITTA-----GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~---------~~~~~r~~v~~~-----G~L~I~ 72 (114)
++|....+.+|++|+|.|.+.+.......+.|+|++ .. ++... ....+||.+..+ +.|.|.
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (457)
T 1hzh_H 5 VQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELR 84 (457)
T ss_dssp EECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEEC
Confidence 456678899999999999986543111179999852 21 11100 012579988643 379999
Q ss_pred ecCCCCCCeeeEEEEeeccC------C-c--EEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLT------G-E--RKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~------~-~--~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|+|.|.|..+ + . ...+..+.|.|..
T Consensus 85 ~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~ 127 (457)
T 1hzh_H 85 SLRSADTA-VYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSS 127 (457)
T ss_dssp SCCGGGCE-EEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECS
T ss_pred CCCcccCE-EEEEEEecCCccccccccccccceECCcEEEEecC
Confidence 99999995 99999999753 0 0 0234567888875
No 465
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=99.02 E-value=8.5e-10 Score=72.44 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=56.9
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeC--Ce---e--eeeeee-----cc---CCcEEEccCC---cEE
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLRE--GV---S--EARSII-----HS---GGRYSITTAG---ALH 70 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd--~~---~--~~~~~~-----~~---~~r~~v~~~G---~L~ 70 (114)
.++..|....+.+|.+|.|.|...+..... .+.|+|. +. . ++.... .. .+||.+..++ .|.
T Consensus 2 ~~~q~p~~v~v~~G~~vtL~C~~~~~~~~~-~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~ 80 (114)
T 2hp4_A 2 QFRVSPLDRTWNLGETVELKCQVLLSNPTS-GASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLGDTFVLT 80 (114)
T ss_dssp CEEEECCSCCCCTTCCEEEEEEECCSSCCS-CEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEETTEEEEE
T ss_pred ccEeCCCEEEEcCCCCEEEEEEeecCCCCc-eEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecCCEEEEE
Confidence 467788899999999999999985432112 7899873 33 1 221110 11 4789875433 699
Q ss_pred EeecCCCCCCeeeEEEEeec
Q psy9140 71 IRDTGMEDSYIRYYCQTTHK 90 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~ 90 (114)
|++++.+|+| .|.|.+.+.
T Consensus 81 I~~~~~~Dsg-~Y~C~~~~~ 99 (114)
T 2hp4_A 81 LSDFRRENEG-YYFCSALSN 99 (114)
T ss_dssp ESSCCGGGCE-EEEEEEEET
T ss_pred ECCCCHHHCE-EEEEEEecC
Confidence 9999999995 999999974
No 466
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=99.02 E-value=1.9e-09 Score=71.15 Aligned_cols=91 Identities=18% Similarity=0.120 Sum_probs=61.3
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcc-eEEEeeCCeeeee--ee--------e----ccCCcEEEcc-CCcEEEeecC
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLL-LIAWLREGVSEAR--SI--------I----HSGGRYSITT-AGALHIRDTG 75 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~-~vsW~kd~~~~~~--~~--------~----~~~~r~~v~~-~G~L~I~~v~ 75 (114)
..|+...+.+|.++.|+|.++.. ... .|.|.++. .++. +. . .-.+|..+.. +|+|.|+|++
T Consensus 4 ~~p~~V~~~~G~sVtL~c~~~~~--~~~~~i~W~~~~-~ia~~~~~~~~~~~~~~~~~~~f~~Rl~l~~~~~SL~I~nl~ 80 (111)
T 2pkd_A 4 SEIFTVNGILGESVTFPVNIQEP--RQVKIIAWTSKT-SVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLR 80 (111)
T ss_dssp -CCEEEEEETTSCEEECCCCCTT--CCEEEEEEESSS-EEEEEECCCSSSCCEEEECSGGGTTCEEECTTTCCEEECSCC
T ss_pred CCceEEEEEeCCCEEEeCccCCC--CeeeEEEEecCC-EEEEEECCCCCCcceeEEeCCCcCCcEEEeCCCEEEEECCCC
Confidence 46778889999999999998532 234 89999643 2221 00 0 1136777764 7999999999
Q ss_pred CCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 76 MEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
.+|+| .|+|.+...-. .......-.|.|.+
T Consensus 81 ~~DsG-~Y~c~i~~~~~-~~~~~~~~~L~V~~ 110 (111)
T 2pkd_A 81 MEDAG-DYKADINTQAD-PYTTTKRYNLQIYR 110 (111)
T ss_dssp GGGCE-EEEEEEEESST-TSEEEEEEEEEEEC
T ss_pred HHHCE-EEEEEEEeCCC-CceEEEEEEEEEEc
Confidence 99995 99999987532 11122355677654
No 467
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.02 E-value=1e-09 Score=76.46 Aligned_cols=65 Identities=17% Similarity=0.293 Sum_probs=48.3
Q ss_pred EEeCCeEEEEeecCCCCC--CcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccC
Q psy9140 19 VLRGNIAVLQCNIPAYNH--NLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 19 v~~G~~AvL~C~~~~~~~--~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~ 92 (114)
+.+|..+.|.|.+.+... |.+.++|.|++..+ .+.++ ..++.|.|..+..+|.| .|+|.|.|..+
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~------~~~~~--~~~~~L~i~~~~~~~~g-~Y~C~a~n~~~ 201 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSP------LDPET--TRSSELTLTPRPEDHGT-NLTCQMKRQGA 201 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSS------SCSSC--CCSSEEEECCCTTCCSC-EEEEEEECC--
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCcc------CCCCc--eeEEEEEEecccHHcCc-EEEEEEEeCCC
Confidence 678999999999966411 22289999998742 12333 45789999999988884 99999999753
No 468
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.02 E-value=2.4e-10 Score=88.53 Aligned_cols=92 Identities=17% Similarity=0.332 Sum_probs=64.1
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee---------eccCCcEEEccC-----CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI---------IHSGGRYSITTA-----GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~---------~~~~~r~~v~~~-----G~L~I~ 72 (114)
.+|....|.+|++|.|.|.+.+...+...+.|+|++ ..+ +... ...++||.+..+ +.|.|.
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLS 83 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEEC
T ss_pred ECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEEC
Confidence 456778899999999999997642111279999974 221 1000 012579988653 479999
Q ss_pred ecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~ 107 (114)
+|+.+|+| .|+|.|.|... ..+..++|.|..
T Consensus 84 ~v~~~D~G-~Y~C~~~~~~~---~~~~~~~l~V~~ 114 (434)
T 1igy_B 84 SLTSDDSA-VYYCVREGEVP---YWGQGTTVTVSS 114 (434)
T ss_dssp SBCGGGCS-EECCCCSSSSC---CCCCCEECEECC
T ss_pred CCChHHCE-EEEEEEEcccc---ccCCceEEEEcc
Confidence 99999996 99999998421 234567888863
No 469
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=99.01 E-value=5.6e-10 Score=93.86 Aligned_cols=93 Identities=17% Similarity=0.262 Sum_probs=66.0
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccC
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLT 92 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~ 92 (114)
.+++..+.+|+++.|.|.+.+ +.+ .+.|++++..+ . ....++.+..+|.|.|.+++.+|+| .|.|.|.|...
T Consensus 539 ~~~~v~v~~g~~~~L~C~~~s-p~a--~v~W~~~~~~l---~-~~~~~~~~~~~~~LlI~~v~~~DsG-~Y~C~A~e~~~ 610 (663)
T 1olz_A 539 SYRQHFFKHGGTAELKCSQKS-NLA--RVFWKFQNGVL---K-AESPKYGLMGRKNLLIFNLSEGDSG-VYQCLSEERVK 610 (663)
T ss_dssp EEEEEEEETTSCEEECCCCSC-TTC--EEEEEESSSBC---C-CCSSSBCCTTTTCEEECSCCGGGCE-EEEEEEEEECS
T ss_pred cceEEEEecCCcEEEEccCCC-CCC--cEEEEECCeec---c-ccCcceEEecCCeEEEEecCcccCe-EEEEEEEECcc
Confidence 356778999999999998765 333 89999999853 1 1233444445799999999999995 99999999843
Q ss_pred Cc--EEeCCCeEEEEeccccccc
Q psy9140 93 GE--RKISPPSQVMVSEIALPLK 113 (114)
Q Consensus 93 ~~--~~~s~~a~L~V~~~~~~~~ 113 (114)
+. .+......|.|..|+.+.+
T Consensus 611 ~~~~~~~~~~~~l~V~v~P~~~~ 633 (663)
T 1olz_A 611 NKTVFQVVAKHVLEVKVVPKPVV 633 (663)
T ss_dssp SSEEEEEEEEEEEEEEC------
T ss_pred CCCceEEEEEEEEEEEeCCccCC
Confidence 32 3445678899998887754
No 470
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.01 E-value=4.1e-10 Score=80.68 Aligned_cols=93 Identities=13% Similarity=0.259 Sum_probs=51.2
Q ss_pred eeeccceeEEEeCCeEEEEeecCC-CCCCcceEEEeeCCeeee------------eeeeccCCcEEEccCCcEEEeecCC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPA-YNHNLLLIAWLREGVSEA------------RSIIHSGGRYSITTAGALHIRDTGM 76 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~-~~~~~~~vsW~kd~~~~~------------~~~~~~~~r~~v~~~G~L~I~~v~~ 76 (114)
+.+.+. ..+.+|..+.|.|.+.+ ++.+ +.++|+||+..+. ......++.|.+. ..|.|..++.
T Consensus 122 v~~~~~-~~~~~~~~~~L~C~~~g~~P~p-i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~ 197 (248)
T 3pv7_A 122 SRLLLD-QVGMKENEDKYMCESSGFYPEA-INITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVT--SCLKLNSSQE 197 (248)
T ss_dssp EEEECC---------CEEEEEEEEEBSSC-CEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEE--EEEECC--CC
T ss_pred eEEecC-CccccCCCcEEEEEEccEECCC-eEEEEEECCccCCCccccccceeecccEECCCCCEEEE--EEEEEcCccc
Confidence 444443 44667888999999976 3332 2799999986321 0122345666553 5799999999
Q ss_pred CCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 77 EDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
+|.| .|+|.|.|..... ..+....|.|..|
T Consensus 198 ~d~g-~YtC~a~n~~~~~-~~~~~v~l~V~~p 227 (248)
T 3pv7_A 198 DPGT-VYQCVVRHASLHT-PLRSNFTLTAARH 227 (248)
T ss_dssp CTTC-EEEEEEECTTCSS-CEEEEECC-----
T ss_pred cCCC-EEEEEEECCCCCC-CcEEEEEEEEcCC
Confidence 9984 9999999986542 2333556666444
No 471
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.01 E-value=2.2e-09 Score=84.26 Aligned_cols=95 Identities=19% Similarity=0.278 Sum_probs=65.9
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--eee---eeee---------eccCCcEEEccC-----CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VSE---ARSI---------IHSGGRYSITTA-----GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~~---~~~~---------~~~~~r~~v~~~-----G~L~I~ 72 (114)
+.|++..+.+|++|.|.|.+.+...+...+.|+|+. ... +... ....+||.+..+ +.|.|+
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLS 85 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEEC
Confidence 567888999999999999986543111279999963 211 1100 012579988643 479999
Q ss_pred ecCCCCCCeeeEEEEeeccCCc---EEeCCCeEEEEec
Q psy9140 73 DTGMEDSYIRYYCQTTHKLTGE---RKISPPSQVMVSE 107 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~~~---~~~s~~a~L~V~~ 107 (114)
+++.+|+| .|.|.+.|..++. ...+..++|.|.+
T Consensus 86 ~v~~~D~G-~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~ 122 (475)
T 1iga_A 86 SLRPEDTA-VYYCARDPYGGGKSEFDYWGQGTLVTVSS 122 (475)
T ss_pred CCChhhCE-EEEEEEeccCCCccceeeecCceEEEecc
Confidence 99999995 9999999975421 1244577888874
No 472
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.00 E-value=3e-10 Score=78.96 Aligned_cols=58 Identities=9% Similarity=0.059 Sum_probs=44.9
Q ss_pred EeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCC
Q psy9140 20 LRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 20 ~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
..+.++.|.|.+.+.+.+ .++|+||+..+ ..+ ..|.|++++.+|+| .|+|.|.|.++.
T Consensus 108 ~~~~~v~L~C~~~g~p~p--~i~W~~~g~~l-----~~~--------~~~~i~~~~~~d~G-~Y~C~a~N~~g~ 165 (176)
T 1hng_A 108 WECSNATLTCEVLEGTDV--ELKLYQGKEHL-----RSL--------RQKTMSYQWTNLRA-PFKCKAVNRVSQ 165 (176)
T ss_dssp EETTTTEEEEECSSCSSC--EEEEEETTEEE-----EEE--------SSSEEEEECSCCSS-CEEEEEEETTEE
T ss_pred ecCCcEEEEEEecCCCCc--EEEEEECCEEC-----CCC--------CcEEEEEEEccCCe-EEEEEEEecCCC
Confidence 345579999999876543 89999999854 222 23677799999995 999999999864
No 473
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=98.99 E-value=5.9e-09 Score=71.96 Aligned_cols=95 Identities=21% Similarity=0.253 Sum_probs=66.8
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC-----ee---eeeeee---------ccCCcEEEc--c---CC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG-----VS---EARSII---------HSGGRYSIT--T---AG 67 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~-----~~---~~~~~~---------~~~~r~~v~--~---~G 67 (114)
.+..|....+.+|++|.|.|......... .+.|+|.. .. |+.... ...+||.+. + +-
T Consensus 4 v~Q~p~~~~v~~G~svtL~C~~s~~~~~~-~v~Wyrq~~g~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~ 82 (150)
T 3dmm_D 4 LIQTPSSLLVQTNHTAKMSCEVKSISKLT-SIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRP 82 (150)
T ss_dssp CEEECSEEEEETTSCEEEEEECCCSSCCC-EEEEEEEECCSSCCEEEEEEEEETTTEEEECTTTTTTCCEEEESTTSSSC
T ss_pred cEECCCeEEEeCCCcEEEEEEecCCCCCc-eEEEEEeCCCCCCCccEEEEEEecCCceEeCCCCccCcEEEEEcCCCCEE
Confidence 34568888999999999999985431122 78999852 21 221100 125899886 3 33
Q ss_pred cEEEeecCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEecc
Q psy9140 68 ALHIRDTGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEI 108 (114)
Q Consensus 68 ~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~ 108 (114)
.|.|++++.+|+| .|.|.+.+. +...-...++|.|.+.
T Consensus 83 sL~I~~l~~~Dsg-~Y~C~~~~~--~~~~fG~GT~L~V~~~ 120 (150)
T 3dmm_D 83 FLSIMNVKPEDSD-FYFCATVGS--PKMVFGTGTKLTVVDV 120 (150)
T ss_dssp EEEESSCCGGGCE-EEEEEEECS--SCEEECCCEEEEEESC
T ss_pred EEEECCCChhhCE-EEEEEEecC--CcceECCCEEEEEeCC
Confidence 6999999999994 999999864 3444567889999863
No 474
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.99 E-value=1.7e-10 Score=80.61 Aligned_cols=81 Identities=20% Similarity=0.327 Sum_probs=58.0
Q ss_pred cceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCC
Q psy9140 8 SDYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSY 80 (114)
Q Consensus 8 ~~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~g 80 (114)
+.+.+.+.+..+.+|+.+.|.|.+.++.++.+.++|+||+..+... ....++.|.+. ..|.|..++.+|+|
T Consensus 113 p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~--s~l~i~~~~~~d~g 190 (213)
T 3r06_A 113 PTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLS--STLSLTKADYERHN 190 (213)
T ss_dssp CEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEE--EEEEEEHHHHHTCC
T ss_pred ceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEE--EEEEeCHHHhccCC
Confidence 4456666677777899999999997654322389999999875210 01234555553 47999999999995
Q ss_pred eeeEEEEeecc
Q psy9140 81 IRYYCQTTHKL 91 (114)
Q Consensus 81 g~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 191 -~YtC~v~n~~ 200 (213)
T 3r06_A 191 -LYTCEVTHKT 200 (213)
T ss_dssp -EEEEEEEETT
T ss_pred -eEEEEEEecc
Confidence 9999999974
No 475
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.99 E-value=2.4e-10 Score=80.75 Aligned_cols=81 Identities=15% Similarity=0.294 Sum_probs=51.6
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-----eeccCCcEEEccCCcEEEeecCCCCCCeee
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-----IIHSGGRYSITTAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-----~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y 83 (114)
.+.+.+.....++|+.+.|.|.+.++.++++.++|+||+..+... ....++.|.+. ..|.|...+++|.| .|
T Consensus 111 ~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~--s~l~i~~~~~~~~g-~y 187 (207)
T 2vol_A 111 QVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVY--SKLNVQKSNWEAGN-TF 187 (207)
T ss_dssp EEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEE--EEEEEEHHHHSSCC-EE
T ss_pred eEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEE--EEEEECHHHcCCCC-EE
Confidence 344555444445799999999997653332389999999865210 01223333332 24667777777875 99
Q ss_pred EEEEeeccC
Q psy9140 84 YCQTTHKLT 92 (114)
Q Consensus 84 ~C~a~n~l~ 92 (114)
+|.|.|...
T Consensus 188 tC~a~n~~l 196 (207)
T 2vol_A 188 TCSVLHEGL 196 (207)
T ss_dssp EEEEECTTS
T ss_pred EEEEECCCC
Confidence 999999743
No 476
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta sandwich, immunoglobulin fold, protein-protein heterocomplex; 1.50A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Probab=98.98 E-value=1.8e-09 Score=73.06 Aligned_cols=97 Identities=23% Similarity=0.384 Sum_probs=62.8
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee---------ccCCcEEEccC---C--cEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII---------HSGGRYSITTA---G--ALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~---------~~~~r~~v~~~---G--~L~I~ 72 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .|+.... ...+||.+..+ + .|.|+
T Consensus 5 ~qp~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~ 84 (134)
T 1zvh_A 5 VESGGGSVQAGGSLRLSCAASGYIASINYLGWFRQAPGKEREGVAAVSPAGGTPYYADSVKGRFTVSLDNAENTVYLQMN 84 (134)
T ss_dssp EEECCEEECTTCCEEEEEEEEESGGGEEEEEEEEECTTSCCEEEEEECTTTCCEEECTTTBTTBEEEEETTTTEEEEEEC
T ss_pred EcCCCEEEccCCCEEEEEEeCCCCcCCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCcEEEEEcCCCCEEEEEEC
Confidence 346678899999999999984321111179999853 1 1221110 11469988632 2 69999
Q ss_pred ecCCCCCCeeeEEEEeecc-------CCcEEeCCCeEEEEeccc
Q psy9140 73 DTGMEDSYIRYYCQTTHKL-------TGERKISPPSQVMVSEIA 109 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l-------~~~~~~s~~a~L~V~~~~ 109 (114)
+++.+|+| .|.|.+.+.. .....-...++|.|.+..
T Consensus 85 ~~~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~fG~GT~l~V~~~~ 127 (134)
T 1zvh_A 85 SLKPEDTA-LYYCAAARQGWYIPLNSYGYNYWGQGTQVTVSSRG 127 (134)
T ss_dssp SCCGGGCE-EEEEEEEESSCCCTTCGGGEEEECCCEEEEEC---
T ss_pred CCCHHHCE-EEEEEEecCcccccccccCccEECCCEEEEEcccc
Confidence 99999995 9999998751 123334568889888654
No 477
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.98 E-value=5.2e-09 Score=76.34 Aligned_cols=98 Identities=17% Similarity=0.181 Sum_probs=65.9
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee----eccCCcEEEcc---C--CcEEEeec
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI----IHSGGRYSITT---A--GALHIRDT 74 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~----~~~~~r~~v~~---~--G~L~I~~v 74 (114)
.....|....+.+|.+|.|.|.+.+.......+.|+|.. .. ++... ....+||.+.. . ..|.|+++
T Consensus 3 ~v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 82 (229)
T 1hxm_A 3 ELVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAP 82 (229)
T ss_dssp CEEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSC
T ss_pred ccEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcC
Confidence 455678889999999999999986432111179998853 21 11100 11258999863 2 27999999
Q ss_pred CCCCCCeeeEEEEeeccC-----CcEEeCCCeEEEEec
Q psy9140 75 GMEDSYIRYYCQTTHKLT-----GERKISPPSQVMVSE 107 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l~-----~~~~~s~~a~L~V~~ 107 (114)
+.+|+| .|.|.+.+... ........++|.|..
T Consensus 83 ~~~Dsg-~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~ 119 (229)
T 1hxm_A 83 SERDEG-SYYCACDTLGMGGEYTDKLIFGKGTRVTVEP 119 (229)
T ss_dssp CGGGCE-EEEEEEECCCCSSSCCCCCEEBCCEEEEEEC
T ss_pred CHhHCe-EEEEEEecCCCcccccchhhcCccEEEEEec
Confidence 999995 99999998521 222234567888885
No 478
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.98 E-value=3.4e-09 Score=70.70 Aligned_cols=82 Identities=20% Similarity=0.313 Sum_probs=56.3
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCe-----eeeeee----eccCCcEEEc--c-CC--cEEEeec
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGV-----SEARSI----IHSGGRYSIT--T-AG--ALHIRDT 74 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~-----~~~~~~----~~~~~r~~v~--~-~G--~L~I~~v 74 (114)
+++..|....+.+|.+|.|.|...+.......+.|.|... .++... ....+||.+. + ++ .|.|+++
T Consensus 12 ~~~~~~~~v~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l 91 (122)
T 1hkf_A 12 QAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDL 91 (122)
T ss_dssp ---CCCEEEEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSC
T ss_pred hhccCCceEEEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCC
Confidence 4667788889999999999999854221112789999642 222111 1235899883 2 23 5999999
Q ss_pred CCCCCCeeeEEEEeecc
Q psy9140 75 GMEDSYIRYYCQTTHKL 91 (114)
Q Consensus 75 ~~~D~gg~Y~C~a~n~l 91 (114)
+.+|+| .|.|.+....
T Consensus 92 ~~~Dsg-~Y~C~v~~~~ 107 (122)
T 1hkf_A 92 REEDSG-HYWCRIYRPS 107 (122)
T ss_dssp CGGGCE-EEEEEEECTT
T ss_pred CHHHCE-EEEEEEEcCC
Confidence 999995 9999999864
No 479
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=98.98 E-value=1.6e-09 Score=72.25 Aligned_cols=97 Identities=21% Similarity=0.230 Sum_probs=64.2
Q ss_pred eccceeEEEeCCeEEEEeecCCCC-CCcceEEEeeCC--e---eeeeee-----e---ccCCcEEEcc---C--CcEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYN-HNLLLIAWLREG--V---SEARSI-----I---HSGGRYSITT---A--GALHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~-~~~~~vsW~kd~--~---~~~~~~-----~---~~~~r~~v~~---~--G~L~I~ 72 (114)
.+|....+.+|.+|.|.|...+.. ..+..+.|+|.. . .|+... . ...+||.+.. + ..|.|+
T Consensus 5 ~qp~~~~~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (127)
T 3cx5_J 5 QESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLN 84 (127)
T ss_dssp EEEECSEECTTSCEEEEEEEESSCTTTSSEEEEEEEETTTEEEEEEEEETTSCEEECTTTTTTBCCEEETTTTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEEeCcccCCCcEEEEEEECCCCCcEEEEEEeCCCCeeECcccCCcEEEEEeCCCCEEEEEEC
Confidence 456677899999999999985432 121278998842 2 222111 0 1146887752 2 269999
Q ss_pred ecCCCCCCeeeEEEEeecc----CCcEEeCCCeEEEEeccc
Q psy9140 73 DTGMEDSYIRYYCQTTHKL----TGERKISPPSQVMVSEIA 109 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l----~~~~~~s~~a~L~V~~~~ 109 (114)
+++.+|+| .|.|.+.+.. .....-...++|.|+...
T Consensus 85 ~~~~~Dsg-~Y~C~~~~~~~~~~~~~~~fg~GT~L~V~~~~ 124 (127)
T 3cx5_J 85 SVTTEDTA-TYYCARSEYYSVTGYAMDYWGQGTTVTVSSAW 124 (127)
T ss_dssp SCCGGGCE-EEEEEEEEEETTTEEEEEEECCCEEEEECSCC
T ss_pred CCCHHHCE-EEEEEEEeCccccccccceeCCCEEEEEeccc
Confidence 99999995 9999998742 122234568899998654
No 480
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.98 E-value=2.8e-09 Score=77.06 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=62.3
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCC--cceEEEeeCC--ee---eeeee--------------eccCCcEEEccCC---
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHN--LLLIAWLREG--VS---EARSI--------------IHSGGRYSITTAG--- 67 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~--~~~vsW~kd~--~~---~~~~~--------------~~~~~r~~v~~~G--- 67 (114)
.+|....|.+|.+|.|.|.+.+...+ ...+.|+|.. .. ++... ....+||.+..++
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 84 (239)
T 3tv3_H 5 QESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKN 84 (239)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGT
T ss_pred ecCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCC
Confidence 45677889999999999998554322 2279999842 11 11101 0124799886433
Q ss_pred --cEEEeecCCCCCCeeeEEEEeeccCC----------cEEeCCCeEEEEe
Q psy9140 68 --ALHIRDTGMEDSYIRYYCQTTHKLTG----------ERKISPPSQVMVS 106 (114)
Q Consensus 68 --~L~I~~v~~~D~gg~Y~C~a~n~l~~----------~~~~s~~a~L~V~ 106 (114)
.|.|++++.+|+| .|.|.+.+..++ ....+..+.|.|.
T Consensus 85 ~~~L~I~~v~~~DsG-~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~ 134 (239)
T 3tv3_H 85 LVFLKLNSVTAADTA-TYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVS 134 (239)
T ss_dssp EEEEEECSCCGGGCE-EEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEEC
T ss_pred EEEEEECCCChhhCE-EEEEEEecCccccccccccccceeeeCCCcEEeec
Confidence 3999999999994 999999875310 1233556677775
No 481
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=98.98 E-value=3.8e-09 Score=71.94 Aligned_cols=97 Identities=22% Similarity=0.267 Sum_probs=62.0
Q ss_pred ccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeeee---------ccCCcEEEccC---C--cEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSII---------HSGGRYSITTA---G--ALHIRD 73 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~~---------~~~~r~~v~~~---G--~L~I~~ 73 (114)
+|....+.+|.+|.|.|...+.......+.|+|.. . .|+.... ...+||.+..+ + .|.|++
T Consensus 6 qp~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~ 85 (137)
T 1rjc_A 6 ASGGGSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLYLQMNS 85 (137)
T ss_dssp CBCCEEECTTCCEEEEEECC-CTTTCSEEEEEEECTTSCCEEEEEEETTTCCEEECTTTTTTEEEEEEC--CEEEEEECS
T ss_pred ecCCEEEecCCCEEEEEEecCCcCCCcEEEEEEECCCCCCEEEEEEECCCCceecCcccCCcEEEEEcCCCCEEEEEECC
Confidence 46677899999999999985422111179999853 1 1221110 12479988632 2 699999
Q ss_pred cCCCCCCeeeEEEEeecc----------CCcEEeCCCeEEEEecccc
Q psy9140 74 TGMEDSYIRYYCQTTHKL----------TGERKISPPSQVMVSEIAL 110 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l----------~~~~~~s~~a~L~V~~~~~ 110 (114)
++.+|+| .|.|.+.+.. .....-...++|.|.++.+
T Consensus 86 ~~~~Dsg-~Y~C~~~~~~~~~~~~~~~~~~~~~fG~GT~l~V~~~~~ 131 (137)
T 1rjc_A 86 LKPEDTA-MYYCAADTSTWYRGYCGTNPNYFSYWGQGTQVTVSSRGR 131 (137)
T ss_dssp CCGGGCE-EEEEEECCTTSCCSSCCCCGGGCCEECCCEEEEEC----
T ss_pred CCHHHCE-EEEEEEEcCCccccccccccccccEECCCEEEEEccCcc
Confidence 9999995 9999998751 1222345688899886543
No 482
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=98.98 E-value=3.9e-09 Score=75.62 Aligned_cols=94 Identities=18% Similarity=0.219 Sum_probs=63.7
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee----eccCCcEEEcc-----CCcEEEeecCC
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI----IHSGGRYSITT-----AGALHIRDTGM 76 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~----~~~~~r~~v~~-----~G~L~I~~v~~ 76 (114)
+..|+...+.+|.+|.|.|.+.+.... .+.|+|.. . .++... ....+||.+.. +..|.|++++.
T Consensus 4 ~q~p~~v~v~~G~~v~L~C~~s~~~~~--~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 81 (203)
T 2bnu_A 4 TQIPAALSVPEGENLVLNCSFTDSAIY--NLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQP 81 (203)
T ss_dssp EEECSEEEEETTCCEEEEEEESCCCEE--EEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCG
T ss_pred EEcCCEEEEeCCCCEEEEEEECCCCcc--eEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCc
Confidence 345788899999999999998543222 78998853 2 122111 12358998852 23799999999
Q ss_pred CCCCeeeEEEEeecc--CCcEEeCCCeEEEEec
Q psy9140 77 EDSYIRYYCQTTHKL--TGERKISPPSQVMVSE 107 (114)
Q Consensus 77 ~D~gg~Y~C~a~n~l--~~~~~~s~~a~L~V~~ 107 (114)
+|+| .|.|.+.+.. .........++|.|+.
T Consensus 82 ~Dsg-~Y~C~~~~~~~~~~~~~~g~gt~L~V~~ 113 (203)
T 2bnu_A 82 GDSA-TYLCAVRPTSGGSYIPTFGRGTSLIVHP 113 (203)
T ss_dssp GGCE-EEEEEEEECSSSTTCCEECCCEEEEEEC
T ss_pred ccCe-EEEEEEEcCcCcceeeeeCCCEEEEEeC
Confidence 9995 9999998742 1111234567888875
No 483
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=98.97 E-value=5.7e-10 Score=75.80 Aligned_cols=92 Identities=21% Similarity=0.314 Sum_probs=63.8
Q ss_pred ccceeEEEeCCeEEEEeecC-CCCCCcceEEEeeCC--e---eeeeee--e-------cc-CCcEEEccCC---cEEEee
Q psy9140 13 NTGNTFVLRGNIAVLQCNIP-AYNHNLLLIAWLREG--V---SEARSI--I-------HS-GGRYSITTAG---ALHIRD 73 (114)
Q Consensus 13 ~~~d~~v~~G~~AvL~C~~~-~~~~~~~~vsW~kd~--~---~~~~~~--~-------~~-~~r~~v~~~G---~L~I~~ 73 (114)
.|+...+.+|.+|.|.|... +.... .+.|+|.. . .++... . .. .+||.+..++ .|.|++
T Consensus 5 ~p~~v~v~~G~~vtL~C~~s~~~~~~--~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~L~I~~ 82 (137)
T 3bdb_A 5 ELHVKTVKRGENVTMECSMSKVTNKN--NLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIG 82 (137)
T ss_dssp BCEECCCCTTCEECCCCBCTTCCCGG--GBEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEEES
T ss_pred CCCeEEEcCCCCEEEEeecCCCcCcc--eEEEEEECCCCCCEEEEEEEcCCCcceecCcccCCcEEEEecCCEEEEEECC
Confidence 46677899999999999985 43222 78999853 2 222100 0 01 5899886443 699999
Q ss_pred cCCCCCCeeeEEEEeeccCCcEEeCCCeEEEEeccc
Q psy9140 74 TGMEDSYIRYYCQTTHKLTGERKISPPSQVMVSEIA 109 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~~~~~~s~~a~L~V~~~~ 109 (114)
++.+|+| .|.|.+.+. ....-...++|.|.+..
T Consensus 83 ~~~~Dsg-~Y~C~~~~~--~~~~fg~GT~L~V~~~~ 115 (137)
T 3bdb_A 83 AREDDGG-EYFCGEVEG--IIIKFTSGTRLQFEGSN 115 (137)
T ss_dssp CCSTTCE-EEEEEEECS--SCEEEEEEEEECCCCCC
T ss_pred CCHHHCE-EEEEEEccC--CeEEECCCEEEEEECCC
Confidence 9999995 999999975 23334557788887643
No 484
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.97 E-value=6.6e-10 Score=78.45 Aligned_cols=77 Identities=16% Similarity=0.276 Sum_probs=54.1
Q ss_pred eccceeEEEeCCeEEEEeecCCC-CCCcceEEEeeCCeee---eeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAY-NHNLLLIAWLREGVSE---ARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~-~~~~~~vsW~kd~~~~---~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+....+.+|.++.|.|.+.++ +.+ +.++|.|++..+ ..+.....++|.+ ++.|.|.+++.+| | .|+|.|
T Consensus 130 ~~~~~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~~-g-~Y~C~a 204 (220)
T 1pz5_B 130 PLVPGCSDTSGSSVTLGCLVKGYFPEP-VTVKWNYGALSSGVRTVSSVLQSGFYSL--SSLVTVPSSTWPS-Q-TVICNV 204 (220)
T ss_dssp EECCCSCCSCSSSEEEEEEEEEEBSSC-CEEEEGGGTCCTTEEECCCEEETTEEEE--EEEEEECGGGTTT-S-CCEEEE
T ss_pred EcccccccCCCCcEEEEEEEEEEeCCC-eEEEEecCCcccceEEcCCcccCCeEEE--EEEEEEcchhcCC-c-eEEEEE
Confidence 33334456789999999999765 332 279999998731 1111112267766 4789999999866 5 999999
Q ss_pred eeccCC
Q psy9140 88 THKLTG 93 (114)
Q Consensus 88 ~n~l~~ 93 (114)
.|..+.
T Consensus 205 ~n~~~~ 210 (220)
T 1pz5_B 205 AHPASK 210 (220)
T ss_dssp EEGGGT
T ss_pred EECCcc
Confidence 998764
No 485
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=98.97 E-value=3e-09 Score=76.29 Aligned_cols=94 Identities=16% Similarity=0.257 Sum_probs=61.3
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee---------eccCCcEEEccCCc-----EEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI---------IHSGGRYSITTAGA-----LHIR 72 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~---------~~~~~r~~v~~~G~-----L~I~ 72 (114)
.+|....|.+|.+|.|.|.+.++..+...+.|+|.. . .++... ....+||.+..++. |.|+
T Consensus 5 ~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (226)
T 3mlr_H 5 VESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWT 84 (226)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEES
T ss_pred EcCCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEEC
Confidence 456678899999999999985432121278999842 1 111100 01247998865443 9999
Q ss_pred ecCCCCCCeeeEEEEeeccC------CcEEeCCCeEEEEe
Q psy9140 73 DTGMEDSYIRYYCQTTHKLT------GERKISPPSQVMVS 106 (114)
Q Consensus 73 ~v~~~D~gg~Y~C~a~n~l~------~~~~~s~~a~L~V~ 106 (114)
+++.+|+| .|.|.+.+... .....+..+.|.|.
T Consensus 85 ~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~ 123 (226)
T 3mlr_H 85 TLQASDTG-KYFCTRLYLFEGAQSSNAFDLWGQGTMILVS 123 (226)
T ss_dssp SCCGGGCE-EEEEEEEEEEESSSEEEEEEEECCCEEEEEC
T ss_pred CCCcccCE-EEEEeEccCCCcccccchhhhhCCccEEeec
Confidence 99999995 99999987521 01223456677775
No 486
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.97 E-value=1.7e-09 Score=76.88 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=48.5
Q ss_pred EeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCCcEEeCC
Q psy9140 20 LRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTGERKISP 99 (114)
Q Consensus 20 ~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~~~~~s~ 99 (114)
.+|++++|.|.+| .+ .++|+||+..+. .. ...++.|.|.+++.+|+| .|+|.+.+. .|.
T Consensus 16 ~~G~~v~L~C~~p---~~--~i~W~k~g~~l~-----~~----~~~~~~L~i~~v~~~DsG-~Y~C~~~~~------~s~ 74 (204)
T 1sy6_A 16 QEDGSVLLTCDAE---AK--NITWFKDGKMIG-----FL----TEDKKKWNLGSNAKDPRG-MYQCKGSQN------KSK 74 (204)
T ss_dssp CSSSEEEEEECSC---SS--EEEEEETTEEEE-----EE----ESSCCCEEEEEGGGCCEE-EEEEESSSS------CCC
T ss_pred cCCCeEEEEEcCC---CC--EEEEEECCEECC-----CC----CCCCCeEEeCCCCcCCCE-EEEEEecCC------CCe
Confidence 5899999999982 23 899999998642 11 124689999999999995 999998653 233
Q ss_pred CeEEEEe
Q psy9140 100 PSQVMVS 106 (114)
Q Consensus 100 ~a~L~V~ 106 (114)
...|.|.
T Consensus 75 ~~~v~v~ 81 (204)
T 1sy6_A 75 PLQVYYR 81 (204)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 4555554
No 487
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.97 E-value=2.6e-10 Score=79.65 Aligned_cols=75 Identities=13% Similarity=0.302 Sum_probs=55.8
Q ss_pred ceeeccceeEEEeCCeEEEEeecCC-CCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCC
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPA-YNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSY 80 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~-~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~g 80 (114)
.+.+.+....+.+|+.+.|.|.+.+ ++.+ .++|+||+..+... ....+++|.+. +.|.|.+++.+|+|
T Consensus 116 ~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~--~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~g 191 (213)
T 3nl4_L 116 TVLIFPPSADLVATGTVTIVCVANKYFPDV--TVTWEVDGTTQTTGIENSKTPQNSADCTYNLS--STLTLTSTEYNSHK 191 (213)
T ss_dssp EEEEECCCHHHHTTSEEEEEEEEEEEBSCC--EEEEEETTEECCSSEEEEECCCCTTTCCEEEE--EEEEEEHHHHHTCC
T ss_pred eEEEeCCchhhccCCcEeEEEEEecccCCc--EEEEEeCCccCCCCeecccCcccCCCCeEEEE--EEEEecHHHcCCCC
Confidence 3445555556678999999999976 4422 89999999875210 11245677664 78999999999995
Q ss_pred eeeEEEEe
Q psy9140 81 IRYYCQTT 88 (114)
Q Consensus 81 g~Y~C~a~ 88 (114)
.|+|.|.
T Consensus 192 -~Y~C~a~ 198 (213)
T 3nl4_L 192 -EYTCKVT 198 (213)
T ss_dssp -EEEEEEE
T ss_pred -eEEEEEE
Confidence 9999999
No 488
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.97 E-value=7e-10 Score=77.80 Aligned_cols=78 Identities=10% Similarity=0.260 Sum_probs=53.7
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeee---eeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEe
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEAR---SIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTT 88 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~---~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~ 88 (114)
+.+....+.+|.++.|.|.+.++.+.++.++|.|++..+.. +....+++|.+. +.|.|.+++.+| | .|+|.|.
T Consensus 123 ~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~~-g-~Y~C~a~ 198 (210)
T 3d9a_H 123 PLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS--SSVTVPSSTWPS-E-TVTCNVA 198 (210)
T ss_dssp EECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEE--EEEEEEGGGTTT-S-CCEEEEE
T ss_pred EecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEE--EEEEEcHHHcCC-C-cEEEEEE
Confidence 33334456799999999999765222227999999875311 111123566553 679999999866 5 9999999
Q ss_pred eccCC
Q psy9140 89 HKLTG 93 (114)
Q Consensus 89 n~l~~ 93 (114)
|..+.
T Consensus 199 n~~~~ 203 (210)
T 3d9a_H 199 HPASS 203 (210)
T ss_dssp EGGGT
T ss_pred eCCCC
Confidence 98764
No 489
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.96 E-value=2e-09 Score=79.62 Aligned_cols=94 Identities=17% Similarity=0.266 Sum_probs=61.6
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee--------eccCCcEEEccCCc-----EEEee
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI--------IHSGGRYSITTAGA-----LHIRD 73 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~--------~~~~~r~~v~~~G~-----L~I~~ 73 (114)
.+|....|.+|.+|.|.|.+.++......+.|+|.. .. ++... ....+||.+..++. |.|++
T Consensus 5 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 84 (263)
T 3iu4_H 5 KESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNS 84 (263)
T ss_dssp EEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECS
T ss_pred ECCCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECC
Confidence 345567899999999999985432111278998742 11 11100 11257999865443 99999
Q ss_pred cCCCCCCeeeEEEEeeccC-----CcEEeCCCeEEEEe
Q psy9140 74 TGMEDSYIRYYCQTTHKLT-----GERKISPPSQVMVS 106 (114)
Q Consensus 74 v~~~D~gg~Y~C~a~n~l~-----~~~~~s~~a~L~V~ 106 (114)
++.+|+| .|.|.+.+... .....+..+.|.|.
T Consensus 85 v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~ 121 (263)
T 3iu4_H 85 LQTDDTA-MYYCARSGVREGRAQAWFAYWGQGTLVTVS 121 (263)
T ss_dssp CCGGGCE-EEEEEEEECC---CEEEEEEECCCEEEEEC
T ss_pred CCHHHCE-EEEEEEEeCCCCccccccceeCCceEEEEe
Confidence 9999995 99999987521 12234556788885
No 490
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.96 E-value=2.6e-10 Score=80.53 Aligned_cols=80 Identities=16% Similarity=0.268 Sum_probs=56.6
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
.+.+.+.+..+.+|+.+.|.|.+.+..++.+.++|+||+..+... ....++.|.+. ..|.|..++.+|+|
T Consensus 137 ~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~g- 213 (237)
T 3sob_L 137 SVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLS--STLTLSKADYEKHK- 213 (237)
T ss_dssp EEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEE--EEEEEEHHHHTTCC-
T ss_pred ceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEE--EEEEEcHHHccCCC-
Confidence 344555555566799999999996643211289999999875310 11235566554 57999999999995
Q ss_pred eeEEEEeecc
Q psy9140 82 RYYCQTTHKL 91 (114)
Q Consensus 82 ~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 214 ~Y~C~a~n~~ 223 (237)
T 3sob_L 214 VYACEVTHQG 223 (237)
T ss_dssp EEEEEEECTT
T ss_pred cEEEEEeeCC
Confidence 9999999974
No 491
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.96 E-value=3.2e-10 Score=84.68 Aligned_cols=81 Identities=14% Similarity=0.260 Sum_probs=55.0
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCCee
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSYIR 82 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~gg~ 82 (114)
+.+.+.....++|+.+.|.|.+.++..+.+.++|+||+..+... ....++.|.+. +.|.|.+++.+|+| .
T Consensus 222 v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~g-~ 298 (323)
T 2wqr_A 222 VYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVF--SRLEVTRAEWEQKD-E 298 (323)
T ss_dssp EEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEE--EEEEEEHHHHHHCC-C
T ss_pred EEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEE--EEEEEChHHccCCC-E
Confidence 44444333334599999999996643332279999999865210 01224455543 57999999999995 9
Q ss_pred eEEEEeeccCC
Q psy9140 83 YYCQTTHKLTG 93 (114)
Q Consensus 83 Y~C~a~n~l~~ 93 (114)
|+|.|.|....
T Consensus 299 Y~C~a~n~~~~ 309 (323)
T 2wqr_A 299 FICRAVHEAAS 309 (323)
T ss_dssp EEEEEECTTST
T ss_pred EEEEEEeCCCC
Confidence 99999997543
No 492
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.95 E-value=6.5e-09 Score=74.18 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=65.1
Q ss_pred eeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--ee---eeeee----eccCCcEEEcc-----CCcEEEeecC
Q psy9140 10 YEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--VS---EARSI----IHSGGRYSITT-----AGALHIRDTG 75 (114)
Q Consensus 10 ~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~~---~~~~~----~~~~~r~~v~~-----~G~L~I~~v~ 75 (114)
.+..|....+.+|.+|.|.|.+.+.... .+.|+|.. .. ++... ....+||.+.. +..|.|++++
T Consensus 4 v~Q~p~~v~v~~G~~v~L~C~~s~~~~~--~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~ 81 (194)
T 1lp9_E 4 VTQTEGLVTLTEGLPVMLNCTYQSTYSP--FLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQ 81 (194)
T ss_dssp EEECCSEEEEETTSCEEECEEEECSSSC--CEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCC
T ss_pred cEecCCEEEEecCCCEEEEEEeCCCCCc--eEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccC
Confidence 3445888899999999999998543222 68998853 21 22110 12268999852 3589999999
Q ss_pred CCCCCeeeEEEEeecc--CCcEEeCCCeEEEEec
Q psy9140 76 MEDSYIRYYCQTTHKL--TGERKISPPSQVMVSE 107 (114)
Q Consensus 76 ~~D~gg~Y~C~a~n~l--~~~~~~s~~a~L~V~~ 107 (114)
.+|+| .|.|.+.+.. .........++|.|+.
T Consensus 82 ~~Dsg-~Y~C~~~~~~~~~~~~~~g~gt~L~V~~ 114 (194)
T 1lp9_E 82 LSDSA-LYYCALFLASSSFSKLVFGQGTSLSVVP 114 (194)
T ss_dssp GGGCE-EEEEEEEECSSSSCEEEECCCEEEEEEC
T ss_pred cccCe-eEEEEEecccCCcceeeeccCceEEecC
Confidence 99995 9999998731 1222334577888874
No 493
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.95 E-value=2.8e-10 Score=81.38 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=53.8
Q ss_pred cceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCCeeeEEE
Q psy9140 14 TGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQ 86 (114)
Q Consensus 14 ~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~ 86 (114)
|.+..+.+|+.+.|.|.+.++.++++.++|+||+..+... ....++.|.+. ..|.|..++.+|.||.|+|.
T Consensus 129 ~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~~g~YtC~ 206 (240)
T 3q5y_A 129 PSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLS--SRLRVSATFWHNPRNHFRCQ 206 (240)
T ss_dssp CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEE--EEEEEEHHHHSCTTCEEEEE
T ss_pred CchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEE--EEEEECHHHhccCCCEEEEE
Confidence 3444556799999999997643332378999999875210 11224555553 46999999999966799999
Q ss_pred EeeccC
Q psy9140 87 TTHKLT 92 (114)
Q Consensus 87 a~n~l~ 92 (114)
|.|...
T Consensus 207 v~~~~~ 212 (240)
T 3q5y_A 207 VQFHGL 212 (240)
T ss_dssp EEECCB
T ss_pred EEcCCC
Confidence 998743
No 494
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=98.95 E-value=3.3e-09 Score=77.27 Aligned_cols=95 Identities=21% Similarity=0.325 Sum_probs=62.3
Q ss_pred eeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeeee---------eccCCcEEEccCCc-----EEE
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARSI---------IHSGGRYSITTAGA-----LHI 71 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~~---------~~~~~r~~v~~~G~-----L~I 71 (114)
..+|....+.+|++|.|.|.+.++..+...+.|+|.. . .++... ....+||.+..++. |.|
T Consensus 27 v~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 106 (256)
T 3sob_H 27 LVESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQM 106 (256)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred EEecCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEE
Confidence 3455667899999999999985432121278999742 1 111100 01247999865443 999
Q ss_pred eecCCCCCCeeeEEEEeecc--------CCcEEeCCCeEEEEe
Q psy9140 72 RDTGMEDSYIRYYCQTTHKL--------TGERKISPPSQVMVS 106 (114)
Q Consensus 72 ~~v~~~D~gg~Y~C~a~n~l--------~~~~~~s~~a~L~V~ 106 (114)
++++.+|+| .|.|.+.+.- ......+..+.|.|.
T Consensus 107 ~~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~ 148 (256)
T 3sob_H 107 NSLRAEDTA-VYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVS 148 (256)
T ss_dssp CSCCGGGCE-EEEEEEESSCTTCSSCCTTSEEEECCCEEEEEC
T ss_pred CCCCcccCE-EEEEEEecCCCccccccccceeEECCCEEEEEe
Confidence 999999995 9999998742 012234557788886
No 495
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.95 E-value=1.1e-10 Score=84.44 Aligned_cols=80 Identities=19% Similarity=0.315 Sum_probs=53.8
Q ss_pred ceeeccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeee-------eeccCCcEEEccCCcEEEeecCCCCCCe
Q psy9140 9 DYEINTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARS-------IIHSGGRYSITTAGALHIRDTGMEDSYI 81 (114)
Q Consensus 9 ~~~v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~-------~~~~~~r~~v~~~G~L~I~~v~~~D~gg 81 (114)
.+.+.+.+..+.+|+++.|.|.+.++.++++.++|+||+..+... ....++.|.+. ..|.|.+++.+|+|
T Consensus 152 ~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d~g- 228 (252)
T 3bkj_L 152 TVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS--STLTLTKDEYERHN- 228 (252)
T ss_dssp EEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEE--EEEEEEHHHHHHCC-
T ss_pred EEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEE--EEEEEcchhccCCC-
Confidence 344444444456899999999996643222279999999864211 00123344332 45999999999995
Q ss_pred eeEEEEeecc
Q psy9140 82 RYYCQTTHKL 91 (114)
Q Consensus 82 ~Y~C~a~n~l 91 (114)
.|+|.|.|..
T Consensus 229 ~Y~C~a~n~~ 238 (252)
T 3bkj_L 229 SYTCEATHKT 238 (252)
T ss_dssp EEEEEEECTT
T ss_pred eEEEEEEeCC
Confidence 9999999963
No 496
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.95 E-value=3.2e-09 Score=75.91 Aligned_cols=94 Identities=20% Similarity=0.311 Sum_probs=60.5
Q ss_pred eccceeEEEeCCeEEEEeecCCCCC-Ccc-eEEEeeCCe--e---eeeee-----------eccCCcEEEccCC-----c
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNH-NLL-LIAWLREGV--S---EARSI-----------IHSGGRYSITTAG-----A 68 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~-~~~-~vsW~kd~~--~---~~~~~-----------~~~~~r~~v~~~G-----~ 68 (114)
.+|....+.+|.+|.|.|.+.+... ... .|.|+|... . ++... ....+||.+..++ .
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 84 (232)
T 3qhz_H 5 RESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVV 84 (232)
T ss_dssp EEECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEE
T ss_pred EcCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEE
Confidence 3566678999999999999854321 122 459998421 1 11000 0113699887443 5
Q ss_pred EEEeecCCCCCCeeeEEEEeeccCC-----cEEeCCCeEEEEe
Q psy9140 69 LHIRDTGMEDSYIRYYCQTTHKLTG-----ERKISPPSQVMVS 106 (114)
Q Consensus 69 L~I~~v~~~D~gg~Y~C~a~n~l~~-----~~~~s~~a~L~V~ 106 (114)
|.|++++.+|+| .|.|.+.|..++ ....+..+.|.|.
T Consensus 85 L~I~~v~~~DsG-~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~ 126 (232)
T 3qhz_H 85 LTMTNMDPVDTA-TYYCARTLRVSGDYVRDFDLWGRGTLVTVS 126 (232)
T ss_dssp EEECSCCGGGCE-EEEEEEECCC---CCCCCCEECCCEEEEEC
T ss_pred EEECcCChhhCE-EEEEEEeeccCccccccceeeCCCeEEEEe
Confidence 999999999995 999999975211 0124556778876
No 497
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=98.95 E-value=4.6e-09 Score=69.60 Aligned_cols=97 Identities=21% Similarity=0.277 Sum_probs=61.5
Q ss_pred eccceeEEEeCCeEEEEeecCCCCCCcceEEEeeCC--e---eeeee---e--------eccCCcEEEcc---CC--cEE
Q psy9140 12 INTGNTFVLRGNIAVLQCNIPAYNHNLLLIAWLREG--V---SEARS---I--------IHSGGRYSITT---AG--ALH 70 (114)
Q Consensus 12 v~~~d~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~--~---~~~~~---~--------~~~~~r~~v~~---~G--~L~ 70 (114)
.+|....+.+|.+|.|.|...+.......+.|+|.. . .|+.. . ....+||.+.. ++ .|.
T Consensus 5 ~q~~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~y~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~ 84 (124)
T 1dlf_H 5 EESGGGLVQPGGSMKLSCATSGFTFSDAWMDWVRQSPEKGLEWVAEIRNKANNHATYYAESVKGRFTISRDDSKRRVYLQ 84 (124)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred EccCCEEEcCCCCEEEEeECCCccCCCCeEEEEEECCCCCceEEEEEEeccCCCceeeCcccCCcEEEEEcCCCCEEEEE
Confidence 345677899999999999984321111279998843 1 12211 0 01247998863 22 699
Q ss_pred EeecCCCCCCeeeEEEEeecc-CCcEEeCCCeEEEEeccc
Q psy9140 71 IRDTGMEDSYIRYYCQTTHKL-TGERKISPPSQVMVSEIA 109 (114)
Q Consensus 71 I~~v~~~D~gg~Y~C~a~n~l-~~~~~~s~~a~L~V~~~~ 109 (114)
|++++.+|+| .|.|.+.+.. .....-...++|.|...+
T Consensus 85 I~~~~~~Dsg-~Y~C~~~~~~~~~~~~fg~GT~L~V~~~~ 123 (124)
T 1dlf_H 85 MNTLRAEDTG-IYYCTGIYYHYPWFAYWGQGTLVTVSAEP 123 (124)
T ss_dssp ECSCCGGGCE-EEEEEEEBTTBSSCCCCCCCEEEEEC---
T ss_pred ECCCCHHHCE-EEEEEEEeCCCcccceECCCEEEEEecCC
Confidence 9999999995 9999998741 112123457789987653
No 498
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.94 E-value=2.1e-10 Score=85.61 Aligned_cols=78 Identities=12% Similarity=0.204 Sum_probs=54.6
Q ss_pred eeccceeEEEeCCeEEEEeecCCCC-CCc-ceEEEeeCCeeeeeee-----eccCCcEEEccCCcEEEeecCCCCCCeee
Q psy9140 11 EINTGNTFVLRGNIAVLQCNIPAYN-HNL-LLIAWLREGVSEARSI-----IHSGGRYSITTAGALHIRDTGMEDSYIRY 83 (114)
Q Consensus 11 ~v~~~d~~v~~G~~AvL~C~~~~~~-~~~-~~vsW~kd~~~~~~~~-----~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y 83 (114)
...|....+.+|.+|.|.|.+.++. .+. ..++|+|++...+... ...+++|. .++.|.|.+++.+|+| .|
T Consensus 117 ~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~--~~~~L~I~~~~~~D~G-~Y 193 (323)
T 2wqr_A 117 LSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT--VTSTLPVGTRDWIEGE-TY 193 (323)
T ss_dssp ECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE--EEEEEECCHHHHHTTC-CE
T ss_pred EcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEE--EEEEEEECHHHccCCC-CE
Confidence 3445555678999999999986543 221 2799999764322100 12345665 3568999999999995 99
Q ss_pred EEEEeecc
Q psy9140 84 YCQTTHKL 91 (114)
Q Consensus 84 ~C~a~n~l 91 (114)
+|.|.|..
T Consensus 194 ~C~a~n~~ 201 (323)
T 2wqr_A 194 QCRVTHPH 201 (323)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
Confidence 99999975
No 499
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.92 E-value=7.7e-10 Score=79.32 Aligned_cols=73 Identities=12% Similarity=0.281 Sum_probs=46.8
Q ss_pred eEEEeCCeEEEEeecCCCCCCcceEEEeeCCeeee---eeeeccCCcEEEccCCcEEEeecCCCCCCeeeEEEEeeccCC
Q psy9140 17 TFVLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEA---RSIIHSGGRYSITTAGALHIRDTGMEDSYIRYYCQTTHKLTG 93 (114)
Q Consensus 17 ~~v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~---~~~~~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a~n~l~~ 93 (114)
..+.+|..+.|.|.+.++.+.++.++|.|++..+- .+....+++|.+ ++.|.|.+++.+| | .|+|.|.|...+
T Consensus 131 ~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-g-~Y~C~a~n~~~~ 206 (227)
T 1mju_H 131 CGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVTVTSSTWPS-Q-SITCNVAHPASS 206 (227)
T ss_dssp C------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEE--EEEEEECTTTTTT-S-CCEEEEEEGGGT
T ss_pred ccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCceecCCeEEE--EEEEEEchhhcCC-C-eEEEEEEECCCC
Confidence 45678999999999976422222899999987531 111112266655 3689999999977 6 999999997543
No 500
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.92 E-value=4.5e-10 Score=80.52 Aligned_cols=72 Identities=15% Similarity=0.298 Sum_probs=53.1
Q ss_pred EEeCCeEEEEeecCCCCCCcceEEEeeCCeeeeeeee-----------ccCCcEEEccCCcEEEeecCCCCCCeeeEEEE
Q psy9140 19 VLRGNIAVLQCNIPAYNHNLLLIAWLREGVSEARSII-----------HSGGRYSITTAGALHIRDTGMEDSYIRYYCQT 87 (114)
Q Consensus 19 v~~G~~AvL~C~~~~~~~~~~~vsW~kd~~~~~~~~~-----------~~~~r~~v~~~G~L~I~~v~~~D~gg~Y~C~a 87 (114)
+.+|+.+.|.|.+.++.++++.++|+||+..+..... ..++.|.+. ..|.|...+.+|.||.|+|.|
T Consensus 136 ~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~g~~YtC~v 213 (245)
T 3nfj_J 136 ISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALS--SRLRVSATFWQNPRNHFRCQV 213 (245)
T ss_dssp HHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEE--EEEEEEHHHHTCTTCEEEEEE
T ss_pred ccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEE--EEEEECHHHhccCCCeEEEEE
Confidence 4459999999999775433337899999987521100 146777764 579999999999667999999
Q ss_pred eeccC
Q psy9140 88 THKLT 92 (114)
Q Consensus 88 ~n~l~ 92 (114)
.|...
T Consensus 214 ~~~~~ 218 (245)
T 3nfj_J 214 QFYGL 218 (245)
T ss_dssp EECCB
T ss_pred EECCC
Confidence 99743
Done!