RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9141
(379 letters)
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 86.2 bits (212), Expect = 1e-19
Identities = 30/197 (15%), Positives = 56/197 (28%), Gaps = 22/197 (11%)
Query: 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALR 65
K V I+G G G L + K + + E + G+ L + LR
Sbjct: 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDY----VLGRIRAGVLEQGMVDLLR 57
Query: 66 RIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQV---------------ELEQYP 110
G++ ++ G+ I + R + E
Sbjct: 58 EAGVDRRMARDGLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACG 117
Query: 111 DCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMKQSMFN 170
+Y ++ D+ D ++ I G DG + R+ + + M +
Sbjct: 118 ATTVYQAAEVRLHDLQGERPYVTFERDGERLRLD-CDYIAGCDGFHGISRQSIPAERMQH 176
Query: 171 YSQTYIEHGYMELCIPP 187
G +PP
Sbjct: 177 --GRLFLAGDAAHIVPP 191
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 77.8 bits (190), Expect = 8e-17
Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 27/200 (13%)
Query: 9 VVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRI 67
++I G G+ G A + +V L E+ +IR G+ + + EAL +
Sbjct: 4 ILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVG------INIQPAAVEALAEL 57
Query: 68 GLEDKLLAHGIPMRARMIHGQNGK-------------------LREIPYDPVHNQVELEQ 108
GL L A IP Q+G + + E+
Sbjct: 58 GLGPALAATAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRER 117
Query: 109 YPDCNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMK-QS 167
+ + ++ G V + + + + +++GADG +S VR L Q
Sbjct: 118 LGQQAVRTGLGVERIEERDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQR 177
Query: 168 MFNYSQTYIEHGYMELCIPP 187
+ G + L
Sbjct: 178 PLRDPLPHWGRGRITLLGDA 197
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living
yeast (Trichosporon cutaneum) [TaxId: 5554]}
Length = 360
Score = 71.7 bits (174), Expect = 2e-14
Identities = 34/216 (15%), Positives = 70/216 (32%), Gaps = 20/216 (9%)
Query: 9 VVIVGGGLVGSLSACMFAKNQ-----YEVNLYEAREDIRNSGLSEGKSINLALSVRGREA 63
V+IVG G G ++A + ++ +V + + R +G + L R E+
Sbjct: 10 VLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQA------DGLQCRTLES 63
Query: 64 LRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINL 123
L+ +GL DK+L+ M ++ + D + + + + Q ++
Sbjct: 64 LKNLGLADKILSEANDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERR 123
Query: 124 ---DVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMKQS------MFNYSQT 174
+ + T + E + + D V L S + +T
Sbjct: 124 ILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKT 183
Query: 175 YIEHGYMELCIPPSEDNEVWLYKNRLLSSVPEVRKR 210
L ED L + + + V +
Sbjct: 184 ENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCK 219
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 67.1 bits (162), Expect = 3e-13
Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 15/192 (7%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREAL 64
+ + +VGG + G +A M +V++YE + G + + L
Sbjct: 3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLS-----GFGTGIVVQPELVHYL 57
Query: 65 RRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVE------LEQYPDCNIYFQH 118
G+E ++ + ++ +P D + E + +
Sbjct: 58 LEQGVELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSK 117
Query: 119 KLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMKQSMFNYSQTYIEH 178
L+ L +S V R D ++ + +IGADG S VRK L+ +
Sbjct: 118 CLVGLSQDSETVQM-RFSDGTKAE---ANWVIGADGGASVVRKRLLGIETVDRMVHGRVL 173
Query: 179 GYMELCIPPSED 190
+ + P
Sbjct: 174 LIGDAAVTPRPH 185
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 42.4 bits (98), Expect = 5e-05
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Query: 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI-----------RNSGLSEGKSI 52
++ K VVIVG G+ G +A + A ++V + EA E + G
Sbjct: 28 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMR 87
Query: 53 NLALSVRGREALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDP 99
RE +R+ L + I K+ E+ DP
Sbjct: 88 LPEKHRIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDP 134
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 41.7 bits (96), Expect = 8e-05
Identities = 18/134 (13%), Positives = 38/134 (28%), Gaps = 9/134 (6%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI-------RNSG--LSEGKSINLALSVR 59
V +VGGG+ G A + L E+ + +G + +G + L
Sbjct: 3 VAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPA 62
Query: 60 GREALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHK 119
R + LE ++ A + R ++ + P ++
Sbjct: 63 TRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAGEL 122
Query: 120 LINLDVNSGNVTFY 133
+ +
Sbjct: 123 FSRRAPEGVDESLA 136
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 40.0 bits (92), Expect = 2e-04
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39
+ +S+K VV++G G++G SA + A+ Y V++
Sbjct: 1 LMMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 39.6 bits (91), Expect = 3e-04
Identities = 14/136 (10%), Positives = 34/136 (25%), Gaps = 4/136 (2%)
Query: 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRG 60
M + V+++GGG G ++A A+ V L + + G +
Sbjct: 1 MHYD----VIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLP 56
Query: 61 REALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKL 120
+ + + + + + + + L
Sbjct: 57 LDEIVKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDAL 116
Query: 121 INLDVNSGNVTFYRTE 136
+ + G T
Sbjct: 117 LTRLKDLGVKIRTNTP 132
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 39.9 bits (91), Expect = 4e-04
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
V+I+G G+ G +A +V L EAR+ +
Sbjct: 5 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 40
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 39.3 bits (90), Expect = 6e-04
Identities = 30/215 (13%), Positives = 57/215 (26%), Gaps = 19/215 (8%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI----RNSGLSEGKSINLALSVRG---- 60
VV+VGGG+ G +A + + V + EAR+ + + K ++L S G
Sbjct: 2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQN 61
Query: 61 --REALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYP-------D 111
+ +GLE R P+ PV N + + D
Sbjct: 62 RILRLAKELGLE--TYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDD 119
Query: 112 CNIYFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMKQSMFNY 171
+ ++ + A + + +
Sbjct: 120 MGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALW 179
Query: 172 SQTYIEHGYMELCIPPSEDNEVWLYKNRLLSSVPE 206
Y++ I + + V E
Sbjct: 180 FLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSE 214
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 39.0 bits (89), Expect = 6e-04
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
K V ++G G+ G +A + V ++EA
Sbjct: 2 KRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 36
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 38.5 bits (88), Expect = 9e-04
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 1/119 (0%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSV-RGREALRRI 67
V++VG G +G + AK + L +A + +G G + + + GRE +
Sbjct: 6 VIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLA 65
Query: 68 GLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVN 126
+L I + G L P E + + L ++N
Sbjct: 66 LRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEIN 124
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 38.2 bits (88), Expect = 0.001
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
K ++IVG G G++ A+ ++V++ + R+ I
Sbjct: 2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 37
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 37.6 bits (86), Expect = 0.001
Identities = 9/46 (19%), Positives = 14/46 (30%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSI 52
K+ ++G G G A A V ++ G I
Sbjct: 2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAII 47
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 37.6 bits (86), Expect = 0.001
Identities = 22/163 (13%), Positives = 41/163 (25%), Gaps = 15/163 (9%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIG 68
+I+G G G A AK V +++ + I L G ++ A
Sbjct: 7 NIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQ 66
Query: 69 LEDKL--------------LAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNI 114
+ L + E V I
Sbjct: 67 NPHFVKSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKI 126
Query: 115 YFQHKLINLDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYS 157
+ ++ ++ + + T+ LI+ A G S
Sbjct: 127 LLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIV-ATGGLS 168
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 37.5 bits (85), Expect = 0.002
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
V+++G GL + + + + N +V +
Sbjct: 9 VIVLGTGLTECILSGIMSVNGKKVLHMDRNPYY 41
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 36.3 bits (82), Expect = 0.002
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
N+ +VVIVG GL G A + +E N+ +
Sbjct: 1 NANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 38
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha
subunit, middle domain {Pseudomonas fragi [TaxId: 296]}
Length = 186
Score = 35.3 bits (80), Expect = 0.006
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40
K ++G G++G A A + + + E
Sbjct: 5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 38
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 297
Score = 35.9 bits (81), Expect = 0.006
Identities = 4/33 (12%), Positives = 17/33 (51%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
V+++G G+ + + + + + +V + ++
Sbjct: 8 VIVLGTGITECILSGLLSVDGKKVLHIDKQDHY 40
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 35.3 bits (80), Expect = 0.006
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRN 43
K V ++GGGL+G+ A + A + V L + EDI
Sbjct: 5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILA 41
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 35.1 bits (79), Expect = 0.009
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39
V++GGG++GS A AK L+E+
Sbjct: 7 AVVIGGGIIGSAIAYYLAKENKNTALFESGT 37
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 34.3 bits (77), Expect = 0.012
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
K VV++G GL + Y+ + ++
Sbjct: 3 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 38
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 34.5 bits (78), Expect = 0.014
Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 12/129 (9%)
Query: 4 NSKKSVVIVGGGLVGSLSACMFAKNQ-YEVNLYEAREDIRNSGLSEGKSINLALSVRGRE 62
++ VV+VG G G +A +KN +V + E G L +
Sbjct: 31 YAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP-------GGGAWLGGQLFSAM 83
Query: 63 ALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLIN 122
+R+ L G+ + + + + P+ ++ +
Sbjct: 84 IVRKP-AHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA---RPNVKLFNAVAAED 139
Query: 123 LDVNSGNVT 131
L V V
Sbjct: 140 LIVKGNRVG 148
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 34.1 bits (77), Expect = 0.020
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
VV++G G++G +A + + V +
Sbjct: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLDVKVY 35
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 34.2 bits (77), Expect = 0.021
Identities = 24/192 (12%), Positives = 52/192 (27%), Gaps = 24/192 (12%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDI-----------RNSGLSEGKSIN 53
+ + I+G G G ++A + +V L+E R + I
Sbjct: 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPIL 64
Query: 54 LALSVRGREALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVE--LEQYPD 111
+ G AL M + + P + ++ Y
Sbjct: 65 TTEPIVGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQ 124
Query: 112 C---NIYFQHKLINLDVNSG--NVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMKQ 166
I +++++ G VT+ T+ S + +G Y
Sbjct: 125 PLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYE----VPYTG 180
Query: 167 SMFNYSQTYIEH 178
+++ +
Sbjct: 181 YLYSVPFPSLAK 192
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 34.0 bits (77), Expect = 0.021
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
+IVG GL G++ A K +V + E R I
Sbjct: 4 YIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase,
middle domain {Escherichia coli [TaxId: 562]}
Length = 179
Score = 33.6 bits (76), Expect = 0.021
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39
+ KK++ +VG G G A A ++V L++A
Sbjct: 38 LPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 76
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 34.1 bits (77), Expect = 0.024
Identities = 27/167 (16%), Positives = 37/167 (22%), Gaps = 11/167 (6%)
Query: 9 VVIVGGGLVGSLSACMFAKNQ------YEVNLYEAREDIRNSGLSEGKSINLALSVRGRE 62
VVIVG G G +A + V L E I LS L R E
Sbjct: 35 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGA-----CLDPRAFE 89
Query: 63 ALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLIN 122
L E + R +P P Y + +
Sbjct: 90 ELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGE 149
Query: 123 LDVNSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMKQSMF 169
G + D + A + K +
Sbjct: 150 QAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFE 196
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 189
Score = 33.3 bits (75), Expect = 0.027
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNS 44
V+ G G G+ A + +K EV ++ E+
Sbjct: 8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRL 45
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 33.5 bits (75), Expect = 0.035
Identities = 27/180 (15%), Positives = 47/180 (26%), Gaps = 24/180 (13%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR-NSGLSEGKSINLALSVRGREALRRI 67
VV+VG G G +A + +V L E I N+ L+ G
Sbjct: 19 VVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAG--------------GMNA 64
Query: 68 GLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDVNS 127
D+ A I ++ K + DP +V D +
Sbjct: 65 AWTDQQKAKKITDSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAM-------- 116
Query: 128 GNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMKQSMFNYSQTYIEHGYMELCIPP 187
+ G G + V + L ++ + +E+
Sbjct: 117 -GADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 175
>d2v4ja3 d.134.1.1 (A:168-241,A:323-437) Dissimilatory sulfite
reductase subunit alpha, DsrA {Desulfovibrio vulgaris
[TaxId: 881]}
Length = 189
Score = 32.6 bits (74), Expect = 0.038
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 11 IVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREALRRIGLE 70
I+ G +GSL A + + E E I + + EGK+ R E ++R+ +
Sbjct: 87 ILDGAQMGSLLVPFVAAEEPFDEIKEVVEKIWDWWMEEGKNRE-----RLGETMKRLSFQ 141
Query: 71 DKLLAHGIPMRARMI 85
L I + +
Sbjct: 142 KLLEVTEIAPVPQHV 156
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 32.3 bits (72), Expect = 0.048
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40
V I+G G +GS + N EV ++ D
Sbjct: 3 VSILGAGAMGSALSVPLVDNGNEVRIWGTEFD 34
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 32.3 bits (72), Expect = 0.049
Identities = 7/40 (17%), Positives = 17/40 (42%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNS 44
+ KSV+++G G V + + + +V + +
Sbjct: 1 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKK 40
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 32.1 bits (71), Expect = 0.061
Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 11/120 (9%)
Query: 1 MKCNSKKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEAREDIRNSGLSEGKSINLALSV 58
MK V+++G G + E+ YE + I S LS G + L V
Sbjct: 1 MK------VIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI--SFLSAGMQLYLEGKV 52
Query: 59 RGREALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQH 118
+ ++R + +K+ + G+ + + E +
Sbjct: 53 KDVNSVRYM-TGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISP 111
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE
{Escherichia coli [TaxId: 562]}
Length = 167
Score = 31.8 bits (71), Expect = 0.067
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Query: 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARED 40
MK + ++G G +G L K +EV +
Sbjct: 1 MK------ITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 32.3 bits (72), Expect = 0.085
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR-NSGLSEG 49
VVI+G G G +A +V L E N+ L+ G
Sbjct: 26 VVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAG 67
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 32.2 bits (71), Expect = 0.10
Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 9 VVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDI 41
V++VG G+ G +A ++ ++ + EA + I
Sbjct: 3 VIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 36
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 31.7 bits (71), Expect = 0.11
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
V++VG G G + + V++ E D+
Sbjct: 10 VLVVGAGFSGLYALYRLRELGRSVHVIETAGDV 42
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 137
Score = 30.9 bits (69), Expect = 0.12
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVN 33
KS+ I+GGG +GS AC + +
Sbjct: 36 EVKSITIIGGGFLGSELACALGRKARALG 64
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 31.7 bits (70), Expect = 0.12
Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 9 VVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDIRNSGLS 47
+VI+G G+VG+ A + + + + G +
Sbjct: 4 IVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGST 43
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 31.5 bits (70), Expect = 0.15
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR-NSGLSEG 49
V++VG G G ++ K V L + NS +S G
Sbjct: 22 VLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAG 63
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 30.5 bits (67), Expect = 0.19
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKN--QYEVNLYEARE 39
+ + VV+VGGG G+ +A EV L E
Sbjct: 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase,
BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 121
Score = 29.7 bits (66), Expect = 0.20
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 6 KKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39
+ ++IVGGG++G A V+L E +
Sbjct: 30 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQP 63
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 30.6 bits (68), Expect = 0.24
Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR-NSGLSEGKSINLALS 57
V+I+G G G LS + +Q++V + ++ ++G I
Sbjct: 10 VLIIGSGAAG-LSLALRLADQHQVIVLSKGPVTEGSTFYAQG-GIAAVFD 57
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 29.7 bits (66), Expect = 0.27
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEAREDI 41
MK N VV++G G VG+ E+ L +A E
Sbjct: 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK 43
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 29.5 bits (65), Expect = 0.28
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEG 49
K ++G G G + +EV + E+ N+ S
Sbjct: 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYA 43
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 123
Score = 29.4 bits (65), Expect = 0.28
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39
+VV++G G +G +A FAK +V + + +
Sbjct: 31 NNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 63
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas
putida [TaxId: 303]}
Length = 133
Score = 29.5 bits (65), Expect = 0.34
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39
+ +V++GGG +G A K V L +
Sbjct: 34 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA 68
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 29.9 bits (66), Expect = 0.49
Identities = 5/29 (17%), Positives = 13/29 (44%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEA 37
+++G G G+++A + + E
Sbjct: 10 ALVIGSGYGGAVAALRLTQAGIPTQIVEM 38
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 122
Score = 28.9 bits (64), Expect = 0.50
Identities = 13/57 (22%), Positives = 18/57 (31%)
Query: 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRG 60
+ +I+GGG +G A A+ Y V L I L G
Sbjct: 30 ENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETG 86
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 30.0 bits (66), Expect = 0.50
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEA 37
V++G G ++SA + + + E
Sbjct: 5 AVVIGTGYGAAVSALRLGEAGVQTLMLEM 33
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 132
Score = 28.7 bits (63), Expect = 0.59
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRN 43
++I G G VG A ++ +++ L + +DI
Sbjct: 3 IIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICK 37
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme
M oxidoreductase/carboxylase {Xanthobacter sp., py2
[TaxId: 35809]}
Length = 121
Score = 28.4 bits (62), Expect = 0.64
Identities = 7/25 (28%), Positives = 9/25 (36%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYE 31
+VV+VGG C F
Sbjct: 23 STVVVVGGSKTAVEYGCFFNATGRR 47
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase
{White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 29.6 bits (65), Expect = 0.65
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRN 43
VVIVG G +G A Y+V +++ E
Sbjct: 7 VVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 41
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId:
9823]}
Length = 196
Score = 29.0 bits (63), Expect = 0.66
Identities = 7/39 (17%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 6 KKSVVIVGGGLVGSLSACMFAKNQY-EVNLYEAREDIRN 43
+ ++G G A A+ Y ++ ++E +E +
Sbjct: 4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGG 42
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite
reductase {Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 28.5 bits (62), Expect = 0.85
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRN 43
VVIVG G G A ++ YEV + +
Sbjct: 3 VVIVGNGPGGFELAKQLSQT-YEVTVIDKEPVPYY 36
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 28.7 bits (63), Expect = 1.0
Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 10/97 (10%)
Query: 1 MKCNSKKSVVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDIRNSGLSEGKSINLALSV 58
+ + V+IVG G G +A + AKN+ +V + E+ G+ +
Sbjct: 45 LDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFS----- 99
Query: 59 RGREALRRIGLEDKLLAHGIPMRARMIHGQNGKLREI 95
+ R L IP +
Sbjct: 100 ---AMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALF 133
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 28.6 bits (62), Expect = 1.2
Identities = 16/191 (8%), Positives = 45/191 (23%), Gaps = 4/191 (2%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR-NSGLSEGKSINLAL--SVRGREALR 65
+++GGGL G +A + + R +S ++G + +L S
Sbjct: 8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQG-GMQASLGNSKMSDGDNE 66
Query: 66 RIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHKLINLDV 125
+ D + ++ + + V + + +
Sbjct: 67 DLHFMDTVKGSDWGCDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTI 126
Query: 126 NSGNVTFYRTEDNSETKITDNQLIIGADGAYSGVRKCLMKQSMFNYSQTYIEHGYMELCI 185
+ + AD + + + + + L
Sbjct: 127 TEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLFAVANECLKLGVSIQDRKEAIALIH 186
Query: 186 PPSEDNEVWLY 196
+ +
Sbjct: 187 QDGKCYGAVVR 197
>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 216
Score = 28.3 bits (62), Expect = 1.4
Identities = 23/155 (14%), Positives = 44/155 (28%), Gaps = 5/155 (3%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRGREAL 64
S V++G G V A + + + + + S G + + RG
Sbjct: 38 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQA 97
Query: 65 RRIGLEDKLLAH-----GIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQHK 119
LE + LA + A + + + N L Y D H+
Sbjct: 98 AFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHR 157
Query: 120 LINLDVNSGNVTFYRTEDNSETKITDNQLIIGADG 154
+ + + + N+L+ G
Sbjct: 158 RMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSG 192
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 122
Score = 27.4 bits (60), Expect = 1.4
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRN 43
++VG V A A +V + +R
Sbjct: 21 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG 57
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 28.3 bits (62), Expect = 1.5
Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 4/120 (3%)
Query: 1 MKCNSKK-SVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIR-NSGLSEGKSINLALSV 58
MK ++ V++G G G +A +++ L R ++ ++G I +AL
Sbjct: 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGG-ITVALGN 59
Query: 59 RGREALRRIGLEDKLLAHGIPMRARMIHGQNGKLREIPYDPVHNQVELEQYPDCNIYFQH 118
+ + D + I E + H + + D IY +
Sbjct: 60 THEDNWEWH-MYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRP 118
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia
fasciculata [TaxId: 5656]}
Length = 117
Score = 27.1 bits (59), Expect = 1.5
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39
K + VGGG + A +F + +
Sbjct: 19 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAY 51
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 27.9 bits (61), Expect = 1.9
Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 7/117 (5%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINLALSVRG------RE 62
VVI+GGG G ++A A+ ++ E R + + L+ G + AL +
Sbjct: 6 VVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKH 65
Query: 63 ALRRIGLEDKLLAHGIPMRARMIHGQNGKLRE-IPYDPVHNQVELEQYPDCNIYFQH 118
+ G++ + + L I N+V + +
Sbjct: 66 SFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSE 122
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 27.6 bits (60), Expect = 2.0
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 9 VVIVGGGLVGSLSACMFAKNQ--YEVNLYEAREDI 41
+ +VG G G +A K+ V++YE +
Sbjct: 4 ICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 38
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 27.9 bits (61), Expect = 2.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
VVI+GGG G ++A A+ + E R +
Sbjct: 8 VVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 202
Score = 27.3 bits (59), Expect = 2.8
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYE 36
+ I G G VG++ A + +EV +
Sbjct: 3 ISIFGLGYVGAVCAGCLSARGHEVIGVD 30
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 27.2 bits (59), Expect = 3.4
Identities = 5/41 (12%), Positives = 11/41 (26%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEG 49
+ +GGG G + + + + S
Sbjct: 45 AIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNA 85
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 26.5 bits (58), Expect = 3.8
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEARED 40
S+ + +VG G VG A E+ L +A D
Sbjct: 18 SRCKITVVGVGDVGMACAISILLKGLADELALVDADTD 55
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 26.7 bits (57), Expect = 4.5
Identities = 5/29 (17%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 5 SKKSVVIVGG-GLVGSLSACMFAKNQYEV 32
S+ ++++G G +G A +
Sbjct: 2 SRSRILLIGATGYIGRHVAKASLDLGHPT 30
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 115
Score = 25.9 bits (56), Expect = 4.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 7 KSVVIVGGGLVGSLSACMFAKNQYEVNLY 35
+ +V+VGGG +G + K +V++
Sbjct: 22 QHLVVVGGGYIGLELGIAYRKLGAQVSVV 50
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 26.2 bits (57), Expect = 4.8
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEAREDIRNS 44
+ +VG G VG A E+ L + ED
Sbjct: 19 PNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKG 60
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide
reductase subunit F (AhpF), C-terminal domains
{Escherichia coli [TaxId: 562]}
Length = 184
Score = 26.2 bits (56), Expect = 4.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38
V+IVG G G+ +A A+ L R
Sbjct: 4 VLIVGSGPAGAAAAIYSARKGIRTGLMGER 33
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1
{Salmonella typhimurium [TaxId: 90371]}
Length = 113
Score = 25.8 bits (56), Expect = 5.1
Identities = 8/50 (16%), Positives = 18/50 (36%)
Query: 5 SKKSVVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNSGLSEGKSINL 54
+ +IVGGG V A + + + + + + + + L
Sbjct: 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTL 60
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 26.4 bits (57), Expect = 5.2
Identities = 6/27 (22%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 1 MKCNSKKSVVIVGGGLVGSLSACMFAK 27
++ ++ + + IVG G +A ++A
Sbjct: 1 LETHNTR-LCIVGSGPAA-HTAAIYAA 25
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 26.2 bits (57), Expect = 5.2
Identities = 10/39 (25%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 6 KKSVVIVGGGLVGS-LSACMFAKNQYEVNLYEAREDIRN 43
K +V+VG G++G ++ + KN +V L++ +++ +
Sbjct: 3 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPH 41
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase,
middle domain {Methylophilus methylotrophus, w3a1
[TaxId: 17]}
Length = 233
Score = 26.3 bits (56), Expect = 5.6
Identities = 6/36 (16%), Positives = 11/36 (30%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDIRNS 44
+I G A + ++ + RE I
Sbjct: 183 RLIADATFTGHRVAREIEEANPQIAIPYKRETIAWG 218
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 25.7 bits (56), Expect = 5.7
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 6 KKSVVIVGGGLVGSLSACMFAKNQY--EVNLYEAREDI 41
+ V I+G G VG+ +A A Q E+ L + ++
Sbjct: 1 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK 38
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 26.4 bits (57), Expect = 5.8
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAR 38
+++GGG G SA A+ + E+
Sbjct: 6 YLVIGGGSGGLASARRAAELGARAAVVESH 35
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus
viridans [TaxId: 1377]}
Length = 177
Score = 25.8 bits (55), Expect = 6.6
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 4 NSKKSVVIVGGGLVGSLSACMFAKNQYEVNLY 35
NSK+ V+ G G +G A + + +
Sbjct: 20 NSKRPVIYAGIGTMGHGPAVQELARKIKAPVI 51
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 25.4 bits (55), Expect = 8.8
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 KKSVVIVGGGLVGS-LSACMFAKNQYEVNLYEARED 40
+K + I+G G VGS + + AK ++ L + E
Sbjct: 1 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEG 36
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 25.7 bits (55), Expect = 8.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEAREDI 41
VV++GGG G +A A +V + E + +
Sbjct: 9 VVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41
>d1jhda1 b.122.1.3 (A:1-173) ATP sulfurylase N-terminal domain
{Sulfur-oxidizing endosymbiont of Riftia pachyptila
[TaxId: 35843]}
Length = 173
Score = 25.3 bits (55), Expect = 9.1
Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 8/125 (6%)
Query: 198 NRLLSSVPEVRKRISLRAQSLKSLMNFPRA--------DQGGDKRDCLLHEGTSRILVPN 249
L PE ++S A+SL S++ +A ++ +
Sbjct: 11 KPLFVYDPEEHHKLSHEAESLPSVVISSQAAGNAVMMGAGYFSPLQGFMNVADAMGAAEK 70
Query: 250 MRLSNHLDRDQPCKPLLDFKNPIKIQSHAVVNEFYKQESLIVASLCQEKIEKMFDNTSTY 309
M LS+ P LL+ + I + + + + ++A + E IE++ D
Sbjct: 71 MTLSDGSFFPVPVLCLLENTDAIGDAKRIALRDPNVEGNPVLAVMDIEAIEEVSDEQMAV 130
Query: 310 KSRHI 314
+ +
Sbjct: 131 MTDKV 135
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 25.7 bits (55), Expect = 9.1
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 9 VVIVGGGLVGSLSACMFAKNQYEVNLYEARE 39
+ +GGG G S A + L EA+E
Sbjct: 5 YIAIGGGSGGIASINRAAMYGQKCALIEAKE 35
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.395
Gapped
Lambda K H
0.267 0.0458 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,366,762
Number of extensions: 62998
Number of successful extensions: 326
Number of sequences better than 10.0: 1
Number of HSP's gapped: 321
Number of HSP's successfully gapped: 90
Length of query: 379
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 292
Effective length of database: 1,213,086
Effective search space: 354221112
Effective search space used: 354221112
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.2 bits)