Query psy9141
Match_columns 379
No_of_seqs 329 out of 2442
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 20:01:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9141.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9141hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 7.6E-31 2.6E-35 256.8 17.1 304 4-326 21-372 (407)
2 3fmw_A Oxygenase; mithramycin, 100.0 1.3E-30 4.4E-35 265.6 14.7 310 6-346 49-412 (570)
3 4hb9_A Similarities with proba 100.0 3.4E-29 1.2E-33 244.1 19.9 150 7-164 2-173 (412)
4 2qa2_A CABE, polyketide oxygen 100.0 2E-29 6.7E-34 253.3 15.9 280 5-314 11-333 (499)
5 2r0c_A REBC; flavin adenine di 100.0 1.9E-28 6.5E-33 249.0 23.0 294 1-314 21-364 (549)
6 2qa1_A PGAE, polyketide oxygen 100.0 2.5E-29 8.4E-34 252.6 15.9 285 4-316 9-334 (500)
7 1pn0_A Phenol 2-monooxygenase; 100.0 3.5E-29 1.2E-33 259.4 16.0 306 6-327 8-426 (665)
8 2vou_A 2,6-dihydroxypyridine h 100.0 2E-28 6.7E-33 239.0 19.5 152 1-164 1-160 (397)
9 3ihg_A RDME; flavoenzyme, anth 100.0 1E-28 3.4E-33 250.3 17.8 162 1-172 1-199 (535)
10 3c96_A Flavin-containing monoo 100.0 5.6E-28 1.9E-32 236.8 19.2 152 4-164 2-176 (410)
11 2x3n_A Probable FAD-dependent 100.0 3.2E-28 1.1E-32 237.5 16.9 150 4-163 4-172 (399)
12 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.1E-27 7E-32 230.3 21.4 316 4-354 9-360 (379)
13 2xdo_A TETX2 protein; tetracyc 100.0 1.5E-27 5E-32 233.0 18.6 155 1-164 21-189 (398)
14 2dkh_A 3-hydroxybenzoate hydro 99.9 2.4E-27 8.4E-32 244.9 18.7 159 6-171 32-226 (639)
15 1k0i_A P-hydroxybenzoate hydro 99.9 3E-28 1E-32 237.1 9.8 150 6-163 2-169 (394)
16 3oz2_A Digeranylgeranylglycero 99.9 2.9E-26 9.9E-31 221.8 16.5 162 4-174 2-180 (397)
17 3nix_A Flavoprotein/dehydrogen 99.9 6.2E-25 2.1E-29 215.3 19.4 163 1-174 1-184 (421)
18 3cgv_A Geranylgeranyl reductas 99.9 8.2E-24 2.8E-28 205.3 20.1 151 4-163 2-168 (397)
19 3e1t_A Halogenase; flavoprotei 99.9 1.4E-23 4.8E-28 211.5 21.6 151 4-163 5-178 (512)
20 3i3l_A Alkylhalidase CMLS; fla 99.9 1E-24 3.4E-29 222.7 13.2 152 4-163 21-194 (591)
21 3atr_A Conserved archaeal prot 99.9 2.3E-23 7.8E-28 206.7 17.7 150 6-163 6-168 (453)
22 2pyx_A Tryptophan halogenase; 99.9 5.5E-22 1.9E-26 200.5 14.6 151 1-163 2-240 (526)
23 3c4a_A Probable tryptophan hyd 99.9 1.7E-23 5.8E-28 203.0 1.6 273 8-313 2-313 (381)
24 2e4g_A Tryptophan halogenase; 99.9 2.7E-21 9.2E-26 196.4 15.4 147 5-163 24-258 (550)
25 2aqj_A Tryptophan halogenase, 99.8 1.2E-20 4.2E-25 191.0 15.9 151 1-164 1-229 (538)
26 2gmh_A Electron transfer flavo 99.8 6.9E-19 2.4E-23 179.8 24.6 147 6-164 35-224 (584)
27 2weu_A Tryptophan 5-halogenase 99.8 8E-20 2.8E-24 183.8 16.6 145 7-163 3-236 (511)
28 3ihm_A Styrene monooxygenase A 99.8 3.5E-20 1.2E-24 182.6 5.9 155 7-182 23-194 (430)
29 2bry_A NEDD9 interacting prote 99.7 1.5E-17 5.2E-22 166.7 11.2 140 5-163 91-236 (497)
30 1yvv_A Amine oxidase, flavin-c 99.6 2.5E-15 8.5E-20 142.2 14.4 147 7-162 3-167 (336)
31 3v76_A Flavoprotein; structura 99.4 8.1E-13 2.8E-17 129.3 11.3 142 4-157 25-187 (417)
32 3dje_A Fructosyl amine: oxygen 99.4 1.1E-12 3.9E-17 128.8 10.3 47 108-158 172-222 (438)
33 3dme_A Conserved exported prot 99.4 5.2E-12 1.8E-16 120.4 13.9 53 108-162 161-215 (369)
34 1rp0_A ARA6, thiazole biosynth 99.4 1.2E-12 4.1E-17 121.5 9.1 143 5-163 38-197 (284)
35 3nlc_A Uncharacterized protein 99.4 6E-12 2E-16 126.9 14.7 132 6-158 107-278 (549)
36 2i0z_A NAD(FAD)-utilizing dehy 99.4 2.7E-12 9.2E-17 126.8 11.4 141 6-157 26-191 (447)
37 2oln_A NIKD protein; flavoprot 99.3 1E-11 3.5E-16 120.3 14.8 50 109-163 165-215 (397)
38 3ps9_A TRNA 5-methylaminomethy 99.3 5.9E-12 2E-16 130.7 12.8 149 6-158 272-474 (676)
39 1y56_B Sarcosine oxidase; dehy 99.3 6.7E-12 2.3E-16 120.8 11.8 51 108-163 160-212 (382)
40 1qo8_A Flavocytochrome C3 fuma 99.3 1.5E-11 5.2E-16 125.0 14.2 151 5-163 120-318 (566)
41 3pvc_A TRNA 5-methylaminomethy 99.3 4.4E-12 1.5E-16 131.9 9.3 46 109-158 424-470 (689)
42 1y0p_A Fumarate reductase flav 99.3 2.8E-11 9.6E-16 123.2 15.0 150 6-163 126-323 (571)
43 3nyc_A D-arginine dehydrogenas 99.3 9.3E-12 3.2E-16 119.4 9.3 51 108-163 165-216 (381)
44 3da1_A Glycerol-3-phosphate de 99.3 1.9E-11 6.7E-16 124.0 12.1 55 108-163 181-239 (561)
45 1chu_A Protein (L-aspartate ox 99.3 3.9E-11 1.3E-15 121.2 14.3 157 1-159 1-210 (540)
46 2gqf_A Hypothetical protein HI 99.3 1.6E-11 5.5E-16 119.5 10.8 143 4-158 2-169 (401)
47 4a9w_A Monooxygenase; baeyer-v 99.3 7.3E-12 2.5E-16 118.7 8.2 125 4-158 1-133 (357)
48 2cul_A Glucose-inhibited divis 99.3 3.6E-11 1.2E-15 108.1 12.1 129 4-162 1-130 (232)
49 2gf3_A MSOX, monomeric sarcosi 99.3 5.4E-11 1.9E-15 114.5 14.2 46 108-158 161-206 (389)
50 3jsk_A Cypbp37 protein; octame 99.2 1.8E-11 6.2E-16 115.8 9.8 142 6-163 79-257 (344)
51 2uzz_A N-methyl-L-tryptophan o 99.2 6.8E-11 2.3E-15 113.2 14.0 46 108-158 160-205 (372)
52 1ryi_A Glycine oxidase; flavop 99.2 2.3E-11 7.8E-16 117.0 10.5 50 109-163 176-226 (382)
53 2qcu_A Aerobic glycerol-3-phos 99.2 8.8E-11 3E-15 117.6 13.9 54 108-162 160-216 (501)
54 2gag_B Heterotetrameric sarcos 99.2 2.5E-11 8.5E-16 117.6 9.4 50 109-163 186-237 (405)
55 3c4n_A Uncharacterized protein 99.2 2.1E-11 7.3E-16 118.7 7.4 51 108-163 183-244 (405)
56 2gv8_A Monooxygenase; FMO, FAD 99.2 9.4E-11 3.2E-15 115.6 12.0 155 1-158 1-178 (447)
57 4dgk_A Phytoene dehydrogenase; 99.2 1.1E-10 3.9E-15 116.4 12.3 52 108-163 232-284 (501)
58 2zbw_A Thioredoxin reductase; 99.2 3.8E-11 1.3E-15 113.3 8.2 124 1-161 1-125 (335)
59 3ces_A MNMG, tRNA uridine 5-ca 99.2 5.8E-11 2E-15 121.0 9.9 146 5-161 27-185 (651)
60 2ywl_A Thioredoxin reductase r 99.2 1.8E-10 6.1E-15 99.0 11.5 110 7-163 2-116 (180)
61 1d4d_A Flavocytochrome C fumar 99.1 5.3E-10 1.8E-14 113.7 15.7 154 6-163 126-323 (572)
62 3i6d_A Protoporphyrinogen oxid 99.1 1.4E-10 4.7E-15 114.5 11.0 45 112-160 248-292 (470)
63 1kf6_A Fumarate reductase flav 99.1 2.4E-10 8.1E-15 116.9 12.5 156 5-162 4-202 (602)
64 4at0_A 3-ketosteroid-delta4-5a 99.1 2.6E-10 8.8E-15 114.5 12.4 38 6-43 41-78 (510)
65 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 1.8E-10 6.1E-15 109.3 10.6 140 7-156 2-164 (342)
66 2zxi_A TRNA uridine 5-carboxym 99.1 1.9E-10 6.6E-15 116.8 10.4 145 6-161 27-184 (637)
67 3f8d_A Thioredoxin reductase ( 99.1 4.7E-10 1.6E-14 104.7 12.2 106 6-158 15-126 (323)
68 3ab1_A Ferredoxin--NADP reduct 99.1 1.6E-10 5.3E-15 110.4 8.8 123 4-162 12-136 (360)
69 3cp8_A TRNA uridine 5-carboxym 99.1 3.1E-10 1.1E-14 115.5 10.9 145 5-160 20-177 (641)
70 2wdq_A Succinate dehydrogenase 99.1 1.2E-09 4.2E-14 111.3 15.3 37 5-41 6-42 (588)
71 3axb_A Putative oxidoreductase 99.1 1.6E-10 5.4E-15 113.8 8.4 35 4-38 21-56 (448)
72 4fk1_A Putative thioredoxin re 99.1 5.5E-10 1.9E-14 104.2 11.6 36 4-39 4-39 (304)
73 2h88_A Succinate dehydrogenase 99.1 1.4E-09 4.8E-14 111.3 15.4 152 6-159 18-219 (621)
74 3fbs_A Oxidoreductase; structu 99.1 5.3E-10 1.8E-14 103.2 11.1 105 7-159 3-114 (297)
75 2gjc_A Thiazole biosynthetic e 99.1 2.9E-10 1E-14 106.9 9.3 142 6-163 65-245 (326)
76 2rgh_A Alpha-glycerophosphate 99.0 8.5E-10 2.9E-14 112.2 11.8 38 5-42 31-68 (571)
77 3gwf_A Cyclohexanone monooxyge 99.0 8.8E-10 3E-14 111.3 11.4 133 5-158 7-148 (540)
78 2ivd_A PPO, PPOX, protoporphyr 99.0 9.2E-10 3.1E-14 109.1 11.2 72 1-72 11-91 (478)
79 3lzw_A Ferredoxin--NADP reduct 99.0 5.3E-10 1.8E-14 104.9 8.6 117 4-157 5-123 (332)
80 2e5v_A L-aspartate oxidase; ar 99.0 1.9E-09 6.5E-14 107.1 12.9 147 8-161 1-180 (472)
81 2bs2_A Quinol-fumarate reducta 99.0 2.2E-09 7.5E-14 110.7 13.5 40 1-41 1-40 (660)
82 2q0l_A TRXR, thioredoxin reduc 99.0 2.3E-09 7.9E-14 99.9 12.0 110 7-160 2-117 (311)
83 3d1c_A Flavin-containing putat 99.0 9.4E-10 3.2E-14 105.0 8.5 135 4-158 2-144 (369)
84 2q7v_A Thioredoxin reductase; 98.9 2.1E-09 7.2E-14 101.0 9.9 110 5-158 7-124 (325)
85 1s3e_A Amine oxidase [flavin-c 98.9 5.9E-09 2E-13 104.6 13.7 44 111-158 226-269 (520)
86 3itj_A Thioredoxin reductase 1 98.9 2.6E-09 8.9E-14 100.4 10.4 113 6-158 22-143 (338)
87 3ka7_A Oxidoreductase; structu 98.9 6.3E-09 2.1E-13 101.4 13.4 47 109-160 208-255 (425)
88 3o0h_A Glutathione reductase; 98.9 2E-09 6.8E-14 107.2 10.0 48 109-160 244-291 (484)
89 1pj5_A N,N-dimethylglycine oxi 98.9 2.3E-09 8E-14 113.7 10.6 47 108-159 162-209 (830)
90 3kkj_A Amine oxidase, flavin-c 98.9 7.7E-10 2.6E-14 99.2 5.9 36 7-42 3-38 (336)
91 3uox_A Otemo; baeyer-villiger 98.9 5.8E-10 2E-14 112.7 5.5 131 4-160 7-150 (545)
92 3lov_A Protoporphyrinogen oxid 98.9 3.9E-09 1.3E-13 104.6 11.4 70 4-73 2-82 (475)
93 4gde_A UDP-galactopyranose mut 98.9 1.1E-09 3.7E-14 109.4 7.3 38 6-43 10-48 (513)
94 4ap3_A Steroid monooxygenase; 98.9 2.9E-09 9.9E-14 107.7 10.2 129 5-158 20-160 (549)
95 2a8x_A Dihydrolipoyl dehydroge 98.9 7.6E-10 2.6E-14 109.6 5.7 136 5-160 2-149 (464)
96 3urh_A Dihydrolipoyl dehydroge 98.9 6.9E-09 2.4E-13 103.5 12.5 51 108-159 250-302 (491)
97 3nrn_A Uncharacterized protein 98.9 6.7E-09 2.3E-13 101.2 12.2 47 108-160 200-246 (421)
98 1w4x_A Phenylacetone monooxyge 98.9 3.4E-09 1.2E-13 107.1 9.9 129 5-159 15-156 (542)
99 1fl2_A Alkyl hydroperoxide red 98.9 6.4E-09 2.2E-13 96.8 11.1 112 6-158 1-116 (310)
100 1vdc_A NTR, NADPH dependent th 98.9 2E-09 6.8E-14 101.3 7.6 120 4-159 6-126 (333)
101 4a5l_A Thioredoxin reductase; 98.9 2.5E-09 8.5E-14 99.7 7.9 120 1-157 1-121 (314)
102 1trb_A Thioredoxin reductase; 98.9 3E-09 1E-13 99.4 8.3 110 4-158 3-117 (320)
103 3k7m_X 6-hydroxy-L-nicotine ox 98.9 8E-09 2.7E-13 100.9 11.4 44 108-156 215-258 (431)
104 2b9w_A Putative aminooxidase; 98.9 3E-08 1E-12 96.6 15.0 42 1-42 1-43 (424)
105 2xve_A Flavin-containing monoo 98.8 6E-09 2E-13 103.2 9.5 147 7-160 3-169 (464)
106 3cty_A Thioredoxin reductase; 98.8 1.3E-08 4.3E-13 95.3 11.0 111 6-158 16-127 (319)
107 2vvm_A Monoamine oxidase N; FA 98.8 2E-08 6.7E-13 100.0 13.1 45 110-158 268-313 (495)
108 3s5w_A L-ornithine 5-monooxyge 98.8 2.6E-08 8.9E-13 98.3 13.5 37 6-42 30-71 (463)
109 3lxd_A FAD-dependent pyridine 98.8 1.9E-08 6.5E-13 98.0 11.9 48 108-159 205-253 (415)
110 2a87_A TRXR, TR, thioredoxin r 98.8 4.9E-09 1.7E-13 99.0 7.4 109 5-158 13-127 (335)
111 3gyx_A Adenylylsulfate reducta 98.8 6.9E-09 2.4E-13 106.9 8.5 38 6-43 22-65 (662)
112 3lad_A Dihydrolipoamide dehydr 98.8 1.5E-08 5E-13 100.6 10.6 51 108-160 232-283 (476)
113 1jnr_A Adenylylsulfate reducta 98.8 1.8E-08 6.1E-13 103.8 11.5 147 6-158 22-219 (643)
114 3nks_A Protoporphyrinogen oxid 98.8 1.8E-08 6.2E-13 99.6 10.6 36 7-42 3-40 (477)
115 3iwa_A FAD-dependent pyridine 98.8 2.1E-08 7E-13 99.5 10.4 121 6-157 3-125 (472)
116 1hyu_A AHPF, alkyl hydroperoxi 98.8 2.6E-08 8.8E-13 100.1 11.1 111 4-158 210-327 (521)
117 1q1r_A Putidaredoxin reductase 98.7 1.6E-08 5.6E-13 99.1 8.3 111 6-159 4-116 (431)
118 1v59_A Dihydrolipoamide dehydr 98.7 6.9E-09 2.4E-13 103.0 5.3 136 5-157 4-157 (478)
119 3fg2_P Putative rubredoxin red 98.7 7.9E-08 2.7E-12 93.3 12.5 48 108-159 195-243 (404)
120 1ojt_A Surface protein; redox- 98.7 1.2E-08 4E-13 101.6 6.2 135 6-159 6-162 (482)
121 1xdi_A RV3303C-LPDA; reductase 98.7 2.1E-08 7.3E-13 100.1 7.8 48 108-159 234-281 (499)
122 1dxl_A Dihydrolipoamide dehydr 98.7 3.3E-09 1.1E-13 105.1 1.8 139 4-160 4-154 (470)
123 3sx6_A Sulfide-quinone reducta 98.7 5.1E-08 1.8E-12 95.7 10.3 111 1-159 1-114 (437)
124 3p1w_A Rabgdi protein; GDI RAB 98.7 7.8E-08 2.7E-12 95.0 11.5 38 5-42 19-56 (475)
125 4gut_A Lysine-specific histone 98.7 4.1E-08 1.4E-12 102.8 9.8 43 110-156 542-584 (776)
126 3h8l_A NADH oxidase; membrane 98.7 9.9E-08 3.4E-12 92.7 11.9 109 8-158 3-114 (409)
127 2bc0_A NADH oxidase; flavoprot 98.7 4.2E-08 1.4E-12 97.8 9.1 114 5-158 34-150 (490)
128 4dna_A Probable glutathione re 98.7 5.1E-08 1.7E-12 96.4 9.3 48 108-160 222-271 (463)
129 3l8k_A Dihydrolipoyl dehydroge 98.7 3.7E-08 1.3E-12 97.5 8.0 136 6-157 4-144 (466)
130 3oc4_A Oxidoreductase, pyridin 98.7 8.2E-08 2.8E-12 94.6 10.5 111 7-157 3-115 (452)
131 3kd9_A Coenzyme A disulfide re 98.6 7.9E-08 2.7E-12 94.6 9.6 111 5-157 2-114 (449)
132 3ics_A Coenzyme A-disulfide re 98.6 1.3E-07 4.5E-12 96.3 11.4 117 4-157 34-152 (588)
133 3cgb_A Pyridine nucleotide-dis 98.6 2.2E-07 7.6E-12 92.3 12.7 114 7-158 37-153 (480)
134 1zk7_A HGII, reductase, mercur 98.6 2.3E-07 7.9E-12 91.7 12.7 47 109-160 228-274 (467)
135 3r9u_A Thioredoxin reductase; 98.6 2.4E-07 8.2E-12 85.9 12.0 108 5-157 3-118 (315)
136 2gqw_A Ferredoxin reductase; f 98.6 9.3E-08 3.2E-12 93.0 9.1 111 1-158 1-114 (408)
137 3qfa_A Thioredoxin reductase 1 98.6 9.7E-08 3.3E-12 95.9 9.5 36 4-39 30-65 (519)
138 1zmd_A Dihydrolipoyl dehydroge 98.6 1.2E-08 4.2E-13 101.2 2.7 133 5-159 5-154 (474)
139 3klj_A NAD(FAD)-dependent dehy 98.6 2.6E-07 9E-12 89.1 12.0 109 5-157 8-116 (385)
140 1nhp_A NADH peroxidase; oxidor 98.6 2.7E-07 9.3E-12 90.7 11.8 112 8-157 2-115 (447)
141 1ebd_A E3BD, dihydrolipoamide 98.6 8E-08 2.7E-12 94.8 7.7 132 6-159 3-147 (455)
142 3h28_A Sulfide-quinone reducta 98.6 2.6E-07 8.8E-12 90.4 11.1 106 7-158 3-110 (430)
143 3ntd_A FAD-dependent pyridine 98.6 1.6E-07 5.5E-12 95.1 9.9 113 8-157 3-117 (565)
144 2cdu_A NADPH oxidase; flavoenz 98.5 2.5E-07 8.5E-12 91.1 10.6 116 7-158 1-118 (452)
145 1d5t_A Guanine nucleotide diss 98.5 2.9E-07 9.8E-12 90.3 10.7 45 110-158 247-291 (433)
146 3dgh_A TRXR-1, thioredoxin red 98.5 4.9E-07 1.7E-11 89.8 12.3 35 4-38 7-41 (483)
147 2v3a_A Rubredoxin reductase; a 98.5 1E-06 3.5E-11 84.8 13.6 102 6-160 145-246 (384)
148 3ef6_A Toluene 1,2-dioxygenase 98.5 3.4E-07 1.2E-11 89.1 10.2 107 7-157 3-111 (410)
149 4gcm_A TRXR, thioredoxin reduc 98.5 6.7E-08 2.3E-12 90.1 5.0 38 1-39 2-39 (312)
150 1m6i_A Programmed cell death p 98.5 2.9E-07 9.9E-12 91.8 9.8 129 4-157 9-144 (493)
151 2qae_A Lipoamide, dihydrolipoy 98.5 1.5E-08 5.1E-13 100.4 0.3 132 6-158 2-149 (468)
152 2yqu_A 2-oxoglutarate dehydrog 98.5 7.8E-07 2.7E-11 87.6 12.2 100 7-160 168-267 (455)
153 1y56_A Hypothetical protein PH 98.5 2E-07 6.7E-12 93.0 7.8 48 108-159 268-315 (493)
154 3hyw_A Sulfide-quinone reducta 98.5 4E-07 1.4E-11 89.1 9.6 104 8-157 4-109 (430)
155 4b1b_A TRXR, thioredoxin reduc 98.5 4.4E-07 1.5E-11 91.4 9.9 52 107-162 273-324 (542)
156 2yqu_A 2-oxoglutarate dehydrog 98.5 1.1E-07 3.6E-12 93.9 5.2 130 6-158 1-142 (455)
157 1xhc_A NADH oxidase /nitrite r 98.4 5.1E-07 1.7E-11 86.5 9.3 105 7-157 9-113 (367)
158 3fpz_A Thiazole biosynthetic e 98.4 7.8E-08 2.7E-12 90.5 2.7 38 5-42 64-103 (326)
159 1c0p_A D-amino acid oxidase; a 98.4 2.7E-07 9.1E-12 88.0 6.2 37 5-41 5-41 (363)
160 2v3a_A Rubredoxin reductase; a 98.4 9E-07 3.1E-11 85.2 9.2 110 5-158 3-114 (384)
161 4eqs_A Coenzyme A disulfide re 98.4 1.7E-06 5.7E-11 84.9 11.0 113 8-157 2-116 (437)
162 3dgz_A Thioredoxin reductase 2 98.3 1.2E-06 4.1E-11 87.2 9.8 35 5-39 5-39 (488)
163 2r9z_A Glutathione amide reduc 98.3 3.3E-06 1.1E-10 83.4 12.8 99 7-159 167-266 (463)
164 2eq6_A Pyruvate dehydrogenase 98.3 1.3E-06 4.4E-11 86.4 9.6 103 7-160 170-274 (464)
165 1v0j_A UDP-galactopyranose mut 98.3 3.7E-07 1.3E-11 88.5 5.4 70 1-70 1-84 (399)
166 2yg5_A Putrescine oxidase; oxi 98.3 6.3E-07 2.2E-11 87.9 7.1 66 4-69 3-77 (453)
167 1ges_A Glutathione reductase; 98.3 1.7E-06 5.8E-11 85.2 9.9 100 7-160 168-268 (450)
168 2bcg_G Secretory pathway GDP d 98.3 5.9E-07 2E-11 88.6 6.1 38 5-42 10-47 (453)
169 1ebd_A E3BD, dihydrolipoamide 98.2 8.6E-06 3E-10 80.1 13.3 103 6-159 170-272 (455)
170 3t37_A Probable dehydrogenase; 98.2 1.1E-06 3.8E-11 88.0 6.5 54 106-160 220-274 (526)
171 1rsg_A FMS1 protein; FAD bindi 98.2 6E-07 2.1E-11 89.9 4.2 39 4-42 6-45 (516)
172 3q9t_A Choline dehydrogenase a 98.2 3.6E-06 1.2E-10 85.3 9.9 36 5-40 5-41 (577)
173 3vrd_B FCCB subunit, flavocyto 98.2 6E-06 2E-10 79.7 10.9 104 7-157 3-108 (401)
174 2hqm_A GR, grase, glutathione 98.2 4.8E-06 1.6E-10 82.6 10.3 99 7-159 186-287 (479)
175 4b63_A L-ornithine N5 monooxyg 98.2 2E-05 6.7E-10 78.6 14.8 51 105-156 153-213 (501)
176 1ojt_A Surface protein; redox- 98.2 5.6E-06 1.9E-10 82.1 10.8 101 6-160 185-289 (482)
177 2eq6_A Pyruvate dehydrogenase 98.2 7.1E-07 2.4E-11 88.2 4.0 39 1-39 1-39 (464)
178 1sez_A Protoporphyrinogen oxid 98.2 2.4E-06 8.3E-11 85.0 7.9 67 6-72 13-88 (504)
179 3dk9_A Grase, GR, glutathione 98.2 9.3E-07 3.2E-11 87.6 4.3 36 4-39 18-53 (478)
180 1nhp_A NADH peroxidase; oxidor 98.2 1.1E-05 3.9E-10 79.0 12.0 100 5-159 148-248 (447)
181 3ef6_A Toluene 1,2-dioxygenase 98.2 5.5E-06 1.9E-10 80.4 9.6 101 6-159 143-243 (410)
182 3qvp_A Glucose oxidase; oxidor 98.2 1E-05 3.5E-10 82.1 11.8 35 5-39 18-53 (583)
183 1q1r_A Putidaredoxin reductase 98.2 1.2E-05 4.1E-10 78.6 11.9 101 6-159 149-252 (431)
184 4dsg_A UDP-galactopyranose mut 98.1 1.8E-06 6.3E-11 85.7 6.0 42 1-42 4-46 (484)
185 2a8x_A Dihydrolipoyl dehydroge 98.1 1.6E-05 5.6E-10 78.3 12.5 102 7-159 172-273 (464)
186 3g3e_A D-amino-acid oxidase; F 98.1 1.2E-06 4.2E-11 82.9 3.7 34 8-41 2-41 (351)
187 2jae_A L-amino acid oxidase; o 98.1 2.6E-06 8.7E-11 84.5 6.1 38 5-42 10-47 (489)
188 1mo9_A ORF3; nucleotide bindin 98.1 1.6E-05 5.6E-10 79.7 12.0 100 7-160 215-319 (523)
189 2hqm_A GR, grase, glutathione 98.1 1.5E-06 5.3E-11 86.1 4.4 36 4-39 9-44 (479)
190 4g6h_A Rotenone-insensitive NA 98.1 5E-06 1.7E-10 83.0 8.0 34 6-39 42-75 (502)
191 2bi7_A UDP-galactopyranose mut 98.1 2.5E-06 8.5E-11 82.2 5.6 66 5-70 2-79 (384)
192 2e1m_A L-glutamate oxidase; L- 98.1 2.6E-06 8.8E-11 81.7 5.6 37 5-41 43-80 (376)
193 3ntd_A FAD-dependent pyridine 98.1 2.3E-05 8E-10 79.1 13.0 99 7-159 152-269 (565)
194 1v59_A Dihydrolipoamide dehydr 98.1 2E-05 6.8E-10 78.0 11.9 104 6-160 183-290 (478)
195 3oc4_A Oxidoreductase, pyridin 98.1 3.2E-05 1.1E-09 75.9 13.3 99 7-159 148-246 (452)
196 1zmd_A Dihydrolipoyl dehydroge 98.1 2E-05 6.7E-10 78.0 11.8 101 7-159 179-284 (474)
197 1onf_A GR, grase, glutathione 98.1 2.6E-05 8.9E-10 77.7 12.8 101 7-160 177-278 (500)
198 2cdu_A NADPH oxidase; flavoenz 98.1 2.9E-05 1E-09 76.2 12.8 100 7-159 150-249 (452)
199 1m6i_A Programmed cell death p 98.1 3E-05 1E-09 77.2 12.9 100 7-159 181-284 (493)
200 3hdq_A UDP-galactopyranose mut 98.1 3.3E-06 1.1E-10 81.6 5.5 67 5-71 28-105 (397)
201 1lvl_A Dihydrolipoamide dehydr 98.1 9.3E-06 3.2E-10 80.0 8.8 100 7-160 172-271 (458)
202 2wpf_A Trypanothione reductase 98.1 2.4E-05 8E-10 77.9 11.8 100 7-160 192-295 (495)
203 3iwa_A FAD-dependent pyridine 98.0 2.7E-05 9.3E-10 76.9 11.8 101 6-159 159-260 (472)
204 3s5w_A L-ornithine 5-monooxyge 98.0 6.4E-05 2.2E-09 73.8 14.4 146 6-158 227-378 (463)
205 1dxl_A Dihydrolipoamide dehydr 98.0 1.7E-05 5.8E-10 78.3 10.2 103 6-159 177-281 (470)
206 3ic9_A Dihydrolipoamide dehydr 98.0 1.9E-06 6.5E-11 85.8 3.1 47 112-159 229-276 (492)
207 3g5s_A Methylenetetrahydrofola 98.0 7.7E-06 2.6E-10 78.2 6.8 36 7-42 2-37 (443)
208 1fec_A Trypanothione reductase 98.0 3.2E-05 1.1E-09 76.9 11.5 100 7-160 188-291 (490)
209 2gqw_A Ferredoxin reductase; f 98.0 4.8E-05 1.6E-09 73.7 12.4 97 6-159 145-241 (408)
210 2qae_A Lipoamide, dihydrolipoy 98.0 5.3E-05 1.8E-09 74.7 12.9 103 7-159 175-278 (468)
211 3ic9_A Dihydrolipoamide dehydr 98.0 9.2E-05 3.1E-09 73.6 14.6 36 6-41 174-209 (492)
212 1i8t_A UDP-galactopyranose mut 98.0 4.4E-06 1.5E-10 80.0 4.5 36 7-42 2-37 (367)
213 2r9z_A Glutathione amide reduc 98.0 5.5E-06 1.9E-10 81.8 5.1 35 5-39 3-37 (463)
214 1mo9_A ORF3; nucleotide bindin 97.9 7.9E-06 2.7E-10 81.9 5.4 37 5-41 42-78 (523)
215 2vdc_G Glutamate synthase [NAD 97.9 8.1E-06 2.8E-10 80.5 5.4 37 5-41 121-157 (456)
216 1ges_A Glutathione reductase; 97.9 5.7E-06 2E-10 81.3 4.2 35 5-39 3-37 (450)
217 1onf_A GR, grase, glutathione 97.9 7.9E-06 2.7E-10 81.5 5.2 34 6-39 2-35 (500)
218 3d1c_A Flavin-containing putat 97.9 5.4E-05 1.8E-09 71.7 10.8 106 7-159 167-274 (369)
219 1trb_A Thioredoxin reductase; 97.9 0.00013 4.3E-09 67.7 12.9 98 7-158 146-248 (320)
220 3itj_A Thioredoxin reductase 1 97.9 8.7E-05 3E-09 69.1 11.8 96 6-157 173-271 (338)
221 3pl8_A Pyranose 2-oxidase; sub 97.9 8.5E-06 2.9E-10 83.5 5.2 38 5-42 45-82 (623)
222 3cgb_A Pyridine nucleotide-dis 97.9 7.9E-05 2.7E-09 73.8 11.9 100 5-159 185-284 (480)
223 2bc0_A NADH oxidase; flavoprot 97.9 0.0001 3.6E-09 73.1 12.7 99 6-159 194-293 (490)
224 2q0l_A TRXR, thioredoxin reduc 97.9 0.00015 5.2E-09 66.9 12.9 97 6-158 143-242 (311)
225 2iid_A L-amino-acid oxidase; f 97.9 9.5E-06 3.3E-10 80.6 4.8 37 6-42 33-69 (498)
226 1fl2_A Alkyl hydroperoxide red 97.8 9.6E-05 3.3E-09 68.2 11.1 96 7-158 145-243 (310)
227 1lvl_A Dihydrolipoamide dehydr 97.8 9.5E-06 3.3E-10 79.9 4.2 35 4-38 3-37 (458)
228 3k30_A Histamine dehydrogenase 97.8 1.3E-05 4.4E-10 83.2 5.1 37 5-41 390-426 (690)
229 1fec_A Trypanothione reductase 97.8 1.1E-05 3.7E-10 80.3 4.3 33 5-37 2-35 (490)
230 3ab1_A Ferredoxin--NADP reduct 97.8 0.00012 4.2E-09 69.2 11.5 98 7-158 164-264 (360)
231 3f8d_A Thioredoxin reductase ( 97.8 0.0002 6.8E-09 66.1 12.7 98 6-159 154-253 (323)
232 1kdg_A CDH, cellobiose dehydro 97.8 1.5E-05 5E-10 80.4 5.0 37 4-40 5-41 (546)
233 1lqt_A FPRA; NADP+ derivative, 97.8 1.2E-05 4E-10 79.3 4.0 38 4-41 1-45 (456)
234 2zbw_A Thioredoxin reductase; 97.7 0.0003 1E-08 65.6 13.0 100 6-158 152-253 (335)
235 2q7v_A Thioredoxin reductase; 97.7 0.0002 6.9E-09 66.6 11.7 96 7-158 153-250 (325)
236 3dgz_A Thioredoxin reductase 2 97.7 0.00024 8.3E-09 70.4 12.9 102 7-160 186-290 (488)
237 2wpf_A Trypanothione reductase 97.7 1.4E-05 4.7E-10 79.6 3.8 32 6-37 7-39 (495)
238 3dk9_A Grase, GR, glutathione 97.7 0.00036 1.2E-08 68.9 13.7 102 7-160 188-296 (478)
239 3ics_A Coenzyme A-disulfide re 97.7 0.00018 6.3E-09 73.0 11.7 98 6-159 187-284 (588)
240 1o94_A Tmadh, trimethylamine d 97.7 3E-05 1E-09 80.9 5.8 36 6-41 389-424 (729)
241 1vdc_A NTR, NADPH dependent th 97.7 0.00036 1.2E-08 65.0 12.7 96 7-158 160-260 (333)
242 2x8g_A Thioredoxin glutathione 97.7 2.2E-05 7.5E-10 80.0 4.6 34 5-38 106-139 (598)
243 3l8k_A Dihydrolipoyl dehydroge 97.7 0.00019 6.5E-09 70.7 11.3 101 7-160 173-275 (466)
244 1b37_A Protein (polyamine oxid 97.7 3.2E-05 1.1E-09 76.3 5.4 43 111-157 228-270 (472)
245 3r9u_A Thioredoxin reductase; 97.7 0.00025 8.6E-09 65.2 10.9 94 7-157 148-244 (315)
246 3kd9_A Coenzyme A disulfide re 97.6 0.0003 1E-08 68.9 11.8 97 7-158 149-245 (449)
247 2z3y_A Lysine-specific histone 97.6 4.2E-05 1.5E-09 78.9 5.6 37 5-41 106-142 (662)
248 1ps9_A 2,4-dienoyl-COA reducta 97.6 4.3E-05 1.5E-09 79.0 5.6 36 6-41 373-408 (671)
249 2a87_A TRXR, TR, thioredoxin r 97.6 0.00031 1.1E-08 65.7 10.7 96 6-157 155-252 (335)
250 3cty_A Thioredoxin reductase; 97.6 0.00022 7.5E-09 66.1 9.4 95 7-158 156-253 (319)
251 2xag_A Lysine-specific histone 97.6 5.7E-05 1.9E-09 79.8 5.9 36 6-41 278-313 (852)
252 4eqs_A Coenzyme A disulfide re 97.5 0.00033 1.1E-08 68.4 10.2 95 7-159 148-242 (437)
253 1xhc_A NADH oxidase /nitrite r 97.5 0.00025 8.6E-09 67.6 8.9 94 7-160 144-237 (367)
254 2gag_A Heterotetrameric sarcos 97.5 6.2E-05 2.1E-09 80.9 5.1 37 6-42 128-164 (965)
255 1gte_A Dihydropyrimidine dehyd 97.5 7.5E-05 2.5E-09 80.8 5.5 36 6-41 187-223 (1025)
256 1cjc_A Protein (adrenodoxin re 97.5 7.1E-05 2.4E-09 73.8 4.9 36 6-41 6-43 (460)
257 1ju2_A HydroxynitrIle lyase; f 97.5 4.2E-05 1.4E-09 76.9 3.3 34 6-40 26-59 (536)
258 1gpe_A Protein (glucose oxidas 97.5 7.8E-05 2.7E-09 75.8 4.9 38 4-41 22-60 (587)
259 1n4w_A CHOD, cholesterol oxida 97.5 7.2E-05 2.5E-09 74.6 4.4 37 4-40 3-39 (504)
260 3gwf_A Cyclohexanone monooxyge 97.4 0.00043 1.5E-08 69.6 9.6 35 6-40 178-212 (540)
261 3klj_A NAD(FAD)-dependent dehy 97.4 0.00013 4.3E-09 70.2 5.3 35 7-41 147-181 (385)
262 3qfa_A Thioredoxin reductase 1 97.4 0.0014 4.7E-08 65.5 12.9 100 7-159 211-317 (519)
263 3uox_A Otemo; baeyer-villiger 97.4 0.0008 2.7E-08 67.7 11.0 35 6-40 185-219 (545)
264 1coy_A Cholesterol oxidase; ox 97.4 0.00013 4.5E-09 72.7 5.0 37 4-40 9-45 (507)
265 3fim_B ARYL-alcohol oxidase; A 97.3 8.2E-05 2.8E-09 75.2 3.1 36 6-41 2-38 (566)
266 3lzw_A Ferredoxin--NADP reduct 97.3 0.00077 2.6E-08 62.4 9.3 95 6-157 154-250 (332)
267 2x8g_A Thioredoxin glutathione 97.3 0.002 7E-08 65.3 13.2 100 7-159 287-397 (598)
268 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00092 3.1E-08 66.8 10.4 95 7-157 356-453 (521)
269 4g6h_A Rotenone-insensitive NA 97.3 0.00093 3.2E-08 66.5 10.3 97 8-156 219-331 (502)
270 2jbv_A Choline oxidase; alcoho 97.3 0.00016 5.5E-09 72.8 4.5 37 5-41 12-49 (546)
271 3fbs_A Oxidoreductase; structu 97.2 0.0017 5.8E-08 59.0 10.3 86 6-157 141-226 (297)
272 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00015 5.1E-09 74.8 3.1 36 6-41 56-100 (721)
273 4ap3_A Steroid monooxygenase; 97.1 0.0013 4.4E-08 66.2 9.3 35 6-40 191-225 (549)
274 1vg0_A RAB proteins geranylger 97.1 0.00052 1.8E-08 70.0 6.1 37 6-42 8-44 (650)
275 2xve_A Flavin-containing monoo 97.0 0.0018 6.3E-08 63.6 9.3 35 6-40 197-231 (464)
276 3llv_A Exopolyphosphatase-rela 96.9 0.00083 2.8E-08 54.5 4.8 33 7-39 7-39 (141)
277 4a5l_A Thioredoxin reductase; 96.9 0.012 4E-07 53.9 13.3 36 6-41 152-187 (314)
278 2g1u_A Hypothetical protein TM 96.9 0.0011 3.8E-08 54.8 5.3 37 5-41 18-54 (155)
279 3k30_A Histamine dehydrogenase 96.8 0.0056 1.9E-07 63.3 11.2 100 7-158 524-625 (690)
280 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.0056 1.9E-07 63.0 10.8 46 108-158 584-629 (671)
281 1id1_A Putative potassium chan 96.7 0.0023 7.8E-08 52.7 5.6 35 5-39 2-36 (153)
282 1cjc_A Protein (adrenodoxin re 96.7 0.0092 3.1E-07 58.6 10.9 36 6-41 145-201 (460)
283 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0052 1.8E-07 59.9 8.8 34 6-39 212-246 (447)
284 2hmt_A YUAA protein; RCK, KTN, 96.6 0.002 6.7E-08 51.9 4.8 39 1-39 1-39 (144)
285 2gag_A Heterotetrameric sarcos 96.5 0.0062 2.1E-07 65.4 9.1 93 7-159 285-385 (965)
286 1gte_A Dihydropyrimidine dehyd 96.5 0.01 3.5E-07 64.1 10.6 32 8-39 334-366 (1025)
287 1lss_A TRK system potassium up 96.5 0.0025 8.4E-08 51.1 4.5 33 7-39 5-37 (140)
288 3fwz_A Inner membrane protein 96.4 0.0044 1.5E-07 50.2 5.5 34 7-40 8-41 (140)
289 4a9w_A Monooxygenase; baeyer-v 96.4 0.0027 9.2E-08 59.2 4.8 33 6-39 163-195 (357)
290 2vdc_G Glutamate synthase [NAD 96.4 0.0048 1.6E-07 60.5 6.6 36 6-41 264-300 (456)
291 2dpo_A L-gulonate 3-dehydrogen 96.3 0.003 1E-07 59.0 4.6 40 1-40 1-40 (319)
292 4e12_A Diketoreductase; oxidor 96.1 0.0052 1.8E-07 56.2 5.1 33 7-39 5-37 (283)
293 4gcm_A TRXR, thioredoxin reduc 96.1 0.0046 1.6E-07 56.9 4.6 35 7-41 146-180 (312)
294 3ado_A Lambda-crystallin; L-gu 96.1 0.0048 1.7E-07 57.4 4.6 39 1-39 1-39 (319)
295 3ic5_A Putative saccharopine d 95.9 0.0058 2E-07 47.3 4.0 33 7-39 6-39 (118)
296 1lqt_A FPRA; NADP+ derivative, 95.9 0.034 1.2E-06 54.4 10.0 36 6-41 147-203 (456)
297 3c85_A Putative glutathione-re 95.8 0.008 2.7E-07 50.9 4.5 34 6-39 39-73 (183)
298 3tl2_A Malate dehydrogenase; c 95.8 0.011 3.8E-07 55.0 5.7 36 4-39 6-42 (315)
299 3k96_A Glycerol-3-phosphate de 95.4 0.013 4.5E-07 55.4 5.0 34 6-39 29-62 (356)
300 3ghy_A Ketopantoate reductase 95.4 0.015 5.3E-07 54.4 5.3 32 7-38 4-35 (335)
301 3lk7_A UDP-N-acetylmuramoylala 95.4 0.015 5.2E-07 56.8 5.4 35 5-39 8-42 (451)
302 3i83_A 2-dehydropantoate 2-red 95.3 0.016 5.4E-07 53.9 5.1 33 7-39 3-35 (320)
303 3d0o_A L-LDH 1, L-lactate dehy 95.3 0.015 5.1E-07 54.1 4.7 39 1-39 1-41 (317)
304 3l4b_C TRKA K+ channel protien 95.3 0.014 4.8E-07 51.0 4.2 32 8-39 2-33 (218)
305 1f0y_A HCDH, L-3-hydroxyacyl-C 95.2 0.018 6.2E-07 53.0 5.2 33 7-39 16-48 (302)
306 1pzg_A LDH, lactate dehydrogen 95.1 0.023 7.9E-07 53.2 5.5 33 7-39 10-43 (331)
307 3mog_A Probable 3-hydroxybutyr 95.1 0.019 6.6E-07 56.6 5.1 39 1-40 1-39 (483)
308 2hjr_A Malate dehydrogenase; m 95.0 0.026 9E-07 52.7 5.6 33 7-39 15-48 (328)
309 3hn2_A 2-dehydropantoate 2-red 95.0 0.02 6.8E-07 53.0 4.7 31 8-38 4-34 (312)
310 3h8l_A NADH oxidase; membrane 94.9 0.057 2E-06 51.6 7.8 40 110-157 231-270 (409)
311 2ewd_A Lactate dehydrogenase,; 94.9 0.027 9.1E-07 52.3 5.2 33 7-39 5-38 (317)
312 1bg6_A N-(1-D-carboxylethyl)-L 94.9 0.022 7.6E-07 53.4 4.7 34 6-39 4-37 (359)
313 1t2d_A LDH-P, L-lactate dehydr 94.8 0.033 1.1E-06 51.9 5.8 33 7-39 5-38 (322)
314 3g0o_A 3-hydroxyisobutyrate de 94.8 0.025 8.4E-07 52.1 4.7 34 6-39 7-40 (303)
315 2y0c_A BCEC, UDP-glucose dehyd 94.8 0.023 7.8E-07 56.0 4.7 34 6-39 8-41 (478)
316 3dfz_A SIRC, precorrin-2 dehyd 94.7 0.033 1.1E-06 49.0 5.1 35 4-38 29-63 (223)
317 3gg2_A Sugar dehydrogenase, UD 94.7 0.025 8.6E-07 55.2 4.7 33 8-40 4-36 (450)
318 2ew2_A 2-dehydropantoate 2-red 94.7 0.026 8.7E-07 51.8 4.6 32 8-39 5-36 (316)
319 1ks9_A KPA reductase;, 2-dehyd 94.7 0.034 1.2E-06 50.4 5.3 32 8-39 2-33 (291)
320 2x5o_A UDP-N-acetylmuramoylala 94.7 0.028 9.5E-07 54.7 4.9 36 6-41 5-40 (439)
321 3sx6_A Sulfide-quinone reducta 94.6 0.13 4.4E-06 49.7 9.6 44 110-156 221-268 (437)
322 1ldn_A L-lactate dehydrogenase 94.6 0.034 1.2E-06 51.6 5.1 39 1-39 1-41 (316)
323 2raf_A Putative dinucleotide-b 94.6 0.04 1.4E-06 47.8 5.2 34 7-40 20-53 (209)
324 3fg2_P Putative rubredoxin red 94.5 0.073 2.5E-06 50.9 7.5 36 7-42 143-178 (404)
325 3gvi_A Malate dehydrogenase; N 94.5 0.044 1.5E-06 51.1 5.6 36 4-39 5-41 (324)
326 3g17_A Similar to 2-dehydropan 94.5 0.027 9.3E-07 51.6 4.1 32 8-39 4-35 (294)
327 3ggo_A Prephenate dehydrogenas 94.5 0.038 1.3E-06 51.2 5.2 34 6-39 33-68 (314)
328 4a7p_A UDP-glucose dehydrogena 94.5 0.04 1.4E-06 53.8 5.4 36 6-41 8-43 (446)
329 4dio_A NAD(P) transhydrogenase 94.4 0.044 1.5E-06 52.5 5.6 34 6-39 190-223 (405)
330 3lxd_A FAD-dependent pyridine 94.4 0.075 2.6E-06 51.0 7.4 37 6-42 152-188 (415)
331 3qsg_A NAD-binding phosphogluc 94.4 0.03 1E-06 51.8 4.3 34 6-39 24-58 (312)
332 3g79_A NDP-N-acetyl-D-galactos 94.4 0.038 1.3E-06 54.3 5.2 34 7-40 19-54 (478)
333 3vtf_A UDP-glucose 6-dehydroge 94.4 0.027 9.2E-07 54.7 4.0 33 7-39 22-54 (444)
334 3qha_A Putative oxidoreductase 94.3 0.034 1.2E-06 51.0 4.4 36 6-41 15-50 (296)
335 1y6j_A L-lactate dehydrogenase 94.3 0.047 1.6E-06 50.7 5.3 34 6-39 7-42 (318)
336 1lld_A L-lactate dehydrogenase 94.2 0.046 1.6E-06 50.5 5.2 33 7-39 8-42 (319)
337 1zk7_A HGII, reductase, mercur 94.2 0.043 1.5E-06 53.6 5.3 35 7-41 177-211 (467)
338 3p7m_A Malate dehydrogenase; p 94.2 0.057 2E-06 50.2 5.8 36 4-39 3-39 (321)
339 1kyq_A Met8P, siroheme biosynt 94.2 0.027 9.3E-07 51.1 3.5 35 5-39 12-46 (274)
340 3urh_A Dihydrolipoyl dehydroge 94.2 0.07 2.4E-06 52.5 6.7 37 6-42 198-234 (491)
341 4b1b_A TRXR, thioredoxin reduc 94.2 0.038 1.3E-06 55.3 4.7 35 6-40 223-257 (542)
342 3pqe_A L-LDH, L-lactate dehydr 94.1 0.045 1.5E-06 51.1 4.9 34 6-39 5-40 (326)
343 2uyy_A N-PAC protein; long-cha 94.1 0.061 2.1E-06 49.6 5.8 33 7-39 31-63 (316)
344 2q3e_A UDP-glucose 6-dehydroge 94.1 0.031 1.1E-06 54.8 3.9 33 7-39 6-40 (467)
345 3doj_A AT3G25530, dehydrogenas 94.1 0.049 1.7E-06 50.3 5.0 33 7-39 22-54 (310)
346 1evy_A Glycerol-3-phosphate de 94.0 0.025 8.4E-07 53.5 2.9 32 8-39 17-48 (366)
347 2zyd_A 6-phosphogluconate dehy 94.0 0.041 1.4E-06 54.2 4.5 36 4-39 13-48 (480)
348 3l6d_A Putative oxidoreductase 94.0 0.065 2.2E-06 49.4 5.6 34 6-39 9-42 (306)
349 4g65_A TRK system potassium up 94.0 0.02 6.8E-07 56.2 2.1 34 7-40 4-37 (461)
350 3pdu_A 3-hydroxyisobutyrate de 93.9 0.04 1.4E-06 50.2 4.1 33 8-40 3-35 (287)
351 4dll_A 2-hydroxy-3-oxopropiona 93.9 0.045 1.5E-06 50.8 4.4 33 7-39 32-64 (320)
352 2qyt_A 2-dehydropantoate 2-red 93.9 0.032 1.1E-06 51.3 3.5 31 7-37 9-45 (317)
353 3h28_A Sulfide-quinone reducta 93.8 0.23 7.8E-06 47.8 9.5 44 110-157 213-256 (430)
354 3c24_A Putative oxidoreductase 93.8 0.062 2.1E-06 48.9 5.1 33 7-39 12-45 (286)
355 3l9w_A Glutathione-regulated p 93.8 0.052 1.8E-06 52.4 4.8 34 7-40 5-38 (413)
356 1zcj_A Peroxisomal bifunctiona 93.8 0.053 1.8E-06 53.2 4.9 33 7-39 38-70 (463)
357 3p2y_A Alanine dehydrogenase/p 93.8 0.05 1.7E-06 51.7 4.5 36 5-40 183-218 (381)
358 3dtt_A NADP oxidoreductase; st 93.8 0.055 1.9E-06 48.1 4.6 36 5-40 18-53 (245)
359 1jw9_B Molybdopterin biosynthe 93.8 0.048 1.7E-06 48.8 4.2 33 7-39 32-65 (249)
360 3dhn_A NAD-dependent epimerase 93.8 0.057 1.9E-06 46.8 4.6 39 1-41 1-40 (227)
361 3pid_A UDP-glucose 6-dehydroge 93.7 0.05 1.7E-06 52.7 4.5 33 7-40 37-69 (432)
362 3pef_A 6-phosphogluconate dehy 93.7 0.065 2.2E-06 48.7 5.1 33 8-40 3-35 (287)
363 1mv8_A GMD, GDP-mannose 6-dehy 93.7 0.044 1.5E-06 53.3 4.1 32 8-39 2-33 (436)
364 3ego_A Probable 2-dehydropanto 93.7 0.065 2.2E-06 49.4 5.0 32 7-39 3-34 (307)
365 4huj_A Uncharacterized protein 93.6 0.039 1.3E-06 48.3 3.2 33 7-39 24-57 (220)
366 4e21_A 6-phosphogluconate dehy 93.6 0.06 2E-06 50.9 4.7 35 5-39 21-55 (358)
367 3lad_A Dihydrolipoamide dehydr 93.6 0.13 4.3E-06 50.3 7.3 36 6-41 180-215 (476)
368 2rcy_A Pyrroline carboxylate r 93.6 0.066 2.2E-06 47.9 4.8 34 7-40 5-42 (262)
369 3k6j_A Protein F01G10.3, confi 93.6 0.066 2.2E-06 52.3 5.0 34 7-40 55-88 (460)
370 4ffl_A PYLC; amino acid, biosy 93.5 0.1 3.6E-06 49.0 6.4 34 8-41 3-36 (363)
371 2v6b_A L-LDH, L-lactate dehydr 93.5 0.071 2.4E-06 49.1 5.1 32 8-39 2-35 (304)
372 1z82_A Glycerol-3-phosphate de 93.5 0.077 2.6E-06 49.5 5.2 34 6-39 14-47 (335)
373 3dgh_A TRXR-1, thioredoxin red 93.5 0.1 3.6E-06 51.1 6.4 101 7-160 188-292 (483)
374 2h78_A Hibadh, 3-hydroxyisobut 93.4 0.058 2E-06 49.4 4.3 32 8-39 5-36 (302)
375 1zej_A HBD-9, 3-hydroxyacyl-CO 93.4 0.066 2.3E-06 49.1 4.5 33 6-39 12-44 (293)
376 3ktd_A Prephenate dehydrogenas 93.4 0.079 2.7E-06 49.7 5.1 33 7-39 9-41 (341)
377 3hwr_A 2-dehydropantoate 2-red 93.4 0.063 2.2E-06 49.7 4.4 31 7-38 20-50 (318)
378 3gpi_A NAD-dependent epimerase 93.4 0.099 3.4E-06 47.2 5.7 35 7-41 4-38 (286)
379 3tri_A Pyrroline-5-carboxylate 93.3 0.098 3.4E-06 47.5 5.6 33 7-39 4-39 (280)
380 1ur5_A Malate dehydrogenase; o 93.3 0.093 3.2E-06 48.5 5.5 32 8-39 4-36 (309)
381 2o3j_A UDP-glucose 6-dehydroge 93.3 0.052 1.8E-06 53.5 3.9 33 7-39 10-44 (481)
382 1xdi_A RV3303C-LPDA; reductase 93.3 0.16 5.5E-06 50.0 7.4 35 7-41 183-217 (499)
383 3oj0_A Glutr, glutamyl-tRNA re 93.2 0.035 1.2E-06 44.9 2.1 33 7-39 22-54 (144)
384 1guz_A Malate dehydrogenase; o 93.2 0.093 3.2E-06 48.5 5.3 32 8-39 2-35 (310)
385 1x13_A NAD(P) transhydrogenase 93.2 0.089 3E-06 50.5 5.3 35 6-40 172-206 (401)
386 1l7d_A Nicotinamide nucleotide 93.2 0.1 3.4E-06 49.8 5.6 34 6-39 172-205 (384)
387 3eag_A UDP-N-acetylmuramate:L- 93.2 0.089 3E-06 49.0 5.1 32 8-39 6-38 (326)
388 2izz_A Pyrroline-5-carboxylate 93.1 0.093 3.2E-06 48.7 5.1 35 5-39 21-59 (322)
389 3dfu_A Uncharacterized protein 93.0 0.034 1.2E-06 49.2 1.8 33 6-38 6-38 (232)
390 1x0v_A GPD-C, GPDH-C, glycerol 93.0 0.048 1.6E-06 51.2 3.0 35 6-40 8-49 (354)
391 3cky_A 2-hydroxymethyl glutara 93.0 0.074 2.5E-06 48.6 4.2 33 7-39 5-37 (301)
392 4gwg_A 6-phosphogluconate dehy 92.9 0.11 3.6E-06 51.2 5.4 35 6-40 4-38 (484)
393 4ezb_A Uncharacterized conserv 92.9 0.095 3.2E-06 48.6 4.8 34 7-40 25-59 (317)
394 2vns_A Metalloreductase steap3 92.9 0.12 4E-06 45.0 5.1 33 7-39 29-61 (215)
395 1pjc_A Protein (L-alanine dehy 92.8 0.08 2.7E-06 50.1 4.3 34 6-39 167-200 (361)
396 2g5c_A Prephenate dehydrogenas 92.8 0.094 3.2E-06 47.4 4.7 32 8-39 3-36 (281)
397 2iz1_A 6-phosphogluconate dehy 92.7 0.099 3.4E-06 51.4 4.9 34 6-39 5-38 (474)
398 1txg_A Glycerol-3-phosphate de 92.7 0.071 2.4E-06 49.4 3.7 30 8-37 2-31 (335)
399 2cvz_A Dehydrogenase, 3-hydrox 92.7 0.098 3.3E-06 47.4 4.5 31 8-39 3-33 (289)
400 1hdo_A Biliverdin IX beta redu 92.7 0.14 4.7E-06 43.4 5.3 34 7-40 4-38 (206)
401 1dlj_A UDP-glucose dehydrogena 92.6 0.072 2.5E-06 51.2 3.7 31 8-39 2-32 (402)
402 4dna_A Probable glutathione re 92.6 0.23 7.7E-06 48.4 7.4 36 6-41 170-205 (463)
403 3d1l_A Putative NADP oxidoredu 92.5 0.078 2.7E-06 47.5 3.7 33 7-39 11-44 (266)
404 2p4q_A 6-phosphogluconate dehy 92.5 0.14 4.7E-06 50.7 5.7 34 7-40 11-44 (497)
405 3e8x_A Putative NAD-dependent 92.5 0.13 4.4E-06 44.9 5.0 36 4-39 19-55 (236)
406 2eez_A Alanine dehydrogenase; 92.4 0.11 3.8E-06 49.2 4.7 34 6-39 166-199 (369)
407 2aef_A Calcium-gated potassium 92.4 0.054 1.8E-06 47.7 2.3 34 6-40 9-42 (234)
408 1hyh_A L-hicdh, L-2-hydroxyiso 92.4 0.11 3.7E-06 48.0 4.4 32 8-39 3-36 (309)
409 1vpd_A Tartronate semialdehyde 92.3 0.1 3.4E-06 47.6 4.1 33 7-39 6-38 (299)
410 2a9f_A Putative malic enzyme ( 92.2 0.12 4.1E-06 49.1 4.6 36 4-39 186-222 (398)
411 1nyt_A Shikimate 5-dehydrogena 92.2 0.17 5.7E-06 45.7 5.5 35 5-39 118-152 (271)
412 2f1k_A Prephenate dehydrogenas 92.2 0.12 4.2E-06 46.5 4.6 32 8-39 2-33 (279)
413 3o0h_A Glutathione reductase; 92.2 0.14 4.8E-06 50.2 5.3 36 6-41 191-226 (484)
414 2pv7_A T-protein [includes: ch 92.2 0.14 4.8E-06 46.9 5.0 32 8-39 23-55 (298)
415 3q2o_A Phosphoribosylaminoimid 92.0 0.28 9.4E-06 46.6 7.0 36 6-41 14-49 (389)
416 2vhw_A Alanine dehydrogenase; 92.0 0.13 4.5E-06 48.9 4.7 35 5-39 167-201 (377)
417 3rui_A Ubiquitin-like modifier 92.0 0.17 5.7E-06 47.3 5.2 36 6-41 34-70 (340)
418 4e4t_A Phosphoribosylaminoimid 92.0 0.22 7.5E-06 48.0 6.3 37 4-40 33-69 (419)
419 2pd4_A Enoyl-[acyl-carrier-pro 91.9 0.17 5.9E-06 45.4 5.2 39 1-39 1-42 (275)
420 3h8v_A Ubiquitin-like modifier 91.9 0.11 3.9E-06 47.5 3.9 36 5-40 35-71 (292)
421 3vps_A TUNA, NAD-dependent epi 91.9 0.19 6.4E-06 45.8 5.5 35 6-40 7-42 (321)
422 1yj8_A Glycerol-3-phosphate de 91.9 0.11 3.7E-06 49.3 3.9 33 8-40 23-62 (375)
423 3vku_A L-LDH, L-lactate dehydr 91.8 0.15 5.2E-06 47.4 4.8 36 4-39 7-44 (326)
424 1oju_A MDH, malate dehydrogena 91.8 0.1 3.5E-06 47.9 3.5 32 8-39 2-35 (294)
425 1jay_A Coenzyme F420H2:NADP+ o 91.7 0.17 5.8E-06 43.5 4.8 32 8-39 2-34 (212)
426 1a5z_A L-lactate dehydrogenase 91.7 0.14 4.6E-06 47.6 4.3 32 8-39 2-35 (319)
427 3gt0_A Pyrroline-5-carboxylate 91.7 0.18 6.2E-06 44.7 5.0 32 8-39 4-39 (247)
428 1zud_1 Adenylyltransferase THI 91.7 0.16 5.6E-06 45.3 4.7 35 6-40 28-63 (251)
429 2gf2_A Hibadh, 3-hydroxyisobut 91.7 0.17 5.7E-06 46.0 4.9 32 8-39 2-33 (296)
430 4b63_A L-ornithine N5 monooxyg 91.7 0.99 3.4E-05 44.4 10.8 35 7-41 247-283 (501)
431 1vl6_A Malate oxidoreductase; 91.6 0.16 5.3E-06 48.2 4.6 36 4-39 190-226 (388)
432 3ojo_A CAP5O; rossmann fold, c 91.6 0.12 4.1E-06 50.0 3.9 34 7-40 12-45 (431)
433 1yqg_A Pyrroline-5-carboxylate 91.5 0.13 4.5E-06 45.9 3.9 32 8-39 2-34 (263)
434 3fi9_A Malate dehydrogenase; s 91.5 0.23 7.8E-06 46.6 5.6 36 4-39 6-44 (343)
435 1pjq_A CYSG, siroheme synthase 91.4 0.18 6.1E-06 49.3 5.0 34 5-38 11-44 (457)
436 2egg_A AROE, shikimate 5-dehyd 91.4 0.22 7.4E-06 45.7 5.3 34 6-39 141-175 (297)
437 3phh_A Shikimate dehydrogenase 91.4 0.24 8.3E-06 44.7 5.4 33 7-39 119-151 (269)
438 2we8_A Xanthine dehydrogenase; 91.4 0.31 1E-05 46.4 6.4 38 5-42 203-240 (386)
439 2wtb_A MFP2, fatty acid multif 91.3 0.16 5.5E-06 52.6 4.8 33 8-40 314-346 (725)
440 2pgd_A 6-phosphogluconate dehy 91.3 0.2 6.8E-06 49.3 5.2 33 7-39 3-35 (482)
441 3nep_X Malate dehydrogenase; h 91.3 0.16 5.4E-06 47.1 4.3 32 8-39 2-35 (314)
442 3ond_A Adenosylhomocysteinase; 91.3 0.19 6.5E-06 49.2 5.0 35 5-39 264-298 (488)
443 3ius_A Uncharacterized conserv 91.2 0.17 5.7E-06 45.5 4.2 33 7-39 6-38 (286)
444 4gx0_A TRKA domain protein; me 91.0 0.21 7.3E-06 50.0 5.2 36 7-42 349-384 (565)
445 3b1f_A Putative prephenate deh 91.0 0.16 5.5E-06 46.1 3.9 33 7-39 7-41 (290)
446 3c7a_A Octopine dehydrogenase; 91.0 0.12 4.3E-06 49.3 3.3 30 8-37 4-34 (404)
447 1qyc_A Phenylcoumaran benzylic 90.8 0.26 9E-06 44.7 5.2 32 8-39 6-38 (308)
448 3ldh_A Lactate dehydrogenase; 90.7 0.21 7.3E-06 46.5 4.6 33 7-39 22-56 (330)
449 3h5n_A MCCB protein; ubiquitin 90.7 0.2 6.7E-06 47.2 4.4 35 6-40 118-153 (353)
450 4aj2_A L-lactate dehydrogenase 90.7 0.28 9.6E-06 45.7 5.4 35 5-39 18-54 (331)
451 3orq_A N5-carboxyaminoimidazol 90.6 0.33 1.1E-05 45.9 6.0 36 5-40 11-46 (377)
452 4gbj_A 6-phosphogluconate dehy 90.6 0.19 6.3E-06 46.2 4.0 36 7-42 6-41 (297)
453 3o38_A Short chain dehydrogena 90.6 0.23 7.7E-06 44.3 4.5 36 4-39 20-57 (266)
454 3gvp_A Adenosylhomocysteinase 90.6 0.25 8.5E-06 47.6 5.0 35 5-39 219-253 (435)
455 3nrc_A Enoyl-[acyl-carrier-pro 90.6 0.26 8.9E-06 44.4 5.0 39 1-39 21-62 (280)
456 1np3_A Ketol-acid reductoisome 90.5 0.31 1.1E-05 45.5 5.5 33 7-39 17-49 (338)
457 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.4 0.22 7.5E-06 48.9 4.6 32 8-39 3-34 (478)
458 2d1y_A Hypothetical protein TT 90.4 0.37 1.3E-05 42.7 5.8 40 1-40 1-41 (256)
459 3d4o_A Dipicolinate synthase s 90.4 0.31 1E-05 44.5 5.3 35 5-39 154-188 (293)
460 3ew7_A LMO0794 protein; Q8Y8U8 90.4 0.27 9.4E-06 42.0 4.7 32 8-39 2-34 (221)
461 1wdk_A Fatty oxidation complex 90.4 0.22 7.4E-06 51.5 4.7 34 7-40 315-348 (715)
462 3slg_A PBGP3 protein; structur 90.3 0.25 8.7E-06 46.2 4.8 38 4-41 22-61 (372)
463 2h7i_A Enoyl-[acyl-carrier-pro 90.3 0.29 9.8E-06 43.8 5.0 37 3-39 4-43 (269)
464 3ce6_A Adenosylhomocysteinase; 90.2 0.26 9E-06 48.5 5.0 34 6-39 274-307 (494)
465 1cyd_A Carbonyl reductase; sho 90.2 0.35 1.2E-05 42.2 5.4 37 3-39 4-41 (244)
466 1p77_A Shikimate 5-dehydrogena 90.2 0.24 8.1E-06 44.8 4.3 34 6-39 119-152 (272)
467 2zqz_A L-LDH, L-lactate dehydr 90.2 0.27 9.3E-06 45.7 4.8 36 4-39 7-44 (326)
468 2rir_A Dipicolinate synthase, 90.1 0.34 1.2E-05 44.3 5.4 35 5-39 156-190 (300)
469 2i6t_A Ubiquitin-conjugating e 90.1 0.24 8.4E-06 45.5 4.3 34 7-40 15-50 (303)
470 1qsg_A Enoyl-[acyl-carrier-pro 90.0 0.3 1E-05 43.6 4.8 36 4-39 7-45 (265)
471 1b37_A Protein (polyamine oxid 90.0 0.37 1.3E-05 46.9 5.8 37 5-41 3-40 (472)
472 1o94_A Tmadh, trimethylamine d 90.0 0.2 6.9E-06 51.9 4.1 33 7-39 529-563 (729)
473 1b8p_A Protein (malate dehydro 89.9 0.22 7.4E-06 46.4 3.9 33 6-38 5-45 (329)
474 3rkr_A Short chain oxidoreduct 89.9 0.3 1E-05 43.5 4.7 39 1-39 24-63 (262)
475 1qyd_A Pinoresinol-lariciresin 89.8 0.35 1.2E-05 43.9 5.3 32 8-39 6-38 (313)
476 4id9_A Short-chain dehydrogena 89.8 0.34 1.2E-05 44.8 5.2 36 6-41 19-55 (347)
477 4gsl_A Ubiquitin-like modifier 89.8 0.32 1.1E-05 48.9 5.2 36 6-41 326-362 (615)
478 3d3w_A L-xylulose reductase; u 89.7 0.45 1.6E-05 41.5 5.7 36 4-39 5-41 (244)
479 3don_A Shikimate dehydrogenase 89.7 0.28 9.6E-06 44.5 4.4 36 6-41 117-153 (277)
480 1yb4_A Tartronic semialdehyde 89.7 0.21 7.2E-06 45.3 3.6 31 8-39 5-35 (295)
481 1ez4_A Lactate dehydrogenase; 89.6 0.28 9.6E-06 45.4 4.4 34 6-39 5-40 (318)
482 2ahr_A Putative pyrroline carb 89.6 0.26 8.7E-06 43.9 4.0 32 8-39 5-36 (259)
483 2d4a_B Malate dehydrogenase; a 89.5 0.31 1.1E-05 44.9 4.6 32 8-39 1-33 (308)
484 3h2s_A Putative NADH-flavin re 89.5 0.34 1.2E-05 41.6 4.6 32 8-39 2-34 (224)
485 2x6t_A ADP-L-glycero-D-manno-h 89.4 0.38 1.3E-05 44.8 5.2 35 6-40 46-82 (357)
486 2d5c_A AROE, shikimate 5-dehyd 89.4 0.45 1.5E-05 42.6 5.5 34 5-39 116-149 (263)
487 2z1m_A GDP-D-mannose dehydrata 89.4 0.41 1.4E-05 44.0 5.4 34 7-40 4-38 (345)
488 2hk9_A Shikimate dehydrogenase 89.4 0.29 9.8E-06 44.2 4.2 33 7-39 130-162 (275)
489 4fs3_A Enoyl-[acyl-carrier-pro 89.3 0.45 1.5E-05 42.3 5.4 39 1-39 1-42 (256)
490 4b4o_A Epimerase family protei 89.3 0.39 1.3E-05 43.4 5.1 33 8-40 2-35 (298)
491 3jyo_A Quinate/shikimate dehyd 89.3 0.47 1.6E-05 43.1 5.6 35 5-39 126-161 (283)
492 3vh1_A Ubiquitin-like modifier 89.1 0.36 1.2E-05 48.4 5.0 36 6-41 327-363 (598)
493 1i36_A Conserved hypothetical 89.1 0.32 1.1E-05 43.3 4.3 30 8-37 2-31 (264)
494 2ag5_A DHRS6, dehydrogenase/re 89.1 0.4 1.4E-05 42.1 4.9 39 1-39 1-40 (246)
495 3u62_A Shikimate dehydrogenase 89.0 0.46 1.6E-05 42.4 5.2 33 8-40 110-143 (253)
496 3oig_A Enoyl-[acyl-carrier-pro 89.0 0.52 1.8E-05 41.9 5.6 39 1-39 1-43 (266)
497 1leh_A Leucine dehydrogenase; 89.0 0.49 1.7E-05 44.6 5.6 34 5-38 172-205 (364)
498 1nvt_A Shikimate 5'-dehydrogen 88.9 0.35 1.2E-05 43.9 4.4 33 6-39 128-160 (287)
499 3tnl_A Shikimate dehydrogenase 88.9 0.5 1.7E-05 43.7 5.5 34 6-39 154-188 (315)
500 1edz_A 5,10-methylenetetrahydr 88.8 0.42 1.4E-05 44.2 4.9 35 5-39 176-211 (320)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.97 E-value=7.6e-31 Score=256.82 Aligned_cols=304 Identities=16% Similarity=0.207 Sum_probs=183.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
++++||+||||||+||++|+.|+++|++|+||||.+.+... ++++ .+++++.++|+++|+++.+...+.+....
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~----~~~~--~l~~~~~~~l~~lg~~~~~~~~~~~~~~~ 94 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPV----GAAI--SVWPNGVKCMAHLGMGDIMETFGGPLRRM 94 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--------CEE--EECHHHHHHHHHTTCHHHHHHHSCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----CeeE--EECHHHHHHHHHCCCHHHHHhhcCCCcce
Confidence 55799999999999999999999999999999999866433 5665 68999999999999999998888888888
Q ss_pred EEEecC-CcE-EEeeCC-------CC---CcH----H-HHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEee
Q psy9141 84 MIHGQN-GKL-REIPYD-------PV---HNQ----V-ELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDN 146 (379)
Q Consensus 84 ~~~~~~-g~~-~~~~~~-------~~---~~~----~-~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~a 146 (379)
.+++.. |.. ..+++. .. ..+ . .......++|+++++|++++.+++++++++. +|++ ++|
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~g~~---~~a 170 (407)
T 3rp8_A 95 AYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFT-DGSS---ASG 170 (407)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEET-TSCE---EEE
T ss_pred EEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEc-CCCE---Eee
Confidence 888876 543 233321 11 111 1 1111112899999999999999999999999 8987 999
Q ss_pred cEEEecCCCChHHHHHhhhcC-CCCccceeeeeeeEEEeeCCCCCccccccccceeeecCCCCeEEEEEecCCCceeee-
Q psy9141 147 QLIIGADGAYSGVRKCLMKQS-MFNYSQTYIEHGYMELCIPPSEDNEVWLYKNRLLSSVPEVRKRISLRAQSLKSLMNF- 224 (379)
Q Consensus 147 dlVV~AdG~~S~vr~~l~~~~-~~~~~~~~i~~~~~~~~~p~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~- 224 (379)
|+||+|||.+|.+|+++.+.. ...+........ ....+.... .+.....++.+. ..+.+.|...+.+.++
T Consensus 171 ~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~ 242 (407)
T 3rp8_A 171 DLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNG--LVEIDEALA-----PGDQWTTFVGEG-KQVSLMPVSAGRFYFFF 242 (407)
T ss_dssp SEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEE--EEECCTTTC-----CTTEEEEEEETT-EEEEEEEETTTEEEEEE
T ss_pred CEEEECCCcChHHHHHhcCCCCCCcccCcEEEEE--EEecccccC-----CCCceEEEECCC-cEEEEEEcCCCeEEEEE
Confidence 999999999999999984332 222222111111 111221000 011112221122 2344555554443321
Q ss_pred --cCCCC----CCChhhhcccc--ccccc---ccCCcccC----CCccccCCCCCccccCCcEEEe-eecccCCCcchhh
Q psy9141 225 --PRADQ----GGDKRDCLLHE--GTSRI---LVPNMRLS----NHLDRDQPCKPLLDFKNPIKIQ-SHAVVNEFYKQES 288 (379)
Q Consensus 225 --p~~~~----~~~~~~~l~~~--g~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~liG-Ah~~~~P~~GQG~ 288 (379)
+.+.. .....+.+.+. ++... +....... .......+...|. ..|++++| |++.++|++|||+
T Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~rv~LvGDAAh~~~P~~GqG~ 321 (407)
T 3rp8_A 243 DVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLV-RGRVALLGDAGHSTTPDIGQGG 321 (407)
T ss_dssp EEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCE-ETTEEECGGGTCCCCGGGSCHH
T ss_pred EeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCcee-cCCEEEEEcccccCCcchhhhH
Confidence 21111 11111222111 11000 00000000 0001112234554 35899999 5555569999999
Q ss_pred hhHHHHHHHHHHhhcc------ccccccccc-------hhhhhheeeeEEe
Q psy9141 289 LIVASLCQEKIEKMFD------NTSTYKSRH-------INFIHRSYHLYTV 326 (379)
Q Consensus 289 n~gl~Da~~L~~~l~~------~~~~~~~~~-------~~~~~~~~~~~t~ 326 (379)
|+|++||..|+++|.+ .+.+|++++ +..++.+..+|..
T Consensus 322 ~~al~da~~La~~L~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 372 (407)
T 3rp8_A 322 CAAMEDAVVLGAVFRQTRDIAAALREYEAQRCDRVRDLVLKARKRCDITHG 372 (407)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 9999999999999975 345677765 3444444445543
No 2
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.97 E-value=1.3e-30 Score=265.59 Aligned_cols=310 Identities=16% Similarity=0.062 Sum_probs=180.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
++||+||||||+||++|+.|+++|++|+||||.+.+... ++++ ++++++.++|+++|+|+.+...+.......
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~----~r~~--~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~- 121 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGH----DRAG--ALHIRTVETLDLRGLLDRFLEGTQVAKGLP- 121 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCS----SSCC--CBCHHHHHHHHTTTCHHHHTTSCCBCSBCC-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCC----ceEE--EECHHHHHHHHHcCChHHHHhcCcccCCce-
Confidence 589999999999999999999999999999999876533 5555 689999999999999999987654433210
Q ss_pred EecCCc---E-------EEeeCCCCCcH-------HHHhcCCCCeEEeCceEEEEEecCCeEEEEE--ccCCceeEEEee
Q psy9141 86 HGQNGK---L-------REIPYDPVHNQ-------VELEQYPDCNIYFQHKLINLDVNSGNVTFYR--TEDNSETKITDN 146 (379)
Q Consensus 86 ~~~~g~---~-------~~~~~~~~~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~--~~~G~~~~~i~a 146 (379)
+ .+. . ...++.....+ ....+..|++|+++++|++++.+++++++++ . +|+ .+ ++|
T Consensus 122 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~-~G~-~~-~~a 196 (570)
T 3fmw_A 122 F--AGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGP-SGP-YP-VRA 196 (570)
T ss_dssp B--TTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEET-TEE-EE-EEE
T ss_pred e--CCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeC-CCc-EE-EEe
Confidence 1 111 0 01111111122 1112224899999999999999999988887 5 772 23 999
Q ss_pred cEEEecCCCChHHHHHh-hhcCCCCccceeeeeeeEEEeeCCCCCcccc--ccccceeeecCCCCeEEEE-EecCCCc--
Q psy9141 147 QLIIGADGAYSGVRKCL-MKQSMFNYSQTYIEHGYMELCIPPSEDNEVW--LYKNRLLSSVPEVRKRISL-RAQSLKS-- 220 (379)
Q Consensus 147 dlVV~AdG~~S~vr~~l-~~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~--~~p~~~~~~~p~~~~~~~~-~~~~~~~-- 220 (379)
|+||+|||.+|.+|+++ ++.+...+.+.++. ..+..+... -.+. ..|... +.+ +|...+.
T Consensus 197 ~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~---~~v~~~~~~-~~~~~~~~~~G~----------~~~~~P~~~g~~~ 262 (570)
T 3fmw_A 197 RYGVGCDGGRSTVRRLAADRFPGTEATVRALI---GYVTTPERE-VPRRWERTPDGI----------LVLAFPPEGGLGP 262 (570)
T ss_dssp SEEEECSCSSCHHHHHTTCCCCCCCCCEEEEE---EECCCCSCS-SCCCCCCCCSSC----------EEECCCC------
T ss_pred CEEEEcCCCCchHHHHcCCCCccceeeeEEEE---EEEEecCCC-cceEEEecCCEE----------EEEEeecCCCeEE
Confidence 99999999999999998 66666666665431 121111100 0111 111111 111 2222221
Q ss_pred -eee-ecCCC----CCCChhhhcccc--cccccccCCccc----CCCccccCCCCCccccCCcEEEe-eecccCCCcchh
Q psy9141 221 -LMN-FPRAD----QGGDKRDCLLHE--GTSRILVPNMRL----SNHLDRDQPCKPLLDFKNPIKIQ-SHAVVNEFYKQE 287 (379)
Q Consensus 221 -~~~-~p~~~----~~~~~~~~l~~~--g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~liG-Ah~~~~P~~GQG 287 (379)
+.. .+... ......+.+... ..+......... ..+.........|. ..|++++| |++.++|++|||
T Consensus 263 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~grv~LvGDAAH~~~P~~GqG 341 (570)
T 3fmw_A 263 GWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYR-SGRVLLAGDAAHVHFPIGGQG 341 (570)
T ss_dssp CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCCCCSCCEEEEEECCCCEECSCSE-ETTEEECGGGTEECCCCSSCH
T ss_pred EEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccccceeeeeeEEeecccccccccc-cCCEEEEEecceecCCCcCcC
Confidence 111 11111 011111111111 000000000000 00011112233343 34899999 555556999999
Q ss_pred hhhHHHHHHHHHHhhcc---------ccccccccc-------hhhhhheeeeEEeeecccccchhhHHHHHHhhh
Q psy9141 288 SLIVASLCQEKIEKMFD---------NTSTYKSRH-------INFIHRSYHLYTVDIGVHKVTESSILNLLLRGM 346 (379)
Q Consensus 288 ~n~gl~Da~~L~~~l~~---------~~~~~~~~~-------~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 346 (379)
+|+|++|+.+|+++|.+ .+.+|++++ +.+++.+..+|+.+.++ -..+-|+++.-+
T Consensus 342 ~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~----~~~lR~~~~~l~ 412 (570)
T 3fmw_A 342 LNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQH----TTPLRGFVEELL 412 (570)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTT----HHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH----HHHHHHHHHHHh
Confidence 99999999999999865 345688775 44555555677664321 235566666654
No 3
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.96 E-value=3.4e-29 Score=244.07 Aligned_cols=150 Identities=20% Similarity=0.273 Sum_probs=107.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhC---CCCc-ee
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAH---GIPM-RA 82 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~---~~~~-~~ 82 (379)
.+|+||||||+||++|+.|+++|++|+||||++.+... ..|.++ .++++++++|+++|+.+.+... .... ..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~--~~G~~i--~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~ 77 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSI--LPGYGI--HINSFGKQALQECLPAENWLAFEEASRYIGGQ 77 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSS--CCCCEE--EECHHHHHHHHHHSCHHHHHHHHHHCEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcC--CCceEE--eeCHHHHHHHHHcCChHHHHHhhhhhcccCcc
Confidence 37999999999999999999999999999999876543 235555 6889999999999987765431 1111 11
Q ss_pred eEEEecCCcEEEeeC----------CCC---CcH----HHHhcCCCCeEEeCceEEEEEecCC-eEEEEEccCCceeEEE
Q psy9141 83 RMIHGQNGKLREIPY----------DPV---HNQ----VELEQYPDCNIYFQHKLINLDVNSG-NVTFYRTEDNSETKIT 144 (379)
Q Consensus 83 ~~~~~~~g~~~~~~~----------~~~---~~~----~~~~~~~gv~i~~~~~v~~i~~~~~-~v~v~~~~~G~~~~~i 144 (379)
..+++..+....... ... ..+ ..+.+..+.+|++++++++++..++ +++++++ ||++ +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~-dG~~---~ 153 (412)
T 4hb9_A 78 SRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFA-DGSH---E 153 (412)
T ss_dssp CEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEET-TSCE---E
T ss_pred eeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEEC-CCCE---E
Confidence 223333222211000 000 011 2333444567999999999987654 6899999 9988 9
Q ss_pred eecEEEecCCCChHHHHHhh
Q psy9141 145 DNQLIIGADGAYSGVRKCLM 164 (379)
Q Consensus 145 ~adlVV~AdG~~S~vr~~l~ 164 (379)
+||+||+|||.+|.+|+++.
T Consensus 154 ~adlvVgADG~~S~vR~~l~ 173 (412)
T 4hb9_A 154 NVDVLVGADGSNSKVRKQYL 173 (412)
T ss_dssp EESEEEECCCTTCHHHHHHS
T ss_pred EeeEEEECCCCCcchHHHhC
Confidence 99999999999999999984
No 4
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.96 E-value=2e-29 Score=253.31 Aligned_cols=280 Identities=14% Similarity=0.076 Sum_probs=165.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
+++||+||||||+||++|+.|+++|++|+||||.+.+... ++++ .++++++++|+++|+++++... .+.....
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~--~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~ 83 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE----SRGL--GFTARTMEVFDQRGILPAFGPV-ETSTQGH 83 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCC----CCSE--EECHHHHHHHHHTTCGGGGCSC-CEESEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCC----Ccee--EECHHHHHHHHHCCCHHHHHhc-cccccce
Confidence 4689999999999999999999999999999999876533 5554 6899999999999999887654 2222111
Q ss_pred EEecCCcEEEeeCC-----C----CCcH--------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCc-eeEEEee
Q psy9141 85 IHGQNGKLREIPYD-----P----VHNQ--------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNS-ETKITDN 146 (379)
Q Consensus 85 ~~~~~g~~~~~~~~-----~----~~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~-~~~~i~a 146 (379)
+ .+. .+++. . ...+ +.+.+ .+++|+++++|++++++++++++++. +|+ +.+ ++|
T Consensus 84 ~---~~~--~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~v~v~~~-~~~g~~~-~~a 155 (499)
T 2qa2_A 84 F---GGR--PVDFGVLEGAHYGVKAVPQSTTESVLEEWALG-RGAELLRGHTVRALTDEGDHVVVEVE-GPDGPRS-LTT 155 (499)
T ss_dssp E---TTE--EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHH-TTCEEEESCEEEEEEECSSCEEEEEE-CSSCEEE-EEE
T ss_pred e---cce--ecccccCCCCCCceEecCHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEeCCEEEEEEE-cCCCcEE-EEe
Confidence 1 111 11110 1 1122 22233 48999999999999999999998887 653 234 999
Q ss_pred cEEEecCCCChHHHHHh-hhcCCCCccceeeeeeeEEEeeCCCCCccccccccceeee-cCCCCeEEEEEecCCCc--ee
Q psy9141 147 QLIIGADGAYSGVRKCL-MKQSMFNYSQTYIEHGYMELCIPPSEDNEVWLYKNRLLSS-VPEVRKRISLRAQSLKS--LM 222 (379)
Q Consensus 147 dlVV~AdG~~S~vr~~l-~~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~p~~~~~~-~p~~~~~~~~~~~~~~~--~~ 222 (379)
|+||+|||.+|.+|+++ ++.+...+.+.++. ..+..+..+.. ...+ .|+ ..+.+.|...+. +.
T Consensus 156 ~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~---~~v~~~~~~~~--------~~~~~~~~--g~~~~~P~~~g~~~~~ 222 (499)
T 2qa2_A 156 RYVVGCDGGRSTVRKAAGFDFPGTSASREMFL---ADIRGCEITPR--------PIGETVPL--GMVMSAPLGDGVDRII 222 (499)
T ss_dssp EEEEECCCTTCHHHHHTTCCCCEECCCCCEEE---EEEESCCCCCE--------EEEEEETT--EEEEEEECSSSCEEEE
T ss_pred CEEEEccCcccHHHHHcCCCCCCCCCccEEEE---EEEEECCCCcc--------eEEEECCC--eEEEEEEcCCCEEEEE
Confidence 99999999999999998 55544444443321 12212110110 1111 122 233444443332 11
Q ss_pred ee-cCCCC----CCChhhhcccc-----cccccccCCcc-cCCCccccCCCCCccccCCcEEEe-eecccCCCcchhhhh
Q psy9141 223 NF-PRADQ----GGDKRDCLLHE-----GTSRILVPNMR-LSNHLDRDQPCKPLLDFKNPIKIQ-SHAVVNEFYKQESLI 290 (379)
Q Consensus 223 ~~-p~~~~----~~~~~~~l~~~-----g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~liG-Ah~~~~P~~GQG~n~ 290 (379)
.. +.+.. .....+.+... +. ........ ...+.........|. ..|++|+| |++.++|+.|||+|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~-~grv~L~GDAAH~~~P~~GqG~n~ 300 (499)
T 2qa2_A 223 VCERGAPARRRTGPPPYQEVAAAWQRLTGQ-DISHGEPVWVSAFGDPARQVSAYR-RGRVLLAGDSAHVHLPAGGQGMNV 300 (499)
T ss_dssp EEETTCCCCCCSSSCCHHHHHHHHHHHHSC-CCTTCEEEEEEEECCCEEECSCSE-ETTEEECGGGTEEECCCSSCHHHH
T ss_pred EEecCCCCccccCCCCHHHHHHHHHHHhCC-CCCccceeEEEEEeCCcEEccccc-CCCEEEEecccccCCCccccchhh
Confidence 11 11110 00111111111 00 00000000 000011112234444 34899999 444445999999999
Q ss_pred HHHHHHHHHHhhcc---------ccccccccch
Q psy9141 291 VASLCQEKIEKMFD---------NTSTYKSRHI 314 (379)
Q Consensus 291 gl~Da~~L~~~l~~---------~~~~~~~~~~ 314 (379)
|++||.+|+++|.+ .+.+|++++.
T Consensus 301 gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~ 333 (499)
T 2qa2_A 301 SVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERH 333 (499)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 99999999999865 3446877763
No 5
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.96 E-value=1.9e-28 Score=249.00 Aligned_cols=294 Identities=16% Similarity=0.119 Sum_probs=170.8
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
|+.+.++||+||||||+||++|+.|+++|++|+||||.+..... ++++ .++++++++|+++|+++++.+.+.+.
T Consensus 21 M~~~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~----~~~~--~l~~~~~~~l~~lGl~~~~~~~~~~~ 94 (549)
T 2r0c_A 21 MNAPIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITH----PRVG--TIGPRSMELFRRWGVAKQIRTAGWPG 94 (549)
T ss_dssp -CCCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSS----CCCC--EECHHHHHHHHHTTCHHHHHTSSCCT
T ss_pred cCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----Ccee--eeCHHHHHHHHHcCChHHHHhhcCCc
Confidence 43344689999999999999999999999999999999866433 4444 68899999999999999998876665
Q ss_pred ee---eEEE-ecCCcE-EEeeCCC------------C---CcH--------HHHhcCCCCeEEeCceEEEEEecCCeEEE
Q psy9141 81 RA---RMIH-GQNGKL-REIPYDP------------V---HNQ--------VELEQYPDCNIYFQHKLINLDVNSGNVTF 132 (379)
Q Consensus 81 ~~---~~~~-~~~g~~-~~~~~~~------------~---~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v 132 (379)
.. ..+. ...|.. ..+++.. . ..+ +.+.+. |+++++|+++++++++|++
T Consensus 95 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~~~~~v~v 170 (549)
T 2r0c_A 95 DHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQRDDHVRA 170 (549)
T ss_dssp TSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEECSSCEEE
T ss_pred ccccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEEeCCEEEE
Confidence 32 1222 222322 2222210 0 112 122221 9999999999999999888
Q ss_pred EEccC---CceeEEEeecEEEecCCCChHHHHHh-hhcCCCCccceeeeeeeEEEeeCCCCCccccccccceeee-cCCC
Q psy9141 133 YRTED---NSETKITDNQLIIGADGAYSGVRKCL-MKQSMFNYSQTYIEHGYMELCIPPSEDNEVWLYKNRLLSS-VPEV 207 (379)
Q Consensus 133 ~~~~~---G~~~~~i~adlVV~AdG~~S~vr~~l-~~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~p~~~~~~-~p~~ 207 (379)
++. + |+..+ ++||+||+|||.+|.+|+++ ++.....+.+.++. ..+..+. ....+...+...+.+ .|+.
T Consensus 171 ~~~-~~~~G~~~~-i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~p~~ 244 (549)
T 2r0c_A 171 TIT-DLRTGATRA-VHARYLVACDGASSPTRKALGIDAPPRHRTQVFRN---ILFRAPE-LRSLLGERAALFFFLMLSSS 244 (549)
T ss_dssp EEE-ETTTCCEEE-EEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEE---EEEECTT-HHHHHGGGCCSEEEEEEETT
T ss_pred EEE-ECCCCCEEE-EEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEE---EEEECCc-hHHhcCCCCceEEEEECCCC
Confidence 876 4 75445 99999999999999999998 56555555544321 1121221 000000011112222 1221
Q ss_pred CeEEEEEecCCCceee--ecCCC--C-CCChhhhcccc-cccccccCCc-ccCCCccccCCCCCccccCCcEEEe-eecc
Q psy9141 208 RKRISLRAQSLKSLMN--FPRAD--Q-GGDKRDCLLHE-GTSRILVPNM-RLSNHLDRDQPCKPLLDFKNPIKIQ-SHAV 279 (379)
Q Consensus 208 ~~~~~~~~~~~~~~~~--~p~~~--~-~~~~~~~l~~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~liG-Ah~~ 279 (379)
..+.+.+...+..+. +|.+. . .++..+.+... +. .. ..+. ...........+..|. ..|+.++| |++.
T Consensus 245 -~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~~~~~~~~~~~~~a~~~~-~grv~L~GDAAH~ 320 (549)
T 2r0c_A 245 -LRFPLRALDGRGLYRLTVGVDDASKSTMDSFELVRRAVAF-DT-EIEVLSDSEWHLTHRVADSFS-AGRVFLTGDAAHT 320 (549)
T ss_dssp -EEEEEEESSSSSEEEEEEECSTTCCSCCCHHHHHHHHBCS-CC-CCEEEEEEEEEECCEECSCSE-ETTEEECGGGTEE
T ss_pred -cEEEEEEECCCcEEEEEecCCCCCCCHHHHHHHHHHHhCC-CC-ceeEEEEecchhHhhhHHhhc-CCcEEEEcccccc
Confidence 123334433222221 12211 1 11111111111 00 00 0000 0000011112233444 34899999 4444
Q ss_pred cCCCcchhhhhHHHHHHHHHHhhcc---------ccccccccch
Q psy9141 280 VNEFYKQESLIVASLCQEKIEKMFD---------NTSTYKSRHI 314 (379)
Q Consensus 280 ~~P~~GQG~n~gl~Da~~L~~~l~~---------~~~~~~~~~~ 314 (379)
++|+.|||+|+|++||.+|+++|.+ .+.+|++++.
T Consensus 321 ~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~ 364 (549)
T 2r0c_A 321 LSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERR 364 (549)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHH
T ss_pred CCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 5599999999999999999999864 4556887763
No 6
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.96 E-value=2.5e-29 Score=252.64 Aligned_cols=285 Identities=13% Similarity=0.065 Sum_probs=166.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
.+++||+||||||+||++|+.|+++|++|+||||.+.+... ++++ .++++++++|+++|+++++... .+....
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~--~l~~~~~~~l~~lGl~~~~~~~-~~~~~~ 81 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGE----SRGL--GFTARTMEVFDQRGILPRFGEV-ETSTQG 81 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCC----CCSE--EECHHHHHHHHTTTCGGGGCSC-CBCCEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CCcc--eECHHHHHHHHHCCCHHHHHhc-cccccc
Confidence 35689999999999999999999999999999999866533 5554 6899999999999999987654 222211
Q ss_pred EEEecCCcEEEe-------eCCCCCcH--------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCc-eeEEEeec
Q psy9141 84 MIHGQNGKLREI-------PYDPVHNQ--------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNS-ETKITDNQ 147 (379)
Q Consensus 84 ~~~~~~g~~~~~-------~~~~~~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~-~~~~i~ad 147 (379)
.+ .+..... ++.....+ +.+.+ .+++|+++++|++++++++++++++. +|+ ..+ ++||
T Consensus 82 ~~---~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~v~v~~~-~~~g~~~-~~a~ 155 (500)
T 2qa1_A 82 HF---GGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATG-LGADIRRGHEVLSLTDDGAGVTVEVR-GPEGKHT-LRAA 155 (500)
T ss_dssp EE---TTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHH-TTCEEEETCEEEEEEEETTEEEEEEE-ETTEEEE-EEES
T ss_pred cc---cceecccccCCCCCCceeecCHHHHHHHHHHHHHH-CCCEEECCcEEEEEEEcCCeEEEEEE-cCCCCEE-EEeC
Confidence 11 1111100 01011122 22233 48999999999999999999998887 553 234 9999
Q ss_pred EEEecCCCChHHHHHh-hhcCCCCccceeeeeeeEEEeeCCCCCccccccccceeee-cCCCCeEEEEEecCCCc--eee
Q psy9141 148 LIIGADGAYSGVRKCL-MKQSMFNYSQTYIEHGYMELCIPPSEDNEVWLYKNRLLSS-VPEVRKRISLRAQSLKS--LMN 223 (379)
Q Consensus 148 lVV~AdG~~S~vr~~l-~~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~p~~~~~~-~p~~~~~~~~~~~~~~~--~~~ 223 (379)
+||+|||.+|.+|+++ ++.+...+.+.++. ..+..+..+.. ...+ .|+ ..+.+.|...+. +..
T Consensus 156 ~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~--g~~~~~p~~~g~~~~~~ 222 (500)
T 2qa1_A 156 YLVGCDGGRSSVRKAAGFDFPGTAATMEMYL---ADIKGVELQPR--------MIGETLPG--GMVMVGPLPGGITRIIV 222 (500)
T ss_dssp EEEECCCTTCHHHHHTTCCCCEECCCCEEEE---EEEESCCCCCE--------EEEEEETT--EEEEEEEETTTEEEEEE
T ss_pred EEEECCCcchHHHHHcCCCcCCCccceEEEE---EEEEeCCCCCc--------eEEEECCC--cEEEEEEcCCCEEEEEE
Confidence 9999999999999998 55544444443321 12212110110 1111 122 223444443332 111
Q ss_pred e-cCCCC----CCChhhhcccc-----cccccccCCcc-cCCCccccCCCCCccccCCcEEEe-eecccCCCcchhhhhH
Q psy9141 224 F-PRADQ----GGDKRDCLLHE-----GTSRILVPNMR-LSNHLDRDQPCKPLLDFKNPIKIQ-SHAVVNEFYKQESLIV 291 (379)
Q Consensus 224 ~-p~~~~----~~~~~~~l~~~-----g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~liG-Ah~~~~P~~GQG~n~g 291 (379)
. +.+.. .....+.+... +. ........ ...+.........|. ..|++|+| |++.++|+.|||+|+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~-~grv~L~GDAAH~~~P~~GqG~n~g 300 (500)
T 2qa1_A 223 CERGTPPQRRETPPSWHEVADAWKRLTGD-DIAHAEPVWVSAFGNATRQVTEYR-RGRVILAGDSAHIHLPAGGQGMNTS 300 (500)
T ss_dssp EETTCCC-----CCCHHHHHHHHHHHHSC-CCTTSEEEEEEEEECCEEECSCSE-ETTEEECGGGTEECCCCSSCHHHHH
T ss_pred EcCCCCCccccCCCCHHHHHHHHHHhcCC-CCCccceeEEEEeccCcEEccccc-cCCEEEEEccccCCCCccccchhhh
Confidence 1 11110 00111111110 00 00000000 000011112234444 34899999 4444559999999999
Q ss_pred HHHHHHHHHhhcc---------ccccccccchhh
Q psy9141 292 ASLCQEKIEKMFD---------NTSTYKSRHINF 316 (379)
Q Consensus 292 l~Da~~L~~~l~~---------~~~~~~~~~~~~ 316 (379)
++|+.+|+++|.+ .+.+|++++...
T Consensus 301 i~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~ 334 (500)
T 2qa1_A 301 IQDAVNLGWKLGAVVNGTATEELLDSYHSERHAV 334 (500)
T ss_dssp HHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 9999999999865 344687776433
No 7
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.96 E-value=3.5e-29 Score=259.42 Aligned_cols=306 Identities=17% Similarity=0.158 Sum_probs=178.9
Q ss_pred CCcEEEECCChHHHHHHHHHHh-----CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAK-----NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~-----~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
++||+||||||+||++|+.|++ .|++|+||||.+.+... |+++ +++++++++|+++|+++++...+.++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~----gra~--~l~~~tle~l~~lGl~~~l~~~~~~~ 81 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYN----GQAD--GLQCRTLESLKNLGLADKILSEANDM 81 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCS----CSCC--EECHHHHHHHHTTTCHHHHHTTCBCC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCC----Ccee--EEChHHHHHHHHCCCHHHHHHhcccc
Confidence 5899999999999999999999 99999999999765433 6665 68999999999999999999888888
Q ss_pred eeeEEEecC--CcEE---EeeC---C--CC----CcH--------HHHhcCC--CCeEEeCceEEEEEecC--------C
Q psy9141 81 RARMIHGQN--GKLR---EIPY---D--PV----HNQ--------VELEQYP--DCNIYFQHKLINLDVNS--------G 128 (379)
Q Consensus 81 ~~~~~~~~~--g~~~---~~~~---~--~~----~~~--------~~~~~~~--gv~i~~~~~v~~i~~~~--------~ 128 (379)
..+.+++.+ +... .++. . .. .+| +.+.+.. +++|++++++++++.++ .
T Consensus 82 ~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~ 161 (665)
T 1pn0_A 82 STIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAY 161 (665)
T ss_dssp CEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCC
T ss_pred ceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCC
Confidence 888887754 2221 1111 0 00 122 2222222 48999999999998875 4
Q ss_pred eEEEEEc-----------------------------------------cCCceeEEEeecEEEecCCCChHHHHHh-hhc
Q psy9141 129 NVTFYRT-----------------------------------------EDNSETKITDNQLIIGADGAYSGVRKCL-MKQ 166 (379)
Q Consensus 129 ~v~v~~~-----------------------------------------~~G~~~~~i~adlVV~AdG~~S~vr~~l-~~~ 166 (379)
+|++++. .+|+..+ ++||+||+|||++|.+|+++ ++.
T Consensus 162 ~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~-i~A~~VVGADG~~S~VR~~lg~~~ 240 (665)
T 1pn0_A 162 PVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIET-VHCKYVIGCDGGHSWVRRTLGFEM 240 (665)
T ss_dssp CEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEE-EEEEEEEECCCTTCHHHHHHTCCC
T ss_pred CEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEE-EEeCEEEeccCCCCHHHHhcCCCC
Confidence 6777653 1454445 99999999999999999998 444
Q ss_pred CCCCccceeeeeeeEEEee-CCCCCccccccccceeeecCCCCeEEEEEecCCCce--e-eecCCC-------CCCChhh
Q psy9141 167 SMFNYSQTYIEHGYMELCI-PPSEDNEVWLYKNRLLSSVPEVRKRISLRAQSLKSL--M-NFPRAD-------QGGDKRD 235 (379)
Q Consensus 167 ~~~~~~~~~i~~~~~~~~~-p~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~--~-~~p~~~-------~~~~~~~ 235 (379)
.+..+... +.+..+.. ...+... .......... ..+.+.|...+.+ + .++... ......+
T Consensus 241 ~g~~~~~~---~~v~d~~~~~~~p~~~-----~~~~~~~~~~-g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e 311 (665)
T 1pn0_A 241 IGEQTDYI---WGVLDAVPASNFPDIR-----SRCAIHSAES-GSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPE 311 (665)
T ss_dssp EEEEEEEE---EEEEEEEEECCCTTTT-----SEEEEECSSS-CEEEEEECSTTCEEEEEEECC----------CCCCHH
T ss_pred CCCCccEE---EEEEEEEECCCCCCcc-----eEEEEEeCCC-ceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHH
Confidence 33333222 12222211 0000000 0001111111 2344444443311 1 112211 0001111
Q ss_pred hcccc-----cccccccCCcc-cCCCccccCCCCCccccCCcEEEe-eecccCCCcchhhhhHHHHHHHHHHhhcc----
Q psy9141 236 CLLHE-----GTSRILVPNMR-LSNHLDRDQPCKPLLDFKNPIKIQ-SHAVVNEFYKQESLIVASLCQEKIEKMFD---- 304 (379)
Q Consensus 236 ~l~~~-----g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~liG-Ah~~~~P~~GQG~n~gl~Da~~L~~~l~~---- 304 (379)
.+.+. +.+........ ...+......+..|....|++|+| |++.++|++|||||+||+|+.+|+++|..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g 391 (665)
T 1pn0_A 312 VVIANAKKIFHPYTFDVQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG 391 (665)
T ss_dssp HHHHHHHHHHTTSCCEEEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcccCceeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC
Confidence 11111 00000000000 000011112334454235899999 44445599999999999999999998864
Q ss_pred -----ccccccccc-------hhhhhheeeeEEee
Q psy9141 305 -----NTSTYKSRH-------INFIHRSYHLYTVD 327 (379)
Q Consensus 305 -----~~~~~~~~~-------~~~~~~~~~~~t~~ 327 (379)
.|.+|++++ +.+++.+.++|+..
T Consensus 392 ~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~ 426 (665)
T 1pn0_A 392 RAKRDILKTYEEERQPFAQALIDFDHQFSRLFSGR 426 (665)
T ss_dssp CBCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 455687775 44455555566543
No 8
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.96 E-value=2e-28 Score=239.04 Aligned_cols=152 Identities=23% Similarity=0.287 Sum_probs=118.4
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
|+ |+++||+||||||+|+++|+.|++.|++|+|+|+.+.... ..++++ .+++++.++|+++|+++ ...+.+.
T Consensus 1 M~-~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~---~~~~g~--~l~~~~~~~l~~~g~~~--~~~~~~~ 72 (397)
T 2vou_A 1 MS-PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLS---GFGTGI--VVQPELVHYLLEQGVEL--DSISVPS 72 (397)
T ss_dssp -C-CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCC---CCSCEE--ECCHHHHHHHHHTTCCG--GGTCBCC
T ss_pred CC-CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC---cccccc--ccChhHHHHHHHcCCcc--ccccccc
Confidence 55 5678999999999999999999999999999999876421 225554 68899999999999987 4456677
Q ss_pred eeeEEEec-CCcEE-EeeCCCCC-cH-----HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEec
Q psy9141 81 RARMIHGQ-NGKLR-EIPYDPVH-NQ-----VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGA 152 (379)
Q Consensus 81 ~~~~~~~~-~g~~~-~~~~~~~~-~~-----~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~A 152 (379)
....+++. ++... ..++.... .. ......++++|+++++|++++.+++++++++. +|++ ++||+||+|
T Consensus 73 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~g~~---~~ad~vV~A 148 (397)
T 2vou_A 73 SSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFS-DGTK---AEANWVIGA 148 (397)
T ss_dssp CEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEET-TSCE---EEESEEEEC
T ss_pred cceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEEC-CCCE---EECCEEEEC
Confidence 77777776 66542 22222111 11 11122368999999999999999999999998 8887 999999999
Q ss_pred CCCChHHHHHhh
Q psy9141 153 DGAYSGVRKCLM 164 (379)
Q Consensus 153 dG~~S~vr~~l~ 164 (379)
||.+|.+|+.+.
T Consensus 149 dG~~S~vr~~~~ 160 (397)
T 2vou_A 149 DGGASVVRKRLL 160 (397)
T ss_dssp CCTTCHHHHHHH
T ss_pred CCcchhHHHHhc
Confidence 999999999886
No 9
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.96 E-value=1e-28 Score=250.35 Aligned_cols=162 Identities=22% Similarity=0.275 Sum_probs=119.0
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
|+ +.++||+||||||+||++|+.|+++|++|+||||.+..... +++. .++++++++|+++|+++.+...+.+.
T Consensus 1 M~-~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~----~~~~--~l~~~~~~~l~~lGl~~~~~~~~~~~ 73 (535)
T 3ihg_A 1 MN-DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPY----PRAA--GQNPRTMELLRIGGVADEVVRADDIR 73 (535)
T ss_dssp CC-CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCC----CCSC--CBCHHHHHHHHHTTCHHHHHHSCCSS
T ss_pred CC-CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----Cccc--eECHHHHHHHHHcCCHHHHHhhCCCc
Confidence 55 34689999999999999999999999999999999876543 4544 68999999999999999998877655
Q ss_pred eee------EEEecCCcEEE-----e-----------eC-CCCCcH--------HHHhcCCCCeEEeCceEEEEEecCC-
Q psy9141 81 RAR------MIHGQNGKLRE-----I-----------PY-DPVHNQ--------VELEQYPDCNIYFQHKLINLDVNSG- 128 (379)
Q Consensus 81 ~~~------~~~~~~g~~~~-----~-----------~~-~~~~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~- 128 (379)
... ......+.... + +. .....+ +.+.+ .|++|+++++|++++.+++
T Consensus 74 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~ 152 (535)
T 3ihg_A 74 GTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARK-HGGAIRFGTRLLSFRQHDDD 152 (535)
T ss_dssp CTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEECGG
T ss_pred ccccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEECCCC
Confidence 432 22222232211 0 11 111122 23333 4899999999999999988
Q ss_pred ---eEEEEEccCCc-eeEEEeecEEEecCCCChHHHHHh-hhcCCCCcc
Q psy9141 129 ---NVTFYRTEDNS-ETKITDNQLIIGADGAYSGVRKCL-MKQSMFNYS 172 (379)
Q Consensus 129 ---~v~v~~~~~G~-~~~~i~adlVV~AdG~~S~vr~~l-~~~~~~~~~ 172 (379)
++++++. ++. ..+ ++||+||+|||.+|.+|+++ ++.....+.
T Consensus 153 ~~~~v~v~~~-~~~~~~~-i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~ 199 (535)
T 3ihg_A 153 AGAGVTARLA-GPDGEYD-LRAGYLVGADGNRSLVRESLGIGRYGHGTL 199 (535)
T ss_dssp GCSEEEEEEE-ETTEEEE-EEEEEEEECCCTTCHHHHHTTCCEEEEEEE
T ss_pred ccccEEEEEE-cCCCeEE-EEeCEEEECCCCcchHHHHcCCCcCCCCcc
Confidence 8988877 541 234 99999999999999999998 555444443
No 10
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.96 E-value=5.6e-28 Score=236.82 Aligned_cols=152 Identities=21% Similarity=0.268 Sum_probs=115.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCc-EEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCcee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYE-VNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~-V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~ 82 (379)
|+++||+||||||+||++|+.|++.|++ |+||||.+.+... ++++ .+++++.++|+++|+++.+...+.+...
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~----g~g~--~l~~~~~~~l~~lg~~~~l~~~~~~~~~ 75 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPL----GVGI--NIQPAAVEALAELGLGPALAATAIPTHE 75 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCC----SCEE--EECHHHHHHHHHTTCHHHHHHHSEEECE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccc----eeEE--EEChHHHHHHHHCCChHHHHhhCCCcce
Confidence 4578999999999999999999999999 9999998865432 5655 6889999999999999999877777777
Q ss_pred eEEEecCCcEE-Eee------CCCC---CcH--------HHHhcC-CCCeEEeCceEEEEEecCCeEEEEEccC---Cce
Q psy9141 83 RMIHGQNGKLR-EIP------YDPV---HNQ--------VELEQY-PDCNIYFQHKLINLDVNSGNVTFYRTED---NSE 140 (379)
Q Consensus 83 ~~~~~~~g~~~-~~~------~~~~---~~~--------~~~~~~-~gv~i~~~~~v~~i~~~~~~v~v~~~~~---G~~ 140 (379)
+.+++..|... ..+ +... ..+ ..+.+. ..++|+++++|++++. ++++++++. + |+.
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~-~~~~g~~ 153 (410)
T 3c96_A 76 LRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGA-RDGHGKP 153 (410)
T ss_dssp EEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEE-EETTSCE
T ss_pred EEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEe-cCCCCCc
Confidence 77776665532 111 1111 011 222221 2368999999999998 777888776 5 743
Q ss_pred eEEEeecEEEecCCCChHHHHHhh
Q psy9141 141 TKITDNQLIIGADGAYSGVRKCLM 164 (379)
Q Consensus 141 ~~~i~adlVV~AdG~~S~vr~~l~ 164 (379)
.+ ++||+||+|||.+|.+|+++.
T Consensus 154 ~~-~~ad~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 154 QA-LGADVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp EE-EEESEEEECCCTTCHHHHHHC
T ss_pred eE-EecCEEEECCCccchhHHHhc
Confidence 44 999999999999999999984
No 11
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.95 E-value=3.2e-28 Score=237.49 Aligned_cols=150 Identities=20% Similarity=0.294 Sum_probs=118.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
+.++||+||||||+|+++|+.|+++|++|+|+|+.+.... .++++ .+++++.++|+++|+++.+...+.+....
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~----~~~~~--~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERA----INGAD--LLKPAGIRVVEAAGLLAEVTRRGGRVRHE 77 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCCC--EECHHHHHHHHHTTCHHHHHHTTCEEECE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCc----cCcee--eECchHHHHHHHcCcHHHHHHhCCCccee
Confidence 3468999999999999999999999999999999876532 24444 68899999999999999998777777777
Q ss_pred EEEecCCcE-EEeeCCCC--------CcH--------HHHhcCCCCeEEeCceEEEEEecCCeE--EEEEccCCceeEEE
Q psy9141 84 MIHGQNGKL-REIPYDPV--------HNQ--------VELEQYPDCNIYFQHKLINLDVNSGNV--TFYRTEDNSETKIT 144 (379)
Q Consensus 84 ~~~~~~g~~-~~~~~~~~--------~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~~v--~v~~~~~G~~~~~i 144 (379)
.+++.++.. ..+++... ..+ +.+.+.++++++++++|++++.+++++ .+++. +|++ +
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~-~g~~---~ 153 (399)
T 2x3n_A 78 LEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLN-DGRV---L 153 (399)
T ss_dssp EEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEET-TSCE---E
T ss_pred EEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEEC-CCCE---E
Confidence 777766642 23333211 111 233333489999999999999988888 88888 8876 9
Q ss_pred eecEEEecCCCChHHHHHh
Q psy9141 145 DNQLIIGADGAYSGVRKCL 163 (379)
Q Consensus 145 ~adlVV~AdG~~S~vr~~l 163 (379)
+||+||+|||.+|.+|+.+
T Consensus 154 ~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 154 RPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp EEEEEEECCCTTCHHHHHT
T ss_pred ECCEEEECCCCChHHHHHh
Confidence 9999999999999999987
No 12
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.95 E-value=2.1e-27 Score=230.33 Aligned_cols=316 Identities=16% Similarity=0.094 Sum_probs=183.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
|+.+||+||||||+|+++|+.|++.|++|+|+|+.+.+... ++++ .+++++.++|+++|+++.+...+.+....
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~----~~~~--~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF----GAGI--YLWHNGLRVLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC----SSEE--EEEHHHHHHHHHTTCHHHHHTTCBCCSCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC----CceE--EeCccHHHHHHHcCCHHHHHhhCCCccce
Confidence 56789999999999999999999999999999998866432 5554 67899999999999999998888788777
Q ss_pred EEEecCCcEE-EeeC-CCC---CcH--------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEE
Q psy9141 84 MIHGQNGKLR-EIPY-DPV---HNQ--------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLII 150 (379)
Q Consensus 84 ~~~~~~g~~~-~~~~-~~~---~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV 150 (379)
.+++. |... ..++ ... ..+ +.+.+ .|++++++++|++++. + + ++++. +|++ ++||+||
T Consensus 83 ~~~~~-g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~-~-~-~v~~~-~g~~---~~ad~vV 153 (379)
T 3alj_A 83 ETWMH-NKSVSKETFNGLPWRIMTRSHLHDALVNRARA-LGVDISVNSEAVAADP-V-G-RLTLQ-TGEV---LEADLIV 153 (379)
T ss_dssp EEEET-TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHH-TTCEEESSCCEEEEET-T-T-EEEET-TSCE---EECSEEE
T ss_pred EEEeC-CceeeeccCCCCceEEECHHHHHHHHHHHHHh-cCCEEEeCCEEEEEEe-C-C-EEEEC-CCCE---EEcCEEE
Confidence 77776 5432 2222 111 011 22333 5899999999999987 3 3 77787 8876 9999999
Q ss_pred ecCCCChHHHHHhhhcCCCCccceeeeeeeEEEeeCCCCC-cccccccc-ceee--ecCCCCeEEEEEecCCCceee---
Q psy9141 151 GADGAYSGVRKCLMKQSMFNYSQTYIEHGYMELCIPPSED-NEVWLYKN-RLLS--SVPEVRKRISLRAQSLKSLMN--- 223 (379)
Q Consensus 151 ~AdG~~S~vr~~l~~~~~~~~~~~~i~~~~~~~~~p~~~~-~~~~~~p~-~~~~--~~p~~~~~~~~~~~~~~~~~~--- 223 (379)
+|||.+|.+|+++.......+ .....+....+.... .+.. .+. .... ++... ..+.+.|...+...+
T Consensus 154 ~AdG~~s~vr~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~ 227 (379)
T 3alj_A 154 GADGVGSKVRDSIGFKQDRWV----SKDGLIRLIVPRMKKELGHG-EWDNTIDMWNFWPRV-QRILYSPCNENELYLGLM 227 (379)
T ss_dssp ECCCTTCHHHHHHCCCEEEEE----EEEEEEEEEEECCHHHHCSS-CTTSEEEEECCSSSC-CEEEEEECSSSEEEEEEE
T ss_pred ECCCccHHHHHHhcCCCCcCc----CCcEEEEEEechhhccCCcC-CcccccccceEECCC-CEEEEEECCCCcEEEEEE
Confidence 999999999998843111111 111112222221000 0000 011 1111 12222 234455555443322
Q ss_pred ecCCC-CCCChhhhcccc-cccc---cccCCcccCC---C-ccccCCCCCccccCCcEEEe-eecccCCCcchhhhhHHH
Q psy9141 224 FPRAD-QGGDKRDCLLHE-GTSR---ILVPNMRLSN---H-LDRDQPCKPLLDFKNPIKIQ-SHAVVNEFYKQESLIVAS 293 (379)
Q Consensus 224 ~p~~~-~~~~~~~~l~~~-g~~~---~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~liG-Ah~~~~P~~GQG~n~gl~ 293 (379)
++.+. ...++.+.+... .... .+........ . .....++.+|. ..|++++| |++.++|++|||+|+|++
T Consensus 228 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~rv~lvGDAAh~~~P~~GqG~~~ai~ 306 (379)
T 3alj_A 228 APAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWT-RGKVALVGDAAHAMCPALAQGAGCAMV 306 (379)
T ss_dssp ECTTCTTTTCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSE-ETTEEECTHHHHCCCGGGSCHHHHHHH
T ss_pred ecCCCCCHHHHHHHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcc-cCcEEEEEcccCCCCcchhhhHHHHHH
Confidence 22211 011222222110 0000 0000000000 0 00112244555 35899999 544556999999999999
Q ss_pred HHHHHHHhhccc------cccccccchhhhhheeeeEEeeecccccchhhHHHHHHhhhhccCCCCh
Q psy9141 294 LCQEKIEKMFDN------TSTYKSRHINFIHRSYHLYTVDIGVHKVTESSILNLLLRGMKKNVPMPN 354 (379)
Q Consensus 294 Da~~L~~~l~~~------~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (379)
|+..|+++|.+. +..|++++........ +.+..+..++.++..-...+
T Consensus 307 da~~La~~L~~~~~~~~~l~~Y~~~r~~~~~~~~-------------~~s~~~~~~~~~~~~~~~~~ 360 (379)
T 3alj_A 307 NAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQ-------------ALSGDYAANRSLSKGNMFTP 360 (379)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHTGGGGSCCCCT
T ss_pred HHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH-------------HHhhhhhHHhhccCCCccch
Confidence 999999999642 3456655544443222 22345556666655444433
No 13
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.95 E-value=1.5e-27 Score=232.96 Aligned_cols=155 Identities=27% Similarity=0.424 Sum_probs=115.6
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCH-HHHHHHHHCCChHHHHhCCCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSV-RGREALRRIGLEDKLLAHGIP 79 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~-~~~~~l~~lGl~~~l~~~~~~ 79 (379)
|++|+++||+||||||+|+++|+.|++.|++|+||||.+.+... ..|..+ .+.+ .+.++|+++|+++.+...+.+
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~--~~g~~~--~~~~~~~~~~l~~~gl~~~~~~~~~~ 96 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR--IFGGTL--DLHKGSGQEAMKKAGLLQTYYDLALP 96 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC--CCSCCE--ECCTTTHHHHHHHTTCHHHHHHHCBC
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc--ccCCee--eeCCccHHHHHHhcChHHHHHHhhcc
Confidence 55567799999999999999999999999999999998765421 235544 3443 678999999999998876666
Q ss_pred ceeeEEEecCCcEEEe---e----CCCC-CcH-----HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEee
Q psy9141 80 MRARMIHGQNGKLREI---P----YDPV-HNQ-----VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDN 146 (379)
Q Consensus 80 ~~~~~~~~~~g~~~~~---~----~~~~-~~~-----~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~a 146 (379)
... .+++.+|..... + +... ..+ .......+++|+++++|++++.+++++++++. +|++ ++|
T Consensus 97 ~~~-~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~g~~---~~a 171 (398)
T 2xdo_A 97 MGV-NIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFE-NKPS---ETA 171 (398)
T ss_dssp CCE-EEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEET-TSCC---EEE
T ss_pred cce-EEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEEC-CCcE---Eec
Confidence 555 666655543211 1 0001 111 12233345789999999999998888999998 8876 999
Q ss_pred cEEEecCCCChHHHHHhh
Q psy9141 147 QLIIGADGAYSGVRKCLM 164 (379)
Q Consensus 147 dlVV~AdG~~S~vr~~l~ 164 (379)
|+||+|||.+|.+|+++.
T Consensus 172 d~vV~AdG~~S~vR~~l~ 189 (398)
T 2xdo_A 172 DLVILANGGMSKVRKFVT 189 (398)
T ss_dssp SEEEECSCTTCSCCTTTC
T ss_pred CEEEECCCcchhHHhhcc
Confidence 999999999999999873
No 14
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.95 E-value=2.4e-27 Score=244.87 Aligned_cols=159 Identities=19% Similarity=0.289 Sum_probs=117.6
Q ss_pred CCcEEEECCChHHHHHHHHHHh-CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAK-NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~-~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
++||+||||||+||++|+.|++ .|++|+||||.+.+... ++++ .++++++++|+++|+++++...+.+.....
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~----g~a~--~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~ 105 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMEL----GQAD--GIACRTMEMFEAFEFADSILKEACWINDVT 105 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSS----CSCC--EECHHHHHHHHHTTCHHHHHHHSEEECEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCC----Ccee--eeCHHHHHHHHHcCcHHHHHHhcccccceE
Confidence 5799999999999999999999 99999999999866543 5554 689999999999999999887777777677
Q ss_pred EEecC----CcEE---EeeC---C--CC----CcH--------HHHhcCC-CCeEEeCceEEEEEecCC----eEEEEEc
Q psy9141 85 IHGQN----GKLR---EIPY---D--PV----HNQ--------VELEQYP-DCNIYFQHKLINLDVNSG----NVTFYRT 135 (379)
Q Consensus 85 ~~~~~----g~~~---~~~~---~--~~----~~~--------~~~~~~~-gv~i~~~~~v~~i~~~~~----~v~v~~~ 135 (379)
++..+ +... ..+. . .. ..+ +.+.+.. +++|+++++|++++.+++ ++++++.
T Consensus 106 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~ 185 (639)
T 2dkh_A 106 FWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLE 185 (639)
T ss_dssp EEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEE
T ss_pred EECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEE
Confidence 76642 3321 1111 1 00 122 2333333 459999999999998763 5777765
Q ss_pred c-----CCceeEEEeecEEEecCCCChHHHHHh-hhcCCCCc
Q psy9141 136 E-----DNSETKITDNQLIIGADGAYSGVRKCL-MKQSMFNY 171 (379)
Q Consensus 136 ~-----~G~~~~~i~adlVV~AdG~~S~vr~~l-~~~~~~~~ 171 (379)
+ +|+..+ ++||+||+|||.+|.+|+++ +...+..+
T Consensus 186 ~~~~~~~G~~~~-i~a~~vVgADG~~S~vR~~lg~~~~g~~~ 226 (639)
T 2dkh_A 186 RCDAAHAGQIET-VQARYVVGCDGARSNVRRAIGRQLVGDSA 226 (639)
T ss_dssp ECSGGGTTCEEE-EEEEEEEECCCTTCHHHHHTTCCCEECSC
T ss_pred eccccCCCCeEE-EEeCEEEECCCcchHHHHHhCCCCCCCCc
Confidence 2 465445 99999999999999999998 44443333
No 15
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.95 E-value=3e-28 Score=237.10 Aligned_cols=150 Identities=19% Similarity=0.189 Sum_probs=111.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
++||+||||||+|+++|+.|++.|++|+|+|+.+.+...... +.+ .+++++.++|+++|+++.+...+.+.....+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~-~~g---~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 77 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRI-RAG---VLEQGMVDLLREAGVDRRMARDGLVHEGVEI 77 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCC-CCC---EECHHHHHHHHHTTCCHHHHHHCEEESCEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCC-ceE---eECHHHHHHHHHcCCcHHHHhcCCccceEEE
Confidence 379999999999999999999999999999998742100000 222 4789999999999999998877767666666
Q ss_pred EecCCcEEEeeC-----CCC---CcH--------HHHhcCCCCeEEeCceEEEEEecC-CeEEEEE-ccCCceeEEEeec
Q psy9141 86 HGQNGKLREIPY-----DPV---HNQ--------VELEQYPDCNIYFQHKLINLDVNS-GNVTFYR-TEDNSETKITDNQ 147 (379)
Q Consensus 86 ~~~~g~~~~~~~-----~~~---~~~--------~~~~~~~gv~i~~~~~v~~i~~~~-~~v~v~~-~~~G~~~~~i~ad 147 (379)
+... ....+++ ... ..+ ..+.+ .+++++++++|++++.++ +++.+++ . +|++.+ ++||
T Consensus 78 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~g~~i~~~~~v~~i~~~~~~~~~v~~~~-~g~~~~-~~a~ 153 (394)
T 1k0i_A 78 AFAG-QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREA-CGATTVYQAAEVRLHDLQGERPYVTFER-DGERLR-LDCD 153 (394)
T ss_dssp EETT-EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHH-TTCEEESSCEEEEEECTTSSSCEEEEEE-TTEEEE-EECS
T ss_pred EECC-ceEEeccccccCCCceEEechHHHHHHHHHHHHh-cCCeEEeceeEEEEEEecCCceEEEEec-CCcEEE-EEeC
Confidence 6543 2222222 100 011 22223 489999999999998864 5677777 6 887444 9999
Q ss_pred EEEecCCCChHHHHHh
Q psy9141 148 LIIGADGAYSGVRKCL 163 (379)
Q Consensus 148 lVV~AdG~~S~vr~~l 163 (379)
+||+|||.+|.+|+++
T Consensus 154 ~vV~AdG~~S~vr~~l 169 (394)
T 1k0i_A 154 YIAGCDGFHGISRQSI 169 (394)
T ss_dssp EEEECCCTTCSTGGGS
T ss_pred EEEECCCCCcHHHHhc
Confidence 9999999999999987
No 16
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.94 E-value=2.9e-26 Score=221.82 Aligned_cols=162 Identities=19% Similarity=0.232 Sum_probs=107.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
|++|||+||||||+||++|+.|+++|++|+||||.+.+... ..+|.+ +++ .+++.+|+..........+.+.
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~-~~~g~~----l~~---~~l~~l~~~~~~~~~~~~~~~~ 73 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP-VRCGEG----LSK---GILNEADIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS-CCSCCE----EET---HHHHHTTCCCCTTTEEEEESEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC-Cceecc----cCH---HHHHHcCCCchhhhhhcccceE
Confidence 56799999999999999999999999999999998766432 223433 344 4577777654322223344556
Q ss_pred EEEecCCcE-EEeeCCCC-------CcH-------HHHhcCCCCeEEeCceEEEEEecCCeEEE-EEccCCceeEEEeec
Q psy9141 84 MIHGQNGKL-REIPYDPV-------HNQ-------VELEQYPDCNIYFQHKLINLDVNSGNVTF-YRTEDNSETKITDNQ 147 (379)
Q Consensus 84 ~~~~~~g~~-~~~~~~~~-------~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v-~~~~~G~~~~~i~ad 147 (379)
.++..++.. ........ ..+ ...+...|++++++++|+++..+++.+.. ....+|+..+ ++||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~-~~a~ 152 (397)
T 3oz2_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVD-VRAK 152 (397)
T ss_dssp EEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEE-EEEE
T ss_pred EEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceE-EEEe
Confidence 666554432 11111110 111 22233469999999999999988887653 2222566556 9999
Q ss_pred EEEecCCCChHHHHHh-hhcCCCCccce
Q psy9141 148 LIIGADGAYSGVRKCL-MKQSMFNYSQT 174 (379)
Q Consensus 148 lVV~AdG~~S~vr~~l-~~~~~~~~~~~ 174 (379)
+||+|||.+|.+|+++ .......+...
T Consensus 153 ~vIgAdG~~S~vr~~~g~~~~~~~~~~~ 180 (397)
T 3oz2_A 153 MVIAADGFESEFGRWAGLKSVILARNDI 180 (397)
T ss_dssp EEEECCCTTCHHHHHHTCGGGCCCGGGE
T ss_pred EEEeCCccccHHHHHcCCCcccccceee
Confidence 9999999999999998 44443444433
No 17
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.93 E-value=6.2e-25 Score=215.31 Aligned_cols=163 Identities=16% Similarity=0.274 Sum_probs=114.7
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
|+ +.++||+||||||+|+++|+.|++.|++|+|+|+.+.+... .|. .+.+.+.+.++.+|+++.+...+.+.
T Consensus 1 M~-~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~---~g~----~~~~~~~~~l~~~g~~~~~~~~~~~~ 72 (421)
T 3nix_A 1 MQ-REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFV---IGE----SLLPRCMEHLDEAGFLDAVKAQGFQQ 72 (421)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCC---SCC----BCCGGGHHHHHHTTCHHHHHHTTCEE
T ss_pred CC-CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCc---ccC----cccHhHHHHHHHcCChHHHHHcCCcc
Confidence 54 34589999999999999999999999999999999755421 132 57899999999999999988776544
Q ss_pred e-eeEEEecCCcEEEeeCCCCC----------cH-------HHHhcCCCCeEEeCceEEEEEecCCeE--EEEEccCCce
Q psy9141 81 R-ARMIHGQNGKLREIPYDPVH----------NQ-------VELEQYPDCNIYFQHKLINLDVNSGNV--TFYRTEDNSE 140 (379)
Q Consensus 81 ~-~~~~~~~~g~~~~~~~~~~~----------~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v--~v~~~~~G~~ 140 (379)
. +..+.. .+....+++.... .+ ....+..|++++++++|++++.+++++ .+.+. +|+.
T Consensus 73 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~-~g~~ 150 (421)
T 3nix_A 73 KFGAKFVR-GKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDI-NGNK 150 (421)
T ss_dssp ECEEEEEE-TTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEET-TSCE
T ss_pred cCCcEEEe-CCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcC-CCCE
Confidence 3 333332 2333333332110 11 122223489999999999999887765 45556 8885
Q ss_pred eEEEeecEEEecCCCChHHHHHh-hhcCCCCccce
Q psy9141 141 TKITDNQLIIGADGAYSGVRKCL-MKQSMFNYSQT 174 (379)
Q Consensus 141 ~~~i~adlVV~AdG~~S~vr~~l-~~~~~~~~~~~ 174 (379)
.+ ++||+||+|||.+|.+|+.+ ...+...+...
T Consensus 151 ~~-~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~ 184 (421)
T 3nix_A 151 RE-IEARFIIDASGYGRVIPRMFGLDKPSGFESRR 184 (421)
T ss_dssp EE-EEEEEEEECCGGGCHHHHHTTCEECCSSCCCE
T ss_pred EE-EEcCEEEECCCCchhhHHhcCCCCCCcCCCcE
Confidence 55 99999999999999999887 44443333333
No 18
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.92 E-value=8.2e-24 Score=205.34 Aligned_cols=151 Identities=19% Similarity=0.225 Sum_probs=104.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
|+++||+||||||+|+++|+.|+++|++|+|+|+.+.+.... ..+.. + +.+.++.+|+++.......+....
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~-~~~~~----~---~~~~~~~lg~~~~~~~~~~~~~~~ 73 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV-RCGEG----L---SKGILNEADIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC-CSCCE----E---ETHHHHHTTCCCCTTTEEEEESEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc-ccccc----c---CHHHHHHcCCCCChHHhhhhcceE
Confidence 456899999999999999999999999999999998654321 12221 2 236788999876533233455566
Q ss_pred EEEecCCcE-EEeeCCC---C----CcH-------HHHhcCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeec
Q psy9141 84 MIHGQNGKL-REIPYDP---V----HNQ-------VELEQYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQ 147 (379)
Q Consensus 84 ~~~~~~g~~-~~~~~~~---~----~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~ad 147 (379)
.+++..+.. ..++... . ..+ ....+..|++++++++|++++.+++.++ +++..+++..+ ++||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~-~~a~ 152 (397)
T 3cgv_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVD-VRAK 152 (397)
T ss_dssp EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEE-EEEE
T ss_pred EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEE-EEcC
Confidence 676666543 3332221 1 011 1222236999999999999999888876 66631233334 9999
Q ss_pred EEEecCCCChHHHHHh
Q psy9141 148 LIIGADGAYSGVRKCL 163 (379)
Q Consensus 148 lVV~AdG~~S~vr~~l 163 (379)
+||+|||.+|.+|+++
T Consensus 153 ~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 153 MVIAADGFESEFGRWA 168 (397)
T ss_dssp EEEECCCTTCHHHHHH
T ss_pred EEEECCCcchHhHHhc
Confidence 9999999999999988
No 19
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.91 E-value=1.4e-23 Score=211.48 Aligned_cols=151 Identities=17% Similarity=0.245 Sum_probs=106.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHH-HHHHCCChHHHHhCCCCcee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGRE-ALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~-~l~~lGl~~~l~~~~~~~~~ 82 (379)
+.++||+||||||+|+++|+.|++.|++|+|||+.+.+... .|. .+.+.... +++.+|+++.+...+.+...
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~---~g~----~~~~~~~~~~l~~lgl~~~~~~~~~~~~~ 77 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQ---IGE----SLLPATVHGICAMLGLTDEMKRAGFPIKR 77 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCC---SCC----BCCHHHHTTHHHHTTCHHHHHTTTCCEEC
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCC---CCc----ccCcchHHHHHHHhCcHHHHHHcCCcccc
Confidence 44689999999999999999999999999999999754321 122 35676554 89999999998877655544
Q ss_pred eEEEecCCc--EEEeeCCCC----------CcH-------HHHhcCCCCeEEeCceEEEEEecCCeE---EEEEccCCce
Q psy9141 83 RMIHGQNGK--LREIPYDPV----------HNQ-------VELEQYPDCNIYFQHKLINLDVNSGNV---TFYRTEDNSE 140 (379)
Q Consensus 83 ~~~~~~~g~--~~~~~~~~~----------~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v---~v~~~~~G~~ 140 (379)
...+..... .....+... ..+ .......|++++++++|++++.+++.+ ++... +|+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~-dG~~ 156 (512)
T 3e1t_A 78 GGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNT-EGVE 156 (512)
T ss_dssp EEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECS-SSCE
T ss_pred CceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeC-CCCE
Confidence 333222211 111111110 111 122233799999999999999988854 44455 6864
Q ss_pred eEEEeecEEEecCCCChHHHHHh
Q psy9141 141 TKITDNQLIIGADGAYSGVRKCL 163 (379)
Q Consensus 141 ~~~i~adlVV~AdG~~S~vr~~l 163 (379)
.+ ++||+||+|||.+|.+|+++
T Consensus 157 ~~-i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 157 LM-AHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp EE-EEEEEEEECCCTTCSSGGGT
T ss_pred EE-EEcCEEEECCCcchHHHHHc
Confidence 45 99999999999999999998
No 20
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.91 E-value=1e-24 Score=222.75 Aligned_cols=152 Identities=17% Similarity=0.256 Sum_probs=108.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCce-e
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMR-A 82 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~-~ 82 (379)
|+++||+||||||+|+++|+.|++.|++|+|||+.+.+.. +.+. ++.+.+.++++.+|+++.+...+.... .
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~-----~~G~--~l~p~~~~~l~~lGl~~~l~~~~~~~~~~ 93 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY-----RVGE--SLLPGTMSILNRLGLQEKIDAQNYVKKPS 93 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC-----CCCC--BCCHHHHHHHHHTTCHHHHHHHCCEEECE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC-----ceee--eECHHHHHHHHHcCCcHHHHhcCCcccCC
Confidence 6789999999999999999999999999999999975542 2222 578999999999999998876644332 2
Q ss_pred eEEEe-cCCcEEEeeCCC--------C----CcH-------HHHhcCCCCeEEeCceEEEEEec-CCeEEEEEccCCcee
Q psy9141 83 RMIHG-QNGKLREIPYDP--------V----HNQ-------VELEQYPDCNIYFQHKLINLDVN-SGNVTFYRTEDNSET 141 (379)
Q Consensus 83 ~~~~~-~~g~~~~~~~~~--------~----~~~-------~~~~~~~gv~i~~~~~v~~i~~~-~~~v~v~~~~~G~~~ 141 (379)
..+.. .........+.. . ..+ ....+..|++++++++|++++.+ ++.+.+++..+|+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~ 173 (591)
T 3i3l_A 94 ATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESV 173 (591)
T ss_dssp EEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEE
T ss_pred cEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceE
Confidence 22221 111111111111 0 011 12233379999999999999876 556777765356434
Q ss_pred EEEeecEEEecCCCChHHHHHh
Q psy9141 142 KITDNQLIIGADGAYSGVRKCL 163 (379)
Q Consensus 142 ~~i~adlVV~AdG~~S~vr~~l 163 (379)
+ ++||+||+|||.+|.+|+.+
T Consensus 174 ~-i~AdlVV~AdG~~S~lr~~l 194 (591)
T 3i3l_A 174 T-VESDFVIDAGGSGGPISRKL 194 (591)
T ss_dssp E-EEESEEEECCGGGCHHHHHH
T ss_pred E-EEcCEEEECCCCcchhHHHc
Confidence 4 99999999999999999987
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.90 E-value=2.3e-23 Score=206.73 Aligned_cols=150 Identities=16% Similarity=0.181 Sum_probs=100.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHh-CCCCceeeE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLA-HGIPMRARM 84 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~-~~~~~~~~~ 84 (379)
++||+||||||+|+++|+.|+++|++|+|+|+.+.+.......|.. + +.+.++.+|++..... ......+..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~----l---~~~~l~~lg~~~~~~~~~~~~~~~~~ 78 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDA----V---SKAHFDKLGMPYPKGEELENKINGIK 78 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCE----E---EHHHHHHTTCCCCCGGGEEEEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccccc----c---cHHHHHHhcCCCCchHHHHhhhcceE
Confidence 5899999999999999999999999999999987643211222332 2 4678888887653221 122333444
Q ss_pred EEecCCcE-EEee-CCCCCcH-------HHHhcCCCCeEEeCceEEEEEecCCeEE-EEEcc--CCceeEEEeecEEEec
Q psy9141 85 IHGQNGKL-REIP-YDPVHNQ-------VELEQYPDCNIYFQHKLINLDVNSGNVT-FYRTE--DNSETKITDNQLIIGA 152 (379)
Q Consensus 85 ~~~~~g~~-~~~~-~~~~~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~--~G~~~~~i~adlVV~A 152 (379)
++..++.. ...+ ......+ .......|++++++++|++++.++++++ +++.. +|+..+ ++||+||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~-~~ad~VV~A 157 (453)
T 3atr_A 79 LYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELT-VYSKVVVEA 157 (453)
T ss_dssp EECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEE-EECSEEEEC
T ss_pred EECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEE-EEcCEEEEC
Confidence 55444321 1111 0111111 1222236899999999999998888765 55432 465445 999999999
Q ss_pred CCCChHHHHHh
Q psy9141 153 DGAYSGVRKCL 163 (379)
Q Consensus 153 dG~~S~vr~~l 163 (379)
||.+|.+|+.+
T Consensus 158 dG~~s~vr~~l 168 (453)
T 3atr_A 158 TGYSRSFRSKL 168 (453)
T ss_dssp CGGGCTTGGGS
T ss_pred cCCchhhHHhc
Confidence 99999999987
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.87 E-value=5.5e-22 Score=200.47 Aligned_cols=151 Identities=19% Similarity=0.210 Sum_probs=101.4
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHh------------CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAK------------NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIG 68 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~------------~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lG 68 (379)
|+++..+||+||||||+|+++|+.|++ .|++|+|||+.+.+.. +.+. ++.+++.++|+.+|
T Consensus 2 mm~~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~-----g~g~--~~~p~~~~~l~~lG 74 (526)
T 2pyx_A 2 MMQKPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATI-----GVGE--GTWPSMRSTLSKIG 74 (526)
T ss_dssp GGGSCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCC-----CSCE--ECCTHHHHHHHHHT
T ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCc-----ceee--echHhHHHHHHHcC
Confidence 443457899999999999999999999 9999999998764432 2222 57899999999999
Q ss_pred ChHH--HHhCCCC-ceeeEEEecC-------CcEEEeeC-----------------------------------------
Q psy9141 69 LEDK--LLAHGIP-MRARMIHGQN-------GKLREIPY----------------------------------------- 97 (379)
Q Consensus 69 l~~~--l~~~~~~-~~~~~~~~~~-------g~~~~~~~----------------------------------------- 97 (379)
+++. +...+.. ..++.+.+.. +.....++
T Consensus 75 i~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~ 154 (526)
T 2pyx_A 75 IDENDFIRQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAP 154 (526)
T ss_dssp CCHHHHHHHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCS
T ss_pred CCHHHHHHHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccch
Confidence 9986 5554322 2222222110 00000000
Q ss_pred --------CCC------CcH--------HHHhcCCCCeEEeCceEEEEEecCCe--EEEEEccCCceeEEEeecEEEecC
Q psy9141 98 --------DPV------HNQ--------VELEQYPDCNIYFQHKLINLDVNSGN--VTFYRTEDNSETKITDNQLIIGAD 153 (379)
Q Consensus 98 --------~~~------~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~~--v~v~~~~~G~~~~~i~adlVV~Ad 153 (379)
... ..+ ..+.+..|++++++ +|++++.++++ +.+++. +|++ ++||+||+||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~-~g~~---i~ad~vV~Ad 229 (526)
T 2pyx_A 155 KSIVTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITK-QNGE---ISGQLFIDCT 229 (526)
T ss_dssp SCTTSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEES-SSCE---EECSEEEECS
T ss_pred hhhhccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEEC-CCCE---EEcCEEEECC
Confidence 000 011 12222269999999 69999887554 457777 7776 9999999999
Q ss_pred CCChHHH-HHh
Q psy9141 154 GAYSGVR-KCL 163 (379)
Q Consensus 154 G~~S~vr-~~l 163 (379)
|.+|.++ +.+
T Consensus 230 G~~S~~~~~~l 240 (526)
T 2pyx_A 230 GAKSLLLGEHL 240 (526)
T ss_dssp GGGCCCCCCCT
T ss_pred CcchHHHHHHh
Confidence 9999994 444
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.86 E-value=1.7e-23 Score=203.00 Aligned_cols=273 Identities=9% Similarity=0.015 Sum_probs=142.4
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCCh-HH-HHhCCCCceee
Q psy9141 8 SVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLE-DK-LLAHGIPMRAR 83 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~-~~-l~~~~~~~~~~ 83 (379)
||+||||||+|+++|+.|++. |++|+|+||.+.+... |+++ .+++++.+.+...+++ +. +.....+....
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~----g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVL----GWGV--VLPGRPGQHPANPLSYLDAPERLNPQFLEDF 75 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCC----CSEE--EEESCTTTCTTCGGGGSSCGGGGCCEEECCE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcc----eeEE--EeCcHHHHhhcCcchhhhhhHHHhhccccce
Confidence 899999999999999999999 9999999999866432 5555 3555555422222344 33 44344444455
Q ss_pred EEEecCCcEEEeeCCCC---CcH--------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEec
Q psy9141 84 MIHGQNGKLREIPYDPV---HNQ--------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGA 152 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~---~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~A 152 (379)
.++. .|......++.. ..+ +.+.+ .|++++++++|++++.. ++ ++||+||+|
T Consensus 76 ~~~~-~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~~------------~~---~~ad~vV~A 138 (381)
T 3c4a_A 76 KLVH-HNEPSLMSTGVLLCGVERRGLVHALRDKCRS-QGIAIRFESPLLEHGEL------------PL---ADYDLVVLA 138 (381)
T ss_dssp EEEE-SSSEEECCCCSCEEEEEHHHHHHHHHHHHHH-TTCEEETTCCCCSGGGC------------CG---GGCSEEEEC
T ss_pred EEEe-CCeeEEecCCCceeeecHHHHHHHHHHHHHH-CCCEEEeCCEeccchhc------------cc---ccCCEEEEC
Confidence 5555 343222111111 111 22233 48999999999887531 12 789999999
Q ss_pred CCCChHHHHHhhhcCCCCccceeeeeeeEEEeeCCCCCccccccccceeeecCCCCeEEEEEecCCCcee-eec--C---
Q psy9141 153 DGAYSGVRKCLMKQSMFNYSQTYIEHGYMELCIPPSEDNEVWLYKNRLLSSVPEVRKRISLRAQSLKSLM-NFP--R--- 226 (379)
Q Consensus 153 dG~~S~vr~~l~~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~-~~p--~--- 226 (379)
||.+|. |+.+....+..+........+... .+..+..+..+ . ..+..+..+.++|...+... .+. .
T Consensus 139 dG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~-~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~ 210 (381)
T 3c4a_A 139 NGVNHK-TAHFTEALVPQVDYGRNKYIWYGT-SQLFDQMNLVF-----R-THGKDIFIAHAYKYSDTMSTFIVECSEETY 210 (381)
T ss_dssp CGGGGG-TCCSSGGGCCCCEEEEEEEEEEEE-SSCCSSEEEEE-----E-EETTEEEEEEEEECSSSCEEEEEEECHHHH
T ss_pred CCCCch-HHhhhhhcCCCcccCCccEEEEec-CCCCCcceeeE-----e-eCCCcEEEEEEEEecCCeEEEEEECCcccc
Confidence 999999 988733222222211111111111 11100001100 0 01111111123443323221 111 0
Q ss_pred --CCCCC----Chhhh----cccc-cccccccCCcccCCCccccCCCCCccccCCcEEEe-eecccCCCcchhhhhHHHH
Q psy9141 227 --ADQGG----DKRDC----LLHE-GTSRILVPNMRLSNHLDRDQPCKPLLDFKNPIKIQ-SHAVVNEFYKQESLIVASL 294 (379)
Q Consensus 227 --~~~~~----~~~~~----l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG-Ah~~~~P~~GQG~n~gl~D 294 (379)
..+.. +..+. +... +...+ ..............++..|. ..|++++| |++.+||+.|||+|+||+|
T Consensus 211 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~-~grv~LvGDAAh~~~P~~GqG~~~al~D 288 (381)
T 3c4a_A 211 ARARLGEMSEEASAEYVAKVFQAELGGHGL-VSQPGLGWRNFMTLSHDRCH-DGKLVLLGDALQSGHFSIGHGTTMAVVV 288 (381)
T ss_dssp HHTTSSSSCHHHHHHHHHHHTHHHHTTCCC-BCCTTTCSEEEEECCCSCSE-ETTEEECGGGTCCCCGGGCCHHHHHHHH
T ss_pred ccCCcccCChHHHHHHHHHHhcccCCCchh-hcCCCcceeeeccccCCCcc-cCCEEEEEccccccCCCccccHHHHHHH
Confidence 11100 11111 1111 01111 11100000011123455666 35899999 4444569999999999999
Q ss_pred HHHHHHhhcc------ccccccccc
Q psy9141 295 CQEKIEKMFD------NTSTYKSRH 313 (379)
Q Consensus 295 a~~L~~~l~~------~~~~~~~~~ 313 (379)
|..|+++|.+ .+.+|++++
T Consensus 289 a~~La~~L~~~~~~~~aL~~Y~~~r 313 (381)
T 3c4a_A 289 AQLLVKALCTEDGVPAALKRFEERA 313 (381)
T ss_dssp HHHHHHHHHHSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccHHHHHHHHHHHH
Confidence 9999999864 345677665
No 24
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.86 E-value=2.7e-21 Score=196.40 Aligned_cols=147 Identities=12% Similarity=0.095 Sum_probs=99.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHh---CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHH-HHHHCCChHH--HHhCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAK---NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGRE-ALRRIGLEDK--LLAHGI 78 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~---~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~-~l~~lGl~~~--l~~~~~ 78 (379)
+.+||+|||||++|+++|+.|++ .|++|+|||+.+.+.. +.+. ++.+.+.+ +++.+|+++. +.....
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~-----~~g~--~~~p~~~~~~l~~lGi~~~~~~~~~~~ 96 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTL-----GVGE--ATIPNLQTAFFDFLGIPEDEWMRECNA 96 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCC-----CCCE--ECCTHHHHHTHHHHTCCHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCcc-----ceee--eechhHHHHHHHHhCCChHHHHHhcCC
Confidence 46899999999999999999999 9999999999764432 2222 56788899 9999999876 554332
Q ss_pred Cc-eeeEEEecCC---------------cEEEeeCC--------------------------------------------
Q psy9141 79 PM-RARMIHGQNG---------------KLREIPYD-------------------------------------------- 98 (379)
Q Consensus 79 ~~-~~~~~~~~~g---------------~~~~~~~~-------------------------------------------- 98 (379)
.. .+..+..... .....+++
T Consensus 97 ~~~~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 176 (550)
T 2e4g_A 97 SYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSP 176 (550)
T ss_dssp EEECEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCS
T ss_pred eEEEeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhh
Confidence 22 1222211110 00000110
Q ss_pred --------CC----CcH--------HHHhcCCCCeEEeCceEEEEEecCCe--EEEEEccCCceeEEEeecEEEecCCCC
Q psy9141 99 --------PV----HNQ--------VELEQYPDCNIYFQHKLINLDVNSGN--VTFYRTEDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 99 --------~~----~~~--------~~~~~~~gv~i~~~~~v~~i~~~~~~--v~v~~~~~G~~~~~i~adlVV~AdG~~ 156 (379)
.. ..+ ..+.+.+|++++++ +|++++.++++ +.+++. +|++ ++||+||+|||.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~-~G~~---i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 177 RRLDGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTA-TGRV---FDADLFVDCSGFR 251 (550)
T ss_dssp BCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEET-TSCE---EECSEEEECCGGG
T ss_pred HhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEEC-CCCE---EECCEEEECCCCc
Confidence 01 011 22233349999999 99999886554 567787 8876 9999999999999
Q ss_pred hHHHHHh
Q psy9141 157 SGVRKCL 163 (379)
Q Consensus 157 S~vr~~l 163 (379)
|.+++..
T Consensus 252 S~~~~~~ 258 (550)
T 2e4g_A 252 GLLINKA 258 (550)
T ss_dssp CCCCCCC
T ss_pred hhhHHHH
Confidence 9985444
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.84 E-value=1.2e-20 Score=191.05 Aligned_cols=151 Identities=16% Similarity=0.218 Sum_probs=98.8
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHh---CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHH-HHHHCCChHH--HH
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAK---NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGRE-ALRRIGLEDK--LL 74 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~---~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~-~l~~lGl~~~--l~ 74 (379)
|+ |+.+||+|||||++|+++|+.|++ .|++|+|||+.+.+... .|. ++.+.+.. +++.+|+.+. +.
T Consensus 1 M~-~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~---~g~----~~~~~~~~~~l~~lG~~~~~~~~ 72 (538)
T 2aqj_A 1 MN-KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIG---VGE----ATIPSLQKVFFDFLGIPEREWMP 72 (538)
T ss_dssp -C-CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCC---SCE----ECCTHHHHHTHHHHTCCHHHHGG
T ss_pred CC-CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcC---CCc----ccchhHHHHHHHHhCCCHHHHHH
Confidence 53 456899999999999999999999 99999999997644321 132 46788888 9999998765 33
Q ss_pred hCCCCce-eeEEE---------------ecCCcEE---------------------E-----------------------
Q psy9141 75 AHGIPMR-ARMIH---------------GQNGKLR---------------------E----------------------- 94 (379)
Q Consensus 75 ~~~~~~~-~~~~~---------------~~~g~~~---------------------~----------------------- 94 (379)
....... +..+. ...|... .
T Consensus 73 ~~~~~~~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 152 (538)
T 2aqj_A 73 QVNGAFKAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDG 152 (538)
T ss_dssp GGTCEEECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTC
T ss_pred hcCchhhCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcC
Confidence 2222221 11111 1111000 0
Q ss_pred ---eeCCCCCcH-------HHHhcCCCCeEEeCceEEEEEecCCe--EEEEEccCCceeEEEeecEEEecCCCChHHHHH
Q psy9141 95 ---IPYDPVHNQ-------VELEQYPDCNIYFQHKLINLDVNSGN--VTFYRTEDNSETKITDNQLIIGADGAYSGVRKC 162 (379)
Q Consensus 95 ---~~~~~~~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~--v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr~~ 162 (379)
.++.....+ .......|++++++ +|++++.++++ +.+++. +|++ ++||+||+|||.+|.+|+.
T Consensus 153 ~~~~~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~-~g~~---i~ad~vV~A~G~~s~~~~~ 227 (538)
T 2aqj_A 153 TRQMSHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTK-EGRT---LEADLFIDCSGMRGLLINQ 227 (538)
T ss_dssp CBCSCCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEET-TSCE---ECCSEEEECCGGGCCCCCC
T ss_pred CcCCCccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEEC-CCcE---EEeCEEEECCCCchhhHHH
Confidence 000000011 12222368999999 89999886553 567777 8876 9999999999999999765
Q ss_pred hh
Q psy9141 163 LM 164 (379)
Q Consensus 163 l~ 164 (379)
+.
T Consensus 228 ~l 229 (538)
T 2aqj_A 228 AL 229 (538)
T ss_dssp CT
T ss_pred Hh
Confidence 53
No 26
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.83 E-value=6.9e-19 Score=179.76 Aligned_cols=147 Identities=20% Similarity=0.211 Sum_probs=94.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhC------CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN------QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIP 79 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~------G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~ 79 (379)
++||+||||||+|+++|+.|++. |++|+||||.+.+... ...|. .+.+++++.| +.-|.. .+.+
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~-~~~g~----~l~~~~l~~l--l~~~~~---~g~~ 104 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH-TLSGA----CLDPRAFEEL--FPDWKE---KGAP 104 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT-CCCCC----EECTHHHHHH--CTTHHH---HTCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc-ccccc----ccCHHHHHHH--HHHHHh---cCCc
Confidence 48999999999999999999999 9999999999766432 11232 3677777665 333432 2333
Q ss_pred ce------eeEEEecCCcEEEeeC-CC--C-------CcH-------HHHhcCCCCeEEeCceEEEEEecCC-eEE-EEE
Q psy9141 80 MR------ARMIHGQNGKLREIPY-DP--V-------HNQ-------VELEQYPDCNIYFQHKLINLDVNSG-NVT-FYR 134 (379)
Q Consensus 80 ~~------~~~~~~~~g~~~~~~~-~~--~-------~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~-~v~-v~~ 134 (379)
+. ...+....+. ..+++ .. . ..+ ....+..|++|+++++|+++..+++ .+. |++
T Consensus 105 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~ 183 (584)
T 2gmh_A 105 LNTPVTEDRFGILTEKYR-IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIAT 183 (584)
T ss_dssp CCEECCEEEEEEECSSCE-EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEE
T ss_pred eeeeechhheeeeccCCC-ccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEe
Confidence 22 1222222221 12221 00 0 011 1222234999999999999988764 454 655
Q ss_pred cc-----CCce-------eEEEeecEEEecCCCChHHHHHhh
Q psy9141 135 TE-----DNSE-------TKITDNQLIIGADGAYSGVRKCLM 164 (379)
Q Consensus 135 ~~-----~G~~-------~~~i~adlVV~AdG~~S~vr~~l~ 164 (379)
.+ +|+. .+ ++||+||+|||.+|.+|+++.
T Consensus 184 ~~~g~~~~G~~~~~~~~g~~-i~Ad~VV~AdG~~S~vr~~l~ 224 (584)
T 2gmh_A 184 NDVGIQKDGAPKTTFERGLE-LHAKVTIFAEGCHGHLAKQLY 224 (584)
T ss_dssp CCEEECTTSCEEEEEECCCE-EECSEEEECCCTTCHHHHHHH
T ss_pred CCccccCCCCcccccCCceE-EECCEEEEeeCCCchHHHHHH
Confidence 41 3421 23 999999999999999999873
No 27
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.82 E-value=8e-20 Score=183.82 Aligned_cols=145 Identities=17% Similarity=0.181 Sum_probs=94.2
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHH--HHhCCCCce
Q psy9141 7 KSVVIVGGGLVGSLSACMFAK---NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDK--LLAHGIPMR 81 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~---~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~--l~~~~~~~~ 81 (379)
+||+|||||++|+++|+.|++ .|++|+|||+.+.+.. +.+. ++.+...++++.+|+++. +........
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~-----~~g~--~~~~~~~~~l~~lgi~~~~~~~~~~~~~~ 75 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRI-----GVGE--ATFSTVRHFFDYLGLDEREWLPRCAGGYK 75 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC------------CCE--ECCTTHHHHHHHHTCCHHHHHHHTTCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCce-----eecc--ccCcchHHHHHHcCCCHHHHHHHcCCeEe
Confidence 699999999999999999999 9999999999864321 2222 466888899999999875 444332221
Q ss_pred -eeEEE----------ecCCc-------------------E-E----------------------EeeC----C------
Q psy9141 82 -ARMIH----------GQNGK-------------------L-R----------------------EIPY----D------ 98 (379)
Q Consensus 82 -~~~~~----------~~~g~-------------------~-~----------------------~~~~----~------ 98 (379)
+..+. ...+. . . ...| .
T Consensus 76 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 155 (511)
T 2weu_A 76 LGIRFENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRS 155 (511)
T ss_dssp CEEEEESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSC
T ss_pred ccceecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCcccccccccccc
Confidence 11111 00010 0 0 0011 1
Q ss_pred --------CCC----cH-------HHHhcCCCCeEEeCceEEEEEecCCe--EEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 99 --------PVH----NQ-------VELEQYPDCNIYFQHKLINLDVNSGN--VTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 99 --------~~~----~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~--v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
... .+ .......|++++++ +|++++.++++ +.+++. +|++ ++||+||+|||.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~-~g~~---~~ad~vV~A~G~~S 230 (511)
T 2weu_A 156 TLAEQRAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTK-QHGE---ISGDLFVDCTGFRG 230 (511)
T ss_dssp CGGGCCSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEES-SSCE---EECSEEEECCGGGC
T ss_pred ccccCcCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEEC-CCCE---EEcCEEEECCCcch
Confidence 111 11 12222368999999 99999986554 667787 8876 99999999999999
Q ss_pred HHHHHh
Q psy9141 158 GVRKCL 163 (379)
Q Consensus 158 ~vr~~l 163 (379)
.+++.+
T Consensus 231 ~~~~~~ 236 (511)
T 2weu_A 231 LLINQT 236 (511)
T ss_dssp CCCCCC
T ss_pred HHHHHH
Confidence 996554
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.79 E-value=3.5e-20 Score=182.63 Aligned_cols=155 Identities=13% Similarity=0.101 Sum_probs=85.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccc-cccCHHHHHHHHHCCC--hHHHHhCCCCceee
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSIN-LALSVRGREALRRIGL--EDKLLAHGIPMRAR 83 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~-~al~~~~~~~l~~lGl--~~~l~~~~~~~~~~ 83 (379)
+||+||||||+|+++|+.|+++|++|+|||+.+..... .|+... ..+...+...++.+|+ |.... .++.+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~---~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~---~~~~~~ 96 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYS---GLRLLNTVAHNAVTVQREVALDVNEWPSEE---FGYFGH 96 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGST---TSCCCCCCCBCHHHHHHHHHTTCCCSCHHH---HCEEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhc---ccccccchhccchhhhhhhhcChhhhhhhc---ccccce
Confidence 79999999999999999999999999999998733211 122110 1356778888888864 54432 234444
Q ss_pred EEEecCCcEEEe-----eCCCCCcH-------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEe
Q psy9141 84 MIHGQNGKLREI-----PYDPVHNQ-------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIG 151 (379)
Q Consensus 84 ~~~~~~g~~~~~-----~~~~~~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~ 151 (379)
.+.........+ .......+ ....+..|+++++.. + ... +.+... .++|+||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~-v------------~~~-~l~~~~-~~ad~VV~ 161 (430)
T 3ihm_A 97 YYYVGGPQPMRFYGDLKAPSRAVDYRLYQPMLMRALEARGGKFCYDA-V------------SAE-DLEGLS-EQYDLLVV 161 (430)
T ss_dssp EEEECSSSCEEEEEEEEEEEBEECHHHHHHHHHHHHHHTTCEEEECC-C------------CGG-GHHHHH-TTSSEEEE
T ss_pred eEEECCCCccccchhcCCcceeecHHHHHHHHHHHHHHcCCEEEEEe-c------------chh-hhhhhc-ccCCEEEE
Confidence 443322211000 00111111 112223577776531 1 001 111111 46899999
Q ss_pred cCCCChHHHHHhhh--cCCCCccceeeeeeeEE
Q psy9141 152 ADGAYSGVRKCLMK--QSMFNYSQTYIEHGYME 182 (379)
Q Consensus 152 AdG~~S~vr~~l~~--~~~~~~~~~~i~~~~~~ 182 (379)
|||.+|.++.+... ....++.+..+...++.
T Consensus 162 AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~ 194 (430)
T 3ihm_A 162 CTGKYALGKVFEKQSENSPFEKPQRALCVGLFK 194 (430)
T ss_dssp CCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEE
T ss_pred CCCCcchHHhccCCCCCCcccCCCeeEEEEEEc
Confidence 99999988754422 22334444444444443
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.72 E-value=1.5e-17 Score=166.67 Aligned_cols=140 Identities=16% Similarity=0.123 Sum_probs=95.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
..+||+||||||+|+++|+.|++.|++|+|||+.+.... .+.+ .+.+.+.+.|+.+|+++......
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-----~~~~--~~~~~~~~~l~~~g~~~~~~~~~------- 156 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-----HNVL--HLWPFTIHDLRALGAKKFYGRFC------- 156 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-----CCEE--ECCHHHHHHHHTTTHHHHCTTTT-------
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-----CCcc--cCChhHHHHHHHcCCcccccccc-------
Confidence 368999999999999999999999999999999876532 2222 56789999999999865421110
Q ss_pred EEecCCcEEEeeCCCCCcH-HHHhcCCCCeEEeCceEEEEEec---CCeEEEEEcc--CCceeEEEeecEEEecCCCChH
Q psy9141 85 IHGQNGKLREIPYDPVHNQ-VELEQYPDCNIYFQHKLINLDVN---SGNVTFYRTE--DNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~-~~~~~~~gv~i~~~~~v~~i~~~---~~~v~v~~~~--~G~~~~~i~adlVV~AdG~~S~ 158 (379)
.+....+........ ....+..+++|+++++|++++.+ ++.+.+++.. +|+..+ ++||+||+|||.+|.
T Consensus 157 ----~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~-i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 157 ----TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLAS-YEFDVLISAAGGKFV 231 (497)
T ss_dssp ----CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHT-CCBSEEEECCCTTCC
T ss_pred ----ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEE-EEcCEEEECCCCCcc
Confidence 000000000000000 12222368999999999999874 3456676641 452123 899999999999999
Q ss_pred HHHHh
Q psy9141 159 VRKCL 163 (379)
Q Consensus 159 vr~~l 163 (379)
+|+..
T Consensus 232 ~r~~~ 236 (497)
T 2bry_A 232 PEGFT 236 (497)
T ss_dssp CTTCE
T ss_pred ccccc
Confidence 98765
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.63 E-value=2.5e-15 Score=142.21 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=87.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCC--------CC-CcccccccCHHHHHHHHHCCChHHHHhCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGL--------SE-GKSINLALSVRGREALRRIGLEDKLLAHG 77 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~--------~~-g~~i~~al~~~~~~~l~~lGl~~~l~~~~ 77 (379)
+||+||||||+|+++|+.|++.|++|+||||.+.+..... .+ +...-....+...+.++.+ ... ...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~ 78 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQW---QAQ-GHV 78 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHH---HHH-TSE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHH---HhC-CCe
Confidence 6999999999999999999999999999999975532100 00 1000001123333343332 111 010
Q ss_pred CCceeeEEEecCCcEEE-------eeCCCCCcH--HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecE
Q psy9141 78 IPMRARMIHGQNGKLRE-------IPYDPVHNQ--VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQL 148 (379)
Q Consensus 78 ~~~~~~~~~~~~g~~~~-------~~~~~~~~~--~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adl 148 (379)
.+..........+.... +........ ..+.+ +++|+++++|++++.++++|++++. +|+. . .+||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~~~~~v~~~-~g~~-~-~~a~~ 153 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPVSFSCRITEVFRGEEHWNLLDA-EGQN-H-GPFSH 153 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCEECSCCEEEEEECSSCEEEEET-TSCE-E-EEESE
T ss_pred eeccccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcEEecCEEEEEEEeCCEEEEEeC-CCcC-c-cccCE
Confidence 11111111111111100 000000011 22232 8899999999999999999999988 8875 1 35999
Q ss_pred EEecCCCChHHHHH
Q psy9141 149 IIGADGAYSGVRKC 162 (379)
Q Consensus 149 VV~AdG~~S~vr~~ 162 (379)
||+|+|.+|.+|..
T Consensus 154 vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 154 VIIATPAPQASTLL 167 (336)
T ss_dssp EEECSCHHHHGGGG
T ss_pred EEEcCCHHHHHHhh
Confidence 99999999998854
No 31
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.40 E-value=8.1e-13 Score=129.31 Aligned_cols=142 Identities=18% Similarity=0.201 Sum_probs=85.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCC--CCccc--cc---------ccCHHHHHHHHHCCCh
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLS--EGKSI--NL---------ALSVRGREALRRIGLE 70 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~--~g~~i--~~---------al~~~~~~~l~~lGl~ 70 (379)
+.++||+|||||++|+++|+.|++.|.+|+|+|+.+.+...... .|+.. +. .........+..+..+
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 35689999999999999999999999999999999865311000 00000 00 0001112334444322
Q ss_pred H---HHHhCCCCceeeEEEecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeE
Q psy9141 71 D---KLLAHGIPMRARMIHGQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETK 142 (379)
Q Consensus 71 ~---~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~ 142 (379)
+ .+...+.+.. ....+... + ...... ....+..+++++++++|++++.+++++.+.+. +| +
T Consensus 105 ~~~~~~~~~Gi~~~----~~~~g~~~--~-~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~-~g-~-- 173 (417)
T 3v76_A 105 DFVALVERHGIGWH----EKTLGQLF--C-DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTS-AG-T-- 173 (417)
T ss_dssp HHHHHHHHTTCCEE----ECSTTEEE--E-SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEET-TE-E--
T ss_pred HHHHHHHHcCCCcE----EeeCCEEe--e-CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEEC-Cc-E--
Confidence 2 1222232211 11222221 1 111011 12222358999999999999998889999887 77 4
Q ss_pred EEeecEEEecCCCCh
Q psy9141 143 ITDNQLIIGADGAYS 157 (379)
Q Consensus 143 ~i~adlVV~AdG~~S 157 (379)
++||.||.|+|.+|
T Consensus 174 -i~ad~VIlAtG~~S 187 (417)
T 3v76_A 174 -VDAASLVVASGGKS 187 (417)
T ss_dssp -EEESEEEECCCCSS
T ss_pred -EEeeEEEECCCCcc
Confidence 99999999999999
No 32
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.37 E-value=1.1e-12 Score=128.79 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=41.9
Q ss_pred cCCCCeEEeCc---eEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCCChH
Q psy9141 108 QYPDCNIYFQH---KLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 108 ~~~gv~i~~~~---~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+..|++|++++ +|++++.++++++ |++. +|++ ++||.||.|+|.+|.
T Consensus 172 ~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~-~G~~---i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 172 QRMGVKFVTGTPQGRVVTLIFENNDVKGAVTA-DGKI---WRAERTFLCAGASAG 222 (438)
T ss_dssp HHTTCEEEESTTTTCEEEEEEETTEEEEEEET-TTEE---EECSEEEECCGGGGG
T ss_pred HhcCCEEEeCCcCceEEEEEecCCeEEEEEEC-CCCE---EECCEEEECCCCChh
Confidence 34699999999 9999999888888 8888 8876 999999999999984
No 33
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.36 E-value=5.2e-12 Score=120.39 Aligned_cols=53 Identities=13% Similarity=0.155 Sum_probs=42.9
Q ss_pred cCCCCeEEeCceEEEEEecCCe-EEEEEccCCceeEEEeecEEEecCCCChH-HHHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGN-VTFYRTEDNSETKITDNQLIIGADGAYSG-VRKC 162 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~-v~v~~~~~G~~~~~i~adlVV~AdG~~S~-vr~~ 162 (379)
+..|++++++++|++++.++++ +.+.+. +|+..+ ++||.||.|+|.+|. +.+.
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~-~g~~~~-~~a~~VV~A~G~~s~~l~~~ 215 (369)
T 3dme_A 161 ESDGAQLVFHTPLIAGRVRPEGGFELDFG-GAEPMT-LSCRVLINAAGLHAPGLARR 215 (369)
T ss_dssp HHTTCEEECSCCEEEEEECTTSSEEEEEC-TTSCEE-EEEEEEEECCGGGHHHHHHT
T ss_pred HHCCCEEECCCEEEEEEEcCCceEEEEEC-CCceeE-EEeCEEEECCCcchHHHHHH
Confidence 3469999999999999988765 888887 885334 999999999999984 4443
No 34
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.36 E-value=1.2e-12 Score=121.50 Aligned_cols=143 Identities=15% Similarity=0.197 Sum_probs=87.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhC-CCcEEEEccCCCCCCCCCCCCccc-ccccCHHHHHHHHHCCChHHHHhCCCCcee
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKN-QYEVNLYEAREDIRNSGLSEGKSI-NLALSVRGREALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~-G~~V~viE~~~~~~~~~~~~g~~i-~~al~~~~~~~l~~lGl~~~l~~~~~~~~~ 82 (379)
..+||+||||||+|+++|+.|++. |.+|+|+|+.+.+.......+..+ .+.+.....+.|+++|+ +...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~---------~~~~ 108 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV---------AYDE 108 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTC---------CCEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCC---------Cccc
Confidence 457999999999999999999997 999999999976542211111110 00122334555555553 2110
Q ss_pred eEEEecCCcEEEeeCCCCCc-H--HHHhcCCCCeEEeCceEEEEEecCCeEE-EEEc------c--C---CceeEEEeec
Q psy9141 83 RMIHGQNGKLREIPYDPVHN-Q--VELEQYPDCNIYFQHKLINLDVNSGNVT-FYRT------E--D---NSETKITDNQ 147 (379)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~-~--~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~------~--~---G~~~~~i~ad 147 (379)
.+............ . +.+.+..+++++++++|+++..+++.+. +.+. . + |+..+ ++||
T Consensus 109 ------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~-i~ad 181 (284)
T 1rp0_A 109 ------QDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNV-MEAK 181 (284)
T ss_dssp ------CSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEE-EEEE
T ss_pred ------CCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEE-EECC
Confidence 11111000000000 0 2334457999999999999998777542 3321 0 1 33344 9999
Q ss_pred EEEecCCCChHHHHHh
Q psy9141 148 LIIGADGAYSGVRKCL 163 (379)
Q Consensus 148 lVV~AdG~~S~vr~~l 163 (379)
.||.|+|.+|.++.+.
T Consensus 182 ~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 182 IVVSSCGHDGPFGATG 197 (284)
T ss_dssp EEEECCCSSSTTTTHH
T ss_pred EEEECCCCchHHHHHH
Confidence 9999999999888765
No 35
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.36 E-value=6e-12 Score=126.89 Aligned_cols=132 Identities=16% Similarity=0.227 Sum_probs=81.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCC-------------------C--------CCCCCcccc-c---
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRN-------------------S--------GLSEGKSIN-L--- 54 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~-------------------~--------~~~~g~~i~-~--- 54 (379)
++||+||||||+|+++|+.|++.|++|+|+|+.+.... . ...+|.-.. +
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 47999999999999999999999999999999864310 0 000010000 0
Q ss_pred -ccCHHHHHHHHHCCChHHHHhCCCCceeeEEEecCCcEEEeeCCC-CCcH------HHHhcCCCCeEEeCceEEEEEec
Q psy9141 55 -ALSVRGREALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDP-VHNQ------VELEQYPDCNIYFQHKLINLDVN 126 (379)
Q Consensus 55 -al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~------~~~~~~~gv~i~~~~~v~~i~~~ 126 (379)
.......+.+...|....+.... . +... .... ....+..|++|+++++|++++.+
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~-------------~----p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~ 249 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVS-------------K----PHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME 249 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBS-------------S----CCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEES
T ss_pred cccHHHHHHHHHHcCCCceEeecc-------------c----cccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe
Confidence 00022233333333322111100 0 0000 0000 12222359999999999999988
Q ss_pred CCeEE-EEEccCCceeEEEeecEEEecCCCChH
Q psy9141 127 SGNVT-FYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 127 ~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
++++. +++. +|++ ++||+||.|+|++|.
T Consensus 250 ~~~v~gV~l~-~G~~---i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 250 DGQITGVTLS-NGEE---IKSRHVVLAVGHSAR 278 (549)
T ss_dssp SSBEEEEEET-TSCE---EECSCEEECCCTTCH
T ss_pred CCEEEEEEEC-CCCE---EECCEEEECCCCChh
Confidence 77655 7888 8887 999999999999995
No 36
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.35 E-value=2.7e-12 Score=126.79 Aligned_cols=141 Identities=14% Similarity=0.168 Sum_probs=82.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCH--HHHHHHHHCCC--------------
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSV--RGREALRRIGL-------------- 69 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~--~~~~~l~~lGl-------------- 69 (379)
++||+|||||++|+++|+.|++.|.+|+|+|+.+.+.......+.+.. .+.. ....+++.++.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRC-NVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTC-CCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCce-eccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 589999999999999999999999999999998754311000011100 0000 00112222210
Q ss_pred ---hHHHHhCCCCceeeEEEecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEecCCe-EEEEEccCCce
Q psy9141 70 ---EDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVNSGN-VTFYRTEDNSE 140 (379)
Q Consensus 70 ---~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~~~~-v~v~~~~~G~~ 140 (379)
.+.+...+.+.. ....+. .++....... ....+..|++|+++++|+++..++++ +.+++. +|++
T Consensus 105 ~~~~~~~~~~G~~~~----~~~~g~--~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~-~G~~ 177 (447)
T 2i0z_A 105 EDIITFFENLGVKLK----EEDHGR--MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ-TGEV 177 (447)
T ss_dssp HHHHHHHHHTTCCEE----ECGGGE--EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TCCE
T ss_pred HHHHHHHHhcCCceE----EeeCCE--EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC-CCCE
Confidence 011111222211 011111 1221111011 12223369999999999999987776 668888 8876
Q ss_pred eEEEeecEEEecCCCCh
Q psy9141 141 TKITDNQLIIGADGAYS 157 (379)
Q Consensus 141 ~~~i~adlVV~AdG~~S 157 (379)
++||.||.|+|.+|
T Consensus 178 ---i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 178 ---LETNHVVIAVGGKS 191 (447)
T ss_dssp ---EECSCEEECCCCSS
T ss_pred ---EECCEEEECCCCCc
Confidence 99999999999999
No 37
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.34 E-value=1e-11 Score=120.31 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=41.4
Q ss_pred CCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh-HHHHHh
Q psy9141 109 YPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS-GVRKCL 163 (379)
Q Consensus 109 ~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S-~vr~~l 163 (379)
..|++|+++++|++++.+++++++++. +| + ++||.||.|+|.+| .+++.+
T Consensus 165 ~~Gv~i~~~~~V~~i~~~~~~v~v~t~-~g-~---i~a~~VV~A~G~~s~~l~~~~ 215 (397)
T 2oln_A 165 AAGATLRAGETVTELVPDADGVSVTTD-RG-T---YRAGKVVLACGPYTNDLLEPL 215 (397)
T ss_dssp HTTCEEEESCCEEEEEEETTEEEEEES-SC-E---EEEEEEEECCGGGHHHHHGGG
T ss_pred HcCCEEECCCEEEEEEEcCCeEEEEEC-CC-E---EEcCEEEEcCCcChHHHhhhc
Confidence 468999999999999998888888776 55 4 99999999999995 455543
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.33 E-value=5.9e-12 Score=130.70 Aligned_cols=149 Identities=19% Similarity=0.276 Sum_probs=87.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCC-CCCCCCcccccccC--------------HHHHHHHHHCCCh
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRN-SGLSEGKSINLALS--------------VRGREALRRIGLE 70 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~-~~~~~g~~i~~al~--------------~~~~~~l~~lGl~ 70 (379)
.+||+|||||++|+++|+.|+++|++|+|||+.+.+.. .+...+..+..... ..+.++++.+++.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVK 351 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Confidence 48999999999999999999999999999999764432 11111111110000 1134444444310
Q ss_pred ---------------------HHHHhCCCCceeeEEEecCCc---------E--EEeeCCCC-CcH------HHHhcCCC
Q psy9141 71 ---------------------DKLLAHGIPMRARMIHGQNGK---------L--REIPYDPV-HNQ------VELEQYPD 111 (379)
Q Consensus 71 ---------------------~~l~~~~~~~~~~~~~~~~g~---------~--~~~~~~~~-~~~------~~~~~~~g 111 (379)
..+...+.+.....+.+.... . ...+.... ... ....+..|
T Consensus 352 ~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~~G 431 (676)
T 3ps9_A 352 FDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQG 431 (676)
T ss_dssp CCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHHTT
T ss_pred cCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHhCC
Confidence 001111111111111110000 0 00000000 001 22223468
Q ss_pred CeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 112 CNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 112 v~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
++|+++++|++++.++++|.+++. +|.+ ++||.||.|+|.+|.
T Consensus 432 v~i~~~t~V~~l~~~~~~v~V~t~-~G~~---i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 432 LQIYYQYQLQNFSRKDDCWLLNFA-GDQQ---ATHSVVVLANGHQIS 474 (676)
T ss_dssp CEEEESCCEEEEEEETTEEEEEET-TSCE---EEESEEEECCGGGGG
T ss_pred CEEEeCCeeeEEEEeCCeEEEEEC-CCCE---EECCEEEECCCcchh
Confidence 999999999999999999999888 8776 999999999999985
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.32 E-value=6.7e-12 Score=120.81 Aligned_cols=51 Identities=4% Similarity=0.131 Sum_probs=42.3
Q ss_pred cCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCCChH-HHHHh
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGAYSG-VRKCL 163 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~-vr~~l 163 (379)
+..|++++++++|++++.++++++ +++. +| + ++||.||.|+|.+|. +.+.+
T Consensus 160 ~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~-~g-~---i~a~~VV~A~G~~s~~l~~~~ 212 (382)
T 1y56_B 160 KEYGAKLLEYTEVKGFLIENNEIKGVKTN-KG-I---IKTGIVVNATNAWANLINAMA 212 (382)
T ss_dssp HHTTCEEECSCCEEEEEESSSBEEEEEET-TE-E---EECSEEEECCGGGHHHHHHHH
T ss_pred HHCCCEEECCceEEEEEEECCEEEEEEEC-Cc-E---EECCEEEECcchhHHHHHHHc
Confidence 346899999999999998888887 7776 66 4 999999999999994 45443
No 40
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.31 E-value=1.5e-11 Score=124.98 Aligned_cols=151 Identities=14% Similarity=0.144 Sum_probs=90.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCC---------------
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGL--------------- 69 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl--------------- 69 (379)
.++||+|||||++|+++|+.|++.|.+|+||||.+.....+...+.++....+ ...+.+|+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~----~~~~~~g~~ds~~~~~~~~~~~~ 195 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGT----KQQTAHGVEDKVEWFIEDAMKGG 195 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSC----HHHHHTTCCCCHHHHHHHHHHHT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCC----HHHHHhCCCCCHHHHHHHHHHhc
Confidence 45799999999999999999999999999999998765432222333321111 11111111
Q ss_pred -------------------hHHHHhCCCCceeeEEEecCCcE---EEeeCCC-CCcH------HHHhcCCCCeEEeCceE
Q psy9141 70 -------------------EDKLLAHGIPMRARMIHGQNGKL---REIPYDP-VHNQ------VELEQYPDCNIYFQHKL 120 (379)
Q Consensus 70 -------------------~~~l~~~~~~~~~~~~~~~~g~~---~~~~~~~-~~~~------~~~~~~~gv~i~~~~~v 120 (379)
.+.+...+.++... ....+.. ...+... ..+. ....+..|++|+++++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~--~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v 273 (566)
T 1qo8_A 196 RQQNDIKLVTILAEQSADGVQWLESLGANLDDL--KRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRV 273 (566)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEE--ECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEE
T ss_pred CCCCCHHHHHHHHhccHHHHHHHHhcCCccccc--cccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEE
Confidence 11122233333211 1111111 1111111 1111 12223358999999999
Q ss_pred EEEEecC-CeE---EEEEccCCceeEEEeecEEEecCCCChHHHHHh
Q psy9141 121 INLDVNS-GNV---TFYRTEDNSETKITDNQLIIGADGAYSGVRKCL 163 (379)
Q Consensus 121 ~~i~~~~-~~v---~v~~~~~G~~~~~i~adlVV~AdG~~S~vr~~l 163 (379)
+++..++ +.+ ++... +|+..+ ++||.||.|+|.+|..++++
T Consensus 274 ~~l~~~~~g~v~Gv~~~~~-~g~~~~-i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 274 VKLVVNDDHSVVGAVVHGK-HTGYYM-IGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEECTTSBEEEEEEEET-TTEEEE-EEEEEEEECCCCCTTCHHHH
T ss_pred EEEEECCCCcEEEEEEEeC-CCcEEE-EEcCEEEEecCCcccCHHHH
Confidence 9998877 643 44444 776555 99999999999999887766
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.29 E-value=4.4e-12 Score=131.90 Aligned_cols=46 Identities=15% Similarity=0.099 Sum_probs=40.5
Q ss_pred CCCCeEEeCceEEEEEecCCeEEEEEccCCc-eeEEEeecEEEecCCCChH
Q psy9141 109 YPDCNIYFQHKLINLDVNSGNVTFYRTEDNS-ETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 109 ~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~-~~~~i~adlVV~AdG~~S~ 158 (379)
..|++|+++++|++++.++++|.+++. +|. + ++||.||.|+|.+|.
T Consensus 424 ~~Gv~i~~~t~V~~l~~~~~~v~V~t~-~G~~~---i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 424 QNGMTCHYQHELQRLKRIDSQWQLTFG-QSQAA---KHHATVILATGHRLP 470 (689)
T ss_dssp HTTCEEEESCCEEEEEECSSSEEEEEC--CCCC---EEESEEEECCGGGTT
T ss_pred hCCCEEEeCCeEeEEEEeCCeEEEEeC-CCcEE---EECCEEEECCCcchh
Confidence 468999999999999998888988888 776 6 999999999999984
No 42
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.29 E-value=2.8e-11 Score=123.16 Aligned_cols=150 Identities=15% Similarity=0.125 Sum_probs=88.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCC----------------
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGL---------------- 69 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl---------------- 69 (379)
++||+|||||++|+++|+.|++.|.+|+||||.+.....+...+.++....+. ..+++|+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~----~~~~~g~~ds~~~~~~~~~~~g~ 201 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTD----QQKAKKITDSPELMFEDTMKGGQ 201 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCH----HHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCH----HHHHhCCCCCHHHHHHHHHHhcC
Confidence 58999999999999999999999999999999987653322223333211110 1111111
Q ss_pred ------------------hHHHHhCCCCceeeEEEecCCcE---EEeeCC-CCCcH------HHHhcCCCCeEEeCceEE
Q psy9141 70 ------------------EDKLLAHGIPMRARMIHGQNGKL---REIPYD-PVHNQ------VELEQYPDCNIYFQHKLI 121 (379)
Q Consensus 70 ------------------~~~l~~~~~~~~~~~~~~~~g~~---~~~~~~-~~~~~------~~~~~~~gv~i~~~~~v~ 121 (379)
.+.+...+.++.. +....+.. ...+.. ...+. ....+..+++|+++++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~ 279 (571)
T 1y0p_A 202 NINDPALVKVLSSHSKDSVDWMTAMGADLTD--VGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGI 279 (571)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCE--EECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEE
T ss_pred CCCCHHHHHHHHHccHHHHHHHHhcCCCCcc--CcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEee
Confidence 1112223333321 11111211 011111 01111 122233689999999999
Q ss_pred EEEecC-Ce---EEEEEccCCceeEEEeecEEEecCCCChHHHHHh
Q psy9141 122 NLDVNS-GN---VTFYRTEDNSETKITDNQLIIGADGAYSGVRKCL 163 (379)
Q Consensus 122 ~i~~~~-~~---v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr~~l 163 (379)
++..++ +. +++... +|+..+ ++||.||.|+|.+|..++++
T Consensus 280 ~l~~~~~g~v~Gv~~~~~-~g~~~~-i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 280 EVLKDDKGTVKGILVKGM-YKGYYW-VKADAVILATGGFAKNNERV 323 (571)
T ss_dssp EEEECTTSCEEEEEEEET-TTEEEE-EECSEEEECCCCCTTCHHHH
T ss_pred EeEEcCCCeEEEEEEEeC-CCcEEE-EECCeEEEeCCCcccCHHHH
Confidence 998876 54 344444 676555 99999999999999766554
No 43
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.26 E-value=9.3e-12 Score=119.39 Aligned_cols=51 Identities=10% Similarity=0.194 Sum_probs=42.5
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH-HHHHh
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG-VRKCL 163 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~-vr~~l 163 (379)
+..|++|+++++|++++.+++++.|++. +| + ++||.||.|+|.+|. +.+.+
T Consensus 165 ~~~Gv~i~~~~~V~~i~~~~~~~~V~t~-~g-~---i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 165 RRNQGQVLCNHEALEIRRVDGAWEVRCD-AG-S---YRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp HHTTCEEESSCCCCEEEEETTEEEEECS-SE-E---EEESEEEECCGGGHHHHHHHH
T ss_pred HHCCCEEEcCCEEEEEEEeCCeEEEEeC-CC-E---EEcCEEEECCChhHHHHHHHh
Confidence 3469999999999999998888888877 66 4 999999999999994 44443
No 44
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.26 E-value=1.9e-11 Score=124.02 Aligned_cols=55 Identities=11% Similarity=0.119 Sum_probs=42.2
Q ss_pred cCCCCeEEeCceEEEEEecCCeEE-EEEcc--CCceeEEEeecEEEecCCCCh-HHHHHh
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVT-FYRTE--DNSETKITDNQLIIGADGAYS-GVRKCL 163 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~--~G~~~~~i~adlVV~AdG~~S-~vr~~l 163 (379)
...|++|+++++|+++..+++++. +++.+ +|+..+ ++||.||.|+|.+| .+++.+
T Consensus 181 ~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~-i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 181 VARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHT-IYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp HHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEE-EEEEEEEECCGGGHHHHHHTT
T ss_pred HHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEE-EECCEEEECCCcchHHHHHhc
Confidence 346999999999999999887654 55441 354445 99999999999999 456554
No 45
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.26 E-value=3.9e-11 Score=121.19 Aligned_cols=157 Identities=16% Similarity=0.183 Sum_probs=79.5
Q ss_pred CCCC--CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCH-HHH-----HHHHHC-C---
Q psy9141 1 MKCN--SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSV-RGR-----EALRRI-G--- 68 (379)
Q Consensus 1 M~~m--~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~-~~~-----~~l~~l-G--- 68 (379)
|++| .++||+|||||++||++|+.|++ |.+|+|+||.+.....+...+.++...+.+ .+. +.++.- +
T Consensus 1 M~~m~~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d 79 (540)
T 1chu_A 1 MNTLPEHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICD 79 (540)
T ss_dssp -CBCCSEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCCCCCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCC
Confidence 5444 35899999999999999999999 999999999986543322222222111110 111 111110 0
Q ss_pred -------------ChHHHHhCCCCceeeE---------EEecCCcEE-E-eeCCCCCcH-------HHHhcCCCCeEEeC
Q psy9141 69 -------------LEDKLLAHGIPMRARM---------IHGQNGKLR-E-IPYDPVHNQ-------VELEQYPDCNIYFQ 117 (379)
Q Consensus 69 -------------l~~~l~~~~~~~~~~~---------~~~~~g~~~-~-~~~~~~~~~-------~~~~~~~gv~i~~~ 117 (379)
..+.+...+.++.... .....+... + +......+. ..+.+.++++|+++
T Consensus 80 ~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~ 159 (540)
T 1chu_A 80 RHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLER 159 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECS
T ss_pred HHHHHHHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeC
Confidence 0112222333322110 000001000 0 000000011 33444479999999
Q ss_pred ceEEEEEe-cCC------eEE-EEEc--cCCceeEEEeecEEEecCCCChHH
Q psy9141 118 HKLINLDV-NSG------NVT-FYRT--EDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 118 ~~v~~i~~-~~~------~v~-v~~~--~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
+.|+++.. +++ .+. +... .+|+..+ +.|+.||.|+|.+|.+
T Consensus 160 ~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~-i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 160 TNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVET-CHAKAVVLATGGASKV 210 (540)
T ss_dssp EEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEE-EECSEEEECCCCCGGG
T ss_pred cEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEE-EEcCeEEECCCCcccc
Confidence 99999987 434 433 3332 2676555 9999999999999975
No 46
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=1.6e-11 Score=119.54 Aligned_cols=143 Identities=18% Similarity=0.187 Sum_probs=84.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCC--CCCcc--cccccC---------HHHHHHHHHCCC-
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGL--SEGKS--INLALS---------VRGREALRRIGL- 69 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~--~~g~~--i~~al~---------~~~~~~l~~lGl- 69 (379)
|+++||+||||||+|+++|+.|++.|.+|+|+|+.+.+..... ..|+. .+.... ......+..+..
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 4579999999999999999999999999999999875521000 00000 000000 001112222221
Q ss_pred --hHHHHhCCCCceeeEEEecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEec----CCeEEEEEccCC
Q psy9141 70 --EDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVN----SGNVTFYRTEDN 138 (379)
Q Consensus 70 --~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~----~~~v~v~~~~~G 138 (379)
.+.+...+.+... ...+.. ++.. .... ....+..|++++++++|+++..+ ++++.+++. +|
T Consensus 82 ~~~~~~~~~Gi~~~~----~~~g~~--~p~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~-~g 153 (401)
T 2gqf_A 82 DFISLVAEQGITYHE----KELGQL--FCDE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVN-ST 153 (401)
T ss_dssp HHHHHHHHTTCCEEE----CSTTEE--EETT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEET-TE
T ss_pred HHHHHHHhCCCceEE----CcCCEE--ccCC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEEC-CC
Confidence 1112222332211 112222 2222 1111 22223368999999999999876 566888776 66
Q ss_pred ceeEEEeecEEEecCCCChH
Q psy9141 139 SETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 139 ~~~~~i~adlVV~AdG~~S~ 158 (379)
+ ++||.||.|+|.+|.
T Consensus 154 -~---i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 154 -Q---WQCKNLIVATGGLSM 169 (401)
T ss_dssp -E---EEESEEEECCCCSSC
T ss_pred -E---EECCEEEECCCCccC
Confidence 4 999999999999994
No 47
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.26 E-value=7.3e-12 Score=118.72 Aligned_cols=125 Identities=13% Similarity=0.096 Sum_probs=79.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
|+++||+|||||++|+++|..|++.|++|+|+|+.+.+... . .. .|+.+... .+....
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~-------~-----~~---------~~~~~~~~-~~~~~~ 58 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGA-------W-----QH---------AWHSLHLF-SPAGWS 58 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGG-------G-----GG---------SCTTCBCS-SCGGGS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc-------c-----cC---------CCCCcEec-Cchhhh
Confidence 34589999999999999999999999999999998755311 0 00 01000000 000000
Q ss_pred EEEecCCcEE-EeeCCCCCcH------HHHhcCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCC
Q psy9141 84 MIHGQNGKLR-EIPYDPVHNQ------VELEQYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGA 155 (379)
Q Consensus 84 ~~~~~~g~~~-~~~~~~~~~~------~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~ 155 (379)
...+... .......... ....+..+++++++++|++++.+++.+. +++. +| + +++|.||.|+|.
T Consensus 59 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~-~g-~---~~~d~vV~AtG~ 130 (357)
T 4a9w_A 59 ---SIPGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARD-GR-Q---WLARAVISATGT 130 (357)
T ss_dssp ---CCSSSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETT-SC-E---EEEEEEEECCCS
T ss_pred ---hCCCCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeC-CC-E---EEeCEEEECCCC
Confidence 0000000 0000011011 2333346899999999999999999988 8877 76 4 999999999999
Q ss_pred ChH
Q psy9141 156 YSG 158 (379)
Q Consensus 156 ~S~ 158 (379)
+|.
T Consensus 131 ~~~ 133 (357)
T 4a9w_A 131 WGE 133 (357)
T ss_dssp GGG
T ss_pred CCC
Confidence 874
No 48
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.25 E-value=3.6e-11 Score=108.10 Aligned_cols=129 Identities=17% Similarity=0.198 Sum_probs=78.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
|+++||+||||||+|+.+|+.|++.|.+|+|||+.......+ . ...+. .+.. ..++ .++.
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~-~-~~~~~-~~~~--~~~~------~~~~--------- 60 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMP-F-LPPKP-PFPP--GSLL------ERAY--------- 60 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC-S-SCCCS-CCCT--TCHH------HHHC---------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcc-c-Ccccc-ccch--hhHH------hhhc---------
Confidence 346899999999999999999999999999999984211110 0 00000 0000 0011 1110
Q ss_pred EEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeE-EEEEccCCceeEEEeecEEEecCCCChHHHHH
Q psy9141 84 MIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNV-TFYRTEDNSETKITDNQLIIGADGAYSGVRKC 162 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v-~v~~~~~G~~~~~i~adlVV~AdG~~S~vr~~ 162 (379)
+..+. ....+... -...+.+.++++++ +++|++++.+++++ .+.+. +|++ ++||+||.|+|.+|..+..
T Consensus 61 ---d~~g~-~~~~~~~~-l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~-~g~~---i~a~~VV~A~G~~s~~~~~ 130 (232)
T 2cul_A 61 ---DPKDE-RVWAFHAR-AKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTW-EGPP---ARGEKVVLAVGSFLGARLF 130 (232)
T ss_dssp ---CTTCC-CHHHHHHH-HHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEET-TSCC---EECSEEEECCTTCSSCEEE
T ss_pred ---cCCCC-CHHHHHHH-HHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEEC-CCCE---EECCEEEECCCCChhhcee
Confidence 01110 00000000 00233444589998 57999999887775 47777 8876 9999999999999977754
No 49
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.25 E-value=5.4e-11 Score=114.52 Aligned_cols=46 Identities=11% Similarity=0.259 Sum_probs=39.4
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+..|++++++++|++++.+++++.+++. +| + ++||.||.|+|.+|.
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~g-~---~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 161 EARGAKVLTHTRVEDFDISPDSVKIETA-NG-S---YTADKLIVSMGAWNS 206 (389)
T ss_dssp HHTTCEEECSCCEEEEEECSSCEEEEET-TE-E---EEEEEEEECCGGGHH
T ss_pred HHCCCEEEcCcEEEEEEecCCeEEEEeC-CC-E---EEeCEEEEecCccHH
Confidence 3458999999999999988888888776 65 4 999999999999984
No 50
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.24 E-value=1.8e-11 Score=115.83 Aligned_cols=142 Identities=13% Similarity=0.208 Sum_probs=86.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCccc-ccccCHHHHHHHHHCCChHHHHhCCCCcee
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSI-NLALSVRGREALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i-~~al~~~~~~~l~~lGl~~~l~~~~~~~~~ 82 (379)
++||+||||||+|+++|+.|+++ |++|+|||+.+.+.......+... ...+.+...++|+.+|+.- ..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~---------~~ 149 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPY---------ED 149 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCC---------EE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcc---------cc
Confidence 58999999999999999999997 999999999976542111111100 0112345567777776521 10
Q ss_pred eEEEecCCcEEEeeCCCCCcH---HHHhcCCCCeEEeCceEEEEEecCC-------------------eE---EEEE---
Q psy9141 83 RMIHGQNGKLREIPYDPVHNQ---VELEQYPDCNIYFQHKLINLDVNSG-------------------NV---TFYR--- 134 (379)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~~---~~~~~~~gv~i~~~~~v~~i~~~~~-------------------~v---~v~~--- 134 (379)
.+............+ ..+.+.+++++++++.++++..+++ .+ .+..
T Consensus 150 ------~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v 223 (344)
T 3jsk_A 150 ------EGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLV 223 (344)
T ss_dssp ------CSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHH
T ss_pred ------cCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeee
Confidence 011111110000001 3344457999999999999877652 22 2211
Q ss_pred ccCC------ceeEEEeecEEEecCCCChHHHHHh
Q psy9141 135 TEDN------SETKITDNQLIIGADGAYSGVRKCL 163 (379)
Q Consensus 135 ~~~G------~~~~~i~adlVV~AdG~~S~vr~~l 163 (379)
..+| +..+ ++|++||+|||..|.+++.+
T Consensus 224 ~~~g~~~~~~d~~~-i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 224 SMHHDDQSAMDPNT-INAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp HTTSSSSSCCBCEE-EECSEEEECCCSSSSSSCHH
T ss_pred eccCCcccccCceE-EEcCEEEECCCCCchhhHHH
Confidence 0122 2235 99999999999999865554
No 51
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.24 E-value=6.8e-11 Score=113.20 Aligned_cols=46 Identities=15% Similarity=0.264 Sum_probs=39.5
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+..|++++++++|++++.+++++.+++. +|+ ++||.||.|+|.+|.
T Consensus 160 ~~~G~~i~~~~~V~~i~~~~~~~~v~~~-~g~----~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 160 KEAGCAQLFNCPVTAIRHDDDGVTIETA-DGE----YQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHTTCEEECSCCEEEEEECSSSEEEEES-SCE----EEEEEEEECCGGGGG
T ss_pred HHCCCEEEcCCEEEEEEEcCCEEEEEEC-CCe----EEcCEEEEcCCccHH
Confidence 3468999999999999988888888877 663 899999999999983
No 52
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.24 E-value=2.3e-11 Score=116.98 Aligned_cols=50 Identities=14% Similarity=0.246 Sum_probs=41.9
Q ss_pred CCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH-HHHHh
Q psy9141 109 YPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG-VRKCL 163 (379)
Q Consensus 109 ~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~-vr~~l 163 (379)
..|++++++++|++++.+++++.+++. +| + ++||.||.|+|.+|. +.+.+
T Consensus 176 ~~g~~i~~~~~v~~i~~~~~~~~v~~~-~g-~---~~a~~vV~A~G~~s~~l~~~~ 226 (382)
T 1ryi_A 176 MLGAEIFEHTPVLHVERDGEALFIKTP-SG-D---VWANHVVVASGVWSGMFFKQL 226 (382)
T ss_dssp HTTCEEETTCCCCEEECSSSSEEEEET-TE-E---EEEEEEEECCGGGTHHHHHHT
T ss_pred HCCCEEEcCCcEEEEEEECCEEEEEcC-Cc-e---EEcCEEEECCChhHHHHHHhc
Confidence 358999999999999988888877776 66 4 999999999999986 55544
No 53
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.22 E-value=8.8e-11 Score=117.60 Aligned_cols=54 Identities=6% Similarity=0.021 Sum_probs=41.9
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEc--cCCceeEEEeecEEEecCCCChH-HHHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRT--EDNSETKITDNQLIIGADGAYSG-VRKC 162 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~--~~G~~~~~i~adlVV~AdG~~S~-vr~~ 162 (379)
...|++++++++|++++.+++.+.+++. .+|++.+ ++||.||.|+|.+|. +++.
T Consensus 160 ~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~-i~A~~VV~AtG~~s~~l~~~ 216 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYS-WQARGLVNATGPWVKQFFDD 216 (501)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEE-EEESCEEECCGGGHHHHHHH
T ss_pred HHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEE-EECCEEEECCChhHHHHHHH
Confidence 3468999999999999988776666663 1576445 999999999999995 4443
No 54
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.21 E-value=2.5e-11 Score=117.57 Aligned_cols=50 Identities=8% Similarity=-0.043 Sum_probs=41.1
Q ss_pred CCCCeEEeCceEEEEEecCCe-EEEEEccCCceeEEEeecEEEecCCCCh-HHHHHh
Q psy9141 109 YPDCNIYFQHKLINLDVNSGN-VTFYRTEDNSETKITDNQLIIGADGAYS-GVRKCL 163 (379)
Q Consensus 109 ~~gv~i~~~~~v~~i~~~~~~-v~v~~~~~G~~~~~i~adlVV~AdG~~S-~vr~~l 163 (379)
..|++++++++|++++.++++ +.+++. +| + ++||.||.|+|.+| .+++.+
T Consensus 186 ~~g~~i~~~~~v~~i~~~~~~~~~v~~~-~g-~---~~a~~vV~a~G~~s~~l~~~~ 237 (405)
T 2gag_B 186 EMGVDIIQNCEVTGFIKDGEKVTGVKTT-RG-T---IHAGKVALAGAGHSSVLAEMA 237 (405)
T ss_dssp HTTCEEECSCCEEEEEESSSBEEEEEET-TC-C---EEEEEEEECCGGGHHHHHHHH
T ss_pred HCCCEEEcCCeEEEEEEeCCEEEEEEeC-Cc-e---EECCEEEECCchhHHHHHHHc
Confidence 368999999999999987765 457776 77 4 99999999999998 566654
No 55
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.18 E-value=2.1e-11 Score=118.70 Aligned_cols=51 Identities=16% Similarity=0.163 Sum_probs=36.1
Q ss_pred cCCCCeEEeCceEE---------EEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh-HHHH-Hh
Q psy9141 108 QYPDCNIYFQHKLI---------NLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS-GVRK-CL 163 (379)
Q Consensus 108 ~~~gv~i~~~~~v~---------~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S-~vr~-~l 163 (379)
+..|++++++++|+ +++.+++++.+++. +| + ++||.||.|+|.+| .+++ .+
T Consensus 183 ~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~-~g-~---i~a~~VV~A~G~~s~~l~~~~~ 244 (405)
T 3c4n_A 183 IGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHE-TR-Q---IRAGVIIVAAGAAGPALVEQGL 244 (405)
T ss_dssp HTTTCEEECSCEEEEETTEEEEECBCC-------CBC-CE-E---EEEEEEEECCGGGHHHHHHHHH
T ss_pred HHCCCEEEcCCEEEeccccccccceEeeCCeEEEEEC-Cc-E---EECCEEEECCCccHHHHHHHhc
Confidence 44699999999999 88877777766655 55 4 99999999999999 5766 54
No 56
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.18 E-value=9.4e-11 Score=115.62 Aligned_cols=155 Identities=15% Similarity=0.132 Sum_probs=80.3
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCCCCCCCCCCCCcccc-cccCHHHHHHHHHCCChHH--HHh
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEAREDIRNSGLSEGKSIN-LALSVRGREALRRIGLEDK--LLA 75 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~~~~~~~~~~g~~i~-~al~~~~~~~l~~lGl~~~--l~~ 75 (379)
|+++..+||+||||||+|+++|..|++.|. +|+|||+.+.........+.... +.+.... ..+..-.++.. +..
T Consensus 1 M~~~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~-~~~~~~~~~~g~~~~~ 79 (447)
T 2gv8_A 1 MCLPTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTN-PILTTEPIVGPAALPV 79 (447)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCC-TTCCCCCBCCSSSCCB
T ss_pred CCCCCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCccccccccc-ccccccccccccccCC
Confidence 555567899999999999999999999999 99999998755422111111000 0000000 00000000000 000
Q ss_pred CCCCceeeEEEecCCcE---EEeeCC----CCCcH-------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccC---C
Q psy9141 76 HGIPMRARMIHGQNGKL---REIPYD----PVHNQ-------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTED---N 138 (379)
Q Consensus 76 ~~~~~~~~~~~~~~g~~---~~~~~~----~~~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~---G 138 (379)
....+......+..... ..+++. ..... ....+..+..++++++|++++.+++.++|++. + |
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~-~~~~G 158 (447)
T 2gv8_A 80 YPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYK-GTKAG 158 (447)
T ss_dssp CCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEE-ESSTT
T ss_pred ccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEe-ecCCC
Confidence 00000000000000000 000000 00011 12222236789999999999988888888876 5 7
Q ss_pred c-eeEEEeecEEEecCCCChH
Q psy9141 139 S-ETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 139 ~-~~~~i~adlVV~AdG~~S~ 158 (379)
+ ..+ +++|.||.|+|.+|.
T Consensus 159 ~~~~~-~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 159 SPISK-DIFDAVSICNGHYEV 178 (447)
T ss_dssp CCEEE-EEESEEEECCCSSSS
T ss_pred CeeEE-EEeCEEEECCCCCCC
Confidence 6 234 899999999999874
No 57
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.17 E-value=1.1e-10 Score=116.36 Aligned_cols=52 Identities=10% Similarity=0.119 Sum_probs=38.6
Q ss_pred cCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCCChHHHHHh
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGAYSGVRKCL 163 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~vr~~l 163 (379)
+..|++|+++++|++|+.++++++ |+++ ||++ ++||.||.+.+.....++.+
T Consensus 232 ~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~-~g~~---~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 232 QDLGGEVVLNARVSHMETTGNKIEAVHLE-DGRR---FLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHTTCEEECSCCEEEEEEETTEEEEEEET-TSCE---EECSCEEECCC---------
T ss_pred HHhCCceeeecceeEEEeeCCeEEEEEec-CCcE---EEcCEEEECCCHHHHHHHhc
Confidence 346899999999999999999887 7888 9998 99999999888887776655
No 58
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.17 E-value=3.8e-11 Score=113.32 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=79.5
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
|+ |+++||+||||||+|+++|+.|++.|++|+|||+.+... |. . ... .+.
T Consensus 1 m~-~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g------g~-~------------------~~~----~~~ 50 (335)
T 2zbw_A 1 MA-ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG------GQ-L------------------TAL----YPE 50 (335)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC------HH-H------------------HHT----CTT
T ss_pred CC-CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC------Ce-e------------------ecc----CCC
Confidence 44 456899999999999999999999999999999986442 11 0 000 000
Q ss_pred eeeEEEecCCcEEEeeCCCCCcH-HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 81 RARMIHGQNGKLREIPYDPVHNQ-VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 81 ~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
. .+++..+. ........... ....+..+++++++++|++++.+++.+++.+. +|++ +++|.||.|+|.+|..
T Consensus 51 ~--~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~-~g~~---~~~~~lv~AtG~~~~~ 123 (335)
T 2zbw_A 51 K--YIYDVAGF-PKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTS-QGNA---YTAKAVIIAAGVGAFE 123 (335)
T ss_dssp S--EECCSTTC-SSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEET-TSCE---EEEEEEEECCTTSEEE
T ss_pred c--eeeccCCC-CCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEEC-CCCE---EEeCEEEECCCCCCCC
Confidence 0 01110000 00000000000 12223347899999999999988878888887 8876 9999999999998754
Q ss_pred HH
Q psy9141 160 RK 161 (379)
Q Consensus 160 r~ 161 (379)
++
T Consensus 124 p~ 125 (335)
T 2zbw_A 124 PR 125 (335)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 59
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.17 E-value=5.8e-11 Score=120.97 Aligned_cols=146 Identities=22% Similarity=0.259 Sum_probs=84.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC-CCCCCCCCCcccccccC-HHHHHHHHHCC-ChHHHHhC-CCCc
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED-IRNSGLSEGKSINLALS-VRGREALRRIG-LEDKLLAH-GIPM 80 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~-~~~~~~~~g~~i~~al~-~~~~~~l~~lG-l~~~l~~~-~~~~ 80 (379)
.++||+|||||++|+++|+.|++.|.+|+|||+.+. ....+ +...+. .+. ....+.++.+| ........ +..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~--Cnps~g-gia~~~lv~ei~algg~~~~~~d~~gi~- 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMS--CNPAIG-GIGKGHLVKEVDALGGLMAKAIDQAGIQ- 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS--SSSEEE-STTHHHHHHHHHHTTCSHHHHHHHHEEE-
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccc--cccccc-chhhHHHHHHHHHhccHHHHHhhhcccc-
Confidence 468999999999999999999999999999999842 22111 111110 111 22334455554 22222111 111
Q ss_pred eeeEEEec-CCcE-E--EeeCCCC-CcH---HHHhcCCCCeEEeCceEEEEEecCCeE-EEEEccCCceeEEEeecEEEe
Q psy9141 81 RARMIHGQ-NGKL-R--EIPYDPV-HNQ---VELEQYPDCNIYFQHKLINLDVNSGNV-TFYRTEDNSETKITDNQLIIG 151 (379)
Q Consensus 81 ~~~~~~~~-~g~~-~--~~~~~~~-~~~---~~~~~~~gv~i~~~~~v~~i~~~~~~v-~v~~~~~G~~~~~i~adlVV~ 151 (379)
+...+. .+.. . ....+.. ..+ ..+.+.+|+++ ++++|+++..+++.+ .|.+. +|.+ ++||.||.
T Consensus 103 --f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~-dG~~---I~Ad~VVL 175 (651)
T 3ces_A 103 --FRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQ-MGLK---FRAKAVVL 175 (651)
T ss_dssp --EEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEET-TSEE---EEEEEEEE
T ss_pred --hhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEEC-CCCE---EECCEEEE
Confidence 111111 1110 0 0001100 001 23333379999 567999998877765 47777 8866 99999999
Q ss_pred cCCCChHHHH
Q psy9141 152 ADGAYSGVRK 161 (379)
Q Consensus 152 AdG~~S~vr~ 161 (379)
|+|.+|..+.
T Consensus 176 ATGt~s~~~~ 185 (651)
T 3ces_A 176 TVGTFLDGKI 185 (651)
T ss_dssp CCSTTTCCEE
T ss_pred cCCCCccCcc
Confidence 9999986543
No 60
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.16 E-value=1.8e-10 Score=98.98 Aligned_cols=110 Identities=13% Similarity=0.149 Sum_probs=77.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
+||+|||||++|+.+|..|++.|.+|+|+|+.+..... ... +.. .+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~----~~~----~~~-------------------~~------- 47 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKG----VSR----VPN-------------------YP------- 47 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTT----CSC----CCC-------------------ST-------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccC----chh----hhc-------------------cC-------
Confidence 59999999999999999999999999999998622110 000 000 00
Q ss_pred ecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHHH
Q psy9141 87 GQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRK 161 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr~ 161 (379)
+ ++....... ....+..+++++++ +|++++.+++++.+++. +| + +++|+||.|+|.+|.+++
T Consensus 48 ---~----~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~-~g-~---i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 48 ---G----LLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETE-EG-V---EKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp ---T----CTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECS-SC-E---EEEEEEEECCTTCCHHHH
T ss_pred ---C----CcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEEC-CC-E---EEECEEEECCCCCCCccc
Confidence 0 000000000 22223358999999 99999988878888887 77 5 999999999999998766
Q ss_pred Hh
Q psy9141 162 CL 163 (379)
Q Consensus 162 ~l 163 (379)
.+
T Consensus 115 ~~ 116 (180)
T 2ywl_A 115 LL 116 (180)
T ss_dssp HH
T ss_pred cC
Confidence 55
No 61
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.14 E-value=5.3e-10 Score=113.73 Aligned_cols=154 Identities=16% Similarity=0.100 Sum_probs=87.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccC----------------------------
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALS---------------------------- 57 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~---------------------------- 57 (379)
.+||+|||+|++|+++|+.|++.|.+|+|+|+.+.........+.++....+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 5799999999999999999999999999999998665332222222211000
Q ss_pred HHHHHHHHHCC--ChHHHHhCCCCceeeEEEecCCcE---EEeeCCC-CCcH------HHHhcCCCCeEEeCceEEEEEe
Q psy9141 58 VRGREALRRIG--LEDKLLAHGIPMRARMIHGQNGKL---REIPYDP-VHNQ------VELEQYPDCNIYFQHKLINLDV 125 (379)
Q Consensus 58 ~~~~~~l~~lG--l~~~l~~~~~~~~~~~~~~~~g~~---~~~~~~~-~~~~------~~~~~~~gv~i~~~~~v~~i~~ 125 (379)
+...+.+..-. ..+.+...+.++... ....+.. ...+... ..+. ....+..|++|+++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~--~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDV--GRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEE--ECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccc--cccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEE
Confidence 00011110000 011222223333211 1111211 1111111 1111 1222335999999999999987
Q ss_pred cC-Ce---EEEEEccCCceeEEEeecEEEecCCCChHHHHHh
Q psy9141 126 NS-GN---VTFYRTEDNSETKITDNQLIIGADGAYSGVRKCL 163 (379)
Q Consensus 126 ~~-~~---v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr~~l 163 (379)
++ +. +.+... +|+..+ +.||.||.|+|.+|..++++
T Consensus 284 ~~~g~v~GV~~~~~-~G~~~~-i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 284 DASGKVTGVLVKGE-YTGYYV-IKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp C--CCEEEEEEEET-TTEEEE-EECSEEEECCCCCTTCHHHH
T ss_pred CCCCeEEEEEEEeC-CCcEEE-EEcCEEEEeCCCCccCHHHH
Confidence 66 54 344444 676556 99999999999999876655
No 62
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.14 E-value=1.4e-10 Score=114.50 Aligned_cols=45 Identities=11% Similarity=0.116 Sum_probs=39.9
Q ss_pred CeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 112 CNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 112 v~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
++|+++++|++|+.++++++|++. +|++ ++||.||.|.......+
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~-~g~~---~~ad~vi~a~p~~~~~~ 292 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELD-NGVT---LDADSVIVTAPHKAAAG 292 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEES-SSCE---EEESEEEECSCHHHHHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEEC-CCCE---EECCEEEECCCHHHHHH
Confidence 689999999999999889999998 8987 99999999998877443
No 63
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.13 E-value=2.4e-10 Score=116.91 Aligned_cols=156 Identities=15% Similarity=0.166 Sum_probs=85.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCcccccccCH-HH-----HHHHHHC-C-------
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDIRNSGLSEGKSINLALSV-RG-----REALRRI-G------- 68 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G--~~V~viE~~~~~~~~~~~~g~~i~~al~~-~~-----~~~l~~l-G------- 68 (379)
.++||+|||||++||++|+.|++.| .+|+||||.+.....+.....++...+.. .+ ...++.- +
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 3589999999999999999999999 99999999865432211111122111110 00 1111110 0
Q ss_pred ---------ChHHHHhCCCCceee---EE--EecCCcE-EEeeCCC-CCcH-------HHHhcCCCCeEEeCceEEEEEe
Q psy9141 69 ---------LEDKLLAHGIPMRAR---MI--HGQNGKL-REIPYDP-VHNQ-------VELEQYPDCNIYFQHKLINLDV 125 (379)
Q Consensus 69 ---------l~~~l~~~~~~~~~~---~~--~~~~g~~-~~~~~~~-~~~~-------~~~~~~~gv~i~~~~~v~~i~~ 125 (379)
..+.+...+.++... .+ ....+.. .+..+.. ..+. ..+.+..+++|++++.|+++..
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~ 163 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV 163 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE
Confidence 011222233332210 00 0000100 0000110 0011 2233333499999999999988
Q ss_pred cCCeE---EEEE-ccCCceeEEEeecEEEecCCCChHHHHH
Q psy9141 126 NSGNV---TFYR-TEDNSETKITDNQLIIGADGAYSGVRKC 162 (379)
Q Consensus 126 ~~~~v---~v~~-~~~G~~~~~i~adlVV~AdG~~S~vr~~ 162 (379)
+++.+ .+.. . +|+..+ +.|+.||.|+|.+|.++..
T Consensus 164 ~~g~v~Gv~~~~~~-~G~~~~-i~A~~VVlAtGg~s~~~~~ 202 (602)
T 1kf6_A 164 DDGHVRGLVAMNMM-EGTLVQ-IRANAVVMATGGAGRVYRY 202 (602)
T ss_dssp ETTEEEEEEEEETT-TTEEEE-EECSCEEECCCCCGGGSSS
T ss_pred eCCEEEEEEEEEcC-CCcEEE-EEcCeEEECCCCCcccccC
Confidence 77743 3332 4 787555 9999999999999988644
No 64
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.13 E-value=2.6e-10 Score=114.46 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=35.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRN 43 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~ 43 (379)
++||+|||||++||++|+.|++.|.+|+||||.+....
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 47999999999999999999999999999999987653
No 65
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=109.31 Aligned_cols=140 Identities=14% Similarity=0.271 Sum_probs=79.4
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCcEEEEccCCCCCCCCC------CCCcccc-----cccCH----HHHHHHHH--
Q psy9141 7 KSVVIVGGGLVGSLSACMFAK---NQYEVNLYEAREDIRNSGL------SEGKSIN-----LALSV----RGREALRR-- 66 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~---~G~~V~viE~~~~~~~~~~------~~g~~i~-----~al~~----~~~~~l~~-- 66 (379)
+||+|||||++|+++|+.|++ .|++|+|+||.+....... ..+.... +...+ ...+.++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 389999999999999999999 9999999999875432100 0000000 00011 11112211
Q ss_pred -CCChHHHHhCCCCceeeEEEecCCcEEEeeCCCCCcH--HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEE
Q psy9141 67 -IGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQ--VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKI 143 (379)
Q Consensus 67 -lGl~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~ 143 (379)
.|+.... .......... ++. ..+........ ..+.+..+++|+++++|++++.++++|++++. +|++
T Consensus 82 ~~g~~~~~---~~~~~~~~~~--~~~-~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~-~g~~--- 151 (342)
T 3qj4_A 82 AYGVLRPL---SSPIEGMVMK--EGD-CNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQ-TGSP--- 151 (342)
T ss_dssp HTTSCEEC---CSCEETCCC----CC-EEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEES-SSCC---
T ss_pred hCCCeecC---chhhcceecc--CCc-cceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEEC-CCCE---
Confidence 1211000 0000000000 111 11111111111 23333238999999999999999999999998 8887
Q ss_pred EeecEEEecCCCC
Q psy9141 144 TDNQLIIGADGAY 156 (379)
Q Consensus 144 i~adlVV~AdG~~ 156 (379)
+++|.||.|....
T Consensus 152 ~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 152 EQFDLIVLTMPVP 164 (342)
T ss_dssp EEESEEEECSCHH
T ss_pred EEcCEEEECCCHH
Confidence 8999999998743
No 66
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.11 E-value=1.9e-10 Score=116.76 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=85.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC-CCCCCCCCCCcccccccC-HHHHHHHHHCC-ChHHHHhC-CCCce
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE-DIRNSGLSEGKSINLALS-VRGREALRRIG-LEDKLLAH-GIPMR 81 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~-~~~~~~~~~g~~i~~al~-~~~~~~l~~lG-l~~~l~~~-~~~~~ 81 (379)
++||+|||||++|+.+|+.|++.|.+|+|||+.. .....+ + ...+. .+. ....+.++.+| .+...... +..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~-C-nps~G-Gia~g~lv~eldalgg~~~~~~d~~gi~-- 101 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS-C-NPAIG-GIAKGIVVREIDALGGEMGKAIDQTGIQ-- 101 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC-S-CSEEE-CTTHHHHHHHHHHHTCSHHHHHHHHEEE--
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC-c-ccccc-ccchHHHHHHHHHhhhHHHHHhhhcccc--
Confidence 5899999999999999999999999999999984 222111 1 11110 111 22334455554 34433221 111
Q ss_pred eeEEEec-CCcE-EEe--eCCCC-CcH---HHHhcCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEec
Q psy9141 82 ARMIHGQ-NGKL-REI--PYDPV-HNQ---VELEQYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGA 152 (379)
Q Consensus 82 ~~~~~~~-~g~~-~~~--~~~~~-~~~---~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~A 152 (379)
+...+. .+.. ... ..+.. ..+ ..+.+.+|++| ++++|+++..+++.+. |.+. +|.+ +.||.||.|
T Consensus 102 -f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~-dG~~---i~AdaVVLA 175 (637)
T 2zxi_A 102 -FKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTN-LGVE---YKTKAVVVT 175 (637)
T ss_dssp -EEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEET-TSCE---EECSEEEEC
T ss_pred -eeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEEC-CCcE---EEeCEEEEc
Confidence 111111 1110 000 00000 001 23344479999 5679999988777664 7777 8876 999999999
Q ss_pred CCCChHHHH
Q psy9141 153 DGAYSGVRK 161 (379)
Q Consensus 153 dG~~S~vr~ 161 (379)
+|.+|..+.
T Consensus 176 TG~~s~~~~ 184 (637)
T 2zxi_A 176 TGTFLNGVI 184 (637)
T ss_dssp CTTCBTCEE
T ss_pred cCCCccCce
Confidence 999876543
No 67
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.10 E-value=4.7e-10 Score=104.70 Aligned_cols=106 Identities=12% Similarity=0.093 Sum_probs=73.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
.+||+||||||+|+++|+.|++.|++|+|||+. . |... . . . ...
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~-------gg~~--~--~-----------------~------~~~ 58 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P-------GGQL--T--E-----------------A------GIV 58 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T-------TGGG--G--G-----------------C------CEE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C-------CCee--c--c-----------------c------ccc
Confidence 479999999999999999999999999999987 2 2111 0 0 0 000
Q ss_pred EecCCcEEEeeCCCCCcH------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 86 HGQNGKLREIPYDPVHNQ------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+...+ +...... .......++++++ ++|++++.+++.+.+.+. +|.+ +.+|.||.|+|..+.
T Consensus 59 ~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~-~g~~---~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 59 DDYLG------LIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTK-RKGE---FKADSVILGIGVKRR 126 (323)
T ss_dssp CCSTT------STTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEES-SSCE---EEEEEEEECCCCEEC
T ss_pred cccCC------CCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEEC-CCCE---EEcCEEEECcCCCCc
Confidence 00000 0000000 2333446899999 899999998888889888 8777 999999999998853
No 68
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.10 E-value=1.6e-10 Score=110.41 Aligned_cols=123 Identities=14% Similarity=0.172 Sum_probs=79.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
|..+||+||||||+|+++|+.|++.|++|+|||+.+... |. |... .+..
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g------g~-------------------~~~~----~~~~-- 60 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG------GQ-------------------LAAL----YPEK-- 60 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC------HH-------------------HHHT----CTTS--
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC------Cc-------------------cccc----CCCc--
Confidence 346899999999999999999999999999999986442 11 0000 0000
Q ss_pred EEEecCCcEEEeeCCCCCcH-HHHhcCCCCeEEeCceEEEEEecCC-eEEEEEccCCceeEEEeecEEEecCCCChHHHH
Q psy9141 84 MIHGQNGKLREIPYDPVHNQ-VELEQYPDCNIYFQHKLINLDVNSG-NVTFYRTEDNSETKITDNQLIIGADGAYSGVRK 161 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~-~~~~~~~gv~i~~~~~v~~i~~~~~-~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr~ 161 (379)
.+++..+.. .......... .......+++++++++|++++.+++ .+++++. +|++ +++|.||.|+|.+|..++
T Consensus 61 ~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~-~g~~---~~~~~li~AtG~~~~~~~ 135 (360)
T 3ab1_A 61 HIYDVAGFP-EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTN-TGNV---YRSRAVLIAAGLGAFEPR 135 (360)
T ss_dssp EECCSTTCS-SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEET-TSCE---EEEEEEEECCTTCSCCBC
T ss_pred ccccCCCCC-CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEEC-CCcE---EEeeEEEEccCCCcCCCC
Confidence 011100000 0000000000 2223345799999999999998765 7888888 8876 999999999999875544
Q ss_pred H
Q psy9141 162 C 162 (379)
Q Consensus 162 ~ 162 (379)
.
T Consensus 136 ~ 136 (360)
T 3ab1_A 136 K 136 (360)
T ss_dssp C
T ss_pred C
Confidence 3
No 69
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.09 E-value=3.1e-10 Score=115.53 Aligned_cols=145 Identities=17% Similarity=0.209 Sum_probs=83.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC-CCCCCCCCCccccccc-CHHHHHHHHHCC-ChHHHHhC-CCCc
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED-IRNSGLSEGKSINLAL-SVRGREALRRIG-LEDKLLAH-GIPM 80 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~-~~~~~~~~g~~i~~al-~~~~~~~l~~lG-l~~~l~~~-~~~~ 80 (379)
.++||+|||||++|+++|+.|++.|.+|+|+|+.+. ....+ + ...+. .+ .....+.++.++ +....... +..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~-c-~ps~g-Gia~~~lv~el~al~g~~~~~~d~~gi~- 95 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMS-C-NPAIG-GVAKGQITREIDALGGEMGKAIDATGIQ- 95 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS-S-CSEEE-CHHHHHHHHHHHHHTCSHHHHHHHHEEE-
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCc-c-ccchh-hhhHHHHHHHHHhcccHHHHHHHhcCCc-
Confidence 468999999999999999999999999999999852 22111 1 11110 00 011222233332 22222111 111
Q ss_pred eeeEEEec-CCcE---EEeeCCCC-CcH---HHHhcCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEe
Q psy9141 81 RARMIHGQ-NGKL---REIPYDPV-HNQ---VELEQYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIG 151 (379)
Q Consensus 81 ~~~~~~~~-~g~~---~~~~~~~~-~~~---~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~ 151 (379)
+...+. .+.. .....+.. ..+ ..+.+.+|++++. .+|+++..+++.+. |.+. +|.+ ++||.||.
T Consensus 96 --f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~-~G~~---i~Ad~VVL 168 (641)
T 3cp8_A 96 --FRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVR-SGRA---IQAKAAIL 168 (641)
T ss_dssp --EEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEET-TSCE---EEEEEEEE
T ss_pred --hhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEEC-CCcE---EEeCEEEE
Confidence 111111 1100 00000000 001 3344447999964 58999988888877 7777 8876 99999999
Q ss_pred cCCCChHHH
Q psy9141 152 ADGAYSGVR 160 (379)
Q Consensus 152 AdG~~S~vr 160 (379)
|+|.++..+
T Consensus 169 ATG~~s~~~ 177 (641)
T 3cp8_A 169 ACGTFLNGL 177 (641)
T ss_dssp CCTTCBTCE
T ss_pred CcCCCCCcc
Confidence 999997643
No 70
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.08 E-value=1.2e-09 Score=111.29 Aligned_cols=37 Identities=16% Similarity=0.176 Sum_probs=34.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.++||+|||||++||++|+.|++.|.+|+|+||.+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3589999999999999999999999999999998755
No 71
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.08 E-value=1.6e-10 Score=113.83 Aligned_cols=35 Identities=26% Similarity=0.285 Sum_probs=33.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCC-CcEEEEccC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQ-YEVNLYEAR 38 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G-~~V~viE~~ 38 (379)
|+++||+|||||++|+++|+.|+++| .+|+|||+.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 66789999999999999999999999 999999993
No 72
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.08 E-value=5.5e-10 Score=104.19 Aligned_cols=36 Identities=11% Similarity=0.338 Sum_probs=32.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|++|||+||||||+|+++|+.|+|.|++|+|||+..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 789999999999999999999999999999999864
No 73
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.08 E-value=1.4e-09 Score=111.31 Aligned_cols=152 Identities=14% Similarity=0.123 Sum_probs=85.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccC---HHHH-----HHHHHC-C--------
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALS---VRGR-----EALRRI-G-------- 68 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~---~~~~-----~~l~~l-G-------- 68 (379)
++||+|||||++||++|+.|++.|.+|+||||.+.....+...+.++...+. ..+. ..++.- +
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~ 97 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIH 97 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 4799999999999999999999999999999987543222111222211111 0111 111110 0
Q ss_pred --------ChHHHHhCCCCcee-----eEEEecCCcEE---------EeeCC-CCCcH------HHHhcCCCCeEEeCce
Q psy9141 69 --------LEDKLLAHGIPMRA-----RMIHGQNGKLR---------EIPYD-PVHNQ------VELEQYPDCNIYFQHK 119 (379)
Q Consensus 69 --------l~~~l~~~~~~~~~-----~~~~~~~g~~~---------~~~~~-~~~~~------~~~~~~~gv~i~~~~~ 119 (379)
..+.+...+.++.. +......+... +..+. ...++ .......+++|+.++.
T Consensus 98 ~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~~ 177 (621)
T 2h88_A 98 YMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYF 177 (621)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEceE
Confidence 11122233433321 00000111100 00011 00111 2223347999999999
Q ss_pred EEEEEecCCeEE---EEE-ccCCceeEEEeecEEEecCCCChHH
Q psy9141 120 LINLDVNSGNVT---FYR-TEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 120 v~~i~~~~~~v~---v~~-~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
|+++..+++.+. +.. . +|+..+ +.|+.||.|+|.+|.+
T Consensus 178 v~~Li~~~g~v~Gv~~~~~~-~G~~~~-i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 178 ALDLLMENGECRGVIALCIE-DGTIHR-FRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEEEEEETTEEEEEEEEETT-TCCEEE-EEEEEEEECCCCCGGG
T ss_pred EEEEEEECCEEEEEEEEEcC-CCcEEE-EEcCeEEECCCccccc
Confidence 999987766543 333 4 777556 9999999999999864
No 74
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.08 E-value=5.3e-10 Score=103.21 Aligned_cols=105 Identities=20% Similarity=0.256 Sum_probs=73.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
+||+||||||+|+++|..|++.|++|+|+|+.+.....+ ... ...+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~---~~~------------------------~~~~------- 48 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFA---SHS------------------------HGFL------- 48 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGC---SCC------------------------CSST-------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccc---hhh------------------------cCCc-------
Confidence 799999999999999999999999999999875221000 000 0000
Q ss_pred ecCCcEEEeeCCCCCcH-------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQ-------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
+ +...... ..+.+.++++++.+ +|++++.+++++.+.+. +|++ +++|.||.|+|..+..
T Consensus 49 ---~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~v~~~-~g~~---~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 49 ---G------QDGKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKGSFGEFIVEID-GGRR---ETAGRLILAMGVTDEL 114 (297)
T ss_dssp ---T------CTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEEETTEEEEEET-TSCE---EEEEEEEECCCCEEEC
T ss_pred ---C------CCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCeEEEEEC-CCCE---EEcCEEEECCCCCCCC
Confidence 0 0000000 23334447777654 89999998888999998 8887 9999999999997643
No 75
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.07 E-value=2.9e-10 Score=106.89 Aligned_cols=142 Identities=15% Similarity=0.223 Sum_probs=84.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCccc-ccccCHHHHHHHHHCCChHHHHhCCCCcee
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSI-NLALSVRGREALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i-~~al~~~~~~~l~~lGl~~~l~~~~~~~~~ 82 (379)
++||+||||||+|+++|+.|++. |++|+|+|+.+.+.......+... ...+.+...+.|+.+|+.- ..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~---------~~ 135 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY---------ED 135 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCC---------EE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccc---------cc
Confidence 46999999999999999999998 999999999886642211111100 0112344566666666421 10
Q ss_pred eEEEecCCcEEEeeCCCCCcH---HHHhcCCCCeEEeCceEEEEEecC----C--eEE-EEEc-----cCC------cee
Q psy9141 83 RMIHGQNGKLREIPYDPVHNQ---VELEQYPDCNIYFQHKLINLDVNS----G--NVT-FYRT-----EDN------SET 141 (379)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~~---~~~~~~~gv~i~~~~~v~~i~~~~----~--~v~-v~~~-----~~G------~~~ 141 (379)
.+............. ..+.+.++++++.+++|+++..++ + .+. +... .+| +..
T Consensus 136 ------~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~ 209 (326)
T 2gjc_A 136 ------EGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPN 209 (326)
T ss_dssp ------CSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCE
T ss_pred ------CCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCce
Confidence 011111000000001 344455799999999999998763 3 332 2210 122 223
Q ss_pred EEEee---------------cEEEecCCCChHHHHHh
Q psy9141 142 KITDN---------------QLIIGADGAYSGVRKCL 163 (379)
Q Consensus 142 ~~i~a---------------dlVV~AdG~~S~vr~~l 163 (379)
+ +.| ++||+|+|..|.+.+++
T Consensus 210 ~-I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 210 V-IELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp E-EEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred E-EEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 4 899 99999999999877766
No 76
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.04 E-value=8.5e-10 Score=112.16 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=34.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
..+||+|||||++|+++|+.|+++|++|+|+|+.+...
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~ 68 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAE 68 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 35899999999999999999999999999999987554
No 77
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.03 E-value=8.8e-10 Score=111.26 Aligned_cols=133 Identities=11% Similarity=0.100 Sum_probs=77.3
Q ss_pred CCCcEEEECCChHHHHHHHHHH-hCCCcEEEEccCCCCCCCC---CCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFA-KNQYEVNLYEAREDIRNSG---LSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La-~~G~~V~viE~~~~~~~~~---~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
.++||+|||||++|+++|..|+ +.|++|+|||+.+...... .+.|.... +.. .+......+.+... ...
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d--~~s----~~~~~~~~~~~~~~-~~~ 79 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSD--TES----HLYRFSFDRDLLQE-STW 79 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEE--EEG----GGSSCCSCHHHHHH-CCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceec--CCc----ceeeeccccccccC-CCC
Confidence 4589999999999999999999 9999999999987543110 00000000 000 00000000000000 000
Q ss_pred eeeEEEecCCcEEEeeCCCCCcH-HHHhcCCCC--eEEeCceEEEEEecCC--eEEEEEccCCceeEEEeecEEEecCCC
Q psy9141 81 RARMIHGQNGKLREIPYDPVHNQ-VELEQYPDC--NIYFQHKLINLDVNSG--NVTFYRTEDNSETKITDNQLIIGADGA 155 (379)
Q Consensus 81 ~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~gv--~i~~~~~v~~i~~~~~--~v~v~~~~~G~~~~~i~adlVV~AdG~ 155 (379)
... . ......... ....+..++ .++++++|++++.+++ .++|++. +|++ ++||.||.|+|.
T Consensus 80 --------~~~-~-~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~-~G~~---i~ad~lV~AtG~ 145 (540)
T 3gwf_A 80 --------KTT-Y-ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTD-HGEV---YRAKYVVNAVGL 145 (540)
T ss_dssp --------SBS-E-EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEET-TSCE---EEEEEEEECCCS
T ss_pred --------ccc-C-CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEc-CCCE---EEeCEEEECCcc
Confidence 000 0 000000000 222333466 8999999999988765 7889998 8987 999999999998
Q ss_pred ChH
Q psy9141 156 YSG 158 (379)
Q Consensus 156 ~S~ 158 (379)
+|.
T Consensus 146 ~s~ 148 (540)
T 3gwf_A 146 LSA 148 (540)
T ss_dssp CCS
T ss_pred ccc
Confidence 774
No 78
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.02 E-value=9.2e-10 Score=109.12 Aligned_cols=72 Identities=21% Similarity=0.256 Sum_probs=48.1
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCC---CCCC------cccccccCHHHHHHHHHCCChH
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSG---LSEG------KSINLALSVRGREALRRIGLED 71 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~---~~~g------~~i~~al~~~~~~~l~~lGl~~ 71 (379)
|+...++||+|||||++||++|+.|++.|++|+|+|+.+...... ..+| ..+-..-.+...++++++|+.+
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~ 90 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEG 90 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGG
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCcc
Confidence 333456899999999999999999999999999999998654210 0011 1110011467889999999854
Q ss_pred H
Q psy9141 72 K 72 (379)
Q Consensus 72 ~ 72 (379)
.
T Consensus 91 ~ 91 (478)
T 2ivd_A 91 R 91 (478)
T ss_dssp G
T ss_pred e
Confidence 3
No 79
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.02 E-value=5.3e-10 Score=104.91 Aligned_cols=117 Identities=19% Similarity=0.249 Sum_probs=76.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
+..+||+||||||+|+++|+.|++.|++|+|||+.+... |. |.... +. .
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g------G~-------------------~~~~~----~~--~ 53 (332)
T 3lzw_A 5 TKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG------GQ-------------------LSALY----PE--K 53 (332)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC------HH-------------------HHHHC----TT--S
T ss_pred CccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC------ce-------------------ehhcC----CC--c
Confidence 345799999999999999999999999999999987542 11 00000 00 0
Q ss_pred EEEecCCcEEEeeCCCCCcH-HHHhcCCCCeEEeCceEEEEEecCC-eEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 84 MIHGQNGKLREIPYDPVHNQ-VELEQYPDCNIYFQHKLINLDVNSG-NVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~-~~~~~~~gv~i~~~~~v~~i~~~~~-~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
.+++..+... ......... .......+++++++++|++++.+++ .+.+.+. +|+ +.+|.||.|+|.+|
T Consensus 54 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~-~g~----~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 54 YIYDVAGFPK-IRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTN-EET----HYSKTVIITAGNGA 123 (332)
T ss_dssp EECCSTTCSS-EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEES-SEE----EEEEEEEECCTTSC
T ss_pred eEeccCCCCC-CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEEC-CCE----EEeCEEEECCCCCc
Confidence 0111111000 000000000 2333445899999999999998876 7888887 764 88999999999955
No 80
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.01 E-value=1.9e-09 Score=107.07 Aligned_cols=147 Identities=16% Similarity=0.214 Sum_probs=79.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCH----H--HHHHHHH-C-------------
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSV----R--GREALRR-I------------- 67 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~----~--~~~~l~~-l------------- 67 (379)
||+|||||++|+++|+.|++.|.+|+|+||. .....+...+.++...+.+ . ....++. -
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 3322211112222111211 0 0001100 0
Q ss_pred ---CChHHHHhCCCCceeeEEEecCCcE--EEeeCCCCCcH-------HHHhcCCCCeEEeCceEEEEEecCCeEE-EEE
Q psy9141 68 ---GLEDKLLAHGIPMRARMIHGQNGKL--REIPYDPVHNQ-------VELEQYPDCNIYFQHKLINLDVNSGNVT-FYR 134 (379)
Q Consensus 68 ---Gl~~~l~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~-------~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~ 134 (379)
...+.+...+.++... .....+.. .........+. ..+ +..+++++.+++| ++..+++.+. +..
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~-~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~-~~~gv~i~~~~~v-~l~~~~~~v~Gv~v 156 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEED-LRLEGGHTKRRVLHRTDETGREIFNFLLKLA-REEGIPIIEDRLV-EIRVKDGKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSS-CBCCTTCSSCCEECSSSCHHHHHHHHHHHHH-HHTTCCEECCCEE-EEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcc-cccccCcCcCcEEEeCCCCHHHHHHHHHHHH-HhCCCEEEECcEE-EEEEeCCEEEEEEE
Confidence 0112222233333210 00001110 00111111111 222 4469999999999 9987777653 333
Q ss_pred ccCCceeEEEeecEEEecCCCChHHHH
Q psy9141 135 TEDNSETKITDNQLIIGADGAYSGVRK 161 (379)
Q Consensus 135 ~~~G~~~~~i~adlVV~AdG~~S~vr~ 161 (379)
..++.+ +.||.||.|+|.+|.+..
T Consensus 157 ~~~~g~---~~a~~VVlAtGg~~~~~~ 180 (472)
T 2e5v_A 157 EKRGLV---EDVDKLVLATGGYSYLYE 180 (472)
T ss_dssp TTTEEE---CCCSEEEECCCCCGGGSS
T ss_pred EeCCCe---EEeeeEEECCCCCcccCc
Confidence 212223 789999999999998764
No 81
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.01 E-value=2.2e-09 Score=110.67 Aligned_cols=40 Identities=20% Similarity=0.221 Sum_probs=35.7
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
|+ +.++||+|||||++||++|+.|++.|.+|+||||.+..
T Consensus 1 M~-~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 1 MK-VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp CC-EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred CC-cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 44 34689999999999999999999999999999998754
No 82
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.99 E-value=2.3e-09 Score=99.89 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=74.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
+||+||||||+|+++|+.|++.|+ +|+|+|+.. .. |... .. ... ...+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~g------g~~~---~~----------~~~-----~~~~------ 50 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PG------GQIT---GS----------SEI-----ENYP------ 50 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TT------CGGG---GC----------SCB-----CCST------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CC------cccc---cc----------ccc-----ccCC------
Confidence 699999999999999999999999 999999852 11 2110 00 000 0000
Q ss_pred EecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 86 HGQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
+ ++....... .......++++++ ++|++++.+++.+++.+. +|++ +++|.||.|+|.++...
T Consensus 51 ----~----~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~-~g~~---~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 51 ----G----VKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAE-DGKT---FEAKSVIIATGGSPKRT 117 (311)
T ss_dssp ----T----CCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEET-TSCE---EEEEEEEECCCEEECCC
T ss_pred ----C----CcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEc-CCCE---EECCEEEECCCCCCCCC
Confidence 0 000000000 2223345899988 789999988888888887 8876 99999999999877543
No 83
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.97 E-value=9.4e-10 Score=105.01 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=76.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCcee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~ 82 (379)
|+++||+||||||+|+++|..|++.|+ +|+|||+.+ ............. .+.+.. ....+|+.+ + ...
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~-~~~~~~--~~~~~g~~~-~---~~~--- 70 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTR-TITPSF--TSNGFGMPD-M---NAI--- 70 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCB-CSSCCC--CCGGGTCCC-T---TCS---
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccccc-ccCcch--hcccCCchh-h---hhc---
Confidence 446899999999999999999999999 999999986 3110000000000 000000 000001100 0 000
Q ss_pred eEEEecCC-cEEEeeCCCCCcH------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCC
Q psy9141 83 RMIHGQNG-KLREIPYDPVHNQ------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGA 155 (379)
Q Consensus 83 ~~~~~~~g-~~~~~~~~~~~~~------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~ 155 (379)
.... ............. ....+..+++++++++|++++.+++++++.+. +| + +.+|.||.|+|.
T Consensus 71 ----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~-~g-~---~~~d~vVlAtG~ 141 (369)
T 3d1c_A 71 ----SMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATT-TE-T---YHADYIFVATGD 141 (369)
T ss_dssp ----STTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEES-SC-C---EEEEEEEECCCS
T ss_pred ----cccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeC-CC-E---EEeCEEEECCCC
Confidence 0000 0000000011111 22333468999999999999988778888877 66 4 899999999999
Q ss_pred ChH
Q psy9141 156 YSG 158 (379)
Q Consensus 156 ~S~ 158 (379)
++.
T Consensus 142 ~~~ 144 (369)
T 3d1c_A 142 YNF 144 (369)
T ss_dssp TTS
T ss_pred CCc
Confidence 863
No 84
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.95 E-value=2.1e-09 Score=100.96 Aligned_cols=110 Identities=21% Similarity=0.201 Sum_probs=71.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
..+||+||||||+|+++|..|++.|++|+|||+.. .. |... .. +.. ...+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g------g~~~---~~----------~~~-----~~~~----- 56 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PG------GQIA---WS----------EEV-----ENFP----- 56 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TT------GGGG---GC----------SCB-----CCST-----
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CC------cccc---cc----------ccc-----ccCC-----
Confidence 35899999999999999999999999999999982 21 2110 00 000 0000
Q ss_pred EEecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEec--CCe-EEEEEccCCceeEEEeecEEEecCCCC
Q psy9141 85 IHGQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVN--SGN-VTFYRTEDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~--~~~-v~v~~~~~G~~~~~i~adlVV~AdG~~ 156 (379)
+ ++....... ....+..+++++. .+|++++.+ ++. +++.+. +|++ +++|.||.|+|..
T Consensus 57 -----~----~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~-~g~~---~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 57 -----G----FPEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRG-YNGE---YRAKAVILATGAD 122 (325)
T ss_dssp -----T----CSSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEE-SSCE---EEEEEEEECCCEE
T ss_pred -----C----CCCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEEC-CCCE---EEeCEEEECcCCC
Confidence 0 000000000 1222335889887 589999876 443 677777 8876 9999999999987
Q ss_pred hH
Q psy9141 157 SG 158 (379)
Q Consensus 157 S~ 158 (379)
+.
T Consensus 123 ~~ 124 (325)
T 2q7v_A 123 PR 124 (325)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 85
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.95 E-value=5.9e-09 Score=104.61 Aligned_cols=44 Identities=16% Similarity=0.188 Sum_probs=39.5
Q ss_pred CCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 111 DCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 111 gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+++|+++++|++|+.+++++++++. +|++ ++||.||.|.+....
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~~~-~g~~---~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVETL-NHEM---YEAKYVISAIPPTLG 269 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEEET-TSCE---EEESEEEECSCGGGG
T ss_pred CCcEEcCCeeEEEEECCCeEEEEEC-CCeE---EEeCEEEECCCHHHH
Confidence 6789999999999998888999888 8877 999999999998863
No 86
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.94 E-value=2.6e-09 Score=100.39 Aligned_cols=113 Identities=20% Similarity=0.257 Sum_probs=74.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
.+||+||||||+|+++|+.|++.|++|+|||+.+..... . |..+. ... .+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~--~-gg~~~--~~~-------------------------~~ 71 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIA--A-GGQLT--TTT-------------------------EI 71 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBC--T-TCGGG--GSS-------------------------EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCC--c-Ccccc--cch-------------------------hh
Confidence 479999999999999999999999999999997622111 1 11110 000 00
Q ss_pred EecCCcEEEeeCCCCC-c-H-----HHHhcCCCCeEEeCceEEEEEecCCeEEEEEc--cCCceeEEEeecEEEecCCCC
Q psy9141 86 HGQNGKLREIPYDPVH-N-Q-----VELEQYPDCNIYFQHKLINLDVNSGNVTFYRT--EDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~-~-~-----~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~--~~G~~~~~i~adlVV~AdG~~ 156 (379)
....+ +.... . . .......++++++++ |++++.+++.+++.+. .++.+ +.+|.||.|+|..
T Consensus 72 ~~~~~------~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~---~~~d~vvlAtG~~ 141 (338)
T 3itj_A 72 ENFPG------FPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEP---VTTDAIILATGAS 141 (338)
T ss_dssp CCSTT------CTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCC---EEEEEEEECCCEE
T ss_pred cccCC------CcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcE---EEeCEEEECcCCC
Confidence 00000 00000 0 0 222333589999998 9999998888888773 15555 8999999999987
Q ss_pred hH
Q psy9141 157 SG 158 (379)
Q Consensus 157 S~ 158 (379)
+.
T Consensus 142 ~~ 143 (338)
T 3itj_A 142 AK 143 (338)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 87
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.94 E-value=6.3e-09 Score=101.35 Aligned_cols=47 Identities=15% Similarity=0.193 Sum_probs=39.4
Q ss_pred CCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 109 YPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 109 ~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..|++|+++++|++|+.++++++ +++ +|++ ++||.||.|.|.+...+
T Consensus 208 ~~G~~i~~~~~V~~i~~~~~~~~gv~~--~g~~---~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 208 ANGGKIHTGQEVSKILIENGKAAGIIA--DDRI---HDADLVISNLGHAATAV 255 (425)
T ss_dssp HTTCEEECSCCEEEEEEETTEEEEEEE--TTEE---EECSEEEECSCHHHHHH
T ss_pred HcCCEEEECCceeEEEEECCEEEEEEE--CCEE---EECCEEEECCCHHHHHH
Confidence 35899999999999999888887 554 5666 99999999999987653
No 88
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.94 E-value=2e-09 Score=107.24 Aligned_cols=48 Identities=8% Similarity=0.095 Sum_probs=42.2
Q ss_pred CCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 109 YPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 109 ~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..|++++.+++|++++.+++++.+.+. +|++ +++|.||.|.|..+.+.
T Consensus 244 ~~Gv~i~~~~~V~~i~~~~~~v~v~~~-~g~~---i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 244 AKGISIIYEATVSQVQSTENCYNVVLT-NGQT---ICADRVMLATGRVPNTT 291 (484)
T ss_dssp HHTCEEESSCCEEEEEECSSSEEEEET-TSCE---EEESEEEECCCEEECCT
T ss_pred HCCCEEEeCCEEEEEEeeCCEEEEEEC-CCcE---EEcCEEEEeeCCCcCCC
Confidence 358999999999999998888888888 8876 99999999999987654
No 89
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.93 E-value=2.3e-09 Score=113.69 Aligned_cols=47 Identities=11% Similarity=0.223 Sum_probs=39.2
Q ss_pred cCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
+..|++|+.+++|++++.+++++. +.+. +| + ++||.||.|+|.+|..
T Consensus 162 ~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~-~G-~---i~Ad~VV~AaG~~s~~ 209 (830)
T 1pj5_A 162 ESAGVTYRGSTTVTGIEQSGGRVTGVQTA-DG-V---IPADIVVSCAGFWGAK 209 (830)
T ss_dssp HHTTCEEECSCCEEEEEEETTEEEEEEET-TE-E---EECSEEEECCGGGHHH
T ss_pred HHcCCEEECCceEEEEEEeCCEEEEEEEC-Cc-E---EECCEEEECCccchHH
Confidence 346899999999999998888764 6666 66 4 9999999999999953
No 90
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.93 E-value=7.7e-10 Score=99.18 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=34.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
+||+||||||+||++|+.|+++|++|+||||++.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 799999999999999999999999999999998664
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.93 E-value=5.8e-10 Score=112.72 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=77.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCC---CCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNS---GLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~---~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
+.++||+|||||++|+++|..|++.|++|+|||+.+..... ....|... -......... +... +.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~--d~~~~~y~~~--------f~~~--~~ 74 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRL--DTESYAYGYF--------ALKG--II 74 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBC--SSCHHHHCHH--------HHTT--SS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceee--cCchhhcccc--------cCcc--cc
Confidence 45689999999999999999999999999999998755311 00001000 0000000000 0000 00
Q ss_pred eeeEEEecCCcEEEeeCCCCCcH------HHHhcCCCC--eEEeCceEEEEEecC--CeEEEEEccCCceeEEEeecEEE
Q psy9141 81 RARMIHGQNGKLREIPYDPVHNQ------VELEQYPDC--NIYFQHKLINLDVNS--GNVTFYRTEDNSETKITDNQLII 150 (379)
Q Consensus 81 ~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~gv--~i~~~~~v~~i~~~~--~~v~v~~~~~G~~~~~i~adlVV 150 (379)
... .... .+ .... ....+..++ .++++++|++++.++ +.|+|++. +|++ ++||+||
T Consensus 75 ~~~---~~~~-----~~--~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~-~G~~---~~ad~lV 140 (545)
T 3uox_A 75 PEW---EWSE-----NF--ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLD-NEEV---VTCRFLI 140 (545)
T ss_dssp TTC---CCSB-----SS--CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEET-TTEE---EEEEEEE
T ss_pred cCC---Cccc-----cC--CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEEC-CCCE---EEeCEEE
Confidence 000 0000 00 0010 222222344 789999999998765 47889998 8987 9999999
Q ss_pred ecCCCChHHH
Q psy9141 151 GADGAYSGVR 160 (379)
Q Consensus 151 ~AdG~~S~vr 160 (379)
.|+|.+|.-+
T Consensus 141 ~AtG~~s~p~ 150 (545)
T 3uox_A 141 SATGPLSASR 150 (545)
T ss_dssp ECCCSCBC--
T ss_pred ECcCCCCCCc
Confidence 9999877433
No 92
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.93 E-value=3.9e-09 Score=104.57 Aligned_cols=70 Identities=30% Similarity=0.391 Sum_probs=50.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCC---CCCCC------cccccccCHHHHHHHHHCCChHH
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDIRNS---GLSEG------KSINLALSVRGREALRRIGLEDK 72 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G--~~V~viE~~~~~~~~---~~~~g------~~i~~al~~~~~~~l~~lGl~~~ 72 (379)
|+.+||+|||||++||++|+.|++.| ++|+|+|+++..... ....| ........+...++++++|+...
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~ 81 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEK 81 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGG
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcce
Confidence 44689999999999999999999999 999999998754321 01111 11111245678899999998654
Q ss_pred H
Q psy9141 73 L 73 (379)
Q Consensus 73 l 73 (379)
+
T Consensus 82 ~ 82 (475)
T 3lov_A 82 L 82 (475)
T ss_dssp E
T ss_pred E
Confidence 3
No 93
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.92 E-value=1.1e-09 Score=109.43 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=34.6
Q ss_pred CCcEEEECCChHHHHHHHHHHh-CCCcEEEEccCCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAK-NQYEVNLYEAREDIRN 43 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~-~G~~V~viE~~~~~~~ 43 (379)
++||+|||||++||++|+.|++ .|++|+|+|+++.++.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 4799999999999999999998 5999999999987753
No 94
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.92 E-value=2.9e-09 Score=107.68 Aligned_cols=129 Identities=16% Similarity=0.189 Sum_probs=77.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
.++||+|||||++|+++|..|++.|++|+|||+.+..... . ......|+...+...... ..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGt-------w---------~~~~ypg~~~dv~s~~y~---~~ 80 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGV-------W---------YWNRYPGARCDVESIDYS---YS 80 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH-------H---------HHCCCTTCBCSSCTTTSS---CC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCc-------c---------ccCCCCCceeCCCchhcc---cc
Confidence 3579999999999999999999999999999998754311 0 000000110000000000 00
Q ss_pred EEecCCcEEEeeCC--CCCcH------HHHhcCCCC--eEEeCceEEEEEecCC--eEEEEEccCCceeEEEeecEEEec
Q psy9141 85 IHGQNGKLREIPYD--PVHNQ------VELEQYPDC--NIYFQHKLINLDVNSG--NVTFYRTEDNSETKITDNQLIIGA 152 (379)
Q Consensus 85 ~~~~~g~~~~~~~~--~~~~~------~~~~~~~gv--~i~~~~~v~~i~~~~~--~v~v~~~~~G~~~~~i~adlVV~A 152 (379)
+.. .......+. ..... ....+..++ .++++++|++++.+++ .++|++. +|++ ++||+||.|
T Consensus 81 f~~--~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~-~G~~---i~ad~lV~A 154 (549)
T 4ap3_A 81 FSP--ELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD-RGDE---VSARFLVVA 154 (549)
T ss_dssp SCH--HHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEET-TCCE---EEEEEEEEC
T ss_pred ccc--ccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEEC-CCCE---EEeCEEEEC
Confidence 000 000000000 00011 222333455 7999999999987765 7889998 8987 999999999
Q ss_pred CCCChH
Q psy9141 153 DGAYSG 158 (379)
Q Consensus 153 dG~~S~ 158 (379)
+|.+|.
T Consensus 155 tG~~s~ 160 (549)
T 4ap3_A 155 AGPLSN 160 (549)
T ss_dssp CCSEEE
T ss_pred cCCCCC
Confidence 997763
No 95
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.91 E-value=7.6e-10 Score=109.61 Aligned_cols=136 Identities=15% Similarity=0.126 Sum_probs=82.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
+++||+||||||+|+++|..|++.|++|+|||+.. .. |...+.. ...+..++...++++.+...... .++.
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~g------G~~~~~g-~~psk~ll~~~~~~~~~~~~~~~-~g~~ 72 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WG------GVCLNVG-CIPSKALLRNAELVHIFTKDAKA-FGIS 72 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TT------HHHHHHS-HHHHHHHHHHHHHHHHHHHHTTT-TTEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CC------CcccccC-chhhHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 35899999999999999999999999999999972 21 2111000 02344555555555555411111 1111
Q ss_pred EEecCCcEEEeeCCCCCc----------H--HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEec
Q psy9141 85 IHGQNGKLREIPYDPVHN----------Q--VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGA 152 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~----------~--~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~A 152 (379)
. .. ..++..... + ....+..+++++.++.+. .+++.+++.+. +|+..+ +++|.||.|
T Consensus 73 --~-~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~-~G~~~~-~~~d~lViA 141 (464)
T 2a8x_A 73 --G-EV---TFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLN-DGGTES-VTFDNAIIA 141 (464)
T ss_dssp --E-CC---EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEET-TSCCEE-EEEEEEEEC
T ss_pred --C-CC---ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeC-CCceEE-EEcCEEEEC
Confidence 1 11 111110000 0 122233689999887653 45677888887 783223 999999999
Q ss_pred CCCChHHH
Q psy9141 153 DGAYSGVR 160 (379)
Q Consensus 153 dG~~S~vr 160 (379)
+|..+...
T Consensus 142 tG~~~~~~ 149 (464)
T 2a8x_A 142 TGSSTRLV 149 (464)
T ss_dssp CCEEECCC
T ss_pred CCCCCCCC
Confidence 99987543
No 96
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.91 E-value=6.9e-09 Score=103.48 Aligned_cols=51 Identities=10% Similarity=0.079 Sum_probs=40.4
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEcc--CCceeEEEeecEEEecCCCChHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTE--DNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~--~G~~~~~i~adlVV~AdG~~S~v 159 (379)
+..|++++.+++|++++.+++++.+.+.+ +|+..+ +++|.||.|.|....+
T Consensus 250 ~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 250 TKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATT-LDAEVVLIATGRKPST 302 (491)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEE-EEESEEEECCCCEECC
T ss_pred HhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEE-EEcCEEEEeeCCccCC
Confidence 34699999999999999988887777651 264334 9999999999998654
No 97
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.91 E-value=6.7e-09 Score=101.25 Aligned_cols=47 Identities=17% Similarity=0.311 Sum_probs=39.6
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
+..|++|+++++|++|+.+++++ + .. +|++ ++||.||.|.|.+...+
T Consensus 200 ~~~G~~i~~~~~V~~i~~~~~~v-V-~~-~g~~---~~ad~Vv~a~~~~~~~~ 246 (421)
T 3nrn_A 200 MENKGKILTRKEVVEINIEEKKV-Y-TR-DNEE---YSFDVAISNVGVRETVK 246 (421)
T ss_dssp HTTTCEEESSCCEEEEETTTTEE-E-ET-TCCE---EECSEEEECSCHHHHHH
T ss_pred HHCCCEEEcCCeEEEEEEECCEE-E-Ee-CCcE---EEeCEEEECCCHHHHHH
Confidence 44689999999999999988888 5 45 7776 99999999999987553
No 98
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.90 E-value=3.4e-09 Score=107.07 Aligned_cols=129 Identities=13% Similarity=0.153 Sum_probs=76.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCC---CCCCcccccccCHHHHHHHHHCCChHHHHhCCCCce
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSG---LSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMR 81 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~---~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~ 81 (379)
.++||+|||||++|+++|+.|++.|++|+|||+.+...... ...+... ...+ .+..+...+.+...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~----d~~~--~~~~~~f~~~~~~~----- 83 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARC----DIES--IEYCYSFSEEVLQE----- 83 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBC----SSCT--TTSSCCSCHHHHHH-----
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceee----cccc--cccccccChhhhhc-----
Confidence 35799999999999999999999999999999987553110 0000000 0000 00000000000000
Q ss_pred eeEEEecCCcEEEeeCCCCCcH------HH-HhcC-CCCeEEeCceEEEEEecCC--eEEEEEccCCceeEEEeecEEEe
Q psy9141 82 ARMIHGQNGKLREIPYDPVHNQ------VE-LEQY-PDCNIYFQHKLINLDVNSG--NVTFYRTEDNSETKITDNQLIIG 151 (379)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~~------~~-~~~~-~gv~i~~~~~v~~i~~~~~--~v~v~~~~~G~~~~~i~adlVV~ 151 (379)
. ... ....... .. ..+. .+.+++++++|++++.+++ .++|++. +|++ ++||+||.
T Consensus 84 -~---~~~-------~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~-~G~~---~~ad~vV~ 148 (542)
T 1w4x_A 84 -W---NWT-------ERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTN-HGDR---IRARYLIM 148 (542)
T ss_dssp -C---CCC-------BSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEET-TCCE---EEEEEEEE
T ss_pred -c---Ccc-------cccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEEC-CCCE---EEeCEEEE
Confidence 0 000 0001011 11 1221 2467999999999987653 7889888 8876 99999999
Q ss_pred cCCCChHH
Q psy9141 152 ADGAYSGV 159 (379)
Q Consensus 152 AdG~~S~v 159 (379)
|+|.+|.-
T Consensus 149 AtG~~s~p 156 (542)
T 1w4x_A 149 ASGQLSVP 156 (542)
T ss_dssp CCCSCCCC
T ss_pred CcCCCCCC
Confidence 99998743
No 99
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.90 E-value=6.4e-09 Score=96.77 Aligned_cols=112 Identities=17% Similarity=0.128 Sum_probs=72.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
++||+||||||+|+++|..|++.|++|+|+|+.. . |... . ..++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~--g------G~~~----~--------~~~~---------------- 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF--G------GQIL----D--------TVDI---------------- 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST--T------GGGG----G--------CCEE----------------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC--C------ceec----c--------cccc----------------
Confidence 3799999999999999999999999999998531 1 2110 0 0000
Q ss_pred EecCCcEEEeeCCCCCcH-HHHhcCCCCeEEeCceEEEEEecC---CeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 86 HGQNGKLREIPYDPVHNQ-VELEQYPDCNIYFQHKLINLDVNS---GNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~-~~~~~~~gv~i~~~~~v~~i~~~~---~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
....+... ......... ....+..+++++.+++|+.++.+. +.+.+.+. +|++ +++|.||.|+|.++.
T Consensus 45 ~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~-~g~~---~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 45 ENYISVPK-TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETA-SGAV---LKARSIIVATGAKWR 116 (310)
T ss_dssp CCBTTBSS-EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEET-TSCE---EEEEEEEECCCEEEC
T ss_pred ccccCcCC-CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEEC-CCCE---EEeCEEEECcCCCcC
Confidence 00000000 000000000 223344689999999999997653 36888888 8876 999999999998764
No 100
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.89 E-value=2e-09 Score=101.34 Aligned_cols=120 Identities=16% Similarity=0.168 Sum_probs=72.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
|..+||+||||||+|+++|+.|++.|++|+|+|+...... .. |..+ ....
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~--~~-gg~~--~~~~------------------------- 55 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDI--AP-GGQL--TTTT------------------------- 55 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB--CT-TCGG--GGCS-------------------------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCcccc--CC-Ccee--eecc-------------------------
Confidence 3468999999999999999999999999999998311100 00 1111 0000
Q ss_pred EEEecCCcEEEeeCCCCCcH-HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 84 MIHGQNGKLREIPYDPVHNQ-VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~-~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
......+....+........ .......+++++.++ |++++.+++.+++++ +|.+ +++|.||.|+|.++..
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~--~~~~---~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 56 DVENFPGFPEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT--DSKA---ILADAVILAIGAVAKR 126 (333)
T ss_dssp EECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC--SSEE---EEEEEEEECCCEEECC
T ss_pred ccccCCCCccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE--CCcE---EEcCEEEECCCCCcCC
Confidence 00000000000000000000 222333589999987 999988877777765 5665 9999999999998753
No 101
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.89 E-value=2.5e-09 Score=99.72 Aligned_cols=120 Identities=18% Similarity=0.215 Sum_probs=70.0
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
|++ .|||+||||||||+++|+.|++.|++|+|+|+....... ..|. +...
T Consensus 1 M~~--~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~--~~G~-----~~~~--------------------- 50 (314)
T 4a5l_A 1 MSN--IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVA--AGGQ-----LTTT--------------------- 50 (314)
T ss_dssp -CC--CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCC--TTCG-----GGGS---------------------
T ss_pred CCC--CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcc--cCCC-----cCCh---------------------
Confidence 654 389999999999999999999999999999987532211 0111 1000
Q ss_pred eeeEEEecCCcEEEeeCCCCCcH-HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 81 RARMIHGQNGKLREIPYDPVHNQ-VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 81 ~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
..+++..+-...........+ .......++++.. ..+.....+.+...+.+. ++.+ +++|.||.|+|...
T Consensus 51 --~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~-~~~~---~~~~~liiATG~~~ 121 (314)
T 4a5l_A 51 --TIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT-ETIDHVDFSTQPFKLFTE-EGKE---VLTKSVIIATGATA 121 (314)
T ss_dssp --SEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC-CCEEEEECSSSSEEEEET-TCCE---EEEEEEEECCCEEE
T ss_pred --HHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE-eEEEEeecCCCceEEEEC-CCeE---EEEeEEEEcccccc
Confidence 001110000000000000000 1222334666654 456666666666777777 7777 99999999999754
No 102
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.88 E-value=3e-09 Score=99.44 Aligned_cols=110 Identities=23% Similarity=0.317 Sum_probs=72.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
|+.+||+||||||+|+++|+.|++.|++|+|+|+.. + |..+ .... .+ ...+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~-------gg~~--~~~~-------------~~--~~~~---- 53 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-K-------GGQL--TTTT-------------EV--ENWP---- 53 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-T-------TGGG--GGCS-------------BC--CCST----
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-C-------CceE--ecch-------------hh--hhCC----
Confidence 456899999999999999999999999999999642 1 1111 0000 00 0000
Q ss_pred EEEecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 84 MIHGQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+ ++....... .......+++++.++ +++++.+++.+++ +. +|.+ +.+|.||.|+|..+.
T Consensus 54 ------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~-~~~~---~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 54 ------G----DPNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NG-DNGE---YTCDALIIATGASAR 117 (320)
T ss_dssp ------T----CCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EE-SSCE---EEEEEEEECCCEEEC
T ss_pred ------C----CCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-Ee-CCCE---EEcCEEEECCCCCcC
Confidence 0 000000000 222333589999886 9999888888887 66 7776 999999999998764
No 103
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.88 E-value=8e-09 Score=100.85 Aligned_cols=44 Identities=18% Similarity=0.111 Sum_probs=38.3
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCC
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~ 156 (379)
+..+ +|+++++|++|+.++++++|++. +|++ ++||.||.|.|..
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~~v~v~~~-~g~~---~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGDVVNVTVK-DGHA---FQAHSVIVATPMN 258 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSSSEEEEET-TSCC---EEEEEEEECSCGG
T ss_pred hhCC-ceEeCCEEEEEEEcCCeEEEEEC-CCCE---EEeCEEEEecCcc
Confidence 3345 99999999999998889999998 8887 9999999999943
No 104
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.86 E-value=3e-08 Score=96.57 Aligned_cols=42 Identities=14% Similarity=0.344 Sum_probs=36.7
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCC-CcEEEEccCCCCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQ-YEVNLYEAREDIR 42 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G-~~V~viE~~~~~~ 42 (379)
|+.++++||+|||||++||++|+.|++.| ++|+|+|+++.+.
T Consensus 1 M~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp -CCCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 65456789999999999999999999999 9999999987653
No 105
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.85 E-value=6e-09 Score=103.25 Aligned_cols=147 Identities=12% Similarity=0.132 Sum_probs=76.3
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCc---EEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCc
Q psy9141 7 KSVVIVGGGLVGSLSACMFAK---NQYE---VNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPM 80 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~---~G~~---V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~ 80 (379)
+||+||||||+|+++|..|++ .|++ |+|||+.+............ ...+.+... ...+++.+... .+-
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~---g~~~~g~~~--~~~~y~~l~~~-~~~ 76 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRT---GLDENGEPV--HSSMYRYLWSN-GPK 76 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCC---SBCTTSSBC--CCCCCTTCBCS-SCG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCC---CccccCCCC--cCccccchhhc-CCh
Confidence 599999999999999999999 9999 99999987653221110000 000000000 00001000000 000
Q ss_pred eeeEEEecC--CcEEEeeCCCCCcH------HHHhcCCCCe--EEeCceEEEEEecCC--eEEEEEcc--CCceeEEEee
Q psy9141 81 RARMIHGQN--GKLREIPYDPVHNQ------VELEQYPDCN--IYFQHKLINLDVNSG--NVTFYRTE--DNSETKITDN 146 (379)
Q Consensus 81 ~~~~~~~~~--g~~~~~~~~~~~~~------~~~~~~~gv~--i~~~~~v~~i~~~~~--~v~v~~~~--~G~~~~~i~a 146 (379)
..+.+.+.. .............. ....+..+++ ++++++|++++.+++ .++|++.+ +|+..+ +.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~-~~~ 155 (464)
T 2xve_A 77 ECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYS-EEF 155 (464)
T ss_dssp GGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEE-EEE
T ss_pred hhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEE-EEc
Confidence 000000000 00000000011111 1222223676 999999999998766 77777651 254344 899
Q ss_pred cEEEecCCCChHHH
Q psy9141 147 QLIIGADGAYSGVR 160 (379)
Q Consensus 147 dlVV~AdG~~S~vr 160 (379)
|.||.|+|.+|.-+
T Consensus 156 d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 156 DYVVCCTGHFSTPY 169 (464)
T ss_dssp SEEEECCCSSSSBC
T ss_pred CEEEECCCCCCCCc
Confidence 99999999877543
No 106
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.84 E-value=1.3e-08 Score=95.34 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=71.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
++||+||||||+|+++|+.|++.|++|+|+|+.. .. |... ... .+ ...+ ..
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g------g~~~---~~~---------~~------~~~~--~~-- 66 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AG------GLTA---EAP---------LV------ENYL--GF-- 66 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TT------GGGG---GCS---------CB------CCBT--TB--
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CC------cccc---ccc---------hh------hhcC--CC--
Confidence 5899999999999999999999999999999853 21 2110 000 00 0000 00
Q ss_pred EecCCcEEEeeCCCCCcH-HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 86 HGQNGKLREIPYDPVHNQ-VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~-~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
....+. ..... .......++++++ .+|++++.+++.+++.+ +|.+ +.+|.||.|+|.++.
T Consensus 67 ~~~~~~-------~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~--~~~~---~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 67 KSIVGS-------ELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET--NDDT---YHAKYVIITTGTTHK 127 (319)
T ss_dssp SSBCHH-------HHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE--SSSE---EEEEEEEECCCEEEC
T ss_pred cccCHH-------HHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE--CCCE---EEeCEEEECCCCCcc
Confidence 000000 00000 2223345889888 78999998888777765 4555 899999999998764
No 107
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.84 E-value=2e-08 Score=100.03 Aligned_cols=45 Identities=7% Similarity=-0.071 Sum_probs=39.4
Q ss_pred CC-CeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 110 PD-CNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 110 ~g-v~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
.+ ++|+++++|++|+.++++++|++. +|++ ++||.||.|.|....
T Consensus 268 ~g~~~i~~~~~V~~i~~~~~~v~v~~~-~g~~---~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 268 TGRLGYVFGCPVRSVVNERDAARVTAR-DGRE---FVAKRVVCTIPLNVL 313 (495)
T ss_dssp TTCEEEESSCCEEEEEECSSSEEEEET-TCCE---EEEEEEEECCCGGGG
T ss_pred cCceEEEeCCEEEEEEEcCCEEEEEEC-CCCE---EEcCEEEECCCHHHH
Confidence 44 889999999999988888999888 8876 999999999997653
No 108
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.83 E-value=2.6e-08 Score=98.28 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=34.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC-----CcEEEEccCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQ-----YEVNLYEAREDIR 42 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G-----~~V~viE~~~~~~ 42 (379)
.+||+||||||+|+++|..|++.| ++|+|||+.+...
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 469999999999999999999999 9999999998654
No 109
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.82 E-value=1.9e-08 Score=98.02 Aligned_cols=48 Identities=13% Similarity=0.087 Sum_probs=41.0
Q ss_pred cCCCCeEEeCceEEEEEecCCeE-EEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNV-TFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v-~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
+..|++++++++|++++.+++++ .+++. +|++ ++||.||.|.|..+.+
T Consensus 205 ~~~GV~i~~~~~v~~i~~~~~~v~~v~l~-dG~~---i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 205 RAHGVDLRTGAAMDCIEGDGTKVTGVRMQ-DGSV---IPADIVIVGIGIVPCV 253 (415)
T ss_dssp HHTTCEEEETCCEEEEEESSSBEEEEEES-SSCE---EECSEEEECSCCEESC
T ss_pred HhCCCEEEECCEEEEEEecCCcEEEEEeC-CCCE---EEcCEEEECCCCccCh
Confidence 34699999999999999877666 57888 8987 9999999999998754
No 110
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.82 E-value=4.9e-09 Score=98.98 Aligned_cols=109 Identities=17% Similarity=0.268 Sum_probs=70.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
..+||+||||||+|+++|+.|++.|++|+|||+.. + |..+ ..... . ...+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~-------gg~~--~~~~~-------~--------~~~~----- 62 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-F-------GGAL--MTTTD-------V--------ENYP----- 62 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-C-------SCGG--GSCSC-------B--------CCST-----
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-C-------CCce--eccch-------h--------hhcC-----
Confidence 46899999999999999999999999999999652 1 1111 00000 0 0000
Q ss_pred EEecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEecCCeEEE-EEccCCceeEEEeecEEEecCCCChH
Q psy9141 85 IHGQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVNSGNVTF-YRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~~~~v~v-~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+ ++....... .......++++++++ +++++. ++.+++ .+. +|++ +++|.||.|+|..+.
T Consensus 63 -----~----~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~-~g~~---~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 63 -----G----FRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTA-DGQT---HRARAVILAMGAAAR 127 (335)
T ss_dssp -----T----CTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEET-TSCE---EEEEEEEECCCEEEC
T ss_pred -----C----CCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeC-CCCE---EEeCEEEECCCCCcc
Confidence 0 000000000 122233589999987 888887 555667 677 7876 999999999998764
No 111
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.81 E-value=6.9e-09 Score=106.94 Aligned_cols=38 Identities=18% Similarity=0.229 Sum_probs=34.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhC------CCcEEEEccCCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN------QYEVNLYEAREDIRN 43 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~------G~~V~viE~~~~~~~ 43 (379)
++||||||||++||++|+.|++. |.+|+||||......
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s 65 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERS 65 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCC
Confidence 58999999999999999999997 999999999876544
No 112
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.80 E-value=1.5e-08 Score=100.62 Aligned_cols=51 Identities=18% Similarity=0.135 Sum_probs=40.6
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCc-eeEEEeecEEEecCCCChHHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNS-ETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~-~~~~i~adlVV~AdG~~S~vr 160 (379)
+..|++++++++|++++.+++++.+.+. ++. ..+ +++|.||.|.|....+.
T Consensus 232 ~~~Gv~v~~~~~v~~i~~~~~~~~v~~~-~~~g~~~-~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 232 TKQGLKILLGARVTGTEVKNKQVTVKFV-DAEGEKS-QAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp HHTTEEEEETCEEEEEEECSSCEEEEEE-SSSEEEE-EEESEEEECSCEEECCT
T ss_pred HhCCCEEEECCEEEEEEEcCCEEEEEEE-eCCCcEE-EECCEEEEeeCCcccCC
Confidence 3468999999999999988888888776 541 234 99999999999887554
No 113
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.80 E-value=1.8e-08 Score=103.81 Aligned_cols=147 Identities=20% Similarity=0.239 Sum_probs=81.5
Q ss_pred CCcEEEECCChHHHHHHHHHH---h-CCCcEEEEccCCCCCCCCCCCCc-cccccc----------CHHH-HH-HHHH-C
Q psy9141 6 KKSVVIVGGGLVGSLSACMFA---K-NQYEVNLYEAREDIRNSGLSEGK-SINLAL----------SVRG-RE-ALRR-I 67 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La---~-~G~~V~viE~~~~~~~~~~~~g~-~i~~al----------~~~~-~~-~l~~-l 67 (379)
++||+|||||++||++|+.|+ + .|.+|+||||.+.........|. .++..+ ++.. .+ .+.. .
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 101 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMM 101 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHhc
Confidence 479999999999999999999 6 89999999999754322111121 111001 1110 01 1111 1
Q ss_pred CC----------------hHHHHhCCCCceeeEEEecCCcEEE-----eeCC-CCCcH---HHHhcCCCC-eEEeCceEE
Q psy9141 68 GL----------------EDKLLAHGIPMRARMIHGQNGKLRE-----IPYD-PVHNQ---VELEQYPDC-NIYFQHKLI 121 (379)
Q Consensus 68 Gl----------------~~~l~~~~~~~~~~~~~~~~g~~~~-----~~~~-~~~~~---~~~~~~~gv-~i~~~~~v~ 121 (379)
++ .+.+...+.++.. ..+|.... ..+. ....+ ..+.+.+|+ +|+.++.|+
T Consensus 102 ~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~----~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~ 177 (643)
T 1jnr_A 102 GLAREDLVADYARHVDGTVHLFEKWGLPIWK----TPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIF 177 (643)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTTCCBCB----CTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHcCCccee----CCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEE
Confidence 11 1122233433321 11221100 0000 00011 222222389 999999999
Q ss_pred EEEecCC---eEE-EE--E-ccCCceeEEEeecEEEecCCCChH
Q psy9141 122 NLDVNSG---NVT-FY--R-TEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 122 ~i~~~~~---~v~-v~--~-~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
++..+++ .+. +. . . +|+..+ +.|+.||.|+|.+|.
T Consensus 178 ~L~~~~~~~g~v~Gv~~~~~~-~g~~~~-i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 178 ELLKDNNDPNAVAGAVGFSVR-EPKFYV-FKAKAVILATGGATL 219 (643)
T ss_dssp EEEECTTCTTBEEEEEEEESS-SSCEEE-EECSEEEECCCCBCS
T ss_pred EEEEcCCccceeEEEEEEEec-CCcEEE-EEcCEEEECCCcccc
Confidence 9987765 543 22 2 4 676555 899999999999986
No 114
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.79 E-value=1.8e-08 Score=99.65 Aligned_cols=36 Identities=28% Similarity=0.564 Sum_probs=33.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--cEEEEccCCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY--EVNLYEAREDIR 42 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~~~~ 42 (379)
+||+|||||++||++|+.|+++|. +|+|+|+++...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 599999999999999999999999 999999987554
No 115
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.77 E-value=2.1e-08 Score=99.49 Aligned_cols=121 Identities=17% Similarity=0.264 Sum_probs=67.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
+.||+|||||++|+++|..|++. |++|+|||+.+..... .-+ +.. .++ ..+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~----~~g----l~~-------~~~--g~~~--------- 56 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYG----GCG----IPY-------YVS--GEVS--------- 56 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccc----ccc----cch-------hhc--CCCC---------
Confidence 46999999999999999999998 9999999998754211 100 000 000 0000
Q ss_pred EEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 84 MIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
.. ......++..........+..+++++++++|++++.+...+.+....+|+..+ +.+|.||.|+|...
T Consensus 57 ---~~-~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~-~~~d~lviAtG~~p 125 (472)
T 3iwa_A 57 ---NI-ESLQATPYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRT-LKYDKLVLALGSKA 125 (472)
T ss_dssp ----------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEE-EECSEEEECCCEEE
T ss_pred ---ch-HHhccccchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEE-EECCEEEEeCCCCc
Confidence 00 00000000000000223334689999999999999888888877521466444 89999999999743
No 116
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.77 E-value=2.6e-08 Score=100.14 Aligned_cols=111 Identities=20% Similarity=0.170 Sum_probs=74.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
+..+||+||||||+|+++|+.|++.|++|+|+|+.. . |.. .. ..++.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~--G------G~~----~~--------~~~~~------------- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF--G------GQV----LD--------TVDIE------------- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST--T------GGG----TT--------CSCBC-------------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC--C------Ccc----cc--------ccccc-------------
Confidence 346899999999999999999999999999998631 1 211 00 00100
Q ss_pred EEEecCCcEEEeeCCCC--CcH--HHHhcCCCCeEEeCceEEEEEec---CCeEEEEEccCCceeEEEeecEEEecCCCC
Q psy9141 84 MIHGQNGKLREIPYDPV--HNQ--VELEQYPDCNIYFQHKLINLDVN---SGNVTFYRTEDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~--~~~--~~~~~~~gv~i~~~~~v~~i~~~---~~~v~v~~~~~G~~~~~i~adlVV~AdG~~ 156 (379)
+..+ .++... ... ....+..+++++.+++|++++.+ ++.+++++. +|++ +++|.||.|+|.+
T Consensus 257 ---~~~~----~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~-~g~~---~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 257 ---NYIS----VPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETA-SGAV---LKARSIIIATGAK 325 (521)
T ss_dssp ---CBTT----BSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEET-TSCE---EEEEEEEECCCEE
T ss_pred ---ccCC----CCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEEC-CCCE---EEcCEEEECCCCC
Confidence 0000 000000 000 22234468999999999999764 236888888 8877 9999999999987
Q ss_pred hH
Q psy9141 157 SG 158 (379)
Q Consensus 157 S~ 158 (379)
+.
T Consensus 326 ~~ 327 (521)
T 1hyu_A 326 WR 327 (521)
T ss_dssp EC
T ss_pred cC
Confidence 63
No 117
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.74 E-value=1.6e-08 Score=99.13 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=72.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
++||+|||||++|+++|..|++.|. +|+|||+.+..... +. .++ . .+........
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~-----~~---~l~---~----------~~~~~~~~~~-- 60 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH-----LP---PLS---K----------AYLAGKATAE-- 60 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC-----SG---GGG---T----------TTTTTCSCSG--
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc-----CC---CCc---H----------HHhCCCCChH--
Confidence 5899999999999999999999998 79999987643210 00 000 0 0000000000
Q ss_pred EEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 84 MIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
.+.+. . .... +..+++++.+++|+.++.++.. +.+. +|++ +.+|.||.|+|..+..
T Consensus 61 ----------~~~~~-~--~~~~-~~~gv~~~~~~~v~~i~~~~~~--v~~~-~g~~---~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 61 ----------SLYLR-T--PDAY-AAQNIQLLGGTQVTAINRDRQQ--VILS-DGRA---LDYDRLVLATGGRPRP 116 (431)
T ss_dssp ----------GGBSS-C--HHHH-HHTTEEEECSCCEEEEETTTTE--EEET-TSCE---EECSEEEECCCEEECC
T ss_pred ----------Hhccc-C--HHHH-HhCCCEEEeCCEEEEEECCCCE--EEEC-CCCE---EECCEEEEcCCCCccC
Confidence 00000 0 1222 2368999999999999876654 5556 8876 9999999999987643
No 118
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.72 E-value=6.9e-09 Score=103.04 Aligned_cols=136 Identities=18% Similarity=0.226 Sum_probs=80.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
.++||+||||||+|+++|..|++.|++|+|||+.+... |...+.. ...+..++...+.++.+.... ...++.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~G------G~~~~~g-~~psk~l~~~~~~~~~~~~~~-~~~gi~ 75 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLG------GTCLNVG-CIPSKALLNNSHLFHQMHTEA-QKRGID 75 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS------HHHHHHS-HHHHHHHHHHHHHHHHHHHTS-GGGTEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcC------Cccceec-cHHHHHHHHHHHHHHHHHHHH-HhcCcc
Confidence 35899999999999999999999999999999975442 2111000 013445555555555554221 111222
Q ss_pred EEecCCcEEEeeCCCCCcH------------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCC--ce----eEEEee
Q psy9141 85 IHGQNGKLREIPYDPVHNQ------------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDN--SE----TKITDN 146 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~------------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G--~~----~~~i~a 146 (379)
.+ .. ...++...... ....+..+++++.++.+. .+++.+++.+. +| ++ .+ +++
T Consensus 76 ~~--~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~V~~~-~G~~~~~~~~~~-i~~ 146 (478)
T 1v59_A 76 VN--GD--IKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF---EDETKIRVTPV-DGLEGTVKEDHI-LDV 146 (478)
T ss_dssp EC--SC--EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---SSSSEEEEECC-TTCTTCCSSCEE-EEE
T ss_pred cC--CC--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEec-CCCcccccccce-EEe
Confidence 11 00 11111100000 112233689999998765 25667888776 66 22 12 679
Q ss_pred cEEEecCCCCh
Q psy9141 147 QLIIGADGAYS 157 (379)
Q Consensus 147 dlVV~AdG~~S 157 (379)
|.||.|+|.++
T Consensus 147 d~lViAtGs~p 157 (478)
T 1v59_A 147 KNIIVATGSEV 157 (478)
T ss_dssp EEEEECCCEEE
T ss_pred CEEEECcCCCC
Confidence 99999999876
No 119
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.72 E-value=7.9e-08 Score=93.30 Aligned_cols=48 Identities=13% Similarity=0.184 Sum_probs=40.6
Q ss_pred cCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
+..|++++++++|++++.+++++. +++. +|++ +.||.||.|.|..+..
T Consensus 195 ~~~GV~i~~~~~v~~i~~~~~~v~~V~~~-dG~~---i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 195 SGAGIRMHYGVRATEIAAEGDRVTGVVLS-DGNT---LPCDLVVVGVGVIPNV 243 (404)
T ss_dssp HHTTCEEECSCCEEEEEEETTEEEEEEET-TSCE---EECSEEEECCCEEECC
T ss_pred HhCCcEEEECCEEEEEEecCCcEEEEEeC-CCCE---EEcCEEEECcCCccCH
Confidence 346999999999999998777664 7888 8987 9999999999987643
No 120
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.70 E-value=1.2e-08 Score=101.55 Aligned_cols=135 Identities=14% Similarity=0.165 Sum_probs=77.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
++||+||||||+|+++|..|++.|++|+|||+++... |...+... ..+..++....+++.+..... .++.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~G------G~~~~~g~-~psk~ll~~~~~~~~~~~~~~--~gi~~ 76 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLG------GVCLNVGC-IPSKALLHNAAVIDEVRHLAA--NGIKY 76 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSS------HHHHHHSH-HHHHHHHHHHHHHHHHHHGGG--GTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC------Cceeeecc-cchHHHHHHHHHHHHHHHHHh--CCccc
Confidence 5899999999999999999999999999999976442 21110000 123334443333333321100 01100
Q ss_pred EecCCcEEEeeCCCCCcH------------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCC----------ceeEE
Q psy9141 86 HGQNGKLREIPYDPVHNQ------------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDN----------SETKI 143 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~------------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G----------~~~~~ 143 (379)
. ... .++...... ....+..+++++.++.+. .+++.+.+.+. +| +..+
T Consensus 77 ~--~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~-~g~~~~~~~~~g~~~~- 146 (482)
T 1ojt_A 77 P--EPE---LDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLEVSLT-AGDAYEQAAPTGEKKI- 146 (482)
T ss_dssp C--CCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEE-EEEETTEEEEEEEEEE-
T ss_pred C--CCc---cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEEEEec-CCcccccccccCcceE-
Confidence 0 000 000000000 122234689999887654 35567777655 55 1234
Q ss_pred EeecEEEecCCCChHH
Q psy9141 144 TDNQLIIGADGAYSGV 159 (379)
Q Consensus 144 i~adlVV~AdG~~S~v 159 (379)
+++|.||.|+|.++..
T Consensus 147 i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 147 VAFKNCIIAAGSRVTK 162 (482)
T ss_dssp EEEEEEEECCCEEECC
T ss_pred EEcCEEEECCCCCCCC
Confidence 9999999999998754
No 121
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.69 E-value=2.1e-08 Score=100.11 Aligned_cols=48 Identities=8% Similarity=0.102 Sum_probs=41.5
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
+..|++++++++|++++.+++++.+.+. +|++ +++|.||.|.|..+.+
T Consensus 234 ~~~GV~i~~~~~V~~i~~~~~~v~v~~~-~g~~---i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 234 AERGVRLFKNARAASVTRTGAGVLVTMT-DGRT---VEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHTTCEEETTCCEEEEEECSSSEEEEET-TSCE---EEESEEEECCCEEECC
T ss_pred HHCCCEEEeCCEEEEEEEeCCEEEEEEC-CCcE---EEcCEEEECCCCCcCC
Confidence 3469999999999999987777888887 8877 9999999999998765
No 122
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.69 E-value=3.3e-09 Score=105.11 Aligned_cols=139 Identities=17% Similarity=0.170 Sum_probs=78.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
+.++||+||||||+|+++|..|++.|++|+|||+.+..... ..+... ..+..++....+++.+.... ...+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~------~~~~g~-~p~k~l~~~~~~~~~~~~~~-~~~g~ 75 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGT------CLNVGC-IPSKALLHSSHMYHEAKHSF-ANHGV 75 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCS------HHHHSH-HHHHHHHHHHHHHHHHHHTH-HHHTE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccc------ccCcCc-cchHHHHHHHHHHHHHHHHH-HhcCc
Confidence 34689999999999999999999999999999998654321 110000 11222222222222222100 00011
Q ss_pred EEEecCCcEEEeeCCCCCcH------------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEe
Q psy9141 84 MIHGQNGKLREIPYDPVHNQ------------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIG 151 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~------------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~ 151 (379)
.. .. ...++...... ....+..+++++.++.+. .+.+.+++.+. +|+..+ +++|.||.
T Consensus 76 ~~---~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~-~G~~~~-i~~d~lIi 145 (470)
T 1dxl_A 76 KV---SN--VEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---VSPSEISVDTI-EGENTV-VKGKHIII 145 (470)
T ss_dssp EE---SC--EEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---EETTEEEECCS-SSCCEE-EECSEEEE
T ss_pred cc---CC--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEEEEEeC-CCceEE-EEcCEEEE
Confidence 10 00 01111100000 112223589999998654 35567888776 773223 99999999
Q ss_pred cCCCChHHH
Q psy9141 152 ADGAYSGVR 160 (379)
Q Consensus 152 AdG~~S~vr 160 (379)
|+|..+...
T Consensus 146 AtGs~p~~p 154 (470)
T 1dxl_A 146 ATGSDVKSL 154 (470)
T ss_dssp CCCEEECCB
T ss_pred CCCCCCCCC
Confidence 999987544
No 123
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.69 E-value=5.1e-08 Score=95.67 Aligned_cols=111 Identities=15% Similarity=0.134 Sum_probs=72.7
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHh---CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAK---NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHG 77 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~---~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~ 77 (379)
|+.| .||+|||||++|+++|..|++ .|++|+|||+.+.... .+.. ..+....
T Consensus 1 M~~m--~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------------~~~~----------~~~~~g~ 55 (437)
T 3sx6_A 1 MRGS--AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------------VPSN----------PWVGVGW 55 (437)
T ss_dssp CTTS--CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------------GGGH----------HHHHHTS
T ss_pred CCCC--CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------------cCCc----------cccccCc
Confidence 5544 499999999999999999999 8999999998873311 1111 1111000
Q ss_pred CCceeeEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 78 IPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 78 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
....... .. . ....+..+++++. .+|++++.++. ++++. +|++ +.+|.||.|+|..+
T Consensus 56 ~~~~~~~----------~~---l---~~~~~~~gv~~~~-~~v~~id~~~~--~V~~~-~g~~---i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 56 KERDDIA----------FP---I---RHYVERKGIHFIA-QSAEQIDAEAQ--NITLA-DGNT---VHYDYLMIATGPKL 112 (437)
T ss_dssp SCHHHHE----------EE---C---HHHHHTTTCEEEC-SCEEEEETTTT--EEEET-TSCE---EECSEEEECCCCEE
T ss_pred cCHHHHH----------HH---H---HHHHHHCCCEEEE-eEEEEEEcCCC--EEEEC-CCCE---EECCEEEECCCCCc
Confidence 0000000 00 0 2233346899875 68999987766 45566 8877 99999999999976
Q ss_pred HH
Q psy9141 158 GV 159 (379)
Q Consensus 158 ~v 159 (379)
..
T Consensus 113 ~~ 114 (437)
T 3sx6_A 113 AF 114 (437)
T ss_dssp CG
T ss_pred Cc
Confidence 53
No 124
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.69 E-value=7.8e-08 Score=95.04 Aligned_cols=38 Identities=13% Similarity=0.243 Sum_probs=35.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
..+||+|||+|++|+++|+.|++.|++|+|+|+++...
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 46899999999999999999999999999999998654
No 125
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.68 E-value=4.1e-08 Score=102.83 Aligned_cols=43 Identities=14% Similarity=0.126 Sum_probs=38.4
Q ss_pred CCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCC
Q psy9141 110 PDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 110 ~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~ 156 (379)
.+++|+++++|++|+.++++++|++. +|++ ++||.||.|....
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~-~G~~---i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTT-DGTG---YSAQKVLVTVPLA 584 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEET-TCCE---EEESEEEECCCHH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEEC-CCcE---EEcCEEEECCCHH
Confidence 37899999999999999999999998 8877 9999999999653
No 126
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.68 E-value=9.9e-08 Score=92.65 Aligned_cols=109 Identities=15% Similarity=0.123 Sum_probs=70.4
Q ss_pred cEEEECCChHHHHHHHHHHh---CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 8 SVVIVGGGLVGSLSACMFAK---NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~---~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
||+|||||++|+++|..|++ .|++|+|||+++..... . .+. ........
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~----~-----~~~--------------~~~~~~~~----- 54 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR----P-----ALP--------------HVAIGVRD----- 54 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC----C-----SSC--------------CCCSSCCC-----
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec----c-----chh--------------hcccCCcC-----
Confidence 89999999999999999999 89999999998743211 0 000 00000000
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
... .... ........+++++.+ +|++++.++..+++... +++..+ +++|.||.|+|....
T Consensus 55 ----~~~-~~~~------~~~~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g-~~~~~~-~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 55 ----VDE-LKVD------LSEALPEKGIQFQEG-TVEKIDAKSSMVYYTKP-DGSMAE-EEYDYVIVGIGAHLA 114 (409)
T ss_dssp ----CCC-EEEE------HHHHTGGGTCEEEEC-EEEEEETTTTEEEEECT-TSCEEE-EECSEEEECCCCEEC
T ss_pred ----HHH-HHHH------HHHHHhhCCeEEEEe-eEEEEeCCCCEEEEccC-Ccccce-eeCCEEEECCCCCcC
Confidence 000 0000 022233458999987 89999887777666533 333345 899999999998654
No 127
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.67 E-value=4.2e-08 Score=97.77 Aligned_cols=114 Identities=18% Similarity=0.232 Sum_probs=73.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCC---CcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCce
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQ---YEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMR 81 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G---~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~ 81 (379)
.++||+||||||+|+++|..|++.| .+|+|||+.+..... + + +... .+........
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~----~--------~-~~~~--------~~~~~~~~~~ 92 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFL----G--------A-GMAL--------WIGEQIAGPE 92 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBC----G--------G-GHHH--------HHTTSSSCSG
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcc----c--------c-ccch--------hhcCccCCHH
Confidence 4589999999999999999999988 999999998643211 1 1 1100 0000000000
Q ss_pred eeEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 82 ARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
. +.+.. ...+. ..+++++.+++|+.++.+++.+++.. +|+..+ +++|.||.|+|..+.
T Consensus 93 ~------------~~~~~---~~~~~-~~gv~v~~~~~v~~i~~~~~~v~v~~--~g~~~~-~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 93 G------------LFYSD---KEELE-SLGAKVYMESPVQSIDYDAKTVTALV--DGKNHV-ETYDKLIFATGSQPI 150 (490)
T ss_dssp G------------GBSCC---HHHHH-HTTCEEETTCCEEEEETTTTEEEEEE--TTEEEE-EECSEEEECCCEEEC
T ss_pred H------------hhhcC---HHHHH-hCCCEEEeCCEEEEEECCCCEEEEEe--CCcEEE-EECCEEEECCCCCcC
Confidence 0 00110 12232 35899999999999988888877753 232223 999999999997653
No 128
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.66 E-value=5.1e-08 Score=96.43 Aligned_cols=48 Identities=6% Similarity=0.031 Sum_probs=38.9
Q ss_pred cCCCCeEEeCceEEEEEecCCe-EEEE-EccCCceeEEEeecEEEecCCCChHHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGN-VTFY-RTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~-v~v~-~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
+..|++++.+++|++++.++++ +.++ +. +|+ +++|.||.|.|..+.+.
T Consensus 222 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~-~g~----i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 222 EEKGIRILCEDIIQSVSADADGRRVATTMK-HGE----IVADQVMLALGRMPNTN 271 (463)
T ss_dssp HHTTCEEECSCCEEEEEECTTSCEEEEESS-SCE----EEESEEEECSCEEESCT
T ss_pred HHCCCEEECCCEEEEEEEcCCCEEEEEEcC-CCe----EEeCEEEEeeCcccCCC
Confidence 4469999999999999987655 6677 76 775 78999999999976543
No 129
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.65 E-value=3.7e-08 Score=97.49 Aligned_cols=136 Identities=20% Similarity=0.219 Sum_probs=74.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
++||+||||||+|+++|..|++.|++|+||||.+... |...+... ..+..++......+.+..........
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G------G~~~~~gc-iPsk~l~~~a~~~~~~~~~~~~~~~~-- 74 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG------GNCLYSGC-VPSKTVREVIQTAWRLTNIANVKIPL-- 74 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS------HHHHHHSH-HHHHHHHHHHHHHHHHHHHHCSCCCC--
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC------CcccccCC-CchHHHHHHHHHHHHHHhcccCCCCc--
Confidence 5899999999999999999999999999999876543 21100000 01111221111111111110000000
Q ss_pred EecCCcE-EEeeCCCCCc--H--HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKL-REIPYDPVHN--Q--VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~-~~~~~~~~~~--~--~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
+...-. ....+... . . ....+..+++++.+ +++.++ .+.+.+... +|++.+ +.+|.||.|+|...
T Consensus 75 -~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~v~~~~g-~v~~id--~~~~~V~~~-~g~~~~-~~~d~lviAtG~~p 144 (466)
T 3l8k_A 75 -DFSTVQDRKDYVQEL-RFKQHKRNMSQYETLTFYKG-YVKIKD--PTHVIVKTD-EGKEIE-AETRYMIIASGAET 144 (466)
T ss_dssp -CHHHHHHHHHHHHHH-HHHHHHHHHTTCTTEEEESE-EEEEEE--TTEEEEEET-TSCEEE-EEEEEEEECCCEEE
T ss_pred -CHHHHHHHHHhheec-cccchHHHHHHhCCCEEEEe-EEEEec--CCeEEEEcC-CCcEEE-EecCEEEECCCCCc
Confidence 000000 00000000 0 1 22334568888877 566554 567888887 887666 88999999999754
No 130
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.65 E-value=8.2e-08 Score=94.63 Aligned_cols=111 Identities=19% Similarity=0.289 Sum_probs=71.9
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
+||+||||||+|+++|..|++. |.+|+|||+.+..... ..++ .. .+. + ..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~----~~~~----~~----~~~--~---~~----------- 54 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYL----SGGL----SA----YFN--H---TI----------- 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSC----CC----------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCccc----Cccc----hh----hhc--C---CC-----------
Confidence 4999999999999999999998 8999999999754311 1000 00 000 0 00
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
... ....+. . ..... ..+++++.+++|++++.+...+++... ++..+ +++|.||.|+|...
T Consensus 55 -~~~----~~~~~~-~--~~~~~-~~gi~~~~~~~V~~id~~~~~v~v~~~--~~~~~-~~~d~lviAtG~~p 115 (452)
T 3oc4_A 55 -NEL----HEARYI-T--EEELR-RQKIQLLLNREVVAMDVENQLIAWTRK--EEQQW-YSYDKLILATGASQ 115 (452)
T ss_dssp -----------CCC-C--HHHHH-HTTEEEECSCEEEEEETTTTEEEEEET--TEEEE-EECSEEEECCCCCB
T ss_pred -CCH----HHhhcC-C--HHHHH-HCCCEEEECCEEEEEECCCCEEEEEec--CceEE-EEcCEEEECCCccc
Confidence 000 000010 1 12222 358999999999999998888887633 23334 99999999999865
No 131
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.63 E-value=7.9e-08 Score=94.63 Aligned_cols=111 Identities=23% Similarity=0.341 Sum_probs=68.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCcee
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~ 82 (379)
+.+||+|||||++|+++|..|++. |++|+|||+.+..... ... + +. .+. +
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~----~~~----~-p~------------~~~--~----- 53 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA----PCG----I-PY------------VVE--G----- 53 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC----------------------------------------
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC----CcC----C-cc------------ccC--C-----
Confidence 357999999999999999999998 8899999998744211 000 0 00 000 0
Q ss_pred eEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 83 RMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
. .... . ...+.. ....+..+++++++++|++++. +..++.+. +|+ .+ +.+|.||.|+|...
T Consensus 54 ~--~~~~-~--~~~~~~----~~~~~~~gi~v~~~~~v~~i~~--~~~~v~~~-~g~-~~-~~~d~lviAtG~~p 114 (449)
T 3kd9_A 54 L--STPD-K--LMYYPP----EVFIKKRGIDLHLNAEVIEVDT--GYVRVREN-GGE-KS-YEWDYLVFANGASP 114 (449)
T ss_dssp ---------------------CTHHHHTTCEEETTCEEEEECS--SEEEEECS-SSE-EE-EECSEEEECCCEEE
T ss_pred C--CCHH-H--hhhcCH----HHHHHhcCcEEEecCEEEEEec--CCCEEEEC-Cce-EE-EEcCEEEECCCCCC
Confidence 0 0000 0 000000 1132336899999999998854 34556655 663 23 89999999999654
No 132
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.62 E-value=1.3e-07 Score=96.33 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=77.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCce
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMR 81 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~ 81 (379)
|...||+|||||++|+++|..|++. |++|+|||+.+..... +.+.. ..+.....+.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~-------------~~~lp--------~~~~g~~~~~- 91 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFA-------------NCGLP--------YYIGGVITER- 91 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC-------------GGGHH--------HHHTTSSCCG-
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcccc-------------CCCCc--------hhhcCcCCCh-
Confidence 4457999999999999999999998 8999999998754211 11110 0010000000
Q ss_pred eeEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 82 ARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
. . .+... .....+..+++++++++|++++.++..+.+....+|+..+ +.+|.||.|+|...
T Consensus 92 -------~-~----~~~~~--~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~-~~~d~lviAtG~~p 152 (588)
T 3ics_A 92 -------Q-K----LLVQT--VERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYN-EAYDVLILSPGAKP 152 (588)
T ss_dssp -------G-G----GBSSC--HHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEE-EECSEEEECCCEEE
T ss_pred -------H-H----hhccC--HHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEE-EeCCEEEECCCCCC
Confidence 0 0 01100 0333334689999999999999988888887532566444 89999999999753
No 133
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.62 E-value=2.2e-07 Score=92.27 Aligned_cols=114 Identities=15% Similarity=0.112 Sum_probs=75.2
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
+||+||||||+|+++|..|++. |.+|+|||+.+..... . + +...+ +........
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~----~--------~-~~~~~--------~~~~~~~~~--- 92 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA----Q--------C-GLPYV--------ISGAIASTE--- 92 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC----G--------G-GHHHH--------HTTSSSCGG---
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCC----C--------C-Ccchh--------hcCCcCCHH---
Confidence 5999999999999999999996 8999999998654211 0 0 00000 000000000
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEE-ccCCceeEEEeecEEEecCCCChH
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYR-TEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~-~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
. + .... .....+..+++++.+++|+.++.+++.+++.. . +|+..+ +++|.||.|+|....
T Consensus 93 ------~---l-~~~~--~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~-~g~~~~-~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 93 ------K---L-IARN--VKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTK-TKDVFE-FSYDRLLIATGVRPV 153 (480)
T ss_dssp ------G---G-BSSC--HHHHHHTTCCEEESSEEEEEEETTTTEEEEEETT-TCCEEE-EECSEEEECCCEEEC
T ss_pred ------H---h-hhcC--HHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcC-CCceEE-EEcCEEEECCCCccc
Confidence 0 0 0000 13343446899999999999998888888776 4 576334 999999999997653
No 134
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.62 E-value=2.3e-07 Score=91.73 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=38.8
Q ss_pred CCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 109 YPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 109 ~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..|++++++++|++++.+++.+.+.+. +.+ +++|.||.|.|..+.+.
T Consensus 228 ~~Gv~i~~~~~v~~i~~~~~~~~v~~~--~~~---i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 228 AEGIEVLEHTQASQVAHMDGEFVLTTT--HGE---LRADKLLVATGRTPNTR 274 (467)
T ss_dssp HTTCEEETTCCEEEEEEETTEEEEEET--TEE---EEESEEEECSCEEESCT
T ss_pred hCCCEEEcCCEEEEEEEeCCEEEEEEC--CcE---EEcCEEEECCCCCcCCC
Confidence 468999999999999987777777765 444 99999999999987653
No 135
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.61 E-value=2.4e-07 Score=85.91 Aligned_cols=108 Identities=14% Similarity=0.097 Sum_probs=68.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEE-EccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNL-YEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~v-iE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
..+||+||||||+|+++|..|++.|++|+| +|+.. .. |... .. . ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~g------G~~~---~~----------~----------~~--- 49 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-PG------GQIT---SS----------S----------EI--- 49 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-TT------GGGG---GC----------S----------CB---
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-CC------ceee---ee----------c----------ee---
Confidence 357999999999999999999999999999 99932 21 2110 00 0 00
Q ss_pred EEEecCCcEEEeeCCCCCcH-----HHHhcCCCCeEEeCceEEEEEecC--CeEEEEEccCCceeEEEeecEEEecCCCC
Q psy9141 84 MIHGQNGKLREIPYDPVHNQ-----VELEQYPDCNIYFQHKLINLDVNS--GNVTFYRTEDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----~~~~~~~gv~i~~~~~v~~i~~~~--~~v~v~~~~~G~~~~~i~adlVV~AdG~~ 156 (379)
....+. +....... ....+..+++++++ +|+++ .++ +.+.+.+..++ + +.+|.||.|+|..
T Consensus 50 --~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~---~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 50 --ENYPGV----AQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-T---ELAKAVIVCTGSA 117 (315)
T ss_dssp --CCSTTC----CSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-E---EEEEEEEECCCEE
T ss_pred --ccCCCC----CCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-E---EEeCEEEEeeCCC
Confidence 000000 00000000 23344568999988 89999 666 67775444133 4 9999999999974
Q ss_pred h
Q psy9141 157 S 157 (379)
Q Consensus 157 S 157 (379)
.
T Consensus 118 ~ 118 (315)
T 3r9u_A 118 P 118 (315)
T ss_dssp E
T ss_pred C
Confidence 3
No 136
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.60 E-value=9.3e-08 Score=93.01 Aligned_cols=111 Identities=15% Similarity=0.198 Sum_probs=71.4
Q ss_pred CCC-CCCCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCC
Q psy9141 1 MKC-NSKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHG 77 (379)
Q Consensus 1 M~~-m~~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~ 77 (379)
|++ +.++||+||||||+|+++|..|++.|. +|+|+|+.+.... .+. .++ ..++.. ..
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~-----~~~---~~~---~~~~~~---------~~ 60 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPY-----DRP---PLS---KDFMAH---------GD 60 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCB-----CSG---GGG---THHHHH---------CC
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcc-----cCC---CCC---HHHhCC---------Cc
Confidence 543 346899999999999999999999998 4999999864321 110 011 111111 00
Q ss_pred CCceeeEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 78 IPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 78 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
.... .+ .. . ...+++++.+++|+.++.+... +++. +|++ +.+|.||.|+|..+
T Consensus 61 --~~~~----------~~--~~------~-~~~~v~~~~~~~v~~i~~~~~~--v~~~-~g~~---~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 61 --AEKI----------RL--DC------K-RAPEVEWLLGVTAQSFDPQAHT--VALS-DGRT---LPYGTLVLATGAAP 113 (408)
T ss_dssp --GGGS----------BC--CC------T-TSCSCEEEETCCEEEEETTTTE--EEET-TSCE---EECSEEEECCCEEE
T ss_pred --hhhh----------hH--HH------H-HHCCCEEEcCCEEEEEECCCCE--EEEC-CCCE---EECCEEEECCCCCC
Confidence 0000 00 01 1 1358999999999999876544 5556 7876 99999999999865
Q ss_pred H
Q psy9141 158 G 158 (379)
Q Consensus 158 ~ 158 (379)
.
T Consensus 114 ~ 114 (408)
T 2gqw_A 114 R 114 (408)
T ss_dssp C
T ss_pred C
Confidence 3
No 137
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.60 E-value=9.7e-08 Score=95.88 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+.+|||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 457899999999999999999999999999999975
No 138
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.60 E-value=1.2e-08 Score=101.19 Aligned_cols=133 Identities=17% Similarity=0.165 Sum_probs=75.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHH-----hCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLL-----AHGIP 79 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~-----~~~~~ 79 (379)
.++||+||||||+|+++|..|++.|++|+|||+.+... |...+... ..+..++.....+..+. ..+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~G------G~~~~~g~-~Psk~l~~~~~~~~~~~~~~~~~~g~~ 77 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLG------GTCLNVGC-IPSKALLNNSHYYHMAHGTDFASRGIE 77 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSS------HHHHHHSH-HHHHHHHHHHHHHHHHHSSHHHHTTEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcC------CcccccCc-cchHHHHHHHHHHHHhhhhhHhhCccc
Confidence 45899999999999999999999999999999986542 11000000 11222332222222221 11211
Q ss_pred ceeeEEEecCCcEEEeeCCCCCc----------H--HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeec
Q psy9141 80 MRARMIHGQNGKLREIPYDPVHN----------Q--VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQ 147 (379)
Q Consensus 80 ~~~~~~~~~~g~~~~~~~~~~~~----------~--~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~ad 147 (379)
.. . ...++..... . ....+..+++++.++.+ .+ +.+.+++.+. +|...+ +++|
T Consensus 78 ~~--------~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~~~~~v~~~-~gg~~~-~~~d 142 (474)
T 1zmd_A 78 MS--------E--VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GKNQVTATKA-DGGTQV-IDTK 142 (474)
T ss_dssp ES--------C--EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ETTEEEEECT-TSCEEE-EEEE
T ss_pred cC--------C--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cCCEEEEEec-CCCcEE-EEeC
Confidence 00 0 0111110000 0 12223368999998653 23 5667888776 632223 9999
Q ss_pred EEEecCCCChHH
Q psy9141 148 LIIGADGAYSGV 159 (379)
Q Consensus 148 lVV~AdG~~S~v 159 (379)
.||.|+|..+..
T Consensus 143 ~lViAtGs~p~~ 154 (474)
T 1zmd_A 143 NILIATGSEVTP 154 (474)
T ss_dssp EEEECCCEEECC
T ss_pred EEEECCCCCCCC
Confidence 999999987643
No 139
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.59 E-value=2.6e-07 Score=89.14 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=73.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
++.+|+|||||+||+++|..|++.+.+|+|||+.+..... + +.--..+. .......
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~-----~-------~~l~~~l~----------g~~~~~~-- 63 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY-----R-------PRLNEIIA----------KNKSIDD-- 63 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC-----G-------GGHHHHHH----------SCCCGGG--
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc-----c-------ChhhHHHc----------CCCCHHH--
Confidence 4679999999999999999998889999999998754211 1 11001111 1000000
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
+ +... ....+..+++++++++|++++.++.. +++. +|++ +.+|.||.|+|...
T Consensus 64 ----------l-~~~~---~~~~~~~~i~~~~~~~V~~id~~~~~--v~~~-~g~~---~~yd~lvlAtG~~p 116 (385)
T 3klj_A 64 ----------I-LIKK---NDWYEKNNIKVITSEFATSIDPNNKL--VTLK-SGEK---IKYEKLIIASGSIA 116 (385)
T ss_dssp ----------T-BSSC---HHHHHHTTCEEECSCCEEEEETTTTE--EEET-TSCE---EECSEEEECCCEEE
T ss_pred ----------c-cCCC---HHHHHHCCCEEEeCCEEEEEECCCCE--EEEC-CCCE---EECCEEEEecCCCc
Confidence 0 0001 11222358999999999999887764 4556 8887 99999999999743
No 140
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.58 E-value=2.7e-07 Score=90.71 Aligned_cols=112 Identities=15% Similarity=0.170 Sum_probs=73.2
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 8 SVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
||+|||||++|+++|..|++. |.+|+|||+.+..... + + ..... +.........
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~----~--------~-~~~~~--------~~~~~~~~~~--- 57 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL----S--------A-GMQLY--------LEGKVKDVNS--- 57 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC----G--------G-GHHHH--------HTTSSCCGGG---
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc----c--------c-cchhh--------hcCccCCHHH---
Confidence 899999999999999999998 9999999998643211 1 1 10000 0000000000
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
+ .... ...+.+ .+++++.+++++.++.+++.+++....+|+..+ +++|.||.|+|...
T Consensus 58 ---------~-~~~~--~~~~~~-~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~-~~~d~lviAtG~~p 115 (447)
T 1nhp_A 58 ---------V-RYMT--GEKMES-RGVNVFSNTEITAIQPKEHQVTVKDLVSGEERV-ENYDKLIISPGAVP 115 (447)
T ss_dssp ---------S-BSCC--HHHHHH-TTCEEEETEEEEEEETTTTEEEEEETTTCCEEE-EECSEEEECCCEEE
T ss_pred ---------h-hcCC--HHHHHH-CCCEEEECCEEEEEeCCCCEEEEEecCCCceEE-EeCCEEEEcCCCCc
Confidence 0 0011 122333 489999999999998888888776521566445 89999999999764
No 141
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.57 E-value=8e-08 Score=94.77 Aligned_cols=132 Identities=15% Similarity=0.127 Sum_probs=75.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
++||+||||||+|+++|..|++.|++|+|||+.. .. |...+..- ..+..++.....++.+... ...+..+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~g------G~~~~~g~-~p~k~l~~~~~~~~~~~~~--~~~g~~~ 72 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN-LG------GVCLNVGC-IPSKALISASHRYEQAKHS--EEMGIKA 72 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TT------HHHHHTSH-HHHHHHHHHHHHHHHHHTC--GGGTEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC-CC------CcCcCcCc-hhhHHHHHHHHHHHHHHHH--HhcCccc
Confidence 4799999999999999999999999999999972 21 21110000 1122223222222332211 0011110
Q ss_pred EecCCcEEEeeCCCCCcH------------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCC-ceeEEEeecEEEec
Q psy9141 86 HGQNGKLREIPYDPVHNQ------------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDN-SETKITDNQLIIGA 152 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~------------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G-~~~~~i~adlVV~A 152 (379)
.. ...++...... ....+..+++++.++.+. .+.+.+++.+. +| ++ +++|.||.|
T Consensus 73 ---~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---id~~~v~V~~~-~G~~~---i~~d~lViA 140 (455)
T 1ebd_A 73 ---EN--VTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF---VDANTVRVVNG-DSAQT---YTFKNAIIA 140 (455)
T ss_dssp ---CS--CEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE---EETTEEEEEET-TEEEE---EECSEEEEC
T ss_pred ---CC--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEeC-CCcEE---EEeCEEEEe
Confidence 00 00111100000 122345689999998653 35677888877 77 44 999999999
Q ss_pred CCCChHH
Q psy9141 153 DGAYSGV 159 (379)
Q Consensus 153 dG~~S~v 159 (379)
+|..+..
T Consensus 141 TGs~p~~ 147 (455)
T 1ebd_A 141 TGSRPIE 147 (455)
T ss_dssp CCEEECC
T ss_pred cCCCCCC
Confidence 9987643
No 142
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.56 E-value=2.6e-07 Score=90.40 Aligned_cols=106 Identities=18% Similarity=0.208 Sum_probs=69.4
Q ss_pred CcEEEECCChHHHHHHHHHHh--CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAK--NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~--~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
.||+|||||++|+++|..|++ .|++|+|||+++..... +.. ..+.........
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-------------~~~----------~~~~~g~~~~~~-- 57 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------------PAF----------PHLAMGWRKFED-- 57 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------------GGH----------HHHHHTCSCGGG--
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-------------CCc----------chhccCccCHHH--
Confidence 599999999999999999999 89999999998643210 110 111111001111
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
....+.. ..+..+++++.+ +|+.++.+.. ++.+. +|++ +.+|.||.|+|....
T Consensus 58 --------~~~~~~~------~~~~~gv~~~~~-~v~~id~~~~--~v~~~-~g~~---i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 58 --------ISVPLAP------LLPKFNIEFINE-KAESIDPDAN--TVTTQ-SGKK---IEYDYLVIATGPKLV 110 (430)
T ss_dssp --------SEEESTT------TGGGGTEEEECS-CEEEEETTTT--EEEET-TCCE---EECSEEEECCCCEEE
T ss_pred --------HHHHHHH------HHHhcCCEEEEE-EEEEEECCCC--EEEEC-CCcE---EECCEEEEcCCcccc
Confidence 1111111 122258888864 8999987665 45566 8876 999999999998753
No 143
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.56 E-value=1.6e-07 Score=95.07 Aligned_cols=113 Identities=17% Similarity=0.211 Sum_probs=74.3
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 8 SVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
||+||||||+|+++|..|++. |++|+|||+.+..... . ..... .+.....+
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~----~---------~~l~~--------~~~~~~~~------ 55 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA----N---------CGLPY--------HISGEIAQ------ 55 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC----G---------GGHHH--------HHTSSSCC------
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc----c---------cCchH--------HhcCCcCC------
Confidence 899999999999999999998 8899999999754211 1 11100 00000000
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
... ...... ....+..+++++++++|++++.++..+++....+|+..+ +.+|.||.|+|...
T Consensus 56 ---~~~---~~~~~~---~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~-~~~d~lviAtG~~p 117 (565)
T 3ntd_A 56 ---RSA---LVLQTP---ESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQ-ESYDTLLLSPGAAP 117 (565)
T ss_dssp ---GGG---GBCCCH---HHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEE-EECSEEEECCCEEE
T ss_pred ---hHH---hhccCH---HHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEE-EECCEEEECCCCCC
Confidence 000 000111 223333589999999999999888888877532465445 89999999999853
No 144
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.55 E-value=2.5e-07 Score=91.14 Aligned_cols=116 Identities=18% Similarity=0.193 Sum_probs=73.0
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
+||+|||||++|+++|..|++. |.+|+|||+.+..... +.+ ....+ -|.... .....
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~----~~~--------~~~~~--~g~~~~-----~~~~~-- 59 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFL----SCG--------IALYL--GKEIKN-----NDPRG-- 59 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBC----GGG--------HHHHH--TTCBGG-----GCGGG--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcc----ccc--------chhhh--cCCccc-----CCHHH--
Confidence 4899999999999999999998 9999999998743211 100 00000 010000 00000
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+.+. . ..... ..+++++.+++++.++.+++.+.+....+|+..+ +++|.||.|+|..+.
T Consensus 60 ----------~~~~-~--~~~~~-~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~-~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 60 ----------LFYS-S--PEELS-NLGANVQMRHQVTNVDPETKTIKVKDLITNEEKT-EAYDKLIMTTGSKPT 118 (452)
T ss_dssp ----------GBSC-C--HHHHH-HTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEE-EECSEEEECCCEEEC
T ss_pred ----------hhhc-C--HHHHH-HcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEE-EECCEEEEccCCCcC
Confidence 0011 1 12222 3589999999999998888887776521333234 999999999997553
No 145
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.54 E-value=2.9e-07 Score=90.28 Aligned_cols=45 Identities=7% Similarity=0.075 Sum_probs=38.2
Q ss_pred CCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 110 PDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 110 ~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
.|++|+++++|++|..++++++.... +|++ ++||.||.|.|.++.
T Consensus 247 ~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~---~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 247 YGGTYMLNKPVDDIIMENGKVVGVKS-EGEV---ARCKQLICDPSYVPD 291 (433)
T ss_dssp HTCCCBCSCCCCEEEEETTEEEEEEE-TTEE---EECSEEEECGGGCGG
T ss_pred cCCEEECCCEEEEEEEeCCEEEEEEE-CCeE---EECCEEEECCCCCcc
Confidence 47899999999999988888775445 7877 999999999999874
No 146
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.53 E-value=4.9e-07 Score=89.80 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
+.+|||+||||||+|+++|+.|++.|++|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 35799999999999999999999999999999963
No 147
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.51 E-value=1e-06 Score=84.80 Aligned_cols=102 Identities=17% Similarity=0.207 Sum_probs=77.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+++|||||++|+.+|..|++.|.+|+++|+.+..... .+.+...+.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~~~~~~~~~l--------------------- 193 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------LLHPAAAKAV--------------------- 193 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHH---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------ccCHHHHHHH---------------------
Confidence 458999999999999999999999999999987643210 0111111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
....+..|++++++++|++++.+++++.+.+. +|++ +++|.||.|+|..+.+.
T Consensus 194 ------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~-~g~~---i~~d~vv~a~G~~p~~~ 246 (384)
T 2v3a_A 194 ------------------QAGLEGLGVRFHLGPVLASLKKAGEGLEAHLS-DGEV---IPCDLVVSAVGLRPRTE 246 (384)
T ss_dssp ------------------HHHHHTTTCEEEESCCEEEEEEETTEEEEEET-TSCE---EEESEEEECSCEEECCH
T ss_pred ------------------HHHHHHcCCEEEeCCEEEEEEecCCEEEEEEC-CCCE---EECCEEEECcCCCcCHH
Confidence 11222368999999999999988888888888 8877 99999999999988654
No 148
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.51 E-value=3.4e-07 Score=89.06 Aligned_cols=107 Identities=18% Similarity=0.250 Sum_probs=70.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCc--EEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYE--VNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~--V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
.+|+|||||++|+++|..|++.|++ |+|+|+.+..... +. .++ ..+.........
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~-----~~---~l~-------------~~~~~g~~~~~~-- 59 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD-----RP---SLS-------------KAVLDGSLERPP-- 59 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC-----SG---GGG-------------THHHHTSSSSCC--
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC-----Cc---ccc-------------HHHhCCCCCHHH--
Confidence 3899999999999999999999987 9999998754211 10 011 111111001000
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
+ +... .... ..+++++.+++|+.++.+... +.+. +|++ +.+|.||.|+|...
T Consensus 60 ----------~-~~~~---~~~~-~~~i~~~~~~~v~~id~~~~~--v~~~-~g~~---~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 60 ----------I-LAEA---DWYG-EARIDMLTGPEVTALDVQTRT--ISLD-DGTT---LSADAIVIATGSRA 111 (410)
T ss_dssp ----------B-SSCT---THHH-HTTCEEEESCCEEEEETTTTE--EEET-TSCE---EECSEEEECCCEEE
T ss_pred ----------h-cCCH---HHHH-HCCCEEEeCCEEEEEECCCCE--EEEC-CCCE---EECCEEEEccCCcc
Confidence 0 0011 1122 258999999999999876654 4556 8877 99999999999653
No 149
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.51 E-value=6.7e-08 Score=90.10 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=33.1
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|++| +|||+||||||||+++|+.|++.|++|+|||+..
T Consensus 2 Mte~-~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 2 MTEI-DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp --CC-SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCC-CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 5543 6999999999999999999999999999999864
No 150
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.50 E-value=2.9e-07 Score=91.79 Aligned_cols=129 Identities=17% Similarity=0.191 Sum_probs=73.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCce
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMR 81 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~ 81 (379)
|..+||+|||||++|+++|..|++. |.+|+|||+.+.......+-+..+ +........+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l---~~~~~~~~~~~--------------- 70 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKEL---WFSDDPNVTKT--------------- 70 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGG---GCC--CTHHHH---------------
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHh---hcCCccchhhc---------------
Confidence 4568999999999999999999887 889999999875421100001100 00000000000
Q ss_pred eeEEEecCCcEEEeeCCC---CCcHHHH--hcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCC
Q psy9141 82 ARMIHGQNGKLREIPYDP---VHNQVEL--EQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~---~~~~~~~--~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~ 156 (379)
..+....+....+.+.. ......+ ....+++++.+++|++++.+... |++. +|++ +.+|.||.|+|..
T Consensus 71 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~--V~~~-~g~~---i~yd~lviATGs~ 143 (493)
T 1m6i_A 71 -LRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNM--VKLN-DGSQ---ITYEKCLIATGGT 143 (493)
T ss_dssp -CEEECTTSCEEESBSSCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTE--EEET-TSCE---EEEEEEEECCCEE
T ss_pred -ccccccccccccccccchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCE--EEEC-CCCE---EECCEEEECCCCC
Confidence 01111111100100100 0000011 12358999999999999876654 5566 8877 9999999999976
Q ss_pred h
Q psy9141 157 S 157 (379)
Q Consensus 157 S 157 (379)
.
T Consensus 144 p 144 (493)
T 1m6i_A 144 P 144 (493)
T ss_dssp E
T ss_pred C
Confidence 5
No 151
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.50 E-value=1.5e-08 Score=100.38 Aligned_cols=132 Identities=16% Similarity=0.166 Sum_probs=74.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHh----CCCCce
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLA----HGIPMR 81 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~----~~~~~~ 81 (379)
++||+||||||+|+++|..|++.|++|+|||+.+... |...+... ..+..++....+++.+.. .+.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~G------G~~~~~g~-~psk~l~~~~~~~~~~~~~~~~~g~~~~ 74 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALG------GTCLNVGC-IPSKALLHATHLYHDAHANFARYGLMGG 74 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS------HHHHHHSH-HHHHHHHHHHHHHHHHHHTHHHHTEECG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcC------CcCCCcCc-HhHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4799999999999999999999999999999986542 11100000 112222222112222211 111110
Q ss_pred eeEEEecCCcEEEeeCCCCCc----------H--HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEE
Q psy9141 82 ARMIHGQNGKLREIPYDPVHN----------Q--VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLI 149 (379)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~----------~--~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlV 149 (379)
.. ...++..... . ....+..+++++.++.+. + +.+.+++.+. +|+..+ +++|.|
T Consensus 75 ------~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~~~~~~v~~~-~G~~~~-~~~d~l 140 (468)
T 2qae_A 75 ------EG---VTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF-E--TAHSIRVNGL-DGKQEM-LETKKT 140 (468)
T ss_dssp ------GG---CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE-E--ETTEEEEEET-TSCEEE-EEEEEE
T ss_pred ------CC---CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-e--eCCEEEEEec-CCceEE-EEcCEE
Confidence 00 0001100000 0 122223589999887542 3 4567888877 883333 999999
Q ss_pred EecCCCChH
Q psy9141 150 IGADGAYSG 158 (379)
Q Consensus 150 V~AdG~~S~ 158 (379)
|.|+|....
T Consensus 141 viAtG~~p~ 149 (468)
T 2qae_A 141 IIATGSEPT 149 (468)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCcC
Confidence 999997653
No 152
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.48 E-value=7.8e-07 Score=87.63 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=76.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+..... ..+...+.+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-----------~~~~~~~~l~--------------------- 215 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-----------MDLEVSRAAE--------------------- 215 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------SCHHHHHHHH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-----------cCHHHHHHHH---------------------
Confidence 57999999999999999999999999999988643210 1111111110
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..+. ..|++++++++|++++.+++++.+++. +|++ +++|.||.|+|..+.+.
T Consensus 216 -----------------~~l~-~~Gv~i~~~~~V~~i~~~~~~v~v~~~-~g~~---i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 216 -----------------RVFK-KQGLTIRTGVRVTAVVPEAKGARVELE-GGEV---LEADRVLVAVGRRPYTE 267 (455)
T ss_dssp -----------------HHHH-HHTCEEECSCCEEEEEEETTEEEEEET-TSCE---EEESEEEECSCEEECCT
T ss_pred -----------------HHHH-HCCCEEEECCEEEEEEEeCCEEEEEEC-CCeE---EEcCEEEECcCCCcCCC
Confidence 1122 248999999999999988888888887 8877 99999999999988653
No 153
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.48 E-value=2e-07 Score=93.01 Aligned_cols=48 Identities=15% Similarity=0.088 Sum_probs=38.7
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
+..|++++++++|++++.++....+.+. +|++ +++|+||.|.|..+.+
T Consensus 268 ~~~GV~v~~~~~v~~i~~~~~v~~v~~~-~g~~---i~aD~Vv~a~G~~p~~ 315 (493)
T 1y56_A 268 ERWGIDYVHIPNVKRVEGNEKVERVIDM-NNHE---YKVDALIFADGRRPDI 315 (493)
T ss_dssp HHHTCEEEECSSEEEEECSSSCCEEEET-TCCE---EECSEEEECCCEEECC
T ss_pred HhCCcEEEeCCeeEEEecCCceEEEEeC-CCeE---EEeCEEEECCCcCcCc
Confidence 3458999999999999876544446677 8877 9999999999988754
No 154
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.47 E-value=4e-07 Score=89.12 Aligned_cols=104 Identities=17% Similarity=0.220 Sum_probs=68.0
Q ss_pred cEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G--~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
+|||||||++|+++|..|++.+ ++|+|||+++... ..|.. ..+..........
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------------~~p~l----------~~v~~g~~~~~~i-- 58 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------------FTPAF----------PHLAMGWRKFEDI-- 58 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------------CGGGH----------HHHHHTCSCGGGS--
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------------cCccH----------HHHhcCCCCHHHh--
Confidence 7999999999999999999865 7999999876321 11111 1111111111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
..++.. ..+..+++++.+ +|++|+.+...| +++ +|++ +.+|+||.|+|...
T Consensus 59 --------~~~~~~------~~~~~gv~~i~~-~v~~Id~~~~~V--~~~-~g~~---i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 59 --------SVPLAP------LLPKFNIEFINE-KAESIDPDANTV--TTQ-SGKK---IEYDYLVIATGPKL 109 (430)
T ss_dssp --------EEESTT------TGGGGTEEEECS-CEEEEETTTTEE--EET-TCCE---EECSEEEECCCCEE
T ss_pred --------hhcHHH------HHHHCCcEEEEe-EEEEEECCCCEE--EEC-CCCE---EECCEEEEeCCCCc
Confidence 112222 122248888866 799998777654 456 8887 99999999999753
No 155
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.46 E-value=4.4e-07 Score=91.39 Aligned_cols=52 Identities=8% Similarity=-0.080 Sum_probs=45.1
Q ss_pred hcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHHHH
Q psy9141 107 EQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKC 162 (379)
Q Consensus 107 ~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr~~ 162 (379)
.+..+++++.++.++.++..++.+.+.+. ++++ +.+|.|+.|.|+...+-..
T Consensus 273 l~~~gi~~~~~~~v~~~~~~~~~~~v~~~-~~~~---~~~D~vLvAvGR~Pnt~~L 324 (542)
T 4b1b_A 273 MEEQGVMFKNGILPKKLTKMDDKILVEFS-DKTS---ELYDTVLYAIGRKGDIDGL 324 (542)
T ss_dssp HHHTTCEEEETCCEEEEEEETTEEEEEET-TSCE---EEESEEEECSCEEESCGGG
T ss_pred HHhhcceeecceEEEEEEecCCeEEEEEc-CCCe---EEEEEEEEcccccCCcccc
Confidence 34469999999999999999999999998 8877 8899999999999876543
No 156
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.46 E-value=1.1e-07 Score=93.89 Aligned_cols=130 Identities=13% Similarity=0.127 Sum_probs=73.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
++||+||||||+|+++|..|++.|++|+|||+.+... |...+... ..+..++....+++.+... ..++..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~G------G~~~~~g~-~p~k~l~~~~~~~~~~~~~---~~g~~~ 70 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALG------GTCLRVGC-IPSKALLETTERIYEAKKG---LLGAKV 70 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS------HHHHHHSH-HHHHHHHHHHHHHHHHHHC---CTTEEE
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCC------Cccceecc-hhHHHHHHHHHHHHHHhhh---cCCccc
Confidence 3799999999999999999999999999999986442 21110000 1233333333334443321 111111
Q ss_pred EecCCcEEEeeCCCCCcH------------HHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecC
Q psy9141 86 HGQNGKLREIPYDPVHNQ------------VELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGAD 153 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~------------~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~Ad 153 (379)
.. ...++...... ....+..+++++.++.+. .+.+.+++.+ +|++ +.+|.||.|+
T Consensus 71 ---~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~--~g~~---~~~d~lviAt 137 (455)
T 2yqu_A 71 ---KG--VELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF---LSERKVLVEE--TGEE---LEARYILIAT 137 (455)
T ss_dssp ---CC--EEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---SSSSEEEETT--TCCE---EEEEEEEECC
T ss_pred ---CC--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEee--CCEE---EEecEEEECC
Confidence 00 01111100000 112223589999887542 3455565543 4555 8999999999
Q ss_pred CCChH
Q psy9141 154 GAYSG 158 (379)
Q Consensus 154 G~~S~ 158 (379)
|..+.
T Consensus 138 G~~p~ 142 (455)
T 2yqu_A 138 GSAPL 142 (455)
T ss_dssp CEEEC
T ss_pred CCCCC
Confidence 97653
No 157
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.44 E-value=5.1e-07 Score=86.53 Aligned_cols=105 Identities=22% Similarity=0.246 Sum_probs=68.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.||+||||||+|+++|..|++.| +|+|||+.+.... .+. .+ + ..+. |. .....
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~-----~~~---~l-~---~~~~--g~--------~~~~~---- 61 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYY-----SKP---ML-S---HYIA--GF--------IPRNR---- 61 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCC-----CST---TH-H---HHHT--TS--------SCGGG----
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcc-----ccc---hh-H---HHHh--CC--------CCHHH----
Confidence 59999999999999999999999 9999999875321 110 01 1 0110 10 00000
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
+ .... ....+..+++++.+++|+.++.+...+ + . +|++ +++|.||.|+|...
T Consensus 62 --------~-~~~~---~~~~~~~~v~~~~g~~v~~id~~~~~V--~-~-~g~~---~~~d~lViATGs~p 113 (367)
T 1xhc_A 62 --------L-FPYS---LDWYRKRGIEIRLAEEAKLIDRGRKVV--I-T-EKGE---VPYDTLVLATGARA 113 (367)
T ss_dssp --------G-CSSC---HHHHHHHTEEEECSCCEEEEETTTTEE--E-E-SSCE---EECSEEEECCCEEE
T ss_pred --------h-ccCC---HHHHHhCCcEEEECCEEEEEECCCCEE--E-E-CCcE---EECCEEEECCCCCC
Confidence 0 0001 112223589999999999998765443 3 4 7776 99999999999754
No 158
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.41 E-value=7.8e-08 Score=90.53 Aligned_cols=38 Identities=29% Similarity=0.367 Sum_probs=33.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHh--CCCcEEEEccCCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAK--NQYEVNLYEAREDIR 42 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~--~G~~V~viE~~~~~~ 42 (379)
.++||+||||||+||++|+.|++ .|++|+|||+.+.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 35799999999999999999975 599999999987664
No 159
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.40 E-value=2.7e-07 Score=87.96 Aligned_cols=37 Identities=32% Similarity=0.542 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
+++||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPE 41 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCC
Confidence 4689999999999999999999999999999998644
No 160
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.37 E-value=9e-07 Score=85.17 Aligned_cols=110 Identities=16% Similarity=0.137 Sum_probs=67.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCcee
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G--~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~ 82 (379)
.++||+||||||+|+++|..|++.| .+|+|+|+.+.... .+. .++. ..........
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~-----~~~---~l~~--------------~~~~~~~~~~ 60 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSY-----SKP---MLST--------------GFSKNKDADG 60 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEE-----CGG---GGGG--------------TTTTTCCHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCcc-----Ccc---cccH--------------HHhCCCCHHH
Confidence 3589999999999999999999999 46899998752110 110 0000 0000000000
Q ss_pred eEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 83 RMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
. .. .. .....+..+++++.+++++.++.++..++ +. + .+ +.+|.||.|+|....
T Consensus 61 ~---------~~---~~---~~~~~~~~~v~~~~~~~v~~i~~~~~~v~--~~-~-~~---~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 61 L---------AM---AE---PGAMAEQLNARILTHTRVTGIDPGHQRIW--IG-E-EE---VRYRDLVLAWGAEPI 114 (384)
T ss_dssp H---------EE---EC---HHHHHHHTTCEEECSCCCCEEEGGGTEEE--ET-T-EE---EECSEEEECCCEEEC
T ss_pred h---------hc---cC---HHHHHHhCCcEEEeCCEEEEEECCCCEEE--EC-C-cE---EECCEEEEeCCCCcC
Confidence 0 00 00 02222335899999999999887655444 44 4 34 899999999998653
No 161
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.36 E-value=1.7e-06 Score=84.94 Aligned_cols=113 Identities=14% Similarity=0.220 Sum_probs=72.3
Q ss_pred cEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G--~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
+|+||||||+|+++|..|++.| .+|+|||+.+.... ++. .+ + ........
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~-----~~~---~l-~-------------~~~~~~~~------ 53 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF-----ANC---AL-P-------------YVIGEVVE------ 53 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB-----CGG---GH-H-------------HHHTTSSC------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC-----Ccc---hh-H-------------HHHcCCcc------
Confidence 6999999999999999999988 47999998764321 110 11 0 01000000
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
.....+ .. ..+...+..+++++.+++|+.++.+...+.+....+++..+ +.+|.||.|+|...
T Consensus 54 ----~~~~~~--~~--~~~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~-~~yd~lVIATGs~p 116 (437)
T 4eqs_A 54 ----DRRYAL--AY--TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFE-ESYDKLILSPGASA 116 (437)
T ss_dssp ----CGGGTB--CC--CHHHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEE-EECSEEEECCCEEE
T ss_pred ----chhhhh--hc--CHHHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEE-EEcCEEEECCCCcc
Confidence 000000 00 11223333589999999999999888888776542444445 89999999999764
No 162
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.35 E-value=1.2e-06 Score=87.16 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.+|||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 46899999999999999999999999999999854
No 163
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.35 E-value=3.3e-06 Score=83.43 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=75.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.... .+.+...+.+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----------~~~~~~~~~l---------------------- 213 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----------QFDPLLSATL---------------------- 213 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------TSCHHHHHHH----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----------ccCHHHHHHH----------------------
Confidence 4799999999999999999999999999998864321 0112111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCc-eeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNS-ETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~-~~~~i~adlVV~AdG~~S~v 159 (379)
...+. ..|++++++++|++++.+++++.+++. +|+ + +++|.||.|+|..+.+
T Consensus 214 ----------------~~~l~-~~gv~i~~~~~v~~i~~~~~~~~v~~~-~G~~~---i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 214 ----------------AENMH-AQGIETHLEFAVAALERDAQGTTLVAQ-DGTRL---EGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ----------------HHHHH-HTTCEEESSCCEEEEEEETTEEEEEET-TCCEE---EEESEEEECSCEEESC
T ss_pred ----------------HHHHH-HCCCEEEeCCEEEEEEEeCCeEEEEEe-CCcEE---EEcCEEEECCCCCcCC
Confidence 01122 258999999999999987777888888 888 5 9999999999998765
No 164
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.34 E-value=1.3e-06 Score=86.37 Aligned_cols=103 Identities=15% Similarity=0.141 Sum_probs=75.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.+...+.+
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l---------------------- 216 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-----------GDPETAALL---------------------- 216 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------SCHHHHHHH----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------cCHHHHHHH----------------------
Confidence 58999999999999999999999999999988643210 111111110
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccC--CceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTED--NSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~--G~~~~~i~adlVV~AdG~~S~vr 160 (379)
....+..|++++++++|++++.+++++.+++..+ |+..+ +++|+||.|+|..+.+.
T Consensus 217 -----------------~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 217 -----------------RRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEE-VVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp -----------------HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEE-EEESEEEECSCEEESCT
T ss_pred -----------------HHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeE-EEcCEEEECCCcccCCC
Confidence 1112225899999999999998877777776424 76334 99999999999987654
No 165
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.33 E-value=3.7e-07 Score=88.51 Aligned_cols=70 Identities=20% Similarity=0.215 Sum_probs=47.3
Q ss_pred CCCCC-CCcEEEECCChHHHHHHHHHHhC-CCcEEEEccCCCCCCCC----CC-CCcccc-------cccCHHHHHHHHH
Q psy9141 1 MKCNS-KKSVVIVGGGLVGSLSACMFAKN-QYEVNLYEAREDIRNSG----LS-EGKSIN-------LALSVRGREALRR 66 (379)
Q Consensus 1 M~~m~-~~dVvIVGaGpaGl~~A~~La~~-G~~V~viE~~~~~~~~~----~~-~g~~i~-------~al~~~~~~~l~~ 66 (379)
|..|+ ++||+|||||++||++|+.|++. |++|+|+|+++...... .. +|..++ ..-.+...+++++
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~ 80 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQ 80 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTT
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHH
Confidence 55453 78999999999999999999999 99999999997553210 00 121110 1124667778888
Q ss_pred CCCh
Q psy9141 67 IGLE 70 (379)
Q Consensus 67 lGl~ 70 (379)
+|++
T Consensus 81 ~g~~ 84 (399)
T 1v0j_A 81 FTDF 84 (399)
T ss_dssp TCCB
T ss_pred hhhh
Confidence 7764
No 166
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.33 E-value=6.3e-07 Score=87.93 Aligned_cols=66 Identities=24% Similarity=0.291 Sum_probs=47.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCC---CCC------cccccccCHHHHHHHHHCCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGL---SEG------KSINLALSVRGREALRRIGL 69 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~---~~g------~~i~~al~~~~~~~l~~lGl 69 (379)
|.++||+|||||++||++|+.|++.|++|+|+|+++....... ..| ........+...++++++|+
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~ 77 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGL 77 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999876542210 011 11100114567788888886
No 167
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.32 E-value=1.7e-06 Score=85.16 Aligned_cols=100 Identities=15% Similarity=0.094 Sum_probs=75.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.... .+.+...+.+.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------~~~~~~~~~l~--------------------- 215 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-----------SFDPMISETLV--------------------- 215 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------TSCHHHHHHHH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-----------hhhHHHHHHHH---------------------
Confidence 5899999999999999999999999999998764321 12222111110
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCe-EEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGN-VTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..+. ..|++++++++|++++.++++ +.+++. +|++ +++|.||.|+|..+.+.
T Consensus 216 -----------------~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~-~g~~---i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 216 -----------------EVMN-AEGPQLHTNAIPKAVVKNTDGSLTLELE-DGRS---ETVDCLIWAIGREPAND 268 (450)
T ss_dssp -----------------HHHH-HHSCEEECSCCEEEEEECTTSCEEEEET-TSCE---EEESEEEECSCEEESCT
T ss_pred -----------------HHHH-HCCCEEEeCCEEEEEEEeCCcEEEEEEC-CCcE---EEcCEEEECCCCCcCCC
Confidence 1111 248999999999999876544 778888 8876 99999999999988654
No 168
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.30 E-value=5.9e-07 Score=88.57 Aligned_cols=38 Identities=11% Similarity=0.294 Sum_probs=35.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
.++||+|||||++||++|+.|++.|++|+|+|+++.+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 46899999999999999999999999999999998765
No 169
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=8.6e-06 Score=80.10 Aligned_cols=103 Identities=16% Similarity=0.235 Sum_probs=73.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.+...+.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~-------------------- 218 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-----------FEKQMAAIIK-------------------- 218 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------SCHHHHHHHH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----------cCHHHHHHHH--------------------
Confidence 358999999999999999999999999999988643210 1111111110
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
..+. ..|++++++++|++++.+++++.+.+..+|+..+ +++|.||.|.|..+.+
T Consensus 219 ------------------~~l~-~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~-~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 219 ------------------KRLK-KKGVEVVTNALAKGAEEREDGVTVTYEANGETKT-IDADYVLVTVGRRPNT 272 (455)
T ss_dssp ------------------HHHH-HTTCEEEESEEEEEEEEETTEEEEEEEETTEEEE-EEESEEEECSCEEESC
T ss_pred ------------------HHHH-HCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeE-EEcCEEEECcCCCccc
Confidence 1122 2589999999999999877777766532343334 9999999999988754
No 170
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.23 E-value=1.1e-06 Score=88.03 Aligned_cols=54 Identities=11% Similarity=0.118 Sum_probs=39.8
Q ss_pred HhcCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 106 LEQYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 106 ~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
....+|.+|..++.|+.+..+++.++ +.....+...+ +.|+-||.|.|+...-+
T Consensus 220 ~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~-~~a~~VILsAGai~SP~ 274 (526)
T 3t37_A 220 VRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAE-VFADQIVLCAGALESPA 274 (526)
T ss_dssp HHTCTTEEEECSCEEEEEEEETTEEEEEEEEETTEEEE-EEEEEEEECSHHHHHHH
T ss_pred ccCCCCeEEEeCCEEEEEEecCCeEEEEEEEecCceEE-EeecceEEcccccCCcc
Confidence 44567999999999999999887654 33321444455 89999999999765444
No 171
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.22 E-value=6e-07 Score=89.88 Aligned_cols=39 Identities=31% Similarity=0.537 Sum_probs=35.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCC-CcEEEEccCCCCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQ-YEVNLYEAREDIR 42 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G-~~V~viE~~~~~~ 42 (379)
|+++||+|||||++||++|+.|++.| ++|+|+|+++.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 45689999999999999999999999 9999999998654
No 172
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.21 E-value=3.6e-06 Score=85.33 Aligned_cols=36 Identities=39% Similarity=0.426 Sum_probs=33.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCC-CcEEEEccCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQ-YEVNLYEARED 40 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G-~~V~viE~~~~ 40 (379)
.+||+||||||.|||.+|..|++.| .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999998 79999999875
No 173
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.21 E-value=6e-06 Score=79.66 Aligned_cols=104 Identities=19% Similarity=0.255 Sum_probs=66.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G--~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
.+|+|||||++|+++|..|++.+ .+|+|||+++..... + ++..+...........
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-------------p----------~~~~v~~g~~~~~~~~ 59 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-------------Y----------MSNEVIGGDRELASLR 59 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-------------T----------THHHHHHTSSCGGGGE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-------------c----------CHHHHhcCCCCHHHHh
Confidence 47999999999999999998875 589999987632110 1 1111111111111110
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
.++ ..+.. .+++++.+ +|++|+.+...+ .+. +|.+ +.+|.+|.|+|...
T Consensus 60 ----------~~~------~~~~~-~gv~~i~~-~v~~id~~~~~v--~~~-~g~~---i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 60 ----------VGY------DGLRA-HGIQVVHD-SALGIDPDKKLV--KTA-GGAE---FAYDRCVVAPGIDL 108 (401)
T ss_dssp ----------ECS------HHHHH-TTCEEECS-CEEEEETTTTEE--EET-TSCE---EECSEEEECCCEEE
T ss_pred ----------hCH------HHHHH-CCCEEEEe-EEEEEEccCcEE--Eec-ccce---eecceeeeccCCcc
Confidence 011 12222 58888765 688888766654 455 8887 99999999999754
No 174
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.20 E-value=4.8e-06 Score=82.60 Aligned_cols=99 Identities=21% Similarity=0.205 Sum_probs=74.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.... .+.+...+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------~~d~~~~~~l~--------------------- 233 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-----------KFDECIQNTIT--------------------- 233 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------TSCHHHHHHHH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-----------ccCHHHHHHHH---------------------
Confidence 5799999999999999999999999999998864421 11222211110
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCe--EEEEEccCC-ceeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGN--VTFYRTEDN-SETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~--v~v~~~~~G-~~~~~i~adlVV~AdG~~S~v 159 (379)
..+ +..|++++++++|++++.++++ +.+.+. +| ++ +++|.||.|.|..+.+
T Consensus 234 -----------------~~l-~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~-~G~~~---i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 234 -----------------DHY-VKEGINVHKLSKIVKVEKNVETDKLKIHMN-DSKSI---DDVDELIWTIGRKSHL 287 (479)
T ss_dssp -----------------HHH-HHHTCEEECSCCEEEEEECC-CCCEEEEET-TSCEE---EEESEEEECSCEEECC
T ss_pred -----------------HHH-HhCCeEEEeCCEEEEEEEcCCCcEEEEEEC-CCcEE---EEcCEEEECCCCCCcc
Confidence 111 2248999999999999876554 778888 88 55 9999999999988765
No 175
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.20 E-value=2e-05 Score=78.65 Aligned_cols=51 Identities=10% Similarity=0.008 Sum_probs=36.9
Q ss_pred HHhcCCCCeEEeCceEEEEEecCC--------eEEEEEc--cCCceeEEEeecEEEecCCCC
Q psy9141 105 ELEQYPDCNIYFQHKLINLDVNSG--------NVTFYRT--EDNSETKITDNQLIIGADGAY 156 (379)
Q Consensus 105 ~~~~~~gv~i~~~~~v~~i~~~~~--------~v~v~~~--~~G~~~~~i~adlVV~AdG~~ 156 (379)
..++.-+..|+++++|++++..+. .++|+.. .+|+..+ +.|+.||.|+|..
T Consensus 153 ~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~-~~ar~vVlatG~~ 213 (501)
T 4b63_A 153 WCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA-RRTRKVVIAIGGT 213 (501)
T ss_dssp HHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE-EEEEEEEECCCCE
T ss_pred HHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE-EEeCEEEECcCCC
Confidence 334445677999999999986542 4777765 1345556 8999999999964
No 176
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.20 E-value=5.6e-06 Score=82.15 Aligned_cols=101 Identities=13% Similarity=0.201 Sum_probs=76.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... +.+...+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-----------~~~~~~~~l--------------------- 232 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-----------ADRDLVKVW--------------------- 232 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------SCHHHHHHH---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----------cCHHHHHHH---------------------
Confidence 358999999999999999999999999999988644210 112111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccC----CceeEEEeecEEEecCCCChHHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTED----NSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~----G~~~~~i~adlVV~AdG~~S~vr 160 (379)
....+..|++++++++|++++.+++++.+++. + |++ +++|.||.|.|..+.+.
T Consensus 233 ------------------~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~-~~~~~g~~---~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 233 ------------------QKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFE-GANAPKEP---QRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp ------------------HHHHGGGEEEEECSCEEEEEEEETTEEEEEEE-SSSCCSSC---EEESCEEECCCEEECGG
T ss_pred ------------------HHHHHhcCCEEEECCEEEEEEEcCCeEEEEEe-ccCCCceE---EEcCEEEECcCCCcCCC
Confidence 11122358999999999999988777778777 6 666 89999999999987653
No 177
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.19 E-value=7.1e-07 Score=88.21 Aligned_cols=39 Identities=26% Similarity=0.210 Sum_probs=34.1
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|+.|+++||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 1 m~~m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 1 MTPMKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp ---CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCcccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 555667999999999999999999999999999999986
No 178
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.19 E-value=2.4e-06 Score=84.97 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=49.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCC---CCCC------cccccccCHHHHHHHHHCCChHH
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSG---LSEG------KSINLALSVRGREALRRIGLEDK 72 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~---~~~g------~~i~~al~~~~~~~l~~lGl~~~ 72 (379)
.+||+|||||++||++|+.|++.|++|+|+|+++...... ..+| ...-....+...++++++|+...
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 4799999999999999999999999999999998764210 0011 11100124678899999997643
No 179
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.17 E-value=9.3e-07 Score=87.63 Aligned_cols=36 Identities=22% Similarity=0.235 Sum_probs=33.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|.++||+||||||+|+++|+.|++.|++|+|||+..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 456899999999999999999999999999999764
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.16 E-value=1.1e-05 Score=79.01 Aligned_cols=100 Identities=21% Similarity=0.256 Sum_probs=71.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+..... .+.+...+.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l-------------------- 197 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------YLDKEFTDVL-------------------- 197 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TCCHHHHHHH--------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc----------cCCHHHHHHH--------------------
Confidence 4579999999999999999999999999999988643210 0111100000
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeE-EEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNV-TFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v-~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.+ +.+ .+.+ +|++ +++|.||.|.|..+.+
T Consensus 198 -------------------~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~--~~~~---i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 198 -------------------TEEMEANNITIATGETVERYEGD-GRVQKVVT--DKNA---YDADLVVVAVGVRPNT 248 (447)
T ss_dssp -------------------HHHHHTTTEEEEESCCEEEEECS-SBCCEEEE--SSCE---EECSEEEECSCEEESC
T ss_pred -------------------HHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE--CCCE---EECCEEEECcCCCCCh
Confidence 12223468999999999999876 433 3444 4555 9999999999988754
No 181
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.16 E-value=5.5e-06 Score=80.41 Aligned_cols=101 Identities=19% Similarity=0.167 Sum_probs=74.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+... .+ .+.+...+.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l------~~----~~~~~~~~~l--------------------- 191 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL------VR----VLGRRIGAWL--------------------- 191 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS------HH----HHCHHHHHHH---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc------hh----hcCHHHHHHH---------------------
Confidence 3589999999999999999999999999999886432 11 1112111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.++....+++. +|++ ++||+||.|.|..+.+
T Consensus 192 ------------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~-dg~~---i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 192 ------------------RGLLTELGVQVELGTGVVGFSGEGQLEQVMAS-DGRS---FVADSALICVGAEPAD 243 (410)
T ss_dssp ------------------HHHHHHHTCEEECSCCEEEEECSSSCCEEEET-TSCE---EECSEEEECSCEEECC
T ss_pred ------------------HHHHHHCCCEEEeCCEEEEEeccCcEEEEEEC-CCCE---EEcCEEEEeeCCeecH
Confidence 11112258999999999999876655567888 8987 9999999999998754
No 182
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.16 E-value=1e-05 Score=82.05 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhC-CCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKN-QYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 39 (379)
..||+||||||.|||.+|..|++. +.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 468999999999999999999975 89999999987
No 183
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.15 E-value=1.2e-05 Score=78.59 Aligned_cols=101 Identities=15% Similarity=0.237 Sum_probs=73.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. + .+.+...+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------~----~~~~~~~~~l~-------------------- 198 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE------R----VTAPPVSAFYE-------------------- 198 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT------T----TSCHHHHHHHH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------c----hhhHHHHHHHH--------------------
Confidence 35899999999999999999999999999998764421 1 11122111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEe--cCCeE-EEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDV--NSGNV-TFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~--~~~~v-~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
..+ +..|++++++++|++++. +++.+ .+.+. +|++ +.+|.||.|.|..+.+
T Consensus 199 ------------------~~l-~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~-~G~~---i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 199 ------------------HLH-REAGVDIRTGTQVCGFEMSTDQQKVTAVLCE-DGTR---LPADLVIAGIGLIPNC 252 (431)
T ss_dssp ------------------HHH-HHHTCEEECSCCEEEEEECTTTCCEEEEEET-TSCE---EECSEEEECCCEEECC
T ss_pred ------------------HHH-HhCCeEEEeCCEEEEEEeccCCCcEEEEEeC-CCCE---EEcCEEEECCCCCcCc
Confidence 111 124889999999999987 44555 57787 8877 9999999999987643
No 184
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.15 E-value=1.8e-06 Score=85.74 Aligned_cols=42 Identities=24% Similarity=0.278 Sum_probs=35.2
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCC-CcEEEEccCCCCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQ-YEVNLYEAREDIR 42 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G-~~V~viE~~~~~~ 42 (379)
|++++.+||+|||||++||++|+.|++.| .+|+|+|+++...
T Consensus 4 m~~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 4 MAELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp ---CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred CCcccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 33345689999999999999999999998 7999999997653
No 185
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.13 E-value=1.6e-05 Score=78.27 Aligned_cols=102 Identities=17% Similarity=0.193 Sum_probs=73.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... +.+...+.+.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~--------------------- 219 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-----------EDADVSKEIE--------------------- 219 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------SCHHHHHHHH---------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-----------cCHHHHHHHH---------------------
Confidence 58999999999999999999999999999988643210 1122111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
..+ +..|++++++++|++++.+++++.+.+..+|+..+ +.+|.||.|.|....+
T Consensus 220 -----------------~~l-~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~-~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 220 -----------------KQF-KKLGVTILTATKVESIADGGSQVTVTVTKDGVAQE-LKAEKVLQAIGFAPNV 273 (464)
T ss_dssp -----------------HHH-HHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEE-EEESEEEECSCEEECC
T ss_pred -----------------HHH-HHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEE-EEcCEEEECCCCCccC
Confidence 111 12489999999999998877667776642564334 9999999999988754
No 186
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.11 E-value=1.2e-06 Score=82.94 Aligned_cols=34 Identities=24% Similarity=0.485 Sum_probs=31.9
Q ss_pred cEEEECCChHHHHHHHHHHhCC------CcEEEEccCCCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQ------YEVNLYEAREDI 41 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G------~~V~viE~~~~~ 41 (379)
||+|||||++|+++|+.|+++| .+|+|+|+....
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 8999999999999999999998 999999998744
No 187
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.11 E-value=2.6e-06 Score=84.51 Aligned_cols=38 Identities=39% Similarity=0.549 Sum_probs=35.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
+.+||+|||||++||++|+.|++.|++|+|+|+.+.+.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPG 47 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 46899999999999999999999999999999997654
No 188
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.11 E-value=1.6e-05 Score=79.65 Aligned_cols=100 Identities=12% Similarity=0.193 Sum_probs=74.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+++|||||+.|+-+|..|++.|.+|+++|+.+..... +.+...+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-----------~~~~~~~~l---------------------- 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-----------KDNETRAYV---------------------- 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-----------CSHHHHHHH----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-----------ccHHHHHHH----------------------
Confidence 58999999999999999999999999999988643210 111111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCe----EEEEEccCCc-eeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGN----VTFYRTEDNS-ETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~----v~v~~~~~G~-~~~~i~adlVV~AdG~~S~vr 160 (379)
....+..|++++++++|++++.++++ +.+++. +|+ + ++||.||.|.|..+.+.
T Consensus 262 -----------------~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~-~G~~~---i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 262 -----------------LDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTP-NGEMR---IETDFVFLGLGEQPRSA 319 (523)
T ss_dssp -----------------HHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEET-TEEEE---EECSCEEECCCCEECCH
T ss_pred -----------------HHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEEC-CCcEE---EEcCEEEECcCCccCCc
Confidence 11122358999999999999876555 678887 886 4 99999999999988654
No 189
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.10 E-value=1.5e-06 Score=86.15 Aligned_cols=36 Identities=28% Similarity=0.292 Sum_probs=33.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|.++||+||||||+|+++|..|++.|++|+|||++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 346899999999999999999999999999999974
No 190
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.10 E-value=5e-06 Score=83.02 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+.+|||||||++|+.+|..|++.+++|+|||+++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 4579999999999999999999999999999875
No 191
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.10 E-value=2.5e-06 Score=82.24 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=46.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCC---CC--CCc-------ccccccCHHHHHHHHHCCCh
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSG---LS--EGK-------SINLALSVRGREALRRIGLE 70 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~---~~--~g~-------~i~~al~~~~~~~l~~lGl~ 70 (379)
+++||+|||||++|+++|..|++.|++|+|+|+++...... .. +|. .+-....+...++++++|.+
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~ 79 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEM 79 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhh
Confidence 35799999999999999999999999999999987654210 00 111 11012346677888888764
No 192
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.10 E-value=2.6e-06 Score=81.75 Aligned_cols=37 Identities=24% Similarity=0.545 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccC-CCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR-EDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~-~~~ 41 (379)
..+||+|||||++||++|+.|++.|++|+|+|++ +..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 4689999999999999999999999999999998 544
No 193
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.09 E-value=2.3e-05 Score=79.09 Aligned_cols=99 Identities=13% Similarity=0.183 Sum_probs=72.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+..... +.+...+.+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l---------------------- 198 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-----------VDREMAGFA---------------------- 198 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-----------SCHHHHHHH----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-----------cCHHHHHHH----------------------
Confidence 48999999999999999999999999999998643211 112111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEe-------------------cCCeEEEEEccCCceeEEEeec
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDV-------------------NSGNVTFYRTEDNSETKITDNQ 147 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~-------------------~~~~v~v~~~~~G~~~~~i~ad 147 (379)
....+..|++++++++|++++. .++++++.+. +|++ +++|
T Consensus 199 -----------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~g~~---i~~D 257 (565)
T 3ntd_A 199 -----------------HQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLS-NGEL---LETD 257 (565)
T ss_dssp -----------------HHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEET-TSCE---EEES
T ss_pred -----------------HHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEc-CCCE---EEcC
Confidence 1111224777888888888776 3567788887 8887 9999
Q ss_pred EEEecCCCChHH
Q psy9141 148 LIIGADGAYSGV 159 (379)
Q Consensus 148 lVV~AdG~~S~v 159 (379)
.||.|.|..+.+
T Consensus 258 ~vi~a~G~~p~~ 269 (565)
T 3ntd_A 258 LLIMAIGVRPET 269 (565)
T ss_dssp EEEECSCEEECC
T ss_pred EEEECcCCccch
Confidence 999999998654
No 194
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.08 E-value=2e-05 Score=77.98 Aligned_cols=104 Identities=17% Similarity=0.268 Sum_probs=73.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+..... +.+...+.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~-------------------- 231 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-----------MDGEVAKATQ-------------------- 231 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----------SCHHHHHHHH--------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----------cCHHHHHHHH--------------------
Confidence 358999999999999999999999999999998744211 1111111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEe--cCCeEEEEEcc--CCceeEEEeecEEEecCCCChHHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDV--NSGNVTFYRTE--DNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~--~~~~v~v~~~~--~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..+ +..|++++++++|++++. +++.+.+.+.+ +|+..+ +++|.||.|.|..+.+.
T Consensus 232 ------------------~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 232 ------------------KFL-KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQEN-LEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp ------------------HHH-HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEE-EEESEEEECSCEEECCT
T ss_pred ------------------HHH-HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceE-EECCEEEECCCCCcCCC
Confidence 112 225899999999999987 56666666541 233234 99999999999987654
No 195
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.08 E-value=3.2e-05 Score=75.94 Aligned_cols=99 Identities=12% Similarity=0.184 Sum_probs=74.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+++|||+|+.|+-+|..|++.|.+|+++|+.+..... .+.+...+.+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~d~~~~~~l---------------------- 195 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK----------YFDKEMVAEV---------------------- 195 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TCCHHHHHHH----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc----------cCCHHHHHHH----------------------
Confidence 47999999999999999999999999999988644211 0112211111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.+++++.+.+. +| + +++|.||.|.|....+
T Consensus 196 -----------------~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~-~g-~---i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 196 -----------------QKSLEKQAVIFHFEETVLGIEETANGIVLETS-EQ-E---ISCDSGIFALNLHPQL 246 (452)
T ss_dssp -----------------HHHHHTTTEEEEETCCEEEEEECSSCEEEEES-SC-E---EEESEEEECSCCBCCC
T ss_pred -----------------HHHHHHcCCEEEeCCEEEEEEccCCeEEEEEC-CC-E---EEeCEEEECcCCCCCh
Confidence 11222358999999999999977777777776 66 5 9999999999997644
No 196
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.08 E-value=2e-05 Score=77.96 Aligned_cols=101 Identities=10% Similarity=0.144 Sum_probs=72.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.... + .+.+...+.+
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~----~~~~~~~~~l---------------------- 226 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG------V----GIDMEISKNF---------------------- 226 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC------S----SCCHHHHHHH----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC------c----ccCHHHHHHH----------------------
Confidence 5799999999999999999999999999998864421 0 0111111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCe-EEEEEc----cCCceeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGN-VTFYRT----EDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~v~~~----~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.++++ +.+++. .++++ +++|.||.|.|..+.+
T Consensus 227 -----------------~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~---i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 227 -----------------QRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEV---ITCDVLLVCIGRRPFT 284 (474)
T ss_dssp -----------------HHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEE---EEESEEEECSCEEECC
T ss_pred -----------------HHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceE---EEcCEEEECcCCCcCC
Confidence 11122358999999999999887765 666641 14555 9999999999988754
No 197
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.08 E-value=2.6e-05 Score=77.70 Aligned_cols=101 Identities=14% Similarity=0.158 Sum_probs=74.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+..-. .+.+...+.+.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------~~d~~~~~~l~--------------------- 224 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-----------KFDESVINVLE--------------------- 224 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-----------TSCHHHHHHHH---------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-----------ccchhhHHHHH---------------------
Confidence 4799999999999999999999999999998764421 01122111110
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCC-eEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSG-NVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..+. ..|++++++++|++++.+++ .+.+.+. +|++ + +++|.||.|.|....+.
T Consensus 225 -----------------~~l~-~~gv~i~~~~~v~~i~~~~~~~~~v~~~-~g~~-~-~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 225 -----------------NDMK-KNNINIVTFADVVEIKKVSDKNLSIHLS-DGRI-Y-EHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp -----------------HHHH-HTTCEEECSCCEEEEEESSTTCEEEEET-TSCE-E-EEESEEEECCCBCCTTT
T ss_pred -----------------HHHH-hCCCEEEECCEEEEEEEcCCceEEEEEC-CCcE-E-EECCEEEECCCCCcCCC
Confidence 1122 25899999999999987654 4778888 8875 4 88999999999887653
No 198
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.07 E-value=2.9e-05 Score=76.21 Aligned_cols=100 Identities=18% Similarity=0.272 Sum_probs=73.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+..... .+.+...+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l---------------------- 197 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK----------YFDKEFTDIL---------------------- 197 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT----------TSCHHHHHHH----------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh----------hhhhhHHHHH----------------------
Confidence 57999999999999999999999999999988644210 0122211111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.+++++..... +|++ +++|.||.|.|....+
T Consensus 198 -----------------~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~---i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 198 -----------------AKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKE---IKSDIAILCIGFRPNT 249 (452)
T ss_dssp -----------------HHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCE---EEESEEEECCCEEECC
T ss_pred -----------------HHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCE---EECCEEEECcCCCCCH
Confidence 11112358999999999999876666654445 7766 9999999999988754
No 199
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.07 E-value=3e-05 Score=77.16 Aligned_cols=100 Identities=24% Similarity=0.293 Sum_probs=74.0
Q ss_pred CcEEEECCChHHHHHHHHHHh----CCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCcee
Q psy9141 7 KSVVIVGGGLVGSLSACMFAK----NQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRA 82 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~----~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~ 82 (379)
.+|+|||||+.|+-+|..|++ .|.+|+++++.+... ++ .+.+...+.+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~------~~----~l~~~~~~~~------------------ 232 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM------GK----ILPEYLSNWT------------------ 232 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT------TT----TSCHHHHHHH------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc------cc----cCCHHHHHHH------------------
Confidence 479999999999999999987 478999999775321 11 1222111111
Q ss_pred eEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 83 RMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.+++.+.+++. +|++ +.||+||.|.|..+.+
T Consensus 233 ---------------------~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~-dG~~---i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 233 ---------------------MEKVRREGVKVMPNAIVQSVGVSSGKLLIKLK-DGRK---VETDHIVAAVGLEPNV 284 (493)
T ss_dssp ---------------------HHHHHTTTCEEECSCCEEEEEEETTEEEEEET-TSCE---EEESEEEECCCEEECC
T ss_pred ---------------------HHHHHhcCCEEEeCCEEEEEEecCCeEEEEEC-CCCE---EECCEEEECCCCCccH
Confidence 11222358999999999999887777888888 8987 9999999999988653
No 200
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.05 E-value=3.3e-06 Score=81.58 Aligned_cols=67 Identities=25% Similarity=0.205 Sum_probs=46.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCC----CCCc-------ccccccCHHHHHHHHHCCChH
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGL----SEGK-------SINLALSVRGREALRRIGLED 71 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~----~~g~-------~i~~al~~~~~~~l~~lGl~~ 71 (379)
.++||+|||||++|+++|+.|++.|++|+|+|+++....... ..|. .+-..-.+...++++++|.|.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 105 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWR 105 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhcc
Confidence 357999999999999999999999999999999875532110 1111 110012356677888887653
No 201
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=9.3e-06 Score=80.02 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=71.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +.+...+.+.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~--------------------- 219 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-----------YDSELTAPVA--------------------- 219 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------SCHHHHHHHH---------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------cCHHHHHHHH---------------------
Confidence 58999999999999999999999999999988644210 1121111110
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..+ +..|++++++++|++++. + .+++... +|+..+ +++|.||.|.|..+.+.
T Consensus 220 -----------------~~l-~~~gv~i~~~~~v~~i~~-~-~v~v~~~-~G~~~~-i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 220 -----------------ESL-KKLGIALHLGHSVEGYEN-G-CLLANDG-KGGQLR-LEADRVLVAVGRRPRTK 271 (458)
T ss_dssp -----------------HHH-HHHTCEEETTCEEEEEET-T-EEEEECS-SSCCCE-ECCSCEEECCCEEECCS
T ss_pred -----------------HHH-HHCCCEEEECCEEEEEEe-C-CEEEEEC-CCceEE-EECCEEEECcCCCcCCC
Confidence 112 224899999999999986 3 3666644 573233 99999999999887543
No 202
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.05 E-value=2.4e-05 Score=77.94 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=75.1
Q ss_pred CcEEEECCChHHHHHHHHHHhC---CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN---QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~---G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
.+++|||||+.|+-+|..|++. |.+|+++|+.+..-. .+.+...+.+.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-----------~~d~~~~~~l~------------------ 242 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-----------GFDETIREEVT------------------ 242 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-----------TSCHHHHHHHH------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-----------ccCHHHHHHHH------------------
Confidence 4799999999999999999999 999999998764321 01121111110
Q ss_pred EEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCC-eEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 84 MIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSG-NVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..+ +..|++++++++|++++.+++ .+.+++. +|++ +++|.||.|.|..+.+.
T Consensus 243 --------------------~~l-~~~GV~i~~~~~v~~i~~~~~~~~~v~~~-~G~~---i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 243 --------------------KQL-TANGIEIMTNENPAKVSLNTDGSKHVTFE-SGKT---LDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp --------------------HHH-HHTTCEEEESCCEEEEEECTTSCEEEEET-TSCE---EEESEEEECSCEEECCG
T ss_pred --------------------HHH-HhCCCEEEeCCEEEEEEEcCCceEEEEEC-CCcE---EEcCEEEECCCCccccc
Confidence 112 225899999999999987654 4778888 8876 99999999999987654
No 203
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.03 E-value=2.7e-05 Score=76.89 Aligned_cols=101 Identities=25% Similarity=0.266 Sum_probs=76.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhC-CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN-QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~-G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
..+|+|||+|+.|+-+|..|++. |.+|+++|+.+..... .+.+...+.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l-------------------- 208 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG----------FTSKSLSQML-------------------- 208 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT----------TSCHHHHHHH--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc----------ccCHHHHHHH--------------------
Confidence 35899999999999999999999 9999999987643210 0111111111
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.+++.+++.+. +|++ +++|.||.|.|..+..
T Consensus 209 -------------------~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~-~g~~---i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 209 -------------------RHDLEKNDVVVHTGEKVVRLEGENGKVARVIT-DKRT---LDADLVILAAGVSPNT 260 (472)
T ss_dssp -------------------HHHHHHTTCEEECSCCEEEEEESSSBEEEEEE-SSCE---EECSEEEECSCEEECC
T ss_pred -------------------HHHHHhcCCEEEeCCEEEEEEccCCeEEEEEe-CCCE---EEcCEEEECCCCCcCH
Confidence 11122358999999999999987788888888 8887 9999999999997643
No 204
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.03 E-value=6.4e-05 Score=73.81 Aligned_cols=146 Identities=10% Similarity=0.099 Sum_probs=86.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChH--HHHhCCCCce
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLED--KLLAHGIPMR 81 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~--~l~~~~~~~~ 81 (379)
..+|+|||||.+|+-+|..|++. |.+|+++++.+..... .+..-..-...+...+.+..+.... .+........
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~--~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 304 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA--DDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTN 304 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC--CCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGT
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc--cCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccC
Confidence 45899999999999999999998 8999999998765321 1111111124455555665553111 1111100000
Q ss_pred eeEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEc--cCCceeEEEeecEEEecCCCChH
Q psy9141 82 ARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRT--EDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~--~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
....+ .+.....|... -+.......+++++.+++|++++.+++++.+++. .+|+..+ +++|+||.|+|....
T Consensus 305 -~~~~~--~~~~~~~~~~l-~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~-~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 305 -YSVVD--TDLIERIYGVF-YRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSV-ETYDAVILATGYERQ 378 (463)
T ss_dssp -SSCBC--HHHHHHHHHHH-HHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEE-EEESEEEECCCEECC
T ss_pred -CCcCC--HHHHHHHHHHH-HHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEE-EECCEEEEeeCCCCC
Confidence 00000 00000000000 0033344579999999999999998888777664 2566556 999999999997654
No 205
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=1.7e-05 Score=78.27 Aligned_cols=103 Identities=17% Similarity=0.295 Sum_probs=73.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+..... +.+...+.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-----------~~~~~~~~l~-------------------- 225 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-----------MDAEIRKQFQ-------------------- 225 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------SCHHHHHHHH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----------ccHHHHHHHH--------------------
Confidence 358999999999999999999999999999988644210 1121111110
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEcc--CCceeEEEeecEEEecCCCChHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTE--DNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~--~G~~~~~i~adlVV~AdG~~S~v 159 (379)
..+. ..|++++++++|++++.+++++.+.+.. +|+..+ +.+|.||.|.|..+.+
T Consensus 226 ------------------~~l~-~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 226 ------------------RSLE-KQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTI-IEADVVLVSAGRTPFT 281 (470)
T ss_dssp ------------------HHHH-HSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEE-EEESEEECCCCEEECC
T ss_pred ------------------HHHH-HcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceE-EECCEEEECCCCCcCC
Confidence 1122 2589999999999998777666666531 342233 9999999999998754
No 206
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.02 E-value=1.9e-06 Score=85.81 Aligned_cols=47 Identities=15% Similarity=0.144 Sum_probs=37.4
Q ss_pred CeEEeCceEEEEEecCCeEEEEEc-cCCceeEEEeecEEEecCCCChHH
Q psy9141 112 CNIYFQHKLINLDVNSGNVTFYRT-EDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 112 v~i~~~~~v~~i~~~~~~v~v~~~-~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
++++++++|++++.+++++.+.+. .+|+..+ +++|.||.|.|....+
T Consensus 229 V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~-i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 229 FYFDAKARVISTIEKEDAVEVIYFDKSGQKTT-ESFQYVLAATGRKANV 276 (492)
T ss_dssp SEEETTCEEEEEEECSSSEEEEEECTTCCEEE-EEESEEEECSCCEESC
T ss_pred cEEEECCEEEEEEEcCCEEEEEEEeCCCceEE-EECCEEEEeeCCccCC
Confidence 999999999999988877777764 1564344 8999999999987654
No 207
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.00 E-value=7.7e-06 Score=78.20 Aligned_cols=36 Identities=33% Similarity=0.451 Sum_probs=33.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
+||+|||||++|+.+|+.|++.|++|+|+|+++...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 499999999999999999999999999999987443
No 208
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.99 E-value=3.2e-05 Score=76.88 Aligned_cols=100 Identities=19% Similarity=0.187 Sum_probs=75.0
Q ss_pred CcEEEECCChHHHHHHHHHHhC---CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceee
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN---QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRAR 83 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~---G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~ 83 (379)
.+++|||||+.|+-+|..|++. |.+|+++|+.+.... .+.+...+.+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-----------~~d~~~~~~l------------------- 237 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-----------GFDSELRKQL------------------- 237 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-----------TSCHHHHHHH-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-----------ccCHHHHHHH-------------------
Confidence 5899999999999999999999 999999998864321 0111111111
Q ss_pred EEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCC-eEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 84 MIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSG-NVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
....+..|++++++++|++++.+++ .+.+++. +|++ +++|.||.|.|..+.+.
T Consensus 238 --------------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~-~G~~---i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 238 --------------------TEQLRANGINVRTHENPAKVTKNADGTRHVVFE-SGAE---ADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp --------------------HHHHHHTTEEEEETCCEEEEEECTTSCEEEEET-TSCE---EEESEEEECSCEEESCT
T ss_pred --------------------HHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEC-CCcE---EEcCEEEEccCCCcCcc
Confidence 1112235899999999999987764 4778888 8876 99999999999987653
No 209
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.99 E-value=4.8e-05 Score=73.72 Aligned_cols=97 Identities=15% Similarity=0.271 Sum_probs=70.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.... + .+.+...+.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~----~~~~~~~~~l--------------------- 193 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS------R----AAPATLADFV--------------------- 193 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------T----TSCHHHHHHH---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------c----ccCHHHHHHH---------------------
Confidence 35899999999999999999999999999998864421 0 0112111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++.+++|++++ + + .+++. +|++ +++|.||.|.|....+
T Consensus 194 ------------------~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~-~g~~---i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 194 ------------------ARYHAAQGVDLRFERSVTGSV-D-G--VVLLD-DGTR---IAADMVVVGIGVLAND 241 (408)
T ss_dssp ------------------HHHHHHTTCEEEESCCEEEEE-T-T--EEEET-TSCE---EECSEEEECSCEEECC
T ss_pred ------------------HHHHHHcCcEEEeCCEEEEEE-C-C--EEEEC-CCCE---EEcCEEEECcCCCccH
Confidence 111122589999999999998 3 3 56677 8877 9999999999987643
No 210
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.98 E-value=5.3e-05 Score=74.69 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=72.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+..... +.+...+.+.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~d~~~~~~l~--------------------- 222 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-----------LDEDVTNALV--------------------- 222 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------SCHHHHHHHH---------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-----------CCHHHHHHHH---------------------
Confidence 58999999999999999999999999999988643210 1111111100
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEcc-CCceeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTE-DNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~-~G~~~~~i~adlVV~AdG~~S~v 159 (379)
..+.+..|++++++++|++++.+++++.+.+.. +|+..+ +++|.||.|.|..+.+
T Consensus 223 -----------------~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~-i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 223 -----------------GALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRET-VTCEALLVSVGRRPFT 278 (468)
T ss_dssp -----------------HHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEE-EEESEEEECSCEEECC
T ss_pred -----------------HHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEE-EECCEEEECCCcccCC
Confidence 112023589999999999998877667666531 453234 9999999999998754
No 211
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.98 E-value=9.2e-05 Score=73.57 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=33.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 357999999999999999999999999999998755
No 212
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.96 E-value=4.4e-06 Score=79.97 Aligned_cols=36 Identities=33% Similarity=0.455 Sum_probs=33.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
+||+|||||++|+++|+.|++.|++|+|+|+++...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 699999999999999999999999999999987553
No 213
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.95 E-value=5.5e-06 Score=81.77 Aligned_cols=35 Identities=26% Similarity=0.264 Sum_probs=32.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+++||+||||||+|+++|..|++.|++|+|||+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46899999999999999999999999999999873
No 214
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.91 E-value=7.9e-06 Score=81.94 Aligned_cols=37 Identities=11% Similarity=0.230 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.++||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 78 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFL 78 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 4689999999999999999999999999999998743
No 215
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.91 E-value=8.1e-06 Score=80.48 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..+||+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 3579999999999999999999999999999998754
No 216
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.91 E-value=5.7e-06 Score=81.33 Aligned_cols=35 Identities=29% Similarity=0.291 Sum_probs=32.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.++||+||||||+|+++|..|++.|++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 35899999999999999999999999999999973
No 217
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=7.9e-06 Score=81.45 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
++||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3799999999999999999999999999999984
No 218
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.90 E-value=5.4e-05 Score=71.70 Aligned_cols=106 Identities=19% Similarity=0.230 Sum_probs=70.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|++|+-+|..|++.|.+|+++++.+..... ..+.. + .+.+...+.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~-~~d~~-~--~~~~~~~~~l---------------------- 220 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP-DADPS-V--RLSPYTRQRL---------------------- 220 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------CT-T--SCCHHHHHHH----------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC-CCCCC-c--cCCHHHHHHH----------------------
Confidence 47999999999999999999999999999987643210 00000 0 0111111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCC-CeEEeCceEEEEEecCCeEEEEEccCCceeEEEe-ecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPD-CNIYFQHKLINLDVNSGNVTFYRTEDNSETKITD-NQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~-adlVV~AdG~~S~v 159 (379)
....+..+ ++++.+++|++++.+++.+.+.+. +|++ +. +|.||.|.|.....
T Consensus 221 -----------------~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~-~g~~---~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 221 -----------------GNVIKQGARIEMNVHYTVKDIDFNNGQYHISFD-SGQS---VHTPHEPILATGFDATK 274 (369)
T ss_dssp -----------------HHHHHTTCCEEEECSCCEEEEEEETTEEEEEES-SSCC---EEESSCCEECCCBCGGG
T ss_pred -----------------HHHHhhCCcEEEecCcEEEEEEecCCceEEEec-CCeE---eccCCceEEeeccCCcc
Confidence 11112344 999999999999877777788888 8876 54 59999999987654
No 219
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.89 E-value=0.00013 Score=67.66 Aligned_cols=98 Identities=18% Similarity=0.163 Sum_probs=70.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.... .+...+. +
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------~~~~~~~---------l------------- 190 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------------EKILIKR---------L------------- 190 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------CHHHHHH---------H-------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------CHHHHHH---------H-------------
Confidence 5799999999999999999999999999998753310 0100000 0
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEE-EEEccC----CceeEEEeecEEEecCCCChH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVT-FYRTED----NSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~----G~~~~~i~adlVV~AdG~~S~ 158 (379)
....+..+++++++++|++++.+++++. +++. + |+..+ +.+|.||.|.|....
T Consensus 191 -----------------~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~~~g~~~~-i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 191 -----------------MDKVENGNIILHTNRTLEEVTGDQMGVTGVRLR-DTQNSDNIES-LDVAGLFVAIGHSPN 248 (320)
T ss_dssp -----------------HHHHHTSSEEEECSCEEEEEEECSSSEEEEEEE-CCTTCCCCEE-EECSEEEECSCEEES
T ss_pred -----------------HHhcccCCeEEEcCceeEEEEcCCCceEEEEEE-eccCCCceEE-EEcCEEEEEeCCCCC
Confidence 1112236899999999999987765543 5554 4 54345 999999999997653
No 220
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.89 E-value=8.7e-05 Score=69.12 Aligned_cols=96 Identities=17% Similarity=0.190 Sum_probs=70.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.... .+.
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~--------------------------~~~------------- 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA--------------------------STI------------- 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--------------------------CHH-------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC--------------------------CHH-------------
Confidence 35799999999999999999999999999998753310 000
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEE-EEEcc--CCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVT-FYRTE--DNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~--~G~~~~~i~adlVV~AdG~~S 157 (379)
-...+.+..|++++.++++++++.+++++. +++.+ +|+..+ +.+|.||.|.|...
T Consensus 214 ----------------~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p 271 (338)
T 3itj_A 214 ----------------MQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETD-LPVSGLFYAIGHTP 271 (338)
T ss_dssp ----------------HHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEE-EECSEEEECSCEEE
T ss_pred ----------------HHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEE-EEeCEEEEEeCCCC
Confidence 002333445899999999999998776443 55541 344445 99999999999764
No 221
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.88 E-value=8.5e-06 Score=83.47 Aligned_cols=38 Identities=32% Similarity=0.409 Sum_probs=34.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
.++||+|||||++|+++|+.|++.|++|+|||+.+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 36899999999999999999999999999999987554
No 222
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.87 E-value=7.9e-05 Score=73.75 Aligned_cols=100 Identities=17% Similarity=0.186 Sum_probs=70.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
...+|+|||||++|+-+|..|++.|.+|+++|+.+..... +.+...+.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l-------------------- 233 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-----------YDGDMAEYI-------------------- 233 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-----------SCHHHHHHH--------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-----------CCHHHHHHH--------------------
Confidence 3468999999999999999999999999999988643210 111111100
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.++....+.+ ++.+ +++|.||.|.|..+..
T Consensus 234 -------------------~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~--~~~~---i~~D~vi~a~G~~p~~ 284 (480)
T 3cgb_A 234 -------------------YKEADKHHIEILTNENVKAFKGNERVEAVET--DKGT---YKADLVLVSVGVKPNT 284 (480)
T ss_dssp -------------------HHHHHHTTCEEECSCCEEEEEESSBEEEEEE--TTEE---EECSEEEECSCEEESC
T ss_pred -------------------HHHHHHcCcEEEcCCEEEEEEcCCcEEEEEE--CCCE---EEcCEEEECcCCCcCh
Confidence 1112235899999999999987533223444 4445 9999999999988654
No 223
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.87 E-value=0.0001 Score=73.08 Aligned_cols=99 Identities=21% Similarity=0.246 Sum_probs=70.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... .+.+...+.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l--------------------- 242 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG----------YYDRDLTDLM--------------------- 242 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHH---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh----------HHHHHHHHHH---------------------
Confidence 458999999999999999999999999999988644210 0112111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEE-EEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVT-FYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~-v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++++++|++++.+ +.+. +.+ +|++ +++|.||.|.|....+
T Consensus 243 ------------------~~~l~~~GV~i~~~~~v~~i~~~-~~v~~v~~--~g~~---i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 243 ------------------AKNMEEHGIQLAFGETVKEVAGN-GKVEKIIT--DKNE---YDVDMVILAVGFRPNT 293 (490)
T ss_dssp ------------------HHHHHTTTCEEEETCCEEEEECS-SSCCEEEE--SSCE---EECSEEEECCCEEECC
T ss_pred ------------------HHHHHhCCeEEEeCCEEEEEEcC-CcEEEEEE--CCcE---EECCEEEECCCCCcCh
Confidence 11223368999999999999863 3332 444 5666 9999999999987654
No 224
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.86 E-value=0.00015 Score=66.87 Aligned_cols=97 Identities=14% Similarity=0.084 Sum_probs=70.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+... ..+. +
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------~~~~-------------~------------ 184 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-------------CAPI-------------T------------ 184 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-------------SCHH-------------H------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-------------CCHH-------------H------------
Confidence 3589999999999999999999999999999875331 0000 0
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeE-EEEEc--cCCceeEEEeecEEEecCCCChH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNV-TFYRT--EDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v-~v~~~--~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
...+.+..++++++++++++++.+++++ .+.+. .+|++.+ +.+|.||.|.|....
T Consensus 185 -----------------~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~ 242 (311)
T 2q0l_A 185 -----------------LEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRE-LVVPGFFIFVGYDVN 242 (311)
T ss_dssp -----------------HHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEE-EECSEEEECSCEEEC
T ss_pred -----------------HHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEE-EecCEEEEEecCccC
Confidence 0122223589999999999998775553 24433 1576445 999999999997643
No 225
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.85 E-value=9.5e-06 Score=80.56 Aligned_cols=37 Identities=38% Similarity=0.477 Sum_probs=34.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
.+||+|||||++||++|+.|++.|++|+|+|+.+...
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 5799999999999999999999999999999987553
No 226
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.84 E-value=9.6e-05 Score=68.19 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=69.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|++|+-+|..|++.|.+|+++++.+... ... .+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------~~~-------------~~------------- 185 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------------ADQ-------------VL------------- 185 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-------------SCH-------------HH-------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-------------ccH-------------HH-------------
Confidence 479999999999999999999999999999876331 000 00
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeE-EEEEc--cCCceeEEEeecEEEecCCCChH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNV-TFYRT--EDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v-~v~~~--~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
...+.+..+++++.++++++++.+++.+ .+++. .+|++.+ +.+|.||.|.|....
T Consensus 186 ----------------~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~ 243 (310)
T 1fl2_A 186 ----------------QDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHN-IELAGIFVQIGLLPN 243 (310)
T ss_dssp ----------------HHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEE-EECSEEEECSCEEES
T ss_pred ----------------HHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEE-EEcCEEEEeeCCccC
Confidence 0122333589999999999998766544 34443 1466455 899999999997643
No 227
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.82 E-value=9.5e-06 Score=79.93 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
+.++||+||||||+|+++|..|++.|++|+|||+.
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 34689999999999999999999999999999984
No 228
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.81 E-value=1.3e-05 Score=83.19 Aligned_cols=37 Identities=35% Similarity=0.478 Sum_probs=34.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.++||+||||||+|+++|+.|++.|++|+|||+.+..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3579999999999999999999999999999998754
No 229
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.81 E-value=1.1e-05 Score=80.29 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=31.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHh-CCCcEEEEcc
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAK-NQYEVNLYEA 37 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~-~G~~V~viE~ 37 (379)
.++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 46899999999999999999999 9999999994
No 230
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.80 E-value=0.00012 Score=69.18 Aligned_cols=98 Identities=20% Similarity=0.244 Sum_probs=70.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|++|+-+|..|++.|.+|+++++.+..... +. +..
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~-------------~~-------------~~~----------- 206 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH-------------GK-------------TAH----------- 206 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-------------SH-------------HHH-----------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-------------HH-------------HHH-----------
Confidence 47999999999999999999999999999987643210 00 000
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCe---EEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGN---VTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~---v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
.. ....+..+++++++++|++++.++++ +++... +|+..+ +++|.||.|.|....
T Consensus 207 ------------~l---~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~-~g~~~~-i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 207 ------------EV---ERARANGTIDVYLETEVASIEESNGVLTRVHLRSS-DGSKWT-VEADRLLILIGFKSN 264 (360)
T ss_dssp ------------SS---HHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEET-TCCEEE-EECSEEEECCCBCCS
T ss_pred ------------HH---HHHhhcCceEEEcCcCHHHhccCCCceEEEEEEec-CCCeEE-EeCCEEEECCCCCCC
Confidence 01 11122358999999999999887664 444434 775445 999999999997653
No 231
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.80 E-value=0.0002 Score=66.09 Aligned_cols=98 Identities=10% Similarity=0.114 Sum_probs=72.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .+ .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~-------------~~-------------~~------------ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-------------QP-------------IY------------ 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------CH-------------HH------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------CH-------------HH------------
Confidence 35799999999999999999999999999998764321 00 00
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEc--cCCceeEEEeecEEEecCCCChHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRT--EDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~--~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
...+.+..+++++.++++++++.++....+++. .+|+..+ +.+|.||.|.|.....
T Consensus 196 -----------------~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~ 253 (323)
T 3f8d_A 196 -----------------VETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKE-LNVNGVFIEIGFDPPT 253 (323)
T ss_dssp -----------------HHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECCCEECCH
T ss_pred -----------------HHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEE-EEcCEEEEEECCCCCh
Confidence 022333458999999999999887654446555 1377545 9999999999987643
No 232
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.79 E-value=1.5e-05 Score=80.39 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=33.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..+||++|||+|++|+.+|..|++.|++|+|+|+.+.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3568999999999999999999999999999999863
No 233
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.78 E-value=1.2e-05 Score=79.30 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHh-C------CCcEEEEccCCCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAK-N------QYEVNLYEAREDI 41 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~-~------G~~V~viE~~~~~ 41 (379)
|+.+||+||||||+|+.+|..|++ . |++|+|||+.+.+
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 446899999999999999999999 7 9999999998754
No 234
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.75 E-value=0.0003 Score=65.61 Aligned_cols=100 Identities=15% Similarity=0.113 Sum_probs=69.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .+...+.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~-------------~~~~~~~l--------------------- 197 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA-------------HEASVKEL--------------------- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS-------------CHHHHHHH---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc-------------cHHHHHHH---------------------
Confidence 35799999999999999999999999999998764321 01111000
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEc--cCCceeEEEeecEEEecCCCChH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRT--EDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~--~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
....+..+++++.++++++++.+++...+++. .+|+..+ +.+|.||.|.|..+.
T Consensus 198 ------------------~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 198 ------------------MKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELA-LEVDAVLILAGYITK 253 (335)
T ss_dssp ------------------HHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECCCEEEE
T ss_pred ------------------HhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEE-EecCEEEEeecCCCC
Confidence 11122358999999999999885442234332 2564344 999999999998764
No 235
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.74 E-value=0.0002 Score=66.58 Aligned_cols=96 Identities=15% Similarity=0.166 Sum_probs=68.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .+ .+
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------~~-------------~~------------- 193 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA-------------NK-------------VA------------- 193 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS-------------CH-------------HH-------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc-------------ch-------------HH-------------
Confidence 4799999999999999999999999999998753310 00 00
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEc--cCCceeEEEeecEEEecCCCChH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRT--EDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~--~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
...+.+..+++++++++++++..++....+.+. .+|+..+ +.+|.||.|.|....
T Consensus 194 ----------------~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 194 ----------------QARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSE-LATDGVFIFIGHVPN 250 (325)
T ss_dssp ----------------HHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECSCEEES
T ss_pred ----------------HHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEE-EEcCEEEEccCCCCC
Confidence 012223358999999999999875432234432 2676445 999999999997653
No 236
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.74 E-value=0.00024 Score=70.35 Aligned_cols=102 Identities=10% Similarity=0.072 Sum_probs=71.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++++..... .+.+...+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~------------~~d~~~~~~l---------------------- 231 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR------------GFDQQMSSLV---------------------- 231 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST------------TSCHHHHHHH----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc------------cCCHHHHHHH----------------------
Confidence 479999999999999999999999999999864211 1112211111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEec-CCeEEEEEcc--CCceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVN-SGNVTFYRTE--DNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~v~~~~--~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
....+..|+++++++++++++.. ++.+.+++.+ +|+..+ +.+|.||.|.|....+.
T Consensus 232 -----------------~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~-~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 232 -----------------TEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDT-GTFDTVLWAIGRVPETR 290 (488)
T ss_dssp -----------------HHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEE-EEESEEEECSCEEESCG
T ss_pred -----------------HHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEE-EECCEEEEcccCCcccC
Confidence 11112258999999999999874 4456666541 266545 89999999999876543
No 237
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.74 E-value=1.4e-05 Score=79.64 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHh-CCCcEEEEcc
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAK-NQYEVNLYEA 37 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~-~G~~V~viE~ 37 (379)
++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 238
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.71 E-value=0.00036 Score=68.87 Aligned_cols=102 Identities=13% Similarity=0.094 Sum_probs=72.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++++.+..-.. +.+...+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~d~~~~~~~---------------------- 234 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-----------FDSMISTNC---------------------- 234 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------SCHHHHHHH----------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-----------cCHHHHHHH----------------------
Confidence 57999999999999999999999999999987643210 112111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCe--EEEEEccC---Cce--eEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGN--VTFYRTED---NSE--TKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~--v~v~~~~~---G~~--~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++.+++|++++.++++ +.+.+. + |+. .+ +++|.||.|.|....+
T Consensus 235 -----------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~-~~~~g~~~g~~-~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 235 -----------------TEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTA-VPGRLPVMTMI-PDVDCLLWAIGRVPNT 295 (478)
T ss_dssp -----------------HHHHHHTTCEEETTEEEEEEEECSSSEEEEEEEC-CTTSCCEEEEE-EEESEEEECSCEEESC
T ss_pred -----------------HHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEc-cCCCCcccceE-EEcCEEEEeeccccCC
Confidence 11122258999999999999876655 667766 4 321 34 9999999999987654
Q ss_pred H
Q psy9141 160 R 160 (379)
Q Consensus 160 r 160 (379)
.
T Consensus 296 ~ 296 (478)
T 3dk9_A 296 K 296 (478)
T ss_dssp T
T ss_pred C
Confidence 3
No 239
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.71 E-value=0.00018 Score=72.96 Aligned_cols=98 Identities=17% Similarity=0.241 Sum_probs=71.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+..... +.+...+.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~-------------------- 235 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-----------IDYEMAAYVH-------------------- 235 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------SCHHHHHHHH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-----------CCHHHHHHHH--------------------
Confidence 357999999999999999999999999999987643211 1121111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
...+..|++++++++|++++.++++ +.+. +|++ +++|.||.|.|..+.+
T Consensus 236 -------------------~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~-~g~~---i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 236 -------------------EHMKNHDVELVFEDGVDALEENGAV--VRLK-SGSV---IQTDMLILAIGVQPES 284 (588)
T ss_dssp -------------------HHHHHTTCEEECSCCEEEEEGGGTE--EEET-TSCE---EECSEEEECSCEEECC
T ss_pred -------------------HHHHHcCCEEEECCeEEEEecCCCE--EEEC-CCCE---EEcCEEEEccCCCCCh
Confidence 1112258999999999999876665 4556 8877 9999999999987654
No 240
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.70 E-value=3e-05 Score=80.95 Aligned_cols=36 Identities=42% Similarity=0.606 Sum_probs=33.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.+||+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 579999999999999999999999999999998754
No 241
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.70 E-value=0.00036 Score=65.00 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=69.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .. .+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-------------~~-------------~~------------- 200 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA-------------SK-------------IM------------- 200 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------CH-------------HH-------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-------------cH-------------HH-------------
Confidence 4799999999999999999999999999998753310 00 00
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCC--eEE-EEEc--cCCceeEEEeecEEEecCCCChH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSG--NVT-FYRT--EDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~--~v~-v~~~--~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
.....+..++++++++++++++.+++ .+. +.+. .+|+..+ +.+|.||.|.|....
T Consensus 201 ----------------~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 201 ----------------QQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSD-LKVSGLFFAIGHEPA 260 (333)
T ss_dssp ----------------HHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEE-EECSEEEECSCEEES
T ss_pred ----------------HHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEE-EecCEEEEEeCCccc
Confidence 01222346899999999999987764 332 4433 1464445 999999999997653
No 242
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.70 E-value=2.2e-05 Score=79.99 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
..+||+||||||+|+++|..|++.|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 3589999999999999999999999999999984
No 243
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.70 E-value=0.00019 Score=70.69 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=73.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++++.+..... .+.+...+.+++
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~d~~~~~~l~~-------------------- 222 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT----------LEDQDIVNTLLS-------------------- 222 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------SCCHHHHHHHHH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC----------CCCHHHHHHHHh--------------------
Confidence 57999999999999999999999999999988644211 012221111110
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecC-CeEEEEEcc-CCceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNS-GNVTFYRTE-DNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~v~~~~-~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
.. .++++.+++|++++.++ +++.+.+.+ +|+..+ +++|.||.|.|....+.
T Consensus 223 -------------------~l---~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~-i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 223 -------------------IL---KLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKS-IFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp -------------------HH---CCCEECSCCEEEEEEEETTEEEEEECCTTSCCEE-EEESCEEECCCEEECCC
T ss_pred -------------------cC---EEEEEECCEEEEEEEcCCCcEEEEEEecCCceEE-EEcCEEEECcCCCcccc
Confidence 01 17788899999998877 788877762 466334 99999999999987654
No 244
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.68 E-value=3.2e-05 Score=76.33 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=38.7
Q ss_pred CCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 111 DCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 111 gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
+++|+++++|++|+.++++++|++. +|++ ++||.||.|.+...
T Consensus 228 ~~~i~~~~~V~~i~~~~~~v~v~~~-~g~~---~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPGGVTVKTE-DNSV---YSADYVMVSASLGV 270 (472)
T ss_dssp CTTEESSCCEEEEEECSSCEEEEET-TSCE---EEESEEEECSCHHH
T ss_pred ccEEEcCCEEEEEEEcCCcEEEEEC-CCCE---EEcCEEEEecCHHH
Confidence 5789999999999999899999998 8877 99999999998754
No 245
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.66 E-value=0.00025 Score=65.22 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=69.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .+. .+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~-------------~~~---~~---------------------- 189 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA-------------APS---TV---------------------- 189 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS-------------CHH---HH----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC-------------CHH---HH----------------------
Confidence 5799999999999999999999999999998764310 000 00
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCe---EEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGN---VTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~---v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
....+..++++++++++++++.++++ +++... +|+..+ +.+|.||.|.|...
T Consensus 190 -----------------~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~-~g~~~~-~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 190 -----------------EKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLK-DGSIRD-LNVPGIFTFVGLNV 244 (315)
T ss_dssp -----------------HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECT-TSCEEE-ECCSCEEECSCEEE
T ss_pred -----------------HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcC-CCCeEE-eecCeEEEEEcCCC
Confidence 11222468999999999999887754 444444 776445 99999999999754
No 246
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.64 E-value=0.0003 Score=68.89 Aligned_cols=97 Identities=25% Similarity=0.301 Sum_probs=68.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+..... .+.+...+.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l---------------------- 196 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR----------SFDKEVTDIL---------------------- 196 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHH----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh----------hcCHHHHHHH----------------------
Confidence 48999999999999999999999999999988644210 0111111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
....+.. ++++.++.+++++.++ ++..... +|++ +++|.||.|.|....
T Consensus 197 -----------------~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~-~g~~---i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 197 -----------------EEKLKKH-VNLRLQEITMKIEGEE-RVEKVVT-DAGE---YKAELVILATGIKPN 245 (449)
T ss_dssp -----------------HHHHTTT-SEEEESCCEEEEECSS-SCCEEEE-TTEE---EECSEEEECSCEEEC
T ss_pred -----------------HHHHHhC-cEEEeCCeEEEEeccC-cEEEEEe-CCCE---EECCEEEEeeCCccC
Confidence 1112224 8899999999987655 4433344 7766 999999999998754
No 247
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.62 E-value=4.2e-05 Score=78.88 Aligned_cols=37 Identities=30% Similarity=0.498 Sum_probs=34.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3579999999999999999999999999999998754
No 248
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.62 E-value=4.3e-05 Score=78.98 Aligned_cols=36 Identities=33% Similarity=0.472 Sum_probs=33.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.+||+||||||+|+.+|..|++.|++|+|||+.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 579999999999999999999999999999998754
No 249
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.60 E-value=0.00031 Score=65.71 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=68.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.... . .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~-----~--------~--------------------------- 194 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA-----S--------K--------------------------- 194 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS-----C--------T---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc-----c--------H---------------------------
Confidence 35799999999999999999999999999998753210 0 0
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCC--eEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSG--NVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~--~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
. -.....+..++++++++++++++.+++ ++.+....+|+..+ +.+|.||.|.|...
T Consensus 195 --------------~-~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p 252 (335)
T 2a87_A 195 --------------I-MLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETT-LPVTGVFVAIGHEP 252 (335)
T ss_dssp --------------T-HHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEE-ECCSCEEECSCEEE
T ss_pred --------------H-HHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEE-eecCEEEEccCCcc
Confidence 0 001222346899999999999987653 35554321454344 99999999999754
No 250
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.58 E-value=0.00022 Score=66.13 Aligned_cols=95 Identities=15% Similarity=0.183 Sum_probs=68.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .. .+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~-------------~~-------------~l~------------ 197 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC-------------EN-------------AYV------------ 197 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-------------CH-------------HHH------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-------------CH-------------HHH------------
Confidence 4799999999999999999999999999998753210 00 000
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCC---eEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSG---NVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~---~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
..+. ..++++++++++++++.+++ ++.+....+|+..+ +.+|.||.|.|....
T Consensus 198 -----------------~~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 198 -----------------QEIK-KRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKL-IETDGVFIYVGLIPQ 253 (319)
T ss_dssp -----------------HHHH-HTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEE-ECCSEEEECCCEEEC
T ss_pred -----------------HHHh-cCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEE-EecCEEEEeeCCccC
Confidence 1111 25889999999999987755 23343212576445 999999999997653
No 251
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.58 E-value=5.7e-05 Score=79.78 Aligned_cols=36 Identities=31% Similarity=0.511 Sum_probs=33.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.++|+|||||++||++|+.|++.|++|+|+|+.+.+
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 579999999999999999999999999999998754
No 252
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.52 E-value=0.00033 Score=68.41 Aligned_cols=95 Identities=11% Similarity=0.135 Sum_probs=67.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... .+ +...+.+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~--~d---------~~~~~~~---------------------- 194 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL--MD---------ADMNQPI---------------------- 194 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT--SC---------GGGGHHH----------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc--cc---------chhHHHH----------------------
Confidence 47999999999999999999999999999988654311 11 1100000
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~v 159 (379)
....+..+++++++++|++++. +. +.+. +|++ +++|+||.|.|+...+
T Consensus 195 -----------------~~~l~~~gV~i~~~~~v~~~~~--~~--v~~~-~g~~---~~~D~vl~a~G~~Pn~ 242 (437)
T 4eqs_A 195 -----------------LDELDKREIPYRLNEEINAING--NE--ITFK-SGKV---EHYDMIIEGVGTHPNS 242 (437)
T ss_dssp -----------------HHHHHHTTCCEEESCCEEEEET--TE--EEET-TSCE---EECSEEEECCCEEESC
T ss_pred -----------------HHHhhccceEEEeccEEEEecC--Ce--eeec-CCeE---EeeeeEEEEeceecCc
Confidence 1111224788888988888753 33 5566 8887 9999999999987643
No 253
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.51 E-value=0.00025 Score=67.60 Aligned_cols=94 Identities=19% Similarity=0.292 Sum_probs=67.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.... +.+...+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------~~~~~~~~l~--------------------- 190 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------LDEELSNMIK--------------------- 190 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------------CCHHHHHHHH---------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------------CCHHHHHHHH---------------------
Confidence 4799999999999999999999999999998864321 1111111110
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~vr 160 (379)
..+. ..|++++++++|++++ .++ +.+. +|+ +++|.||.|.|..+.+.
T Consensus 191 -----------------~~l~-~~gV~i~~~~~v~~i~--~~~--v~~~-~g~----i~~D~vi~a~G~~p~~~ 237 (367)
T 1xhc_A 191 -----------------DMLE-ETGVKFFLNSELLEAN--EEG--VLTN-SGF----IEGKVKICAIGIVPNVD 237 (367)
T ss_dssp -----------------HHHH-HTTEEEECSCCEEEEC--SSE--EEET-TEE----EECSCEEEECCEEECCH
T ss_pred -----------------HHHH-HCCCEEEcCCEEEEEE--eeE--EEEC-CCE----EEcCEEEECcCCCcCHH
Confidence 1122 2588999999999887 333 4556 764 78999999999887653
No 254
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.51 E-value=6.2e-05 Score=80.90 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=34.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
++||+||||||+|+++|..|++.|++|+|||+.+...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999987553
No 255
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.49 E-value=7.5e-05 Score=80.81 Aligned_cols=36 Identities=19% Similarity=0.496 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~ 41 (379)
.+||+||||||+|+++|..|++.|+ +|+|||+.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 4699999999999999999999999 79999998644
No 256
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.49 E-value=7.1e-05 Score=73.76 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=33.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC--CcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G--~~V~viE~~~~~ 41 (379)
.+||+||||||+|+.+|..|++.| ++|+|||+.+.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 579999999999999999999998 999999998755
No 257
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.49 E-value=4.2e-05 Score=76.90 Aligned_cols=34 Identities=32% Similarity=0.447 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
+||+||||||++|+.+|..|++ |.+|+|||+.+.
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 5899999999999999999999 999999999864
No 258
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.46 E-value=7.8e-05 Score=75.77 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=34.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHh-CCCcEEEEccCCCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAK-NQYEVNLYEAREDI 41 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~-~G~~V~viE~~~~~ 41 (379)
+.++|++|||+|++|+.+|..|++ .|.+|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 356899999999999999999999 79999999998654
No 259
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.45 E-value=7.2e-05 Score=74.59 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=33.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
+.++|++|||+|++|+.+|..|++.|++|+|+|+...
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3568999999999999999999999999999999873
No 260
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.42 E-value=0.00043 Score=69.58 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=32.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45899999999999999999999999999999975
No 261
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.40 E-value=0.00013 Score=70.23 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=32.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 47999999999999999999999999999998754
No 262
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.39 E-value=0.0014 Score=65.50 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=66.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||||+.|+-+|..|++.|.+|+++++..... .+.+...+.+
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~------------~~d~~~~~~~---------------------- 256 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR------------GFDQDMANKI---------------------- 256 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST------------TSCHHHHHHH----------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc------------cCCHHHHHHH----------------------
Confidence 469999999999999999999999999999752111 1112211111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecC----CeEEEE--EccCCc-eeEEEeecEEEecCCCChHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNS----GNVTFY--RTEDNS-ETKITDNQLIIGADGAYSGV 159 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~----~~v~v~--~~~~G~-~~~~i~adlVV~AdG~~S~v 159 (379)
....+..|++++.++++++++..+ +.+.++ .. +|. ..+ +.+|.||.|.|+...+
T Consensus 257 -----------------~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~-~g~~~~~-~~~D~vi~a~G~~p~~ 317 (519)
T 3qfa_A 257 -----------------GEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQST-NSEEIIE-GEYNTVMLAIGRDACT 317 (519)
T ss_dssp -----------------HHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEES-SSSCEEE-EEESEEEECSCEEESC
T ss_pred -----------------HHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEEC-CCcEEEE-EECCEEEEecCCcccC
Confidence 111122588899998888776533 344443 44 553 234 7899999999987654
No 263
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.38 E-value=0.0008 Score=67.66 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..+|+|||+|++|+-+|..|++.+.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 35899999999999999999999999999999985
No 264
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.36 E-value=0.00013 Score=72.75 Aligned_cols=37 Identities=14% Similarity=0.337 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
+.++|++|||+|++|+.+|..|++.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3468999999999999999999999999999999863
No 265
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.33 E-value=8.2e-05 Score=75.20 Aligned_cols=36 Identities=25% Similarity=0.295 Sum_probs=33.1
Q ss_pred CCcEEEECCChHHHHHHHHHHh-CCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAK-NQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~-~G~~V~viE~~~~~ 41 (379)
+||+||||||.+|+.+|..|++ .+.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999999 69999999998754
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.30 E-value=0.00077 Score=62.38 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=68.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+..... ... +
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~-------------~~~------------~------------ 196 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH-------------EHS------------V------------ 196 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC-------------HHH------------H------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc-------------HHH------------H------------
Confidence 357999999999999999999999999999987643110 000 0
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEc--cCCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRT--EDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~--~~G~~~~~i~adlVV~AdG~~S 157 (379)
..+. ..+++++.++++++++.+++...+.+. .+|+..+ +.+|.||.|.|...
T Consensus 197 ------------------~~l~-~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 197 ------------------ENLH-ASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEI-LEIDDLIVNYGFVS 250 (332)
T ss_dssp ------------------HHHH-HSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEE-EECSEEEECCCEEC
T ss_pred ------------------HHHh-cCCeEEEeCceeeEEecCCceEEEEEEecCCCceEE-EECCEEEEeeccCC
Confidence 1111 258899999999999877664444444 1334445 99999999999664
No 267
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.30 E-value=0.002 Score=65.34 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=66.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
-+|+|||||++|+-+|..|++.|.+|+++++..... .+.+...+.+.+
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~------------~~d~~~~~~~~~-------------------- 334 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSILLR------------GFDQQMAEKVGD-------------------- 334 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST------------TSCHHHHHHHHH--------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcC------------cCCHHHHHHHHH--------------------
Confidence 479999999999999999999999999999872111 011222111111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEec------C---CeEEEE--EccCCceeEEEeecEEEecCCC
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVN------S---GNVTFY--RTEDNSETKITDNQLIIGADGA 155 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~------~---~~v~v~--~~~~G~~~~~i~adlVV~AdG~ 155 (379)
.+. ..|+++++++.+++++.. + +++.+. +. +|++.+ +.+|.||.|.|.
T Consensus 335 ------------------~l~-~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~-~~~D~vi~a~G~ 393 (598)
T 2x8g_A 335 ------------------YME-NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYT-DGKKFE-EEFETVIFAVGR 393 (598)
T ss_dssp ------------------HHH-HTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEET-TSCEEE-EEESEEEECSCE
T ss_pred ------------------HHH-hCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeC-CCcEEe-ccCCEEEEEeCC
Confidence 011 137778888777776532 1 445443 45 787644 569999999998
Q ss_pred ChHH
Q psy9141 156 YSGV 159 (379)
Q Consensus 156 ~S~v 159 (379)
...+
T Consensus 394 ~p~~ 397 (598)
T 2x8g_A 394 EPQL 397 (598)
T ss_dssp EECG
T ss_pred cccc
Confidence 8655
No 268
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.30 E-value=0.00092 Score=66.83 Aligned_cols=95 Identities=18% Similarity=0.192 Sum_probs=69.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.... . +.+
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~-------------~-------------~~l------------- 396 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA-------------D-------------QVL------------- 396 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS-------------C-------------HHH-------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc-------------C-------------HHH-------------
Confidence 4799999999999999999999999999998753310 0 000
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeE-EEEEc--cCCceeEEEeecEEEecCCCCh
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNV-TFYRT--EDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v-~v~~~--~~G~~~~~i~adlVV~AdG~~S 157 (379)
+..+.+..|++++.+++++++..+++++ .+.+. .+|++.+ +.+|.||.|.|...
T Consensus 397 ----------------~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 397 ----------------QDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHS-VALAGIFVQIGLLP 453 (521)
T ss_dssp ----------------HHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEE-EECSEEEECCCEEE
T ss_pred ----------------HHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEE-EEcCEEEECcCCCC
Confidence 0122233589999999999998766554 24443 1466555 89999999999654
No 269
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.29 E-value=0.00093 Score=66.47 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=62.9
Q ss_pred cEEEECCChHHHHHHHHHHhC--------------CCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHH
Q psy9141 8 SVVIVGGGLVGSLSACMFAKN--------------QYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKL 73 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~--------------G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l 73 (379)
.++|||||++|+-+|..|+.. ..+|+++|..+..-.. +.+...+.+
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~-----------~~~~~~~~~--------- 278 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM-----------FEKKLSSYA--------- 278 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-----------SCHHHHHHH---------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-----------CCHHHHHHH---------
Confidence 599999999999999998754 2578888877644211 112111111
Q ss_pred HhCCCCceeeEEEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCce--eEEEeecEEEe
Q psy9141 74 LAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSE--TKITDNQLIIG 151 (379)
Q Consensus 74 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~--~~~i~adlVV~ 151 (379)
....+..||+++++++|++++.+......... ||+. .+ +.||+||-
T Consensus 279 ------------------------------~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~-dg~~~~~~-i~ad~viw 326 (502)
T 4g6h_A 279 ------------------------------QSHLENTSIKVHLRTAVAKVEEKQLLAKTKHE-DGKITEET-IPYGTLIW 326 (502)
T ss_dssp ------------------------------HHHHHHTTCEEETTEEEEEECSSEEEEEEECT-TSCEEEEE-EECSEEEE
T ss_pred ------------------------------HHHHHhcceeeecCceEEEEeCCceEEEEEec-Ccccceee-eccCEEEE
Confidence 11112258899999999988643323333445 6642 34 99999999
Q ss_pred cCCCC
Q psy9141 152 ADGAY 156 (379)
Q Consensus 152 AdG~~ 156 (379)
|.|..
T Consensus 327 a~Gv~ 331 (502)
T 4g6h_A 327 ATGNK 331 (502)
T ss_dssp CCCEE
T ss_pred ccCCc
Confidence 99964
No 270
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.27 E-value=0.00016 Score=72.77 Aligned_cols=37 Identities=30% Similarity=0.434 Sum_probs=33.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhC-CCcEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKN-QYEVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~-G~~V~viE~~~~~ 41 (379)
..+|++|||+|++|+.+|..|++. |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 358999999999999999999998 8999999998644
No 271
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.20 E-value=0.0017 Score=58.99 Aligned_cols=86 Identities=6% Similarity=-0.005 Sum_probs=62.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEE
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMI 85 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 85 (379)
..+|+|||+|+.|+-+|..|++.| +|+++++.+.. +.....
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~--------------~~~~~~------------------------ 181 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE--------------PDADQH------------------------ 181 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC--------------CCHHHH------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC--------------CCHHHH------------------------
Confidence 458999999999999999999999 99999876420 111111
Q ss_pred EecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 86 HGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
..+ +..+++++. ++|++++.++ .+.+. +|++ +.+|.||.|.|...
T Consensus 182 ------------------~~l-~~~gv~i~~-~~v~~i~~~~---~v~~~-~g~~---~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 182 ------------------ALL-AARGVRVET-TRIREIAGHA---DVVLA-DGRS---IALAGLFTQPKLRI 226 (297)
T ss_dssp ------------------HHH-HHTTCEEEC-SCEEEEETTE---EEEET-TSCE---EEESEEEECCEEEC
T ss_pred ------------------HHH-HHCCcEEEc-ceeeeeecCC---eEEeC-CCCE---EEEEEEEEccCccc
Confidence 111 124778874 7888886543 56677 8887 99999999999764
No 272
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.17 E-value=0.00015 Score=74.84 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC--------CcEEEEccCC-CC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQ--------YEVNLYEARE-DI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G--------~~V~viE~~~-~~ 41 (379)
..+|+|||||++||++|+.|++.| ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999998 9999999987 44
No 273
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.12 E-value=0.0013 Score=66.23 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=32.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..+|+|||+|.+|+-+|..|++.+.+|++++|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45899999999999999999999999999999985
No 274
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.09 E-value=0.00052 Score=69.97 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=34.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
+|||+|||+|+.|+.+|..|++.|.+|++|||++..+
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYG 44 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCccc
Confidence 6999999999999999999999999999999998543
No 275
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.04 E-value=0.0018 Score=63.61 Aligned_cols=35 Identities=17% Similarity=0.094 Sum_probs=31.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 35799999999999999999999999999998753
No 276
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.92 E-value=0.00083 Score=54.49 Aligned_cols=33 Identities=9% Similarity=0.081 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999875
No 277
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.92 E-value=0.012 Score=53.95 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 357999999999999999999999999999987543
No 278
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.88 E-value=0.0011 Score=54.85 Aligned_cols=37 Identities=30% Similarity=0.349 Sum_probs=33.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
....|+|+|+|..|..+|..|.+.|++|+++|+++..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 3468999999999999999999999999999987643
No 279
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.82 E-value=0.0056 Score=63.28 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=67.6
Q ss_pred CcEEEEC--CChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeE
Q psy9141 7 KSVVIVG--GGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARM 84 (379)
Q Consensus 7 ~dVvIVG--aGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~ 84 (379)
.+|+||| +|++|+-+|..|++.|.+|+++++.+..... . ..+. ...
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~------~----~~~~---------~~~------------- 571 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW------T----NNTF---------EVN------------- 571 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG------G----GGGT---------CHH-------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc------c----ccch---------hHH-------------
Confidence 3699999 9999999999999999999999987643210 0 0000 000
Q ss_pred EEecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 85 IHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
.-....+..|++++.+++|++++. +++.+....+|+..+ +.+|.||.|.|..+.
T Consensus 572 -----------------~l~~~l~~~GV~i~~~~~V~~i~~--~~~~v~~~~~~~~~~-i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 572 -----------------RIQRRLIENGVARVTDHAVVAVGA--GGVTVRDTYASIERE-LECDAVVMVTARLPR 625 (690)
T ss_dssp -----------------HHHHHHHHTTCEEEESEEEEEEET--TEEEEEETTTCCEEE-EECSEEEEESCEEEC
T ss_pred -----------------HHHHHHHHCCCEEEcCcEEEEEEC--CeEEEEEccCCeEEE-EECCEEEECCCCCCC
Confidence 001122235899999999999974 345554321333334 999999999998754
No 280
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.78 E-value=0.0056 Score=63.02 Aligned_cols=46 Identities=4% Similarity=0.005 Sum_probs=36.4
Q ss_pred cCCCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCChH
Q psy9141 108 QYPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 108 ~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S~ 158 (379)
+..|++++.+++|++++ +++++++ . +|+..+ +.+|.||.|.|....
T Consensus 584 ~~~GV~v~~~~~v~~i~--~~~v~~~-~-~G~~~~-i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 584 LSRGVKMIPGVSYQKID--DDGLHVV-I-NGETQV-LAVDNVVICAGQEPN 629 (671)
T ss_dssp HHTTCEEECSCEEEEEE--TTEEEEE-E-TTEEEE-ECCSEEEECCCEEEC
T ss_pred HhcCCEEEeCcEEEEEe--CCeEEEe-c-CCeEEE-EeCCEEEECCCcccc
Confidence 34699999999999987 3466665 5 885445 999999999998764
No 281
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.67 E-value=0.0023 Score=52.74 Aligned_cols=35 Identities=9% Similarity=0.170 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45689999999999999999999999999999874
No 282
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.67 E-value=0.0092 Score=58.55 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHH--------------------hCCC-cEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFA--------------------KNQY-EVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La--------------------~~G~-~V~viE~~~~~ 41 (379)
..+|+|||+|.+|+-+|..|+ +.|. +|+|++++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 358999999999999999999 6788 79999988643
No 283
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.63 E-value=0.0052 Score=59.92 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCc-EEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYE-VNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~-V~viE~~~ 39 (379)
..+|+|||+|++|+-+|..|++.|.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 35799999999999999999999999 99999864
No 284
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.62 E-value=0.002 Score=51.93 Aligned_cols=39 Identities=21% Similarity=0.173 Sum_probs=31.1
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|++++...|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 1 m~~~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 1 MGRIKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCCCcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 443333479999999999999999999999999999864
No 285
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.50 E-value=0.0062 Score=65.38 Aligned_cols=93 Identities=12% Similarity=0.112 Sum_probs=67.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
..|+|||+|+.|+-+|..|++.|.+|+|+|+.+.. .+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~---------------~~~--------------------------- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSI---------------SAA--------------------------- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC---------------CHH---------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc---------------chh---------------------------
Confidence 47999999999999999999999999999987532 010
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEec-CCeE-EEEEcc------CCceeEEEeecEEEecCCCChH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVN-SGNV-TFYRTE------DNSETKITDNQLIIGADGAYSG 158 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~v-~v~~~~------~G~~~~~i~adlVV~AdG~~S~ 158 (379)
. ..+. ..|+++++++.+++++.+ ++++ .+++.+ +|+..+ +++|.||.|.|....
T Consensus 323 -------------~---~~l~-~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~-i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 323 -------------A---AQAV-ADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQR-FEADVLAVAGGFNPV 384 (965)
T ss_dssp -------------H---HHHH-HTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEE-EECSEEEEECCEEEC
T ss_pred -------------H---HHHH-hCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEE-EEcCEEEECCCcCcC
Confidence 0 1122 258999999999999874 3433 344441 153344 999999999998764
Q ss_pred H
Q psy9141 159 V 159 (379)
Q Consensus 159 v 159 (379)
+
T Consensus 385 ~ 385 (965)
T 2gag_A 385 V 385 (965)
T ss_dssp C
T ss_pred h
Confidence 3
No 286
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.47 E-value=0.01 Score=64.13 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
+|+|||||.+|+-+|..+++.|. +|+|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 89999999999999999999997 899999875
No 287
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.47 E-value=0.0025 Score=51.12 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.+|+|||+|..|..+|..|++.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999764
No 288
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.38 E-value=0.0044 Score=50.24 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=31.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
-+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999998863
No 289
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.37 E-value=0.0027 Score=59.16 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..+|+|||+|++|+-+|..|++.| +|+++.+.+
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 358999999999999999999999 799999874
No 290
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.35 E-value=0.0048 Score=60.51 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~ 41 (379)
..+|+|||||.+|+-+|..+.+.|. +|+++++++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3579999999999999999999998 59999988644
No 291
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.31 E-value=0.003 Score=58.95 Aligned_cols=40 Identities=38% Similarity=0.617 Sum_probs=31.8
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
|+.|....|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 1 m~~~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCCCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6555556899999999999999999999999999998753
No 292
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.12 E-value=0.0052 Score=56.21 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 293
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.09 E-value=0.0046 Score=56.94 Aligned_cols=35 Identities=20% Similarity=0.416 Sum_probs=32.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 47999999999999999999999999999988644
No 294
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.06 E-value=0.0048 Score=57.43 Aligned_cols=39 Identities=38% Similarity=0.635 Sum_probs=31.2
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|+......|.|||||..|...|..++.+|++|+++|.++
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 554445689999999999999999999999999999765
No 295
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.95 E-value=0.0058 Score=47.26 Aligned_cols=33 Identities=21% Similarity=0.489 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQ-YEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G-~~V~viE~~~ 39 (379)
..|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999999875
No 296
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.87 E-value=0.034 Score=54.41 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhC--------------------CC-cEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN--------------------QY-EVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~--------------------G~-~V~viE~~~~~ 41 (379)
..+|+|||+|.+|+-+|..|++. |. +|+|++++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 35799999999999999999974 64 89999988643
No 297
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.78 E-value=0.008 Score=50.91 Aligned_cols=34 Identities=24% Similarity=0.168 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhC-CCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKN-QYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 39 (379)
...|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 34799999999999999999999 99999999875
No 298
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.76 E-value=0.011 Score=54.97 Aligned_cols=36 Identities=25% Similarity=0.536 Sum_probs=32.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
|+...|.|||+|..|..+|..|++.|+ +|+++|..+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 555689999999999999999999999 999999873
No 299
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.43 E-value=0.013 Score=55.42 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..+|.|||+|-.|.++|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4589999999999999999999999999999764
No 300
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.40 E-value=0.015 Score=54.36 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
.+|.|||+|-.|.++|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999864
No 301
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.37 E-value=0.015 Score=56.84 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+...|+|||.|.+|+++|..|+++|++|++.|+++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34689999999999999999999999999999875
No 302
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.32 E-value=0.016 Score=53.91 Aligned_cols=33 Identities=21% Similarity=0.461 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.+|+|||+|-.|.++|..|++.|++|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 379999999999999999999999999998763
No 303
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.28 E-value=0.015 Score=54.12 Aligned_cols=39 Identities=26% Similarity=0.361 Sum_probs=32.1
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
|.+|+..+|+|||||-+|.++|..|+..|+ ++.++|.++
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 555667899999999999999999999885 899999763
No 304
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.26 E-value=0.014 Score=50.95 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999999999999875
No 305
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.24 E-value=0.018 Score=52.98 Aligned_cols=33 Identities=36% Similarity=0.486 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999875
No 306
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.10 E-value=0.023 Score=53.18 Aligned_cols=33 Identities=27% Similarity=0.588 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
..|+|||||-.|..+|..|++.|+ +|+++|.++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 589999999999999999999998 999999875
No 307
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.07 E-value=0.019 Score=56.60 Aligned_cols=39 Identities=26% Similarity=0.396 Sum_probs=32.5
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
|+ |+...|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 1 Ms-m~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 1 MS-LNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp ----CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CC-CCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 44 3345799999999999999999999999999998763
No 308
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.01 E-value=0.026 Score=52.72 Aligned_cols=33 Identities=27% Similarity=0.591 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
..|+|||||..|..+|..|++.|+ +|+++|.++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999999 999999875
No 309
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.99 E-value=0.02 Score=53.02 Aligned_cols=31 Identities=23% Similarity=0.468 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
+|+|||+|-.|.++|..|++.|++|++++|+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 6999999999999999999999999999875
No 310
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.90 E-value=0.057 Score=51.63 Aligned_cols=40 Identities=5% Similarity=0.022 Sum_probs=32.6
Q ss_pred CCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 110 PDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 110 ~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
.|++++++++|++++.+ + +.++ +|++ +++|+||.|.|...
T Consensus 231 ~gV~~~~~~~v~~i~~~--~--v~~~-~g~~---~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 231 LGIKLVHNFKIKEIREH--E--IVDE-KGNT---IPADITILLPPYTG 270 (409)
T ss_dssp HTCEEECSCCEEEECSS--E--EEET-TSCE---EECSEEEEECCEEC
T ss_pred CCCEEEcCCceEEECCC--e--EEEC-CCCE---EeeeEEEECCCCCc
Confidence 48899999999988643 3 5667 8887 99999999999765
No 311
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.88 E-value=0.027 Score=52.32 Aligned_cols=33 Identities=24% Similarity=0.591 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
..|.|||+|-.|..+|..|++.|+ +|+++|+++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999875
No 312
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.86 E-value=0.022 Score=53.45 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..+|.|||+|-.|...|..|++.|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3589999999999999999999999999998763
No 313
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.84 E-value=0.033 Score=51.85 Aligned_cols=33 Identities=24% Similarity=0.629 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
..|+|||||-.|..+|..|+..|+ +|+++|.++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999875
No 314
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.79 E-value=0.025 Score=52.13 Aligned_cols=34 Identities=21% Similarity=0.044 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999998764
No 315
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.79 E-value=0.023 Score=56.01 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
...|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999875
No 316
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.71 E-value=0.033 Score=48.99 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=31.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
.+...|+|||||.+|...|..|.+.|.+|+|++..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34568999999999999999999999999999854
No 317
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.69 E-value=0.025 Score=55.25 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=31.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
+|.|||+|..|+.+|..|++.|++|+++|+++.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 799999999999999999999999999998763
No 318
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.69 E-value=0.026 Score=51.85 Aligned_cols=32 Identities=25% Similarity=0.425 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|..|..+|..|++.|++|+++++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 69999999999999999999999999998753
No 319
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.66 E-value=0.034 Score=50.38 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 59999999999999999999999999999875
No 320
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.65 E-value=0.028 Score=54.74 Aligned_cols=36 Identities=28% Similarity=0.350 Sum_probs=32.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
...|+|||.|++|+++|..|+++|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987654
No 321
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.60 E-value=0.13 Score=49.73 Aligned_cols=44 Identities=9% Similarity=0.043 Sum_probs=30.7
Q ss_pred CCCeEEeCceEEEEEecCCeEEEEEc-cCCc---eeEEEeecEEEecCCCC
Q psy9141 110 PDCNIYFQHKLINLDVNSGNVTFYRT-EDNS---ETKITDNQLIIGADGAY 156 (379)
Q Consensus 110 ~gv~i~~~~~v~~i~~~~~~v~v~~~-~~G~---~~~~i~adlVV~AdG~~ 156 (379)
.|++++++++|++++. +++++... .+|+ ..+ +.+|+||.|.|..
T Consensus 221 ~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~-i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 221 EGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMV-LPVKFGMMIPAFK 268 (437)
T ss_dssp TTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEE-EECSEEEEECCEE
T ss_pred CCCEEEcCCEEEEEEC--CeEEEEecccCCccccceE-EEEeEEEEcCCCc
Confidence 5899999999998864 45555431 1432 234 8999999998843
No 322
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.56 E-value=0.034 Score=51.62 Aligned_cols=39 Identities=33% Similarity=0.518 Sum_probs=33.2
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
|++++...|+|||+|..|.++|+.|+..|. +|+++|.+.
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 665445689999999999999999998886 899999864
No 323
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.56 E-value=0.04 Score=47.82 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=31.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999998865
No 324
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.50 E-value=0.073 Score=50.91 Aligned_cols=36 Identities=28% Similarity=0.416 Sum_probs=33.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
.+|+|||+|+.|+-+|..|++.|.+|+++|+.+...
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 479999999999999999999999999999987553
No 325
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.48 E-value=0.044 Score=51.06 Aligned_cols=36 Identities=19% Similarity=0.511 Sum_probs=32.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
|+...|.|||+|..|.++|..|+..|+ +|+++|..+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 445689999999999999999999999 999999875
No 326
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.46 E-value=0.027 Score=51.62 Aligned_cols=32 Identities=28% Similarity=0.360 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+|+|||+|-.|.++|..|++.|.+|++++|+.
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 69999999999999999999999999999874
No 327
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.45 E-value=0.038 Score=51.24 Aligned_cols=34 Identities=24% Similarity=0.437 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
...|.|||+|..|.++|..|++.|+ +|+++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3589999999999999999999999 999998764
No 328
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.45 E-value=0.04 Score=53.75 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=33.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
...|.|||.|..|+.+|..|++.|++|+++|+++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 468999999999999999999999999999998754
No 329
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.44 E-value=0.044 Score=52.55 Aligned_cols=34 Identities=15% Similarity=0.255 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
...|+|||+|++|+.+|..|...|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999886
No 330
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.42 E-value=0.075 Score=50.98 Aligned_cols=37 Identities=32% Similarity=0.513 Sum_probs=33.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 3579999999999999999999999999999987553
No 331
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.39 E-value=0.03 Score=51.82 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
...|.|||.|..|..+|..|++.|+ +|+++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 3579999999999999999999999 999999863
No 332
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.38 E-value=0.038 Score=54.34 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=32.3
Q ss_pred CcEEEECCChHHHHHHHHHHhC-CC-cEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN-QY-EVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~-G~-~V~viE~~~~ 40 (379)
..|.|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999876
No 333
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.38 E-value=0.027 Score=54.75 Aligned_cols=33 Identities=30% Similarity=0.350 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||.|.+||.+|..|++.|++|+.+|-++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999875
No 334
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.31 E-value=0.034 Score=51.05 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=32.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..+|.|||.|..|...|..|++.|++|+++|+++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 357999999999999999999999999999988643
No 335
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.26 E-value=0.047 Score=50.74 Aligned_cols=34 Identities=32% Similarity=0.497 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
..+|+|||+|-+|..+|..|+..|+ +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899999875
No 336
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.23 E-value=0.046 Score=50.55 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
..|+|||+|-.|..+|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999864
No 337
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.23 E-value=0.043 Score=53.60 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=32.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 57999999999999999999999999999988644
No 338
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.22 E-value=0.057 Score=50.23 Aligned_cols=36 Identities=25% Similarity=0.458 Sum_probs=32.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
|+...|.|||+|..|.++|..|+..|+ +++++|..+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 444589999999999999999999998 999999875
No 339
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.21 E-value=0.027 Score=51.12 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+...|+|||||.+|...|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45689999999999999999999999999998654
No 340
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.19 E-value=0.07 Score=52.51 Aligned_cols=37 Identities=27% Similarity=0.459 Sum_probs=33.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+...
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 234 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL 234 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc
Confidence 3579999999999999999999999999999987553
No 341
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.16 E-value=0.038 Score=55.34 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
+.+++|||||+.|+-+|..+++.|.+|+|+++...
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~ 257 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV 257 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc
Confidence 35899999999999999999999999999997653
No 342
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.14 E-value=0.045 Score=51.08 Aligned_cols=34 Identities=24% Similarity=0.423 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
...|.|||+|.+|.++|..|+..|+ +++++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4589999999999999999999987 899999753
No 343
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.11 E-value=0.061 Score=49.64 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+|..|...|..|++.|++|+++++++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 344
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.10 E-value=0.031 Score=54.85 Aligned_cols=33 Identities=24% Similarity=0.490 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN--QYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~ 39 (379)
..|.|||+|..|+.+|..|++. |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 3799999999999999999999 89999999875
No 345
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.08 E-value=0.049 Score=50.31 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||.|..|..+|..|++.|++|+++++++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 346
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.02 E-value=0.025 Score=53.53 Aligned_cols=32 Identities=28% Similarity=0.468 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|-.|.++|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999998763
No 347
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.98 E-value=0.041 Score=54.21 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|++.+|.|||+|..|..+|..|++.|++|++++|++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 667899999999999999999999999999999875
No 348
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.96 E-value=0.065 Score=49.37 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..+|.|||.|..|...|..|++.|++|+++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999998775
No 349
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.95 E-value=0.02 Score=56.19 Aligned_cols=34 Identities=21% Similarity=0.414 Sum_probs=31.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
.+|+|+|+|-.|..+|..|...|++|+|+|+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3699999999999999999999999999999863
No 350
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.95 E-value=0.04 Score=50.22 Aligned_cols=33 Identities=15% Similarity=0.385 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
.|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998763
No 351
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.92 E-value=0.045 Score=50.83 Aligned_cols=33 Identities=15% Similarity=0.383 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||.|..|..+|..|++.|++|+++++++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999998775
No 352
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.91 E-value=0.032 Score=51.31 Aligned_cols=31 Identities=26% Similarity=0.325 Sum_probs=29.0
Q ss_pred CcEEEECCChHHHHHHHHHHhC-----C-CcEEEEcc
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN-----Q-YEVNLYEA 37 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~-----G-~~V~viE~ 37 (379)
.+|.|||+|..|.++|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999986
No 353
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=93.83 E-value=0.23 Score=47.82 Aligned_cols=44 Identities=2% Similarity=0.021 Sum_probs=31.3
Q ss_pred CCCeEEeCceEEEEEecCCeEEEEEccCCceeEEEeecEEEecCCCCh
Q psy9141 110 PDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157 (379)
Q Consensus 110 ~gv~i~~~~~v~~i~~~~~~v~v~~~~~G~~~~~i~adlVV~AdG~~S 157 (379)
.||+++++++|++++. +++++... +++..+ +.+|+||.|.|...
T Consensus 213 ~GV~i~~~~~v~~v~~--~~v~~~~~-~~~g~~-i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 213 RNIDWIANVAVKAIEP--DKVIYEDL-NGNTHE-VPAKFTMFMPSFQG 256 (430)
T ss_dssp TTCEEECSCEEEEECS--SEEEEECT-TSCEEE-EECSEEEEECEEEC
T ss_pred CCCEEEeCCEEEEEeC--CeEEEEec-CCCceE-EeeeEEEECCCCcc
Confidence 5899999999999854 45555432 232233 99999999998653
No 354
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.82 E-value=0.062 Score=48.87 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.3
Q ss_pred CcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+ |-.|..+|..|++.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 37999999 9999999999999999999998763
No 355
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.82 E-value=0.052 Score=52.39 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=31.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
.+|+|||+|..|..+|..|.+.|++|++||+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999998863
No 356
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.79 E-value=0.053 Score=53.16 Aligned_cols=33 Identities=30% Similarity=0.281 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+|..|...|..|+++|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 357
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.79 E-value=0.05 Score=51.68 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=32.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
....|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998863
No 358
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.78 E-value=0.055 Score=48.11 Aligned_cols=36 Identities=22% Similarity=0.256 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
....|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 346899999999999999999999999999998753
No 359
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.77 E-value=0.048 Score=48.76 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
..|+|||+|-.|..+|..|++.|. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999886
No 360
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.75 E-value=0.057 Score=46.84 Aligned_cols=39 Identities=26% Similarity=0.351 Sum_probs=32.4
Q ss_pred CCCCCCCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 1 MKCNSKKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 1 M~~m~~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
|+.| ..|+|.|| |..|..++..|.+.|++|+++.|.+..
T Consensus 1 M~~m--~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 1 MEKV--KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp --CC--CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CCCC--CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 5544 37999995 999999999999999999999998643
No 361
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.74 E-value=0.05 Score=52.70 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..|.|||+|..|+.+|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 479999999999999999998 999999998864
No 362
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.70 E-value=0.065 Score=48.74 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
.|.|||+|..|...|..|++.|++|+++++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 363
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.68 E-value=0.044 Score=53.25 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999999875
No 364
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.66 E-value=0.065 Score=49.43 Aligned_cols=32 Identities=31% Similarity=0.475 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.+|+|||+|-.|.+.|..|+ .|.+|++++|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 37999999999999999999 999999998763
No 365
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.61 E-value=0.039 Score=48.28 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEE-EccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNL-YEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~v-iE~~~ 39 (379)
..|.|||+|-.|.++|..|++.|++|++ +++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 4799999999999999999999999999 88765
No 366
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.60 E-value=0.06 Score=50.93 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+..+|.|||.|..|..+|..|++.|++|+++++++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 44689999999999999999999999999999875
No 367
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.59 E-value=0.13 Score=50.35 Aligned_cols=36 Identities=22% Similarity=0.407 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 357999999999999999999999999999998754
No 368
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.56 E-value=0.066 Score=47.85 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCC----CcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQ----YEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G----~~V~viE~~~~ 40 (379)
..|.|||+|-.|.+.|..|++.| ++|+++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999998764
No 369
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.55 E-value=0.066 Score=52.29 Aligned_cols=34 Identities=35% Similarity=0.465 Sum_probs=31.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999998864
No 370
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.55 E-value=0.1 Score=49.01 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=31.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.|+|+|||.-|..+|..+.+.|++|+++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 6999999999999999999999999999987754
No 371
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.54 E-value=0.071 Score=49.14 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
.|+|||+|-.|..+|..|+..|+ +|+++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999999 999999864
No 372
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.46 E-value=0.077 Score=49.47 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+.+|.|||+|-.|.++|..|++.|++|++++|.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999998763
No 373
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.45 E-value=0.1 Score=51.10 Aligned_cols=101 Identities=14% Similarity=0.153 Sum_probs=65.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCCCcccccccCHHHHHHHHHCCChHHHHhCCCCceeeEEE
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLEDKLLAHGIPMRARMIH 86 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~~~~g~~i~~al~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 86 (379)
.+++|||||+.|+-+|..|++.|.+|+++++..... .+.+...+.+.+ .+.+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~------------~~d~~~~~~l~~-----~l~~~G--------- 241 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR------------GFDQQMAELVAA-----SMEERG--------- 241 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST------------TSCHHHHHHHHH-----HHHHTT---------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc------------ccCHHHHHHHHH-----HHHhCC---------
Confidence 479999999999999999999999999999853221 122333332221 122111
Q ss_pred ecCCcEEEeeCCCCCcHHHHhcCCCCeEEeCceEEEEEecCC-eEEEEEccCC---ceeEEEeecEEEecCCCChHHH
Q psy9141 87 GQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNSG-NVTFYRTEDN---SETKITDNQLIIGADGAYSGVR 160 (379)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~v~~~~~G---~~~~~i~adlVV~AdG~~S~vr 160 (379)
.. ++++++|++++.+++ .+.+++. ++ +..+ +++|.||.|.|+...+.
T Consensus 242 ------------v~-------------i~~~~~v~~i~~~~~~~~~v~~~-~~~~~~~~~-~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 242 ------------IP-------------FLRKTVPLSVEKQDDGKLLVKYK-NVETGEESE-DVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp ------------CC-------------EEETEEEEEEEECTTSCEEEEEE-ETTTCCEEE-EEESEEEECSCEEECCG
T ss_pred ------------CE-------------EEeCCEEEEEEEcCCCcEEEEEe-cCCCCceeE-EEcCEEEECcccccCcC
Confidence 11 455667777776543 4556655 43 3334 89999999999876543
No 374
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.44 E-value=0.058 Score=49.44 Aligned_cols=32 Identities=22% Similarity=0.429 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|..|...|..|++.|++|+++++++
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 69999999999999999999999999998764
No 375
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.41 E-value=0.066 Score=49.13 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+..|.|||+|.-|...|..|+ +|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 468999999999999999999 999999999775
No 376
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.38 E-value=0.079 Score=49.73 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||.|..|.++|..|++.|++|+++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999764
No 377
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.37 E-value=0.063 Score=49.75 Aligned_cols=31 Identities=42% Similarity=0.533 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
.+|+|||+|-.|.++|..|++.|++|+++ ++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 47999999999999999999999999999 55
No 378
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.37 E-value=0.099 Score=47.16 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=31.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..|+|.|+|..|..++..|.+.|++|+++.|....
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 36999999999999999999999999999988643
No 379
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.35 E-value=0.098 Score=47.54 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC---cEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY---EVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~---~V~viE~~~ 39 (379)
..|.|||+|-.|.+.|..|++.|+ +|+++++++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 479999999999999999999999 999999775
No 380
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.33 E-value=0.093 Score=48.47 Aligned_cols=32 Identities=31% Similarity=0.575 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
.|+|||||-+|..+|..|+..|+ +|+++|.+.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 79999999999999999999997 999999864
No 381
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.30 E-value=0.052 Score=53.46 Aligned_cols=33 Identities=30% Similarity=0.505 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN--QYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~ 39 (379)
..|.|||+|..|+.+|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 79999999875
No 382
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.26 E-value=0.16 Score=50.02 Aligned_cols=35 Identities=14% Similarity=0.383 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
.+++|||+|+.|+-+|..|++.|.+|+++|+.+..
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHV 217 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 57999999999999999999999999999998754
No 383
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.22 E-value=0.035 Score=44.93 Aligned_cols=33 Identities=27% Similarity=0.444 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|+|||+|..|..+|..|++.|.+|+++++.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 479999999999999999999999999998764
No 384
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.22 E-value=0.093 Score=48.48 Aligned_cols=32 Identities=28% Similarity=0.494 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKN--QYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~ 39 (379)
.|+|||+|..|..+|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 599999999999999999985 78999999875
No 385
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.19 E-value=0.089 Score=50.53 Aligned_cols=35 Identities=17% Similarity=0.318 Sum_probs=31.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
...|+|||+|.+|+.+|..+...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998764
No 386
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.17 E-value=0.1 Score=49.82 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
...|+|+|+|.+|+.+|..+...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999775
No 387
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.16 E-value=0.089 Score=48.97 Aligned_cols=32 Identities=22% Similarity=0.165 Sum_probs=29.8
Q ss_pred cEEEECCChHHHH-HHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSL-SACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~-~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||.|.+|++ +|..|+++|++|++.|+++
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 7999999999996 8999999999999999875
No 388
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.10 E-value=0.093 Score=48.69 Aligned_cols=35 Identities=17% Similarity=0.103 Sum_probs=30.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCC----CcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQ----YEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G----~~V~viE~~~ 39 (379)
....|.|||+|-.|.++|..|++.| ++|+++++++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3457999999999999999999999 7999998775
No 389
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.02 E-value=0.034 Score=49.21 Aligned_cols=33 Identities=18% Similarity=0.014 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
..+|.|||+|..|.++|..|++.|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 457999999999999999999999999999874
No 390
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.02 E-value=0.048 Score=51.16 Aligned_cols=35 Identities=37% Similarity=0.437 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC-------CcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQ-------YEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G-------~~V~viE~~~~ 40 (379)
...|.|||+|-.|.++|..|++.| ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 347999999999999999999999 89999998764
No 391
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.00 E-value=0.074 Score=48.59 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+|-.|...|..|++.|++|+++++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998764
No 392
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.91 E-value=0.11 Score=51.24 Aligned_cols=35 Identities=9% Similarity=0.225 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 34799999999999999999999999999998863
No 393
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.89 E-value=0.095 Score=48.58 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQ-YEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G-~~V~viE~~~~ 40 (379)
..|.|||.|..|..+|..|++.| ++|+++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 47999999999999999999999 99999998863
No 394
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.86 E-value=0.12 Score=44.97 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+|-.|...|..|++.|++|+++++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 395
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.84 E-value=0.08 Score=50.06 Aligned_cols=34 Identities=32% Similarity=0.499 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
...|+|+|+|.+|++++..|+..|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999998764
No 396
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.84 E-value=0.094 Score=47.41 Aligned_cols=32 Identities=25% Similarity=0.463 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
.|.|||+|..|.++|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 899998653
No 397
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=92.69 E-value=0.099 Score=51.35 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+.+|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4579999999999999999999999999999875
No 398
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.68 E-value=0.071 Score=49.43 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEA 37 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~ 37 (379)
.|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 599999999999999999999999999997
No 399
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.67 E-value=0.098 Score=47.35 Aligned_cols=31 Identities=19% Similarity=0.316 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|..|...|..|++ |++|+++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999998764
No 400
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.66 E-value=0.14 Score=43.36 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=31.2
Q ss_pred CcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..|+|+|| |-.|..++..|.+.|++|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 46999998 99999999999999999999998764
No 401
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.61 E-value=0.072 Score=51.17 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|..|+.+|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 59999999999999999999 99999999875
No 402
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.59 E-value=0.23 Score=48.38 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..+++|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 357999999999999999999999999999998754
No 403
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.53 E-value=0.078 Score=47.52 Aligned_cols=33 Identities=21% Similarity=0.463 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCc-EEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYE-VNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~-V~viE~~~ 39 (379)
..|.|||+|-.|...|..|++.|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999998 89998753
No 404
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.52 E-value=0.14 Score=50.65 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=31.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..|.|||.|..|..+|..|+++|++|+++++.+.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998763
No 405
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.51 E-value=0.13 Score=44.93 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=31.4
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
++...|+|.|| |-.|..++..|++.|++|+++.|++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 34567999998 9999999999999999999999875
No 406
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.39 E-value=0.11 Score=49.21 Aligned_cols=34 Identities=32% Similarity=0.451 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
...|+|+|+|.+|..+|..|+..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999998764
No 407
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.38 E-value=0.054 Score=47.66 Aligned_cols=34 Identities=18% Similarity=0.047 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
+..|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3479999999999999999999999 999998864
No 408
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.37 E-value=0.11 Score=47.96 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHhCC--CcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQ--YEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G--~~V~viE~~~ 39 (379)
.|+|||+|-.|.++|..|++.| .+|+++|+++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999864
No 409
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.25 E-value=0.1 Score=47.60 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+|..|...|..|++.|++|+++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 379999999999999999999999999998764
No 410
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.22 E-value=0.12 Score=49.14 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=32.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
.++..|+|+|||-+|+.+|..|...|. +|+++|++-
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 456789999999999999999999999 999999874
No 411
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.22 E-value=0.17 Score=45.73 Aligned_cols=35 Identities=9% Similarity=0.080 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+...|+|+|+|-+|.++|..|++.|.+|+|++|+.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34579999999999999999999999999998763
No 412
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.21 E-value=0.12 Score=46.54 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|..|.++|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999998653
No 413
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.18 E-value=0.14 Score=50.22 Aligned_cols=36 Identities=36% Similarity=0.481 Sum_probs=32.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 358999999999999999999999999999998754
No 414
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.16 E-value=0.14 Score=46.87 Aligned_cols=32 Identities=28% Similarity=0.535 Sum_probs=30.0
Q ss_pred cEEEEC-CChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVG-GGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVG-aGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.||| +|-.|.++|..|++.|++|+++++++
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 699999 99999999999999999999998764
No 415
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.03 E-value=0.28 Score=46.63 Aligned_cols=36 Identities=22% Similarity=0.481 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
...|+|||+|..|..+|.++.+.|++|++++..+..
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~ 49 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNS 49 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC
Confidence 457999999999999999999999999999977543
No 416
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.98 E-value=0.13 Score=48.85 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
....|+|||+|.+|..+|..++..|.+|+++|+++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34679999999999999999999999999998764
No 417
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.98 E-value=0.17 Score=47.33 Aligned_cols=36 Identities=11% Similarity=0.245 Sum_probs=32.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~ 41 (379)
...|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 4689999999999999999999998 79999988644
No 418
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=91.97 E-value=0.22 Score=48.02 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=32.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
|+...|+|+|+|..|..++.++.+.|++|.++|..+.
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 4456899999999999999999999999999987653
No 419
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=91.94 E-value=0.17 Score=45.44 Aligned_cols=39 Identities=18% Similarity=-0.010 Sum_probs=32.9
Q ss_pred CCCCCCCcEEEECC---ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGG---GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGa---GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|++|+...|+|.|| |-.|..+|..|++.|.+|++++|+.
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 55555567999997 5889999999999999999999875
No 420
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.92 E-value=0.11 Score=47.47 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARED 40 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~ 40 (379)
+...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 34689999999999999999999998 8999997763
No 421
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.90 E-value=0.19 Score=45.83 Aligned_cols=35 Identities=26% Similarity=0.437 Sum_probs=32.3
Q ss_pred CCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 6 KKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
...|+|.|| |..|..++..|.+.|++|+++.|.+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 457999998 99999999999999999999998875
No 422
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.87 E-value=0.11 Score=49.31 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHHhCC-------CcEEEEccCCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQ-------YEVNLYEARED 40 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G-------~~V~viE~~~~ 40 (379)
.|.|||+|-.|.++|..|++.| ++|+++++++.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998754
No 423
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.85 E-value=0.15 Score=47.43 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=31.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
+....|+|||+|.+|.++|..|+..|+ ++.++|...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 445689999999999999999999988 899999753
No 424
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.83 E-value=0.1 Score=47.88 Aligned_cols=32 Identities=38% Similarity=0.398 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
.|+|||+|..|.++|..|++.|+ +|+++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 59999999999999999999998 899999865
No 425
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.75 E-value=0.17 Score=43.48 Aligned_cols=32 Identities=28% Similarity=0.280 Sum_probs=29.6
Q ss_pred cEEEEC-CChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVG-GGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVG-aGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|+||| +|-.|...|..|++.|++|++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 599999 99999999999999999999998764
No 426
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.74 E-value=0.14 Score=47.56 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
.|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 59999999999999999999999 999999864
No 427
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.74 E-value=0.18 Score=44.67 Aligned_cols=32 Identities=9% Similarity=0.137 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCC----cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY----EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~----~V~viE~~~ 39 (379)
.|.|||+|-.|.+.|..|.+.|+ +|+++++++
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 69999999999999999999998 999998764
No 428
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.73 E-value=0.16 Score=45.33 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~ 40 (379)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4689999999999999999999998 7999998753
No 429
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=91.69 E-value=0.17 Score=46.02 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|-.|...|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999998764
No 430
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=91.67 E-value=0.99 Score=44.41 Aligned_cols=35 Identities=11% Similarity=0.155 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEccCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDI 41 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~~~ 41 (379)
.+|+|||+|-+|.=.+..|++. +.+|+++=|.+..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 4799999999999999999875 6799999988643
No 431
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.60 E-value=0.16 Score=48.25 Aligned_cols=36 Identities=17% Similarity=0.105 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
.++..|+|+|||-+|..+|..|...|. +|+++|+.-
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 456789999999999999999999998 799999874
No 432
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.59 E-value=0.12 Score=50.03 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
....|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4689999999999999999999999999998864
No 433
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.53 E-value=0.13 Score=45.86 Aligned_cols=32 Identities=22% Similarity=0.371 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHhCC-CcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQ-YEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G-~~V~viE~~~ 39 (379)
.|.|||+|-.|...|..|++.| ++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5999999999999999999999 9999998763
No 434
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.53 E-value=0.23 Score=46.57 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=31.4
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 4 NSKKSVVIVGG-GLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGa-GpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
|+...|+|||+ |-+|..+|..++..|. +++++|...
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 55568999997 9999999999999985 899999754
No 435
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.43 E-value=0.18 Score=49.28 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
+...|+|||+|.+|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4568999999999999999999999999999864
No 436
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.39 E-value=0.22 Score=45.69 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
...|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4579999999999999999999998 899998764
No 437
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.36 E-value=0.24 Score=44.71 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|+|+|+|-+|-++|..|++.|.+|+|+.|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998875
No 438
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=91.35 E-value=0.31 Score=46.45 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=34.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
....++|+|||..|..+|..++..|++|+|+|.++...
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 35689999999999999999999999999999887654
No 439
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.33 E-value=0.16 Score=52.62 Aligned_cols=33 Identities=42% Similarity=0.591 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
.|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 699999999999999999999999999998763
No 440
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.32 E-value=0.2 Score=49.30 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.+|.|||+|-.|..+|..|++.|++|+++++++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999999875
No 441
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=91.31 E-value=0.16 Score=47.05 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
.|.|||+|..|.++|..|++.|+ +++++|..+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 59999999999999999999987 899999875
No 442
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.29 E-value=0.19 Score=49.23 Aligned_cols=35 Identities=26% Similarity=0.236 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
....|+|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34579999999999999999999999999998764
No 443
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.15 E-value=0.17 Score=45.52 Aligned_cols=33 Identities=9% Similarity=0.140 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|+|.|||..|..++..|.+.|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 379999999999999999999999999998865
No 444
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.99 E-value=0.21 Score=49.98 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=33.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
.+++|||+|..|..+|..|.+.|++|+++|+++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~ 384 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV 384 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHH
Confidence 579999999999999999999999999999998653
No 445
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=90.98 E-value=0.16 Score=46.09 Aligned_cols=33 Identities=27% Similarity=0.510 Sum_probs=29.0
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKN--QYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~--G~~V~viE~~~ 39 (379)
..|.|||+|-.|.++|..|++. |.+|+++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4799999999999999999988 67899988653
No 446
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.98 E-value=0.12 Score=49.34 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHh-CCCcEEEEcc
Q psy9141 8 SVVIVGGGLVGSLSACMFAK-NQYEVNLYEA 37 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~-~G~~V~viE~ 37 (379)
+|.|||+|-.|.++|..|++ .|++|+++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 69999999999999999998 5999999983
No 447
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.77 E-value=0.26 Score=44.66 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=30.0
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|+|+|| |-.|..++..|.+.|++|+++.|+.
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 6999997 9999999999999999999999875
No 448
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.73 E-value=0.21 Score=46.46 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
..|.|||+|..|..+|..|+..|+ +++++|...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 589999999999999999999998 899999754
No 449
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.72 E-value=0.2 Score=47.21 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~ 40 (379)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4689999999999999999999998 7999998753
No 450
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.71 E-value=0.28 Score=45.70 Aligned_cols=35 Identities=26% Similarity=0.388 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
+...|.|||+|-+|.++|+.|+..|+ +++++|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 34689999999999999999999988 899999753
No 451
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.64 E-value=0.33 Score=45.93 Aligned_cols=36 Identities=31% Similarity=0.477 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
+...|+|||+|..|..+|.++.+.|++|+++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 346899999999999999999999999999997654
No 452
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.59 E-value=0.19 Score=46.15 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=27.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR 42 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~ 42 (379)
.+|-+||-|..|...|..|.++|++|+++|+.+...
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~ 41 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKA 41 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 379999999999999999999999999999887543
No 453
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.59 E-value=0.23 Score=44.32 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=31.0
Q ss_pred CCCCcEEEECC-C-hHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGG-G-LVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGa-G-paGl~~A~~La~~G~~V~viE~~~ 39 (379)
++..-|+|.|| | -.|..+|..|++.|.+|++++++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 34457999998 7 499999999999999999998774
No 454
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=90.57 E-value=0.25 Score=47.57 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
....|+|||.|.+|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34589999999999999999999999999999765
No 455
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=90.56 E-value=0.26 Score=44.42 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=31.1
Q ss_pred CCCCCCCcEEEECC-Ch--HHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGG-GL--VGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGa-Gp--aGl~~A~~La~~G~~V~viE~~~ 39 (379)
|..++..-|+|.|| |- .|.++|..|++.|.+|+++.++.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 44444557888886 45 79999999999999999999875
No 456
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.49 E-value=0.31 Score=45.50 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|.|||+|-.|.+.|..|++.|++|+++++.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 369999999999999999999999999998764
No 457
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.44 E-value=0.22 Score=48.93 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+|.|||+|-.|..+|..|++.|++|+++++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998764
No 458
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=90.42 E-value=0.37 Score=42.68 Aligned_cols=40 Identities=30% Similarity=0.385 Sum_probs=32.7
Q ss_pred CCCCCCCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 1 MKCNSKKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 1 M~~m~~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
|+.|+...|+|.|| |-.|..+|..|++.|.+|++++++..
T Consensus 1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE 41 (256)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 55565667899985 68899999999999999999998753
No 459
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.41 E-value=0.31 Score=44.48 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
....|.|||+|..|..+|..|...|.+|+++++.+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34579999999999999999999999999999764
No 460
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.37 E-value=0.27 Score=42.02 Aligned_cols=32 Identities=22% Similarity=0.167 Sum_probs=29.7
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|+|.|| |-.|..++..|.+.|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4999996 9999999999999999999999875
No 461
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.36 E-value=0.22 Score=51.55 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 3699999999999999999999999999998763
No 462
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=90.33 E-value=0.25 Score=46.22 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=32.1
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHhC-CCcEEEEccCCCC
Q psy9141 4 NSKKSVVIVGG-GLVGSLSACMFAKN-QYEVNLYEAREDI 41 (379)
Q Consensus 4 m~~~dVvIVGa-GpaGl~~A~~La~~-G~~V~viE~~~~~ 41 (379)
|+...|+|.|| |..|..++..|.+. |++|+++.|.+..
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 61 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDR 61 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhh
Confidence 44457999995 99999999999998 9999999987643
No 463
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=90.29 E-value=0.29 Score=43.81 Aligned_cols=37 Identities=11% Similarity=0.010 Sum_probs=31.6
Q ss_pred CCCCCcEEEECC---ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 3 CNSKKSVVIVGG---GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 3 ~m~~~dVvIVGa---GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.++...|+|.|| |-.|.++|..|++.|.+|++++++.
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 355567999995 7889999999999999999998865
No 464
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.25 E-value=0.26 Score=48.46 Aligned_cols=34 Identities=29% Similarity=0.250 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
...|+|||+|..|..+|..|...|.+|+++|+++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999764
No 465
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=90.23 E-value=0.35 Score=42.21 Aligned_cols=37 Identities=11% Similarity=0.027 Sum_probs=32.0
Q ss_pred CCCCCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 3 CNSKKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 3 ~m~~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+|+...|+|.|| |-.|..+|..|++.|.+|++++|++
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN 41 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 355667999997 8999999999999999999998764
No 466
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.22 E-value=0.24 Score=44.76 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
...|+|+|+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999998764
No 467
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.16 E-value=0.27 Score=45.70 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=31.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 4 NSKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
+++..|+|||||-+|.++|..|+..++ ++.++|.+.
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 345689999999999999999998886 799999753
No 468
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.13 E-value=0.34 Score=44.29 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
....|.|||+|..|..+|..|...|.+|+++++.+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34579999999999999999999999999999764
No 469
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.07 E-value=0.24 Score=45.52 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--cEEEEccCCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~~ 40 (379)
..|.|||||-.|..+|..|+..|+ +|+++|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 479999999999999999999998 9999998764
No 470
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=90.02 E-value=0.3 Score=43.55 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=30.8
Q ss_pred CCCCcEEEECC---ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGG---GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGa---GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
++...|+|.|| |-.|..+|..|++.|.+|++++|++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 34456899997 5889999999999999999998875
No 471
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=89.98 E-value=0.37 Score=46.89 Aligned_cols=37 Identities=24% Similarity=0.423 Sum_probs=33.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDI 41 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~ 41 (379)
+.+||+|||||++|+++|+.|++.|+ +|+|+|+.+.+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 45799999999999999999999999 89999998754
No 472
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=89.97 E-value=0.2 Score=51.90 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=31.1
Q ss_pred CcEEEEC--CChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVG--GGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVG--aGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 99999999999999999999999886
No 473
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.94 E-value=0.22 Score=46.39 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=29.5
Q ss_pred CCcEEEECC-ChHHHHHHHHHHhCCC-------cEEEEccC
Q psy9141 6 KKSVVIVGG-GLVGSLSACMFAKNQY-------EVNLYEAR 38 (379)
Q Consensus 6 ~~dVvIVGa-GpaGl~~A~~La~~G~-------~V~viE~~ 38 (379)
+..|+|+|| |-+|..++..|+..|+ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 458999998 9999999999999886 79999876
No 474
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.88 E-value=0.3 Score=43.48 Aligned_cols=39 Identities=21% Similarity=0.133 Sum_probs=31.5
Q ss_pred CCCCCCCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|++++..-|+|.|| |-.|..+|..|++.|.+|++++|+.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 44445567888885 7889999999999999999998864
No 475
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=89.83 E-value=0.35 Score=43.89 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=29.9
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|+|+|| |-.|..++..|.+.|++|+++.|++
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 6999996 9999999999999999999999875
No 476
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.83 E-value=0.34 Score=44.80 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=31.4
Q ss_pred CCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCCCC
Q psy9141 6 KKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~~~ 41 (379)
...|+|.|| |..|..++..|.+.|++|+++.|.+..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 457999998 999999999999999999999988643
No 477
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.81 E-value=0.32 Score=48.87 Aligned_cols=36 Identities=11% Similarity=0.245 Sum_probs=32.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~ 41 (379)
...|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 4689999999999999999999998 79999988643
No 478
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=89.74 E-value=0.45 Score=41.54 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=31.2
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 4 NSKKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 4 m~~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
++...|+|.|| |-.|..+|..|++.|.+|+++.|+.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44567999997 8999999999999999999998764
No 479
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.71 E-value=0.28 Score=44.48 Aligned_cols=36 Identities=14% Similarity=0.059 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~ 41 (379)
...|+|+|+|-+|.++|..|++.|. +|+|+.|....
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~ 153 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSR 153 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence 3579999999999999999999999 89999988643
No 480
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.67 E-value=0.21 Score=45.26 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|-.|...|..|++.|++|++++ ++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 69999999999999999999999999998 54
No 481
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.63 E-value=0.28 Score=45.45 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC--cEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 39 (379)
+..|+|||||-+|.++|..|+..++ ++.++|.+.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3589999999999999999999887 899999753
No 482
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.61 E-value=0.26 Score=43.88 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|.|||+|-.|...|..|++.|++|.++++++
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 79999999999999999999999999998764
No 483
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.52 E-value=0.31 Score=44.87 Aligned_cols=32 Identities=28% Similarity=0.472 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
.|.|||||.+|..+|..|+..|+ ++.++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999998888 699999874
No 484
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.46 E-value=0.34 Score=41.62 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=29.6
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 8 SVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 8 dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
.|+|.|| |-.|..++..|.+.|++|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999998864
No 485
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=89.43 E-value=0.38 Score=44.75 Aligned_cols=35 Identities=17% Similarity=0.427 Sum_probs=30.3
Q ss_pred CCcEEEECC-ChHHHHHHHHHHhCC-CcEEEEccCCC
Q psy9141 6 KKSVVIVGG-GLVGSLSACMFAKNQ-YEVNLYEARED 40 (379)
Q Consensus 6 ~~dVvIVGa-GpaGl~~A~~La~~G-~~V~viE~~~~ 40 (379)
...|+|.|| |..|..++..|.+.| ++|+++.+.+.
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 357999998 999999999999999 99999988753
No 486
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=89.42 E-value=0.45 Score=42.55 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=30.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
+. .|+|||+|-+|.+.|..|.+.|.+|++++|..
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34 79999999999999999999999999998764
No 487
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=89.41 E-value=0.41 Score=43.99 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=31.0
Q ss_pred CcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 7 KSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 7 ~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
..|+|.|| |-.|..++..|++.|++|+++.|.+.
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 46999998 99999999999999999999998764
No 488
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.39 E-value=0.29 Score=44.25 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 7 ~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
..|+|||+|-+|.+.|..|.+.|.+|++++|++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999998774
No 489
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.33 E-value=0.45 Score=42.34 Aligned_cols=39 Identities=18% Similarity=0.079 Sum_probs=32.7
Q ss_pred CCCCCCCcEEEECCC---hHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGGG---LVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGaG---paGl~~A~~La~~G~~V~viE~~~ 39 (379)
|.+++..-++|-||+ =.|.++|..|++.|.+|++.+|+.
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 666677778999963 359999999999999999999875
No 490
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.30 E-value=0.39 Score=43.43 Aligned_cols=33 Identities=24% Similarity=0.468 Sum_probs=30.4
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEccCCC
Q psy9141 8 SVVIVGG-GLVGSLSACMFAKNQYEVNLYEARED 40 (379)
Q Consensus 8 dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~~ 40 (379)
+|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4999998 99999999999999999999988753
No 491
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.30 E-value=0.47 Score=43.11 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=30.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
+...|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 34579999999999999999999999 699998764
No 492
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=89.15 E-value=0.36 Score=48.39 Aligned_cols=36 Identities=11% Similarity=0.245 Sum_probs=32.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCCCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDI 41 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~~ 41 (379)
...|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 4689999999999999999999998 79999977643
No 493
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.12 E-value=0.32 Score=43.34 Aligned_cols=30 Identities=23% Similarity=0.104 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEcc
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQYEVNLYEA 37 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~~V~viE~ 37 (379)
.|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 599999999999999999999999999755
No 494
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=89.05 E-value=0.4 Score=42.15 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=32.6
Q ss_pred CCCCCCCcEEEECC-ChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MKCNSKKSVVIVGG-GLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~~m~~~dVvIVGa-GpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
|.+++...|+|.|| |-.|..+|..|++.|.+|++++|++
T Consensus 1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (246)
T 2ag5_A 1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE 40 (246)
T ss_dssp CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 55555567888886 7889999999999999999998864
No 495
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.03 E-value=0.46 Score=42.42 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCC-cEEEEccCCC
Q psy9141 8 SVVIVGGGLVGSLSACMFAKNQY-EVNLYEARED 40 (379)
Q Consensus 8 dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~~ 40 (379)
.|+|||+|-+|-+++..|.+.|. +|+|++|...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 79999999999999999999998 8999998753
No 496
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.96 E-value=0.52 Score=41.88 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=31.9
Q ss_pred CC-CCCCCcEEEECC-Ch--HHHHHHHHHHhCCCcEEEEccCC
Q psy9141 1 MK-CNSKKSVVIVGG-GL--VGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 1 M~-~m~~~dVvIVGa-Gp--aGl~~A~~La~~G~~V~viE~~~ 39 (379)
|+ +++..-|+|.|| |- .|.++|..|++.|.+|+++.+..
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 44 355567999997 45 79999999999999999998764
No 497
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.95 E-value=0.49 Score=44.64 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEccC
Q psy9141 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38 (379)
Q Consensus 5 ~~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~ 38 (379)
....|+|+|+|-+|..+|..|.+.|.+|++.|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4567999999999999999999999999998853
No 498
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.87 E-value=0.35 Score=43.93 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=29.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~~V~viE~~~ 39 (379)
...|+|+|+|-+|.++|..|++.| +|++++|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 457999999999999999999999 999998763
No 499
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.86 E-value=0.5 Score=43.68 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEccCC
Q psy9141 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEARE 39 (379)
Q Consensus 6 ~~dVvIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 39 (379)
...++|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4579999999999999999999998 899998873
No 500
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=88.83 E-value=0.42 Score=44.23 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=30.9
Q ss_pred CCCcEEEECCC-hHHHHHHHHHHhCCCcEEEEccCC
Q psy9141 5 SKKSVVIVGGG-LVGSLSACMFAKNQYEVNLYEARE 39 (379)
Q Consensus 5 ~~~dVvIVGaG-paGl~~A~~La~~G~~V~viE~~~ 39 (379)
...+|+|||+| .+|..+|..|.+.|.+|++++|+.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 34689999999 689999999999999999998763
Done!