Query psy9143
Match_columns 100
No_of_seqs 127 out of 2265
Neff 10.3
Searched_HMMs 46136
Date Fri Aug 16 20:03:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9143.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9143hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0300 DltE Short-chain dehyd 99.9 2E-21 4.4E-26 121.0 10.2 86 6-100 3-92 (265)
2 COG4221 Short-chain alcohol de 99.9 2.1E-21 4.6E-26 118.8 9.6 86 6-100 3-89 (246)
3 KOG1205|consensus 99.8 7E-21 1.5E-25 119.5 7.8 88 4-100 7-99 (282)
4 COG3967 DltE Short-chain dehyd 99.8 4.3E-19 9.2E-24 106.3 8.5 85 6-100 2-86 (245)
5 PRK07533 enoyl-(acyl carrier p 99.8 1.5E-18 3.3E-23 108.4 10.2 93 1-100 2-96 (258)
6 PRK05854 short chain dehydroge 99.8 1.9E-18 4.2E-23 110.7 10.5 87 5-100 10-101 (313)
7 KOG1201|consensus 99.8 2E-18 4.3E-23 108.3 9.2 86 6-100 35-122 (300)
8 PRK05872 short chain dehydroge 99.8 4.4E-18 9.6E-23 108.2 10.9 90 2-100 2-93 (296)
9 PRK08265 short chain dehydroge 99.8 2.9E-18 6.3E-23 107.2 9.8 86 6-100 3-88 (261)
10 PRK07478 short chain dehydroge 99.8 4.4E-18 9.5E-23 105.9 10.4 87 5-100 2-91 (254)
11 PRK12481 2-deoxy-D-gluconate 3 99.8 2.9E-18 6.2E-23 106.8 9.5 89 4-100 3-91 (251)
12 PRK06200 2,3-dihydroxy-2,3-dih 99.8 3.9E-18 8.6E-23 106.6 10.1 86 6-100 3-88 (263)
13 KOG0725|consensus 99.8 8.9E-18 1.9E-22 105.8 11.1 88 4-100 3-97 (270)
14 PRK08085 gluconate 5-dehydroge 99.8 7E-18 1.5E-22 105.0 10.5 91 1-100 1-94 (254)
15 PRK08594 enoyl-(acyl carrier p 99.8 4.6E-18 9.9E-23 106.3 9.6 90 5-100 3-95 (257)
16 PRK05867 short chain dehydroge 99.8 6.9E-18 1.5E-22 105.0 10.3 88 4-100 4-94 (253)
17 TIGR03325 BphB_TodD cis-2,3-di 99.8 4.9E-18 1.1E-22 106.2 9.5 86 6-100 2-87 (262)
18 PRK07889 enoyl-(acyl carrier p 99.8 5.8E-18 1.3E-22 105.8 9.7 87 7-100 5-93 (256)
19 PRK08862 short chain dehydroge 99.8 6.2E-18 1.3E-22 104.2 9.7 86 6-100 2-91 (227)
20 PRK05717 oxidoreductase; Valid 99.8 6.8E-18 1.5E-22 105.1 9.9 89 3-100 4-92 (255)
21 PRK05876 short chain dehydroge 99.8 7.5E-18 1.6E-22 106.3 10.2 86 6-100 3-91 (275)
22 PRK08415 enoyl-(acyl carrier p 99.8 5E-18 1.1E-22 107.1 9.1 87 7-100 3-91 (274)
23 PRK08303 short chain dehydroge 99.8 9.8E-18 2.1E-22 107.2 10.5 96 5-100 4-103 (305)
24 PRK08416 7-alpha-hydroxysteroi 99.8 1.1E-17 2.4E-22 104.5 10.4 88 5-100 4-95 (260)
25 PRK06114 short chain dehydroge 99.8 1.3E-17 2.8E-22 103.9 10.6 91 2-100 1-94 (254)
26 PRK06079 enoyl-(acyl carrier p 99.8 6.9E-18 1.5E-22 105.2 9.3 84 7-100 5-91 (252)
27 PRK08589 short chain dehydroge 99.8 1.7E-17 3.8E-22 104.3 10.5 85 6-100 3-90 (272)
28 PRK07063 short chain dehydroge 99.8 1.5E-17 3.2E-22 103.8 10.1 86 6-100 4-94 (260)
29 PRK07062 short chain dehydroge 99.8 1.5E-17 3.3E-22 104.0 10.1 87 5-100 4-95 (265)
30 PRK08277 D-mannonate oxidoredu 99.8 1.6E-17 3.4E-22 104.6 10.2 91 1-100 2-95 (278)
31 PRK08339 short chain dehydroge 99.8 1.5E-17 3.3E-22 104.2 10.0 86 5-100 4-93 (263)
32 PRK06196 oxidoreductase; Provi 99.8 1.8E-17 4E-22 106.2 10.3 86 5-100 22-107 (315)
33 PRK06197 short chain dehydroge 99.8 1.8E-17 3.9E-22 105.7 10.2 87 5-100 12-103 (306)
34 PRK06139 short chain dehydroge 99.7 3E-17 6.4E-22 106.0 11.1 86 6-100 4-92 (330)
35 PRK07067 sorbitol dehydrogenas 99.7 1.9E-17 4E-22 103.2 9.8 86 6-100 3-88 (257)
36 PRK07576 short chain dehydroge 99.7 3.3E-17 7.2E-22 102.7 10.8 91 1-100 1-94 (264)
37 PRK06505 enoyl-(acyl carrier p 99.7 2.7E-17 5.9E-22 103.6 10.3 87 7-100 5-93 (271)
38 PRK07523 gluconate 5-dehydroge 99.7 3.1E-17 6.7E-22 102.1 10.3 88 4-100 5-95 (255)
39 PRK07791 short chain dehydroge 99.7 3E-17 6.5E-22 104.0 10.3 95 6-100 3-100 (286)
40 KOG1208|consensus 99.7 2.6E-17 5.7E-22 105.4 9.9 87 5-100 31-122 (314)
41 PRK07109 short chain dehydroge 99.7 4.1E-17 9E-22 105.4 10.7 87 5-100 4-93 (334)
42 PRK07825 short chain dehydroge 99.7 3.7E-17 8E-22 102.7 10.2 85 6-100 2-86 (273)
43 PRK06720 hypothetical protein; 99.7 4E-17 8.7E-22 96.7 9.6 87 5-100 12-101 (169)
44 PRK07370 enoyl-(acyl carrier p 99.7 4.6E-17 1E-21 101.8 10.4 92 5-100 2-95 (258)
45 PRK08690 enoyl-(acyl carrier p 99.7 2.2E-17 4.8E-22 103.4 8.8 87 7-100 4-92 (261)
46 PRK06194 hypothetical protein; 99.7 4.1E-17 8.8E-22 103.1 10.0 86 6-100 3-91 (287)
47 PRK07984 enoyl-(acyl carrier p 99.7 5.7E-17 1.2E-21 101.8 10.4 87 7-100 4-92 (262)
48 PRK06935 2-deoxy-D-gluconate 3 99.7 3.5E-17 7.6E-22 102.1 9.3 86 5-100 11-99 (258)
49 PLN02253 xanthoxin dehydrogena 99.7 4.7E-17 1E-21 102.5 9.9 86 6-100 15-102 (280)
50 PRK07035 short chain dehydroge 99.7 6.8E-17 1.5E-21 100.4 10.4 88 4-100 3-93 (252)
51 PRK05866 short chain dehydroge 99.7 1E-16 2.2E-21 102.0 11.3 87 5-100 36-125 (293)
52 PRK08159 enoyl-(acyl carrier p 99.7 2.9E-17 6.3E-22 103.5 8.7 87 7-100 8-96 (272)
53 PRK07774 short chain dehydroge 99.7 7.4E-17 1.6E-21 100.0 10.2 87 5-100 2-91 (250)
54 PRK06603 enoyl-(acyl carrier p 99.7 3.6E-17 7.9E-22 102.4 8.6 87 7-100 6-94 (260)
55 PRK06500 short chain dehydroge 99.7 7.1E-17 1.5E-21 99.9 9.8 86 6-100 3-88 (249)
56 PRK07453 protochlorophyllide o 99.7 6.2E-17 1.3E-21 104.0 9.8 86 6-100 3-91 (322)
57 PRK07814 short chain dehydroge 99.7 8.4E-17 1.8E-21 100.7 10.1 89 3-100 4-95 (263)
58 PRK07890 short chain dehydroge 99.7 9.9E-17 2.1E-21 99.8 10.3 85 7-100 3-90 (258)
59 TIGR01832 kduD 2-deoxy-D-gluco 99.7 6E-17 1.3E-21 100.3 9.3 87 6-100 2-88 (248)
60 PRK07097 gluconate 5-dehydroge 99.7 1.1E-16 2.3E-21 100.3 10.3 89 3-100 4-95 (265)
61 PRK09186 flagellin modificatio 99.7 1.1E-16 2.5E-21 99.4 10.4 85 7-100 2-91 (256)
62 PRK08278 short chain dehydroge 99.7 1.7E-16 3.8E-21 99.9 10.8 94 5-100 2-98 (273)
63 PRK06138 short chain dehydroge 99.7 1.1E-16 2.4E-21 99.2 9.6 86 6-100 2-89 (252)
64 PRK06997 enoyl-(acyl carrier p 99.7 9.1E-17 2E-21 100.6 9.2 87 7-100 4-92 (260)
65 PRK08993 2-deoxy-D-gluconate 3 99.7 1E-16 2.2E-21 99.8 9.3 89 4-100 5-93 (253)
66 PRK07231 fabG 3-ketoacyl-(acyl 99.7 1.4E-16 3.1E-21 98.6 9.8 86 6-100 2-89 (251)
67 PRK09242 tropinone reductase; 99.7 1.5E-16 3.3E-21 99.1 9.9 89 3-100 3-96 (257)
68 PRK08642 fabG 3-ketoacyl-(acyl 99.7 1.7E-16 3.6E-21 98.5 9.7 87 6-100 2-89 (253)
69 PRK12936 3-ketoacyl-(acyl-carr 99.7 1.8E-16 3.9E-21 97.9 9.8 86 6-100 3-88 (245)
70 PRK06172 short chain dehydroge 99.7 2.3E-16 5E-21 98.0 10.3 86 6-100 4-92 (253)
71 PRK06484 short chain dehydroge 99.7 1.2E-16 2.5E-21 108.1 9.6 85 7-100 267-351 (520)
72 PRK07985 oxidoreductase; Provi 99.7 1.6E-16 3.4E-21 101.1 9.6 88 6-100 46-136 (294)
73 PRK07792 fabG 3-ketoacyl-(acyl 99.7 2.1E-16 4.6E-21 101.0 10.2 87 5-100 8-97 (306)
74 PRK06484 short chain dehydroge 99.7 1.4E-16 3E-21 107.7 9.7 85 7-100 3-87 (520)
75 PRK06949 short chain dehydroge 99.7 3.6E-16 7.8E-21 97.3 10.8 91 1-100 1-94 (258)
76 PRK06398 aldose dehydrogenase; 99.7 1.5E-16 3.2E-21 99.5 9.0 78 6-100 3-80 (258)
77 PRK06124 gluconate 5-dehydroge 99.7 3.6E-16 7.8E-21 97.3 10.7 88 4-100 6-96 (256)
78 PRK08643 acetoin reductase; Va 99.7 2.4E-16 5.3E-21 98.1 9.9 83 9-100 2-87 (256)
79 TIGR01289 LPOR light-dependent 99.7 1.9E-16 4.1E-21 101.6 9.6 84 8-100 2-89 (314)
80 PRK08340 glucose-1-dehydrogena 99.7 2.3E-16 5.1E-21 98.5 9.7 81 11-100 2-84 (259)
81 PRK07024 short chain dehydroge 99.7 1.6E-16 3.6E-21 99.1 9.0 83 9-100 2-86 (257)
82 PRK12823 benD 1,6-dihydroxycyc 99.7 1.6E-16 3.4E-21 99.1 8.9 85 6-100 5-92 (260)
83 PF00106 adh_short: short chai 99.7 1.2E-16 2.6E-21 93.7 7.9 84 10-100 1-88 (167)
84 PRK06128 oxidoreductase; Provi 99.7 4.1E-16 8.9E-21 99.4 10.9 88 6-100 52-142 (300)
85 PRK06171 sorbitol-6-phosphate 99.7 2E-16 4.4E-21 99.0 9.4 85 1-100 1-85 (266)
86 PRK06180 short chain dehydroge 99.7 2.1E-16 4.5E-21 99.6 9.4 84 8-100 3-86 (277)
87 PLN02730 enoyl-[acyl-carrier-p 99.7 2.9E-16 6.2E-21 100.4 10.0 87 4-100 4-128 (303)
88 KOG4169|consensus 99.7 5.3E-17 1.1E-21 98.7 6.2 90 5-100 1-91 (261)
89 PRK08213 gluconate 5-dehydroge 99.7 3.2E-16 7E-21 97.7 10.0 87 5-100 8-97 (259)
90 PRK06523 short chain dehydroge 99.7 1.5E-16 3.3E-21 99.2 8.5 85 1-100 1-85 (260)
91 PRK08628 short chain dehydroge 99.7 3.2E-16 7E-21 97.6 9.9 86 5-100 3-91 (258)
92 PRK07856 short chain dehydroge 99.7 1.7E-16 3.7E-21 98.7 8.5 82 5-100 2-83 (252)
93 PRK06057 short chain dehydroge 99.7 4.2E-16 9.1E-21 97.1 9.8 83 7-100 5-87 (255)
94 PRK06113 7-alpha-hydroxysteroi 99.7 5.6E-16 1.2E-20 96.5 10.3 88 4-100 6-96 (255)
95 PRK12744 short chain dehydroge 99.7 3.8E-16 8.2E-21 97.4 9.5 91 5-100 4-97 (257)
96 PRK05599 hypothetical protein; 99.7 4.8E-16 1E-20 96.6 9.9 81 10-100 1-85 (246)
97 PRK07677 short chain dehydroge 99.7 4.2E-16 9.2E-21 96.9 9.6 83 9-100 1-86 (252)
98 PRK06841 short chain dehydroge 99.7 4.4E-16 9.5E-21 96.8 9.6 86 5-100 11-97 (255)
99 PRK06463 fabG 3-ketoacyl-(acyl 99.7 5.9E-16 1.3E-20 96.4 10.0 84 6-100 4-87 (255)
100 PRK12429 3-hydroxybutyrate deh 99.7 4.8E-16 1E-20 96.6 9.5 85 7-100 2-89 (258)
101 PRK08263 short chain dehydroge 99.7 5.2E-16 1.1E-20 97.7 9.5 84 8-100 2-85 (275)
102 PRK08251 short chain dehydroge 99.7 6.9E-16 1.5E-20 95.6 9.8 83 9-100 2-89 (248)
103 PRK06182 short chain dehydroge 99.7 7.5E-16 1.6E-20 96.8 10.1 81 8-100 2-82 (273)
104 PRK13394 3-hydroxybutyrate deh 99.7 8.2E-16 1.8E-20 95.8 10.1 86 6-100 4-92 (262)
105 PRK08226 short chain dehydroge 99.7 5.7E-16 1.2E-20 96.7 9.3 85 6-100 3-90 (263)
106 PRK05875 short chain dehydroge 99.7 8.2E-16 1.8E-20 96.7 10.1 86 6-100 4-94 (276)
107 PRK12939 short chain dehydroge 99.7 1.1E-15 2.5E-20 94.5 10.6 86 6-100 4-92 (250)
108 PRK07831 short chain dehydroge 99.7 8.4E-16 1.8E-20 96.1 9.9 85 7-100 15-105 (262)
109 PRK08063 enoyl-(acyl carrier p 99.7 9E-16 1.9E-20 95.1 9.9 85 7-100 2-90 (250)
110 PRK09134 short chain dehydroge 99.7 9.9E-16 2.1E-20 95.5 10.1 87 6-100 6-95 (258)
111 PRK07806 short chain dehydroge 99.7 1.2E-15 2.6E-20 94.5 10.4 87 6-100 3-92 (248)
112 PRK12384 sorbitol-6-phosphate 99.7 9.3E-16 2E-20 95.6 9.9 83 9-100 2-89 (259)
113 KOG1200|consensus 99.7 4.8E-16 1E-20 92.9 8.1 86 6-100 11-98 (256)
114 TIGR02632 RhaD_aldol-ADH rhamn 99.7 1.1E-15 2.4E-20 106.3 11.1 89 3-100 408-501 (676)
115 PRK07454 short chain dehydroge 99.7 1.3E-15 2.9E-20 94.0 10.3 84 8-100 5-91 (241)
116 PRK07326 short chain dehydroge 99.7 1.3E-15 2.9E-20 93.7 10.2 86 6-100 3-90 (237)
117 PRK07666 fabG 3-ketoacyl-(acyl 99.7 1.3E-15 2.7E-20 94.0 10.1 85 7-100 5-92 (239)
118 PRK12935 acetoacetyl-CoA reduc 99.7 1.5E-15 3.2E-20 94.1 10.3 87 6-100 3-92 (247)
119 PRK09072 short chain dehydroge 99.7 1.2E-15 2.6E-20 95.4 9.7 85 6-100 2-88 (263)
120 PRK06482 short chain dehydroge 99.7 1E-15 2.2E-20 96.3 9.3 83 9-100 2-84 (276)
121 PRK12937 short chain dehydroge 99.7 2.7E-15 5.7E-20 92.7 10.9 87 6-100 2-91 (245)
122 PRK06483 dihydromonapterin red 99.7 1.1E-15 2.3E-20 94.3 9.1 81 9-100 2-82 (236)
123 PRK12826 3-ketoacyl-(acyl-carr 99.7 1.8E-15 3.9E-20 93.6 10.1 86 6-100 3-91 (251)
124 PRK12938 acetyacetyl-CoA reduc 99.7 2.7E-15 5.9E-20 92.8 10.8 86 7-100 1-89 (246)
125 PRK12743 oxidoreductase; Provi 99.7 2.9E-15 6.3E-20 93.4 10.9 84 9-100 2-88 (256)
126 PRK08217 fabG 3-ketoacyl-(acyl 99.7 2.3E-15 5E-20 93.2 10.2 86 6-100 2-90 (253)
127 PRK09135 pteridine reductase; 99.7 2.7E-15 6E-20 92.7 10.5 86 7-100 4-93 (249)
128 PRK08936 glucose-1-dehydrogena 99.7 3.7E-15 8E-20 93.1 11.1 87 6-100 4-93 (261)
129 PRK06179 short chain dehydroge 99.7 1E-15 2.2E-20 96.0 8.5 79 8-100 3-81 (270)
130 PRK08267 short chain dehydroge 99.7 1.8E-15 4E-20 94.4 9.6 82 10-100 2-85 (260)
131 PRK12828 short chain dehydroge 99.7 3.7E-15 8E-20 91.6 10.8 86 6-100 4-90 (239)
132 TIGR03206 benzo_BadH 2-hydroxy 99.6 2.7E-15 5.8E-20 92.9 10.0 85 7-100 1-88 (250)
133 PRK05855 short chain dehydroge 99.6 2.6E-15 5.6E-20 102.2 10.4 86 6-100 312-400 (582)
134 PRK06914 short chain dehydroge 99.6 2.6E-15 5.7E-20 94.5 9.8 83 8-100 2-89 (280)
135 PRK10538 malonic semialdehyde 99.6 2.7E-15 5.8E-20 93.2 9.5 81 11-100 2-82 (248)
136 PRK12859 3-ketoacyl-(acyl-carr 99.6 7.3E-15 1.6E-19 91.7 11.4 95 6-100 3-104 (256)
137 PRK06701 short chain dehydroge 99.6 2.1E-15 4.6E-20 95.8 9.0 87 6-100 43-132 (290)
138 PRK05993 short chain dehydroge 99.6 2.8E-15 6.1E-20 94.5 9.4 81 8-100 3-84 (277)
139 PRK05653 fabG 3-ketoacyl-(acyl 99.6 4.3E-15 9.4E-20 91.5 10.0 86 6-100 2-90 (246)
140 PRK05565 fabG 3-ketoacyl-(acyl 99.6 4.4E-15 9.6E-20 91.7 10.0 86 6-100 2-91 (247)
141 PRK07832 short chain dehydroge 99.6 5.7E-15 1.2E-19 92.9 10.4 82 10-100 1-86 (272)
142 PRK06198 short chain dehydroge 99.6 7E-15 1.5E-19 91.7 10.7 87 5-100 2-92 (260)
143 TIGR02685 pter_reduc_Leis pter 99.6 4.2E-15 9E-20 93.3 9.7 83 10-100 2-92 (267)
144 PRK06077 fabG 3-ketoacyl-(acyl 99.6 8.6E-15 1.9E-19 90.8 10.9 88 5-100 2-92 (252)
145 PRK06123 short chain dehydroge 99.6 5.8E-15 1.3E-19 91.4 10.1 84 9-100 2-88 (248)
146 PRK12827 short chain dehydroge 99.6 3.3E-15 7.2E-20 92.3 8.9 90 6-100 3-95 (249)
147 PRK07775 short chain dehydroge 99.6 7E-15 1.5E-19 92.6 10.5 85 7-100 8-95 (274)
148 PRK12829 short chain dehydroge 99.6 5.3E-15 1.2E-19 92.2 9.8 86 6-100 8-94 (264)
149 PRK08703 short chain dehydroge 99.6 1.1E-14 2.4E-19 89.9 11.1 86 6-100 3-95 (239)
150 PRK07201 short chain dehydroge 99.6 3.3E-15 7.1E-20 103.4 9.6 86 6-100 368-456 (657)
151 PRK05693 short chain dehydroge 99.6 4.8E-15 1E-19 93.2 9.5 79 10-100 2-80 (274)
152 PRK12746 short chain dehydroge 99.6 7.3E-15 1.6E-19 91.3 10.2 85 7-100 4-98 (254)
153 PRK05650 short chain dehydroge 99.6 5.3E-15 1.2E-19 92.8 9.6 82 10-100 1-85 (270)
154 PRK12745 3-ketoacyl-(acyl-carr 99.6 6.3E-15 1.4E-19 91.6 9.9 84 9-100 2-88 (256)
155 PRK12748 3-ketoacyl-(acyl-carr 99.6 3.9E-15 8.5E-20 92.8 8.8 95 6-100 2-103 (256)
156 PRK06947 glucose-1-dehydrogena 99.6 7.9E-15 1.7E-19 90.9 10.1 84 9-100 2-88 (248)
157 TIGR02415 23BDH acetoin reduct 99.6 6.3E-15 1.4E-19 91.5 9.7 82 10-100 1-85 (254)
158 COG1028 FabG Dehydrogenases wi 99.6 6.8E-15 1.5E-19 91.3 9.8 88 6-100 2-94 (251)
159 PRK07904 short chain dehydroge 99.6 6.2E-15 1.4E-19 92.0 9.6 84 8-100 7-95 (253)
160 PRK06940 short chain dehydroge 99.6 6.8E-15 1.5E-19 92.8 9.6 80 9-100 2-84 (275)
161 PRK08220 2,3-dihydroxybenzoate 99.6 4.6E-15 9.9E-20 92.0 8.5 81 5-100 4-84 (252)
162 PRK05557 fabG 3-ketoacyl-(acyl 99.6 1.4E-14 3E-19 89.4 10.2 87 6-100 2-91 (248)
163 PRK08945 putative oxoacyl-(acy 99.6 1.7E-14 3.7E-19 89.5 10.6 86 6-100 9-100 (247)
164 PRK07074 short chain dehydroge 99.6 1.2E-14 2.5E-19 90.6 9.7 83 9-100 2-85 (257)
165 KOG1199|consensus 99.6 3.4E-15 7.4E-20 88.0 6.6 87 5-100 5-91 (260)
166 PRK07060 short chain dehydroge 99.6 1.6E-14 3.4E-19 89.3 9.8 85 1-100 1-85 (245)
167 PRK05786 fabG 3-ketoacyl-(acyl 99.6 1.9E-14 4.1E-19 88.6 10.1 86 6-100 2-89 (238)
168 PRK08324 short chain dehydroge 99.6 1.3E-14 2.9E-19 101.1 10.4 86 6-100 419-506 (681)
169 PLN00015 protochlorophyllide r 99.6 6E-15 1.3E-19 94.4 7.8 79 13-100 1-83 (308)
170 PRK06125 short chain dehydroge 99.6 2.2E-14 4.8E-19 89.5 10.0 82 6-100 4-89 (259)
171 PLN02780 ketoreductase/ oxidor 99.6 1.8E-14 3.8E-19 92.8 9.6 82 8-100 52-140 (320)
172 PRK12747 short chain dehydroge 99.6 4.4E-14 9.6E-19 87.8 11.1 86 7-100 2-96 (252)
173 PRK06181 short chain dehydroge 99.6 3.6E-14 7.7E-19 88.7 10.6 83 9-100 1-86 (263)
174 TIGR01963 PHB_DH 3-hydroxybuty 99.6 2.4E-14 5.1E-19 88.9 9.7 83 9-100 1-86 (255)
175 PRK12825 fabG 3-ketoacyl-(acyl 99.6 1.5E-14 3.3E-19 89.2 8.7 86 7-100 4-92 (249)
176 PRK07069 short chain dehydroge 99.6 3.4E-14 7.3E-19 88.1 10.1 81 12-100 2-87 (251)
177 KOG1014|consensus 99.6 3.2E-14 7E-19 89.9 9.9 81 8-100 48-134 (312)
178 KOG1209|consensus 99.6 2.7E-14 5.8E-19 86.6 8.7 82 8-100 6-89 (289)
179 TIGR01829 AcAcCoA_reduct aceto 99.6 4.7E-14 1E-18 86.9 10.0 83 10-100 1-86 (242)
180 TIGR01500 sepiapter_red sepiap 99.6 2.9E-14 6.3E-19 89.0 9.0 81 11-100 2-95 (256)
181 PRK09730 putative NAD(P)-bindi 99.6 4.5E-14 9.8E-19 87.3 9.8 83 10-100 2-87 (247)
182 PRK08261 fabG 3-ketoacyl-(acyl 99.6 5.8E-14 1.3E-18 93.8 10.3 85 7-100 208-292 (450)
183 PRK12824 acetoacetyl-CoA reduc 99.6 6.1E-14 1.3E-18 86.6 9.5 83 10-100 3-88 (245)
184 KOG1610|consensus 99.6 4.5E-14 9.7E-19 89.4 8.6 86 6-100 26-114 (322)
185 PRK06300 enoyl-(acyl carrier p 99.5 2.6E-14 5.6E-19 91.4 7.1 37 5-41 4-42 (299)
186 PRK13656 trans-2-enoyl-CoA red 99.5 5.6E-14 1.2E-18 91.8 8.6 91 8-100 40-139 (398)
187 PRK12742 oxidoreductase; Provi 99.5 1.1E-13 2.4E-18 85.2 9.6 81 6-100 3-83 (237)
188 TIGR01831 fabG_rel 3-oxoacyl-( 99.5 9E-14 1.9E-18 85.7 8.7 81 12-100 1-84 (239)
189 PRK12367 short chain dehydroge 99.5 7.8E-14 1.7E-18 86.9 7.3 78 5-100 10-87 (245)
190 PRK07102 short chain dehydroge 99.5 2.3E-13 4.9E-18 84.2 9.3 79 10-100 2-84 (243)
191 PRK08264 short chain dehydroge 99.5 1.2E-13 2.7E-18 85.1 7.8 79 5-100 2-81 (238)
192 PRK07424 bifunctional sterol d 99.5 2.8E-13 6.1E-18 89.6 8.8 80 5-100 174-253 (406)
193 PRK05884 short chain dehydroge 99.5 3.7E-13 8E-18 82.7 8.7 76 11-100 2-77 (223)
194 PRK06101 short chain dehydroge 99.5 2.8E-13 6E-18 83.9 8.0 78 10-100 2-79 (240)
195 PRK06924 short chain dehydroge 99.5 3.1E-13 6.7E-18 83.9 8.2 83 10-100 2-88 (251)
196 TIGR01830 3oxo_ACP_reduc 3-oxo 99.5 5.1E-13 1.1E-17 82.1 9.1 81 12-100 1-84 (239)
197 PRK08177 short chain dehydroge 99.5 3.4E-13 7.4E-18 82.7 8.2 78 10-100 2-79 (225)
198 PRK07577 short chain dehydroge 99.5 5.7E-13 1.2E-17 81.9 8.4 75 8-100 2-76 (234)
199 COG0623 FabI Enoyl-[acyl-carri 99.5 6.7E-13 1.5E-17 81.0 8.2 87 6-99 3-91 (259)
200 PF13561 adh_short_C2: Enoyl-( 99.4 2.8E-13 6.1E-18 83.9 6.3 74 16-100 1-81 (241)
201 PF08659 KR: KR domain; Inter 99.4 5.3E-13 1.2E-17 79.8 7.1 84 11-100 2-89 (181)
202 PRK09291 short chain dehydroge 99.4 1.6E-12 3.5E-17 80.8 9.3 77 9-100 2-81 (257)
203 PRK07023 short chain dehydroge 99.4 7.1E-13 1.5E-17 82.0 7.5 79 11-100 3-85 (243)
204 PRK07041 short chain dehydroge 99.4 7.6E-13 1.6E-17 81.2 7.2 75 13-100 1-77 (230)
205 PRK08017 oxidoreductase; Provi 99.4 2.6E-12 5.6E-17 79.9 9.4 79 10-100 3-82 (256)
206 PRK06550 fabG 3-ketoacyl-(acyl 99.4 5.3E-13 1.1E-17 82.1 6.3 74 6-100 2-75 (235)
207 KOG1478|consensus 99.4 2.7E-12 5.8E-17 79.7 9.0 84 8-100 2-97 (341)
208 KOG1611|consensus 99.4 2.9E-12 6.2E-17 78.2 8.4 84 9-100 3-92 (249)
209 PRK06953 short chain dehydroge 99.4 3.5E-12 7.6E-17 78.1 8.3 77 10-100 2-78 (222)
210 smart00822 PKS_KR This enzymat 99.4 1.1E-11 2.5E-16 72.5 9.7 85 10-100 1-89 (180)
211 TIGR02622 CDP_4_6_dhtase CDP-g 99.4 4.6E-12 1E-16 82.3 8.1 82 7-100 2-83 (349)
212 PRK08219 short chain dehydroge 99.4 8.5E-12 1.8E-16 76.2 8.7 77 9-100 3-79 (227)
213 PLN03209 translocon at the inn 99.4 7.2E-12 1.6E-16 85.5 9.0 78 7-100 78-167 (576)
214 KOG1207|consensus 99.3 2.2E-12 4.8E-17 76.2 4.7 82 6-100 4-85 (245)
215 TIGR03589 PseB UDP-N-acetylglu 99.3 1.1E-11 2.4E-16 80.0 8.1 78 7-100 2-82 (324)
216 TIGR01472 gmd GDP-mannose 4,6- 99.3 5.7E-12 1.2E-16 81.6 6.5 82 10-100 1-86 (343)
217 PLN02572 UDP-sulfoquinovose sy 99.3 2.3E-11 5E-16 81.5 9.2 90 6-100 44-144 (442)
218 PLN02653 GDP-mannose 4,6-dehyd 99.3 1.1E-11 2.4E-16 80.2 7.0 86 6-100 3-91 (340)
219 PLN02989 cinnamyl-alcohol dehy 99.3 2E-11 4.3E-16 78.5 7.6 80 8-100 4-85 (325)
220 PLN02240 UDP-glucose 4-epimera 99.3 1.6E-11 3.5E-16 79.6 7.2 85 6-100 2-89 (352)
221 TIGR02813 omega_3_PfaA polyket 99.3 1.9E-11 4.2E-16 94.0 8.3 92 8-100 1996-2129(2582)
222 KOG1210|consensus 99.3 2.9E-11 6.3E-16 76.8 7.4 82 10-100 34-120 (331)
223 PRK07578 short chain dehydroge 99.3 3.1E-11 6.6E-16 72.8 6.9 62 11-100 2-63 (199)
224 PRK08309 short chain dehydroge 99.3 9.3E-11 2E-15 70.0 8.9 79 11-99 2-82 (177)
225 PLN00198 anthocyanidin reducta 99.2 6.7E-11 1.5E-15 76.5 8.3 86 1-100 1-88 (338)
226 KOG1502|consensus 99.2 1.2E-10 2.5E-15 74.9 8.9 79 8-100 5-86 (327)
227 PLN02986 cinnamyl-alcohol dehy 99.2 8.9E-11 1.9E-15 75.5 8.4 80 8-100 4-85 (322)
228 PRK09009 C factor cell-cell si 99.2 5.5E-11 1.2E-15 73.2 6.4 73 10-100 1-75 (235)
229 COG1086 Predicted nucleoside-d 99.2 1.2E-10 2.7E-15 78.9 7.9 80 7-100 248-333 (588)
230 PLN02896 cinnamyl-alcohol dehy 99.2 1.6E-10 3.5E-15 75.2 8.0 77 8-100 9-87 (353)
231 PLN02662 cinnamyl-alcohol dehy 99.2 1.4E-10 3.1E-15 74.3 7.6 80 8-100 3-84 (322)
232 PLN02214 cinnamoyl-CoA reducta 99.2 3.9E-10 8.4E-15 73.3 8.8 79 7-100 8-89 (342)
233 PRK15181 Vi polysaccharide bio 99.1 3.3E-10 7.2E-15 73.7 7.4 85 4-100 10-98 (348)
234 PLN02657 3,8-divinyl protochlo 99.1 7E-10 1.5E-14 73.4 8.4 86 8-100 59-144 (390)
235 PLN02650 dihydroflavonol-4-red 99.1 5.8E-10 1.3E-14 72.5 7.9 77 8-100 4-85 (351)
236 PF02719 Polysacc_synt_2: Poly 99.1 2E-10 4.3E-15 73.0 4.7 75 12-100 1-85 (293)
237 PRK10675 UDP-galactose-4-epime 99.1 1.2E-09 2.6E-14 70.5 8.4 79 11-100 2-81 (338)
238 PLN02686 cinnamoyl-CoA reducta 99.1 1.7E-09 3.6E-14 71.1 8.6 79 5-100 49-136 (367)
239 PLN02427 UDP-apiose/xylose syn 99.0 8.1E-10 1.7E-14 72.8 6.8 77 8-100 13-94 (386)
240 PRK10217 dTDP-glucose 4,6-dehy 99.0 1E-09 2.2E-14 71.4 6.4 79 10-100 2-82 (355)
241 PLN02583 cinnamoyl-CoA reducta 99.0 3.8E-09 8.2E-14 67.5 8.2 79 6-98 3-84 (297)
242 PRK05579 bifunctional phosphop 99.0 2.3E-09 4.9E-14 71.1 7.0 75 6-100 185-275 (399)
243 PLN00141 Tic62-NAD(P)-related 99.0 4.3E-09 9.2E-14 65.7 7.9 77 8-100 16-93 (251)
244 TIGR01181 dTDP_gluc_dehyt dTDP 99.0 2.5E-09 5.3E-14 68.2 6.9 79 11-100 1-81 (317)
245 TIGR02114 coaB_strep phosphopa 99.0 4.6E-09 9.9E-14 65.0 7.7 72 11-100 16-88 (227)
246 COG1087 GalE UDP-glucose 4-epi 99.0 3.1E-09 6.8E-14 67.6 6.9 74 11-100 2-75 (329)
247 KOG1371|consensus 99.0 3.9E-09 8.5E-14 67.6 6.9 82 9-100 2-85 (343)
248 TIGR01179 galE UDP-glucose-4-e 99.0 3.3E-09 7.1E-14 67.8 6.7 77 12-100 2-78 (328)
249 PF01370 Epimerase: NAD depend 98.9 5E-09 1.1E-13 64.3 6.5 73 12-100 1-73 (236)
250 PF13460 NAD_binding_10: NADH( 98.9 7.9E-09 1.7E-13 61.5 6.7 68 12-100 1-68 (183)
251 PRK10084 dTDP-glucose 4,6 dehy 98.9 8.2E-09 1.8E-13 67.1 7.0 77 11-100 2-81 (352)
252 TIGR03466 HpnA hopanoid-associ 98.9 4E-09 8.8E-14 67.6 5.3 71 11-100 2-72 (328)
253 CHL00194 ycf39 Ycf39; Provisio 98.9 1.3E-08 2.8E-13 65.6 7.5 71 11-100 2-72 (317)
254 PRK12548 shikimate 5-dehydroge 98.9 4.4E-08 9.6E-13 62.6 9.4 81 6-100 123-207 (289)
255 PRK11150 rfaD ADP-L-glycero-D- 98.8 1.6E-08 3.5E-13 64.7 6.2 73 12-100 2-76 (308)
256 cd01078 NAD_bind_H4MPT_DH NADP 98.8 1.5E-07 3.3E-12 56.8 9.9 78 6-99 25-104 (194)
257 PRK09987 dTDP-4-dehydrorhamnos 98.8 1.7E-08 3.6E-13 64.6 5.9 61 11-100 2-62 (299)
258 TIGR01214 rmlD dTDP-4-dehydror 98.8 2.4E-08 5.3E-13 63.1 6.0 30 12-41 2-31 (287)
259 PF01073 3Beta_HSD: 3-beta hyd 98.8 1.3E-08 2.9E-13 64.7 4.6 72 13-100 1-74 (280)
260 TIGR01746 Thioester-redct thio 98.8 9.1E-08 2E-12 62.0 8.4 32 11-42 1-34 (367)
261 PLN02695 GDP-D-mannose-3',5'-e 98.7 5.7E-08 1.2E-12 64.0 6.7 34 8-41 20-53 (370)
262 PLN02260 probable rhamnose bio 98.7 5.9E-08 1.3E-12 68.1 7.0 82 7-100 4-88 (668)
263 TIGR00521 coaBC_dfp phosphopan 98.7 9.5E-08 2.1E-12 63.4 7.5 75 6-100 182-273 (390)
264 TIGR02197 heptose_epim ADP-L-g 98.7 9.2E-08 2E-12 61.1 6.9 73 12-100 1-74 (314)
265 PRK11908 NAD-dependent epimera 98.7 7.1E-08 1.5E-12 62.8 6.4 32 10-41 2-34 (347)
266 PRK08125 bifunctional UDP-gluc 98.7 7.1E-08 1.5E-12 67.7 6.2 76 8-100 314-390 (660)
267 PRK05865 hypothetical protein; 98.7 8.7E-08 1.9E-12 68.7 6.6 68 11-100 2-69 (854)
268 PF04321 RmlD_sub_bind: RmlD s 98.7 7.6E-08 1.6E-12 61.4 5.6 58 11-100 2-59 (286)
269 COG1748 LYS9 Saccharopine dehy 98.6 2.2E-07 4.9E-12 61.4 7.2 74 10-100 2-76 (389)
270 TIGR03649 ergot_EASG ergot alk 98.6 7E-08 1.5E-12 61.2 4.7 32 12-43 2-33 (285)
271 PRK07201 short chain dehydroge 98.6 1.9E-07 4E-12 65.3 6.6 79 11-100 2-85 (657)
272 PF01488 Shikimate_DH: Shikima 98.6 9E-07 1.9E-11 50.7 8.1 47 6-62 9-56 (135)
273 COG0451 WcaG Nucleoside-diphos 98.6 2.2E-07 4.9E-12 59.2 5.9 31 12-42 3-33 (314)
274 PLN02778 3,5-epimerase/4-reduc 98.6 5.6E-07 1.2E-11 57.7 7.5 31 9-39 9-39 (298)
275 PLN02725 GDP-4-keto-6-deoxyman 98.5 1E-07 2.2E-12 60.7 4.1 28 13-40 1-28 (306)
276 COG1091 RfbD dTDP-4-dehydrorha 98.5 3.3E-07 7.1E-12 58.2 5.8 56 12-100 3-58 (281)
277 COG1088 RfbB dTDP-D-glucose 4, 98.5 7.8E-07 1.7E-11 56.8 6.7 80 10-100 1-82 (340)
278 PLN02503 fatty acyl-CoA reduct 98.5 1.3E-06 2.9E-11 60.9 8.3 36 7-42 117-155 (605)
279 PLN02206 UDP-glucuronate decar 98.5 6.5E-07 1.4E-11 60.4 6.5 34 8-41 118-151 (442)
280 PLN02166 dTDP-glucose 4,6-dehy 98.5 9.1E-07 2E-11 59.6 6.8 33 9-41 120-152 (436)
281 PLN00016 RNA-binding protein; 98.4 1.2E-06 2.6E-11 57.8 7.1 36 8-43 51-90 (378)
282 KOG1204|consensus 98.4 2.2E-08 4.8E-13 61.5 -1.0 86 8-100 5-90 (253)
283 PLN02996 fatty acyl-CoA reduct 98.4 1.9E-06 4.1E-11 58.9 8.1 37 7-43 9-48 (491)
284 TIGR01777 yfcH conserved hypot 98.4 6.7E-07 1.4E-11 56.5 4.8 32 12-43 1-32 (292)
285 PRK14106 murD UDP-N-acetylmura 98.4 5.1E-06 1.1E-10 56.0 8.5 35 6-41 2-36 (450)
286 PF05368 NmrA: NmrA-like famil 98.3 3.2E-06 6.9E-11 52.2 6.9 70 12-99 1-71 (233)
287 PRK12320 hypothetical protein; 98.3 2.1E-06 4.6E-11 60.7 6.2 31 11-41 2-32 (699)
288 PRK06732 phosphopantothenate-- 98.3 4.5E-06 9.9E-11 51.8 6.6 73 10-100 16-89 (229)
289 KOG1202|consensus 98.3 6.3E-06 1.4E-10 61.1 8.1 89 4-99 1763-1855(2376)
290 PRK14982 acyl-ACP reductase; P 98.3 1.2E-05 2.6E-10 52.6 8.6 36 6-41 152-189 (340)
291 PRK09620 hypothetical protein; 98.3 2.1E-05 4.5E-10 48.9 9.0 35 7-41 1-51 (229)
292 PF07993 NAD_binding_4: Male s 98.2 4.4E-06 9.5E-11 52.3 5.6 78 14-100 1-95 (249)
293 PF03435 Saccharop_dh: Sacchar 98.2 4.6E-06 1E-10 55.2 5.3 72 12-100 1-75 (386)
294 cd01065 NAD_bind_Shikimate_DH 98.2 3.5E-05 7.7E-10 44.7 8.3 48 6-63 16-64 (155)
295 KOG1430|consensus 98.2 9.3E-06 2E-10 53.4 6.3 35 8-42 3-39 (361)
296 COG1090 Predicted nucleoside-d 98.2 2.8E-06 6E-11 53.8 3.6 32 12-43 1-32 (297)
297 TIGR00507 aroE shikimate 5-deh 98.2 3E-05 6.6E-10 49.2 8.4 48 7-64 115-162 (270)
298 PRK12428 3-alpha-hydroxysteroi 98.1 4E-06 8.6E-11 52.1 4.0 56 25-100 1-56 (241)
299 PRK00258 aroE shikimate 5-dehy 98.1 3.8E-05 8.3E-10 49.0 8.4 48 6-63 120-168 (278)
300 COG0702 Predicted nucleoside-d 98.1 1E-05 2.3E-10 50.6 5.8 32 11-42 2-33 (275)
301 COG1089 Gmd GDP-D-mannose dehy 98.1 5.1E-06 1.1E-10 53.0 4.1 76 9-86 2-77 (345)
302 PLN02260 probable rhamnose bio 98.1 1.8E-05 3.9E-10 55.8 6.8 28 10-37 381-408 (668)
303 PF04127 DFP: DNA / pantothena 98.0 3.3E-05 7.2E-10 46.6 5.9 74 7-100 1-90 (185)
304 PRK12549 shikimate 5-dehydroge 98.0 0.00017 3.8E-09 46.2 9.5 50 6-65 124-174 (284)
305 PRK02472 murD UDP-N-acetylmura 98.0 4.9E-05 1.1E-09 51.2 7.2 35 6-41 2-36 (447)
306 PRK06849 hypothetical protein; 97.9 0.00017 3.7E-09 47.9 9.1 34 8-41 3-36 (389)
307 TIGR03443 alpha_am_amid L-amin 97.9 6.7E-05 1.5E-09 56.6 7.9 33 9-41 971-1007(1389)
308 COG0169 AroE Shikimate 5-dehyd 97.9 0.00016 3.5E-09 46.3 8.4 51 6-66 123-174 (283)
309 PRK14027 quinate/shikimate deh 97.9 0.0003 6.4E-09 45.2 9.5 47 7-63 125-172 (283)
310 TIGR01809 Shik-DH-AROM shikima 97.9 0.00025 5.4E-09 45.4 9.0 48 7-64 123-171 (282)
311 COG3320 Putative dehydrogenase 97.9 0.00011 2.4E-09 48.5 7.4 32 10-41 1-33 (382)
312 cd08295 double_bond_reductase_ 97.8 0.00034 7.4E-09 45.4 8.8 34 8-41 151-184 (338)
313 PLN02520 bifunctional 3-dehydr 97.8 0.00012 2.6E-09 50.6 6.6 47 6-62 376-422 (529)
314 KOG1221|consensus 97.8 0.00018 4E-09 48.9 7.2 37 7-43 10-49 (467)
315 KOG1429|consensus 97.8 7.4E-05 1.6E-09 47.9 4.8 36 6-41 24-59 (350)
316 KOG1198|consensus 97.7 0.00057 1.2E-08 45.1 9.1 75 8-100 157-233 (347)
317 PLN03154 putative allyl alcoho 97.7 0.00058 1.3E-08 44.8 9.0 34 8-41 158-191 (348)
318 cd08293 PTGR2 Prostaglandin re 97.7 0.00063 1.4E-08 44.1 9.0 32 10-41 156-188 (345)
319 TIGR02825 B4_12hDH leukotriene 97.7 0.00066 1.4E-08 43.8 9.0 34 8-41 138-171 (325)
320 cd08259 Zn_ADH5 Alcohol dehydr 97.7 0.0008 1.7E-08 43.2 9.3 34 8-41 162-195 (332)
321 COG4982 3-oxoacyl-[acyl-carrie 97.7 0.00033 7.1E-09 49.2 7.7 80 6-89 393-476 (866)
322 TIGR02356 adenyl_thiF thiazole 97.7 0.001 2.2E-08 40.7 9.2 36 6-42 18-54 (202)
323 PRK09310 aroDE bifunctional 3- 97.7 0.00046 1E-08 47.3 8.0 35 6-41 329-363 (477)
324 PRK13940 glutamyl-tRNA reducta 97.7 0.00041 8.9E-09 46.7 7.6 47 6-62 178-225 (414)
325 cd08266 Zn_ADH_like1 Alcohol d 97.7 0.00097 2.1E-08 42.8 9.2 34 8-41 166-199 (342)
326 cd08253 zeta_crystallin Zeta-c 97.7 0.0011 2.3E-08 42.2 9.3 34 8-41 144-177 (325)
327 COG0604 Qor NADPH:quinone redu 97.7 0.0012 2.6E-08 43.1 9.5 74 9-99 143-218 (326)
328 cd01075 NAD_bind_Leu_Phe_Val_D 97.6 0.00031 6.6E-09 42.9 6.3 36 5-41 24-59 (200)
329 TIGR02853 spore_dpaA dipicolin 97.5 0.0015 3.2E-08 42.1 8.4 36 5-41 147-182 (287)
330 cd05276 p53_inducible_oxidored 97.5 0.0021 4.5E-08 40.8 9.1 34 8-41 139-172 (323)
331 cd05188 MDR Medium chain reduc 97.5 0.0029 6.3E-08 39.3 9.5 33 8-41 134-166 (271)
332 PRK12475 thiamine/molybdopteri 97.5 0.003 6.5E-08 41.6 9.5 36 6-42 21-57 (338)
333 PRK12749 quinate/shikimate deh 97.5 0.0027 5.8E-08 40.9 9.1 52 6-64 121-173 (288)
334 PF00070 Pyr_redox: Pyridine n 97.4 0.0034 7.4E-08 32.5 7.9 55 12-68 2-56 (80)
335 COG3007 Uncharacterized paraqu 97.4 0.0047 1E-07 40.0 9.4 91 8-99 40-138 (398)
336 PRK08762 molybdopterin biosynt 97.4 0.003 6.5E-08 42.1 8.8 36 6-42 132-168 (376)
337 PRK07688 thiamine/molybdopteri 97.3 0.0038 8.2E-08 41.1 8.8 36 6-42 21-57 (339)
338 TIGR02355 moeB molybdopterin s 97.3 0.0055 1.2E-07 38.5 9.1 36 6-42 21-57 (240)
339 PRK13982 bifunctional SbtC-lik 97.3 0.0013 2.8E-08 45.1 6.7 36 6-41 253-304 (475)
340 PRK06719 precorrin-2 dehydroge 97.3 0.0008 1.7E-08 39.6 5.0 34 6-40 10-43 (157)
341 PF03446 NAD_binding_2: NAD bi 97.3 0.0045 9.7E-08 36.5 8.2 79 10-98 2-92 (163)
342 PRK09880 L-idonate 5-dehydroge 97.3 0.0055 1.2E-07 40.0 9.0 33 8-41 169-202 (343)
343 PRK15469 ghrA bifunctional gly 97.3 0.0052 1.1E-07 40.0 8.8 36 6-42 133-168 (312)
344 cd08294 leukotriene_B4_DH_like 97.3 0.0053 1.1E-07 39.5 8.8 34 8-41 143-176 (329)
345 PRK08644 thiamine biosynthesis 97.3 0.007 1.5E-07 37.3 8.9 36 6-42 25-61 (212)
346 PRK05690 molybdopterin biosynt 97.3 0.0073 1.6E-07 38.0 9.1 35 6-41 29-64 (245)
347 cd05288 PGDH Prostaglandin deh 97.3 0.0049 1.1E-07 39.7 8.6 34 8-41 145-178 (329)
348 COG0373 HemA Glutamyl-tRNA red 97.2 0.0035 7.6E-08 42.3 8.0 47 7-63 176-223 (414)
349 PRK13243 glyoxylate reductase; 97.2 0.0013 2.9E-08 43.1 5.9 36 6-42 147-182 (333)
350 PRK14192 bifunctional 5,10-met 97.2 0.0029 6.3E-08 40.7 7.2 37 5-41 155-191 (283)
351 KOG2865|consensus 97.2 0.0011 2.3E-08 42.9 5.1 70 6-84 58-129 (391)
352 COG2910 Putative NADH-flavin r 97.2 0.0014 3.1E-08 39.6 5.4 32 11-42 2-33 (211)
353 cd00757 ThiF_MoeB_HesA_family 97.2 0.0087 1.9E-07 37.2 9.1 35 6-41 18-53 (228)
354 TIGR00518 alaDH alanine dehydr 97.2 0.0042 9.1E-08 41.4 8.0 33 8-41 166-198 (370)
355 cd01336 MDH_cytoplasmic_cytoso 97.2 0.00089 1.9E-08 43.8 4.8 32 11-42 4-42 (325)
356 KOG2733|consensus 97.2 0.0023 4.9E-08 42.4 6.4 73 12-100 8-91 (423)
357 cd01483 E1_enzyme_family Super 97.2 0.011 2.5E-07 33.9 8.7 30 12-42 2-32 (143)
358 TIGR02354 thiF_fam2 thiamine b 97.2 0.013 2.8E-07 35.8 9.3 36 6-42 18-54 (200)
359 PF12242 Eno-Rase_NADH_b: NAD( 97.2 0.00097 2.1E-08 34.4 3.6 31 10-41 40-72 (78)
360 KOG1372|consensus 97.1 0.0007 1.5E-08 42.9 3.5 75 9-87 28-106 (376)
361 cd08268 MDR2 Medium chain dehy 97.1 0.0093 2E-07 38.0 8.8 34 8-41 144-177 (328)
362 cd01080 NAD_bind_m-THF_DH_Cycl 97.1 0.003 6.5E-08 37.6 6.0 37 6-42 41-77 (168)
363 PRK08410 2-hydroxyacid dehydro 97.1 0.011 2.5E-07 38.4 9.1 36 6-42 142-177 (311)
364 PRK06718 precorrin-2 dehydroge 97.1 0.0012 2.6E-08 40.4 4.4 36 5-41 6-41 (202)
365 PF00899 ThiF: ThiF family; I 97.1 0.01 2.2E-07 33.8 7.9 32 9-41 2-34 (135)
366 PRK05597 molybdopterin biosynt 97.1 0.013 2.8E-07 38.9 9.3 36 6-42 25-61 (355)
367 TIGR02824 quinone_pig3 putativ 97.1 0.0072 1.6E-07 38.4 7.9 34 8-41 139-172 (325)
368 cd05211 NAD_bind_Glu_Leu_Phe_V 97.0 0.006 1.3E-07 37.8 7.0 35 6-41 20-55 (217)
369 PRK00045 hemA glutamyl-tRNA re 97.0 0.0054 1.2E-07 41.5 7.3 34 7-41 180-214 (423)
370 PF13241 NAD_binding_7: Putati 97.0 0.00056 1.2E-08 37.4 2.2 36 5-41 3-38 (103)
371 PRK08306 dipicolinate synthase 97.0 0.0086 1.9E-07 38.8 7.8 35 6-41 149-183 (296)
372 PF02826 2-Hacid_dh_C: D-isome 97.0 0.00042 9.1E-09 41.4 1.7 37 5-42 32-68 (178)
373 TIGR00715 precor6x_red precorr 97.0 0.0025 5.5E-08 40.4 5.2 31 11-42 2-32 (256)
374 COG0111 SerA Phosphoglycerate 97.0 0.0091 2E-07 39.2 7.9 35 6-41 139-173 (324)
375 TIGR01035 hemA glutamyl-tRNA r 97.0 0.008 1.7E-07 40.7 7.7 35 6-41 177-212 (417)
376 COG1064 AdhP Zn-dependent alco 97.0 0.021 4.5E-07 37.7 9.3 33 8-41 166-198 (339)
377 cd01485 E1-1_like Ubiquitin ac 96.9 0.014 3.1E-07 35.6 8.1 35 7-42 17-52 (198)
378 COG1648 CysG Siroheme synthase 96.9 0.015 3.2E-07 36.0 8.1 37 4-41 7-43 (210)
379 cd05212 NAD_bind_m-THF_DH_Cycl 96.9 0.0064 1.4E-07 35.2 6.0 37 5-41 24-60 (140)
380 KOG1203|consensus 96.9 0.0077 1.7E-07 40.6 7.1 34 8-41 78-111 (411)
381 COG2227 UbiG 2-polyprenyl-3-me 96.9 0.022 4.8E-07 35.8 8.6 32 7-41 58-89 (243)
382 PRK14194 bifunctional 5,10-met 96.9 0.0046 1E-07 40.1 5.9 37 5-41 155-191 (301)
383 PLN00203 glutamyl-tRNA reducta 96.9 0.013 2.7E-07 40.9 8.3 46 7-62 264-310 (519)
384 cd01492 Aos1_SUMO Ubiquitin ac 96.9 0.016 3.4E-07 35.4 7.9 35 7-42 19-54 (197)
385 PRK14175 bifunctional 5,10-met 96.9 0.0066 1.4E-07 39.1 6.4 37 5-41 154-190 (286)
386 TIGR02818 adh_III_F_hyde S-(hy 96.9 0.027 5.9E-07 37.2 9.5 33 8-41 185-218 (368)
387 PRK05600 thiamine biosynthesis 96.9 0.022 4.8E-07 38.1 9.0 36 6-42 38-74 (370)
388 TIGR01915 npdG NADPH-dependent 96.9 0.0065 1.4E-07 37.5 6.2 31 11-41 2-32 (219)
389 PRK12480 D-lactate dehydrogena 96.9 0.01 2.2E-07 39.0 7.4 36 6-42 143-178 (330)
390 cd08300 alcohol_DH_class_III c 96.9 0.028 6.1E-07 37.1 9.5 33 8-41 186-219 (368)
391 cd08244 MDR_enoyl_red Possible 96.8 0.023 5.1E-07 36.4 8.9 34 8-41 142-175 (324)
392 PF02882 THF_DHG_CYH_C: Tetrah 96.8 0.0041 8.9E-08 36.8 4.9 37 5-41 32-68 (160)
393 PF02254 TrkA_N: TrkA-N domain 96.8 0.0043 9.4E-08 34.2 4.8 29 12-41 1-29 (116)
394 cd05213 NAD_bind_Glutamyl_tRNA 96.8 0.01 2.3E-07 38.6 7.1 34 7-41 176-210 (311)
395 PLN02740 Alcohol dehydrogenase 96.8 0.03 6.5E-07 37.2 9.4 33 8-41 198-231 (381)
396 cd08250 Mgc45594_like Mgc45594 96.8 0.022 4.8E-07 36.7 8.6 34 8-41 139-172 (329)
397 cd08243 quinone_oxidoreductase 96.8 0.029 6.2E-07 35.8 9.0 34 8-41 142-175 (320)
398 COG3268 Uncharacterized conser 96.8 0.01 2.2E-07 39.1 6.7 73 10-100 7-79 (382)
399 cd08239 THR_DH_like L-threonin 96.8 0.026 5.7E-07 36.6 8.8 33 8-41 163-196 (339)
400 COG0569 TrkA K+ transport syst 96.8 0.0063 1.4E-07 37.9 5.6 30 11-41 2-31 (225)
401 cd00755 YgdL_like Family of ac 96.7 0.032 6.9E-07 34.9 8.5 35 6-41 8-43 (231)
402 PF12076 Wax2_C: WAX2 C-termin 96.7 0.0055 1.2E-07 36.1 4.7 42 12-64 1-42 (164)
403 PF10727 Rossmann-like: Rossma 96.7 0.0096 2.1E-07 33.9 5.7 32 9-41 10-41 (127)
404 PRK06436 glycerate dehydrogena 96.7 0.049 1.1E-06 35.5 9.5 36 6-42 119-154 (303)
405 cd05313 NAD_bind_2_Glu_DH NAD( 96.7 0.015 3.3E-07 36.9 7.0 34 5-39 34-67 (254)
406 PTZ00354 alcohol dehydrogenase 96.7 0.029 6.4E-07 36.0 8.6 34 8-41 140-173 (334)
407 PRK08328 hypothetical protein; 96.7 0.011 2.4E-07 36.9 6.4 34 7-41 25-59 (231)
408 cd08290 ETR 2-enoyl thioester 96.7 0.029 6.4E-07 36.3 8.6 34 8-41 146-179 (341)
409 TIGR00561 pntA NAD(P) transhyd 96.7 0.042 9.1E-07 38.3 9.5 33 8-41 163-195 (511)
410 PRK07411 hypothetical protein; 96.7 0.039 8.4E-07 37.2 9.2 35 6-41 35-70 (390)
411 PRK14191 bifunctional 5,10-met 96.7 0.013 2.9E-07 37.8 6.6 37 5-41 153-189 (285)
412 PRK01438 murD UDP-N-acetylmura 96.7 0.02 4.3E-07 39.3 7.9 35 6-41 13-47 (480)
413 PRK07878 molybdopterin biosynt 96.7 0.042 9.2E-07 37.0 9.3 34 7-41 40-74 (392)
414 PRK09424 pntA NAD(P) transhydr 96.7 0.051 1.1E-06 37.9 9.8 33 8-41 164-196 (509)
415 cd08292 ETR_like_2 2-enoyl thi 96.7 0.031 6.6E-07 35.9 8.4 34 8-41 139-172 (324)
416 PRK04148 hypothetical protein; 96.7 0.019 4.1E-07 33.0 6.5 32 8-41 16-47 (134)
417 PF02737 3HCDH_N: 3-hydroxyacy 96.6 0.016 3.5E-07 34.8 6.5 30 11-41 1-30 (180)
418 PRK15438 erythronate-4-phospha 96.6 0.025 5.5E-07 37.9 8.0 36 5-41 112-147 (378)
419 cd08301 alcohol_DH_plants Plan 96.6 0.046 1E-06 36.1 9.2 33 8-41 187-220 (369)
420 TIGR01470 cysG_Nterm siroheme 96.6 0.005 1.1E-07 37.8 4.3 37 4-41 4-40 (205)
421 KOG0069|consensus 96.6 0.015 3.3E-07 38.3 6.7 36 5-41 158-193 (336)
422 TIGR02817 adh_fam_1 zinc-bindi 96.6 0.053 1.2E-06 35.0 9.2 33 9-41 149-182 (336)
423 cd01487 E1_ThiF_like E1_ThiF_l 96.6 0.042 9.2E-07 32.8 8.1 30 12-42 2-32 (174)
424 cd01076 NAD_bind_1_Glu_DH NAD( 96.6 0.01 2.3E-07 37.0 5.6 35 6-41 28-63 (227)
425 PF01210 NAD_Gly3P_dh_N: NAD-d 96.6 0.013 2.8E-07 34.4 5.8 39 12-60 2-40 (157)
426 cd01491 Ube1_repeat1 Ubiquitin 96.6 0.049 1.1E-06 35.2 8.7 36 6-42 16-52 (286)
427 cd08297 CAD3 Cinnamyl alcohol 96.6 0.06 1.3E-06 34.9 9.3 34 8-41 165-198 (341)
428 PF01113 DapB_N: Dihydrodipico 96.6 0.052 1.1E-06 30.6 8.0 79 11-97 2-96 (124)
429 cd08241 QOR1 Quinone oxidoredu 96.5 0.044 9.6E-07 34.8 8.5 34 8-41 139-172 (323)
430 PRK08223 hypothetical protein; 96.5 0.012 2.6E-07 38.0 5.8 35 6-41 24-59 (287)
431 cd08238 sorbose_phosphate_red 96.5 0.051 1.1E-06 36.5 9.0 34 8-41 175-211 (410)
432 PRK14189 bifunctional 5,10-met 96.5 0.013 2.9E-07 37.8 5.9 36 6-41 155-190 (285)
433 PTZ00325 malate dehydrogenase; 96.5 0.027 5.8E-07 37.0 7.4 35 7-41 6-42 (321)
434 PRK14173 bifunctional 5,10-met 96.5 0.015 3.2E-07 37.6 6.0 37 5-41 151-187 (287)
435 PRK07574 formate dehydrogenase 96.5 0.031 6.6E-07 37.6 7.7 37 5-42 188-224 (385)
436 COG2085 Predicted dinucleotide 96.5 0.014 3.1E-07 35.9 5.6 30 13-42 4-33 (211)
437 PRK12550 shikimate 5-dehydroge 96.5 0.015 3.3E-07 37.2 6.0 43 9-61 122-165 (272)
438 PLN02928 oxidoreductase family 96.5 0.018 3.8E-07 38.2 6.5 36 6-42 156-191 (347)
439 cd08291 ETR_like_1 2-enoyl thi 96.5 0.064 1.4E-06 34.7 9.0 32 10-41 145-176 (324)
440 PRK14183 bifunctional 5,10-met 96.5 0.015 3.2E-07 37.5 5.9 37 5-41 153-189 (281)
441 PRK06487 glycerate dehydrogena 96.5 0.033 7.1E-07 36.4 7.6 36 6-42 145-180 (317)
442 PRK14177 bifunctional 5,10-met 96.4 0.016 3.4E-07 37.4 5.9 37 5-41 155-191 (284)
443 cd05286 QOR2 Quinone oxidoredu 96.4 0.035 7.5E-07 35.1 7.6 34 8-41 136-169 (320)
444 PRK14188 bifunctional 5,10-met 96.4 0.014 3E-07 37.9 5.7 35 6-40 155-189 (296)
445 cd05291 HicDH_like L-2-hydroxy 96.4 0.041 8.9E-07 35.7 7.9 31 11-42 2-34 (306)
446 PRK14190 bifunctional 5,10-met 96.4 0.02 4.4E-07 36.9 6.4 37 5-41 154-190 (284)
447 cd08233 butanediol_DH_like (2R 96.4 0.12 2.6E-06 33.8 10.2 33 8-41 172-205 (351)
448 cd08248 RTN4I1 Human Reticulon 96.4 0.061 1.3E-06 35.0 8.8 34 8-41 162-195 (350)
449 PRK15409 bifunctional glyoxyla 96.4 0.017 3.7E-07 37.9 6.1 36 6-42 142-178 (323)
450 PRK14170 bifunctional 5,10-met 96.4 0.017 3.7E-07 37.2 5.9 37 5-41 153-189 (284)
451 PF08643 DUF1776: Fungal famil 96.4 0.028 6.1E-07 36.5 7.0 73 9-90 3-76 (299)
452 PRK07530 3-hydroxybutyryl-CoA 96.4 0.025 5.4E-07 36.4 6.8 31 10-41 5-35 (292)
453 PRK05562 precorrin-2 dehydroge 96.4 0.043 9.3E-07 34.2 7.5 34 6-40 22-55 (223)
454 PF02670 DXP_reductoisom: 1-de 96.4 0.064 1.4E-06 30.7 7.7 46 12-64 1-48 (129)
455 cd05282 ETR_like 2-enoyl thioe 96.4 0.037 8.1E-07 35.4 7.6 34 8-41 138-171 (323)
456 PRK10792 bifunctional 5,10-met 96.4 0.018 3.9E-07 37.2 6.0 37 5-41 155-191 (285)
457 COG2130 Putative NADP-dependen 96.4 0.086 1.9E-06 34.5 8.9 77 8-100 150-227 (340)
458 PLN02819 lysine-ketoglutarate 96.4 0.031 6.8E-07 41.9 7.8 75 8-100 568-656 (1042)
459 PRK14180 bifunctional 5,10-met 96.4 0.018 3.9E-07 37.1 5.9 36 6-41 155-190 (282)
460 cd08296 CAD_like Cinnamyl alco 96.4 0.066 1.4E-06 34.8 8.7 33 8-41 163-195 (333)
461 PRK14186 bifunctional 5,10-met 96.4 0.017 3.8E-07 37.4 5.9 36 6-41 155-190 (297)
462 PLN02477 glutamate dehydrogena 96.4 0.015 3.2E-07 39.4 5.8 35 6-41 203-238 (410)
463 TIGR03201 dearomat_had 6-hydro 96.4 0.14 3E-06 33.6 10.2 33 8-41 166-198 (349)
464 cd08246 crotonyl_coA_red croto 96.4 0.1 2.2E-06 34.8 9.7 34 8-41 193-226 (393)
465 PRK14172 bifunctional 5,10-met 96.4 0.019 4E-07 37.0 5.8 37 5-41 154-190 (278)
466 TIGR01751 crot-CoA-red crotony 96.3 0.12 2.5E-06 34.6 9.9 34 8-41 189-222 (398)
467 PF00107 ADH_zinc_N: Zinc-bind 96.3 0.065 1.4E-06 29.9 7.6 64 20-100 1-66 (130)
468 cd08281 liver_ADH_like1 Zinc-d 96.3 0.065 1.4E-06 35.4 8.6 33 8-41 191-224 (371)
469 PRK14169 bifunctional 5,10-met 96.3 0.021 4.6E-07 36.8 6.0 37 5-41 152-188 (282)
470 PRK00257 erythronate-4-phospha 96.3 0.043 9.2E-07 36.9 7.6 36 5-41 112-147 (381)
471 PRK14179 bifunctional 5,10-met 96.3 0.018 3.9E-07 37.1 5.7 37 5-41 154-190 (284)
472 PLN02178 cinnamyl-alcohol dehy 96.3 0.059 1.3E-06 35.9 8.3 33 8-41 178-210 (375)
473 PF00670 AdoHcyase_NAD: S-aden 96.3 0.03 6.4E-07 33.2 6.1 36 5-41 19-54 (162)
474 PRK14176 bifunctional 5,10-met 96.3 0.022 4.8E-07 36.8 5.9 37 5-41 160-196 (287)
475 PLN02516 methylenetetrahydrofo 96.3 0.022 4.8E-07 37.0 5.9 37 5-41 163-199 (299)
476 PF02558 ApbA: Ketopantoate re 96.3 0.021 4.6E-07 32.9 5.4 29 12-41 1-29 (151)
477 PLN03139 formate dehydrogenase 96.2 0.03 6.4E-07 37.7 6.6 37 5-42 195-231 (386)
478 PRK14171 bifunctional 5,10-met 96.2 0.022 4.8E-07 36.8 5.8 36 6-41 156-191 (288)
479 PLN02586 probable cinnamyl alc 96.2 0.059 1.3E-06 35.6 8.0 33 8-41 183-215 (360)
480 cd08274 MDR9 Medium chain dehy 96.2 0.078 1.7E-06 34.4 8.5 34 8-41 177-210 (350)
481 PRK14187 bifunctional 5,10-met 96.2 0.024 5.2E-07 36.7 5.9 37 5-41 156-192 (294)
482 PRK11790 D-3-phosphoglycerate 96.2 0.11 2.4E-06 35.3 9.3 37 5-42 147-183 (409)
483 PRK08655 prephenate dehydrogen 96.2 0.021 4.6E-07 38.9 5.9 32 11-42 2-33 (437)
484 PLN02827 Alcohol dehydrogenase 96.2 0.11 2.5E-06 34.5 9.2 33 8-41 193-226 (378)
485 cd01079 NAD_bind_m-THF_DH NAD 96.2 0.018 4E-07 35.1 5.0 35 6-40 59-93 (197)
486 PRK14166 bifunctional 5,10-met 96.2 0.027 5.9E-07 36.3 6.0 36 6-41 154-189 (282)
487 cd08299 alcohol_DH_class_I_II_ 96.2 0.092 2E-06 34.9 8.7 33 8-41 190-223 (373)
488 KOG4039|consensus 96.2 0.033 7.2E-07 33.8 5.9 38 5-42 14-53 (238)
489 PRK09496 trkA potassium transp 96.2 0.027 5.8E-07 38.2 6.3 34 7-41 229-262 (453)
490 cd08260 Zn_ADH6 Alcohol dehydr 96.2 0.13 2.8E-06 33.5 9.2 33 8-41 165-197 (345)
491 TIGR03451 mycoS_dep_FDH mycoth 96.2 0.096 2.1E-06 34.5 8.7 33 8-41 176-209 (358)
492 cd08277 liver_alcohol_DH_like 96.2 0.14 3.1E-06 33.8 9.5 33 8-41 184-217 (365)
493 cd00401 AdoHcyase S-adenosyl-L 96.2 0.026 5.7E-07 38.3 6.1 35 6-41 199-233 (413)
494 PRK06932 glycerate dehydrogena 96.2 0.036 7.9E-07 36.2 6.6 35 6-41 144-178 (314)
495 PLN00106 malate dehydrogenase 96.2 0.031 6.6E-07 36.7 6.2 34 9-42 18-53 (323)
496 PRK14851 hypothetical protein; 96.1 0.12 2.5E-06 37.4 9.4 35 6-41 40-75 (679)
497 PRK14182 bifunctional 5,10-met 96.1 0.033 7.1E-07 35.9 6.0 37 5-41 153-189 (282)
498 PRK06153 hypothetical protein; 96.1 0.17 3.7E-06 34.2 9.4 35 6-41 173-208 (393)
499 COG1052 LdhA Lactate dehydroge 96.1 0.056 1.2E-06 35.6 7.1 37 5-42 142-178 (324)
500 PF03807 F420_oxidored: NADP o 96.1 0.05 1.1E-06 28.9 5.9 41 12-62 2-46 (96)
No 1
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.87 E-value=2e-21 Score=121.04 Aligned_cols=86 Identities=26% Similarity=0.411 Sum_probs=78.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC----CceeeeccCcccHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG----GKAVPDYNSVVDGDK 81 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~~~~~~~ 81 (100)
.+++++++|||||+|||.++++.|+++|++|+++.| ++++++++++++.... ....+|+++++++.+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR---------~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~ 73 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVAR---------REDKLEALAKELEDKTGVEVEVIPADLSDPEALER 73 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------cHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHH
Confidence 356899999999999999999999999999999987 8899999999988765 456789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+.+++.+...+||+|||||
T Consensus 74 l~~~l~~~~~~IdvLVNNA 92 (265)
T COG0300 74 LEDELKERGGPIDVLVNNA 92 (265)
T ss_pred HHHHHHhcCCcccEEEECC
Confidence 9999999888999999998
No 2
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.87 E-value=2.1e-21 Score=118.77 Aligned_cols=86 Identities=34% Similarity=0.512 Sum_probs=78.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-cCCceeeeccCcccHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~ 84 (100)
.+++|+++||||++|||.++++.|++.|++|++..| ..++++++..++.+ .......|++|.++++++++
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aR---------R~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~ 73 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAAR---------REERLEALADEIGAGAALALALDVTDRAAVEAAIE 73 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec---------cHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHH
Confidence 356799999999999999999999999999999977 78889999988874 44556779999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
.+.++++++|+|||||
T Consensus 74 ~~~~~~g~iDiLvNNA 89 (246)
T COG4221 74 ALPEEFGRIDILVNNA 89 (246)
T ss_pred HHHHhhCcccEEEecC
Confidence 9999999999999998
No 3
>KOG1205|consensus
Probab=99.84 E-value=7e-21 Score=119.48 Aligned_cols=88 Identities=33% Similarity=0.513 Sum_probs=72.9
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH----hc-CCceeeeccCccc
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR----SK-GGKAVPDYNSVVD 78 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~d~~~~~~ 78 (100)
+.++.+|+++||||++|||.++|++|+++|++++++.| ...+++.+.+++. .. ....++|++|.++
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar---------~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~ 77 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVAR---------RARRLERVAEELRKLGSLEKVLVLQLDVSDEES 77 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeeh---------hhhhHHHHHHHHHHhCCcCccEEEeCccCCHHH
Confidence 34678999999999999999999999999999888876 3344444434443 23 4556789999999
Q ss_pred HHHHHHHHHHHcCCccEEEecC
Q psy9143 79 GDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 79 ~~~~~~~~~~~~~~id~li~~A 100 (100)
+.++++++..++|++|+|||||
T Consensus 78 ~~~~~~~~~~~fg~vDvLVNNA 99 (282)
T KOG1205|consen 78 VKKFVEWAIRHFGRVDVLVNNA 99 (282)
T ss_pred HHHHHHHHHHhcCCCCEEEecC
Confidence 9999999999999999999998
No 4
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=4.3e-19 Score=106.33 Aligned_cols=85 Identities=21% Similarity=0.308 Sum_probs=74.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.++|.+++||||++|||++++++|.+.|-.|+++.| +++++.+..++.+. .....||+.|.+++..+++.
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR---------~e~~L~e~~~~~p~-~~t~v~Dv~d~~~~~~lvew 71 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGR---------NEERLAEAKAENPE-IHTEVCDVADRDSRRELVEW 71 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC---------cHHHHHHHHhcCcc-hheeeecccchhhHHHHHHH
Confidence 468999999999999999999999999999999976 77777777655443 34567999999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++.++++||||
T Consensus 72 Lkk~~P~lNvliNNA 86 (245)
T COG3967 72 LKKEYPNLNVLINNA 86 (245)
T ss_pred HHhhCCchheeeecc
Confidence 999999999999997
No 5
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.79 E-value=1.5e-18 Score=108.44 Aligned_cols=93 Identities=16% Similarity=0.256 Sum_probs=73.4
Q ss_pred CCCCCCCCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCccc
Q psy9143 1 MPEQVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVD 78 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 78 (100)
|...+++++|+++|||++ +|||++++++|++.|++|++++|+.+ ..+.++++.+++.. ...+.+|+++.++
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~------~~~~~~~~~~~~~~-~~~~~~D~~~~~~ 74 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK------ARPYVEPLAEELDA-PIFLPLDVREPGQ 74 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh------hHHHHHHHHHhhcc-ceEEecCcCCHHH
Confidence 455677899999999998 49999999999999999999887311 12233444333322 3456789999999
Q ss_pred HHHHHHHHHHHcCCccEEEecC
Q psy9143 79 GDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 79 ~~~~~~~~~~~~~~id~li~~A 100 (100)
++++++++.++++++|++||||
T Consensus 75 v~~~~~~~~~~~g~ld~lv~nA 96 (258)
T PRK07533 75 LEAVFARIAEEWGRLDFLLHSI 96 (258)
T ss_pred HHHHHHHHHHHcCCCCEEEEcC
Confidence 9999999999999999999997
No 6
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.9e-18 Score=110.71 Aligned_cols=87 Identities=31% Similarity=0.361 Sum_probs=72.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDG 79 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~ 79 (100)
.++++++++||||++|||++++++|+++|++|++++| +.+..++..+++.. ....+.+|+++.+++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R---------~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv 80 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVR---------NRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASV 80 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHH
Confidence 4578999999999999999999999999999999987 44455555544433 234567899999999
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
.++++++.+.++++|+|||||
T Consensus 81 ~~~~~~~~~~~~~iD~li~nA 101 (313)
T PRK05854 81 AALGEQLRAEGRPIHLLINNA 101 (313)
T ss_pred HHHHHHHHHhCCCccEEEECC
Confidence 999999999999999999997
No 7
>KOG1201|consensus
Probab=99.78 E-value=2e-18 Score=108.30 Aligned_cols=86 Identities=31% Similarity=0.536 Sum_probs=72.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~ 83 (100)
+..|++++||||++|+|++++.+|+++|+++++.|.+. +..++..+++.. ..+.+.||+++.+++.+..
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~---------~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a 105 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINK---------QGNEETVKEIRKIGEAKAYTCDISDREEIYRLA 105 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccc---------cchHHHHHHHHhcCceeEEEecCCCHHHHHHHH
Confidence 46899999999999999999999999999999998743 333333334332 3566889999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.++.|++++|||||
T Consensus 106 ~~Vk~e~G~V~ILVNNA 122 (300)
T KOG1201|consen 106 KKVKKEVGDVDILVNNA 122 (300)
T ss_pred HHHHHhcCCceEEEecc
Confidence 99999999999999998
No 8
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.4e-18 Score=108.22 Aligned_cols=90 Identities=32% Similarity=0.510 Sum_probs=75.0
Q ss_pred CCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC--CceeeeccCcccH
Q psy9143 2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPDYNSVVDG 79 (100)
Q Consensus 2 ~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~ 79 (100)
+.+.++++++++|||+++|||.++++.|+++|++|++++| +.+.++.+.+++.... ..+.+|++|.+++
T Consensus 2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v 72 (296)
T PRK05872 2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDL---------EEAELAALAAELGGDDRVLTVVADVTDLAAM 72 (296)
T ss_pred CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcCCCcEEEEEecCCCHHHH
Confidence 4556788999999999999999999999999999999977 5556666665554322 2345899999999
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
.++++++.+.++++|++||||
T Consensus 73 ~~~~~~~~~~~g~id~vI~nA 93 (296)
T PRK05872 73 QAAAEEAVERFGGIDVVVANA 93 (296)
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 999999999999999999997
No 9
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.78 E-value=2.9e-18 Score=107.24 Aligned_cols=86 Identities=30% Similarity=0.461 Sum_probs=72.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++++++|||+++|||.+++++|+++|++|++++| +.+..+++.+++......+.+|+++.+++.+++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDI---------DADNGAAVAASLGERARFIATDITDDAAIERAVAT 73 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHH
Confidence 467899999999999999999999999999999987 44445555545444445678899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~g~id~lv~~a 88 (261)
T PRK08265 74 VVARFGRVDILVNLA 88 (261)
T ss_pred HHHHhCCCCEEEECC
Confidence 999999999999997
No 10
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.4e-18 Score=105.87 Aligned_cols=87 Identities=41% Similarity=0.613 Sum_probs=72.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~ 81 (100)
+++++|+++|||+++|||.+++++|++.|++|++++| +.+..+.+.+++... ...+.+|+++.+++++
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR---------RQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKA 72 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 3467899999999999999999999999999999987 445555555555433 3345689999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.++++++|++||||
T Consensus 73 ~~~~~~~~~~~id~li~~a 91 (254)
T PRK07478 73 LVALAVERFGGLDIAFNNA 91 (254)
T ss_pred HHHHHHHhcCCCCEEEECC
Confidence 9999999999999999997
No 11
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.78 E-value=2.9e-18 Score=106.79 Aligned_cols=89 Identities=36% Similarity=0.481 Sum_probs=69.7
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHH
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 83 (100)
++++.+|+++|||+++|||++++++|+++|++|++++++ ..+......+....+...+.+|+++.+++.+++
T Consensus 3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 74 (251)
T PRK12481 3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA--------EAPETQAQVEALGRKFHFITADLIQQKDIDSIV 74 (251)
T ss_pred CcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc--------hHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHH
Confidence 356789999999999999999999999999999988652 112222222222223345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 75 ~~~~~~~g~iD~lv~~a 91 (251)
T PRK12481 75 SQAVEVMGHIDILINNA 91 (251)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99999999999999997
No 12
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.78 E-value=3.9e-18 Score=106.59 Aligned_cols=86 Identities=27% Similarity=0.452 Sum_probs=73.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.+++|+++|||+++|||.+++++|+++|++|++++| +.+..+.+..++......+.+|+++.+++++++++
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLER---------SAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQ 73 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHH
Confidence 467899999999999999999999999999999987 44555555555444455677899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~g~id~li~~a 88 (263)
T PRK06200 74 TVDAFGKLDCFVGNA 88 (263)
T ss_pred HHHhcCCCCEEEECC
Confidence 999999999999997
No 13
>KOG0725|consensus
Probab=99.77 E-value=8.9e-18 Score=105.81 Aligned_cols=88 Identities=42% Similarity=0.642 Sum_probs=73.8
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC------CceeeeccCcc
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG------GKAVPDYNSVV 77 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~~~~ 77 (100)
+.++.+|+++|||+++|||+++|++|++.|++|++++| +.+..+.....+.... ....+|+++.+
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 73 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGR---------SEERLEETAQELGGLGYTGGKVLAIVCDVSKEV 73 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH
Confidence 45688999999999999999999999999999999987 5566556555554322 34567999999
Q ss_pred cHHHHHHHHHHH-cCCccEEEecC
Q psy9143 78 DGDKIVQTALEN-FGRIDIVINNA 100 (100)
Q Consensus 78 ~~~~~~~~~~~~-~~~id~li~~A 100 (100)
++++++++..++ +|++|+|||||
T Consensus 74 ~~~~l~~~~~~~~~GkidiLvnna 97 (270)
T KOG0725|consen 74 DVEKLVEFAVEKFFGKIDILVNNA 97 (270)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcC
Confidence 999999998888 79999999997
No 14
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.77 E-value=7e-18 Score=104.96 Aligned_cols=91 Identities=29% Similarity=0.479 Sum_probs=75.8
Q ss_pred CCCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcc
Q psy9143 1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVV 77 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~ 77 (100)
|.+.+++.+|+++|||+++|||.+++++|+++|++|++++| +....++..+++... ...+.+|+++.+
T Consensus 1 ~~~~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~ 71 (254)
T PRK08085 1 MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDI---------TAERAELAVAKLRQEGIKAHAAPFNVTHKQ 71 (254)
T ss_pred CcccccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC---------CHHHHHHHHHHHHhcCCeEEEEecCCCCHH
Confidence 56667788999999999999999999999999999999877 445555555555432 234567999999
Q ss_pred cHHHHHHHHHHHcCCccEEEecC
Q psy9143 78 DGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 78 ~~~~~~~~~~~~~~~id~li~~A 100 (100)
++.++++++.+.++++|++||||
T Consensus 72 ~~~~~~~~~~~~~~~id~vi~~a 94 (254)
T PRK08085 72 EVEAAIEHIEKDIGPIDVLINNA 94 (254)
T ss_pred HHHHHHHHHHHhcCCCCEEEECC
Confidence 99999999999999999999996
No 15
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=4.6e-18 Score=106.32 Aligned_cols=90 Identities=19% Similarity=0.200 Sum_probs=72.3
Q ss_pred CCCCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH-hcCCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~ 81 (100)
+++++|+++|||++ +|||.+++++|++.|++|++++|+. +..+.++++.+++. .....+.+|++|.+++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 76 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE------RLEKEVRELADTLEGQESLLLPCDVTSDEEITA 76 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc------cchHHHHHHHHHcCCCceEEEecCCCCHHHHHH
Confidence 45679999999997 8999999999999999999987631 13344555554442 223456789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.++++++|++||||
T Consensus 77 ~~~~~~~~~g~ld~lv~na 95 (257)
T PRK08594 77 CFETIKEEVGVIHGVAHCI 95 (257)
T ss_pred HHHHHHHhCCCccEEEECc
Confidence 9999999999999999997
No 16
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.77 E-value=6.9e-18 Score=104.98 Aligned_cols=88 Identities=26% Similarity=0.383 Sum_probs=73.4
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHH
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGD 80 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 80 (100)
.+++++|+++|||+++|||.+++++|+++|++|++++| +.+..+.+.+++... ...+.+|+++.+++.
T Consensus 4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 74 (253)
T PRK05867 4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAAR---------HLDALEKLADEIGTSGGKVVPVCCDVSQHQQVT 74 (253)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence 45678999999999999999999999999999999877 445555555555432 234568999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.+.++++|+|||||
T Consensus 75 ~~~~~~~~~~g~id~lv~~a 94 (253)
T PRK05867 75 SMLDQVTAELGGIDIAVCNA 94 (253)
T ss_pred HHHHHHHHHhCCCCEEEECC
Confidence 99999999999999999997
No 17
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.77 E-value=4.9e-18 Score=106.16 Aligned_cols=86 Identities=33% Similarity=0.425 Sum_probs=70.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.+++|+++|||+++|||.+++++|+++|++|++++| +.+.++++..........+.+|+++.+++.+++++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 72 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDK---------SAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVAR 72 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHH
Confidence 367899999999999999999999999999999876 44444444333222334567899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.++++++|++||||
T Consensus 73 ~~~~~g~id~li~~A 87 (262)
T TIGR03325 73 CVAAFGKIDCLIPNA 87 (262)
T ss_pred HHHHhCCCCEEEECC
Confidence 999999999999997
No 18
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=5.8e-18 Score=105.76 Aligned_cols=87 Identities=17% Similarity=0.292 Sum_probs=71.5
Q ss_pred CCCCEEEEecC--CCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 7 FDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 7 ~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+.+|+++|||+ ++|||++++++|+++|++|++++|+ +..+..+++.+++......+.+|+++.++++++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~ 77 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFG-------RALRLTERIAKRLPEPAPVLELDVTNEEHLASLAD 77 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCc-------cchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHH
Confidence 57899999999 8999999999999999999998762 12233444444444445567899999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.++++++|++||||
T Consensus 78 ~~~~~~g~iD~li~nA 93 (256)
T PRK07889 78 RVREHVDGLDGVVHSI 93 (256)
T ss_pred HHHHHcCCCcEEEEcc
Confidence 9999999999999997
No 19
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.77 E-value=6.2e-18 Score=104.18 Aligned_cols=86 Identities=19% Similarity=0.217 Sum_probs=71.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
++++++++|||+++|||.+++++|+++|++|++++| +.+.+++..+++... ...+.+|+++.++++++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r---------~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~ 72 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQ---------DQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHL 72 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHH
Confidence 467899999999999999999999999999999877 455555555544332 23456799999999999
Q ss_pred HHHHHHHcC-CccEEEecC
Q psy9143 83 VQTALENFG-RIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~-~id~li~~A 100 (100)
++++.++++ ++|++||||
T Consensus 73 ~~~~~~~~g~~iD~li~na 91 (227)
T PRK08862 73 FDAIEQQFNRAPDVLVNNW 91 (227)
T ss_pred HHHHHHHhCCCCCEEEECC
Confidence 999999998 999999997
No 20
>PRK05717 oxidoreductase; Validated
Probab=99.77 E-value=6.8e-18 Score=105.12 Aligned_cols=89 Identities=30% Similarity=0.397 Sum_probs=72.4
Q ss_pred CCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHH
Q psy9143 3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 3 ~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 82 (100)
..+++++|+++|||++++||.+++++|+++|++|+++++ .....+....++......+.+|+++.+++.++
T Consensus 4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (255)
T PRK05717 4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL---------DRERGSKVAKALGENAWFIAMDVADEAQVAAG 74 (255)
T ss_pred CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC---------CHHHHHHHHHHcCCceEEEEccCCCHHHHHHH
Confidence 445678999999999999999999999999999999876 33333333333333345668899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 75 ~~~~~~~~g~id~li~~a 92 (255)
T PRK05717 75 VAEVLGQFGRLDALVCNA 92 (255)
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 999999999999999997
No 21
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.77 E-value=7.5e-18 Score=106.26 Aligned_cols=86 Identities=29% Similarity=0.498 Sum_probs=72.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~ 82 (100)
.+++|+++|||+++|||.+++++|+++|++|+++++ +...+++..+++.... ..+.+|+++.+++.++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r---------~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~ 73 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDV---------DKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHL 73 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 467899999999999999999999999999999876 4445555555554432 3457899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|+|||||
T Consensus 74 ~~~~~~~~g~id~li~nA 91 (275)
T PRK05876 74 ADEAFRLLGHVDVVFSNA 91 (275)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999999999999997
No 22
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.76 E-value=5e-18 Score=107.12 Aligned_cols=87 Identities=16% Similarity=0.277 Sum_probs=69.2
Q ss_pred CCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 7 FDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 7 ~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
|.+|+++|||++ +|||++++++|++.|++|++++|+. +..+.++++.+++... ..+.+|++|.++++++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~------~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~ 75 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE------ALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAE 75 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH------HHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHH
Confidence 578999999997 7999999999999999999987731 0123333333333222 456789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.++++++|+|||||
T Consensus 76 ~i~~~~g~iDilVnnA 91 (274)
T PRK08415 76 SLKKDLGKIDFIVHSV 91 (274)
T ss_pred HHHHHcCCCCEEEECC
Confidence 9999999999999997
No 23
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.76 E-value=9.8e-18 Score=107.20 Aligned_cols=96 Identities=24% Similarity=0.314 Sum_probs=72.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCC-CCChHHHHHHHHHHHhc---CCceeeeccCcccHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGD-GKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGD 80 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 80 (100)
.++++|+++|||+++|||+++++.|++.|++|++++|+...... ....+..+.+.+.+... ...+.+|+++.++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 83 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR 83 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 45789999999999999999999999999999999874321100 00122344444444332 234678999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.++++++|++||||
T Consensus 84 ~~~~~~~~~~g~iDilVnnA 103 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDI 103 (305)
T ss_pred HHHHHHHHHcCCccEEEECC
Confidence 99999999999999999997
No 24
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.76 E-value=1.1e-17 Score=104.54 Aligned_cols=88 Identities=17% Similarity=0.345 Sum_probs=71.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----cCCceeeeccCcccHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPDYNSVVDGD 80 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~ 80 (100)
..+++|+++|||+++|||.++++.|++.|++|++++++ ..+.++...+++.. ....+.+|++++++++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 75 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS--------NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYK 75 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 45789999999999999999999999999999887642 34444444444432 2345678999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.+.++++|++||||
T Consensus 76 ~~~~~~~~~~g~id~lv~nA 95 (260)
T PRK08416 76 ELFKKIDEDFDRVDFFISNA 95 (260)
T ss_pred HHHHHHHHhcCCccEEEECc
Confidence 99999999999999999997
No 25
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1.3e-17 Score=103.88 Aligned_cols=91 Identities=31% Similarity=0.472 Sum_probs=73.5
Q ss_pred CCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCccc
Q psy9143 2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVD 78 (100)
Q Consensus 2 ~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~ 78 (100)
++++++++|+++|||+++|||.+++++|++.|++|++++++. ...++.+.+.+.. +...+.+|++++++
T Consensus 1 ~~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~ 72 (254)
T PRK06114 1 PQLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRT--------DDGLAETAEHIEAAGRRAIQIAADVTSKAD 72 (254)
T ss_pred CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCc--------chHHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 356778999999999999999999999999999999998731 2233344444433 23456789999999
Q ss_pred HHHHHHHHHHHcCCccEEEecC
Q psy9143 79 GDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 79 ~~~~~~~~~~~~~~id~li~~A 100 (100)
+.++++++.+.++++|++||||
T Consensus 73 i~~~~~~~~~~~g~id~li~~a 94 (254)
T PRK06114 73 LRAAVARTEAELGALTLAVNAA 94 (254)
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 9999999999999999999997
No 26
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.76 E-value=6.9e-18 Score=105.17 Aligned_cols=84 Identities=17% Similarity=0.238 Sum_probs=67.9
Q ss_pred CCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH-hcCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~ 83 (100)
+++|+++|||++ +|||.+++++|++.|++|++++|+ . ...+..+++. .....+.+|+++.+++++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~---------~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~ 74 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN---------D-RMKKSLQKLVDEEDLLVECDVASDESIERAF 74 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc---------h-HHHHHHHhhccCceeEEeCCCCCHHHHHHHH
Confidence 578999999999 799999999999999999998762 1 1222222222 23345778999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.++++++|+|||||
T Consensus 75 ~~~~~~~g~iD~lv~nA 91 (252)
T PRK06079 75 ATIKERVGKIDGIVHAI 91 (252)
T ss_pred HHHHHHhCCCCEEEEcc
Confidence 99999999999999997
No 27
>PRK08589 short chain dehydrogenase; Validated
Probab=99.76 E-value=1.7e-17 Score=104.32 Aligned_cols=85 Identities=34% Similarity=0.564 Sum_probs=71.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
.+++|+++|||+++|||.+++++|+++|++|++++| + +..+....++.. +...+.+|+++.+++.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r---------~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 72 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDI---------A-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDF 72 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------c-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHH
Confidence 467899999999999999999999999999999976 3 344444444433 234567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|+|||||
T Consensus 73 ~~~~~~~~g~id~li~~A 90 (272)
T PRK08589 73 ASEIKEQFGRVDVLFNNA 90 (272)
T ss_pred HHHHHHHcCCcCEEEECC
Confidence 999999999999999997
No 28
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1.5e-17 Score=103.78 Aligned_cols=86 Identities=35% Similarity=0.515 Sum_probs=72.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDGD 80 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~ 80 (100)
++++|+++|||+++|||.+++++|+++|++|++++| +.+..++..+++.. ....+.+|+++.+++.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADL---------DAALAERAAAAIARDVAGARVLAVPADVTDAASVA 74 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHH
Confidence 367899999999999999999999999999999987 44555555555543 2234678999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
.+++++.++++++|++||||
T Consensus 75 ~~~~~~~~~~g~id~li~~a 94 (260)
T PRK07063 75 AAVAAAEEAFGPLDVLVNNA 94 (260)
T ss_pred HHHHHHHHHhCCCcEEEECC
Confidence 99999999999999999997
No 29
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1.5e-17 Score=104.02 Aligned_cols=87 Identities=32% Similarity=0.446 Sum_probs=71.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc-----CCceeeeccCcccH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GGKAVPDYNSVVDG 79 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~ 79 (100)
.++++|+++|||+++|||.+++++|+++|++|++++| +.+.+++..+++... ...+.+|+++.+++
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 74 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGR---------DEERLASAEARLREKFPGARLLAARCDVLDEADV 74 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHH
Confidence 4578999999999999999999999999999999987 444444444444332 23457799999999
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
.++++++.+.++++|++||||
T Consensus 75 ~~~~~~~~~~~g~id~li~~A 95 (265)
T PRK07062 75 AAFAAAVEARFGGVDMLVNNA 95 (265)
T ss_pred HHHHHHHHHhcCCCCEEEECC
Confidence 999999999999999999997
No 30
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.75 E-value=1.6e-17 Score=104.61 Aligned_cols=91 Identities=37% Similarity=0.511 Sum_probs=75.1
Q ss_pred CCCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcc
Q psy9143 1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVV 77 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~ 77 (100)
|+..+++.+++++|||+++|||.+++++|+++|++|++++| +.+..+.+.+++... ...+.+|+++.+
T Consensus 2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 72 (278)
T PRK08277 2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDR---------NQEKAEAVVAEIKAAGGEALAVKADVLDKE 72 (278)
T ss_pred CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 45566788999999999999999999999999999999987 444455555555432 234678999999
Q ss_pred cHHHHHHHHHHHcCCccEEEecC
Q psy9143 78 DGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 78 ~~~~~~~~~~~~~~~id~li~~A 100 (100)
++..+++++.++++++|++||||
T Consensus 73 ~v~~~~~~~~~~~g~id~li~~a 95 (278)
T PRK08277 73 SLEQARQQILEDFGPCDILINGA 95 (278)
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 99999999999999999999996
No 31
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.5e-17 Score=104.20 Aligned_cols=86 Identities=24% Similarity=0.353 Sum_probs=70.4
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----cCCceeeeccCcccHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPDYNSVVDGD 80 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~ 80 (100)
+++++|+++|||+++|||.+++++|+++|++|++++| +...++...+++.. ....+.+|++++++++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~ 74 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSR---------NEENLKKAREKIKSESNVDVSYIVADLTKREDLE 74 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHH
Confidence 4578999999999999999999999999999999987 44555555555432 2335678999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++. +++++|++||||
T Consensus 75 ~~~~~~~-~~g~iD~lv~na 93 (263)
T PRK08339 75 RTVKELK-NIGEPDIFFFST 93 (263)
T ss_pred HHHHHHH-hhCCCcEEEECC
Confidence 9999885 589999999997
No 32
>PRK06196 oxidoreductase; Provisional
Probab=99.75 E-value=1.8e-17 Score=106.15 Aligned_cols=86 Identities=33% Similarity=0.381 Sum_probs=71.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
..+++++++|||+++|||.+++++|+++|++|++++| +.+..++...++. ....+.+|++|.+++.++++
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R---------~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~~~ 91 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPAR---------RPDVAREALAGID-GVEVVMLDLADLESVRAFAE 91 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhh-hCeEEEccCCCHHHHHHHHH
Confidence 3567899999999999999999999999999999887 4444444444443 24567889999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.+.++++|+|||||
T Consensus 92 ~~~~~~~~iD~li~nA 107 (315)
T PRK06196 92 RFLDSGRRIDILINNA 107 (315)
T ss_pred HHHhcCCCCCEEEECC
Confidence 9988889999999997
No 33
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.8e-17 Score=105.73 Aligned_cols=87 Identities=33% Similarity=0.396 Sum_probs=70.7
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDG 79 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~ 79 (100)
.++++++++||||++|||.+++++|+++|++|++++| +.+..+...+++.. ....+.+|+++.+++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v 82 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVR---------NLDKGKAAAARITAATPGADVTLQELDLTSLASV 82 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHH
Confidence 4568899999999999999999999999999999877 33444443333332 223557899999999
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
.++++++.+.++++|+|||||
T Consensus 83 ~~~~~~~~~~~~~iD~li~nA 103 (306)
T PRK06197 83 RAAADALRAAYPRIDLLINNA 103 (306)
T ss_pred HHHHHHHHhhCCCCCEEEECC
Confidence 999999999999999999997
No 34
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.75 E-value=3e-17 Score=106.02 Aligned_cols=86 Identities=30% Similarity=0.419 Sum_probs=73.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~ 82 (100)
++.+++++|||+++|||.+++++|+++|++|++++| +.+.++++.+++...+ ..+.+|++|.++++++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R---------~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~ 74 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAAR---------DEEALQAVAEECRALGAEVLVVPTDVTDADQVKAL 74 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Confidence 467899999999999999999999999999999987 5566666666655433 3456799999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 75 ~~~~~~~~g~iD~lVnnA 92 (330)
T PRK06139 75 ATQAASFGGRIDVWVNNV 92 (330)
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 999988889999999997
No 35
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.75 E-value=1.9e-17 Score=103.20 Aligned_cols=86 Identities=37% Similarity=0.522 Sum_probs=72.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++.+++++|||++++||.++++.|+++|++|+++++ +....+.+.+.+......+.+|+++.+++.+++++
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADI---------KPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAA 73 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC---------CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence 467899999999999999999999999999999977 44445555444444445667899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~id~li~~a 88 (257)
T PRK07067 74 AVERFGGIDILFNNA 88 (257)
T ss_pred HHHHcCCCCEEEECC
Confidence 999999999999986
No 36
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.75 E-value=3.3e-17 Score=102.68 Aligned_cols=91 Identities=25% Similarity=0.416 Sum_probs=73.4
Q ss_pred CCCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcc
Q psy9143 1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVV 77 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~ 77 (100)
|..++++++++++|||+++|||.+++++|+++|++|++++| ..+..+....++... ...+.+|+++.+
T Consensus 1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 71 (264)
T PRK07576 1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASR---------SQEKVDAAVAQLQQAGPEGLGVSADVRDYA 71 (264)
T ss_pred CCccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCceEEEECCCCCHH
Confidence 34456788999999999999999999999999999999987 334444444444332 234578999999
Q ss_pred cHHHHHHHHHHHcCCccEEEecC
Q psy9143 78 DGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 78 ~~~~~~~~~~~~~~~id~li~~A 100 (100)
++.++++++.+.++++|++||||
T Consensus 72 ~i~~~~~~~~~~~~~iD~vi~~a 94 (264)
T PRK07576 72 AVEAAFAQIADEFGPIDVLVSGA 94 (264)
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 99999999998899999999986
No 37
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=2.7e-17 Score=103.57 Aligned_cols=87 Identities=16% Similarity=0.299 Sum_probs=67.5
Q ss_pred CCCCEEEEecCCC--chhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 7 FDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 7 ~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
|++|+++|||+++ |||++++++|++.|++|++++|+.. .....+++.++.. ....+.+|++|.++++++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~------~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~ 77 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA------LGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFE 77 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH------HHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHH
Confidence 5789999999996 9999999999999999999876210 1122222222211 12346789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.++++++|+|||||
T Consensus 78 ~~~~~~g~iD~lVnnA 93 (271)
T PRK06505 78 ALEKKWGKLDFVVHAI 93 (271)
T ss_pred HHHHHhCCCCEEEECC
Confidence 9999999999999997
No 38
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.74 E-value=3.1e-17 Score=102.10 Aligned_cols=88 Identities=26% Similarity=0.364 Sum_probs=72.9
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHH
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGD 80 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 80 (100)
++++.+|+++|||++++||.+++++|+++|++|++++| +....+.+.+.+... ...+.+|+++.+++.
T Consensus 5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~ 75 (255)
T PRK07523 5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGR---------DPAKLAAAAESLKGQGLSAHALAFDVTDHDAVR 75 (255)
T ss_pred ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCceEEEEEccCCCHHHHH
Confidence 44578999999999999999999999999999999877 444445555555443 344567999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.+.++++|++||||
T Consensus 76 ~~~~~~~~~~~~~d~li~~a 95 (255)
T PRK07523 76 AAIDAFEAEIGPIDILVNNA 95 (255)
T ss_pred HHHHHHHHhcCCCCEEEECC
Confidence 99999999999999999996
No 39
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3e-17 Score=104.04 Aligned_cols=95 Identities=45% Similarity=0.668 Sum_probs=72.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~ 82 (100)
.+++|+++|||+++|||.+++++|++.|++|++++++.......+....++...+++.... ..+.+|+++.+++.++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 3678999999999999999999999999999998764211000112244555555554322 3456799999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 83 ~~~~~~~~g~id~lv~nA 100 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNA 100 (286)
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 999999999999999997
No 40
>KOG1208|consensus
Probab=99.74 E-value=2.6e-17 Score=105.36 Aligned_cols=87 Identities=32% Similarity=0.404 Sum_probs=73.1
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDG 79 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~ 79 (100)
..+.+++++|||+++|||+++++.|+.+|++|++.+| +.+..++....+.. ......+|+++..++
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R---------~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV 101 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACR---------NEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSV 101 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHH
Confidence 4567899999999999999999999999999999988 44455555555543 123367899999999
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
.++.+++.+..+++|++||||
T Consensus 102 ~~fa~~~~~~~~~ldvLInNA 122 (314)
T KOG1208|consen 102 RKFAEEFKKKEGPLDVLINNA 122 (314)
T ss_pred HHHHHHHHhcCCCccEEEeCc
Confidence 999999999999999999998
No 41
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.74 E-value=4.1e-17 Score=105.45 Aligned_cols=87 Identities=34% Similarity=0.458 Sum_probs=73.2
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~ 81 (100)
..+++++++|||+++|||.+++++|+++|++|++++| +.+.++.+.+++...+ ..+.+|++|.+++++
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R---------~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~ 74 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLAR---------GEEGLEALAAEIRAAGGEALAVVADVADAEAVQA 74 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHH
Confidence 3467899999999999999999999999999999887 4555556655554432 345689999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.++++++|++||||
T Consensus 75 ~~~~~~~~~g~iD~lInnA 93 (334)
T PRK07109 75 AADRAEEELGPIDTWVNNA 93 (334)
T ss_pred HHHHHHHHCCCCCEEEECC
Confidence 9999999999999999997
No 42
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3.7e-17 Score=102.68 Aligned_cols=85 Identities=28% Similarity=0.389 Sum_probs=71.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++++++||||++|||.+++++|+++|++|++.+| +.+.++.+...+. ....+.+|+++++++.++++.
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 71 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDL---------DEALAKETAAELG-LVVGGPLDVTDPASFAAFLDA 71 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHH
Confidence 467899999999999999999999999999999876 4555555444433 345677899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 72 ~~~~~~~id~li~~a 86 (273)
T PRK07825 72 VEADLGPIDVLVNNA 86 (273)
T ss_pred HHHHcCCCCEEEECC
Confidence 999899999999996
No 43
>PRK06720 hypothetical protein; Provisional
Probab=99.74 E-value=4e-17 Score=96.67 Aligned_cols=87 Identities=38% Similarity=0.623 Sum_probs=70.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~ 81 (100)
+.+++++++|||+++|||.++++.|++.|++|+++++ ..+..+...+++... ...+.+|+++.+++.+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 82 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI---------DQESGQATVEEITNLGGEALFVSYDMEKQGDWQR 82 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 4468899999999999999999999999999999986 333444444444322 2345789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|++||||
T Consensus 83 ~v~~~~~~~G~iDilVnnA 101 (169)
T PRK06720 83 VISITLNAFSRIDMLFQNA 101 (169)
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 9999988999999999997
No 44
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.74 E-value=4.6e-17 Score=101.81 Aligned_cols=92 Identities=18% Similarity=0.284 Sum_probs=69.1
Q ss_pred CCCCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHH
Q psy9143 5 VRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 5 ~~~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 82 (100)
+++++|+++|||++ +|||++++++|++.|++|+++.++.+ .++..+..+++.+.. .....+.+|++|++++.++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~ 77 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDE---KGRFEKKVRELTEPL-NPSLFLPCDVQDDAQIEET 77 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcc---cchHHHHHHHHHhcc-CcceEeecCcCCHHHHHHH
Confidence 45689999999986 89999999999999999988765321 011222233332211 1233567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.++++++|++||||
T Consensus 78 ~~~~~~~~g~iD~lv~na 95 (258)
T PRK07370 78 FETIKQKWGKLDILVHCL 95 (258)
T ss_pred HHHHHHHcCCCCEEEEcc
Confidence 999999999999999997
No 45
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.74 E-value=2.2e-17 Score=103.38 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=67.8
Q ss_pred CCCCEEEEecC--CCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 7 FDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 7 ~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+++|+++|||| ++|||+++++.|+++|++|+++++.. +..+.++++..+.. ....+.+|+++.++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~ 76 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD------KLEERVRKMAAELD-SELVFRCDVASDDEINQVFA 76 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH------HHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHH
Confidence 67899999997 67999999999999999999886521 12223333322221 12356789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.++++++|++||||
T Consensus 77 ~~~~~~g~iD~lVnnA 92 (261)
T PRK08690 77 DLGKHWDGLDGLVHSI 92 (261)
T ss_pred HHHHHhCCCcEEEECC
Confidence 9999999999999997
No 46
>PRK06194 hypothetical protein; Provisional
Probab=99.74 E-value=4.1e-17 Score=103.07 Aligned_cols=86 Identities=34% Similarity=0.565 Sum_probs=70.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
.+++++++||||++|||.+++++|+++|++|+++++ ....+++...++... ...+.+|++|.++++++
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 73 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADV---------QQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEAL 73 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 456899999999999999999999999999999987 334444554444432 23367799999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++.+.+.++++|+|||||
T Consensus 74 ~~~~~~~~g~id~vi~~A 91 (287)
T PRK06194 74 ADAALERFGAVHLLFNNA 91 (287)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999999999999997
No 47
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=5.7e-17 Score=101.76 Aligned_cols=87 Identities=14% Similarity=0.165 Sum_probs=67.5
Q ss_pred CCCCEEEEecCCC--chhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 7 FDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 7 ~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+++|+++|||+++ |||.++++.|++.|++|++++++. ...+..+++.... .....+.+|++|+++++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~------~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~ 76 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND------KLKGRVEEFAAQL-GSDIVLPCDVAEDASIDAMFA 76 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch------hHHHHHHHHHhcc-CCceEeecCCCCHHHHHHHHH
Confidence 6789999999986 999999999999999999887621 0122222222221 122356789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.++++++|++||||
T Consensus 77 ~~~~~~g~iD~linnA 92 (262)
T PRK07984 77 ELGKVWPKFDGFVHSI 92 (262)
T ss_pred HHHhhcCCCCEEEECC
Confidence 9999999999999997
No 48
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.73 E-value=3.5e-17 Score=102.06 Aligned_cols=86 Identities=41% Similarity=0.635 Sum_probs=69.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH---hcCCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR---SKGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~ 81 (100)
+++++|+++|||+++|||.+++++|+++|++|++++++ ...+++.+.+. .....+.+|+++.+++.+
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~ 80 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG----------TNWDETRRLIEKEGRKVTFVQVDLTKPESAEK 80 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----------cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 45789999999999999999999999999999998772 12223332332 233456789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|++||||
T Consensus 81 ~~~~~~~~~g~id~li~~a 99 (258)
T PRK06935 81 VVKEALEEFGKIDILVNNA 99 (258)
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 9999999999999999996
No 49
>PLN02253 xanthoxin dehydrogenase
Probab=99.73 E-value=4.7e-17 Score=102.55 Aligned_cols=86 Identities=31% Similarity=0.472 Sum_probs=70.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~ 83 (100)
.+++|+++|||+++|||.+++++|+++|++|+++++ .....+++..++.. ....+.+|++|.+++.+++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 85 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL---------QDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAV 85 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHH
Confidence 467899999999999999999999999999999876 33334444444422 2345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+.+.+.++++|+|||||
T Consensus 86 ~~~~~~~g~id~li~~A 102 (280)
T PLN02253 86 DFTVDKFGTLDIMVNNA 102 (280)
T ss_pred HHHHHHhCCCCEEEECC
Confidence 99999999999999997
No 50
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.73 E-value=6.8e-17 Score=100.37 Aligned_cols=88 Identities=31% Similarity=0.473 Sum_probs=73.1
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHH
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGD 80 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 80 (100)
.+++++|+++|||+++|||.+++++|++.|++|++++| +.+..+.+.+++... ...+.+|+++.++++
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 73 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSR---------KLDGCQAVADAIVAAGGKAEALACHIGEMEQID 73 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 34678999999999999999999999999999999987 444555555555432 345678999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
.+++++.+.++++|++||||
T Consensus 74 ~~~~~~~~~~~~id~li~~a 93 (252)
T PRK07035 74 ALFAHIRERHGRLDILVNNA 93 (252)
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 99999999999999999986
No 51
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1e-16 Score=101.98 Aligned_cols=87 Identities=31% Similarity=0.428 Sum_probs=72.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~ 81 (100)
.++++++++||||++|||.+++++|+++|++|++++| +.+.++.+.+++... ...+.+|++|.+++.+
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R---------~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~ 106 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVAR---------REDLLDAVADRITRAGGDAMAVPCDLSDLDAVDA 106 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 4567899999999999999999999999999999987 455555555555432 2356789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++.+.+.++++|++||||
T Consensus 107 ~~~~~~~~~g~id~li~~A 125 (293)
T PRK05866 107 LVADVEKRIGGVDILINNA 125 (293)
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 9999999999999999997
No 52
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=2.9e-17 Score=103.48 Aligned_cols=87 Identities=17% Similarity=0.268 Sum_probs=68.7
Q ss_pred CCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 7 FDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 7 ~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
|++|+++|||++ +|||+++++.|++.|++|++++|+. +..+.++++.+++.. ...+.+|+++.++++++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~------~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~ 80 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD------ALKKRVEPLAAELGA-FVAGHCDVTDEASIDAVFE 80 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch------HHHHHHHHHHHhcCC-ceEEecCCCCHHHHHHHHH
Confidence 568999999997 7999999999999999999886521 012334444333321 2346789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.++++++|++||||
T Consensus 81 ~~~~~~g~iD~lv~nA 96 (272)
T PRK08159 81 TLEKKWGKLDFVVHAI 96 (272)
T ss_pred HHHHhcCCCcEEEECC
Confidence 9999999999999997
No 53
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.73 E-value=7.4e-17 Score=99.96 Aligned_cols=87 Identities=39% Similarity=0.593 Sum_probs=70.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~ 81 (100)
+.+++++++|||++++||.+++++|+++|++|++++| .....+.+.+++.. ....+.+|+++.+++.+
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADI---------NAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKA 72 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 4467899999999999999999999999999999987 33333444444432 23456789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|+|||||
T Consensus 73 ~~~~~~~~~~~id~vi~~a 91 (250)
T PRK07774 73 MADATVSAFGGIDYLVNNA 91 (250)
T ss_pred HHHHHHHHhCCCCEEEECC
Confidence 9999999999999999997
No 54
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=3.6e-17 Score=102.38 Aligned_cols=87 Identities=16% Similarity=0.228 Sum_probs=66.7
Q ss_pred CCCCEEEEecCCC--chhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 7 FDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 7 ~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+++|+++|||+++ |||+++++.|+++|++|++.+|+. ...+..+++..+.. ....+.+|++|+++++++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~------~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~ 78 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE------VLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFD 78 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch------HHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHH
Confidence 5789999999997 899999999999999999887621 01122222222211 11235789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.++++++|+|||||
T Consensus 79 ~~~~~~g~iDilVnna 94 (260)
T PRK06603 79 DIKEKWGSFDFLLHGM 94 (260)
T ss_pred HHHHHcCCccEEEEcc
Confidence 9999999999999996
No 55
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.72 E-value=7.1e-17 Score=99.93 Aligned_cols=86 Identities=28% Similarity=0.419 Sum_probs=71.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.+++++++|||++++||.+++++|+++|++|++++| +.+..+...+++......+.+|+++.+++..+++.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGR---------DPASLEAARAELGESALVIRADAGDVAAQKALAQA 73 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC---------CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH
Confidence 456899999999999999999999999999999876 34444444444444445567899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~id~vi~~a 88 (249)
T PRK06500 74 LAEAFGRLDAVFINA 88 (249)
T ss_pred HHHHhCCCCEEEECC
Confidence 988899999999997
No 56
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.72 E-value=6.2e-17 Score=103.97 Aligned_cols=86 Identities=23% Similarity=0.193 Sum_probs=70.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
.+.+++++|||+++|||.++++.|+++|++|++++| +....+....++.. ....+.+|+++.+++.++
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 73 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACR---------NLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRF 73 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHH
Confidence 456899999999999999999999999999999987 44555555544432 234557899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+..+++|+|||||
T Consensus 74 ~~~~~~~~~~iD~li~nA 91 (322)
T PRK07453 74 VDDFRALGKPLDALVCNA 91 (322)
T ss_pred HHHHHHhCCCccEEEECC
Confidence 998877778999999997
No 57
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.72 E-value=8.4e-17 Score=100.70 Aligned_cols=89 Identities=38% Similarity=0.612 Sum_probs=72.8
Q ss_pred CCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccH
Q psy9143 3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDG 79 (100)
Q Consensus 3 ~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~ 79 (100)
..+.+++++++|||+++|||.+++++|+++|++|++++| +.+..+.+...+.. ....+.+|+++.+++
T Consensus 4 ~~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~ 74 (263)
T PRK07814 4 DRFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAAR---------TESQLDEVAEQIRAAGRRAHVVAADLAHPEAT 74 (263)
T ss_pred ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHH
Confidence 345678999999999999999999999999999999987 44444455444433 223456899999999
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
.++++++.+.++++|++||||
T Consensus 75 ~~~~~~~~~~~~~id~vi~~A 95 (263)
T PRK07814 75 AGLAGQAVEAFGRLDIVVNNV 95 (263)
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 999999999999999999987
No 58
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.72 E-value=9.9e-17 Score=99.81 Aligned_cols=85 Identities=38% Similarity=0.591 Sum_probs=71.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 83 (100)
+.+++++|||+++|||.+++++|+++|++|++++| +....+.+..++.. +...+.+|+++.+++++++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR---------TAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLV 73 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHH
Confidence 56899999999999999999999999999999987 34444555555443 2345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 74 ~~~~~~~g~~d~vi~~a 90 (258)
T PRK07890 74 ALALERFGRVDALVNNA 90 (258)
T ss_pred HHHHHHcCCccEEEECC
Confidence 99999999999999997
No 59
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.72 E-value=6e-17 Score=100.33 Aligned_cols=87 Identities=34% Similarity=0.523 Sum_probs=68.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++|+++|||+++|||.+++++|+++|++|++++|+ ......+...........+.+|+++.+++.+++++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS--------EPSETQQQVEALGRRFLSLTADLSDIEAIKALVDS 73 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc--------hHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 4689999999999999999999999999999998762 11112122222222334567899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~~d~li~~a 88 (248)
T TIGR01832 74 AVEEFGHIDILVNNA 88 (248)
T ss_pred HHHHcCCCCEEEECC
Confidence 988889999999996
No 60
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.72 E-value=1.1e-16 Score=100.31 Aligned_cols=89 Identities=30% Similarity=0.431 Sum_probs=73.7
Q ss_pred CCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccH
Q psy9143 3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDG 79 (100)
Q Consensus 3 ~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~ 79 (100)
+.+++.+|+++|||+++|||.+++++|+++|++|+++++ .....++....+... ...+.+|+++.+++
T Consensus 4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 74 (265)
T PRK07097 4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDI---------NQELVDKGLAAYRELGIEAHGYVCDVTDEDGV 74 (265)
T ss_pred cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 346678999999999999999999999999999999876 444555555555432 34567899999999
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
+++++++.+.++++|++||||
T Consensus 75 ~~~~~~~~~~~~~id~li~~a 95 (265)
T PRK07097 75 QAMVSQIEKEVGVIDILVNNA 95 (265)
T ss_pred HHHHHHHHHhCCCCCEEEECC
Confidence 999999999999999999997
No 61
>PRK09186 flagellin modification protein A; Provisional
Probab=99.72 E-value=1.1e-16 Score=99.42 Aligned_cols=85 Identities=21% Similarity=0.389 Sum_probs=69.7
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc-----CCceeeeccCcccHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GGKAVPDYNSVVDGDK 81 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~ 81 (100)
+++|+++|||+++|||.++++.|+++|++|++++| +.+..++..+++... ...+.+|++|++++.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADI---------DKEALNELLESLGKEFKSKKLSLVELDITDQESLEE 72 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec---------ChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHH
Confidence 46899999999999999999999999999999876 444444554444321 1234789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|++||||
T Consensus 73 ~~~~~~~~~~~id~vi~~A 91 (256)
T PRK09186 73 FLSKSAEKYGKIDGAVNCA 91 (256)
T ss_pred HHHHHHHHcCCccEEEECC
Confidence 9999999999999999997
No 62
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.7e-16 Score=99.88 Aligned_cols=94 Identities=30% Similarity=0.405 Sum_probs=71.5
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~ 81 (100)
+++++++++||||++|||.+++++|+++|++|++++|+...... ....++...+++... ...+.+|+++.+++.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~ 79 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPK--LPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA 79 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccc--hhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 34678999999999999999999999999999999875322100 111233333344332 3345689999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|++||||
T Consensus 80 ~~~~~~~~~g~id~li~~a 98 (273)
T PRK08278 80 AVAKAVERFGGIDICVNNA 98 (273)
T ss_pred HHHHHHHHhCCCCEEEECC
Confidence 9999999999999999997
No 63
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.1e-16 Score=99.24 Aligned_cols=86 Identities=43% Similarity=0.628 Sum_probs=70.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH--hcCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~ 83 (100)
.+++++++|||++++||.+++++|+++|++|++++| +.+..+.....+. .....+.+|++|.+++.+++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADR---------DAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALV 72 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecC---------CHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 367899999999999999999999999999999987 3333334333332 22345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.++++++|++||||
T Consensus 73 ~~i~~~~~~id~vi~~a 89 (252)
T PRK06138 73 DFVAARWGRLDVLVNNA 89 (252)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99999999999999986
No 64
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=9.1e-17 Score=100.61 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=68.3
Q ss_pred CCCCEEEEecC--CCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 7 FDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 7 ~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+++|+++|||+ ++|||++++++|++.|++|+++++.. +..+.++++.+++.. ...+.+|++|+++++++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~ 76 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD------RFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFA 76 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch------HHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHH
Confidence 57899999996 67999999999999999999886521 123334443333222 2346789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.++++++|++||||
T Consensus 77 ~~~~~~g~iD~lvnnA 92 (260)
T PRK06997 77 SLGQHWDGLDGLVHSI 92 (260)
T ss_pred HHHHHhCCCcEEEEcc
Confidence 9999999999999997
No 65
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.71 E-value=1e-16 Score=99.82 Aligned_cols=89 Identities=30% Similarity=0.502 Sum_probs=68.8
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHH
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 83 (100)
.+++++|+++|||+++|||.+++++|+++|++|+++++. ...+..+.+ .........+.+|+++.+++.+++
T Consensus 5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~-------~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~ 76 (253)
T PRK08993 5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV-------EPTETIEQV-TALGRRFLSLTADLRKIDGIPALL 76 (253)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCc-------chHHHHHHH-HhcCCeEEEEECCCCCHHHHHHHH
Confidence 346789999999999999999999999999999987652 111222222 122222345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.++++++|++||||
T Consensus 77 ~~~~~~~~~~D~li~~A 93 (253)
T PRK08993 77 ERAVAEFGHIDILVNNA 93 (253)
T ss_pred HHHHHHhCCCCEEEECC
Confidence 99999999999999997
No 66
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.71 E-value=1.4e-16 Score=98.60 Aligned_cols=86 Identities=44% Similarity=0.645 Sum_probs=70.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH--hcCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~ 83 (100)
++++++++|||++++||.+++++|+++|++|++++| +....+.+...+. .....+.+|+.+++++.+++
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDR---------NEEAAERVAAEILAGGRAIAVAADVSDEADVEAAV 72 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 467899999999999999999999999999999987 4444444444443 22345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 73 ~~~~~~~~~~d~vi~~a 89 (251)
T PRK07231 73 AAALERFGSVDILVNNA 89 (251)
T ss_pred HHHHHHhCCCCEEEECC
Confidence 99988899999999986
No 67
>PRK09242 tropinone reductase; Provisional
Probab=99.71 E-value=1.5e-16 Score=99.08 Aligned_cols=89 Identities=25% Similarity=0.357 Sum_probs=73.5
Q ss_pred CCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc-----CCceeeeccCcc
Q psy9143 3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GGKAVPDYNSVV 77 (100)
Q Consensus 3 ~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~ 77 (100)
.++++.+|+++|||+++|||.+++++|+++|++|++++| +.+..+++..++... ...+.+|+++.+
T Consensus 3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~ 73 (257)
T PRK09242 3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVAR---------DADALAQARDELAEEFPEREVHGLAADVSDDE 73 (257)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH
Confidence 356788999999999999999999999999999999987 444455555554332 234577999999
Q ss_pred cHHHHHHHHHHHcCCccEEEecC
Q psy9143 78 DGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 78 ~~~~~~~~~~~~~~~id~li~~A 100 (100)
++..+++++.+.++++|++||||
T Consensus 74 ~~~~~~~~~~~~~g~id~li~~a 96 (257)
T PRK09242 74 DRRAILDWVEDHWDGLHILVNNA 96 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 99999999999999999999996
No 68
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.71 E-value=1.7e-16 Score=98.48 Aligned_cols=87 Identities=33% Similarity=0.453 Sum_probs=69.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++|+++|||+++|||.++++.|+++|++|+++.++ .....+.+..++......+.+|+++.+++.+++++
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQ--------SEDAAEALADELGDRAIALQADVTDREQVQAMFAT 73 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCC--------CHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH
Confidence 4578999999999999999999999999999886542 33344444444333344567899999999999999
Q ss_pred HHHHcCC-ccEEEecC
Q psy9143 86 ALENFGR-IDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~-id~li~~A 100 (100)
+.+.+++ +|++||||
T Consensus 74 ~~~~~g~~id~li~~a 89 (253)
T PRK08642 74 ATEHFGKPITTVVNNA 89 (253)
T ss_pred HHHHhCCCCeEEEECC
Confidence 8888887 99999996
No 69
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.71 E-value=1.8e-16 Score=97.87 Aligned_cols=86 Identities=28% Similarity=0.388 Sum_probs=70.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++++++|||++++||.+++++|+++|+.|++.++ ....++.+...+........+|+++.+++++++++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT---------RVEKLEALAAELGERVKIFPANLSDRDEVKALGQK 73 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence 467899999999999999999999999998888765 44444444444333344567899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~id~vi~~a 88 (245)
T PRK12936 74 AEADLEGVDILVNNA 88 (245)
T ss_pred HHHHcCCCCEEEECC
Confidence 999999999999997
No 70
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.3e-16 Score=98.05 Aligned_cols=86 Identities=37% Similarity=0.569 Sum_probs=70.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
.+++|+++|||+++|||.+++++|+++|++|++++| +.+..+...+.+.. ....+.+|+++.+++..+
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 74 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADR---------DAAGGEETVALIREAGGEALFVACDVTRDAEVKAL 74 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 467899999999999999999999999999999987 34444444444433 234567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 75 ~~~~~~~~g~id~li~~a 92 (253)
T PRK06172 75 VEQTIAAYGRLDYAFNNA 92 (253)
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 999999999999999996
No 71
>PRK06484 short chain dehydrogenase; Validated
Probab=99.71 E-value=1.2e-16 Score=108.09 Aligned_cols=85 Identities=22% Similarity=0.366 Sum_probs=72.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
..+|+++|||+++|||++++++|+++|++|++++| +...++.+.+++......+.+|++|.+++.++++++
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 337 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDR---------DAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQI 337 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHH
Confidence 36899999999999999999999999999999987 455555555554444455778999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.++++++|+|||||
T Consensus 338 ~~~~g~id~li~nA 351 (520)
T PRK06484 338 QARWGRLDVLVNNA 351 (520)
T ss_pred HHHcCCCCEEEECC
Confidence 99999999999997
No 72
>PRK07985 oxidoreductase; Provisional
Probab=99.71 E-value=1.6e-16 Score=101.12 Aligned_cols=88 Identities=30% Similarity=0.363 Sum_probs=69.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
++++|+++|||+++|||.+++++|+++|++|++.+++. .....+++.+.+.. ....+.+|+++.+++.++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 118 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPV-------EEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSL 118 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCc-------chhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHH
Confidence 46789999999999999999999999999999876521 22223333333322 233567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 119 ~~~~~~~~g~id~lv~~A 136 (294)
T PRK07985 119 VHEAHKALGGLDIMALVA 136 (294)
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 999999999999999996
No 73
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.70 E-value=2.1e-16 Score=101.04 Aligned_cols=87 Identities=47% Similarity=0.655 Sum_probs=70.1
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~ 81 (100)
.++++|+++|||+++|||.+++++|+++|++|++.+++ .....+...+++... ...+.+|+++.+++.+
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~--------~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~ 79 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA--------SALDASDVLDEIRAAGAKAVAVAGDISQRATADE 79 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC--------chhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 45789999999999999999999999999999998762 223334444444432 3346779999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++.+.+ ++++|+|||||
T Consensus 80 ~~~~~~~-~g~iD~li~nA 97 (306)
T PRK07792 80 LVATAVG-LGGLDIVVNNA 97 (306)
T ss_pred HHHHHHH-hCCCCEEEECC
Confidence 9999888 89999999997
No 74
>PRK06484 short chain dehydrogenase; Validated
Probab=99.70 E-value=1.4e-16 Score=107.71 Aligned_cols=85 Identities=29% Similarity=0.404 Sum_probs=72.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
.++|+++|||+++|||.+++++|+++|++|++++| ..+.++.+..++......+.+|+++++++.++++++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR---------NVERARERADSLGPDHHALAMDVSDEAQIREGFEQL 73 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHH
Confidence 46899999999999999999999999999999977 445555555554444455788999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.++++++|+|||||
T Consensus 74 ~~~~g~iD~li~na 87 (520)
T PRK06484 74 HREFGRIDVLVNNA 87 (520)
T ss_pred HHHhCCCCEEEECC
Confidence 99999999999997
No 75
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.70 E-value=3.6e-16 Score=97.28 Aligned_cols=91 Identities=33% Similarity=0.469 Sum_probs=75.2
Q ss_pred CCCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcc
Q psy9143 1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVV 77 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~ 77 (100)
|.+...+.+++++|||++++||.+++++|+++|++|++++| +.+.++.+..++.. ....+.+|+++.+
T Consensus 1 ~~~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~ 71 (258)
T PRK06949 1 MGRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASR---------RVERLKELRAEIEAEGGAAHVVSLDVTDYQ 71 (258)
T ss_pred CCcccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 55556788999999999999999999999999999999877 45555555554433 2345678999999
Q ss_pred cHHHHHHHHHHHcCCccEEEecC
Q psy9143 78 DGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 78 ~~~~~~~~~~~~~~~id~li~~A 100 (100)
++.++++++.+.++++|++||||
T Consensus 72 ~~~~~~~~~~~~~~~~d~li~~a 94 (258)
T PRK06949 72 SIKAAVAHAETEAGTIDILVNNS 94 (258)
T ss_pred HHHHHHHHHHHhcCCCCEEEECC
Confidence 99999999988899999999986
No 76
>PRK06398 aldose dehydrogenase; Validated
Probab=99.70 E-value=1.5e-16 Score=99.49 Aligned_cols=78 Identities=29% Similarity=0.411 Sum_probs=66.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++|+++|||+++|||.+++++|++.|++|++++|+... . .....+.+|+++++++++++++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~---------~--------~~~~~~~~D~~~~~~i~~~~~~ 65 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS---------Y--------NDVDYFKVDVSNKEQVIKGIDY 65 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc---------c--------CceEEEEccCCCHHHHHHHHHH
Confidence 4678999999999999999999999999999998873211 0 1244678899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.++++++|++||||
T Consensus 66 ~~~~~~~id~li~~A 80 (258)
T PRK06398 66 VISKYGRIDILVNNA 80 (258)
T ss_pred HHHHcCCCCEEEECC
Confidence 999999999999997
No 77
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.70 E-value=3.6e-16 Score=97.32 Aligned_cols=88 Identities=31% Similarity=0.414 Sum_probs=73.0
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHH
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGD 80 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 80 (100)
.+.+++++++|||++++||.+++++|+++|++|++++| +.+.++.+..++... ...+.+|+++.+++.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 76 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGR---------NAATLEAAVAALRAAGGAAEALAFDIADEEAVA 76 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 45578999999999999999999999999999999987 444455555554432 345678999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.+.++++|++||||
T Consensus 77 ~~~~~~~~~~~~id~vi~~a 96 (256)
T PRK06124 77 AAFARIDAEHGRLDILVNNV 96 (256)
T ss_pred HHHHHHHHhcCCCCEEEECC
Confidence 99999999999999999996
No 78
>PRK08643 acetoin reductase; Validated
Probab=99.70 E-value=2.4e-16 Score=98.07 Aligned_cols=83 Identities=29% Similarity=0.445 Sum_probs=69.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~ 85 (100)
+|+++|||+++|||.+++++|+++|++|++++| +.+..+.+..++... ...+.+|+++++.+.+++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 72 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDY---------NEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQ 72 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 689999999999999999999999999999987 444444555554432 23467899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.++++++|++||||
T Consensus 73 ~~~~~~~id~vi~~a 87 (256)
T PRK08643 73 VVDTFGDLNVVVNNA 87 (256)
T ss_pred HHHHcCCCCEEEECC
Confidence 999999999999997
No 79
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.70 E-value=1.9e-16 Score=101.59 Aligned_cols=84 Identities=25% Similarity=0.199 Sum_probs=68.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcC-CeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 83 (100)
++++++|||+++|||.++++.|+++| ++|++++| +.+..+++.+++.. ....+.+|+++.+++.+++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 72 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACR---------DFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFV 72 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeC---------CHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHH
Confidence 47899999999999999999999999 99999877 44455555555432 2234568999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 73 ~~~~~~~~~iD~lI~nA 89 (314)
T TIGR01289 73 QQFRESGRPLDALVCNA 89 (314)
T ss_pred HHHHHhCCCCCEEEECC
Confidence 99988889999999997
No 80
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.70 E-value=2.3e-16 Score=98.47 Aligned_cols=81 Identities=26% Similarity=0.352 Sum_probs=68.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHHHHHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
+++|||+++|||.+++++|+++|++|++++| +.+.+++..+++.. ....+.+|+++.++++++++++.+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~ 72 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSR---------NEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWE 72 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999999999999877 44555555555543 234567899999999999999999
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
+++++|+|||||
T Consensus 73 ~~g~id~li~na 84 (259)
T PRK08340 73 LLGGIDALVWNA 84 (259)
T ss_pred hcCCCCEEEECC
Confidence 999999999997
No 81
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.70 E-value=1.6e-16 Score=99.06 Aligned_cols=83 Identities=22% Similarity=0.252 Sum_probs=68.5
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
+++++|||+++|||.+++++|+++|++|++++| +.+.++.+.+++.. ....+.+|+++.+++.++++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 72 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVAR---------RTDALQAFAARLPKAARVSVYAADVRDADALAAAAADF 72 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence 478999999999999999999999999999987 44444444444332 3345678999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.++++++|++||||
T Consensus 73 ~~~~g~id~lv~~a 86 (257)
T PRK07024 73 IAAHGLPDVVIANA 86 (257)
T ss_pred HHhCCCCCEEEECC
Confidence 99999999999996
No 82
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.70 E-value=1.6e-16 Score=99.11 Aligned_cols=85 Identities=40% Similarity=0.619 Sum_probs=68.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
++++|+++|||+++|||.+++++|+++|++|++++|+ . ......+++... ...+.+|+++.+++.++
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~---------~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 74 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS---------E-LVHEVAAELRAAGGEALALTADLETYAGAQAA 74 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc---------h-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHH
Confidence 3678999999999999999999999999999998762 1 122333344332 23467899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 75 ~~~~~~~~~~id~lv~nA 92 (260)
T PRK12823 75 MAAAVEAFGRIDVLINNV 92 (260)
T ss_pred HHHHHHHcCCCeEEEECC
Confidence 999999999999999997
No 83
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.70 E-value=1.2e-16 Score=93.74 Aligned_cols=84 Identities=31% Similarity=0.551 Sum_probs=68.9
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~ 85 (100)
|+++||||++|||.+++++|+++|. .|++++|+ ...+..+++..+++... ..+.+|+++.+++++++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-------~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS-------EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEE 73 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-------CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-------ccccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999999999976 67777662 12566666666666433 4556799999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~ld~li~~a 88 (167)
T PF00106_consen 74 VIKRFGPLDILINNA 88 (167)
T ss_dssp HHHHHSSESEEEEEC
T ss_pred ccccccccccccccc
Confidence 999999999999997
No 84
>PRK06128 oxidoreductase; Provisional
Probab=99.70 E-value=4.1e-16 Score=99.36 Aligned_cols=88 Identities=32% Similarity=0.501 Sum_probs=69.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
.+++|+++|||+++|||.++++.|+++|++|++..++. .....++..+.+... ...+.+|+++.++++++
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 124 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPE-------EEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQL 124 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCc-------chHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence 36789999999999999999999999999998876521 122233333343332 23456899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|+|||||
T Consensus 125 ~~~~~~~~g~iD~lV~nA 142 (300)
T PRK06128 125 VERAVKELGGLDILVNIA 142 (300)
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 999999999999999997
No 85
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.70 E-value=2e-16 Score=98.96 Aligned_cols=85 Identities=32% Similarity=0.485 Sum_probs=70.8
Q ss_pred CCCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHH
Q psy9143 1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGD 80 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 80 (100)
|.+.+++++|+++|||+++|||.+++++|+++|++|++++++.... . ......+.+|+++.++++
T Consensus 1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~---------~------~~~~~~~~~D~~~~~~~~ 65 (266)
T PRK06171 1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG---------Q------HENYQFVPTDVSSAEEVN 65 (266)
T ss_pred CcccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc---------c------cCceEEEEccCCCHHHHH
Confidence 5566678899999999999999999999999999999988742211 0 012345678999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.+.++++|++||||
T Consensus 66 ~~~~~~~~~~g~id~li~~A 85 (266)
T PRK06171 66 HTVAEIIEKFGRIDGLVNNA 85 (266)
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 99999999999999999997
No 86
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.70 E-value=2.1e-16 Score=99.62 Aligned_cols=84 Identities=27% Similarity=0.311 Sum_probs=68.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
++++++|||++||||.+++++|+++|++|++++| +.+..+.+......+...+.+|+++.+++.++++.+.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVR---------SEAARADFEALHPDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeC---------CHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHH
Confidence 4688999999999999999999999999999987 4444444433322334456789999999999999999
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
+.++++|++||||
T Consensus 74 ~~~~~~d~vv~~a 86 (277)
T PRK06180 74 ATFGPIDVLVNNA 86 (277)
T ss_pred HHhCCCCEEEECC
Confidence 8899999999997
No 87
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.70 E-value=2.9e-16 Score=100.40 Aligned_cols=87 Identities=22% Similarity=0.347 Sum_probs=64.0
Q ss_pred CCCCCCCEEEEecC--CCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----------------c
Q psy9143 4 QVRFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----------------K 65 (100)
Q Consensus 4 ~~~~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 65 (100)
.+++++|+++|||+ ++|||.++++.|++.|++|++ .+ ..+.++.+...+.. .
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~---------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GT---------WVPALNIFETSLRRGKFDESRKLPDGSLMEI 73 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-Ee---------CcchhhHHHHhhhccccchhhhcccccccCc
Confidence 35688999999999 799999999999999999988 44 22222222222211 0
Q ss_pred CCceeeec--cCcc------------------cHHHHHHHHHHHcCCccEEEecC
Q psy9143 66 GGKAVPDY--NSVV------------------DGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 66 ~~~~~~d~--~~~~------------------~~~~~~~~~~~~~~~id~li~~A 100 (100)
...+.+|+ ++.+ +++++++++.+++|++|+|||||
T Consensus 74 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNA 128 (303)
T PLN02730 74 TKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSL 128 (303)
T ss_pred CeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 13455677 4444 68899999999999999999997
No 88
>KOG4169|consensus
Probab=99.70 E-value=5.3e-17 Score=98.67 Aligned_cols=90 Identities=30% Similarity=0.347 Sum_probs=71.2
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-cCCceeeeccCcccHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 83 (100)
|+++||++++||+.+|||++++++|+++|.++.+++.+. ++.+...++++..+. ...+.+||+++..++++++
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~------En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f 74 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSE------ENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAF 74 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhh------hCHHHHHHHhccCCCceEEEEEeccccHHHHHHHH
Confidence 467899999999999999999999999999776665422 233444344333222 2356789999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++..++|.||++||+|
T Consensus 75 ~ki~~~fg~iDIlINgA 91 (261)
T KOG4169|consen 75 DKILATFGTIDILINGA 91 (261)
T ss_pred HHHHHHhCceEEEEccc
Confidence 99999999999999997
No 89
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.70 E-value=3.2e-16 Score=97.74 Aligned_cols=87 Identities=31% Similarity=0.503 Sum_probs=71.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~ 81 (100)
+++++++++|||++++||.+++++|+++|++|++++| .....+...+.+.. +...+.+|++|++++.+
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~ 78 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSAR---------KAEELEEAAAHLEALGIDALWIAADVADEADIER 78 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 4568899999999999999999999999999999877 44444454444433 23457789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|++||||
T Consensus 79 ~~~~~~~~~~~id~vi~~a 97 (259)
T PRK08213 79 LAEETLERFGHVDILVNNA 97 (259)
T ss_pred HHHHHHHHhCCCCEEEECC
Confidence 9999998889999999996
No 90
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.70 E-value=1.5e-16 Score=99.20 Aligned_cols=85 Identities=24% Similarity=0.354 Sum_probs=70.5
Q ss_pred CCCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHH
Q psy9143 1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGD 80 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 80 (100)
|+...++++++++|||+++|||.+++++|+++|++|++++|+. .. ........+.+|+++.++++
T Consensus 1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~---------~~------~~~~~~~~~~~D~~~~~~~~ 65 (260)
T PRK06523 1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR---------PD------DLPEGVEFVAADLTTAEGCA 65 (260)
T ss_pred CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCCh---------hh------hcCCceeEEecCCCCHHHHH
Confidence 4555678899999999999999999999999999999998731 11 11223446778999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.+.++++|++||||
T Consensus 66 ~~~~~~~~~~~~id~vi~~a 85 (260)
T PRK06523 66 AVARAVLERLGGVDILVHVL 85 (260)
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 99999999999999999997
No 91
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.69 E-value=3.2e-16 Score=97.63 Aligned_cols=86 Identities=30% Similarity=0.469 Sum_probs=69.7
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~ 81 (100)
++|++++++|||+++|||.+++++|+++|+++++++|+ .+.. ++.+++.. ....+.+|+++.+++.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~---------~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS---------APDD-EFAEELRALQPRAEFVQVDLTDDAQCRD 72 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC---------hhhH-HHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 56789999999999999999999999999999998773 2222 22333322 33456789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|++||||
T Consensus 73 ~~~~~~~~~~~id~vi~~a 91 (258)
T PRK08628 73 AVEQTVAKFGRIDGLVNNA 91 (258)
T ss_pred HHHHHHHhcCCCCEEEECC
Confidence 9999999999999999997
No 92
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.69 E-value=1.7e-16 Score=98.68 Aligned_cols=82 Identities=28% Similarity=0.397 Sum_probs=67.7
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+++++|+++|||+++|||.+++++|+++|++|++++|+. +. .........+.+|+.+.+++.++++
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~---------~~-----~~~~~~~~~~~~D~~~~~~~~~~~~ 67 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRA---------PE-----TVDGRPAEFHAADVRDPDQVAALVD 67 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCh---------hh-----hhcCCceEEEEccCCCHHHHHHHHH
Confidence 357899999999999999999999999999999998732 11 0112233456789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
.+.+.++++|++||||
T Consensus 68 ~~~~~~~~id~vi~~a 83 (252)
T PRK07856 68 AIVERHGRLDVLVNNA 83 (252)
T ss_pred HHHHHcCCCCEEEECC
Confidence 9999999999999997
No 93
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4.2e-16 Score=97.07 Aligned_cols=83 Identities=37% Similarity=0.570 Sum_probs=69.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
|++++++|||+++|||.+++++|+++|++|++++| +....+.....+. ...+.+|+++.++++++++++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~ 73 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDI---------DPEAGKAAADEVG--GLFVPTDVTDEDAVNALFDTA 73 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHcC--CcEEEeeCCCHHHHHHHHHHH
Confidence 67899999999999999999999999999999876 3344444333332 246778999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.+.++++|++||||
T Consensus 74 ~~~~~~id~vi~~a 87 (255)
T PRK06057 74 AETYGSVDIAFNNA 87 (255)
T ss_pred HHHcCCCCEEEECC
Confidence 88889999999986
No 94
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.69 E-value=5.6e-16 Score=96.52 Aligned_cols=88 Identities=42% Similarity=0.661 Sum_probs=71.8
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHH
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGD 80 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~ 80 (100)
.+.+++++++|||+++|||.+++++|+++|++++++++ .....+.+..++.. ....+.+|+++.+++.
T Consensus 6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~ 76 (255)
T PRK06113 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI---------NADAANHVVDEIQQLGGQAFACRCDITSEQELS 76 (255)
T ss_pred ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH
Confidence 45678999999999999999999999999999998876 34444444444432 2345578999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
+++..+.+.++++|++||||
T Consensus 77 ~~~~~~~~~~~~~d~li~~a 96 (255)
T PRK06113 77 ALADFALSKLGKVDILVNNA 96 (255)
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 99999988899999999996
No 95
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.69 E-value=3.8e-16 Score=97.39 Aligned_cols=91 Identities=29% Similarity=0.405 Sum_probs=69.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~ 81 (100)
..+++++++|||+++|||.+++++|+++|++++++.++.. ...+..+...+++.. ....+.+|+++++++.+
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 78 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSA-----ASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEK 78 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCc-----cchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHH
Confidence 4467899999999999999999999999999666654321 122333344334332 23456789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|++||||
T Consensus 79 ~~~~~~~~~~~id~li~~a 97 (257)
T PRK12744 79 LFDDAKAAFGRPDIAINTV 97 (257)
T ss_pred HHHHHHHhhCCCCEEEECC
Confidence 9999988899999999997
No 96
>PRK05599 hypothetical protein; Provisional
Probab=99.69 E-value=4.8e-16 Score=96.62 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=67.8
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC----CceeeeccCcccHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG----GKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~ 85 (100)
++++|||+++|||.+++++|+ +|++|++++| +.+.++++.+++...+ ..+.+|++|.+++++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 70 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAAR---------RPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ 70 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeC---------CHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence 468999999999999999999 5999999977 4556666666665432 3467899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 71 ~~~~~g~id~lv~na 85 (246)
T PRK05599 71 TQELAGEISLAVVAF 85 (246)
T ss_pred HHHhcCCCCEEEEec
Confidence 999999999999997
No 97
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4.2e-16 Score=96.92 Aligned_cols=83 Identities=35% Similarity=0.495 Sum_probs=68.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~ 85 (100)
+|+++|||+++|||.+++++|+++|++|++++| +....+.+...+.. ....+.+|+++++++++++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGR---------TKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQ 71 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 578999999999999999999999999999987 33444444444432 234567899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 72 ~~~~~~~id~lI~~a 86 (252)
T PRK07677 72 IDEKFGRIDALINNA 86 (252)
T ss_pred HHHHhCCccEEEECC
Confidence 999999999999996
No 98
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4.4e-16 Score=96.82 Aligned_cols=86 Identities=33% Similarity=0.523 Sum_probs=68.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-cCCceeeeccCcccHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 83 (100)
+++.+++++|||++++||.+++++|+++|++|++++|+ ... ......+.. ....+.+|+++.+++.+++
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~---------~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 80 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS---------EDV-AEVAAQLLGGNAKGLVCDVSDSQSVEAAV 80 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---------HHH-HHHHHHhhCCceEEEEecCCCHHHHHHHH
Confidence 46789999999999999999999999999999998872 221 222222222 2235678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 81 ~~~~~~~~~~d~vi~~a 97 (255)
T PRK06841 81 AAVISAFGRIDILVNSA 97 (255)
T ss_pred HHHHHHhCCCCEEEECC
Confidence 99999899999999996
No 99
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=5.9e-16 Score=96.43 Aligned_cols=84 Identities=30% Similarity=0.408 Sum_probs=67.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++|+++|||+++|||.+++++|+++|++|+++.++ .....+.+.. .....+.+|+++.+++.+++++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~--------~~~~~~~l~~---~~~~~~~~Dl~~~~~~~~~~~~ 72 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS--------AENEAKELRE---KGVFTIKCDVGNRDQVKKSKEV 72 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC--------cHHHHHHHHh---CCCeEEEecCCCHHHHHHHHHH
Confidence 4678999999999999999999999999999887652 2222222221 1244667899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 73 ~~~~~~~id~li~~a 87 (255)
T PRK06463 73 VEKEFGRVDVLVNNA 87 (255)
T ss_pred HHHHcCCCCEEEECC
Confidence 999999999999997
No 100
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.68 E-value=4.8e-16 Score=96.57 Aligned_cols=85 Identities=38% Similarity=0.558 Sum_probs=70.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 83 (100)
+++++++|||++++||.+++++|+++|++|++++| +.+..+....++.. +...+.+|+++.+++.+++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 72 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADL---------NDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGI 72 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 56799999999999999999999999999999987 44444555444443 2345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 73 ~~~~~~~~~~d~vi~~a 89 (258)
T PRK12429 73 DYAVETFGGVDILVNNA 89 (258)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99998899999999986
No 101
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.68 E-value=5.2e-16 Score=97.70 Aligned_cols=84 Identities=31% Similarity=0.404 Sum_probs=69.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
++++++|||++++||.+++++|+++|++|++++| +.+.++.+.+........+.+|+++.+++.++++++.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATAR---------DTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAV 72 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999887 4444444444433344556789999999999999998
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
+.++++|++||||
T Consensus 73 ~~~~~~d~vi~~a 85 (275)
T PRK08263 73 EHFGRLDIVVNNA 85 (275)
T ss_pred HHcCCCCEEEECC
Confidence 8899999999997
No 102
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.68 E-value=6.9e-16 Score=95.61 Aligned_cols=83 Identities=25% Similarity=0.310 Sum_probs=68.6
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~ 83 (100)
+++++|||+++|||.+++++|+++|++|++++| +.+..+.+...+.. ....+.+|+++.+++.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCAR---------RTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVF 72 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHH
Confidence 678999999999999999999999999999887 44444444444332 2345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 73 ~~~~~~~~~id~vi~~a 89 (248)
T PRK08251 73 AEFRDELGGLDRVIVNA 89 (248)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99999999999999997
No 103
>PRK06182 short chain dehydrogenase; Validated
Probab=99.68 E-value=7.5e-16 Score=96.83 Aligned_cols=81 Identities=28% Similarity=0.351 Sum_probs=67.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
++++++|||+++|||.+++++|+++|++|++++| +.+.++.+. ......+.+|+++.+++.++++++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r---------~~~~l~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~ 69 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAAR---------RVDKMEDLA---SLGVHPLSLDVTDEASIKAAVDTII 69 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHH---hCCCeEEEeeCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999877 344443332 2234567889999999999999999
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
+.++++|++||||
T Consensus 70 ~~~~~id~li~~a 82 (273)
T PRK06182 70 AEEGRIDVLVNNA 82 (273)
T ss_pred HhcCCCCEEEECC
Confidence 9999999999997
No 104
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.68 E-value=8.2e-16 Score=95.80 Aligned_cols=86 Identities=34% Similarity=0.534 Sum_probs=70.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
.+++++++|||++++||.++++.|+++|++|++++| +++..++..+.+... ...+.+|+++.+.+.++
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADL---------NQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAG 74 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC---------ChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHH
Confidence 356899999999999999999999999999999887 444444444444432 23457899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 75 ~~~~~~~~~~~d~vi~~a 92 (262)
T PRK13394 75 IDKVAERFGSVDILVSNA 92 (262)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999888889999999996
No 105
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.68 E-value=5.7e-16 Score=96.75 Aligned_cols=85 Identities=29% Similarity=0.509 Sum_probs=68.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
++.+++++|||+++|||.+++++|+++|++|++++|+ .. .......+.. ....+.+|+++.++++++
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~---------~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 72 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDIS---------PE-IEKLADELCGRGHRCTAVVADVRDPASVAAA 72 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC---------HH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHH
Confidence 4678999999999999999999999999999999772 22 2222222222 233567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 73 ~~~~~~~~~~id~vi~~a 90 (263)
T PRK08226 73 IKRAKEKEGRIDILVNNA 90 (263)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999999999999997
No 106
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.68 E-value=8.2e-16 Score=96.67 Aligned_cols=86 Identities=26% Similarity=0.339 Sum_probs=70.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDGD 80 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~ 80 (100)
.|++++++|||++++||.+++++|+++|++|++++| ..+..+....++.. +...+.+|+++++++.
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~ 74 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGR---------NPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVA 74 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHH
Confidence 467899999999999999999999999999999876 33444444444332 2334567999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.++++++|++||||
T Consensus 75 ~~~~~~~~~~~~~d~li~~a 94 (276)
T PRK05875 75 RAVDAATAWHGRLHGVVHCA 94 (276)
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 99999999999999999986
No 107
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.1e-15 Score=94.51 Aligned_cols=86 Identities=31% Similarity=0.459 Sum_probs=70.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
.+++++++|||++++||.++++.|+++|++|+++++ ..+..+...+++... ...+.+|+++.+++.++
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDG---------LAAEARELAAALEAAGGRAHAIAADLADPASVQRF 74 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 356899999999999999999999999999999876 444444444444332 34567799999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 75 ~~~~~~~~~~id~vi~~a 92 (250)
T PRK12939 75 FDAAAAALGGLDGLVNNA 92 (250)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999998889999999986
No 108
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.67 E-value=8.4e-16 Score=96.06 Aligned_cols=85 Identities=32% Similarity=0.533 Sum_probs=68.6
Q ss_pred CCCCEEEEecCCC-chhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccHH
Q psy9143 7 FDGRVAIVTGAGA-GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDGD 80 (100)
Q Consensus 7 ~~~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~ 80 (100)
+.+++++|||+++ |||.++++.|+++|++|+++++ ....++...+++.. ....+.+|+++.++++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 85 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDI---------HERRLGETADELAAELGLGRVEAVVCDVTSEAQVD 85 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHH
Confidence 4689999999985 9999999999999999999876 33444444444432 2334567999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++++.+.++++|++||||
T Consensus 86 ~~~~~~~~~~g~id~li~~a 105 (262)
T PRK07831 86 ALIDAAVERLGRLDVLVNNA 105 (262)
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 99999988899999999997
No 109
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.67 E-value=9e-16 Score=95.13 Aligned_cols=85 Identities=39% Similarity=0.589 Sum_probs=68.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEE-cCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
|.+++++|||++++||.+++++|+++|++|++. .| ..+..+.+.+++.. ....+.+|+++++++.++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYAR---------SRKAAEETAEEIEALGRKALAVKANVGDVEKIKEM 72 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 467899999999999999999999999998764 44 33444444444433 234566899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|+|||||
T Consensus 73 ~~~~~~~~~~id~vi~~a 90 (250)
T PRK08063 73 FAQIDEEFGRLDVFVNNA 90 (250)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999999999999986
No 110
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.67 E-value=9.9e-16 Score=95.55 Aligned_cols=87 Identities=33% Similarity=0.415 Sum_probs=68.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
+..+++++|||+++|||.+++++|+++|++|+++.++ ..+..+.+..++.. ....+.+|++|.+++.++
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 77 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNR--------SRDEAEALAAEIRALGRRAVALQADLADEAEVRAL 77 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 4567899999999999999999999999999887552 23333444444332 234467899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 78 ~~~~~~~~~~iD~vi~~a 95 (258)
T PRK09134 78 VARASAALGPITLLVNNA 95 (258)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999988889999999997
No 111
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.2e-15 Score=94.49 Aligned_cols=87 Identities=36% Similarity=0.492 Sum_probs=68.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
++++++++|||+++|||.+++++|+++|++|++++|+. ....+.+...+.. ....+.+|+++++++.++
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~--------~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 74 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQK--------APRANKVVAEIEAAGGRASAVGADLTDEESVAAL 74 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc--------hHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 36789999999999999999999999999999887631 1223333333332 224467799999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 75 ~~~~~~~~~~~d~vi~~a 92 (248)
T PRK07806 75 MDTAREEFGGLDALVLNA 92 (248)
T ss_pred HHHHHHhCCCCcEEEECC
Confidence 999988889999999986
No 112
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.67 E-value=9.3e-16 Score=95.61 Aligned_cols=83 Identities=34% Similarity=0.386 Sum_probs=68.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~ 83 (100)
+|+++|||++++||.+++++|+++|++|++++| +....+...+.+.. ....+.+|+++.+++.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 72 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADI---------NSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALS 72 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHH
Confidence 688999999999999999999999999999987 33344444433332 2345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 73 ~~~~~~~~~id~vv~~a 89 (259)
T PRK12384 73 RGVDEIFGRVDLLVYNA 89 (259)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99999999999999997
No 113
>KOG1200|consensus
Probab=99.67 E-value=4.8e-16 Score=92.87 Aligned_cols=86 Identities=31% Similarity=0.460 Sum_probs=72.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc--CCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~ 83 (100)
+++.+.+++||+++|||+++++.|+++|++|++.++ +....+.....++.. -.-+.||+++..++...+
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl---------~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l 81 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADL---------DSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTL 81 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeec---------chhhHHHHHhhcCCCCccceeeeccCcHHHHHHHH
Confidence 346789999999999999999999999999999987 444555555566553 244678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
++..+.++++++|||||
T Consensus 82 ~e~~k~~g~psvlVncA 98 (256)
T KOG1200|consen 82 EEMEKSLGTPSVLVNCA 98 (256)
T ss_pred HHHHHhcCCCcEEEEcC
Confidence 99999999999999997
No 114
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.67 E-value=1.1e-15 Score=106.32 Aligned_cols=89 Identities=36% Similarity=0.469 Sum_probs=72.5
Q ss_pred CCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcc
Q psy9143 3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVV 77 (100)
Q Consensus 3 ~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~ 77 (100)
....+.+|+++|||+++|||.+++++|+++|++|+++++ +.+..+.....+.. ....+.+|+++.+
T Consensus 408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r---------~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~ 478 (676)
T TIGR02632 408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADL---------NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQ 478 (676)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC---------CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHH
Confidence 344567899999999999999999999999999999987 44444444444432 1234678999999
Q ss_pred cHHHHHHHHHHHcCCccEEEecC
Q psy9143 78 DGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 78 ~~~~~~~~~~~~~~~id~li~~A 100 (100)
++.++++++.+.++++|++||||
T Consensus 479 ~v~~a~~~i~~~~g~iDilV~nA 501 (676)
T TIGR02632 479 AVKAAFADVALAYGGVDIVVNNA 501 (676)
T ss_pred HHHHHHHHHHHhcCCCcEEEECC
Confidence 99999999999999999999997
No 115
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.3e-15 Score=94.02 Aligned_cols=84 Identities=32% Similarity=0.413 Sum_probs=69.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~ 84 (100)
++|+++|||++++||..++++|+++|++|++++| +.+..+.+.+.+.. ....+.+|+++.+++.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 75 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVAR---------SQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIA 75 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHH
Confidence 4689999999999999999999999999999987 44444444444433 23456789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
.+.++++++|++||||
T Consensus 76 ~~~~~~~~id~lv~~a 91 (241)
T PRK07454 76 ELLEQFGCPDVLINNA 91 (241)
T ss_pred HHHHHcCCCCEEEECC
Confidence 9999999999999986
No 116
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.3e-15 Score=93.70 Aligned_cols=86 Identities=27% Similarity=0.431 Sum_probs=70.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~ 83 (100)
.+++++++|||++|+||.+++++|+++|++|++++| +......+.+.+.. ....+.+|+++.+++..++
T Consensus 3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~ 73 (237)
T PRK07326 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITAR---------DQKELEEAAAELNNKGNVLGLAADVRDEADVQRAV 73 (237)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC---------CHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHH
Confidence 356799999999999999999999999999999877 44455555555442 3345677999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+.+.+.++++|++||||
T Consensus 74 ~~~~~~~~~~d~vi~~a 90 (237)
T PRK07326 74 DAIVAAFGGLDVLIANA 90 (237)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99988889999999986
No 117
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=1.3e-15 Score=94.03 Aligned_cols=85 Identities=32% Similarity=0.488 Sum_probs=69.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 83 (100)
+++++++|||++++||.+++++|+++|++|++++| +....+....++.. +...+.+|+++++++.+++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 75 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLAR---------TEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAI 75 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHH
Confidence 56789999999999999999999999999999987 33444444444433 2334577999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 76 ~~~~~~~~~id~vi~~a 92 (239)
T PRK07666 76 EQLKNELGSIDILINNA 92 (239)
T ss_pred HHHHHHcCCccEEEEcC
Confidence 99988999999999986
No 118
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.67 E-value=1.5e-15 Score=94.07 Aligned_cols=87 Identities=38% Similarity=0.658 Sum_probs=69.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
++++++++|||++++||.+++++|+++|++|++..++ .....++..+.+... ...+.+|+++.+.+.++
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 74 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS--------SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRL 74 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC--------cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 3568999999999999999999999999998876541 233444444444332 34567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 75 ~~~~~~~~~~id~vi~~a 92 (247)
T PRK12935 75 VEEAVNHFGKVDILVNNA 92 (247)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999999999999997
No 119
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.2e-15 Score=95.38 Aligned_cols=85 Identities=26% Similarity=0.444 Sum_probs=68.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH--hcCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~ 83 (100)
.+++++++||||+++||.+++++|+++|++|++++| +.+..+.+..++. .....+.+|+++.+++.+++
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 72 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGR---------NAEKLEALAARLPYPGRHRWVVADLTSEAGREAVL 72 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 467899999999999999999999999999999987 4444555544431 23345678999999999998
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+.+.+ ++++|++||||
T Consensus 73 ~~~~~-~~~id~lv~~a 88 (263)
T PRK09072 73 ARARE-MGGINVLINNA 88 (263)
T ss_pred HHHHh-cCCCCEEEECC
Confidence 88765 78999999986
No 120
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1e-15 Score=96.33 Aligned_cols=83 Identities=28% Similarity=0.364 Sum_probs=68.8
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
.++++|||++++||.+++++|+++|++|+++.| +.+..+.+..........+.+|+++.+.+.++++++.+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVR---------RPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA 72 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999999876 44445444443333445668899999999999999888
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
.++++|+|||||
T Consensus 73 ~~~~id~vi~~a 84 (276)
T PRK06482 73 ALGRIDVVVSNA 84 (276)
T ss_pred HcCCCCEEEECC
Confidence 889999999996
No 121
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.66 E-value=2.7e-15 Score=92.71 Aligned_cols=87 Identities=40% Similarity=0.562 Sum_probs=69.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
++++++++|||++++||.+++++|+++|++++++.++ .....+.+.+.+.. +...+.+|+++.+++.++
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 73 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG--------SAAAADELVAEIEAAGGRAIAVQADVADAAAVTRL 73 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC--------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 4578999999999999999999999999998887652 22333333333332 234567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 74 ~~~~~~~~~~id~vi~~a 91 (245)
T PRK12937 74 FDAAETAFGRIDVLVNNA 91 (245)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999999999999997
No 122
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.66 E-value=1.1e-15 Score=94.26 Aligned_cols=81 Identities=20% Similarity=0.252 Sum_probs=64.9
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
+|+++|||+++|||.+++++|+++|++|++++|+.. ...+.+ .. .....+.+|+++.++++++++++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~--------~~~~~~-~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 70 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY--------PAIDGL-RQ--AGAQCIQADFSTNAGIMAFIDELKQ 70 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch--------hHHHHH-HH--cCCEEEEcCCCCHHHHHHHHHHHHh
Confidence 578999999999999999999999999999987321 111111 11 1234567899999999999999999
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
.++++|++||||
T Consensus 71 ~~~~id~lv~~a 82 (236)
T PRK06483 71 HTDGLRAIIHNA 82 (236)
T ss_pred hCCCccEEEECC
Confidence 999999999997
No 123
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.66 E-value=1.8e-15 Score=93.63 Aligned_cols=86 Identities=35% Similarity=0.553 Sum_probs=70.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
++++++++|||+++++|.+++++|+++|++|++++| +.+........+... ...+.+|+.+.+++.++
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~ 73 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDI---------CGDDAAATAELVEAAGGKARARQVDVRDRAALKAA 73 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 356889999999999999999999999999999987 334444444444433 33456799999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 74 ~~~~~~~~~~~d~vi~~a 91 (251)
T PRK12826 74 VAAGVEDFGRLDILVANA 91 (251)
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 999999999999999986
No 124
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.66 E-value=2.7e-15 Score=92.83 Aligned_cols=86 Identities=23% Similarity=0.272 Sum_probs=66.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~ 83 (100)
|++|+++|||+++|||.+++++|+++|++|++..++ .........+++.... ....+|+++.+++.+++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGP--------NSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAF 72 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC--------ChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 467999999999999999999999999998875431 2222233333333322 23468999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 73 ~~~~~~~~~id~li~~a 89 (246)
T PRK12938 73 DKVKAEVGEIDVLVNNA 89 (246)
T ss_pred HHHHHHhCCCCEEEECC
Confidence 99999999999999997
No 125
>PRK12743 oxidoreductase; Provisional
Probab=99.66 E-value=2.9e-15 Score=93.42 Aligned_cols=84 Identities=31% Similarity=0.550 Sum_probs=68.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~ 85 (100)
+|+++||||++|||.+++++|+++|++|+++.++ .....+.+.+++.. ....+.+|+++.+++++++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHS--------DEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDK 73 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC--------ChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 5789999999999999999999999999887542 33444444444433 234567899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~id~li~~a 88 (256)
T PRK12743 74 LIQRLGRIDVLVNNA 88 (256)
T ss_pred HHHHcCCCCEEEECC
Confidence 999999999999986
No 126
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.66 E-value=2.3e-15 Score=93.22 Aligned_cols=86 Identities=29% Similarity=0.458 Sum_probs=70.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
++++++++|||++++||.++++.|+++|++|+++++ .....+...+++.. +...+.+|+++.+++.++
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL---------NQEKLEEAVAECGALGTEVRGYAANVTDEEDVEAT 72 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 367899999999999999999999999999999876 44444454444443 233467899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++.+.+.++++|++||||
T Consensus 73 ~~~~~~~~~~id~vi~~a 90 (253)
T PRK08217 73 FAQIAEDFGQLNGLINNA 90 (253)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999888889999999986
No 127
>PRK09135 pteridine reductase; Provisional
Probab=99.65 E-value=2.7e-15 Score=92.70 Aligned_cols=86 Identities=27% Similarity=0.386 Sum_probs=68.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----cCCceeeeccCcccHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~ 82 (100)
+++++++|||++++||++++++|+++|++|++++|+ ..+..+.+...+.. ....+.+|+++.+++.++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 75 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR--------SAAEADALAAELNALRPGSAAALQADLLDPDALPEL 75 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHH
Confidence 467899999999999999999999999999998863 22333333333332 233467799999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++.+.+.++++|++||||
T Consensus 76 ~~~~~~~~~~~d~vi~~a 93 (249)
T PRK09135 76 VAACVAAFGRLDALVNNA 93 (249)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999999999999997
No 128
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.65 E-value=3.7e-15 Score=93.11 Aligned_cols=87 Identities=33% Similarity=0.546 Sum_probs=69.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
.+++|+++|||+++|||.+++++|+++|+++++..++ ..+......+++... ...+.+|+++.+++.++
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~ 75 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS--------DEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNL 75 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHH
Confidence 3678999999999999999999999999998887652 223333444444332 23467899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++.+.+.++++|++||||
T Consensus 76 ~~~~~~~~g~id~lv~~a 93 (261)
T PRK08936 76 IQTAVKEFGTLDVMINNA 93 (261)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999999999999997
No 129
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1e-15 Score=96.01 Aligned_cols=79 Identities=30% Similarity=0.357 Sum_probs=66.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
++++++||||+||||.+++++|+++|++|++++|+. ...+. ......+.+|++|.++++++++.+.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~---------~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~ 68 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP---------ARAAP-----IPGVELLELDVTDDASVQAAVDEVI 68 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCh---------hhccc-----cCCCeeEEeecCCHHHHHHHHHHHH
Confidence 468899999999999999999999999999998732 11111 1234567889999999999999999
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
+.++++|+|||||
T Consensus 69 ~~~g~~d~li~~a 81 (270)
T PRK06179 69 ARAGRIDVLVNNA 81 (270)
T ss_pred HhCCCCCEEEECC
Confidence 9999999999997
No 130
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.8e-15 Score=94.37 Aligned_cols=82 Identities=28% Similarity=0.398 Sum_probs=67.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH-hcCCceeeeccCcccHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
|+++||||++|||.+++++|+++|++|++++| +.+..+.+...+. .....+.+|+++.+++.+++..+.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 72 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDI---------NEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAA 72 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 68999999999999999999999999999977 4455555544443 2345668899999999999988877
Q ss_pred H-cCCccEEEecC
Q psy9143 89 N-FGRIDIVINNA 100 (100)
Q Consensus 89 ~-~~~id~li~~A 100 (100)
. .+++|+|||||
T Consensus 73 ~~~~~id~vi~~a 85 (260)
T PRK08267 73 ATGGRLDVLFNNA 85 (260)
T ss_pred HcCCCCCEEEECC
Confidence 6 78999999997
No 131
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.7e-15 Score=91.57 Aligned_cols=86 Identities=28% Similarity=0.389 Sum_probs=69.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-cCCceeeeccCcccHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~ 84 (100)
++++++++|||++++||.+++++|+++|++|++++|+ .....+...++.. ......+|+.+.+++.++++
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRG---------AAPLSQTLPGVPADALRIGGIDLVDPQAARRAVD 74 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCC---------hHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHH
Confidence 4678999999999999999999999999999999873 3333333333322 33455689999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.+.++++|++||+|
T Consensus 75 ~~~~~~~~~d~vi~~a 90 (239)
T PRK12828 75 EVNRQFGRLDALVNIA 90 (239)
T ss_pred HHHHHhCCcCEEEECC
Confidence 9999999999999986
No 132
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.65 E-value=2.7e-15 Score=92.92 Aligned_cols=85 Identities=36% Similarity=0.527 Sum_probs=69.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 83 (100)
+++++++|||++++||.+++++|+++|++|+++++ +....+.+...+.. ....+.+|+++.+++++++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 71 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL---------NREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAV 71 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 46799999999999999999999999999999876 33444444444332 3345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+.+.+.++++|++||||
T Consensus 72 ~~~~~~~~~~d~vi~~a 88 (250)
T TIGR03206 72 AAAEQALGPVDVLVNNA 88 (250)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99988899999999986
No 133
>PRK05855 short chain dehydrogenase; Validated
Probab=99.64 E-value=2.6e-15 Score=102.17 Aligned_cols=86 Identities=36% Similarity=0.529 Sum_probs=72.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~ 82 (100)
.+.+++++||||++|||.+++++|+++|++|++++| +....+++.+.+...+ ..+.+|+++.+.+.++
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 382 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDI---------DEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAF 382 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 456789999999999999999999999999999987 4455555555554332 4567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 383 ~~~~~~~~g~id~lv~~A 400 (582)
T PRK05855 383 AEWVRAEHGVPDIVVNNA 400 (582)
T ss_pred HHHHHHhcCCCcEEEECC
Confidence 999999999999999997
No 134
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.6e-15 Score=94.55 Aligned_cols=83 Identities=28% Similarity=0.402 Sum_probs=66.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~ 82 (100)
++++++||||+++||.++++.|+++|++|++++| ..+..+.+...... ....+.+|+++++++++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~- 71 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMR---------NPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN- 71 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-
Confidence 5789999999999999999999999999999877 33444444333322 23456789999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 72 ~~~~~~~~~~id~vv~~a 89 (280)
T PRK06914 72 FQLVLKEIGRIDLLVNNA 89 (280)
T ss_pred HHHHHHhcCCeeEEEECC
Confidence 888888889999999996
No 135
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.64 E-value=2.7e-15 Score=93.18 Aligned_cols=81 Identities=21% Similarity=0.323 Sum_probs=67.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
+++|||+++|||.++++.|+++|++|++++| +.+.++.+...+......+.+|+++.+++.++++++.+.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 72 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGR---------RQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEW 72 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999999999987 4445555544444444567889999999999999998889
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
+++|++||||
T Consensus 73 ~~id~vi~~a 82 (248)
T PRK10538 73 RNIDVLVNNA 82 (248)
T ss_pred CCCCEEEECC
Confidence 9999999986
No 136
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.64 E-value=7.3e-15 Score=91.70 Aligned_cols=95 Identities=22% Similarity=0.293 Sum_probs=70.0
Q ss_pred CCCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCC--CCCChHHHHHHHHHHHhc---CCceeeeccCccc
Q psy9143 6 RFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDG--DGKSSKAADTVVAEIRSK---GGKAVPDYNSVVD 78 (100)
Q Consensus 6 ~~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~ 78 (100)
.+++|+++|||++ +|||.+++++|+++|++|+++++...... .........++.+++... ...+.+|+++.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 4679999999998 49999999999999999998754211110 011223333444444432 2345789999999
Q ss_pred HHHHHHHHHHHcCCccEEEecC
Q psy9143 79 GDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 79 ~~~~~~~~~~~~~~id~li~~A 100 (100)
+.++++++.+.++++|++||||
T Consensus 83 i~~~~~~~~~~~g~id~li~~a 104 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNA 104 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECC
Confidence 9999999999999999999997
No 137
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.1e-15 Score=95.83 Aligned_cols=87 Identities=29% Similarity=0.496 Sum_probs=68.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
.+++++++|||+++|||.+++++|+++|++|++++++. ....+.....+.. ....+.+|+++.+++.++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 114 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDE--------HEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDA 114 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--------chHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 46789999999999999999999999999999987731 1222333333332 233567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 115 ~~~i~~~~~~iD~lI~~A 132 (290)
T PRK06701 115 VEETVRELGRLDILVNNA 132 (290)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999999899999999997
No 138
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.8e-15 Score=94.53 Aligned_cols=81 Identities=25% Similarity=0.270 Sum_probs=65.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
++++++||||++|||.+++++|+++|++|++++| +.+.++.+.. .....+.+|++|.++++++++++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r---------~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~ 70 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCR---------KEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVL 70 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHH
Confidence 3689999999999999999999999999999987 3444433322 234456789999999999999887
Q ss_pred HHc-CCccEEEecC
Q psy9143 88 ENF-GRIDIVINNA 100 (100)
Q Consensus 88 ~~~-~~id~li~~A 100 (100)
+.+ +++|++||||
T Consensus 71 ~~~~g~id~li~~A 84 (277)
T PRK05993 71 ELSGGRLDALFNNG 84 (277)
T ss_pred HHcCCCccEEEECC
Confidence 765 6899999996
No 139
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.64 E-value=4.3e-15 Score=91.52 Aligned_cols=86 Identities=40% Similarity=0.628 Sum_probs=69.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
+|++++++|||++++||.+++++|+++|+.|++++| +....+.....+.. ....+.+|+++++++.++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDS---------NEEAAEALAAELRAAGGEARVLVFDVSDEAAVRAL 72 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------ChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 456789999999999999999999999999998877 33444444444432 234556899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||+|
T Consensus 73 ~~~~~~~~~~id~vi~~a 90 (246)
T PRK05653 73 IEAAVEAFGALDILVNNA 90 (246)
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 999888889999999986
No 140
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.64 E-value=4.4e-15 Score=91.69 Aligned_cols=86 Identities=43% Similarity=0.687 Sum_probs=68.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEE-cCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~ 81 (100)
++++++++|||++++||.+++++|+++|++++++ .| +....+.+.+.+.. ....+.+|+++++++.+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDI---------NEEAAQELLEEIKEEGGDAIAVKADVSSEEDVEN 72 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 3567899999999999999999999999999888 66 33444444444433 23345679999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++.+.+.++++|++||||
T Consensus 73 ~~~~~~~~~~~id~vi~~a 91 (247)
T PRK05565 73 LVEQIVEKFGKIDILVNNA 91 (247)
T ss_pred HHHHHHHHhCCCCEEEECC
Confidence 9999888889999999986
No 141
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.7e-15 Score=92.85 Aligned_cols=82 Identities=29% Similarity=0.422 Sum_probs=66.8
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC----CceeeeccCcccHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG----GKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~ 85 (100)
++++||||++|||.+++++|+++|++|++++| +.+..+...+++.... ....+|+++++++.+++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDR---------DADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence 46999999999999999999999999998876 4444555544444322 2357899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 72 ~~~~~~~id~lv~~a 86 (272)
T PRK07832 72 IHAAHGSMDVVMNIA 86 (272)
T ss_pred HHHhcCCCCEEEECC
Confidence 988899999999996
No 142
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7e-15 Score=91.65 Aligned_cols=87 Identities=37% Similarity=0.553 Sum_probs=68.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCe-EEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGD 80 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 80 (100)
..+++|+++|||++++||..++++|+++|++ |++++| ..+........+... ...+.+|+++++.+.
T Consensus 2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 72 (260)
T PRK06198 2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGR---------NAEKGEAQAAELEALGAKAVFVQADLSDVEDCR 72 (260)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcC---------CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence 3467899999999999999999999999998 888876 333333333333222 234567999999999
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++.+.+.++++|++||||
T Consensus 73 ~~~~~~~~~~g~id~li~~a 92 (260)
T PRK06198 73 RVVAAADEAFGRLDALVNAA 92 (260)
T ss_pred HHHHHHHHHhCCCCEEEECC
Confidence 99999988889999999986
No 143
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.63 E-value=4.2e-15 Score=93.26 Aligned_cols=83 Identities=33% Similarity=0.483 Sum_probs=63.2
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----cCCceeeeccCcccH----HH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPDYNSVVDG----DK 81 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~----~~ 81 (100)
++++||||++|||++++++|+++|++|+++.++ ..+.++.+.+++.. ....+.+|++|.+.+ ++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~ 73 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR--------SAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEA 73 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC--------cHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHH
Confidence 579999999999999999999999999987642 33445555555532 223467899998865 45
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++.+.+.++++|+|||||
T Consensus 74 ~~~~~~~~~g~iD~lv~nA 92 (267)
T TIGR02685 74 IIDACFRAFGRCDVLVNNA 92 (267)
T ss_pred HHHHHHHccCCceEEEECC
Confidence 5666667789999999997
No 144
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=8.6e-15 Score=90.76 Aligned_cols=88 Identities=27% Similarity=0.522 Sum_probs=67.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~ 81 (100)
+++++++++|||++++||.+++++|+++|+++++..++ ...........+.. ....+.+|+++++++.+
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 73 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKK--------RAEEMNETLKMVKENGGEGIGVLADVSTREGCET 73 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC--------ChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHH
Confidence 34678999999999999999999999999998776542 22222232233332 22356789999999999
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++++.+.++++|++||||
T Consensus 74 ~~~~~~~~~~~~d~vi~~a 92 (252)
T PRK06077 74 LAKATIDRYGVADILVNNA 92 (252)
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 9999999999999999997
No 145
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.8e-15 Score=91.41 Aligned_cols=84 Identities=37% Similarity=0.530 Sum_probs=67.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~ 85 (100)
+++++|||++++||.+++++|+++|++|+++.++ +....+.....+.. ....+.+|+++.+++.+++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLR--------NRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEA 73 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCC--------CHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHH
Confidence 5789999999999999999999999998877542 23333344444432 234567899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~id~li~~a 88 (248)
T PRK06123 74 VDRELGRLDALVNNA 88 (248)
T ss_pred HHHHhCCCCEEEECC
Confidence 999999999999997
No 146
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.63 E-value=3.3e-15 Score=92.32 Aligned_cols=90 Identities=34% Similarity=0.532 Sum_probs=70.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
.+++++++|||++++||.++++.|+++|++|+++++... +..+..+.+..++... ...+.+|+++.+.+.++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPM-----RGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccc-----ccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 356789999999999999999999999999998776322 1334444444444332 34567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++.+.+.++++|++||||
T Consensus 78 ~~~~~~~~~~~d~vi~~a 95 (249)
T PRK12827 78 LDAGVEEFGRLDILVNNA 95 (249)
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 999988889999999996
No 147
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7e-15 Score=92.61 Aligned_cols=85 Identities=27% Similarity=0.376 Sum_probs=67.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 83 (100)
+.+++++|||++++||.+++++|+++|++|++++| +..........+.. ....+.+|+++.+++.+++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGAR---------RVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFV 78 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 45689999999999999999999999999988876 33333344333332 2234567999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 79 ~~~~~~~~~id~vi~~A 95 (274)
T PRK07775 79 AQAEEALGEIEVLVSGA 95 (274)
T ss_pred HHHHHhcCCCCEEEECC
Confidence 99988889999999997
No 148
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.3e-15 Score=92.24 Aligned_cols=86 Identities=36% Similarity=0.544 Sum_probs=69.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-cCCceeeeccCcccHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~ 84 (100)
.+++++++|||++++||..++++|+++|++|++++| +.+..+.+.+.... +...+.+|+++++++..+++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDV---------SEAALAATAARLPGAKVTATVADVADPAQVERVFD 78 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHH
Confidence 367899999999999999999999999999999887 33344444333322 22456789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.+.++++|+|||||
T Consensus 79 ~~~~~~~~~d~vi~~a 94 (264)
T PRK12829 79 TAVERFGGLDVLVNNA 94 (264)
T ss_pred HHHHHhCCCCEEEECC
Confidence 9988889999999986
No 149
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.63 E-value=1.1e-14 Score=89.91 Aligned_cols=86 Identities=26% Similarity=0.294 Sum_probs=67.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----cCCceeeeccC--cccH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPDYNS--VVDG 79 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~--~~~~ 79 (100)
.|++++++|||+++|||.+++++|+++|++|++++| +....+.+.+++.. ....+.+|+++ .+++
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~ 73 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVAR---------HQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEF 73 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC---------ChHHHHHHHHHHHHcCCCCcceEEeeecccchHHH
Confidence 367899999999999999999999999999999987 44445555555432 22345678875 3467
Q ss_pred HHHHHHHHHHc-CCccEEEecC
Q psy9143 80 DKIVQTALENF-GRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~-~~id~li~~A 100 (100)
.++++++.+.+ +++|++||||
T Consensus 74 ~~~~~~i~~~~~~~id~vi~~a 95 (239)
T PRK08703 74 EQFAATIAEATQGKLDGIVHCA 95 (239)
T ss_pred HHHHHHHHHHhCCCCCEEEEec
Confidence 88888888877 7899999997
No 150
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.63 E-value=3.3e-15 Score=103.39 Aligned_cols=86 Identities=36% Similarity=0.548 Sum_probs=72.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 82 (100)
.+++++++||||++|||.+++++|+++|++|++++| +.+.++++.+++... ...+.+|+++.++++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 438 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVAR---------NGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHT 438 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 467899999999999999999999999999999987 455555555555432 34567899999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 439 ~~~~~~~~g~id~li~~A 456 (657)
T PRK07201 439 VKDILAEHGHVDYLVNNA 456 (657)
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 999999999999999997
No 151
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.63 E-value=4.8e-15 Score=93.22 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=65.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
|+++||||++|||.+++++|+++|++|++++| +....+.+. ......+.+|+++.+++.++++.+.+.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 69 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATAR---------KAEDVEALA---AAGFTAVQLDVNDGAALARLAEELEAE 69 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHH---HCCCeEEEeeCCCHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999877 333333322 122445678999999999999999888
Q ss_pred cCCccEEEecC
Q psy9143 90 FGRIDIVINNA 100 (100)
Q Consensus 90 ~~~id~li~~A 100 (100)
++++|++||||
T Consensus 70 ~~~id~vi~~a 80 (274)
T PRK05693 70 HGGLDVLINNA 80 (274)
T ss_pred cCCCCEEEECC
Confidence 99999999997
No 152
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7.3e-15 Score=91.31 Aligned_cols=85 Identities=41% Similarity=0.588 Sum_probs=66.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEE-cCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
+++++++|||++++||.+++++|+++|+.|+++ .| ..+..+.....+.. ....+.+|++|.+++.++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~ 74 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGR---------NKQAADETIREIESNGGKAFLIEADLNSIDGVKKL 74 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHH
Confidence 567999999999999999999999999998775 33 33444444444432 233567899999999999
Q ss_pred HHHHHHHc------CCccEEEecC
Q psy9143 83 VQTALENF------GRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~------~~id~li~~A 100 (100)
++++.+.+ +++|++||||
T Consensus 75 ~~~~~~~~~~~~~~~~id~vi~~a 98 (254)
T PRK12746 75 VEQLKNELQIRVGTSEIDILVNNA 98 (254)
T ss_pred HHHHHHHhccccCCCCccEEEECC
Confidence 99988776 4799999987
No 153
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.3e-15 Score=92.84 Aligned_cols=82 Identities=28% Similarity=0.446 Sum_probs=67.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
++++|||+++|||++++++|+++|++|++++| ..+..+....++.. ....+.+|+++.+++.++++.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i 71 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADV---------NEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQAC 71 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 46899999999999999999999999999876 44445555444433 2345678999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.+.++++|+|||||
T Consensus 72 ~~~~~~id~lI~~a 85 (270)
T PRK05650 72 EEKWGGIDVIVNNA 85 (270)
T ss_pred HHHcCCCCEEEECC
Confidence 88899999999996
No 154
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=6.3e-15 Score=91.63 Aligned_cols=84 Identities=29% Similarity=0.390 Sum_probs=67.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.|+++|||++++||.+++++|+++|++|++++|+ .........+.+.. +...+.+|+++.+++.+++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRP--------DDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDA 73 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecC--------chhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4789999999999999999999999999998863 12222333333332 334567899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~id~vi~~a 88 (256)
T PRK12745 74 AQAAWGRIDCLVNNA 88 (256)
T ss_pred HHHhcCCCCEEEECC
Confidence 999999999999996
No 155
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.62 E-value=3.9e-15 Score=92.78 Aligned_cols=95 Identities=24% Similarity=0.315 Sum_probs=68.8
Q ss_pred CCCCCEEEEecCCC--chhHHHHHHHHHcCCeEEEEcCCCCCCCC--CCChHHHHHHHHHHHh---cCCceeeeccCccc
Q psy9143 6 RFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGD--GKSSKAADTVVAEIRS---KGGKAVPDYNSVVD 78 (100)
Q Consensus 6 ~~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~ 78 (100)
++++++++|||+++ |||.+++++|+++|++|++++|+..+... .........+...+.. ....+.+|+++.++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 46789999999994 89999999999999999999874211100 0001111113333322 33456789999999
Q ss_pred HHHHHHHHHHHcCCccEEEecC
Q psy9143 79 GDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 79 ~~~~~~~~~~~~~~id~li~~A 100 (100)
+..+++++.+.++++|++||||
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~a 103 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNA 103 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECC
Confidence 9999999999999999999997
No 156
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.62 E-value=7.9e-15 Score=90.86 Aligned_cols=84 Identities=32% Similarity=0.481 Sum_probs=66.5
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.|+++|||+++|||.+++++|+++|++|+++.++ ..+..+.....+.. +...+.+|+++.+++..++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYAR--------DAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDA 73 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHH
Confidence 4789999999999999999999999998876531 33334444333332 344667899999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 74 ~~~~~~~id~li~~a 88 (248)
T PRK06947 74 VQSAFGRLDALVNNA 88 (248)
T ss_pred HHHhcCCCCEEEECC
Confidence 988889999999997
No 157
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.62 E-value=6.3e-15 Score=91.52 Aligned_cols=82 Identities=33% Similarity=0.451 Sum_probs=67.6
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~ 86 (100)
|+++|||++++||.+++++|++.|++|+++++ +....+.+.+++... ...+.+|+++++++.+++.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 71 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADL---------NEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQA 71 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 57999999999999999999999999999876 344444444444432 344567999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.+.++++|++||||
T Consensus 72 ~~~~~~id~vi~~a 85 (254)
T TIGR02415 72 AEKFGGFDVMVNNA 85 (254)
T ss_pred HHHcCCCCEEEECC
Confidence 99999999999996
No 158
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.62 E-value=6.8e-15 Score=91.28 Aligned_cols=88 Identities=40% Similarity=0.618 Sum_probs=67.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH----hcCCceeeeccC-cccHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR----SKGGKAVPDYNS-VVDGD 80 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~-~~~~~ 80 (100)
++.+++++|||+++|||+++++.|++.|+++++..++.. ....+....... .......+|+++ .+.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~ 74 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSE-------EEAAEALAAAIKEAGGGRAAAVAADVSDDEESVE 74 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc-------hhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHH
Confidence 457899999999999999999999999999887766321 102333333333 233345589998 88899
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
.+++.+.+.+|++|++||||
T Consensus 75 ~~~~~~~~~~g~id~lvnnA 94 (251)
T COG1028 75 ALVAAAEEEFGRIDILVNNA 94 (251)
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 99999999999999999997
No 159
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.62 E-value=6.2e-15 Score=92.03 Aligned_cols=84 Identities=18% Similarity=0.217 Sum_probs=65.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcC-CeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----cCCceeeeccCcccHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~ 82 (100)
.+++++||||++|||++++++|+++| ++|++++|+. ...++.+.+++.. ....+.+|++|.+++.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~--------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~ 78 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPD--------DPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKV 78 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCc--------chhHHHHHHHHHhcCCCceEEEEecCCChHHHHHH
Confidence 46889999999999999999999995 8999998732 1124444444443 234567899999999998
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+ .+++|++|||+
T Consensus 79 ~~~~~~-~g~id~li~~a 95 (253)
T PRK07904 79 IDAAFA-GGDVDVAIVAF 95 (253)
T ss_pred HHHHHh-cCCCCEEEEee
Confidence 888876 48999999985
No 160
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.62 E-value=6.8e-15 Score=92.82 Aligned_cols=80 Identities=21% Similarity=0.348 Sum_probs=63.9
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~ 85 (100)
+|+++|||+ +|||++++++|+ +|++|++++| ....+++..+++... ...+.+|+++.+++.+++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~ 70 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADY---------NEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAAT 70 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH
Confidence 588999998 699999999996 8999999987 344445554454432 23467899999999999988
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+ ++++++|+|||||
T Consensus 71 ~-~~~g~id~li~nA 84 (275)
T PRK06940 71 A-QTLGPVTGLVHTA 84 (275)
T ss_pred H-HhcCCCCEEEECC
Confidence 7 5688999999997
No 161
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.62 E-value=4.6e-15 Score=92.05 Aligned_cols=81 Identities=28% Similarity=0.396 Sum_probs=67.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+++++++++|||++++||.+++++|+++|++|++++++ . ..........+.+|+++.+++.++++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~---------~------~~~~~~~~~~~~~D~~~~~~~~~~~~ 68 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA---------F------LTQEDYPFATFVLDVSDAAAVAQVCQ 68 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc---------h------hhhcCCceEEEEecCCCHHHHHHHHH
Confidence 55788999999999999999999999999999999762 1 11112234457789999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.+.++++|++||||
T Consensus 69 ~~~~~~~~id~vi~~a 84 (252)
T PRK08220 69 RLLAETGPLDVLVNAA 84 (252)
T ss_pred HHHHHcCCCCEEEECC
Confidence 9999999999999996
No 162
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.61 E-value=1.4e-14 Score=89.40 Aligned_cols=87 Identities=40% Similarity=0.585 Sum_probs=67.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~ 82 (100)
++.+++++|||++++||.+++++|+++|++|+++.++ ..+..+....++.. ....+.+|+++.+++.++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 73 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS--------SEAGAEALVAEIGALGGKALAVQGDVSDAESVERA 73 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC--------chhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4577899999999999999999999999999777652 22223333333332 234456799999999999
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++++.+.++++|++||||
T Consensus 74 ~~~~~~~~~~id~vi~~a 91 (248)
T PRK05557 74 VDEAKAEFGGVDILVNNA 91 (248)
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 999988889999999986
No 163
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.61 E-value=1.7e-14 Score=89.46 Aligned_cols=86 Identities=33% Similarity=0.473 Sum_probs=68.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc----CCceeeecc--CcccH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----GGKAVPDYN--SVVDG 79 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~--~~~~~ 79 (100)
.+++++++|||++++||.+++++|++.|++|++++| +.+..+.+..++... ...+.+|+. +.+++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~ 79 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGR---------TEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNY 79 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeC---------CHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHH
Confidence 357899999999999999999999999999999987 444445555554432 234456765 66788
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
.++++.+.+.++++|+|||||
T Consensus 80 ~~~~~~~~~~~~~id~vi~~A 100 (247)
T PRK08945 80 QQLADTIEEQFGRLDGVLHNA 100 (247)
T ss_pred HHHHHHHHHHhCCCCEEEECC
Confidence 899999988889999999997
No 164
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.2e-14 Score=90.59 Aligned_cols=83 Identities=23% Similarity=0.330 Sum_probs=67.9
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-cCCceeeeccCcccHHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
+++++|||++++||.+++++|+++|++|++++| +....+.+...+.. ....+.+|+.+.+++.++++++.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDI---------DAAALAAFADALGDARFVPVACDLTDAASLAAALANAA 72 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999887 44444444444322 23456789999999999999998
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
++++++|++||||
T Consensus 73 ~~~~~~d~vi~~a 85 (257)
T PRK07074 73 AERGPVDVLVANA 85 (257)
T ss_pred HHcCCCCEEEECC
Confidence 8899999999986
No 165
>KOG1199|consensus
Probab=99.60 E-value=3.4e-15 Score=87.97 Aligned_cols=87 Identities=36% Similarity=0.434 Sum_probs=74.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
-+.++-+.++||+.+|+|.+.+++|+.+|+.+++.+. ..++-....+++..+..+...|++++.++..++.
T Consensus 5 rs~kglvalvtggasglg~ataerlakqgasv~lldl---------p~skg~~vakelg~~~vf~padvtsekdv~aala 75 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDL---------PQSKGADVAKELGGKVVFTPADVTSEKDVRAALA 75 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeC---------CcccchHHHHHhCCceEEeccccCcHHHHHHHHH
Confidence 3457888999999999999999999999999999986 2333345566777777778889999999999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
....++|++|.+||||
T Consensus 76 ~ak~kfgrld~~vnca 91 (260)
T KOG1199|consen 76 KAKAKFGRLDALVNCA 91 (260)
T ss_pred HHHhhccceeeeeecc
Confidence 9999999999999997
No 166
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.6e-14 Score=89.25 Aligned_cols=85 Identities=31% Similarity=0.396 Sum_probs=65.4
Q ss_pred CCCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHH
Q psy9143 1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGD 80 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 80 (100)
|+..+++++++++|||++++||.++++.|+++|++|++++| +.+..+.+.... ....+.+|+++.+++.
T Consensus 1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r---------~~~~~~~~~~~~--~~~~~~~D~~~~~~v~ 69 (245)
T PRK07060 1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAAR---------NAAALDRLAGET--GCEPLRLDVGDDAAIR 69 (245)
T ss_pred CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHh--CCeEEEecCCCHHHHH
Confidence 67777888999999999999999999999999999999876 444444443322 2335567888877666
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++. .+++|++||||
T Consensus 70 ~~~~~----~~~~d~vi~~a 85 (245)
T PRK07060 70 AALAA----AGAFDGLVNCA 85 (245)
T ss_pred HHHHH----hCCCCEEEECC
Confidence 65543 57899999986
No 167
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.60 E-value=1.9e-14 Score=88.63 Aligned_cols=86 Identities=20% Similarity=0.318 Sum_probs=69.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~ 83 (100)
++++++++|||++++||.++++.|+++|++|++++| +....+.+...+.. ....+.+|+++.+++.+++
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 72 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR---------NENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVI 72 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHH
Confidence 357899999999999999999999999999999987 44444444344333 2345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++...++++|.+|+|+
T Consensus 73 ~~~~~~~~~id~ii~~a 89 (238)
T PRK05786 73 EKAAKVLNAIDGLVVTV 89 (238)
T ss_pred HHHHHHhCCCCEEEEcC
Confidence 98888888999999885
No 168
>PRK08324 short chain dehydrogenase; Validated
Probab=99.60 E-value=1.3e-14 Score=101.11 Aligned_cols=86 Identities=36% Similarity=0.518 Sum_probs=71.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~ 83 (100)
.+.+++++|||++||||.+++++|+++|++|++++| +....+.....+.. ....+.+|+++.+++.+++
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r---------~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~ 489 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADL---------DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAF 489 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeC---------CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHH
Confidence 457899999999999999999999999999999987 44555555544443 3345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||||
T Consensus 490 ~~~~~~~g~iDvvI~~A 506 (681)
T PRK08324 490 EEAALAFGGVDIVVSNA 506 (681)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99988999999999997
No 169
>PLN00015 protochlorophyllide reductase
Probab=99.60 E-value=6e-15 Score=94.41 Aligned_cols=79 Identities=27% Similarity=0.226 Sum_probs=64.4
Q ss_pred EEecCCCchhHHHHHHHHHcC-CeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHHHHH
Q psy9143 13 IVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 13 litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
+|||+++|||++++++|+++| ++|++++| +.+..+....++.. ....+.+|+++.++++++++++.+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 71 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACR---------DFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRR 71 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeC---------CHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence 589999999999999999999 99999876 44445555544432 223457899999999999999988
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
.++++|+|||||
T Consensus 72 ~~~~iD~lInnA 83 (308)
T PLN00015 72 SGRPLDVLVCNA 83 (308)
T ss_pred cCCCCCEEEECC
Confidence 888999999997
No 170
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.59 E-value=2.2e-14 Score=89.51 Aligned_cols=82 Identities=26% Similarity=0.431 Sum_probs=63.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----cCCceeeeccCcccHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~ 81 (100)
.+++++++|||+++|||.++++.|+++|++|++++| +.+..+...+++.. ....+.+|+++.+++..
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~ 74 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVAR---------DADALEALAADLRAAHGVDVAVHALDLSSPEAREQ 74 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHH
Confidence 467899999999999999999999999999999987 44444454444433 23455679998888777
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
+++ .++++|++||||
T Consensus 75 ~~~----~~g~id~lv~~a 89 (259)
T PRK06125 75 LAA----EAGDIDILVNNA 89 (259)
T ss_pred HHH----HhCCCCEEEECC
Confidence 664 357999999996
No 171
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.59 E-value=1.8e-14 Score=92.83 Aligned_cols=82 Identities=30% Similarity=0.455 Sum_probs=61.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC-----CceeeeccCcccHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPDYNSVVDGDKI 82 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~ 82 (100)
.|++++||||++|||.+++++|+++|++|++++| +.+.++++.+++.... ..+.+|+++ ++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R---------~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~ 120 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVAR---------NPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEG 120 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEEC---------CHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHH
Confidence 5799999999999999999999999999999987 5566666666665421 234568874 34455
Q ss_pred HHHHHHHcC--CccEEEecC
Q psy9143 83 VQTALENFG--RIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~--~id~li~~A 100 (100)
++++.+..+ ++|++||||
T Consensus 121 ~~~l~~~~~~~didilVnnA 140 (320)
T PLN02780 121 VKRIKETIEGLDVGVLINNV 140 (320)
T ss_pred HHHHHHHhcCCCccEEEEec
Confidence 555555544 466999997
No 172
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.59 E-value=4.4e-14 Score=87.81 Aligned_cols=86 Identities=34% Similarity=0.455 Sum_probs=64.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~ 83 (100)
+++|+++|||+++|||.+++++|++.|++|++..+. .....+....++... ...+.+|+++.+++..++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN--------RKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALY 73 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCC--------CHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHH
Confidence 468999999999999999999999999999886431 333444444444332 234567999988888888
Q ss_pred HHHHHH----cC--CccEEEecC
Q psy9143 84 QTALEN----FG--RIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~----~~--~id~li~~A 100 (100)
+++.+. ++ ++|+|||||
T Consensus 74 ~~~~~~~~~~~g~~~id~lv~~A 96 (252)
T PRK12747 74 SSLDNELQNRTGSTKFDILINNA 96 (252)
T ss_pred HHHHHHhhhhcCCCCCCEEEECC
Confidence 877653 34 899999997
No 173
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.59 E-value=3.6e-14 Score=88.67 Aligned_cols=83 Identities=31% Similarity=0.548 Sum_probs=67.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~ 85 (100)
+++++|||++++||.+++++|+++|++|++++| +....+.+.+.+... ...+.+|+.+.+++..++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 71 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAAR---------NETRLASLAQELADHGGEALVVPTDVSDAEACERLIEA 71 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 468999999999999999999999999999987 334444444444332 33456799999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.++++++|++||||
T Consensus 72 ~~~~~~~id~vi~~a 86 (263)
T PRK06181 72 AVARFGGIDILVNNA 86 (263)
T ss_pred HHHHcCCCCEEEECC
Confidence 988899999999996
No 174
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.59 E-value=2.4e-14 Score=88.87 Aligned_cols=83 Identities=37% Similarity=0.524 Sum_probs=67.7
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~ 85 (100)
+++++|||++++||.+++++|+++|++|++++| +....+.+...+.. ......+|+.+.+++..++++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDL---------GEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAA 71 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 468999999999999999999999999999987 44444455444432 234456799999999999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+..+++|++||||
T Consensus 72 ~~~~~~~~d~vi~~a 86 (255)
T TIGR01963 72 AAAEFGGLDILVNNA 86 (255)
T ss_pred HHHhcCCCCEEEECC
Confidence 988889999999986
No 175
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.59 E-value=1.5e-14 Score=89.18 Aligned_cols=86 Identities=43% Similarity=0.621 Sum_probs=67.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 83 (100)
+++++++|||++++||.+++++|+++|++|++..++ .....+.+...+.. ....+.+|+.+.+++.+++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 75 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRS--------DEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAV 75 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC--------CHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHH
Confidence 456899999999999999999999999998776552 23333333333332 3345678999999999999
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+++.+.++++|++||+|
T Consensus 76 ~~~~~~~~~id~vi~~a 92 (249)
T PRK12825 76 AAAVERFGRIDILVNNA 92 (249)
T ss_pred HHHHHHcCCCCEEEECC
Confidence 99988889999999986
No 176
>PRK07069 short chain dehydrogenase; Validated
Probab=99.58 E-value=3.4e-14 Score=88.05 Aligned_cols=81 Identities=33% Similarity=0.514 Sum_probs=65.2
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC-----CceeeeccCcccHHHHHHHH
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~ 86 (100)
++|||+++|||.+++++|+++|++|++++++ ..+.++.+.+.+.... ..+.+|+++.+++.++++++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN--------DAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA 73 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC--------cchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH
Confidence 7999999999999999999999999999872 1333444444443321 23567999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.+.++++|++||||
T Consensus 74 ~~~~~~id~vi~~a 87 (251)
T PRK07069 74 ADAMGGLSVLVNNA 87 (251)
T ss_pred HHHcCCccEEEECC
Confidence 99999999999997
No 177
>KOG1014|consensus
Probab=99.58 E-value=3.2e-14 Score=89.91 Aligned_cols=81 Identities=32% Similarity=0.470 Sum_probs=64.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCC----ceeeeccCcccHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPDYNSVVDGDKIV 83 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~d~~~~~~~~~~~ 83 (100)
.++|++||||+.|||++.+++|+++|.+|++++| ++++++...+++.+... ...+|+++.+. ..
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsR---------t~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~---~y 115 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISR---------TQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE---VY 115 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHHHhCcEEEEEEEecCCCch---hH
Confidence 3589999999999999999999999999999987 88999999999877654 33558887764 34
Q ss_pred HHHHHHcC--CccEEEecC
Q psy9143 84 QTALENFG--RIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~--~id~li~~A 100 (100)
+.+.+... +|-+||||+
T Consensus 116 e~i~~~l~~~~VgILVNNv 134 (312)
T KOG1014|consen 116 EKLLEKLAGLDVGILVNNV 134 (312)
T ss_pred HHHHHHhcCCceEEEEecc
Confidence 44444433 567899996
No 178
>KOG1209|consensus
Probab=99.57 E-value=2.7e-14 Score=86.59 Aligned_cols=82 Identities=17% Similarity=0.182 Sum_probs=67.8
Q ss_pred CCCEEEEecCCC-chhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 8 DGRVAIVTGAGA-GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 8 ~~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
..|.++||||++ |||.+++++|.++|+.|+.+.| ..+.+.++.. ......+.+|+++++++..+..++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR---------~~e~M~~L~~--~~gl~~~kLDV~~~~~V~~v~~ev 74 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATAR---------RLEPMAQLAI--QFGLKPYKLDVSKPEEVVTVSGEV 74 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcc---------ccchHhhHHH--hhCCeeEEeccCChHHHHHHHHHH
Confidence 457899998884 8999999999999999999987 4445555532 344566788999999999999999
Q ss_pred HH-HcCCccEEEecC
Q psy9143 87 LE-NFGRIDIVINNA 100 (100)
Q Consensus 87 ~~-~~~~id~li~~A 100 (100)
++ ..|++|+|+|||
T Consensus 75 r~~~~Gkld~L~NNA 89 (289)
T KOG1209|consen 75 RANPDGKLDLLYNNA 89 (289)
T ss_pred hhCCCCceEEEEcCC
Confidence 88 779999999997
No 179
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.57 E-value=4.7e-14 Score=86.94 Aligned_cols=83 Identities=28% Similarity=0.329 Sum_probs=65.7
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
|+++|||++++||.+++++|+++|++++++.++ .....+....+... ....+.+|+++++.+.++++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGP--------NEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKV 72 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence 679999999999999999999999999887652 22333333333322 2345678999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.+.++++|++||||
T Consensus 73 ~~~~~~id~vi~~a 86 (242)
T TIGR01829 73 EAELGPIDVLVNNA 86 (242)
T ss_pred HHHcCCCcEEEECC
Confidence 98899999999996
No 180
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.57 E-value=2.9e-14 Score=88.95 Aligned_cols=81 Identities=28% Similarity=0.344 Sum_probs=65.1
Q ss_pred EEEEecCCCchhHHHHHHHHH----cCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-----cCCceeeeccCcccHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLAE----RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPDYNSVVDGDK 81 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~ 81 (100)
+++|||+++|||++++++|++ .|++|++++| +...++++.+++.. ....+.+|+++.+++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~ 72 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSAR---------NDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQ 72 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEc---------CHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHH
Confidence 689999999999999999997 7999999987 45556666666554 22346789999999999
Q ss_pred HHHHHHHHcCCc----cEEEecC
Q psy9143 82 IVQTALENFGRI----DIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~i----d~li~~A 100 (100)
+++++.+.++++ |+|||||
T Consensus 73 ~~~~~~~~~g~~~~~~~~lv~nA 95 (256)
T TIGR01500 73 LLKALRELPRPKGLQRLLLINNA 95 (256)
T ss_pred HHHHHHhccccCCCceEEEEeCC
Confidence 999988776643 5899997
No 181
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.57 E-value=4.5e-14 Score=87.25 Aligned_cols=83 Identities=30% Similarity=0.338 Sum_probs=65.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~ 86 (100)
++++|||++++||.+++++|+++|++|++..+ +..+..++...++... ...+.+|++|.++++++++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~ 73 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQ--------QNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAI 73 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC--------CChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHH
Confidence 58999999999999999999999999877532 1333444444444332 344678999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.+.++++|++||||
T Consensus 74 ~~~~~~id~vi~~a 87 (247)
T PRK09730 74 DQHDEPLAALVNNA 87 (247)
T ss_pred HHhCCCCCEEEECC
Confidence 88899999999996
No 182
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.56 E-value=5.8e-14 Score=93.83 Aligned_cols=85 Identities=34% Similarity=0.495 Sum_probs=68.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
+++++++|||+++|||.+++++|+++|++|++++++ ...+.+..+.+++ ....+.+|+++.++++++++.+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~-------~~~~~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~ 278 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP-------AAGEALAAVANRV--GGTALALDITAPDAPARIAEHL 278 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-------ccHHHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHH
Confidence 468999999999999999999999999999998762 1223333333322 2245678999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.++++++|++||||
T Consensus 279 ~~~~g~id~vi~~A 292 (450)
T PRK08261 279 AERHGGLDIVVHNA 292 (450)
T ss_pred HHhCCCCCEEEECC
Confidence 99899999999997
No 183
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.56 E-value=6.1e-14 Score=86.58 Aligned_cols=83 Identities=27% Similarity=0.356 Sum_probs=65.2
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH---hcCCceeeeccCcccHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR---SKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
|+++|||++++||.+++++|+++|++|++++|+. .+........+. .....+.+|+++.+++.++++.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 74 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG--------NDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEI 74 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc--------HHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 6899999999999999999999999999998731 122222222222 22345678999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.++++++|++||||
T Consensus 75 ~~~~~~id~vi~~a 88 (245)
T PRK12824 75 EEEEGPVDILVNNA 88 (245)
T ss_pred HHHcCCCCEEEECC
Confidence 99999999999986
No 184
>KOG1610|consensus
Probab=99.55 E-value=4.5e-14 Score=89.42 Aligned_cols=86 Identities=21% Similarity=0.290 Sum_probs=72.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHH-HhcCCceeeeccCcccHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
...+|.++||||.+|+|..+|++|.++|+.|++.+. .++..+.+..+. ..+...+++|+++++++.++.+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl---------~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~ 96 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCL---------TEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQ 96 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEee---------cCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHH
Confidence 356799999999999999999999999999999874 455556666666 5566777899999999999999
Q ss_pred HHHHHcC--CccEEEecC
Q psy9143 85 TALENFG--RIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~--~id~li~~A 100 (100)
.+.++.+ .++.|||||
T Consensus 97 ~V~~~l~~~gLwglVNNA 114 (322)
T KOG1610|consen 97 WVKKHLGEDGLWGLVNNA 114 (322)
T ss_pred HHHHhcccccceeEEecc
Confidence 8888763 599999998
No 185
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.54 E-value=2.6e-14 Score=91.35 Aligned_cols=37 Identities=35% Similarity=0.674 Sum_probs=33.6
Q ss_pred CCCCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++++|+++|||++ +|||+++++.|+++|++|++.++
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 45689999999996 99999999999999999999765
No 186
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.54 E-value=5.6e-14 Score=91.83 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=64.9
Q ss_pred CCCEEEEecCCCchhHH--HHHHHHHcCCeEEEEcCCCCCCCCCC-------ChHHHHHHHHHHHhcCCceeeeccCccc
Q psy9143 8 DGRVAIVTGAGAGLGRS--YALLLAERGASVVVNDLGGQRDGDGK-------SSKAADTVVAEIRSKGGKAVPDYNSVVD 78 (100)
Q Consensus 8 ~~~~~litG~~~gig~~--~~~~l~~~g~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 78 (100)
.+|++||||+++|||.+ +++.| +.|++++++++..... ..+ +.....+..+........+.+|+++.++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~-~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGT-EKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchh-hhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 46899999999999999 89999 9999988876521100 000 0111222222211122346789999999
Q ss_pred HHHHHHHHHHHcCCccEEEecC
Q psy9143 79 GDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 79 ~~~~~~~~~~~~~~id~li~~A 100 (100)
+.++++++.+++|+||+||||+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSa 139 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSL 139 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECC
Confidence 9999999999999999999996
No 187
>PRK12742 oxidoreductase; Provisional
Probab=99.54 E-value=1.1e-13 Score=85.17 Aligned_cols=81 Identities=26% Similarity=0.366 Sum_probs=58.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.+++++++|||+++|||.+++++|+++|++|+++.++ ..+..+++..+. ....+.+|+++.+.+.+++.
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~--------~~~~~~~l~~~~--~~~~~~~D~~~~~~~~~~~~- 71 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG--------SKDAAERLAQET--GATAVQTDSADRDAVIDVVR- 71 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC--------CHHHHHHHHHHh--CCeEEecCCCCHHHHHHHHH-
Confidence 3678999999999999999999999999998887541 233333333322 12345578877766555543
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
.++++|++||||
T Consensus 72 ---~~~~id~li~~a 83 (237)
T PRK12742 72 ---KSGALDILVVNA 83 (237)
T ss_pred ---HhCCCcEEEECC
Confidence 457899999996
No 188
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.53 E-value=9e-14 Score=85.74 Aligned_cols=81 Identities=27% Similarity=0.344 Sum_probs=64.8
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHHHHH
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
++|||+++|||.+++++|+++|++|+++++. ..+..+...+++.. +...+.+|+++.+++.++++++.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHS--------GRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 5899999999999999999999999888752 23334444444433 234567899999999999999888
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
.++++|++||||
T Consensus 73 ~~~~i~~li~~a 84 (239)
T TIGR01831 73 EHGAYYGVVLNA 84 (239)
T ss_pred HcCCCCEEEECC
Confidence 899999999986
No 189
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.51 E-value=7.8e-14 Score=86.92 Aligned_cols=78 Identities=18% Similarity=0.240 Sum_probs=55.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+.+++++++|||+++|||.++++.|+++|++|++++|+.. +..+. ........+.+|+++.+++.
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~--------~~~~~---~~~~~~~~~~~D~~~~~~~~---- 74 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKI--------NNSES---NDESPNEWIKWECGKEESLD---- 74 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCch--------hhhhh---hccCCCeEEEeeCCCHHHHH----
Confidence 4578899999999999999999999999999999877320 11111 11111234567887775443
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
+.++++|++||||
T Consensus 75 ---~~~~~iDilVnnA 87 (245)
T PRK12367 75 ---KQLASLDVLILNH 87 (245)
T ss_pred ---HhcCCCCEEEECC
Confidence 3457899999997
No 190
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.51 E-value=2.3e-13 Score=84.23 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=61.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh----cCCceeeeccCcccHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++||||++|||.+++++|+++|++|++++| ..+..+...+.+.. +...+.+|+++.+++.+++++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 72 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAAR---------DVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS 72 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC---------CHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence 67999999999999999999999999999987 33444444433332 334567899999988888887
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+ ++|++||||
T Consensus 73 ~~~---~~d~vv~~a 84 (243)
T PRK07102 73 LPA---LPDIVLIAV 84 (243)
T ss_pred Hhh---cCCEEEECC
Confidence 654 579999986
No 191
>PRK08264 short chain dehydrogenase; Validated
Probab=99.51 E-value=1.2e-13 Score=85.07 Aligned_cols=79 Identities=24% Similarity=0.374 Sum_probs=59.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 83 (100)
+++.+++++||||+++||.+++++|+++|+ +|++++|+ .+..++ .......+.+|+.+.+++.+++
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~---------~~~~~~----~~~~~~~~~~D~~~~~~~~~~~ 68 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD---------PESVTD----LGPRVVPLQLDVTDPASVAAAA 68 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecC---------hhhhhh----cCCceEEEEecCCCHHHHHHHH
Confidence 456789999999999999999999999999 89988773 222221 2233445678998888776665
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
+. .+++|++||+|
T Consensus 69 ~~----~~~id~vi~~a 81 (238)
T PRK08264 69 EA----ASDVTILVNNA 81 (238)
T ss_pred Hh----cCCCCEEEECC
Confidence 43 46899999986
No 192
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.49 E-value=2.8e-13 Score=89.59 Aligned_cols=80 Identities=21% Similarity=0.203 Sum_probs=55.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHH
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
+++++|+++||||++|||.+++++|+++|++|++++| +.+...............+.+|++|.+++.+
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r---------~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~--- 241 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTS---------NSDKITLEINGEDLPVKTLHWQVGQEAALAE--- 241 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH---
Confidence 4567899999999999999999999999999999876 2222222111111112345668877655433
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
.++++|++||||
T Consensus 242 ----~l~~IDiLInnA 253 (406)
T PRK07424 242 ----LLEKVDILIINH 253 (406)
T ss_pred ----HhCCCCEEEECC
Confidence 346899999996
No 193
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.48 E-value=3.7e-13 Score=82.69 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=59.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
.++||||++|||.++++.|+++|++|++++| +.+.++...+++ ....+.+|+++.++++++++++.+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r---------~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~-- 68 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA---------RRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPH-- 68 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhh--
Confidence 3899999999999999999999999999877 444444444333 234567899999988888876643
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
++|++||||
T Consensus 69 -~id~lv~~a 77 (223)
T PRK05884 69 -HLDTIVNVP 77 (223)
T ss_pred -cCcEEEECC
Confidence 699999986
No 194
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.48 E-value=2.8e-13 Score=83.86 Aligned_cols=78 Identities=19% Similarity=0.178 Sum_probs=60.6
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
++++|||+++|||.+++++|+++|++|++++| +.+.++++... ......+.+|+++.+++.++++++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-- 69 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGR---------NQSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLP-- 69 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEEC---------CHHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhcc--
Confidence 67999999999999999999999999999987 44444444332 2334567889999998888887653
Q ss_pred cCCccEEEecC
Q psy9143 90 FGRIDIVINNA 100 (100)
Q Consensus 90 ~~~id~li~~A 100 (100)
..+|.+||||
T Consensus 70 -~~~d~~i~~a 79 (240)
T PRK06101 70 -FIPELWIFNA 79 (240)
T ss_pred -cCCCEEEEcC
Confidence 2478888886
No 195
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.48 E-value=3.1e-13 Score=83.89 Aligned_cols=83 Identities=25% Similarity=0.308 Sum_probs=61.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
|+++|||+++|||++++++|+++|++|++++|+. .+.++.+..........+.+|+++.++++++++++.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE--------NKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSS 73 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc--------hHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999988731 12333333222233456788999999999999988776
Q ss_pred cCC--cc--EEEecC
Q psy9143 90 FGR--ID--IVINNA 100 (100)
Q Consensus 90 ~~~--id--~li~~A 100 (100)
++. ++ ++|+||
T Consensus 74 ~~~~~~~~~~~v~~a 88 (251)
T PRK06924 74 IQEDNVSSIHLINNA 88 (251)
T ss_pred cCcccCCceEEEEcc
Confidence 542 22 678775
No 196
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.48 E-value=5.1e-13 Score=82.11 Aligned_cols=81 Identities=38% Similarity=0.546 Sum_probs=64.0
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc---CCceeeeccCcccHHHHHHHHHH
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
++|||++++||..++++|+++|++|++++|+. .+..+.....+... ...+.+|+++.+.++++++.+.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSS--------EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCc--------hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 58999999999999999999999999987731 22333333344332 23567899999999999999988
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
.++++|++||||
T Consensus 73 ~~~~id~vi~~a 84 (239)
T TIGR01830 73 ELGPIDILVNNA 84 (239)
T ss_pred HhCCCCEEEECC
Confidence 889999999986
No 197
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.48 E-value=3.4e-13 Score=82.71 Aligned_cols=78 Identities=28% Similarity=0.322 Sum_probs=60.2
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
++++|||+++|||.+++++|+++|++|++++|+.. ..+.+. .+ .......+|++|.+++.++++.+.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~---------~~~~~~-~~-~~~~~~~~D~~d~~~~~~~~~~~~~- 69 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQ---------QDTALQ-AL-PGVHIEKLDMNDPASLDQLLQRLQG- 69 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCc---------chHHHH-hc-cccceEEcCCCCHHHHHHHHHHhhc-
Confidence 67999999999999999999999999999987432 122221 11 2344567899999988888887743
Q ss_pred cCCccEEEecC
Q psy9143 90 FGRIDIVINNA 100 (100)
Q Consensus 90 ~~~id~li~~A 100 (100)
+++|++||||
T Consensus 70 -~~id~vi~~a 79 (225)
T PRK08177 70 -QRFDLLFVNA 79 (225)
T ss_pred -CCCCEEEEcC
Confidence 4799999986
No 198
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.46 E-value=5.7e-13 Score=81.88 Aligned_cols=75 Identities=24% Similarity=0.309 Sum_probs=61.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
.+++++|||++++||.+++++|+++|++|++++|+... . . ....+.+|+++.+++.++++++.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----------~----~--~~~~~~~D~~~~~~~~~~~~~~~ 64 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----------D----F--PGELFACDLADIEQTAATLAQIN 64 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----------c----c--CceEEEeeCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999874221 0 0 11356789999999999999887
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
+.+ ++|++||||
T Consensus 65 ~~~-~~d~vi~~a 76 (234)
T PRK07577 65 EIH-PVDAIVNNV 76 (234)
T ss_pred HhC-CCcEEEECC
Confidence 776 689999986
No 199
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.46 E-value=6.7e-13 Score=81.05 Aligned_cols=87 Identities=20% Similarity=0.299 Sum_probs=71.3
Q ss_pred CCCCCEEEEecCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 83 (100)
.|+||+++|+|-. .+|++.+++.+.++|+.+.++..++ +..++.+++.+++.+ ...+.||+++.++++.+|
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e------~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f 75 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE------RLEKRVEELAEELGS-DLVLPCDVTNDESIDALF 75 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH------HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHH
Confidence 4789999999876 5899999999999999999987632 134445555544433 346789999999999999
Q ss_pred HHHHHHcCCccEEEec
Q psy9143 84 QTALENFGRIDIVINN 99 (100)
Q Consensus 84 ~~~~~~~~~id~li~~ 99 (100)
+++.+++|++|+|||+
T Consensus 76 ~~i~~~~g~lD~lVHs 91 (259)
T COG0623 76 ATIKKKWGKLDGLVHS 91 (259)
T ss_pred HHHHHhhCcccEEEEE
Confidence 9999999999999996
No 200
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.45 E-value=2.8e-13 Score=83.86 Aligned_cols=74 Identities=36% Similarity=0.585 Sum_probs=59.9
Q ss_pred cCC--CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHH----HHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 16 GAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKA----ADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 16 G~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
|++ +|||++++++|+++|++|+++++ +.+. ++++.++.... .+.+|+++.++++++++++.+.
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~---------~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~ 69 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDR---------NEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVER 69 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEES---------SHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhh
Confidence 455 99999999999999999999988 4444 33333333322 4778999999999999999999
Q ss_pred c-CCccEEEecC
Q psy9143 90 F-GRIDIVINNA 100 (100)
Q Consensus 90 ~-~~id~li~~A 100 (100)
+ +++|+||||+
T Consensus 70 ~~g~iD~lV~~a 81 (241)
T PF13561_consen 70 FGGRIDILVNNA 81 (241)
T ss_dssp HCSSESEEEEEE
T ss_pred cCCCeEEEEecc
Confidence 9 9999999985
No 201
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.44 E-value=5.3e-13 Score=79.81 Aligned_cols=84 Identities=32% Similarity=0.412 Sum_probs=61.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHHHHHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~ 86 (100)
+++|||+.+|||..++++|+++|. +++++.|+.. .........+++...+ ....+|++|++.+.++++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~------~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~ 75 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGA------PSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQL 75 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGG------GSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCC------ccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHH
Confidence 689999999999999999999986 7888887421 1122233444555443 44568999999999999999
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
.+.+++|+++||+|
T Consensus 76 ~~~~~~i~gVih~a 89 (181)
T PF08659_consen 76 RQRFGPIDGVIHAA 89 (181)
T ss_dssp HTTSS-EEEEEE--
T ss_pred HhccCCcceeeeee
Confidence 99899999999986
No 202
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.6e-12 Score=80.83 Aligned_cols=77 Identities=27% Similarity=0.422 Sum_probs=56.6
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~ 85 (100)
+++++|||+++|||.+++++|+++|++|++++| .....+.+...... ....+.+|+++.+++.+++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 71 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQ---------IAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE- 71 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-
Confidence 578999999999999999999999999999876 33444444333332 23345678888766655432
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+++|+|||||
T Consensus 72 -----~~id~vi~~a 81 (257)
T PRK09291 72 -----WDVDVLLNNA 81 (257)
T ss_pred -----CCCCEEEECC
Confidence 3799999986
No 203
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.43 E-value=7.1e-13 Score=82.01 Aligned_cols=79 Identities=25% Similarity=0.283 Sum_probs=59.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH-HHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT-ALEN 89 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~ 89 (100)
+++|||+++|||.+++++|+++|++|++++|+.. .. .......+...+.+|+++.+++++++.+ +.+.
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~--------~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 71 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH--------PS---LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAA 71 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc--------hh---hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999887321 11 1111122344567899999999987776 5544
Q ss_pred c---CCccEEEecC
Q psy9143 90 F---GRIDIVINNA 100 (100)
Q Consensus 90 ~---~~id~li~~A 100 (100)
+ +++|++||||
T Consensus 72 ~~~~~~~~~~v~~a 85 (243)
T PRK07023 72 FVDGASRVLLINNA 85 (243)
T ss_pred hccCCCceEEEEcC
Confidence 4 4799999996
No 204
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.43 E-value=7.6e-13 Score=81.20 Aligned_cols=75 Identities=23% Similarity=0.286 Sum_probs=57.9
Q ss_pred EEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH--hcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 13 IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 13 litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
+|||+++|||.+++++|+++|++|++++| +.+..+.....+. .....+.+|+++.+++.+++++ .
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~ 67 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASR---------SRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----A 67 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----c
Confidence 58999999999999999999999999987 4444444444442 2234567899999888777654 4
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
+++|++||||
T Consensus 68 ~~id~li~~a 77 (230)
T PRK07041 68 GPFDHVVITA 77 (230)
T ss_pred CCCCEEEECC
Confidence 7899999986
No 205
>PRK08017 oxidoreductase; Provisional
Probab=99.42 E-value=2.6e-12 Score=79.89 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=61.6
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
++++|||++|+||.+++++|+++|++|++++| +.+..+.+.+ .....+.+|+++.+++.++++.+...
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~ 70 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACR---------KPDDVARMNS---LGFTGILLDLDDPESVERAADEVIAL 70 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHhHHHHh---CCCeEEEeecCCHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999877 3333333221 12345678999998888888887664
Q ss_pred c-CCccEEEecC
Q psy9143 90 F-GRIDIVINNA 100 (100)
Q Consensus 90 ~-~~id~li~~A 100 (100)
. +++|.+||||
T Consensus 71 ~~~~~~~ii~~a 82 (256)
T PRK08017 71 TDNRLYGLFNNA 82 (256)
T ss_pred cCCCCeEEEECC
Confidence 3 6899999986
No 206
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.42 E-value=5.3e-13 Score=82.12 Aligned_cols=74 Identities=22% Similarity=0.279 Sum_probs=55.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++|+++|||++++||.+++++|+++|++|++++++... . .......+.+|+++. +++
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~-------~--------~~~~~~~~~~D~~~~------~~~ 60 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP-------D--------LSGNFHFLQLDLSDD------LEP 60 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccc-------c--------cCCcEEEEECChHHH------HHH
Confidence 3678999999999999999999999999999998873211 0 011233455677655 555
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+.+.++++|++||||
T Consensus 61 ~~~~~~~id~lv~~a 75 (235)
T PRK06550 61 LFDWVPSVDILCNTA 75 (235)
T ss_pred HHHhhCCCCEEEECC
Confidence 556678999999996
No 207
>KOG1478|consensus
Probab=99.42 E-value=2.7e-12 Score=79.74 Aligned_cols=84 Identities=21% Similarity=0.281 Sum_probs=68.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-----eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC-------CceeeeccC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-----SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-------GKAVPDYNS 75 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~d~~~ 75 (100)
..|+++|||+++|||+++|++|++..- ++.+.+| +-++.+..++.+.+.. ..+.+|+++
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR---------~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sN 72 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCR---------NMSKAEAVCAALKAFHPKSTIEVTYVLVDVSN 72 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeC---------ChhHHHHHHHHHHHhCCCceeEEEEEEEehhh
Confidence 468999999999999999999998642 4666666 5566777776665532 345679999
Q ss_pred cccHHHHHHHHHHHcCCccEEEecC
Q psy9143 76 VVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 76 ~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
..++.++..++.+++.++|.+..||
T Consensus 73 m~Sv~~A~~di~~rf~~ld~iylNA 97 (341)
T KOG1478|consen 73 MQSVFRASKDIKQRFQRLDYIYLNA 97 (341)
T ss_pred HHHHHHHHHHHHHHhhhccEEEEcc
Confidence 9999999999999999999998886
No 208
>KOG1611|consensus
Probab=99.41 E-value=2.9e-12 Score=78.16 Aligned_cols=84 Identities=21% Similarity=0.265 Sum_probs=63.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHc-CCeEEEEcCCCCCCCCCCChHH-HHHHHHH--HHhcCCceeeeccCcccHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKA-ADTVVAE--IRSKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~ 84 (100)
.+.++||||++|||+.++++|.+. |..+++..+ ++.+. .+++... ..++.+.+++|+++.+++.++++
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~--------r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~ 74 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATA--------RDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQ 74 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEec--------CChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHH
Confidence 467999999999999999999975 555555443 13333 2222221 24567888999999999999999
Q ss_pred HHHHH--cCCccEEEecC
Q psy9143 85 TALEN--FGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~--~~~id~li~~A 100 (100)
++.+- ...+++|||||
T Consensus 75 ~V~~iVg~~GlnlLinNa 92 (249)
T KOG1611|consen 75 EVEKIVGSDGLNLLINNA 92 (249)
T ss_pred HHHhhcccCCceEEEecc
Confidence 99886 35799999997
No 209
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.39 E-value=3.5e-12 Score=78.08 Aligned_cols=77 Identities=16% Similarity=0.192 Sum_probs=59.0
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
++++|||++++||.+++++|++.|++|+++++ +.+..+.+.. .....+.+|+++.+.++++++++..
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r---------~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~- 68 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATAR---------DAAALAALQA---LGAEALALDVADPASVAGLAWKLDG- 68 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEEC---------CHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcC-
Confidence 57999999999999999999999999999877 3333333321 1234578899999988887766532
Q ss_pred cCCccEEEecC
Q psy9143 90 FGRIDIVINNA 100 (100)
Q Consensus 90 ~~~id~li~~A 100 (100)
+++|++||||
T Consensus 69 -~~~d~vi~~a 78 (222)
T PRK06953 69 -EALDAAVYVA 78 (222)
T ss_pred -CCCCEEEECC
Confidence 4799999986
No 210
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.38 E-value=1.1e-11 Score=72.55 Aligned_cols=85 Identities=26% Similarity=0.300 Sum_probs=61.2
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++|||++++||.+++++|+++|+ .|++..|+... ........+.+.. ....+.+|+++.+.+++++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 74 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPD------APGAAELLAELEALGAEVTVVACDVADRAALAAALAA 74 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCC------CccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 4689999999999999999999997 57777663221 1111111122222 223456799998889999999
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+...++++|.+||||
T Consensus 75 ~~~~~~~id~li~~a 89 (180)
T smart00822 75 IPARLGPLRGVIHAA 89 (180)
T ss_pred HHHHcCCeeEEEEcc
Confidence 888889999999986
No 211
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.36 E-value=4.6e-12 Score=82.29 Aligned_cols=82 Identities=23% Similarity=0.227 Sum_probs=57.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
+++++++||||+|+||.++++.|+++|++|++++|+.. ......... ........+.+|+.+.+++.+++++.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPP------TSPNLFELL-NLAKKIEDHFGDIRDAAKLRKAIAEF 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCc------cchhHHHHH-hhcCCceEEEccCCCHHHHHHHHhhc
Confidence 46789999999999999999999999999999887321 111111111 11122334667888888777777653
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
++|++||+|
T Consensus 75 -----~~d~vih~A 83 (349)
T TIGR02622 75 -----KPEIVFHLA 83 (349)
T ss_pred -----CCCEEEECC
Confidence 589999986
No 212
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.36 E-value=8.5e-12 Score=76.24 Aligned_cols=77 Identities=25% Similarity=0.375 Sum_probs=57.5
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
.++++|||++++||.++++.|+++ ++|++++| +....+.+.... .....+.+|+++.+++.++++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r---------~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~--- 68 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGR---------PAERLDELAAEL-PGATPFPVDLTDPEAIAAAVEQ--- 68 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeC---------CHHHHHHHHHHh-ccceEEecCCCCHHHHHHHHHh---
Confidence 478999999999999999999999 99999987 333333333222 2345567889888776666654
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
.+++|++||+|
T Consensus 69 -~~~id~vi~~a 79 (227)
T PRK08219 69 -LGRLDVLVHNA 79 (227)
T ss_pred -cCCCCEEEECC
Confidence 35899999986
No 213
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.36 E-value=7.2e-12 Score=85.55 Aligned_cols=78 Identities=22% Similarity=0.194 Sum_probs=56.8
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh------------cCCceeeecc
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS------------KGGKAVPDYN 74 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~d~~ 74 (100)
.++++++||||+|+||.+++++|+++|++|++++| +....+.+...+.. +...+.+|+.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R---------n~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt 148 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR---------SAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE 148 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence 36789999999999999999999999999999887 44444444333221 1234567887
Q ss_pred CcccHHHHHHHHHHHcCCccEEEecC
Q psy9143 75 SVVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
+.+++.+ .++++|+||||+
T Consensus 149 D~esI~~-------aLggiDiVVn~A 167 (576)
T PLN03209 149 KPDQIGP-------ALGNASVVICCI 167 (576)
T ss_pred CHHHHHH-------HhcCCCEEEEcc
Confidence 7655433 346899999986
No 214
>KOG1207|consensus
Probab=99.33 E-value=2.2e-12 Score=76.24 Aligned_cols=82 Identities=32% Similarity=0.375 Sum_probs=60.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++.|+.+++||+..|||++++..|++.|+.|+...| ++..+.++.++.+....-+..|+++ .+.+++
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR---------~~a~L~sLV~e~p~~I~Pi~~Dls~---wea~~~- 70 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVAR---------NEANLLSLVKETPSLIIPIVGDLSA---WEALFK- 70 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEec---------CHHHHHHHHhhCCcceeeeEecccH---HHHHHH-
Confidence 467999999999999999999999999999999977 7777777766544433333445554 333332
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
.....+++|.++|||
T Consensus 71 ~l~~v~pidgLVNNA 85 (245)
T KOG1207|consen 71 LLVPVFPIDGLVNNA 85 (245)
T ss_pred hhcccCchhhhhccc
Confidence 334457899999997
No 215
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.33 E-value=1.1e-11 Score=80.00 Aligned_cols=78 Identities=13% Similarity=0.200 Sum_probs=55.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcC--CeEEEEcCCCCCCCCCCChHHHHHHHHHHHh-cCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 83 (100)
+++++++||||+|+||.++++.|+++| ++|++++|+ ......+...+.. ....+.+|+.|.+.+.+++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~---------~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~ 72 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD---------ELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL 72 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC---------hhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH
Confidence 468999999999999999999999986 678888762 2222223223221 2334567888877666554
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
. .+|++||+|
T Consensus 73 ~-------~iD~Vih~A 82 (324)
T TIGR03589 73 R-------GVDYVVHAA 82 (324)
T ss_pred h-------cCCEEEECc
Confidence 3 589999986
No 216
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.32 E-value=5.7e-12 Score=81.64 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=56.7
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHH----HhcCCceeeeccCcccHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI----RSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
|+++||||+|+||.+++++|++.|++|++++|+.... .......+.... ......+.+|++|.+.+.++++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 76 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSF----NTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDE 76 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCccc----chhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHh
Confidence 5799999999999999999999999999988743210 011121211111 12235567899888877777765
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
. ++|+|||+|
T Consensus 77 ~-----~~d~ViH~A 86 (343)
T TIGR01472 77 I-----KPTEIYNLA 86 (343)
T ss_pred C-----CCCEEEECC
Confidence 3 589999987
No 217
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.31 E-value=2.3e-11 Score=81.50 Aligned_cols=90 Identities=18% Similarity=0.063 Sum_probs=58.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCC---C--------hHHHHHHHHHHHhcCCceeeecc
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGK---S--------SKAADTVVAEIRSKGGKAVPDYN 74 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~d~~ 74 (100)
.+++++++||||+|+||.+++++|+++|++|+++++...+..... . ...++.+..........+.+|+.
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 457789999999999999999999999999999875221110000 0 01111111111113445667888
Q ss_pred CcccHHHHHHHHHHHcCCccEEEecC
Q psy9143 75 SVVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
|.+.+.+++++. ++|+|||+|
T Consensus 124 d~~~v~~~l~~~-----~~D~ViHlA 144 (442)
T PLN02572 124 DFEFLSEAFKSF-----EPDAVVHFG 144 (442)
T ss_pred CHHHHHHHHHhC-----CCCEEEECC
Confidence 887777777653 689999986
No 218
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.30 E-value=1.1e-11 Score=80.22 Aligned_cols=86 Identities=16% Similarity=0.105 Sum_probs=59.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHH---HhcCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI---RSKGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~ 82 (100)
++++++++||||+|+||.+++++|+++|++|+++++..... ....++.+.... ......+.+|+.|.+.+.++
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 78 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNF----NTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRW 78 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccc----cccchhhhccccccccCceEEEEecCCCHHHHHHH
Confidence 45678999999999999999999999999999987743211 011122221110 11234566788888877777
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
+... .+|+|||+|
T Consensus 79 ~~~~-----~~d~Vih~A 91 (340)
T PLN02653 79 LDDI-----KPDEVYNLA 91 (340)
T ss_pred HHHc-----CCCEEEECC
Confidence 7654 589999997
No 219
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.29 E-value=2e-11 Score=78.51 Aligned_cols=80 Identities=20% Similarity=0.153 Sum_probs=54.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHH--HhcCCceeeeccCcccHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI--RSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.+++++||||+|+||.+++++|+++|++|+++.|+... ........... ......+.+|+++.+.+.++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKD------RKKTDHLLALDGAKERLKLFKADLLDEGSFELAID- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcc------hhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-
Confidence 36899999999999999999999999999887763211 11111111100 0123345678888877666653
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
.+|++||||
T Consensus 77 ------~~d~vih~A 85 (325)
T PLN02989 77 ------GCETVFHTA 85 (325)
T ss_pred ------CCCEEEEeC
Confidence 589999987
No 220
>PLN02240 UDP-glucose 4-epimerase
Probab=99.28 E-value=1.6e-11 Score=79.59 Aligned_cols=85 Identities=27% Similarity=0.214 Sum_probs=58.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHH---HhcCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI---RSKGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~ 82 (100)
+|++++++|||++|++|.+++++|+++|++|+++++...+ ............ ......+.+|+.+.+.+..+
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~ 76 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNS-----SEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKV 76 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcc-----hHHHHHHHHHhhcccCccceEEecCcCCHHHHHHH
Confidence 4678899999999999999999999999999998763210 111111221111 11234556788888777766
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
++.. .+|.|||+|
T Consensus 77 ~~~~-----~~d~vih~a 89 (352)
T PLN02240 77 FAST-----RFDAVIHFA 89 (352)
T ss_pred HHhC-----CCCEEEEcc
Confidence 6542 799999986
No 221
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.28 E-value=1.9e-11 Score=94.02 Aligned_cols=92 Identities=26% Similarity=0.268 Sum_probs=64.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHc-CCeEEEEcCCCCCC---CC--CCC------------------------------
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRD---GD--GKS------------------------------ 51 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~---~~--~~~------------------------------ 51 (100)
.+++++||||++|||.+++++|+++ |+++++++|+.... .+ +..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4789999999999999999999998 69999998862100 00 000
Q ss_pred ---hHHHHHHHHHHHhcC---CceeeeccCcccHHHHHHHHHHHcCCccEEEecC
Q psy9143 52 ---SKAADTVVAEIRSKG---GKAVPDYNSVVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 52 ---~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
........+.+...+ ..+.+|++|.+.+.++++++.+. ++||+|||||
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnA 2129 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGA 2129 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECC
Confidence 011111122222222 34578999999999999998776 6899999997
No 222
>KOG1210|consensus
Probab=99.27 E-value=2.9e-11 Score=76.85 Aligned_cols=82 Identities=26% Similarity=0.243 Sum_probs=69.9
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC--C---ceeeeccCcccHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--G---KAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~d~~~~~~~~~~~~ 84 (100)
+.++|||+++|||++++..+...|++|.++.| +.+++.++.++++-.. . ...+|+.|-+.++..++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar---------~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~ 104 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITAR---------SGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIE 104 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEec---------cHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHh
Confidence 68999999999999999999999999999977 6777777777775422 2 34568888888999999
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
++.+..+++|.+|+||
T Consensus 105 ~l~~~~~~~d~l~~cA 120 (331)
T KOG1210|consen 105 ELRDLEGPIDNLFCCA 120 (331)
T ss_pred hhhhccCCcceEEEec
Confidence 9988889999999997
No 223
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.26 E-value=3.1e-11 Score=72.82 Aligned_cols=62 Identities=21% Similarity=0.339 Sum_probs=52.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
+++|||+++|||.++++.|+++ ++|++++|+. . .+.+|+++.+++++++++ .
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~---------~--------------~~~~D~~~~~~~~~~~~~----~ 53 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS---------G--------------DVQVDITDPASIRALFEK----V 53 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC---------C--------------ceEecCCChHHHHHHHHh----c
Confidence 5899999999999999999999 9999987621 1 357899999888777654 4
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
+++|++||||
T Consensus 54 ~~id~lv~~a 63 (199)
T PRK07578 54 GKVDAVVSAA 63 (199)
T ss_pred CCCCEEEECC
Confidence 7899999997
No 224
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.26 E-value=9.3e-11 Score=70.02 Aligned_cols=79 Identities=22% Similarity=0.240 Sum_probs=61.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHHHHHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
+++|||++ |+|.++++.|+++|++|++++| ..+..+.+...+.. ....+.+|+.|.+++.++++.+.+
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R---------~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~ 71 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIAR---------REVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIE 71 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEEC---------CHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 58999997 7878899999999999999876 44444444433332 223345799999999999999988
Q ss_pred HcCCccEEEec
Q psy9143 89 NFGRIDIVINN 99 (100)
Q Consensus 89 ~~~~id~li~~ 99 (100)
.++++|++|+.
T Consensus 72 ~~g~id~lv~~ 82 (177)
T PRK08309 72 KNGPFDLAVAW 82 (177)
T ss_pred HcCCCeEEEEe
Confidence 88999999875
No 225
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.24 E-value=6.7e-11 Score=76.51 Aligned_cols=86 Identities=16% Similarity=0.105 Sum_probs=56.6
Q ss_pred CCCCCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCccc
Q psy9143 1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVD 78 (100)
Q Consensus 1 m~~~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~ 78 (100)
|.+.-.+++++++||||+|+||.+++++|+++|++|+++.|... ........ ..+.. ....+..|+.|.+.
T Consensus 1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~ 73 (338)
T PLN00198 1 MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE------NQKKIAHL-RALQELGDLKIFGADLTDEES 73 (338)
T ss_pred CCcccCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC------CHHHHHHH-HhcCCCCceEEEEcCCCChHH
Confidence 44444556889999999999999999999999999987766321 11111111 11111 22345668887766
Q ss_pred HHHHHHHHHHHcCCccEEEecC
Q psy9143 79 GDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 79 ~~~~~~~~~~~~~~id~li~~A 100 (100)
+.+++. ++|+|||+|
T Consensus 74 ~~~~~~-------~~d~vih~A 88 (338)
T PLN00198 74 FEAPIA-------GCDLVFHVA 88 (338)
T ss_pred HHHHHh-------cCCEEEEeC
Confidence 555442 589999987
No 226
>KOG1502|consensus
Probab=99.23 E-value=1.2e-10 Score=74.88 Aligned_cols=79 Identities=23% Similarity=0.183 Sum_probs=58.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH---hcCCceeeeccCcccHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR---SKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~ 84 (100)
.++.++||||+|.||.++++.|+++|+.|..+.|.+. +++. .+....++ .+...+..|+.+..++.++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~------~~k~-~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPE------DEKK-TEHLRKLEGAKERLKLFKADLLDEGSFDKAID 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcc------hhhh-HHHHHhcccCcccceEEeccccccchHHHHHh
Confidence 5688999999999999999999999999999988432 1111 11233333 234556679999888777764
Q ss_pred HHHHHcCCccEEEecC
Q psy9143 85 TALENFGRIDIVINNA 100 (100)
Q Consensus 85 ~~~~~~~~id~li~~A 100 (100)
..|+|+|.|
T Consensus 78 -------gcdgVfH~A 86 (327)
T KOG1502|consen 78 -------GCDGVFHTA 86 (327)
T ss_pred -------CCCEEEEeC
Confidence 589999986
No 227
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.23 E-value=8.9e-11 Score=75.46 Aligned_cols=80 Identities=20% Similarity=0.178 Sum_probs=55.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHH--HHhcCCceeeeccCcccHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE--IRSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.+++++|||++|+||.+++++|+++|++|+++.|+.. .......+... .......+..|+++.+.+.++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 76 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT------DRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE- 76 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc------chHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-
Confidence 5789999999999999999999999999988776321 11122221110 01123445678888877666654
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
.+|++||+|
T Consensus 77 ------~~d~vih~A 85 (322)
T PLN02986 77 ------GCDAVFHTA 85 (322)
T ss_pred ------CCCEEEEeC
Confidence 489999987
No 228
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.21 E-value=5.5e-11 Score=73.23 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=51.7
Q ss_pred CEEEEecCCCchhHHHHHHHHHcC--CeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
++++|||+++|||++++++|+++| ..+++..++.. .. . .......+.+|+++.++++++ .
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~-------~~----~---~~~~~~~~~~Dls~~~~~~~~----~ 62 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHK-------PD----F---QHDNVQWHALDVTDEAEIKQL----S 62 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCc-------cc----c---ccCceEEEEecCCCHHHHHHH----H
Confidence 368999999999999999999985 45655544211 00 0 012334567899988877664 4
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
++++++|++||||
T Consensus 63 ~~~~~id~li~~a 75 (235)
T PRK09009 63 EQFTQLDWLINCV 75 (235)
T ss_pred HhcCCCCEEEECC
Confidence 5568999999997
No 229
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.19 E-value=1.2e-10 Score=78.89 Aligned_cols=80 Identities=18% Similarity=0.274 Sum_probs=61.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC-----CceeeeccCcccHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPDYNSVVDGD 80 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~ 80 (100)
++||+++||||+|+||.++++++++.+. ++++.++ ++.+......++.... ..+..|+.|.+.+.
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~---------~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~ 318 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSR---------DEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVE 318 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecC---------chHHHHHHHHHHHhhCCCcceEEEecccccHHHHH
Confidence 5899999999999999999999999986 5777766 6666667777776642 33455777777766
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++++.. ++|+++|.|
T Consensus 319 ~~~~~~-----kvd~VfHAA 333 (588)
T COG1086 319 RAMEGH-----KVDIVFHAA 333 (588)
T ss_pred HHHhcC-----CCceEEEhh
Confidence 666553 699999976
No 230
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.18 E-value=1.6e-10 Score=75.20 Aligned_cols=77 Identities=21% Similarity=0.124 Sum_probs=53.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh--cCCceeeeccCcccHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~ 85 (100)
.+++++|||++|.||.+++++|+++|++|+++++ .......+...+.. ....+.+|+.+.+.+.+++.
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR---------DPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK- 78 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-
Confidence 5678999999999999999999999999998876 22222223222221 22345568877765554442
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
.+|+|||+|
T Consensus 79 ------~~d~Vih~A 87 (353)
T PLN02896 79 ------GCDGVFHVA 87 (353)
T ss_pred ------CCCEEEECC
Confidence 589999987
No 231
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.18 E-value=1.4e-10 Score=74.32 Aligned_cols=80 Identities=21% Similarity=0.193 Sum_probs=54.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHH--HhcCCceeeeccCcccHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI--RSKGGKAVPDYNSVVDGDKIVQT 85 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~ 85 (100)
++++++||||+|.||.+++++|+++|++|+++.|+.. .......+.... ......+..|+.+.+.+.++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN------DPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD- 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC------chhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-
Confidence 4688999999999999999999999999988876321 111111111100 1123445678888877665553
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
.+|.|||+|
T Consensus 76 ------~~d~Vih~A 84 (322)
T PLN02662 76 ------GCEGVFHTA 84 (322)
T ss_pred ------CCCEEEEeC
Confidence 589999986
No 232
>PLN02214 cinnamoyl-CoA reductase
Probab=99.16 E-value=3.9e-10 Score=73.33 Aligned_cols=79 Identities=22% Similarity=0.176 Sum_probs=54.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---cCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 83 (100)
+++++++|||++|.||.+++++|+++|++|+++.|+... .. ......+.. ....+.+|+.+...+.+++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~-------~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 79 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD-------PK-NTHLRELEGGKERLILCKADLQDYEALKAAI 79 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh-------hh-HHHHHHhhCCCCcEEEEecCcCChHHHHHHH
Confidence 567899999999999999999999999999998773210 00 111112221 1234456888776665555
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
. .+|+|||+|
T Consensus 80 ~-------~~d~Vih~A 89 (342)
T PLN02214 80 D-------GCDGVFHTA 89 (342)
T ss_pred h-------cCCEEEEec
Confidence 3 589999986
No 233
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.13 E-value=3.3e-10 Score=73.74 Aligned_cols=85 Identities=18% Similarity=0.127 Sum_probs=55.7
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH----hcCCceeeeccCcccH
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR----SKGGKAVPDYNSVVDG 79 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~ 79 (100)
.+.+++++++||||+|.||..++++|+++|++|+++++.... ............. .....+..|+.+.+.+
T Consensus 10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l 84 (348)
T PRK15181 10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTG-----YQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDC 84 (348)
T ss_pred cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCc-----chhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 356778999999999999999999999999999999873221 1111111111111 1233456688776554
Q ss_pred HHHHHHHHHHcCCccEEEecC
Q psy9143 80 DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~A 100 (100)
.++++ .+|+|||.|
T Consensus 85 ~~~~~-------~~d~ViHlA 98 (348)
T PRK15181 85 QKACK-------NVDYVLHQA 98 (348)
T ss_pred HHHhh-------CCCEEEECc
Confidence 44442 489999986
No 234
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.11 E-value=7e-10 Score=73.37 Aligned_cols=86 Identities=16% Similarity=0.137 Sum_probs=58.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
++++++|||++|.||.++++.|+++|++|++++|+...... .......... ......+.+|++|.+.+.++++..
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~---~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~- 133 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRG---KNGKEDTKKE-LPGAEVVFGDVTDADSLRKVLFSE- 133 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccc---cchhhHHhhh-cCCceEEEeeCCCHHHHHHHHHHh-
Confidence 56789999999999999999999999999999874321100 0001111111 123456678999988887777543
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
..++|+||||+
T Consensus 134 --~~~~D~Vi~~a 144 (390)
T PLN02657 134 --GDPVDVVVSCL 144 (390)
T ss_pred --CCCCcEEEECC
Confidence 12699999975
No 235
>PLN02650 dihydroflavonol-4-reductase
Probab=99.11 E-value=5.8e-10 Score=72.55 Aligned_cols=77 Identities=19% Similarity=0.100 Sum_probs=53.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH-----hcCCceeeeccCcccHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-----SKGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~ 82 (100)
..++++||||+|.||.+++++|+++|++|++++|+. ........... .....+..|+.+.+.+.++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~ 74 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDP---------ANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDA 74 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCc---------chhHHHHHHHhccCCCCceEEEEecCCChhhHHHH
Confidence 357899999999999999999999999999887632 11112111111 1123456688877766655
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
+. .+|.|||+|
T Consensus 75 ~~-------~~d~ViH~A 85 (351)
T PLN02650 75 IR-------GCTGVFHVA 85 (351)
T ss_pred Hh-------CCCEEEEeC
Confidence 53 489999986
No 236
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.08 E-value=2e-10 Score=73.02 Aligned_cols=75 Identities=25% Similarity=0.343 Sum_probs=50.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCC--ce-------eeeccCcccHHH
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KA-------VPDYNSVVDGDK 81 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~d~~~~~~~~~ 81 (100)
++||||+|+||.++++++++.+. .++++++ ++..+-.+..++..... .+ ..|+.|.+.+..
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~---------~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~ 71 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDR---------DENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNR 71 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES----------HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCC---------ChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHH
Confidence 68999999999999999999985 6898887 77777777777743221 11 335555554454
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
++++. ++|+++|.|
T Consensus 72 ~~~~~-----~pdiVfHaA 85 (293)
T PF02719_consen 72 IFEEY-----KPDIVFHAA 85 (293)
T ss_dssp HTT-------T-SEEEE--
T ss_pred HHhhc-----CCCEEEECh
Confidence 44432 799999976
No 237
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.08 E-value=1.2e-09 Score=70.55 Aligned_cols=79 Identities=20% Similarity=0.189 Sum_probs=53.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH-hcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
+++||||+|+||.++++.|+++|++|+++++..++ .......+ ..+. .....+..|+.+.+.+.+++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 71 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNS-----KRSVLPVI-ERLGGKHPTFVEGDIRNEALLTEILHD---- 71 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCc-----hHhHHHHH-HHhcCCCceEEEccCCCHHHHHHHHhc----
Confidence 48999999999999999999999999988653211 11111111 1111 1233456788887776666543
Q ss_pred cCCccEEEecC
Q psy9143 90 FGRIDIVINNA 100 (100)
Q Consensus 90 ~~~id~li~~A 100 (100)
.++|+|||+|
T Consensus 72 -~~~d~vvh~a 81 (338)
T PRK10675 72 -HAIDTVIHFA 81 (338)
T ss_pred -CCCCEEEECC
Confidence 3699999986
No 238
>PLN02686 cinnamoyl-CoA reductase
Probab=99.06 E-value=1.7e-09 Score=71.06 Aligned_cols=79 Identities=15% Similarity=0.095 Sum_probs=52.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh---------cCCceeeeccC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---------KGGKAVPDYNS 75 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~~~ 75 (100)
...+++.++|||++|+||.+++++|+++|++|+++.+ +....+.+. .+.. ....+..|++|
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r---------~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d 118 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVD---------TQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTE 118 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHH-HHhhhccccccCCceEEEEcCCCC
Confidence 3457899999999999999999999999999988765 222222221 2111 12344568888
Q ss_pred cccHHHHHHHHHHHcCCccEEEecC
Q psy9143 76 VVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 76 ~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
.+.+.++++. +|.+||.|
T Consensus 119 ~~~l~~~i~~-------~d~V~hlA 136 (367)
T PLN02686 119 PESLHEAFDG-------CAGVFHTS 136 (367)
T ss_pred HHHHHHHHHh-------ccEEEecC
Confidence 7776666643 45666543
No 239
>PLN02427 UDP-apiose/xylose synthase
Probab=99.05 E-value=8.1e-10 Score=72.76 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=50.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHc-CCeEEEEcCCCCCCCCCCChHHHHHHHHH----HHhcCCceeeeccCcccHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAE----IRSKGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~ 82 (100)
+.++++||||+|.||..++++|+++ |+.|++++++ ......+... +......+..|+.|...+.++
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~---------~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~ 83 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVY---------NDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGL 83 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecC---------chhhhhhhccccccCCCCeEEEEcCCCChHHHHHH
Confidence 3457999999999999999999998 5899988762 1222221110 011234455678776655544
Q ss_pred HHHHHHHcCCccEEEecC
Q psy9143 83 VQTALENFGRIDIVINNA 100 (100)
Q Consensus 83 ~~~~~~~~~~id~li~~A 100 (100)
+. .+|+|||+|
T Consensus 84 ~~-------~~d~ViHlA 94 (386)
T PLN02427 84 IK-------MADLTINLA 94 (386)
T ss_pred hh-------cCCEEEEcc
Confidence 42 479999986
No 240
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.02 E-value=1e-09 Score=71.38 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=51.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEE-EEcCCCCCCCCCCChHHHHHHHHHH-HhcCCceeeeccCcccHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVV-VNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
+.++||||+|+||.++++.|+++|+.++ +.++.. .......+.... ......+.+|+.|.+++.++++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 72 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLT-------YAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTE-- 72 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCc-------cccchhhhhhcccCCceEEEECCCcChHHHHHHHhh--
Confidence 5799999999999999999999998754 444311 111111111100 11233456788888777777654
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
.++|+|||+|
T Consensus 73 ---~~~D~Vih~A 82 (355)
T PRK10217 73 ---HQPDCVMHLA 82 (355)
T ss_pred ---cCCCEEEECC
Confidence 2699999997
No 241
>PLN02583 cinnamoyl-CoA reductase
Probab=99.00 E-value=3.8e-09 Score=67.49 Aligned_cols=79 Identities=10% Similarity=-0.065 Sum_probs=50.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH---hcCCceeeeccCcccHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR---SKGGKAVPDYNSVVDGDKI 82 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~ 82 (100)
+-.+++++|||++|+||.+++++|+++|++|+++.|+. ...........+. .....+..|++|.+.+.++
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~-------~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~ 75 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN-------GETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA 75 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc-------hhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH
Confidence 34578999999999999999999999999999887621 1111212222221 1223455688777665444
Q ss_pred HHHHHHHcCCccEEEe
Q psy9143 83 VQTALENFGRIDIVIN 98 (100)
Q Consensus 83 ~~~~~~~~~~id~li~ 98 (100)
+ ...+.++|
T Consensus 76 l-------~~~d~v~~ 84 (297)
T PLN02583 76 L-------KGCSGLFC 84 (297)
T ss_pred H-------cCCCEEEE
Confidence 3 24666665
No 242
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.99 E-value=2.3e-09 Score=71.13 Aligned_cols=75 Identities=24% Similarity=0.326 Sum_probs=53.5
Q ss_pred CCCCCEEEEecC---------------CCc-hhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCce
Q psy9143 6 RFDGRVAIVTGA---------------GAG-LGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69 (100)
Q Consensus 6 ~~~~~~~litG~---------------~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (100)
++++++++|||| ++| +|.++++.|+++|++|++++++.. .+ .. ....
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~----------~~-----~~--~~~~ 247 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN----------LP-----TP--AGVK 247 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc----------cc-----CC--CCcE
Confidence 468999999999 455 999999999999999999876321 00 00 1123
Q ss_pred eeeccCcccHHHHHHHHHHHcCCccEEEecC
Q psy9143 70 VPDYNSVVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 70 ~~d~~~~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
.+|+++.++ ..+.+.+.++++|++||||
T Consensus 248 ~~dv~~~~~---~~~~v~~~~~~~DilI~~A 275 (399)
T PRK05579 248 RIDVESAQE---MLDAVLAALPQADIFIMAA 275 (399)
T ss_pred EEccCCHHH---HHHHHHHhcCCCCEEEEcc
Confidence 456665544 4444556678999999997
No 243
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.99 E-value=4.3e-09 Score=65.70 Aligned_cols=77 Identities=22% Similarity=0.227 Sum_probs=50.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
++++++|||++|+||..++++|+++|++|+++.| ........... ......+..|+.+. ...+.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~~~~-~~~~~~~~~Dl~d~--~~~l~---- 79 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVR---------DVDKAKTSLPQ-DPSLQIVRADVTEG--SDKLV---- 79 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEec---------CHHHHHHhccc-CCceEEEEeeCCCC--HHHHH----
Confidence 5688999999999999999999999999988876 33332222111 11233455677763 12222
Q ss_pred HHc-CCccEEEecC
Q psy9143 88 ENF-GRIDIVINNA 100 (100)
Q Consensus 88 ~~~-~~id~li~~A 100 (100)
+.+ ..+|++|+|+
T Consensus 80 ~~~~~~~d~vi~~~ 93 (251)
T PLN00141 80 EAIGDDSDAVICAT 93 (251)
T ss_pred HHhhcCCCEEEECC
Confidence 223 3689999874
No 244
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.98 E-value=2.5e-09 Score=68.18 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=51.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcC--CeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
+++|||++|+||.+++++|++.| ++|++.++.... ......+.+.. ......+.+|+++++++.++++..
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-- 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYA----GNLENLADLED--NPRYRFVKGDIGDRELVSRLFTEH-- 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcc----hhhhhhhhhcc--CCCcEEEEcCCcCHHHHHHHHhhc--
Confidence 38999999999999999999987 678877652110 01111111110 112344567888888777766542
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
++|+|||+|
T Consensus 73 ---~~d~vi~~a 81 (317)
T TIGR01181 73 ---QPDAVVHFA 81 (317)
T ss_pred ---CCCEEEEcc
Confidence 589999986
No 245
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.98 E-value=4.6e-09 Score=65.02 Aligned_cols=72 Identities=17% Similarity=0.172 Sum_probs=54.3
Q ss_pred EEEEe-cCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 11 VAIVT-GAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 11 ~~lit-G~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
+=+|| .++||||.++|+.|+++|++|+++++. ... .. .....+|+.+.+++.++++.+.+.
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~----------~~l-------~~-~~~~~~Dv~d~~s~~~l~~~v~~~ 77 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTK----------RAL-------KP-EPHPNLSIREIETTKDLLITLKEL 77 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcCh----------hhc-------cc-ccCCcceeecHHHHHHHHHHHHHH
Confidence 33444 446789999999999999999998641 000 00 012347888999999999999899
Q ss_pred cCCccEEEecC
Q psy9143 90 FGRIDIVINNA 100 (100)
Q Consensus 90 ~~~id~li~~A 100 (100)
++++|++||||
T Consensus 78 ~g~iDiLVnnA 88 (227)
T TIGR02114 78 VQEHDILIHSM 88 (227)
T ss_pred cCCCCEEEECC
Confidence 99999999997
No 246
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.97 E-value=3.1e-09 Score=67.58 Aligned_cols=74 Identities=20% Similarity=0.114 Sum_probs=56.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
++|||||+|-||++++.+|++.|+.|++.|... ....+.+... . ..++..|+.|..-++++|++.
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~--------~g~~~~v~~~-~--~~f~~gDi~D~~~L~~vf~~~---- 66 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLS--------NGHKIALLKL-Q--FKFYEGDLLDRALLTAVFEEN---- 66 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCC--------CCCHHHhhhc-c--CceEEeccccHHHHHHHHHhc----
Confidence 589999999999999999999999999998632 2222222211 1 567888999888777777654
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
+||.+||.|
T Consensus 67 -~idaViHFA 75 (329)
T COG1087 67 -KIDAVVHFA 75 (329)
T ss_pred -CCCEEEECc
Confidence 799999976
No 247
>KOG1371|consensus
Probab=98.96 E-value=3.9e-09 Score=67.62 Aligned_cols=82 Identities=23% Similarity=0.236 Sum_probs=60.1
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH--hcCCceeeeccCcccHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
++++|+|||+|-||.+.+-+|+++|+.|+++|.-.++ ....+...+.... +...+...|+.|.+.++++|++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~-----~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~ 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNS-----YLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEeccccc-----chhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc
Confidence 5789999999999999999999999999999753221 2344444443333 33455667888888888887665
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
++|.|+|-|
T Consensus 77 -----~fd~V~Hfa 85 (343)
T KOG1371|consen 77 -----KFDAVMHFA 85 (343)
T ss_pred -----CCceEEeeh
Confidence 588888754
No 248
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.95 E-value=3.3e-09 Score=67.82 Aligned_cols=77 Identities=27% Similarity=0.227 Sum_probs=51.5
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHcC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENFG 91 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 91 (100)
++|||++|+||..++++|+++|++|++.++.... ......... .. .....+.+|+.+.+++.+++.. +
T Consensus 2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~-----~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~-----~ 69 (328)
T TIGR01179 2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNG-----SPEALKRGE-RI-TRVTFVEGDLRDRELLDRLFEE-----H 69 (328)
T ss_pred EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCcc-----chhhhhhhc-cc-cceEEEECCCCCHHHHHHHHHh-----C
Confidence 7999999999999999999999999887642110 111111110 00 0223456788888777766653 4
Q ss_pred CccEEEecC
Q psy9143 92 RIDIVINNA 100 (100)
Q Consensus 92 ~id~li~~A 100 (100)
++|++||||
T Consensus 70 ~~d~vv~~a 78 (328)
T TIGR01179 70 KIDAVIHFA 78 (328)
T ss_pred CCcEEEECc
Confidence 799999986
No 249
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.92 E-value=5e-09 Score=64.28 Aligned_cols=73 Identities=23% Similarity=0.315 Sum_probs=54.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHcC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENFG 91 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 91 (100)
|+||||+|.||.+++++|+++|+.|+.+.+.. ....... .......+..|+.+.+.++++++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~-------~~~~~~~----~~~~~~~~~~dl~~~~~~~~~~~~~----- 64 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSS-------NSESFEE----KKLNVEFVIGDLTDKEQLEKLLEKA----- 64 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCS-------TGGHHHH----HHTTEEEEESETTSHHHHHHHHHHH-----
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccc-------ccccccc----ccceEEEEEeecccccccccccccc-----
Confidence 68999999999999999999999988776632 1111111 1114456678999888888888765
Q ss_pred CccEEEecC
Q psy9143 92 RIDIVINNA 100 (100)
Q Consensus 92 ~id~li~~A 100 (100)
.+|.+||+|
T Consensus 65 ~~d~vi~~a 73 (236)
T PF01370_consen 65 NIDVVIHLA 73 (236)
T ss_dssp TESEEEEEB
T ss_pred CceEEEEee
Confidence 799999875
No 250
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.91 E-value=7.9e-09 Score=61.45 Aligned_cols=68 Identities=25% Similarity=0.161 Sum_probs=49.3
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHcC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENFG 91 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 91 (100)
|+|+||+|.+|..++++|+++|++|.++.| ++.+.+. ......+..|+.|++.+.+.+ .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R---------~~~~~~~-----~~~~~~~~~d~~d~~~~~~al-------~ 59 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVR---------SPSKAED-----SPGVEIIQGDLFDPDSVKAAL-------K 59 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEES---------SGGGHHH-----CTTEEEEESCTTCHHHHHHHH-------T
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEec---------Cchhccc-----ccccccceeeehhhhhhhhhh-------h
Confidence 689999999999999999999999999988 4443333 333445556776664444333 3
Q ss_pred CccEEEecC
Q psy9143 92 RIDIVINNA 100 (100)
Q Consensus 92 ~id~li~~A 100 (100)
+.|.+|+++
T Consensus 60 ~~d~vi~~~ 68 (183)
T PF13460_consen 60 GADAVIHAA 68 (183)
T ss_dssp TSSEEEECC
T ss_pred hcchhhhhh
Confidence 688888764
No 251
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.89 E-value=8.2e-09 Score=67.09 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=50.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCe-EEEEcCCCCCCCCCCChHHHHHHHHHHH--hcCCceeeeccCcccHHHHHHHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
.++||||+|+||.+++++|+++|+. ++.+++.. .....+.+. .+. .....+.+|++|.+++.+++.+
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 71 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT-------YAGNLESLA-DVSDSERYVFEHADICDRAELDRIFAQ-- 71 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCC-------ccchHHHHH-hcccCCceEEEEecCCCHHHHHHHHHh--
Confidence 4899999999999999999999976 44444311 001111111 111 1223456799988877777754
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
..+|+|||+|
T Consensus 72 ---~~~d~vih~A 81 (352)
T PRK10084 72 ---HQPDAVMHLA 81 (352)
T ss_pred ---cCCCEEEECC
Confidence 2699999987
No 252
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.88 E-value=4e-09 Score=67.59 Aligned_cols=71 Identities=21% Similarity=0.108 Sum_probs=50.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
+++|||++|+||..+++.|+++|++|++++|+... ...+. ......+.+|+.+.+.+.++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~---~~~~~~~~~D~~~~~~l~~~~~------ 63 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD---------RRNLE---GLDVEIVEGDLRDPASLRKAVA------ 63 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc---------ccccc---cCCceEEEeeCCCHHHHHHHHh------
Confidence 58999999999999999999999999999874221 11110 1123455678887765555442
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
.+|++||+|
T Consensus 64 -~~d~vi~~a 72 (328)
T TIGR03466 64 -GCRALFHVA 72 (328)
T ss_pred -CCCEEEEec
Confidence 578999875
No 253
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.88 E-value=1.3e-08 Score=65.57 Aligned_cols=71 Identities=15% Similarity=0.087 Sum_probs=49.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
+++||||+|.+|.+++++|+++|++|.+++|+ ......+. ......+..|+.|++++.++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~---------~~~~~~l~---~~~v~~v~~Dl~d~~~l~~al~------ 63 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRN---------LRKASFLK---EWGAELVYGDLSLPETLPPSFK------ 63 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC---------hHHhhhHh---hcCCEEEECCCCCHHHHHHHHC------
Confidence 59999999999999999999999999999873 22211111 1123455668877766554442
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
.+|++||++
T Consensus 64 -g~d~Vi~~~ 72 (317)
T CHL00194 64 -GVTAIIDAS 72 (317)
T ss_pred -CCCEEEECC
Confidence 578888763
No 254
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.86 E-value=4.4e-08 Score=62.63 Aligned_cols=81 Identities=20% Similarity=0.253 Sum_probs=52.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCe-EEEEcCCCCCCCCCCChHHHHHHHHHHHhcCC---ceeeeccCcccHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPDYNSVVDGDK 81 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~ 81 (100)
.+++++++|+|+ ||+|++++..|++.|++ |++++|+.. ..++.+++.+++..... ...+|+.+.+++..
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~------~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~ 195 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDD------FYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKA 195 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCch------HHHHHHHHHHHHhhcCCCceeEEechhhhhHHHh
Confidence 456899999999 79999999999999986 999887310 01445555555544322 22345544333322
Q ss_pred HHHHHHHHcCCccEEEecC
Q psy9143 82 IVQTALENFGRIDIVINNA 100 (100)
Q Consensus 82 ~~~~~~~~~~~id~li~~A 100 (100)
. ....|+||||.
T Consensus 196 ~-------~~~~DilINaT 207 (289)
T PRK12548 196 E-------IASSDILVNAT 207 (289)
T ss_pred h-------hccCCEEEEeC
Confidence 2 23469999873
No 255
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.81 E-value=1.6e-08 Score=64.66 Aligned_cols=73 Identities=18% Similarity=0.310 Sum_probs=45.7
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHH--H
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALE--N 89 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~ 89 (100)
++||||+|.||.+++++|+++|+.++++.++.. ... ... . ...+|+.|..+.+.++..+.+ .
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~------~~~---~~~-~------~~~~~~~d~~~~~~~~~~~~~~~~ 65 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK------DGT---KFV-N------LVDLDIADYMDKEDFLAQIMAGDD 65 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCC------cch---HHH-h------hhhhhhhhhhhHHHHHHHHhcccc
Confidence 799999999999999999999986555543211 000 000 1 122455555555555544432 2
Q ss_pred cCCccEEEecC
Q psy9143 90 FGRIDIVINNA 100 (100)
Q Consensus 90 ~~~id~li~~A 100 (100)
++++|+|||+|
T Consensus 66 ~~~~d~Vih~A 76 (308)
T PRK11150 66 FGDIEAIFHEG 76 (308)
T ss_pred cCCccEEEECc
Confidence 35799999986
No 256
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.80 E-value=1.5e-07 Score=56.82 Aligned_cols=78 Identities=23% Similarity=0.346 Sum_probs=53.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC--CceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~ 83 (100)
.+++++++|+|++|++|..+++.|++.|++|++++| +.++.+.+.+.+.... ....+|..+.+++...+
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R---------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 95 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR---------DLERAQKAADSLRARFGEGVGAVETSDDAARAAAI 95 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH
Confidence 467899999999999999999999999999999876 5556666665554321 22233444444333333
Q ss_pred HHHHHHcCCccEEEec
Q psy9143 84 QTALENFGRIDIVINN 99 (100)
Q Consensus 84 ~~~~~~~~~id~li~~ 99 (100)
.+.|++|++
T Consensus 96 -------~~~diVi~a 104 (194)
T cd01078 96 -------KGADVVFAA 104 (194)
T ss_pred -------hcCCEEEEC
Confidence 256777765
No 257
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.80 E-value=1.7e-08 Score=64.61 Aligned_cols=61 Identities=20% Similarity=0.291 Sum_probs=44.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
++|||||+|.||.++++.|.++| +|+.+++.. .....|+.|.+.+.++++..
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~-----------------------~~~~~Dl~d~~~~~~~~~~~---- 53 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHS-----------------------TDYCGDFSNPEGVAETVRKI---- 53 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEecccc-----------------------ccccCCCCCHHHHHHHHHhc----
Confidence 59999999999999999999999 788776521 01234777666665555432
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
++|+|||+|
T Consensus 54 -~~D~Vih~A 62 (299)
T PRK09987 54 -RPDVIVNAA 62 (299)
T ss_pred -CCCEEEECC
Confidence 578888876
No 258
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.77 E-value=2.4e-08 Score=63.14 Aligned_cols=30 Identities=33% Similarity=0.453 Sum_probs=28.4
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++|||++|.||.+++++|.++|++|++++|
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r 31 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTS 31 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCC
Confidence 799999999999999999999999998876
No 259
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.76 E-value=1.3e-08 Score=64.73 Aligned_cols=72 Identities=24% Similarity=0.237 Sum_probs=50.0
Q ss_pred EEecCCCchhHHHHHHHHHcC--CeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 13 IVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 13 litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
|||||+|.+|.+++++|+++| +.|.++++... ...... .... .....+..|++|.+++.++++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~-------~~~~~~-~~~~-~~~~~~~~Di~d~~~l~~a~~------ 65 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPP-------PKFLKD-LQKS-GVKEYIQGDITDPESLEEALE------ 65 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccc-------cccchh-hhcc-cceeEEEeccccHHHHHHHhc------
Confidence 699999999999999999999 67888876321 111111 1111 111266789999888777664
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
..|++||+|
T Consensus 66 -g~d~V~H~A 74 (280)
T PF01073_consen 66 -GVDVVFHTA 74 (280)
T ss_pred -CCceEEEeC
Confidence 579999986
No 260
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.75 E-value=9.1e-08 Score=62.01 Aligned_cols=32 Identities=28% Similarity=0.225 Sum_probs=28.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcC--CeEEEEcCC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLG 42 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~ 42 (100)
+++||||+|+||.+++++|+++| ++|+++.|+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~ 34 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRA 34 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 48999999999999999999998 679988873
No 261
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.72 E-value=5.7e-08 Score=63.96 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=31.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+++.++|||++|.||.++++.|.++|+.|++++|
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEe
Confidence 5688999999999999999999999999999987
No 262
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.71 E-value=5.9e-08 Score=68.08 Aligned_cols=82 Identities=17% Similarity=0.095 Sum_probs=52.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHc--CCeEEEEcCCCCCCCCCCChHHHHHHHHHH-HhcCCceeeeccCcccHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~ 83 (100)
.++++++||||+|.||.+++++|+++ +++|+++++... ......+.... ......+..|+.|.+.+..++
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-------~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~ 76 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-------CSNLKNLNPSKSSPNFKFVKGDIASADLVNYLL 76 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-------cchhhhhhhcccCCCeEEEECCCCChHHHHHHH
Confidence 35689999999999999999999998 578888875210 11111111100 112334556887765544433
Q ss_pred HHHHHHcCCccEEEecC
Q psy9143 84 QTALENFGRIDIVINNA 100 (100)
Q Consensus 84 ~~~~~~~~~id~li~~A 100 (100)
.. ..+|+|||+|
T Consensus 77 ~~-----~~~D~ViHlA 88 (668)
T PLN02260 77 IT-----EGIDTIMHFA 88 (668)
T ss_pred hh-----cCCCEEEECC
Confidence 21 3799999987
No 263
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.71 E-value=9.5e-08 Score=63.37 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=52.6
Q ss_pred CCCCCEEEEecC---------------CCc-hhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCce
Q psy9143 6 RFDGRVAIVTGA---------------GAG-LGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69 (100)
Q Consensus 6 ~~~~~~~litG~---------------~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (100)
+++++.++|||| ++| +|.++++.|..+|++|+++.++.. .. .. ....
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~--------~~-------~~--~~~~ 244 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVS--------LL-------TP--PGVK 244 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCc--------cC-------CC--CCcE
Confidence 478999999999 566 999999999999999998875321 00 01 1123
Q ss_pred eeeccCcccH-HHHHHHHHHHcCCccEEEecC
Q psy9143 70 VPDYNSVVDG-DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 70 ~~d~~~~~~~-~~~~~~~~~~~~~id~li~~A 100 (100)
.+|+.+.++. +.++++ ..+.+|++|+||
T Consensus 245 ~~~v~~~~~~~~~~~~~---~~~~~D~~i~~A 273 (390)
T TIGR00521 245 SIKVSTAEEMLEAALNE---LAKDFDIFISAA 273 (390)
T ss_pred EEEeccHHHHHHHHHHh---hcccCCEEEEcc
Confidence 4677666665 434433 346899999997
No 264
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.69 E-value=9.2e-08 Score=61.11 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=45.0
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
++|||++|.||.++++.|.++|+ .|+++++.. ....... +.. .....|+.+.+.++.+.+. .+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~-------~~~~~~~----~~~--~~~~~d~~~~~~~~~~~~~---~~ 64 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR-------DGHKFLN----LAD--LVIADYIDKEDFLDRLEKG---AF 64 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC-------Cchhhhh----hhh--eeeeccCcchhHHHHHHhh---cc
Confidence 58999999999999999999998 687776521 1111111 111 1223344444333333221 34
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
.++|+|||+|
T Consensus 65 ~~~D~vvh~A 74 (314)
T TIGR02197 65 GKIEAIFHQG 74 (314)
T ss_pred CCCCEEEECc
Confidence 5899999987
No 265
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.69 E-value=7.1e-08 Score=62.76 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=28.8
Q ss_pred CEEEEecCCCchhHHHHHHHHHc-CCeEEEEcC
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAER-GASVVVNDL 41 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~ 41 (100)
++++||||+|.||..++++|++. |++|++++|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r 34 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDM 34 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeC
Confidence 36999999999999999999986 689998876
No 266
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.67 E-value=7.1e-08 Score=67.70 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=49.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHc-CCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
.+++++||||+|.||.+++++|+++ |++|+.++|.. ........ ......+..|+++... .+..+
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~---------~~~~~~~~--~~~~~~~~gDl~d~~~---~l~~~ 379 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGS---------DAISRFLG--HPRFHFVEGDISIHSE---WIEYH 379 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCc---------hhhhhhcC--CCceEEEeccccCcHH---HHHHH
Confidence 5678999999999999999999986 79999998731 11111110 0123344557776443 22222
Q ss_pred HHHcCCccEEEecC
Q psy9143 87 LENFGRIDIVINNA 100 (100)
Q Consensus 87 ~~~~~~id~li~~A 100 (100)
. ..+|+|||+|
T Consensus 380 l---~~~D~ViHlA 390 (660)
T PRK08125 380 I---KKCDVVLPLV 390 (660)
T ss_pred h---cCCCEEEECc
Confidence 2 2689999976
No 267
>PRK05865 hypothetical protein; Provisional
Probab=98.66 E-value=8.7e-08 Score=68.69 Aligned_cols=68 Identities=24% Similarity=0.204 Sum_probs=51.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
.++|||++|.||.+++++|+++|++|++++++.. .. .......+.+|+.+.+.+.++++
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~--------~~-------~~~~v~~v~gDL~D~~~l~~al~------ 60 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRP--------DS-------WPSSADFIAADIRDATAVESAMT------ 60 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCch--------hh-------cccCceEEEeeCCCHHHHHHHHh------
Confidence 5899999999999999999999999999887311 00 11223456778888776665553
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
.+|++||+|
T Consensus 61 -~vD~VVHlA 69 (854)
T PRK05865 61 -GADVVAHCA 69 (854)
T ss_pred -CCCEEEECC
Confidence 589999986
No 268
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.65 E-value=7.6e-08 Score=61.40 Aligned_cols=58 Identities=31% Similarity=0.366 Sum_probs=41.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
+++|||++|-||.++.+.|.++|+.++.+++. .+|+.|.+.+.+++.+.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------------~~dl~d~~~~~~~~~~~---- 50 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------------DLDLTDPEAVAKLLEAF---- 50 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------------CS-TTSHHHHHHHHHHH----
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------------hcCCCCHHHHHHHHHHh----
Confidence 58999999999999999999999999988651 45666666555555544
Q ss_pred CCccEEEecC
Q psy9143 91 GRIDIVINNA 100 (100)
Q Consensus 91 ~~id~li~~A 100 (100)
++|+|||+|
T Consensus 51 -~pd~Vin~a 59 (286)
T PF04321_consen 51 -KPDVVINCA 59 (286)
T ss_dssp ---SEEEE--
T ss_pred -CCCeEeccc
Confidence 477777765
No 269
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.62 E-value=2.2e-07 Score=61.39 Aligned_cols=74 Identities=28% Similarity=0.325 Sum_probs=56.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHcC-CeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
+.++|.|+ |++|+.+++.|+++| .+|.+.+| +.++..++......+....++|..+.+.+.+++++
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdR---------s~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~--- 68 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADR---------SKEKCARIAELIGGKVEALQVDAADVDALVALIKD--- 68 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeC---------CHHHHHHHHhhccccceeEEecccChHHHHHHHhc---
Confidence 45899999 999999999999999 79999987 66666666554444566677888877766655543
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
.|++||++
T Consensus 69 ----~d~VIn~~ 76 (389)
T COG1748 69 ----FDLVINAA 76 (389)
T ss_pred ----CCEEEEeC
Confidence 38888864
No 270
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.62 E-value=7e-08 Score=61.17 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=30.0
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGG 43 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 43 (100)
++||||+|.+|..++++|+++|++|.++.|++
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~ 33 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSS 33 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCC
Confidence 79999999999999999999999999998854
No 271
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.9e-07 Score=65.26 Aligned_cols=79 Identities=24% Similarity=0.142 Sum_probs=49.9
Q ss_pred EEEEecCCCchhHHHHHHHH--HcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH-hcCCceeeeccCccc--HHHHHHH
Q psy9143 11 VAIVTGAGAGLGRSYALLLA--ERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPDYNSVVD--GDKIVQT 85 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~--~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~--~~~~~~~ 85 (100)
+++||||+|.||.+++++|+ ..|++|++++|+. .......+...+. .....+..|+.++.. ....+..
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~-------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~ 74 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQ-------SLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE 74 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcc-------hHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH
Confidence 59999999999999999999 5789999998721 1222222222211 123344567776532 1122222
Q ss_pred HHHHcCCccEEEecC
Q psy9143 86 ALENFGRIDIVINNA 100 (100)
Q Consensus 86 ~~~~~~~id~li~~A 100 (100)
+ .++|++||+|
T Consensus 75 l----~~~D~Vih~A 85 (657)
T PRK07201 75 L----GDIDHVVHLA 85 (657)
T ss_pred h----cCCCEEEECc
Confidence 2 4799999986
No 272
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.58 E-value=9e-07 Score=50.73 Aligned_cols=47 Identities=28% Similarity=0.478 Sum_probs=41.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCe-EEEEcCCCCCCCCCCChHHHHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEI 62 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (100)
+++++.++|.|+ ||.|.++++.|...|++ |.++.| +.++++++.+.+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nR---------t~~ra~~l~~~~ 56 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNR---------TPERAEALAEEF 56 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEES---------SHHHHHHHHHHH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEEC---------CHHHHHHHHHHc
Confidence 578999999998 99999999999999986 888876 777888887776
No 273
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.56 E-value=2.2e-07 Score=59.18 Aligned_cols=31 Identities=26% Similarity=0.180 Sum_probs=29.5
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++|||++|.||.+++++|.++|+.|..+++.
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~ 33 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRL 33 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCC
Confidence 8999999999999999999999999999874
No 274
>PLN02778 3,5-epimerase/4-reductase
Probab=98.55 E-value=5.6e-07 Score=57.72 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=28.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEE
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVN 39 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~ 39 (100)
.+.++||||+|.||.++++.|+++|++|+..
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence 4679999999999999999999999998754
No 275
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.55 E-value=1e-07 Score=60.67 Aligned_cols=28 Identities=21% Similarity=0.211 Sum_probs=25.0
Q ss_pred EEecCCCchhHHHHHHHHHcCCeEEEEc
Q psy9143 13 IVTGAGAGLGRSYALLLAERGASVVVND 40 (100)
Q Consensus 13 litG~~~gig~~~~~~l~~~g~~v~~~~ 40 (100)
+||||+|.||..+++.|++.|+.+++..
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~ 28 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLR 28 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEee
Confidence 6899999999999999999998877653
No 276
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.52 E-value=3.3e-07 Score=58.25 Aligned_cols=56 Identities=27% Similarity=0.340 Sum_probs=48.0
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHcC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENFG 91 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 91 (100)
++|||++|-+|.++++.|. .++.|+.+++. . +|++|++.+.+++.+.
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~---------~------------------~Ditd~~~v~~~i~~~----- 49 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRA---------E------------------LDITDPDAVLEVIRET----- 49 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCc---------c------------------ccccChHHHHHHHHhh-----
Confidence 8999999999999999999 66889887651 1 8889998888888776
Q ss_pred CccEEEecC
Q psy9143 92 RIDIVINNA 100 (100)
Q Consensus 92 ~id~li~~A 100 (100)
++|+|||+|
T Consensus 50 ~PDvVIn~A 58 (281)
T COG1091 50 RPDVVINAA 58 (281)
T ss_pred CCCEEEECc
Confidence 799999987
No 277
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.49 E-value=7.8e-07 Score=56.85 Aligned_cols=80 Identities=16% Similarity=0.094 Sum_probs=54.7
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCC--eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
+.+|||||+|.||.++++.+.++.. +|+.++. ...+-+...+..+.. ..+..+++.|++|.+.+.+++.+.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk----LTYAgn~~~l~~~~~--~~~~~fv~~DI~D~~~v~~~~~~~- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK----LTYAGNLENLADVED--SPRYRFVQGDICDRELVDRLFKEY- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec----ccccCCHHHHHhhhc--CCCceEEeccccCHHHHHHHHHhc-
Confidence 3589999999999999999999864 4666653 111223333322211 135678888999988777777654
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
++|+++|-|
T Consensus 74 ----~~D~VvhfA 82 (340)
T COG1088 74 ----QPDAVVHFA 82 (340)
T ss_pred ----CCCeEEEec
Confidence 689998865
No 278
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.48 E-value=1.3e-06 Score=60.85 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=31.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC---eEEEEcCC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA---SVVVNDLG 42 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~ 42 (100)
+++++++||||+|.||..+++.|++.+. +|+++.|.
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~ 155 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKA 155 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 4789999999999999999999998753 67888774
No 279
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.47 E-value=6.5e-07 Score=60.37 Aligned_cols=34 Identities=35% Similarity=0.420 Sum_probs=31.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+++.++|||++|.||..++++|+++|++|+++++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~ 151 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN 151 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence 4678999999999999999999999999998875
No 280
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.45 E-value=9.1e-07 Score=59.57 Aligned_cols=33 Identities=30% Similarity=0.308 Sum_probs=30.8
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
..+++|||++|.||..++++|+++|++|+++++
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 457999999999999999999999999999876
No 281
>PLN00016 RNA-binding protein; Provisional
Probab=98.44 E-value=1.2e-06 Score=57.82 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=32.4
Q ss_pred CCCEEEEe----cCCCchhHHHHHHHHHcCCeEEEEcCCC
Q psy9143 8 DGRVAIVT----GAGAGLGRSYALLLAERGASVVVNDLGG 43 (100)
Q Consensus 8 ~~~~~lit----G~~~gig~~~~~~l~~~g~~v~~~~~~~ 43 (100)
..+.++|| ||+|.||..++++|+++|+.|++++|+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~ 90 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGK 90 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCC
Confidence 34679999 9999999999999999999999998853
No 282
>KOG1204|consensus
Probab=98.44 E-value=2.2e-08 Score=61.49 Aligned_cols=86 Identities=16% Similarity=0.175 Sum_probs=47.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
.++++++||+++|||..++..+...+-.......+ +.....+.+.............|++...-..+.++..+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~-------r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r 77 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVA-------RLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPR 77 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhh-------cccccccceEEEecCCcceechHHHHHHHHHHHHhhhh
Confidence 46889999999999988888877765432222110 00000111110000011111224444444566666667
Q ss_pred HHcCCccEEEecC
Q psy9143 88 ENFGRIDIVINNA 100 (100)
Q Consensus 88 ~~~~~id~li~~A 100 (100)
++.+..+++||||
T Consensus 78 ~k~gkr~iiI~NA 90 (253)
T KOG1204|consen 78 KKGGKRDIIIHNA 90 (253)
T ss_pred hcCCceeEEEecC
Confidence 7888999999997
No 283
>PLN02996 fatty acyl-CoA reductase
Probab=98.44 E-value=1.9e-06 Score=58.87 Aligned_cols=37 Identities=14% Similarity=0.166 Sum_probs=31.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC---eEEEEcCCC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA---SVVVNDLGG 43 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~ 43 (100)
+++++++||||+|.||..+++.|++.+. +|+++.|+.
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~ 48 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAS 48 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 4789999999999999999999998643 578887753
No 284
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.39 E-value=6.7e-07 Score=56.53 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=29.6
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGG 43 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 43 (100)
++|||++|.||.++++.|+++|++|++++|+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 32 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSP 32 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCC
Confidence 58999999999999999999999999998853
No 285
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.35 E-value=5.1e-06 Score=55.98 Aligned_cols=35 Identities=34% Similarity=0.578 Sum_probs=31.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++++|.++|+|+++ +|.++++.|++.|++|+++++
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~ 36 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDE 36 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeC
Confidence 46789999999866 999999999999999999976
No 286
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.34 E-value=3.2e-06 Score=52.21 Aligned_cols=70 Identities=27% Similarity=0.251 Sum_probs=45.6
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC-CceeeeccCcccHHHHHHHHHHHc
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-GKAVPDYNSVVDGDKIVQTALENF 90 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~ 90 (100)
|+|+|++|.+|..+++.|++.+++|.++.|+. +.+.. ..+...+ ..+..|+.|.+++.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~-------~~~~~----~~l~~~g~~vv~~d~~~~~~l~~al------- 62 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP-------SSDRA----QQLQALGAEVVEADYDDPESLVAAL------- 62 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS-------HHHHH----HHHHHTTTEEEES-TT-HHHHHHHH-------
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEecc-------chhhh----hhhhcccceEeecccCCHHHHHHHH-------
Confidence 68999999999999999999999999998731 11222 2333333 33455666665554444
Q ss_pred CCccEEEec
Q psy9143 91 GRIDIVINN 99 (100)
Q Consensus 91 ~~id~li~~ 99 (100)
..+|.+|.+
T Consensus 63 ~g~d~v~~~ 71 (233)
T PF05368_consen 63 KGVDAVFSV 71 (233)
T ss_dssp TTCSEEEEE
T ss_pred cCCceEEee
Confidence 367777654
No 287
>PRK12320 hypothetical protein; Provisional
Probab=98.31 E-value=2.1e-06 Score=60.66 Aligned_cols=31 Identities=29% Similarity=0.261 Sum_probs=29.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+++||||+|.||.+++++|.++|++|+++++
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr 32 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQ 32 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 4999999999999999999999999999876
No 288
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.28 E-value=4.5e-06 Score=51.84 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=43.8
Q ss_pred CEEEEecCCCc-hhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAG-LGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 10 ~~~litG~~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
.+=+||..++| +|.++++.|+++|++|++++++... .. ........ .. .++.....+.+.+
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~----------~~---~~~~~v~~--i~---v~s~~~m~~~l~~ 77 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV----------KP---EPHPNLSI--IE---IENVDDLLETLEP 77 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc----------cC---CCCCCeEE--EE---EecHHHHHHHHHH
Confidence 34566755555 9999999999999999998752110 00 00001111 11 2333444445555
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
.++.+|++||||
T Consensus 78 ~~~~~DivIh~A 89 (229)
T PRK06732 78 LVKDHDVLIHSM 89 (229)
T ss_pred HhcCCCEEEeCC
Confidence 556899999997
No 289
>KOG1202|consensus
Probab=98.28 E-value=6.3e-06 Score=61.07 Aligned_cols=89 Identities=18% Similarity=0.288 Sum_probs=62.3
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccH---
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDG--- 79 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--- 79 (100)
.+....|.++|+|+-||+|++++++|.++|+ ++++++|.. ....--....+.+..++..+++|-.|....
T Consensus 1763 t~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsG------irtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga 1836 (2376)
T KOG1202|consen 1763 TYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSG------IRTGYQALMVRRWRRRGVQVQVSTSNITTAEGA 1836 (2376)
T ss_pred hhcCccceEEEeccccchhHHHHHHHHhcCceEEEEecccc------chhhHHHHHHHHHHhcCeEEEEecccchhhhhH
Confidence 3445678999999999999999999999999 477777642 222322334567778888888866665554
Q ss_pred HHHHHHHHHHcCCccEEEec
Q psy9143 80 DKIVQTALENFGRIDIVINN 99 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~ 99 (100)
.+++++ ..+++++-+++|-
T Consensus 1837 ~~Li~~-s~kl~~vGGiFnL 1855 (2376)
T KOG1202|consen 1837 RGLIEE-SNKLGPVGGIFNL 1855 (2376)
T ss_pred HHHHHH-hhhcccccchhhH
Confidence 444443 2456788777764
No 290
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.28 E-value=1.2e-05 Score=52.65 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=31.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHc-C-CeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAER-G-ASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~-g-~~v~~~~~ 41 (100)
.+.+++++||||+|.||..++++|+++ | .+++++.|
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R 189 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVAR 189 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcC
Confidence 467899999999999999999999864 5 47888866
No 291
>PRK09620 hypothetical protein; Provisional
Probab=98.25 E-value=2.1e-05 Score=48.94 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.0
Q ss_pred CCCCEEEEecCC----------------CchhHHHHHHHHHcCCeEEEEcC
Q psy9143 7 FDGRVAIVTGAG----------------AGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 7 ~~~~~~litG~~----------------~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
|.|+.++||+|. |.+|.++|++|+.+|+.|++++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g 51 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG 51 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 468899999876 77999999999999999998875
No 292
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.22 E-value=4.4e-06 Score=52.26 Aligned_cols=78 Identities=19% Similarity=0.109 Sum_probs=41.0
Q ss_pred EecCCCchhHHHHHHHHHcCC--eEEEEcCCCCCCCCCCChHHHHHHHHH-------------HHhcCCceeeeccCcc-
Q psy9143 14 VTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAE-------------IRSKGGKAVPDYNSVV- 77 (100)
Q Consensus 14 itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~d~~~~~- 77 (100)
+|||+|.+|..+.++|++.+. +|+++.|... .....+.+.+. ..++...+..|++++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~------~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~l 74 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASS------SQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNL 74 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSS------HHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcc------cccchhhhhhhcccccchhhhhhhhhccEEEEecccccccc
Confidence 799999999999999999986 8999988321 11222223111 1233444555777654
Q ss_pred cH-HHHHHHHHHHcCCccEEEecC
Q psy9143 78 DG-DKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 78 ~~-~~~~~~~~~~~~~id~li~~A 100 (100)
.+ ...++++. ..+|++||||
T Consensus 75 GL~~~~~~~L~---~~v~~IiH~A 95 (249)
T PF07993_consen 75 GLSDEDYQELA---EEVDVIIHCA 95 (249)
T ss_dssp G--HHHHHHHH---HH--EEEE--
T ss_pred CCChHHhhccc---cccceeeecc
Confidence 11 22233333 2699999997
No 293
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.17 E-value=4.6e-06 Score=55.22 Aligned_cols=72 Identities=29% Similarity=0.384 Sum_probs=47.3
Q ss_pred EEEecCCCchhHHHHHHHHHcCC--eEEEEcCCCCCCCCCCChHHHHHHHHHH-HhcCCceeeeccCcccHHHHHHHHHH
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
|+|.|+ |.+|..+++.|++++- +|++.+| +..+++++.+++ ..+.....+|+.|.+++.+++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r---------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~----- 65 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADR---------NPEKAERLAEKLLGDRVEAVQVDVNDPESLAELL----- 65 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEES---------SHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHH-----
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEEC---------CHHHHHHHHhhccccceeEEEEecCCHHHHHHHH-----
Confidence 689999 9999999999999874 7899887 677776666543 233445566777665544444
Q ss_pred HcCCccEEEecC
Q psy9143 89 NFGRIDIVINNA 100 (100)
Q Consensus 89 ~~~~id~li~~A 100 (100)
...|++||++
T Consensus 66 --~~~dvVin~~ 75 (386)
T PF03435_consen 66 --RGCDVVINCA 75 (386)
T ss_dssp --TTSSEEEE-S
T ss_pred --hcCCEEEECC
Confidence 2569999985
No 294
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.16 E-value=3.5e-05 Score=44.69 Aligned_cols=48 Identities=27% Similarity=0.465 Sum_probs=36.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcC-CeEEEEcCCCCCCCCCCChHHHHHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (100)
.++++.++++|+ |++|.++++.|.+.| ..|.++++ +....+++.+.+.
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r---------~~~~~~~~~~~~~ 64 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNR---------TLEKAKALAERFG 64 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC---------CHHHHHHHHHHHh
Confidence 356788999998 899999999999986 67888876 4555555554443
No 295
>KOG1430|consensus
Probab=98.16 E-value=9.3e-06 Score=53.43 Aligned_cols=35 Identities=26% Similarity=0.247 Sum_probs=31.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcC--CeEEEEcCC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLG 42 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~ 42 (100)
++.+++||||+|.+|.+++++|++++ ..+.+.|..
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~ 39 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKT 39 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccC
Confidence 56889999999999999999999998 678888763
No 296
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.15 E-value=2.8e-06 Score=53.83 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=29.6
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGG 43 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 43 (100)
++|||++|-||.+++.+|.+.|+.|+++.|++
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~ 32 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRP 32 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCC
Confidence 58999999999999999999999999998843
No 297
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=98.15 E-value=3e-05 Score=49.19 Aligned_cols=48 Identities=19% Similarity=0.346 Sum_probs=38.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (100)
..++.++|+|+ ||+|.+++..|++.|++|.+++| ...+.+++.+.+..
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R---------~~~~~~~la~~~~~ 162 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANR---------TVSKAEELAERFQR 162 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhh
Confidence 35788999999 79999999999999999998876 55555666555543
No 298
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.13 E-value=4e-06 Score=52.09 Aligned_cols=56 Identities=30% Similarity=0.249 Sum_probs=42.1
Q ss_pred HHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHcCCccEEEecC
Q psy9143 25 YALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 25 ~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
++++|+++|++|++++|+. ...+ . ...+.+|+++.+++.++++++. +++|+|||||
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~---------~~~~-~-------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nA 56 (241)
T PRK12428 1 TARLLRFLGARVIGVDRRE---------PGMT-L-------DGFIQADLGDPASIDAAVAALP---GRIDALFNIA 56 (241)
T ss_pred ChHHHHhCCCEEEEEeCCc---------chhh-h-------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECC
Confidence 4788999999999998732 1111 0 1246789999999888887763 6899999997
No 299
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.12 E-value=3.8e-05 Score=48.97 Aligned_cols=48 Identities=21% Similarity=0.387 Sum_probs=39.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcC-CeEEEEcCCCCCCCCCCChHHHHHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (100)
.+.++.++|+|+ ||+|.++++.|...| .+|++++| +.++.+++.+.+.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R---------~~~~a~~l~~~~~ 168 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNR---------TVERAEELAKLFG 168 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeC---------CHHHHHHHHHHhh
Confidence 467889999998 999999999999999 68999877 5566666665554
No 300
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.12 E-value=1e-05 Score=50.63 Aligned_cols=32 Identities=28% Similarity=0.230 Sum_probs=29.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.++|||++|.+|.+++++|.++|++|.+..|+
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~ 33 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRN 33 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeC
Confidence 58999999999999999999999999999873
No 301
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.10 E-value=5.1e-06 Score=53.01 Aligned_cols=76 Identities=18% Similarity=0.076 Sum_probs=51.5
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
+|++||||-+|-=|.=+++.|+++|+.|..+.|+..+....+. .+-..-..-..+......|++|..++.++++++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri--~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI--HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc--eeccccccCCceeEEEeccccchHHHHHHHHhc
Confidence 5899999999999999999999999999999885332211110 111111110112334456999999988888876
No 302
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.07 E-value=1.8e-05 Score=55.84 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=25.7
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEE
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVV 37 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~ 37 (100)
..++|||++|.||.++++.|.++|+.|.
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~ 408 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQGIAYE 408 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence 4699999999999999999999998874
No 303
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.98 E-value=3.3e-05 Score=46.60 Aligned_cols=74 Identities=23% Similarity=0.293 Sum_probs=43.4
Q ss_pred CCCCEEEEecCC----------------CchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCcee
Q psy9143 7 FDGRVAIVTGAG----------------AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70 (100)
Q Consensus 7 ~~~~~~litG~~----------------~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (100)
|.||.++||+|. |-.|.++|+.+..+|+.|+++..+. .+. .+. ..-.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~----------~~~-----~p~--~~~~ 63 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS----------SLP-----PPP--GVKV 63 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT----------S---------T--TEEE
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc----------ccc-----ccc--cceE
Confidence 467888888664 5589999999999999999986521 110 011 1122
Q ss_pred eeccCcccHHHHHHHHHHHcCCccEEEecC
Q psy9143 71 PDYNSVVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 71 ~d~~~~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
.. ..+...+++.+.+.++.-|++|++|
T Consensus 64 i~---v~sa~em~~~~~~~~~~~Di~I~aA 90 (185)
T PF04127_consen 64 IR---VESAEEMLEAVKELLPSADIIIMAA 90 (185)
T ss_dssp EE----SSHHHHHHHHHHHGGGGSEEEE-S
T ss_pred EE---ecchhhhhhhhccccCcceeEEEec
Confidence 23 3444555555555556668888876
No 304
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.98 E-value=0.00017 Score=46.20 Aligned_cols=50 Identities=20% Similarity=0.285 Sum_probs=40.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhc
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (100)
.+.++.++|.|+ ||.|.+++..|...|+ +|.+++| +.++.+.+.+.+...
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR---------~~~ka~~la~~l~~~ 174 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDV---------DPARAAALADELNAR 174 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHHHHHHHHhh
Confidence 356788999998 9999999999999997 7888877 666777777666543
No 305
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.97 E-value=4.9e-05 Score=51.22 Aligned_cols=35 Identities=34% Similarity=0.451 Sum_probs=31.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.++.++|+|+++ +|.++++.|++.|++|++.++
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~ 36 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDG 36 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcC
Confidence 35789999999965 999999999999999999876
No 306
>PRK06849 hypothetical protein; Provisional
Probab=97.93 E-value=0.00017 Score=47.94 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=31.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+.+++||||++.++|+.+++.|.+.|++|++++.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~ 36 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADS 36 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4588999999999999999999999999999976
No 307
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.93 E-value=6.7e-05 Score=56.59 Aligned_cols=33 Identities=24% Similarity=0.083 Sum_probs=29.2
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcC----CeEEEEcC
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERG----ASVVVNDL 41 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g----~~v~~~~~ 41 (100)
.++++|||++|.+|..+++.|++++ .+|+...|
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R 1007 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVR 1007 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEEC
Confidence 4789999999999999999999887 67887776
No 308
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.92 E-value=0.00016 Score=46.33 Aligned_cols=51 Identities=27% Similarity=0.446 Sum_probs=42.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (100)
..+++.++|.|+ ||-+.+++..|++.|+ +|++..| +.++.+++.+.+....
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NR---------t~~ra~~La~~~~~~~ 174 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNR---------TRERAEELADLFGELG 174 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeC---------CHHHHHHHHHHhhhcc
Confidence 345789999999 9999999999999996 6888876 7777888887777654
No 309
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.90 E-value=0.0003 Score=45.16 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=38.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIR 63 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (100)
..++.++|.|+ ||-+++++..|++.|+ ++.+..| +.++.+++.+.+.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR---------~~~ka~~La~~~~ 172 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADL---------DTSRAQALADVIN 172 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC---------CHHHHHHHHHHHh
Confidence 45788999998 9999999999999997 6888876 5666677766554
No 310
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.89 E-value=0.00025 Score=45.45 Aligned_cols=48 Identities=23% Similarity=0.269 Sum_probs=38.7
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHh
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (100)
+.++.++|.|+ ||.+++++..|.+.|+ +|.++.| +.++.+++.+.+..
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nR---------t~~ka~~La~~~~~ 171 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINR---------NPDKLSRLVDLGVQ 171 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeC---------CHHHHHHHHHHhhh
Confidence 46788999988 9999999999999997 6888876 56667777665543
No 311
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.89 E-value=0.00011 Score=48.54 Aligned_cols=32 Identities=34% Similarity=0.340 Sum_probs=27.8
Q ss_pred CEEEEecCCCchhHHHHHHHHHcC-CeEEEEcC
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERG-ASVVVNDL 41 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~ 41 (100)
+++++|||+|.+|..+..+|+.+- ++|++..|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVR 33 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVR 33 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEe
Confidence 468999999999999988888764 59999887
No 312
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.80 E-value=0.00034 Score=45.42 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=30.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|..+++.....|++|+.+.+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~ 184 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAG 184 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC
Confidence 4689999999999999999988888999888765
No 313
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.78 E-value=0.00012 Score=50.63 Aligned_cols=47 Identities=28% Similarity=0.494 Sum_probs=37.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (100)
.+++++++|+|+ ||+|.+++..|++.|++|++++| +.++.+.+.+.+
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR---------~~e~a~~la~~l 422 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANR---------TYERAKELADAV 422 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHh
Confidence 467899999999 79999999999999999998876 455555554443
No 314
>KOG1221|consensus
Probab=97.77 E-value=0.00018 Score=48.85 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=30.7
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcC---CeEEEEcCCC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERG---ASVVVNDLGG 43 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g---~~v~~~~~~~ 43 (100)
+++|+++||||+|.+|.-+.+.+++.- -++++.-|..
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k 49 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAK 49 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecC
Confidence 479999999999999999999998763 2677776643
No 315
>KOG1429|consensus
Probab=97.75 E-value=7.4e-05 Score=47.86 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=32.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
...+.+++||||+|.||++++..|...|+.|+++|.
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn 59 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDN 59 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEec
Confidence 346789999999999999999999999999999875
No 316
>KOG1198|consensus
Probab=97.74 E-value=0.00057 Score=45.07 Aligned_cols=75 Identities=23% Similarity=0.381 Sum_probs=48.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcC-CeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTA 86 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (100)
+++.+|+.||++|+|++.++-....| .+|+.+++ .+.. ++.+ ..+....+|+.+ .++.+++
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s----------~e~~-~l~k---~lGAd~vvdy~~----~~~~e~~ 218 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS----------KEKL-ELVK---KLGADEVVDYKD----ENVVELI 218 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc----------cchH-HHHH---HcCCcEeecCCC----HHHHHHH
Confidence 56799999999999999999888888 45555543 2221 2222 333445567766 3344444
Q ss_pred HHH-cCCccEEEecC
Q psy9143 87 LEN-FGRIDIVINNA 100 (100)
Q Consensus 87 ~~~-~~~id~li~~A 100 (100)
.+. .+++|+++-|+
T Consensus 219 kk~~~~~~DvVlD~v 233 (347)
T KOG1198|consen 219 KKYTGKGVDVVLDCV 233 (347)
T ss_pred HhhcCCCccEEEECC
Confidence 433 56899998763
No 317
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.73 E-value=0.00058 Score=44.77 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=29.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|++|++|...++.....|++|+.+++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~ 191 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 191 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcC
Confidence 4789999999999999999888888999887764
No 318
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.72 E-value=0.00063 Score=44.15 Aligned_cols=32 Identities=22% Similarity=0.123 Sum_probs=28.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+++|.|+++++|...++.....|+ +|+.+++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~ 188 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICG 188 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcC
Confidence 7899999999999999988888898 7888765
No 319
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.72 E-value=0.00066 Score=43.84 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=29.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|...++.....|++|+.+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~ 171 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAG 171 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC
Confidence 4678999999999999999888888999887765
No 320
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.71 E-value=0.0008 Score=43.19 Aligned_cols=34 Identities=35% Similarity=0.498 Sum_probs=30.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|.++++.+...|++++.+.+
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~ 195 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTR 195 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeC
Confidence 4678999999999999999999999999888765
No 321
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.70 E-value=0.00033 Score=49.23 Aligned_cols=80 Identities=19% Similarity=0.221 Sum_probs=54.6
Q ss_pred CCCCCEEEEecCCC-chhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC---CceeeeccCcccHHH
Q psy9143 6 RFDGRVAIVTGAGA-GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPDYNSVVDGDK 81 (100)
Q Consensus 6 ~~~~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~ 81 (100)
...++.++|||++- +|+.+++..|++.|++|+++.++..+ ...+-...++......+ ..+..+..+..+++.
T Consensus 393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~----~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA 468 (866)
T COG4982 393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSE----ERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA 468 (866)
T ss_pred CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccH----HHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence 45689999999985 69999999999999999998653211 11222233333333333 234458888889999
Q ss_pred HHHHHHHH
Q psy9143 82 IVQTALEN 89 (100)
Q Consensus 82 ~~~~~~~~ 89 (100)
+++.+..+
T Consensus 469 lIewIg~e 476 (866)
T COG4982 469 LIEWIGDE 476 (866)
T ss_pred HHHHhccc
Confidence 99888653
No 322
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.70 E-value=0.001 Score=40.66 Aligned_cols=36 Identities=36% Similarity=0.545 Sum_probs=31.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+.+.+++|.|+ ||+|.++++.|+..|. ++.++|..
T Consensus 18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 457788999997 9999999999999997 78888764
No 323
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.67 E-value=0.00046 Score=47.29 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=31.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.++.++|+|+ ||+|.++++.|.+.|+++.+.+|
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R 363 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNR 363 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC
Confidence 457889999996 79999999999999999888876
No 324
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.66 E-value=0.00041 Score=46.74 Aligned_cols=47 Identities=9% Similarity=0.217 Sum_probs=38.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEI 62 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (100)
.+.++.++|.|+ ||+|..+++.|...|. +++++.| +..+.+.+..++
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nR---------t~~ra~~La~~~ 225 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANR---------TIEKAQKITSAF 225 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHHHHHHh
Confidence 467899999999 9999999999999996 6888766 556666665554
No 325
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.66 E-value=0.00097 Score=42.79 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=30.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|.++++.+...|++++++++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~ 199 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAG 199 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 4678999999999999999999999999888865
No 326
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.66 E-value=0.0011 Score=42.21 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=30.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+++++|+|+++++|.++++.+...|.+|+++++
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~ 177 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATAS 177 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 4789999999999999999999999999988865
No 327
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.65 E-value=0.0012 Score=43.15 Aligned_cols=74 Identities=28% Similarity=0.442 Sum_probs=46.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALE 88 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (100)
+.++||+||+||+|...++.....|+.++++.. ..++.+ . +.+.+-....++.+.+ +.+++.+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~---------s~~k~~-~---~~~lGAd~vi~y~~~~----~~~~v~~ 205 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVS---------SSEKLE-L---LKELGADHVINYREED----FVEQVRE 205 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEec---------CHHHHH-H---HHhcCCCEEEcCCccc----HHHHHHH
Confidence 789999999999999999999999976555433 223322 2 2333433444444333 4444444
Q ss_pred HcC--CccEEEec
Q psy9143 89 NFG--RIDIVINN 99 (100)
Q Consensus 89 ~~~--~id~li~~ 99 (100)
..+ .+|+++..
T Consensus 206 ~t~g~gvDvv~D~ 218 (326)
T COG0604 206 LTGGKGVDVVLDT 218 (326)
T ss_pred HcCCCCceEEEEC
Confidence 332 58888764
No 328
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.65 E-value=0.00031 Score=42.89 Aligned_cols=36 Identities=31% Similarity=0.503 Sum_probs=32.5
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+++++++.|+|. |.+|..+++.|.+.|++|+++++
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~ 59 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADI 59 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcC
Confidence 4578999999999 58999999999999999998876
No 329
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.52 E-value=0.0015 Score=42.05 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=32.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+++.+++++|+|. |++|.++++.|...|++|++.+|
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R 182 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGAR 182 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeC
Confidence 4678999999999 88999999999999999999877
No 330
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.52 E-value=0.0021 Score=40.80 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=30.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|..+++.+...|++++++++
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~ 172 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAG 172 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcC
Confidence 4678999999999999999999999999888765
No 331
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.50 E-value=0.0029 Score=39.29 Aligned_cols=33 Identities=39% Similarity=0.535 Sum_probs=29.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++ +|.++++.+...|.+|+++++
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~ 166 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDR 166 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcC
Confidence 467899999988 999999988889999988865
No 332
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.47 E-value=0.003 Score=41.60 Aligned_cols=36 Identities=22% Similarity=0.412 Sum_probs=31.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+.+++++|.|+ ||+|..+++.|+..|. ++.++|+.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 356788999998 8999999999999997 78888874
No 333
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.47 E-value=0.0027 Score=40.92 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=37.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHHh
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (100)
.+.+++++|.|+ ||-+++++..|+..|. +|.+..|+.. ..++.+++.+.+..
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~------~~~ka~~la~~~~~ 173 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE------FFDKALAFAQRVNE 173 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc------HHHHHHHHHHHhhh
Confidence 456789999998 7789999999999997 7888877311 13455666655543
No 334
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=97.44 E-value=0.0034 Score=32.49 Aligned_cols=55 Identities=25% Similarity=0.290 Sum_probs=39.9
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCc
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (100)
++|.|+ |.+|.++|..|.+.|.+|.++.+.+.-. ....++..+.+.+.+.+.+..
T Consensus 2 vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~~-~~~~~~~~~~~~~~l~~~gV~ 56 (80)
T PF00070_consen 2 VVVIGG-GFIGIELAEALAELGKEVTLIERSDRLL-PGFDPDAAKILEEYLRKRGVE 56 (80)
T ss_dssp EEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSSS-TTSSHHHHHHHHHHHHHTTEE
T ss_pred EEEECc-CHHHHHHHHHHHHhCcEEEEEeccchhh-hhcCHHHHHHHHHHHHHCCCE
Confidence 677777 9999999999999999999998865443 333455555566666665433
No 335
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=97.41 E-value=0.0047 Score=40.03 Aligned_cols=91 Identities=19% Similarity=0.305 Sum_probs=52.5
Q ss_pred CCCEEEEecCCCchhHHH--HHHHHHcCCeEEEE--cCCCCCCCCCCChHHHHHHHHHHHhcCCc----eeeeccCcccH
Q psy9143 8 DGRVAIVTGAGAGLGRSY--ALLLAERGASVVVN--DLGGQRDGDGKSSKAADTVVAEIRSKGGK----AVPDYNSVVDG 79 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~--~~~l~~~g~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~~~~~ 79 (100)
..|.+||.|+++|.|++. +..|- -|++.+.+ .++......+....-.....+++...... +.-|..+.+.-
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k 118 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK 118 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence 347899999999988874 33343 45654443 22222222222222223333333333222 23355556666
Q ss_pred HHHHHHHHHHcCCccEEEec
Q psy9143 80 DKIVQTALENFGRIDIVINN 99 (100)
Q Consensus 80 ~~~~~~~~~~~~~id~li~~ 99 (100)
++.++.+...+|.+|.+|++
T Consensus 119 ~kvIe~Ik~~~g~vDlvvYS 138 (398)
T COG3007 119 QKVIEAIKQDFGKVDLVVYS 138 (398)
T ss_pred HHHHHHHHHhhccccEEEEe
Confidence 78888888899999999874
No 336
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.38 E-value=0.003 Score=42.08 Aligned_cols=36 Identities=33% Similarity=0.471 Sum_probs=30.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+.+++++|.|+ ||+|..+++.|+..|. ++.+++..
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 356778888877 9999999999999997 68888764
No 337
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.34 E-value=0.0038 Score=41.14 Aligned_cols=36 Identities=25% Similarity=0.462 Sum_probs=31.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+.+..++|.|+ ||+|..+++.|+..|. ++.++|..
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 356778999999 9999999999999998 89998874
No 338
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.32 E-value=0.0055 Score=38.48 Aligned_cols=36 Identities=22% Similarity=0.430 Sum_probs=30.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+++.+++|.|+ ||+|..+++.|+..|. ++.++|..
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 356778999988 9999999999999996 78887763
No 339
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.32 E-value=0.0013 Score=45.05 Aligned_cols=36 Identities=25% Similarity=0.260 Sum_probs=31.1
Q ss_pred CCCCCEEEEecCC----------------CchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAG----------------AGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~----------------~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.|+.++||+|. |-.|+++|+.+..+|++|.+++-
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~G 304 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG 304 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeC
Confidence 4789999999775 44899999999999999999863
No 340
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.32 E-value=0.0008 Score=39.59 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=31.1
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEc
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND 40 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~ 40 (100)
+++++.++|.|| |.+|...++.|++.|++|.+++
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 468999999998 9999999999999999998884
No 341
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.31 E-value=0.0045 Score=36.48 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=45.9
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHH----------HHhcCCceeeeccCcccH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE----------IRSKGGKAVPDYNSVVDG 79 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~d~~~~~~~ 79 (100)
+++-+.|. |.+|..+++.|+++|++|.+.+| .+++.+++.+. +-.....+..-+.+.+.+
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~---------~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v 71 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDR---------SPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAV 71 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEES---------SHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeecc---------chhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhh
Confidence 34667777 89999999999999999999887 55555554422 111112222334455556
Q ss_pred HHHHHH--HHHHcCCccEEEe
Q psy9143 80 DKIVQT--ALENFGRIDIVIN 98 (100)
Q Consensus 80 ~~~~~~--~~~~~~~id~li~ 98 (100)
+.++.. +.....+=.++|+
T Consensus 72 ~~v~~~~~i~~~l~~g~iiid 92 (163)
T PF03446_consen 72 EAVLFGENILAGLRPGKIIID 92 (163)
T ss_dssp HHHHHCTTHGGGS-TTEEEEE
T ss_pred hhhhhhhHHhhccccceEEEe
Confidence 666655 5444434444544
No 342
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=97.27 E-value=0.0055 Score=40.02 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=27.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|+|+ |++|...++.+...|+ +|+++++
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~ 202 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADV 202 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeC
Confidence 5788999986 8999999988888898 5777765
No 343
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.27 E-value=0.0052 Score=40.04 Aligned_cols=36 Identities=19% Similarity=0.090 Sum_probs=32.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++.++++.|.|. |.||.++++.+...|++|+..++.
T Consensus 133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~ 168 (312)
T PRK15469 133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRS 168 (312)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568899999988 999999999999999999998764
No 344
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.27 E-value=0.0053 Score=39.52 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=29.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|..+++.....|++|+.+.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~ 176 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAG 176 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC
Confidence 4688999999999999999888888999887764
No 345
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.26 E-value=0.007 Score=37.33 Aligned_cols=36 Identities=28% Similarity=0.478 Sum_probs=30.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+.+.+++|.|+ ||+|..+++.|+..|. ++.++|..
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 356778999997 9999999999999997 58888764
No 346
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.26 E-value=0.0073 Score=38.04 Aligned_cols=35 Identities=26% Similarity=0.485 Sum_probs=30.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+..++|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 356788999999 9999999999999996 7888765
No 347
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=97.25 E-value=0.0049 Score=39.66 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=30.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.++++.+...|++++.+.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~ 178 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAG 178 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Confidence 4678999999999999999999999999888765
No 348
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.25 E-value=0.0035 Score=42.29 Aligned_cols=47 Identities=21% Similarity=0.412 Sum_probs=39.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIR 63 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (100)
++++++++.|+ |-+|.-++++|.++|. +|+++.| ...+.+++.+++.
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNR---------T~erA~~La~~~~ 223 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANR---------TLERAEELAKKLG 223 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcC---------CHHHHHHHHHHhC
Confidence 68899999999 8899999999999995 6777765 7777777777765
No 349
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.24 E-value=0.0013 Score=43.11 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=32.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++.++++.|.|. |.||..+++.+...|++|+..++.
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~ 182 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRT 182 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCC
Confidence 578999999999 999999999999999999988774
No 350
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.23 E-value=0.0029 Score=40.70 Aligned_cols=37 Identities=30% Similarity=0.520 Sum_probs=32.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
..+.++.++|.|+++-.|..++..|.++|+.|.++.+
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~ 191 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS 191 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 3578999999999666999999999999999888865
No 351
>KOG2865|consensus
Probab=97.23 E-value=0.0011 Score=42.92 Aligned_cols=70 Identities=23% Similarity=0.151 Sum_probs=46.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhc--CCceeeeccCcccHHHHH
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPDYNSVVDGDKIV 83 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~ 83 (100)
+..|-++-+.||+|.+|.-++.+|++.|..|++=.|..+. ....+ +-..+. ......|+.|++++.+++
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~--------~~r~l-kvmGdLGQvl~~~fd~~DedSIr~vv 128 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEY--------DPRHL-KVMGDLGQVLFMKFDLRDEDSIRAVV 128 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCcc--------chhhe-eecccccceeeeccCCCCHHHHHHHH
Confidence 3456778899999999999999999999999998774321 11110 011111 223345777887777766
Q ss_pred H
Q psy9143 84 Q 84 (100)
Q Consensus 84 ~ 84 (100)
+
T Consensus 129 k 129 (391)
T KOG2865|consen 129 K 129 (391)
T ss_pred H
Confidence 4
No 352
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.22 E-value=0.0014 Score=39.63 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=29.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.+-|.|++|-.|..+.++..++|+.|+.+.|+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRN 33 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeC
Confidence 37789999999999999999999999999884
No 353
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.21 E-value=0.0087 Score=37.21 Aligned_cols=35 Identities=31% Similarity=0.430 Sum_probs=29.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+.+++|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 456788999997 9999999999999997 6777754
No 354
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.21 E-value=0.0042 Score=41.38 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=29.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
..+.++|+|+ |.+|...++.+...|++|+++++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~ 198 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDI 198 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEEC
Confidence 4566888888 89999999999999999999876
No 355
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.20 E-value=0.00089 Score=43.79 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=27.7
Q ss_pred EEEEecCCCchhHHHHHHHHHcC-------CeEEEEcCC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERG-------ASVVVNDLG 42 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g-------~~v~~~~~~ 42 (100)
.++|||++|.+|..++..|+..+ ..+++++++
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~ 42 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIP 42 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcC
Confidence 48999999999999999999854 479999874
No 356
>KOG2733|consensus
Probab=97.19 E-value=0.0023 Score=42.41 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=54.8
Q ss_pred EEEecCCCchhHHHHHHHHH----cCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcC-------CceeeeccCcccHH
Q psy9143 12 AIVTGAGAGLGRSYALLLAE----RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-------GKAVPDYNSVVDGD 80 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~ 80 (100)
++|-||+|.-|.-+++.+.+ .|..+.+..| +++++++.++...... ..+.+|.+|++++.
T Consensus 8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGR---------n~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~ 78 (423)
T KOG2733|consen 8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGR---------NEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLD 78 (423)
T ss_pred EEEEccccccceeeHHHHhhhhcccCceEEEecC---------CHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHH
Confidence 79999999999999999988 6777887765 7888888777665432 24567888888877
Q ss_pred HHHHHHHHHcCCccEEEecC
Q psy9143 81 KIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 81 ~~~~~~~~~~~~id~li~~A 100 (100)
++..+ -.+++||+
T Consensus 79 emak~-------~~vivN~v 91 (423)
T KOG2733|consen 79 EMAKQ-------ARVIVNCV 91 (423)
T ss_pred HHHhh-------hEEEEecc
Confidence 76654 45666664
No 357
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.17 E-value=0.011 Score=33.88 Aligned_cols=30 Identities=33% Similarity=0.587 Sum_probs=26.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
++|.|+ ||+|.++++.|+..|. ++.++|..
T Consensus 2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 688887 9999999999999997 68888653
No 358
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.16 E-value=0.013 Score=35.85 Aligned_cols=36 Identities=25% Similarity=0.519 Sum_probs=31.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+..++++|.|+ ||+|..+++.|++.|. +++++|..
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 356788999999 9999999999999998 69988764
No 359
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=97.16 E-value=0.00097 Score=34.43 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=21.3
Q ss_pred CEEEEecCCCchhHH--HHHHHHHcCCeEEEEcC
Q psy9143 10 RVAIVTGAGAGLGRS--YALLLAERGASVVVNDL 41 (100)
Q Consensus 10 ~~~litG~~~gig~~--~~~~l~~~g~~v~~~~~ 41 (100)
|.+||+|+++|+|++ ++..| ..|++.+-++.
T Consensus 40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f 72 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF 72 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence 889999999999999 44444 56777776654
No 360
>KOG1372|consensus
Probab=97.12 E-value=0.0007 Score=42.91 Aligned_cols=75 Identities=16% Similarity=0.057 Sum_probs=49.1
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHH----hcCCceeeeccCcccHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR----SKGGKAVPDYNSVVDGDKIVQ 84 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~ 84 (100)
.|++||||=+|-=|.-++..|+.+|+.|..+-|+..+. +..+.+-+..... +....--.|++|.+.+.+++.
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsF----NT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~ 103 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSF----NTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS 103 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeecccc----chhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence 46899999999999999999999999999887743332 2333333221111 111112237888888877776
Q ss_pred HHH
Q psy9143 85 TAL 87 (100)
Q Consensus 85 ~~~ 87 (100)
.+.
T Consensus 104 ~ik 106 (376)
T KOG1372|consen 104 TIK 106 (376)
T ss_pred ccC
Confidence 653
No 361
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.12 E-value=0.0093 Score=37.99 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=30.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|.++++.+...|++++++++
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~ 177 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTR 177 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcC
Confidence 4678999999999999999999999999888865
No 362
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.11 E-value=0.003 Score=37.62 Aligned_cols=37 Identities=30% Similarity=0.441 Sum_probs=32.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++.++.++|+|++.-+|..+++.|.++|++|.++.|+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~ 77 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSK 77 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECC
Confidence 5789999999995557999999999999999888773
No 363
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.11 E-value=0.011 Score=38.44 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=32.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++.||++-|.|- |.||+++++.+...|++|+..++.
T Consensus 142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~ 177 (311)
T PRK08410 142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTS 177 (311)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCC
Confidence 578999999998 999999999999999999998764
No 364
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.09 E-value=0.0012 Score=40.36 Aligned_cols=36 Identities=19% Similarity=0.360 Sum_probs=32.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++++++.++|.|+ |.+|...++.|.+.|++|++++.
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~ 41 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISP 41 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcC
Confidence 4678999999999 99999999999999999998864
No 365
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.08 E-value=0.01 Score=33.79 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=27.5
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
+++++|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~ 34 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDD 34 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEES
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCC
Confidence 467899988 9999999999999998 6888765
No 366
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.08 E-value=0.013 Score=38.88 Aligned_cols=36 Identities=31% Similarity=0.375 Sum_probs=30.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+++.+++|.|+ ||+|..+++.|+..|. ++.++|..
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 356788999998 9999999999999997 78887763
No 367
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=97.07 E-value=0.0072 Score=38.45 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=30.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+++++|+|+++++|..+.+.+...|++++++.+
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~ 172 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAG 172 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeC
Confidence 4678999999999999999999999999888765
No 368
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=97.03 E-value=0.006 Score=37.80 Aligned_cols=35 Identities=31% Similarity=0.472 Sum_probs=29.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEE-EcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVV-NDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~-~~~ 41 (100)
+++++++.|.|- |.+|..+++.|.+.|++++. ++.
T Consensus 20 ~l~g~~vaIqGf-GnVG~~~a~~L~~~G~~vV~vsD~ 55 (217)
T cd05211 20 SLEGLTVAVQGL-GNVGWGLAKKLAEEGGKVLAVSDP 55 (217)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEcC
Confidence 568899999996 99999999999999986555 443
No 369
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.03 E-value=0.0054 Score=41.53 Aligned_cols=34 Identities=32% Similarity=0.542 Sum_probs=30.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
+.+++++|.|+ |.+|..+++.|...|+ +|++++|
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r 214 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANR 214 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeC
Confidence 57889999988 9999999999999997 7888876
No 370
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.02 E-value=0.00056 Score=37.37 Aligned_cols=36 Identities=31% Similarity=0.411 Sum_probs=30.4
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++++++.++|+|+ |.+|..-++.|++.|++|.+++.
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~ 38 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISP 38 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEES
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECC
Confidence 4678999999999 99999999999999999999865
No 371
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.01 E-value=0.0086 Score=38.75 Aligned_cols=35 Identities=29% Similarity=0.327 Sum_probs=31.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++++|.|. |++|..+++.|...|++|++++|
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r 183 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGAR 183 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC
Confidence 457899999998 78999999999999999999987
No 372
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.99 E-value=0.00042 Score=41.45 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=32.1
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.++.++++.|.|. |.||+++++.+...|++|+..++.
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~ 68 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRS 68 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESS
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEeccc
Confidence 4578999999988 999999999999999999999873
No 373
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.99 E-value=0.0025 Score=40.39 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=27.7
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.++|+||++- |..+++.|.+.|++|+.+.++
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t 32 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTT 32 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEcc
Confidence 5899999887 999999999999999888764
No 374
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.99 E-value=0.0091 Score=39.17 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=32.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.+|++-|.|. |.||+.+++.+...|++|+..++
T Consensus 139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~ 173 (324)
T COG0111 139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDP 173 (324)
T ss_pred cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECC
Confidence 567999999998 99999999999999999999987
No 375
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.97 E-value=0.008 Score=40.66 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=30.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcC-CeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~ 41 (100)
.+.+++++|.|+ |.+|..+++.|...| .+|++++|
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~r 212 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANR 212 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeC
Confidence 357889999998 999999999999999 57888876
No 376
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.96 E-value=0.021 Score=37.73 Aligned_cols=33 Identities=33% Similarity=0.451 Sum_probs=29.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++++.|+|.. |+|...++.....|++|+++++
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~ 198 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITR 198 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeC
Confidence 47899999996 9999888888889999999987
No 377
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.95 E-value=0.014 Score=35.56 Aligned_cols=35 Identities=26% Similarity=0.349 Sum_probs=29.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
+.+.+++|.|+ ||+|.++++.|+..|. ++.++|..
T Consensus 17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45677899988 6799999999999997 58888753
No 378
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.95 E-value=0.015 Score=35.96 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=32.7
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
..++.++.++|+|| |..|..=++.|++.|++|++++-
T Consensus 7 ~~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~ 43 (210)
T COG1648 7 FLDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSP 43 (210)
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcC
Confidence 34678999999999 89999999999999999998753
No 379
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.92 E-value=0.0064 Score=35.18 Aligned_cols=37 Identities=35% Similarity=0.537 Sum_probs=34.2
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-.|..++..|.++|+.|.++++
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~ 60 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDW 60 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCC
Confidence 3578999999999999999999999999999999875
No 380
>KOG1203|consensus
Probab=96.91 E-value=0.0077 Score=40.62 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=31.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+...++++||+|.+|+-+++.|.++|+.|.+..|
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VR 111 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVR 111 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeecc
Confidence 4578999999999999999999999999888876
No 381
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.90 E-value=0.022 Score=35.83 Aligned_cols=32 Identities=34% Similarity=0.369 Sum_probs=28.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+.++.++=.||.+| -+++.+++.|+.|..+|-
T Consensus 58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~ 89 (243)
T COG2227 58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDA 89 (243)
T ss_pred CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecC
Confidence 67889999999999 478899999999999976
No 382
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.90 E-value=0.0046 Score=40.09 Aligned_cols=37 Identities=30% Similarity=0.363 Sum_probs=34.1
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.+.+.|.++-+|..++..|.++|+.|.++.+
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~ 191 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHS 191 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECC
Confidence 3578999999999999999999999999999999866
No 383
>PLN00203 glutamyl-tRNA reductase
Probab=96.89 E-value=0.013 Score=40.86 Aligned_cols=46 Identities=22% Similarity=0.333 Sum_probs=37.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHHH
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEI 62 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (100)
+.++.++|.|+ |.+|..+++.|...|+ +|+++.| +....+.+...+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nR---------s~era~~La~~~ 310 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNR---------SEERVAALREEF 310 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeC---------CHHHHHHHHHHh
Confidence 67899999999 9999999999999997 6888876 555555555443
No 384
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.89 E-value=0.016 Score=35.38 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=29.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
+.+.+++|.|+ +|+|.++++.|+..|. ++.++|..
T Consensus 19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46778899987 7799999999999997 68888653
No 385
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.88 E-value=0.0066 Score=39.14 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.7
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
..+.|+.++|+|.+.-+|..++..|..+|+.|+++.+
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s 190 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS 190 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence 3578999999999888999999999999999998876
No 386
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.87 E-value=0.027 Score=37.23 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=27.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.....|+ +|+.+++
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~ 218 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDI 218 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4678999986 8999999988888898 6888765
No 387
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.87 E-value=0.022 Score=38.05 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=30.7
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.+.+.+++|.|+ ||+|..+++.|+..|. ++.++|..
T Consensus 38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 356778999998 9999999999999996 78888763
No 388
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.87 E-value=0.0065 Score=37.48 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=28.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.|+|++|.+|.++++.|++.|++|.+.+|
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r 32 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSR 32 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 4789998899999999999999999998876
No 389
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.86 E-value=0.01 Score=39.00 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=32.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.+.++++.|.|. |.||.++++.|...|++|++.++.
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~ 178 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAY 178 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC
Confidence 467889999988 889999999999999999999874
No 390
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=96.86 E-value=0.028 Score=37.11 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=27.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.+...|+ +|+.+++
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~ 219 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDI 219 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence 4688999985 8999999998888999 6888765
No 391
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.84 E-value=0.023 Score=36.37 Aligned_cols=34 Identities=38% Similarity=0.451 Sum_probs=30.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|..+++.+...|++++.+++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~ 175 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAG 175 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 4678999999999999999999999999888765
No 392
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.83 E-value=0.0041 Score=36.78 Aligned_cols=37 Identities=27% Similarity=0.576 Sum_probs=30.1
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~ 68 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHS 68 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-T
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccC
Confidence 3578999999999999999999999999999999865
No 393
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.82 E-value=0.0043 Score=34.18 Aligned_cols=29 Identities=38% Similarity=0.502 Sum_probs=24.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++|.|. +.+|..+++.|.+.+.++++++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~ 29 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDR 29 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEES
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEEC
Confidence 467777 78999999999997778999876
No 394
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.82 E-value=0.01 Score=38.57 Aligned_cols=34 Identities=26% Similarity=0.494 Sum_probs=29.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
+.+++++|.|+ |.+|..+++.|...|. +|++++|
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r 210 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANR 210 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeC
Confidence 56889999998 9999999999998774 6888876
No 395
>PLN02740 Alcohol dehydrogenase-like
Probab=96.82 E-value=0.03 Score=37.21 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=28.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.+...|+ +|+++++
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~ 231 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDI 231 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcC
Confidence 4678999986 9999999998888898 5888765
No 396
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.82 E-value=0.022 Score=36.68 Aligned_cols=34 Identities=26% Similarity=0.309 Sum_probs=29.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.++++.....|++++.+.+
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~ 172 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCS 172 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeC
Confidence 4678999999999999999988888999888765
No 397
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.81 E-value=0.029 Score=35.77 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=30.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.++++.....|++|+.+.+
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~ 175 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTR 175 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeC
Confidence 4679999999999999999999999999888765
No 398
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.79 E-value=0.01 Score=39.09 Aligned_cols=73 Identities=21% Similarity=0.179 Sum_probs=50.8
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHH
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALEN 89 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (100)
..++|-|++|.-|.-++++|++.|.+..+..| +..++..+...+......+.+ .+++. +++ .
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgR---------s~~kl~~l~~~LG~~~~~~p~--~~p~~----~~~---~ 68 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGR---------SSAKLDALRASLGPEAAVFPL--GVPAA----LEA---M 68 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccC---------CHHHHHHHHHhcCccccccCC--CCHHH----HHH---H
Confidence 45899999999999999999999988777655 788888777666443322222 22322 222 2
Q ss_pred cCCccEEEecC
Q psy9143 90 FGRIDIVINNA 100 (100)
Q Consensus 90 ~~~id~li~~A 100 (100)
.....+|+||+
T Consensus 69 ~~~~~VVlncv 79 (382)
T COG3268 69 ASRTQVVLNCV 79 (382)
T ss_pred HhcceEEEecc
Confidence 24678888885
No 399
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.78 E-value=0.026 Score=36.64 Aligned_cols=33 Identities=27% Similarity=0.321 Sum_probs=28.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCe-EEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~ 41 (100)
.+.+++|+|+ +++|...++.+...|++ |+++++
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~ 196 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDP 196 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence 4778999986 89999999988889998 888765
No 400
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.77 E-value=0.0063 Score=37.86 Aligned_cols=30 Identities=43% Similarity=0.536 Sum_probs=27.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++|.|+ |-+|..+|+.|.+.|++|+++++
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~ 31 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDR 31 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEc
Confidence 4677777 99999999999999999999987
No 401
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.73 E-value=0.032 Score=34.95 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=30.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+.+++|.|+ ||+|..+++.|++.|. +++++|.
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~ 43 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDF 43 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence 356778999998 9999999999999997 7888875
No 402
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=96.73 E-value=0.0055 Score=36.05 Aligned_cols=42 Identities=29% Similarity=0.424 Sum_probs=33.9
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHh
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (100)
++++|+++-+|++++..|.++|.+|++. ..+..+.++.+++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~-----------~~~~y~~lk~~~~~ 42 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML-----------SKERYESLKSEAPE 42 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe-----------cHHHHHHHHHHcCH
Confidence 4789999999999999999999999987 34555666655543
No 403
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.72 E-value=0.0096 Score=33.90 Aligned_cols=32 Identities=28% Similarity=0.186 Sum_probs=26.6
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.-.+-|.|+ |-+|.++++.|.+.|+.|..+..
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~s 41 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYS 41 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESS
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEe
Confidence 346889998 99999999999999999887753
No 404
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.71 E-value=0.049 Score=35.48 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=32.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++.++++-|.|- |.||.++++.+...|++|+..++.
T Consensus 119 ~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~ 154 (303)
T PRK06436 119 LLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRS 154 (303)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCC
Confidence 578999999998 999999999888889999999874
No 405
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=96.70 E-value=0.015 Score=36.92 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=29.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEE
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVN 39 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~ 39 (100)
.+++++++.|.|- |.+|+.+++.|.+.|++|+.+
T Consensus 34 ~~l~g~~vaIqGf-GnVG~~~a~~L~e~GakvvaV 67 (254)
T cd05313 34 ETLKGKRVAISGS-GNVAQYAAEKLLELGAKVVTL 67 (254)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE
Confidence 3567899999988 999999999999999998844
No 406
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=96.70 E-value=0.029 Score=36.02 Aligned_cols=34 Identities=21% Similarity=0.465 Sum_probs=29.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|..+++.+...|++++++.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~ 173 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS 173 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 4678999999999999999999999998777654
No 407
>PRK08328 hypothetical protein; Provisional
Probab=96.70 E-value=0.011 Score=36.88 Aligned_cols=34 Identities=29% Similarity=0.450 Sum_probs=29.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
+.+.+++|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~ 59 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDE 59 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46778999998 9999999999999997 6888865
No 408
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=96.69 E-value=0.029 Score=36.34 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=30.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.++++.....|++++++.+
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~ 179 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVR 179 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEc
Confidence 4688999999999999999999999999887765
No 409
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.69 E-value=0.042 Score=38.28 Aligned_cols=33 Identities=24% Similarity=0.088 Sum_probs=29.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+ |.+|...+..+...|+.|+++++
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~ 195 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDT 195 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 3568999997 99999999999999999988876
No 410
>PRK07411 hypothetical protein; Validated
Probab=96.69 E-value=0.039 Score=37.15 Aligned_cols=35 Identities=29% Similarity=0.526 Sum_probs=30.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
++.+.+++|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~ 70 (390)
T PRK07411 35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDF 70 (390)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence 356778999998 9999999999999997 6888765
No 411
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.67 E-value=0.013 Score=37.76 Aligned_cols=37 Identities=30% Similarity=0.566 Sum_probs=33.5
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++|+.|.++..
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs 189 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI 189 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC
Confidence 3578999999999999999999999999999998754
No 412
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.67 E-value=0.02 Score=39.27 Aligned_cols=35 Identities=34% Similarity=0.307 Sum_probs=31.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++++.++|.|+ |++|.++++.|.++|++|.++++
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~ 47 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDD 47 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 456788999998 88999999999999999999875
No 413
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.66 E-value=0.042 Score=36.96 Aligned_cols=34 Identities=29% Similarity=0.510 Sum_probs=29.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
+.+.+++|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~ 74 (392)
T PRK07878 40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEF 74 (392)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence 46778999998 9999999999999997 6888765
No 414
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.66 E-value=0.051 Score=37.87 Aligned_cols=33 Identities=24% Similarity=0.096 Sum_probs=29.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+ |.+|+..+......|+.|+++++
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~ 196 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDT 196 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeC
Confidence 4678999999 99999999999999999999886
No 415
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.65 E-value=0.031 Score=35.87 Aligned_cols=34 Identities=32% Similarity=0.423 Sum_probs=30.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.++++.....|++++++.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~ 172 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVR 172 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec
Confidence 4678999999999999999999999999888754
No 416
>PRK04148 hypothetical protein; Provisional
Probab=96.65 E-value=0.019 Score=33.03 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=27.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+++.++..|.. .|.+++..|.+.|+.|+++|.
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi 47 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDI 47 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEEC
Confidence 35679999985 788889999999999999987
No 417
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.63 E-value=0.016 Score=34.82 Aligned_cols=30 Identities=37% Similarity=0.478 Sum_probs=25.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++-|.|+ |-+|..++..++..|++|.+.+.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~ 30 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDR 30 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-S
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEEC
Confidence 3668888 99999999999999999999987
No 418
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=96.63 E-value=0.025 Score=37.90 Aligned_cols=36 Identities=19% Similarity=0.322 Sum_probs=32.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+++.++++-|.|. |.||..+++.+...|++|+..++
T Consensus 112 ~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp 147 (378)
T PRK15438 112 FSLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDP 147 (378)
T ss_pred CCcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECC
Confidence 4578999999998 99999999999999999999875
No 419
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=96.62 E-value=0.046 Score=36.07 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=27.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.....|+ +|+++++
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~ 220 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDL 220 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4678999985 8999999988888898 7888865
No 420
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.61 E-value=0.005 Score=37.79 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=32.7
Q ss_pred CCCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 4 ~~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+.++.++.++|.|+ |.+|..-++.|++.|++|++++.
T Consensus 4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp 40 (205)
T TIGR01470 4 FANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAE 40 (205)
T ss_pred EEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcC
Confidence 34678999999998 89999999999999999998864
No 421
>KOG0069|consensus
Probab=96.60 E-value=0.015 Score=38.28 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=30.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
..+.+|++.|.|. |+||+.++++|...|..+....|
T Consensus 158 ~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r 193 (336)
T KOG0069|consen 158 YDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSR 193 (336)
T ss_pred ccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecc
Confidence 3467899999998 99999999999999966766665
No 422
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=96.60 E-value=0.053 Score=35.03 Aligned_cols=33 Identities=21% Similarity=0.403 Sum_probs=28.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHc-CCeEEEEcC
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAER-GASVVVNDL 41 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~ 41 (100)
+.+++|.|+++++|..+++..... |++|+.+.+
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~ 182 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATAS 182 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcC
Confidence 679999999999999998777766 999888765
No 423
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.58 E-value=0.042 Score=32.83 Aligned_cols=30 Identities=37% Similarity=0.610 Sum_probs=26.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
++|.|+ ||+|..+++.|+..|. ++.++|..
T Consensus 2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D 32 (174)
T cd01487 2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFD 32 (174)
T ss_pred EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 678887 9999999999999998 58888764
No 424
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.57 E-value=0.01 Score=36.98 Aligned_cols=35 Identities=34% Similarity=0.470 Sum_probs=29.8
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEE-EEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVV-VNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~-~~~~ 41 (100)
+++++++.|.|. |.+|..+++.|.+.|++|+ +.++
T Consensus 28 ~l~~~~v~I~G~-G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 28 GLAGARVAIQGF-GNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECC
Confidence 467889999985 9999999999999999988 4443
No 425
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.57 E-value=0.013 Score=34.36 Aligned_cols=39 Identities=26% Similarity=0.364 Sum_probs=31.7
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHH
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 60 (100)
+.|.|+ |..|.++|..|..+|++|.+..| +++..+.+.+
T Consensus 2 I~ViGa-G~~G~AlA~~la~~g~~V~l~~~---------~~~~~~~i~~ 40 (157)
T PF01210_consen 2 IAVIGA-GNWGTALAALLADNGHEVTLWGR---------DEEQIEEINE 40 (157)
T ss_dssp EEEESS-SHHHHHHHHHHHHCTEEEEEETS---------CHHHHHHHHH
T ss_pred EEEECc-CHHHHHHHHHHHHcCCEEEEEec---------cHHHHHHHHH
Confidence 667787 99999999999999999999976 5555555543
No 426
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=96.56 E-value=0.049 Score=35.24 Aligned_cols=36 Identities=28% Similarity=0.417 Sum_probs=30.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 42 (100)
.|.+.+++|.|+ +|+|.++++.|+..|. ++.++|..
T Consensus 16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d 52 (286)
T cd01491 16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTK 52 (286)
T ss_pred HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 346678999988 9999999999999997 68887753
No 427
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=96.56 E-value=0.06 Score=34.93 Aligned_cols=34 Identities=29% Similarity=0.484 Sum_probs=30.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.++++.+...|++|+.+.+
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~ 198 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDV 198 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 4678999999999999999999999999988865
No 428
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.55 E-value=0.052 Score=30.60 Aligned_cols=79 Identities=22% Similarity=0.262 Sum_probs=46.8
Q ss_pred EEEEecCCCchhHHHHHHHHH-cCCeEEEE-cCCCCCCCCCCCh--------------HHHHHHHHHHHhcCCceeeecc
Q psy9143 11 VAIVTGAGAGLGRSYALLLAE-RGASVVVN-DLGGQRDGDGKSS--------------KAADTVVAEIRSKGGKAVPDYN 74 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~-~g~~v~~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~d~~ 74 (100)
.+.|.|++|-+|+.+++.+.+ .+..++.. +++. +...+... ..++.+.. . .-+..|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~-~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~----~-~DVvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP-SAKVGKDVGELAGIGPLGVPVTDDLEELLE----E-ADVVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT-STTTTSBCHHHCTSST-SSBEBS-HHHHTT----H--SEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC-cccccchhhhhhCcCCcccccchhHHHhcc----c-CCEEEEcC
Confidence 478999999999999999999 57775554 4432 11111111 22222222 1 34677999
Q ss_pred CcccHHHHHHHHHHHcCCccEEE
Q psy9143 75 SVVDGDKIVQTALENFGRIDIVI 97 (100)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~id~li 97 (100)
.++.....++...++ ++.+++
T Consensus 76 ~p~~~~~~~~~~~~~--g~~~Vi 96 (124)
T PF01113_consen 76 NPDAVYDNLEYALKH--GVPLVI 96 (124)
T ss_dssp -HHHHHHHHHHHHHH--T-EEEE
T ss_pred ChHHhHHHHHHHHhC--CCCEEE
Confidence 888777777766655 444444
No 429
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.54 E-value=0.044 Score=34.76 Aligned_cols=34 Identities=29% Similarity=0.436 Sum_probs=30.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|..++..+...|+.|+.+++
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~ 172 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAAS 172 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeC
Confidence 4678999999999999999999999999888765
No 430
>PRK08223 hypothetical protein; Validated
Probab=96.54 E-value=0.012 Score=38.02 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=30.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+..++|.|+ ||+|..++..|+..|. ++.++|.
T Consensus 24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~ 59 (287)
T PRK08223 24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADF 59 (287)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeC
Confidence 356788999998 9999999999999997 6888765
No 431
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=96.51 E-value=0.051 Score=36.54 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=27.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC---eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA---SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~ 41 (100)
.+.+++|.|++|++|...++.+...|+ +|+++++
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~ 211 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDV 211 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcC
Confidence 357899999999999998887766553 6888765
No 432
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.51 E-value=0.013 Score=37.76 Aligned_cols=36 Identities=31% Similarity=0.488 Sum_probs=33.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.|++++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs 190 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS 190 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC
Confidence 578999999999999999999999999999998765
No 433
>PTZ00325 malate dehydrogenase; Provisional
Probab=96.51 E-value=0.027 Score=36.97 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=29.8
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcC--CeEEEEcC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDL 41 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~ 41 (100)
++.+.+.|+|++|.+|..++..++.++ ..++++|.
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di 42 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDI 42 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEec
Confidence 456789999999999999999998766 46898886
No 434
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.49 E-value=0.015 Score=37.60 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=33.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||+++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs 187 (287)
T PRK14173 151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHS 187 (287)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCC
Confidence 3578999999999999999999999999999998865
No 435
>PRK07574 formate dehydrogenase; Provisional
Probab=96.48 E-value=0.031 Score=37.61 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=33.0
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.++.++++.|.|. |.||+.+++.|...|++|+..++.
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~ 224 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRH 224 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCC
Confidence 3578999999998 889999999999999999998874
No 436
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.48 E-value=0.014 Score=35.94 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=25.4
Q ss_pred EEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 13 IVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 13 litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
+..+|+|.||.+++++|++.|+.|++..|+
T Consensus 4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r 33 (211)
T COG2085 4 IAIIGTGNIGSALALRLAKAGHEVIIGSSR 33 (211)
T ss_pred EEEeccChHHHHHHHHHHhCCCeEEEecCC
Confidence 445566999999999999999999998663
No 437
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.47 E-value=0.015 Score=37.25 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=34.2
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcCCCCCCCCCCChHHHHHHHHH
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAE 61 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (100)
++.++|.|+ ||-+++++..|.+.|+ +|.++.| +.++.+.+.+.
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR---------~~~~a~~la~~ 165 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVAR---------NEKTGKALAEL 165 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC---------CHHHHHHHHHH
Confidence 467899997 9999999999999997 5888877 55555555543
No 438
>PLN02928 oxidoreductase family protein
Probab=96.47 E-value=0.018 Score=38.15 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=32.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++.++++.|.|. |.||+++++.+...|++|+..++.
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS 191 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 578999999998 999999999999999999998764
No 439
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=96.47 E-value=0.064 Score=34.67 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=25.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
..++++|+++++|...++.....|++++.+++
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~ 176 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVR 176 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeC
Confidence 44444589999999999877778999888765
No 440
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.47 E-value=0.015 Score=37.46 Aligned_cols=37 Identities=27% Similarity=0.413 Sum_probs=33.6
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs 189 (281)
T PRK14183 153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHI 189 (281)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC
Confidence 3578999999999999999999999999999998754
No 441
>PRK06487 glycerate dehydrogenase; Provisional
Probab=96.47 E-value=0.033 Score=36.44 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=32.6
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++.+|++.|.|. |.||+++++.+...|++|+..++.
T Consensus 145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 578999999998 999999999999999999988764
No 442
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.45 E-value=0.016 Score=37.40 Aligned_cols=37 Identities=32% Similarity=0.508 Sum_probs=34.1
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs 191 (284)
T PRK14177 155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHS 191 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC
Confidence 3578999999999999999999999999999999875
No 443
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=96.45 E-value=0.035 Score=35.14 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=30.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.++++.....|++++.+++
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~ 169 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVS 169 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcC
Confidence 4688999999999999999998899999888765
No 444
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.45 E-value=0.014 Score=37.88 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=32.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEc
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND 40 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~ 40 (100)
++.||.+++.|.++-+|..++..|++.|+.|.++.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~ 189 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH 189 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence 57899999999999999999999999999999985
No 445
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.44 E-value=0.041 Score=35.72 Aligned_cols=31 Identities=29% Similarity=0.571 Sum_probs=26.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcC--CeEEEEcCC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLG 42 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~ 42 (100)
.+.|.|+ |++|..++..|+.+| ..+++++++
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~ 34 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDIN 34 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 5788897 999999999999999 479999873
No 446
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.44 E-value=0.02 Score=36.91 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.7
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||+++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs 190 (284)
T PRK14190 154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHS 190 (284)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeC
Confidence 3578999999999999999999999999999998864
No 447
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=96.43 E-value=0.12 Score=33.78 Aligned_cols=33 Identities=33% Similarity=0.496 Sum_probs=27.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.+...|+ +|+++++
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~ 205 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEP 205 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence 4678999985 8999999999999999 7877754
No 448
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.42 E-value=0.061 Score=34.95 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=29.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|+|+++++|.++++.....|++|+.+.+
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~ 195 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCS 195 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC
Confidence 3789999999999999999988889999887653
No 449
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.42 E-value=0.017 Score=37.89 Aligned_cols=36 Identities=11% Similarity=0.094 Sum_probs=31.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHH-HcCCeEEEEcCC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLA-ERGASVVVNDLG 42 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~-~~g~~v~~~~~~ 42 (100)
++.++++-|.|. |.||.++++.+. ..|.+|+..++.
T Consensus 142 ~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~ 178 (323)
T PRK15409 142 DVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARR 178 (323)
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCC
Confidence 578999999998 999999999997 789999887653
No 450
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.41 E-value=0.017 Score=37.24 Aligned_cols=37 Identities=27% Similarity=0.456 Sum_probs=33.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs 189 (284)
T PRK14170 153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHS 189 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC
Confidence 3578999999999999999999999999999998865
No 451
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=96.41 E-value=0.028 Score=36.50 Aligned_cols=73 Identities=23% Similarity=0.138 Sum_probs=48.3
Q ss_pred CCEEEEecC-CCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 9 GRVAIVTGA-GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 9 ~~~~litG~-~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
...++|.|. ...+++.++.-|-++|+-|+++.. +.+.......+-.....-+..|..++.++...+.++.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~---------~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~ 73 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVS---------SAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFA 73 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeC---------CHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHH
Confidence 356888886 578999999999999999999875 3333333332221222233456677777777777766
Q ss_pred HHc
Q psy9143 88 ENF 90 (100)
Q Consensus 88 ~~~ 90 (100)
+..
T Consensus 74 ~~L 76 (299)
T PF08643_consen 74 SLL 76 (299)
T ss_pred HHh
Confidence 544
No 452
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.41 E-value=0.025 Score=36.36 Aligned_cols=31 Identities=32% Similarity=0.424 Sum_probs=28.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 10 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
+.+.|.|+ |.+|..++..|+.+|++|++.++
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~ 35 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDV 35 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeC
Confidence 56788887 99999999999999999999987
No 453
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.41 E-value=0.043 Score=34.24 Aligned_cols=34 Identities=9% Similarity=0.061 Sum_probs=30.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEc
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND 40 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~ 40 (100)
+++++.|+|.|| |.++..=++.|++.|++|.+++
T Consensus 22 ~~~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVa 55 (223)
T PRK05562 22 LSNKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILS 55 (223)
T ss_pred ECCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 457889999999 8899999999999999999885
No 454
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.40 E-value=0.064 Score=30.65 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=33.3
Q ss_pred EEEecCCCchhHHHHHHHHHcC--CeEEEEcCCCCCCCCCCChHHHHHHHHHHHh
Q psy9143 12 AIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (100)
+.|.|+||+||.....-+.+.. ++|+.+.- +.+.+.+.+...++..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa-------~~n~~~L~~q~~~f~p 48 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSA-------GSNIEKLAEQAREFKP 48 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEE-------SSTHHHHHHHHHHHT-
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEc-------CCCHHHHHHHHHHhCC
Confidence 5789999999999999888876 67777643 3456666666655543
No 455
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=96.40 E-value=0.037 Score=35.41 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=30.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.++++.+...|++++++.+
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~ 171 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVR 171 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec
Confidence 4678999999999999999999999999888765
No 456
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.40 E-value=0.018 Score=37.17 Aligned_cols=37 Identities=32% Similarity=0.364 Sum_probs=33.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.|+.++|+|.+.-+|..++..|..+|+.|.++.+
T Consensus 155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs 191 (285)
T PRK10792 155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHR 191 (285)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEEC
Confidence 3578999999999999999999999999999999876
No 457
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=96.38 E-value=0.086 Score=34.51 Aligned_cols=77 Identities=25% Similarity=0.276 Sum_probs=47.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHH
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTAL 87 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (100)
.|.+++|++|+|..|.-..+--.-+|++|+.+.- ..++..-+.++ .+.-...|+-.. ++. +.+.
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaG---------g~eK~~~l~~~---lGfD~~idyk~~-d~~---~~L~ 213 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAG---------GAEKCDFLTEE---LGFDAGIDYKAE-DFA---QALK 213 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecC---------CHHHHHHHHHh---cCCceeeecCcc-cHH---HHHH
Confidence 4789999999999998877766667999998864 33433333222 222233455444 333 3334
Q ss_pred HHcC-CccEEEecC
Q psy9143 88 ENFG-RIDIVINNA 100 (100)
Q Consensus 88 ~~~~-~id~li~~A 100 (100)
+..+ .||+.+-|.
T Consensus 214 ~a~P~GIDvyfeNV 227 (340)
T COG2130 214 EACPKGIDVYFENV 227 (340)
T ss_pred HHCCCCeEEEEEcC
Confidence 4443 588887763
No 458
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.38 E-value=0.031 Score=41.93 Aligned_cols=75 Identities=27% Similarity=0.254 Sum_probs=48.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcC-Ce-------------EEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeec
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERG-AS-------------VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDY 73 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g-~~-------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (100)
+.+.++|.|+ |.+|...++.|++.. +. |.+.++ .....+.+.+.+. ....+.+|+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~---------~~~~a~~la~~~~-~~~~v~lDv 636 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASL---------YLKDAKETVEGIE-NAEAVQLDV 636 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECC---------CHHHHHHHHHhcC-CCceEEeec
Confidence 3568999998 999999999998763 33 666665 4455555544331 223466777
Q ss_pred cCcccHHHHHHHHHHHcCCccEEEecC
Q psy9143 74 NSVVDGDKIVQTALENFGRIDIVINNA 100 (100)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~id~li~~A 100 (100)
.|.+++.+++ .++|+||++.
T Consensus 637 ~D~e~L~~~v-------~~~DaVIsal 656 (1042)
T PLN02819 637 SDSESLLKYV-------SQVDVVISLL 656 (1042)
T ss_pred CCHHHHHHhh-------cCCCEEEECC
Confidence 7665443332 2588888763
No 459
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.38 E-value=0.018 Score=37.08 Aligned_cols=36 Identities=28% Similarity=0.394 Sum_probs=33.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs 190 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHR 190 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcC
Confidence 578999999999999999999999999999999865
No 460
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=96.38 E-value=0.066 Score=34.78 Aligned_cols=33 Identities=27% Similarity=0.289 Sum_probs=28.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.| ++++|..+++.+...|++++.+++
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~ 195 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISR 195 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeC
Confidence 467899999 799999999988889999888865
No 461
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.38 E-value=0.017 Score=37.44 Aligned_cols=36 Identities=28% Similarity=0.462 Sum_probs=33.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs 190 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHS 190 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC
Confidence 578999999999999999999999999999998865
No 462
>PLN02477 glutamate dehydrogenase
Probab=96.37 E-value=0.015 Score=39.36 Aligned_cols=35 Identities=29% Similarity=0.562 Sum_probs=29.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEE-EEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVV-VNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~-~~~~ 41 (100)
+++++++.|.|. |.+|+.+++.|.+.|++|+ +++.
T Consensus 203 ~l~g~~VaIqGf-GnVG~~~A~~L~e~GakVVaVsD~ 238 (410)
T PLN02477 203 SIAGQTFVIQGF-GNVGSWAAQLIHEKGGKIVAVSDI 238 (410)
T ss_pred CccCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECC
Confidence 567899999975 9999999999999999988 4443
No 463
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.37 E-value=0.14 Score=33.63 Aligned_cols=33 Identities=36% Similarity=0.531 Sum_probs=29.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.+...|++|+++++
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~ 198 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDI 198 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcC
Confidence 4788999999 99999999988889999888765
No 464
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=96.37 E-value=0.1 Score=34.79 Aligned_cols=34 Identities=29% Similarity=0.323 Sum_probs=29.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|.+++......|++++++++
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~ 226 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVS 226 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeC
Confidence 4678999999999999999888888999877754
No 465
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.35 E-value=0.019 Score=36.97 Aligned_cols=37 Identities=24% Similarity=0.434 Sum_probs=33.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs 190 (278)
T PRK14172 154 IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHS 190 (278)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC
Confidence 3578999999999999999999999999999999865
No 466
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=96.35 E-value=0.12 Score=34.61 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=29.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|..+++.+...|++++++.+
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~ 222 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVS 222 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcC
Confidence 4678999999999999999888888999877654
No 467
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=96.34 E-value=0.065 Score=29.89 Aligned_cols=64 Identities=28% Similarity=0.377 Sum_probs=39.9
Q ss_pred chhHHHHHHHHHcCCeEEEEcCCCCCCCCCCChHHHHHHHHHHHhcCCceeeeccCcccHHHHHHHHHHHcC--CccEEE
Q psy9143 20 GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPDYNSVVDGDKIVQTALENFG--RIDIVI 97 (100)
Q Consensus 20 gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~id~li 97 (100)
|+|...++.+...|++|+++++ ++.+.+.+ .+.+.....|..+.+ +.+++.+..+ ++|++|
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~---------~~~k~~~~----~~~Ga~~~~~~~~~~----~~~~i~~~~~~~~~d~vi 63 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDR---------SEEKLELA----KELGADHVIDYSDDD----FVEQIRELTGGRGVDVVI 63 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEES---------SHHHHHHH----HHTTESEEEETTTSS----HHHHHHHHTTTSSEEEEE
T ss_pred ChHHHHHHHHHHcCCEEEEEEC---------CHHHHHHH----Hhhcccccccccccc----cccccccccccccceEEE
Confidence 5888889888889999999876 44444332 233333334554443 3444444433 699999
Q ss_pred ecC
Q psy9143 98 NNA 100 (100)
Q Consensus 98 ~~A 100 (100)
.|+
T Consensus 64 d~~ 66 (130)
T PF00107_consen 64 DCV 66 (130)
T ss_dssp ESS
T ss_pred Eec
Confidence 874
No 468
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=96.34 E-value=0.065 Score=35.44 Aligned_cols=33 Identities=39% Similarity=0.477 Sum_probs=27.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.+...|+ +|+++++
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~ 224 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDL 224 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcC
Confidence 4678999985 8999999888888898 5887765
No 469
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.34 E-value=0.021 Score=36.80 Aligned_cols=37 Identities=22% Similarity=0.417 Sum_probs=33.7
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 152 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs 188 (282)
T PRK14169 152 IDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHS 188 (282)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECC
Confidence 3578999999999999999999999999999998865
No 470
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=96.32 E-value=0.043 Score=36.90 Aligned_cols=36 Identities=31% Similarity=0.308 Sum_probs=32.4
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.++++-|.|. |.||..+++.+...|++|++.++
T Consensus 112 ~~l~gktvGIIG~-G~IG~~va~~l~a~G~~V~~~Dp 147 (381)
T PRK00257 112 VDLAERTYGVVGA-GHVGGRLVRVLRGLGWKVLVCDP 147 (381)
T ss_pred CCcCcCEEEEECC-CHHHHHHHHHHHHCCCEEEEECC
Confidence 3578999999998 88999999999999999999875
No 471
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.32 E-value=0.018 Score=37.15 Aligned_cols=37 Identities=30% Similarity=0.526 Sum_probs=33.4
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.+.+.|.++-+|..++..|+++|+.|+++..
T Consensus 154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s 190 (284)
T PRK14179 154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS 190 (284)
T ss_pred CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC
Confidence 3578999999999999999999999999999998743
No 472
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=96.32 E-value=0.059 Score=35.89 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=27.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.....|++|++++.
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~ 210 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISR 210 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeC
Confidence 4678899886 89999999988888999888764
No 473
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.30 E-value=0.03 Score=33.24 Aligned_cols=36 Identities=28% Similarity=0.470 Sum_probs=28.0
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
..+.+|.++|.|- |.+|+.+|+.|...|++|++...
T Consensus 19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~ 54 (162)
T PF00670_consen 19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEI 54 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-S
T ss_pred eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEEC
Confidence 4568999999998 99999999999999999999865
No 474
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.29 E-value=0.022 Score=36.79 Aligned_cols=37 Identities=30% Similarity=0.535 Sum_probs=33.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.|+.++|+|.+.-+|..++..|..+|+.|.++.+
T Consensus 160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs 196 (287)
T PRK14176 160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHV 196 (287)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEec
Confidence 3578999999999999999999999999999999865
No 475
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=96.27 E-value=0.022 Score=36.97 Aligned_cols=37 Identities=30% Similarity=0.422 Sum_probs=34.0
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++|+.|.++.+
T Consensus 163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs 199 (299)
T PLN02516 163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHS 199 (299)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC
Confidence 3578999999999999999999999999999999865
No 476
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.26 E-value=0.021 Score=32.88 Aligned_cols=29 Identities=31% Similarity=0.501 Sum_probs=26.0
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 12 AIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
|+|.|+ |.||.-++.+|.+.|++|.+++|
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r 29 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSR 29 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEc
Confidence 467777 88999999999999999999986
No 477
>PLN03139 formate dehydrogenase; Provisional
Probab=96.25 E-value=0.03 Score=37.68 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=32.9
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.++.++++-|.|. |.||..+++.|...|++|+..++.
T Consensus 195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~ 231 (386)
T PLN03139 195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRL 231 (386)
T ss_pred cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCC
Confidence 3578999999996 889999999999999999988764
No 478
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.25 E-value=0.022 Score=36.80 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=33.4
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.||.++|.|.+.-+|..++..|.++++.|.++.+
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs 191 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHS 191 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC
Confidence 578999999999999999999999999999998865
No 479
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.24 E-value=0.059 Score=35.62 Aligned_cols=33 Identities=27% Similarity=0.265 Sum_probs=27.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+++++|.|+ +++|...++.....|+++++++.
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~ 215 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISS 215 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 4678889775 99999999988888999887654
No 480
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.23 E-value=0.078 Score=34.45 Aligned_cols=34 Identities=35% Similarity=0.532 Sum_probs=29.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++|.|+++++|..+++.....|++++.+.+
T Consensus 177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~ 210 (350)
T cd08274 177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG 210 (350)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC
Confidence 4689999999999999999999999999887754
No 481
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.23 E-value=0.024 Score=36.75 Aligned_cols=37 Identities=24% Similarity=0.314 Sum_probs=34.0
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++++.|.++.+
T Consensus 156 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs 192 (294)
T PRK14187 156 RNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHS 192 (294)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCC
Confidence 3578999999999999999999999999999998865
No 482
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=96.23 E-value=0.11 Score=35.28 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=33.3
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.++.||++-|.|. |.||..+++.+...|++|+..++.
T Consensus 147 ~~L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~ 183 (409)
T PRK11790 147 FEVRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIE 183 (409)
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCC
Confidence 3578999999998 999999999999999999998863
No 483
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.21 E-value=0.021 Score=38.90 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=28.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 11 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
++.|+||.|++|.++++.|.+.|++|.+.+++
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 47899998999999999999999999998873
No 484
>PLN02827 Alcohol dehydrogenase-like
Probab=96.20 E-value=0.11 Score=34.54 Aligned_cols=33 Identities=30% Similarity=0.387 Sum_probs=26.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCe-EEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~ 41 (100)
.+.+++|.|+ |++|...++.....|+. |+++++
T Consensus 193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~ 226 (378)
T PLN02827 193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDI 226 (378)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence 4788999986 99999999988888985 666654
No 485
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.20 E-value=0.018 Score=35.12 Aligned_cols=35 Identities=34% Similarity=0.472 Sum_probs=33.2
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEc
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND 40 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~ 40 (100)
++.||.++|.|.+.-+|..++..|.++|+.|.+++
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~ 93 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVD 93 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence 68899999999999999999999999999999985
No 486
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.20 E-value=0.027 Score=36.31 Aligned_cols=36 Identities=33% Similarity=0.569 Sum_probs=33.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.||.++|.|.+.-+|..++..|.++++.|.++.+
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs 189 (282)
T PRK14166 154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHI 189 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC
Confidence 578999999999999999999999999999998865
No 487
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=96.20 E-value=0.092 Score=34.86 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=27.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|.| .+++|..+++.+...|+ +|+++++
T Consensus 190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~ 223 (373)
T cd08299 190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDI 223 (373)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 367888886 58999999999999998 7888865
No 488
>KOG4039|consensus
Probab=96.18 E-value=0.033 Score=33.84 Aligned_cols=38 Identities=18% Similarity=0.039 Sum_probs=33.3
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCC--eEEEEcCC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLG 42 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~ 42 (100)
+.|+++..+|.||+|-.|..+.+++++.+- +|+++.|+
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR 53 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRR 53 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEec
Confidence 567888999999999999999999999873 78888774
No 489
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.18 E-value=0.027 Score=38.17 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=30.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 7 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
...+.++|.|+ |.+|..+++.|.+.|.++++++.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~ 262 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIER 262 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC
Confidence 34678999999 99999999999999999999976
No 490
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=96.17 E-value=0.13 Score=33.50 Aligned_cols=33 Identities=30% Similarity=0.487 Sum_probs=28.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+++++|.| .+++|..+++.+...|.+|+++.+
T Consensus 165 ~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~ 197 (345)
T cd08260 165 PGEWVAVHG-CGGVGLSAVMIASALGARVIAVDI 197 (345)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeC
Confidence 467899999 689999999988889999888755
No 491
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.17 E-value=0.096 Score=34.46 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=27.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCCe-EEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.....|++ |+.+++
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~ 209 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDI 209 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4678999985 99999999988888985 887765
No 492
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=96.16 E-value=0.14 Score=33.80 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=27.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 8 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+++|.|+ +++|...++.....|+ +|+.+++
T Consensus 184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~ 217 (365)
T cd08277 184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDI 217 (365)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence 4678999975 9999999998888898 6887765
No 493
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.16 E-value=0.026 Score=38.26 Aligned_cols=35 Identities=34% Similarity=0.607 Sum_probs=31.5
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.+.+++++|.|+ |.||+.+++.+...|++|+++++
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~ 233 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEV 233 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence 357899999999 79999999999999999998876
No 494
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.16 E-value=0.036 Score=36.20 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=31.9
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
++.|+++.|.|. |.||+++++.+...|++|+..++
T Consensus 144 ~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~ 178 (314)
T PRK06932 144 DVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEH 178 (314)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECC
Confidence 578999999998 99999999999999999998765
No 495
>PLN00106 malate dehydrogenase
Probab=96.15 E-value=0.031 Score=36.74 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=29.1
Q ss_pred CCEEEEecCCCchhHHHHHHHHHcCC--eEEEEcCC
Q psy9143 9 GRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLG 42 (100)
Q Consensus 9 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~ 42 (100)
.+.+.|+|++|.+|..++..|+.++. .++++|.+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~ 53 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIA 53 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecC
Confidence 35799999999999999999997764 68988874
No 496
>PRK14851 hypothetical protein; Provisional
Probab=96.13 E-value=0.12 Score=37.40 Aligned_cols=35 Identities=17% Similarity=0.378 Sum_probs=30.0
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
.+.+.+++|.|+ ||+|..++..|+..|. ++.++|.
T Consensus 40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~ 75 (679)
T PRK14851 40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADF 75 (679)
T ss_pred HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcC
Confidence 356788999997 9999999999999997 6888764
No 497
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.09 E-value=0.033 Score=35.92 Aligned_cols=37 Identities=32% Similarity=0.494 Sum_probs=33.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL 41 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~ 41 (100)
.++.||.++|.|.+.-+|..++..|.++++.|.++.+
T Consensus 153 i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs 189 (282)
T PRK14182 153 VDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHS 189 (282)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC
Confidence 3578999999999999999999999999999998865
No 498
>PRK06153 hypothetical protein; Provisional
Probab=96.09 E-value=0.17 Score=34.20 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=30.3
Q ss_pred CCCCCEEEEecCCCchhHHHHHHHHHcCC-eEEEEcC
Q psy9143 6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL 41 (100)
Q Consensus 6 ~~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~ 41 (100)
++.+.+++|.|+ ||+|..++..|++.|. +++++|.
T Consensus 173 kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~ 208 (393)
T PRK06153 173 KLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDG 208 (393)
T ss_pred HHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECC
Confidence 356788999999 9999999999999996 7888765
No 499
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.08 E-value=0.056 Score=35.57 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=32.8
Q ss_pred CCCCCCEEEEecCCCchhHHHHHHHHHcCCeEEEEcCC
Q psy9143 5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG 42 (100)
Q Consensus 5 ~~~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 42 (100)
.++.||++-|.|. |.||+++++.+...|++|+..++.
T Consensus 142 ~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~ 178 (324)
T COG1052 142 FDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRS 178 (324)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCC
Confidence 3578999999998 999999999999888999999874
No 500
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.07 E-value=0.05 Score=28.89 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=30.6
Q ss_pred EEEecCCCchhHHHHHHHHHcC---CeEEEE-cCCCCCCCCCCChHHHHHHHHHH
Q psy9143 12 AIVTGAGAGLGRSYALLLAERG---ASVVVN-DLGGQRDGDGKSSKAADTVVAEI 62 (100)
Q Consensus 12 ~litG~~~gig~~~~~~l~~~g---~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~ 62 (100)
+-+.| +|.+|.++++.|.+.| .+|.+. +| ++++..++.+++
T Consensus 2 I~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r---------~~~~~~~~~~~~ 46 (96)
T PF03807_consen 2 IGIIG-AGNMGSALARGLLASGIKPHEVIIVSSR---------SPEKAAELAKEY 46 (96)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEES---------SHHHHHHHHHHC
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccC---------cHHHHHHHHHhh
Confidence 44554 4999999999999999 888865 55 666666665544
Done!