RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9145
(111 letters)
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR
{Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 55.6 bits (133), Expect = 4e-12
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
+ + F C A G P P + W K+G E + ++ + ++ D G
Sbjct: 20 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH----WSLIMESVVPSDKG 75
Query: 86 IYECYADNMYNVDTRTFK 103
Y C +N Y T+
Sbjct: 76 NYTCVVENEYGSINHTYH 93
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 51.9 bits (123), Expect = 1e-10
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 24 VLGHKIVFICMAKGKPRPHITWFKDGVEL--------YAHMYVNLHEWHYGTDRIKSKIE 75
V+G + F+C +PHI W K + ++ V TD+ +
Sbjct: 18 VVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLY 77
Query: 76 IDPATQMDAGIYECYADNMYNVDTRTFK 103
I T DAG Y C A N + +
Sbjct: 78 IRNVTFEDAGEYTCLAGNSIGISFHSAW 105
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 49.8 bits (118), Expect = 7e-10
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 5/78 (6%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G + G TW K ++ ++ + G+ K+ I A Q G
Sbjct: 15 GESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGS-----KLTILAARQEHCG 69
Query: 86 IYECYADNMYNVDTRTFK 103
Y +N
Sbjct: 70 CYTLLVENKLGSRQAQVN 87
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 49.6 bits (117), Expect = 1e-09
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 24 VLGHKIVFICMAKGKPRPHITWFKDGVEL--YAHMYVNLHEWHYGTDRIKSKIEIDPATQ 81
V H G+P P + W +G L + ++ E + ++ T
Sbjct: 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTH 72
Query: 82 MDAGIYECYADNMYNVDTRTFK 103
++ G Y A N + + +
Sbjct: 73 VNNGNYTLLAANPFGQASASIM 94
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 49.1 bits (116), Expect = 1e-09
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 25 LGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 84
LG + +C A G P P ++W KDG + + + S++ I + D
Sbjct: 19 LGQSVTLVCDADGFPEPTMSWTKDGEPIENEEE---DDEKHIFSDDSSELTIRNVDKNDE 75
Query: 85 GIYECYADNMYNVDTRTFK 103
Y C A+N +
Sbjct: 76 AEYVCIAENKAGEQDASIH 94
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 48.8 bits (115), Expect = 2e-09
Identities = 19/88 (21%), Positives = 30/88 (34%)
Query: 16 QVKYFPLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIE 75
+ + H KG P+P + WF +G L Y+ ++
Sbjct: 6 TITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQ 65
Query: 76 IDPATQMDAGIYECYADNMYNVDTRTFK 103
+D T M+ G Y A N Y D +
Sbjct: 66 LDNPTHMNNGDYTLIAKNEYGKDEKQIS 93
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 46.9 bits (110), Expect = 9e-09
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G + C +G P I W KDG + + + + + + DAG
Sbjct: 11 GQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWI---GFLSLKSVERSDAG 67
Query: 86 IYECYADNMYNVDT 99
Y C ++ +
Sbjct: 68 RYWCQVEDGGETEI 81
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 46.9 bits (110), Expect = 1e-08
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 20 FPLSV-LGHKIVFICMAK-GKPRPHITWFKDGVELYA---HMYVNLHEWHYGTDRIKSKI 74
P SV +G++ V C G P +WFKDG+ + + D +
Sbjct: 10 VPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDL 69
Query: 75 EIDPATQMDAGIYECYADNMYNVDTRT 101
DP T D+G Y C A N Y R+
Sbjct: 70 IFDPVTAFDSGEYYCQAQNGYGTAMRS 96
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 45.9 bits (108), Expect = 2e-08
Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 10/78 (12%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G + C G P P++ W + L + I D G
Sbjct: 18 GQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSG----------LVIKGVKNGDKG 67
Query: 86 IYECYADNMYNVDTRTFK 103
Y C A N +
Sbjct: 68 YYGCRATNEHGDKYFETL 85
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 45.0 bits (105), Expect = 6e-08
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 20 FPLSV-LGHKIVFICMAK-GKPRPHITWFKDGVE--LYAHMYVNLHEWHYGTDRIKSKIE 75
P S +G++ V C + G P TWFKDG+ Y + ++
Sbjct: 10 IPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELV 69
Query: 76 IDPATQMDAGIYECYADNMYNVDTRT 101
DP + D G Y C A N Y +
Sbjct: 70 FDPLSASDTGEYSCEARNGYGTPMTS 95
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 91
Score = 43.7 bits (102), Expect = 2e-07
Identities = 18/78 (23%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G F C G+P P +TW + + T + KS EI D G
Sbjct: 14 GESARFSCDTDGEPVPTVTWLR-----KGQVLSTSARHQVTTTKYKSTFEISSVQASDEG 68
Query: 86 IYECYADNMYNVDTRTFK 103
Y +N F
Sbjct: 69 NYSVVVENSEGKQEAEFT 86
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 43.3 bits (101), Expect = 2e-07
Identities = 18/80 (22%), Positives = 25/80 (31%), Gaps = 11/80 (13%)
Query: 24 VLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMD 83
+ G + C A G P P I W + + I D
Sbjct: 18 LTGQMVTLECFAFGNPVPQIKW-----------RKLDGSQTSKWLSSEPLLHIQNVDFED 66
Query: 84 AGIYECYADNMYNVDTRTFK 103
G YEC A+N+ DT +
Sbjct: 67 EGTYECEAENIKGRDTYQGR 86
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 98
Score = 42.2 bits (98), Expect = 6e-07
Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G F GKP P W+K+GV++ + Y + ++ I T D+
Sbjct: 19 GSDAHFRVRVVGKPDPECEWYKNGVKIERSD----RIYWYWPEDNVCELVIRDVTGEDSA 74
Query: 86 IYECYADNMYNVDTRTFK 103
A N+ +
Sbjct: 75 SIMVKAINIAGETSSHAF 92
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 41.5 bits (96), Expect = 1e-06
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Query: 16 QVKYFPLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIE 75
+V L + + +G P P + W +G L +++ + G + +
Sbjct: 7 RVVSLEEPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEIS-EGCLL 65
Query: 76 IDPATQMDAGIYECYADNMYNVDTRTFK 103
+ T + G Y A N +T
Sbjct: 66 FNKPTHYNNGNYTLIAKNPLGTANQTIN 93
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 41.0 bits (95), Expect = 2e-06
Identities = 17/78 (21%), Positives = 21/78 (26%), Gaps = 5/78 (6%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G F C P +TW KD EL + + I+ D G
Sbjct: 16 GQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGN-----DYGLTINRVKGDDKG 70
Query: 86 IYECYADNMYNVDTRTFK 103
Y A N Y
Sbjct: 71 EYTVRAKNSYGTKEEIVF 88
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 40.7 bits (94), Expect = 2e-06
Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 6/76 (7%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G V +C P I W G ++ V +I+ + D G
Sbjct: 16 GEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRG------IKKTDEG 69
Query: 86 IYECYADNMYNVDTRT 101
Y C + +
Sbjct: 70 TYRCEGRILARGEINF 85
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 40.8 bits (94), Expect = 3e-06
Identities = 15/102 (14%), Positives = 26/102 (25%), Gaps = 24/102 (23%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYG------------------- 66
G+K+ G P P + W K + +
Sbjct: 24 GNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEG 83
Query: 67 -----TDRIKSKIEIDPATQMDAGIYECYADNMYNVDTRTFK 103
T + +S ++ A + D G+Y N D
Sbjct: 84 RVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLT 125
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 40.0 bits (92), Expect = 5e-06
Identities = 6/71 (8%), Positives = 12/71 (16%), Gaps = 6/71 (8%)
Query: 26 GHKIVFICMAKG---KPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQM 82
G C + F+ L+ + +
Sbjct: 17 GKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATAT---FNSTADRED 73
Query: 83 DAGIYECYADN 93
+ C A
Sbjct: 74 GHRNFSCLAVL 84
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 39.5 bits (91), Expect = 6e-06
Identities = 18/76 (23%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 20 FPLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPA 79
FP K+ C A+ P W +G EL + +P
Sbjct: 16 FPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL------VISNPV 69
Query: 80 TQMDAGIYECYADNMY 95
DAG Y+C A N
Sbjct: 70 KAKDAGSYQCVATNAR 85
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 39.5 bits (91), Expect = 7e-06
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G + CM P + +FK+G ++ + + + + ++ D G
Sbjct: 18 GDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSG---KRLLFKTTLPEDEG 74
Query: 86 IYECYADN 93
+Y C DN
Sbjct: 75 VYTCEVDN 82
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 39.2 bits (90), Expect = 9e-06
Identities = 16/69 (23%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Query: 26 GHKIVFICMAKGKP-RPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 84
G C K RPH+TW K + W + + +P D
Sbjct: 18 GDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDN 77
Query: 85 GIYECYADN 93
G Y C A+
Sbjct: 78 GSYRCSANF 86
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId:
9103]}
Length = 102
Score = 38.7 bits (89), Expect = 1e-05
Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G F C +G P P + WFKD + + + G + I D
Sbjct: 23 GSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEG----NCSLTISEVCGDDDA 78
Query: 86 IYECYADNMYNVDTRTFK 103
Y C A N T T +
Sbjct: 79 KYTCKAVNSLGEATCTAE 96
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 38.2 bits (88), Expect = 1e-05
Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Query: 24 VLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMD 83
G ++ C + ++ WFK+G E+ + + K + I+ AT+ D
Sbjct: 13 YCGERVELECEV-SEDDANVKWFKNGEEIIPGPK---SRYRIRVEGKKHILIIEGATKAD 68
Query: 84 AGIYECYADN 93
A Y
Sbjct: 69 AAEYSVMTTG 78
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 38.3 bits (88), Expect = 2e-05
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 24 VLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMD 83
+G + + C+A GKPRP + W +DG L + + + D
Sbjct: 14 DIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGEL---------RFSKLVLED 64
Query: 84 AGIYECYADNMYNVDTRTFK 103
+G+Y+C A+N + + +
Sbjct: 65 SGMYQCVAENKHGTVYASAE 84
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 38.1 bits (87), Expect = 2e-05
Identities = 14/77 (18%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G F C A G+ + G+ + R + + T+ DAG
Sbjct: 16 GQFATFQCSAIGRTVAGDRLWLQGI--DVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAG 73
Query: 86 IYECYADNMYNVDTRTF 102
Y C V +
Sbjct: 74 KYRCMIRTEGGVGISNY 90
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 37.8 bits (86), Expect = 4e-05
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 8/87 (9%)
Query: 25 LGHKIVFICMAKGKPRPHITWFKDGVE-------LYAHMYVNLHEWHYGTDRIKSKIEID 77
LG +I IC G+ W +G L Y + + + + + I
Sbjct: 16 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNIS 75
Query: 78 PATQMDAGI-YECYADNMYNVDTRTFK 103
+ C+A N + +D +
Sbjct: 76 EIESRFYKHPFTCFAKNTHGIDAAYIQ 102
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 36.4 bits (83), Expect = 1e-04
Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 5/68 (7%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
GHKI + W K+G E+ ++ + + K + I + D
Sbjct: 21 GHKIRLTVEL-ADHDAEVKWLKNGQEIQMSG----SKYIFESIGAKRTLTISQCSLADDA 75
Query: 86 IYECYADN 93
Y+C
Sbjct: 76 AYQCVVGG 83
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 35.7 bits (81), Expect = 1e-04
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 6/75 (8%)
Query: 24 VLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIK-----SKIEIDP 78
V+ + F + P + W K ++ + +R+ + I
Sbjct: 8 VVYGNVTFHVPS-NVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYN 66
Query: 79 ATQMDAGIYECYADN 93
T D YE + N
Sbjct: 67 LTSSDEDEYEMESPN 81
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 35.3 bits (80), Expect = 3e-04
Identities = 9/71 (12%), Positives = 17/71 (23%), Gaps = 9/71 (12%)
Query: 24 VLGHKIVFICMAK-GKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQM 82
+ G + C + + W +H + +
Sbjct: 19 LPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRR--------LLLRSVQLH 70
Query: 83 DAGIYECYADN 93
D+G Y CY
Sbjct: 71 DSGNYSCYRAG 81
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 35.4 bits (80), Expect = 3e-04
Identities = 15/85 (17%), Positives = 21/85 (24%), Gaps = 7/85 (8%)
Query: 26 GHKIVFICMAKGKP---RPHITWFKDGVELYA----HMYVNLHEWHYGTDRIKSKIEIDP 78
G I F G P + WFK + + + ++ I
Sbjct: 19 GGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITD 78
Query: 79 ATQMDAGIYECYADNMYNVDTRTFK 103
A G Y C D F
Sbjct: 79 AQPAFTGGYRCEVSTKDKFDCSNFN 103
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 34.6 bits (78), Expect = 4e-04
Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 26 GHKIVFICMAK-GKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 84
G + FIC AK P + W + ++ + + I DA
Sbjct: 17 GADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFN----------GILTIRNVQPSDA 66
Query: 85 GIYECYADNMYNVDTRTFK 103
G Y C NM+ +D T
Sbjct: 67 GTYVCTGSNMFAMDQGTAT 85
>d1l6xa2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 34.6 bits (79), Expect = 4e-04
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 16 QVKYFPLS---VLGHKIVFICMAKG--KPRPHITWFKDGVELYAHMYVNLHEWHYGTDRI 70
QV P S + +++ C+ KG + W +G + G+ +
Sbjct: 6 QVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL 65
Query: 71 KSKIEIDPATQMDAGIYEC 89
SK+ +D + ++ C
Sbjct: 66 YSKLTVDKSRWQQGNVFSC 84
>d1fp5a2 b.1.1.2 (A:439-543) Immunoglobulin heavy chain epsilon
constant domain 4, CH4-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 34.7 bits (79), Expect = 5e-04
Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 7/81 (8%)
Query: 16 QVKYFPLS---VLGHKIVFICMAKGK--PRPHITWFKDGVELYAHMYVNLH--EWHYGTD 68
+V F K C+ + + W + V+L + +
Sbjct: 6 EVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGF 65
Query: 69 RIKSKIEIDPATQMDAGIYEC 89
+ S++E+ A + C
Sbjct: 66 FVFSRLEVTRAEWEQKDEFIC 86
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 34.3 bits (77), Expect = 6e-04
Identities = 11/81 (13%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHY--GTDRIKSKIEIDPATQMD 83
G + +C ++ P + + +N E + + + +S++ I+
Sbjct: 17 GETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA 76
Query: 84 -AGIYECYADNMYNVDTRTFK 103
G Y C + D
Sbjct: 77 DPGQYRCNGTSSKGSDQAIIT 97
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 33.8 bits (76), Expect = 8e-04
Identities = 15/78 (19%), Positives = 20/78 (25%), Gaps = 5/78 (6%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G G P P TW E + I A + D+G
Sbjct: 17 GFTHNLEVDFIGAPDPTATWTV-----GDSGAALAPELLVDAKSSTTSIFFPSAKRADSG 71
Query: 86 IYECYADNMYNVDTRTFK 103
Y+ N D F+
Sbjct: 72 NYKLKVKNELGEDEAIFE 89
>d1k5nb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 33.4 bits (76), Expect = 0.001
Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 7/78 (8%)
Query: 16 QVKYFPLS--VLGHKIVFICMAKGKPRPHI--TWFKDGVELYAHMYVNLHEWHYGTDRIK 71
+++ + G C G I K+G + + +L + +
Sbjct: 7 KIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLL 66
Query: 72 SKIEIDPATQMDAGIYEC 89
E P + Y C
Sbjct: 67 YYTEFTPT---EKDEYAC 81
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 33.0 bits (74), Expect = 0.001
Identities = 14/78 (17%), Positives = 18/78 (23%), Gaps = 18/78 (23%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
+ +C A G P P + KDG G
Sbjct: 19 NSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD------------------LEG 60
Query: 86 IYECYADNMYNVDTRTFK 103
Y C A + TR
Sbjct: 61 TYLCRARSTQGEVTREVT 78
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 33.1 bits (74), Expect = 0.002
Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Query: 24 VLGHKIVFICMAKGKPRPHITWF-KDGVELYAHMYVNLHEWHYGTDR-IKSKIEIDPAT- 80
+ G K C + P P + L + T+ + S + I
Sbjct: 19 LHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVR 78
Query: 81 QMDAGIYECYADNMYNVDTRTFK 103
IY C A N + DT +
Sbjct: 79 ADFQTIYNCTAWNSFGSDTEIIR 101
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 32.9 bits (74), Expect = 0.002
Identities = 8/88 (9%), Positives = 22/88 (25%), Gaps = 21/88 (23%)
Query: 19 YFPLSV----------LGHKIVFICMAKG---KPRPHITWFKDGVELYAHMYVNLHEWHY 65
+ P V +G ++ C +G + + + + EL
Sbjct: 2 WTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKEL--------KREPA 53
Query: 66 GTDRIKSKIEIDPATQMDAGIYECYADN 93
+ + + + C +
Sbjct: 54 VGEPAEVTTTVLVRRDHHGAQFSCRTEL 81
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 32.8 bits (74), Expect = 0.002
Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Query: 21 PLSVLGHKIVFICMAKG-KPRP-HITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDP 78
I +C+ G P ITW +DG + + +S++ +
Sbjct: 16 GGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQ 75
Query: 79 ATQMDAGIYEC 89
+ Y C
Sbjct: 76 KHWLSDRTYTC 86
>d1i1ca2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 102
Score = 32.3 bits (73), Expect = 0.003
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Query: 16 QVKYFPLS---VLGHKIVFICMAKG-KPRPH-ITWFKDGVELYAHMYVNLHEWHYGTDRI 70
QV + ++ CM KG P W +G + G+ +
Sbjct: 6 QVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFL 65
Query: 71 KSKIEIDPATQMDAGIYEC 89
SK+ + T + C
Sbjct: 66 YSKLNVKKETWQQGNTFTC 84
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 32.7 bits (73), Expect = 0.003
Identities = 20/85 (23%), Positives = 29/85 (34%), Gaps = 7/85 (8%)
Query: 26 GHKIVFICMAKGKP---RPHITWFKDGVELYAHMYVNLHEWHYGTDRI----KSKIEIDP 78
G I FI K + +P I WFK A + +R +++I
Sbjct: 15 GEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIK 74
Query: 79 ATQMDAGIYECYADNMYNVDTRTFK 103
A AG Y C D+ +F
Sbjct: 75 AKDNFAGNYRCEVTYKDKFDSCSFD 99
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 32.0 bits (71), Expect = 0.004
Identities = 16/81 (19%), Positives = 21/81 (25%), Gaps = 3/81 (3%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRI---KSKIEIDPATQM 82
I C G P + W A + N DR+ S I T+
Sbjct: 16 NESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRK 75
Query: 83 DAGIYECYADNMYNVDTRTFK 103
D G Y C +
Sbjct: 76 DNGEYTCMVSEEGGQNYGEVS 96
>d1mjul2 b.1.1.2 (L:108-214) Immunoglobulin light chain kappa
constant domain, CL-kappa {Mouse (Mus musculus) [TaxId:
10090]}
Length = 107
Score = 32.0 bits (72), Expect = 0.004
Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 7/81 (8%)
Query: 16 QVKYFPLS---VLGHKIVFICMAKG--KPRPHITWFKDGVELYAHMYVNLHEWHY--GTD 68
V FP S + +C ++ W DG E + + + T
Sbjct: 7 TVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTY 66
Query: 69 RIKSKIEIDPATQMDAGIYEC 89
+ S + + Y C
Sbjct: 67 SMSSTLTLTKDEYERHNSYTC 87
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 32.2 bits (72), Expect = 0.004
Identities = 16/79 (20%), Positives = 23/79 (29%), Gaps = 6/79 (7%)
Query: 26 GHKIVFICMA-KGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 84
V C + + ITW+KD + + K K+ PA D+
Sbjct: 17 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH-----KEKLWFVPAKVEDS 71
Query: 85 GIYECYADNMYNVDTRTFK 103
G Y C N
Sbjct: 72 GHYYCVVRNSSYCLRIKIS 90
>d1igtb4 b.1.1.2 (B:363-474) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Mouse (Mus musculus),
gamma2 [TaxId: 10090]}
Length = 102
Score = 31.9 bits (72), Expect = 0.004
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 5/79 (6%)
Query: 16 QVKYFPLS---VLGHKIVFICMAKG-KPRP-HITWFKDGVELYAHMYVNLHEWHYGTDRI 70
QV P + ++ CM P ++ W +G + G+ +
Sbjct: 6 QVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFM 65
Query: 71 KSKIEIDPATQMDAGIYEC 89
SK+ ++ ++ Y C
Sbjct: 66 YSKLRVEKKNWVERNSYSC 84
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 32.1 bits (72), Expect = 0.005
Identities = 12/91 (13%), Positives = 22/91 (24%), Gaps = 14/91 (15%)
Query: 25 LGHKIVFIC------MAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDP 78
+ +C + P + W+KD L K ++ +
Sbjct: 13 VAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGV--------KDRLIVMN 64
Query: 79 ATQMDAGIYECYADNMYNVDTRTFKTDFSIT 109
+ G Y C+A Y
Sbjct: 65 VAEKHRGNYTCHASYTYLGKQYPITRVIEFI 95
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 31.9 bits (71), Expect = 0.005
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
+ V C+ +G + +K N E + + + + D G
Sbjct: 17 NNPTVLECIIEGNDQGVKYSWK-----KDGKSYNWQEHNAALRKDEGSLVFLRPQASDEG 71
Query: 86 IYECYADNMY 95
Y+C+A+
Sbjct: 72 HYQCFAETPA 81
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 31.6 bits (70), Expect = 0.006
Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G ++ C +G+ W +E A + + + + ++
Sbjct: 17 GDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSL------GLTLANVTSDLNRK 70
Query: 86 IYECYADNMYNVDTRTFK 103
C+A+N + +
Sbjct: 71 NVTCWAENDVGRAEVSVQ 88
>d1nfde2 b.1.1.2 (E:108-215) Immunoglobulin light chain lambda
constant domain, CL-lambda {Hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 104
Score = 31.2 bits (70), Expect = 0.009
Identities = 11/93 (11%), Positives = 25/93 (26%), Gaps = 5/93 (5%)
Query: 16 QVKYFPLS---VLGHKIVFICMAKGK--PRPHITWFKDGVELYAHMYVNLHEWHYGTDRI 70
+V FP S + +K +C+ +TW +G + +
Sbjct: 7 KVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMT 66
Query: 71 KSKIEIDPATQMDAGIYECYADNMYNVDTRTFK 103
S + + C + ++
Sbjct: 67 SSYLSLTADQWKSHNRVSCQVTHEGETVEKSLS 99
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 30.8 bits (68), Expect = 0.012
Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Query: 26 GHKIVFICMA-KGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 84
G ++F C P W + + + I D
Sbjct: 19 GWGVMFTCSPPPHYPALSYRWLL-----NEFPNFIPADGRRFVSQTTGNLYIAKTEASDL 73
Query: 85 GIYECYADNMYNVDTRTFKTDF 106
G Y C+A + + T++ + F
Sbjct: 74 GNYSCFATSHIDFITKSVFSKF 95
>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}
Length = 101
Score = 30.8 bits (69), Expect = 0.012
Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 16 QVKYFPLS--VLGHKIVFICMAKG--KPRPHITWFKDGVELYAHMY-VNLHEWHYGTDRI 70
+V S LG + IC P ++TW ++G + + R
Sbjct: 7 EVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRK 66
Query: 71 KSKIEIDPATQMDAGIYEC 89
+ P+ Y+C
Sbjct: 67 FHYLTFLPS---TDDFYDC 82
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 30.5 bits (68), Expect = 0.013
Identities = 13/68 (19%), Positives = 17/68 (25%), Gaps = 6/68 (8%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G F +P H W G L A + E K + + G
Sbjct: 16 GETAHFEIEL-SEPDVHGQWKLKGQPLTASPDCEIIEDGK-----KHILILHNCQLGMTG 69
Query: 86 IYECYADN 93
A N
Sbjct: 70 EVSFQAAN 77
>d1d5mb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DR group [TaxId:
9606]}
Length = 98
Score = 30.0 bits (67), Expect = 0.019
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 16 QVKYFPLS--VLGHKIVFICMAKGKPRPHI--TWFKDGVELYAHMY-VNLHEWHYGTDRI 70
+V +P L H + +C G I WF++G E + L + T +
Sbjct: 6 EVTVYPAKTQPLQHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQT 65
Query: 71 KSKIEIDPATQMDAGIYEC 89
+E P +Y C
Sbjct: 66 LVMLETVPR---SGEVYTC 81
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 29.6 bits (66), Expect = 0.028
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 16 QVKYFPLS--VLGHKIVFICMAKG-KPRP-HITWFKDGVELYAHMY-VNLHEWHYGTDRI 70
+V F S LG IC+ P +ITW +G + + + +
Sbjct: 7 EVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFK 66
Query: 71 KSKIEIDPATQMDAGIYEC 89
S + P+ IY+C
Sbjct: 67 ISYLTFLPS---ADEIYDC 82
>d1uvqb1 b.1.1.2 (B:95-191) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 97
Score = 29.6 bits (66), Expect = 0.028
Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 16 QVKYFPLS--VLGHKIVFICMAKG-KPRP-HITWFKDGVELYAHMY-VNLHEWHYGTDRI 70
V P L H + +C P + WF++ E A + L T +I
Sbjct: 4 TVTISPSRTEALNHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQI 63
Query: 71 KSKIEIDPATQMDAGIYEC 89
+E+ P +Y C
Sbjct: 64 LVMLEMTP---QRGDVYTC 79
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 29.2 bits (65), Expect = 0.046
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 6/68 (8%)
Query: 25 LGHKIVFICMAKG-KPRP-HITWFKDGVELYAHMY-VNLHEWHYGTDRIKSKIEIDPATQ 81
++ C G P ITW K+G + T + S + + P+
Sbjct: 16 TREPVMLACYVWGFYPAEVTITWRKNGKLVMHSSAHKTAQPNGDWTYQTLSHLALTPS-- 73
Query: 82 MDAGIYEC 89
Y C
Sbjct: 74 -YGDTYTC 80
>d1cqka_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant
domain 3, CH3-gamma {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 28.5 bits (63), Expect = 0.074
Identities = 11/79 (13%), Positives = 22/79 (27%), Gaps = 5/79 (6%)
Query: 16 QVKYFPLS---VLGHKIVFICMAKG--KPRPHITWFKDGVELYAHMYVNLHEWHYGTDRI 70
QV P + + CM + W +G + G+ +
Sbjct: 5 QVYTIPPPLEQMAKDLVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDTDGSYFV 64
Query: 71 KSKIEIDPATQMDAGIYEC 89
SK+ + + + C
Sbjct: 65 YSKLNVQKSNWEAGNTFTC 83
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 28.9 bits (63), Expect = 0.090
Identities = 7/88 (7%), Positives = 17/88 (19%)
Query: 16 QVKYFPLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIE 75
++ + + + E K +
Sbjct: 25 RISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALR 84
Query: 76 IDPATQMDAGIYECYADNMYNVDTRTFK 103
I D G Y C+ + + +
Sbjct: 85 IQNVRFSDEGGYTCFFRDHSYQEEAAVE 112
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 28.1 bits (62), Expect = 0.096
Identities = 12/66 (18%), Positives = 17/66 (25%), Gaps = 5/66 (7%)
Query: 25 LGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 84
L + C A Y + L W+ + ID A
Sbjct: 20 LDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWN----ETDPEFVIDHMDANKA 74
Query: 85 GIYECY 90
G Y+C
Sbjct: 75 GRYQCQ 80
>d1lk2b_ b.1.1.2 (B:) beta2-microglobulin {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 28.1 bits (62), Expect = 0.10
Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 7/78 (8%)
Query: 16 QVKYFPLS--VLGHKIVFICMAKG-KPRP-HITWFKDGVELYAHMYVNLHEWHYGTDRIK 71
Q++ + G + C P I K+G ++ ++ + I
Sbjct: 6 QIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYIL 65
Query: 72 SKIEIDPATQMDAGIYEC 89
+ E P + Y C
Sbjct: 66 AHTEFTP---TETDTYAC 80
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 27.6 bits (60), Expect = 0.14
Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 14/71 (19%)
Query: 26 GHKIVFICMAK-GKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 84
G IV C + KP +T+F+ + R I A +
Sbjct: 15 GETIVLRCHSWKDKPLVKVTFFQ-------------NGKSKKFSRSDPNFSIPQANHSHS 61
Query: 85 GIYECYADNMY 95
G Y C + Y
Sbjct: 62 GDYHCTGNIGY 72
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 27.2 bits (59), Expect = 0.21
Identities = 11/75 (14%), Positives = 18/75 (24%), Gaps = 14/75 (18%)
Query: 26 GHKIVFICMAKG-KPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 84
I C + +T+ ++ S I AT D+
Sbjct: 17 EDPIHLRCHSWKNTALHKVTYLQN-------------GKDRKYFHHNSDFHIPKATLKDS 63
Query: 85 GIYECYADNMYNVDT 99
G Y C +
Sbjct: 64 GSYFCRGLVGSKNVS 78
>d1muja1 b.1.1.2 (A:84-183) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}
Length = 100
Score = 27.3 bits (60), Expect = 0.21
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 16 QVKYFPLS--VLGHKIVFICMAKG--KPRPHITWFKDGVELYAHMYVNLHEWHY-GTDRI 70
Q FP S +LG IC P +ITW ++ + +Y + +
Sbjct: 5 QATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHK 64
Query: 71 KSKIEIDPATQMDAGIYEC 89
S + P D IY+C
Sbjct: 65 LSYLTFIP---SDDDIYDC 80
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 26.4 bits (57), Expect = 0.36
Identities = 12/68 (17%), Positives = 17/68 (25%), Gaps = 14/68 (20%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
+ C P + T + S ID AT D+G
Sbjct: 20 KDSVTLKCQGAYSPEDNSTQW--------------FHNESLISSQASSYFIDAATVNDSG 65
Query: 86 IYECYADN 93
Y C +
Sbjct: 66 EYRCQTNL 73
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 26.6 bits (57), Expect = 0.40
Identities = 13/84 (15%), Positives = 20/84 (23%), Gaps = 3/84 (3%)
Query: 24 VLGHKIVFICMAKGKPR-PHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKI--EIDPAT 80
+ G C+ P ITW K + V + + +
Sbjct: 15 IEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKED 74
Query: 81 QMDAGIYECYADNMYNVDTRTFKT 104
D Y C A N +
Sbjct: 75 VSDIYKYVCTAKNAAVDEEVVLVE 98
>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 26.2 bits (57), Expect = 0.54
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 21 PLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPAT 80
P+ G + C ++ K+G + + L+ + ++ + P +
Sbjct: 13 PVVNSGGNVTLQCDSQV-AFDGFILCKEGEDEHPQC---LNSQPHARGSSRAIFSVGPVS 68
Query: 81 QMDAGIYECY 90
Y CY
Sbjct: 69 PSRRWWYRCY 78
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 25.7 bits (55), Expect = 0.71
Identities = 5/68 (7%), Positives = 15/68 (22%), Gaps = 14/68 (20%)
Query: 32 ICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAGIYECYA 91
I W++ ++ + ++ C A
Sbjct: 23 CEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLN--------------VTGVTQSTMFSCEA 68
Query: 92 DNMYNVDT 99
N+ + +
Sbjct: 69 HNLKGLAS 76
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 98
Score = 25.4 bits (55), Expect = 0.96
Identities = 12/86 (13%), Positives = 23/86 (26%), Gaps = 6/86 (6%)
Query: 24 VLGHKIVFIC--MAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSK--IEIDPA 79
LGH I + W + + G I + ++I
Sbjct: 8 ALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNL 67
Query: 80 TQMDAGIYECYADNMY--NVDTRTFK 103
T+ D+G Y + + +
Sbjct: 68 TRDDSGTYNVTVYSTNGTRILNKALD 93
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 25.6 bits (55), Expect = 1.0
Identities = 10/106 (9%), Positives = 22/106 (20%), Gaps = 2/106 (1%)
Query: 4 EDSSLSLKRSCQQVKYFPLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEW 63
+L + +S + + +W
Sbjct: 15 SQVTLHCSFWSSEWVSDDISFTWRY--QPEGGRDAISIFHYAKGQPYIDEVGTFKERIQW 72
Query: 64 HYGTDRIKSKIEIDPATQMDAGIYECYADNMYNVDTRTFKTDFSIT 109
I I D G + C N ++ +T + +
Sbjct: 73 VGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF 118
>d1i1ca1 b.1.1.2 (A:239-341) Immunoglobulin heavy chain gamma
constant domain 2, CH2-gamma {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 103
Score = 24.9 bits (54), Expect = 1.7
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Query: 22 LSVLGHKIVFICMAKG-KPRPH---ITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEID 77
+ G C+ +WF D VE++ + T R S++ I
Sbjct: 12 VLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIV 71
Query: 78 PATQMDAGIYEC 89
++ ++C
Sbjct: 72 ERDWLNGKTFKC 83
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 24.6 bits (52), Expect = 2.0
Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 8/76 (10%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G C K F V E + + I ++ D+G
Sbjct: 12 GGTAELKCSQKSNLARVFWKF--------QNGVLKAESPKYGLMGRKNLLIFNLSEGDSG 63
Query: 86 IYECYADNMYNVDTRT 101
+Y+C ++ T
Sbjct: 64 VYQCLSEERVKNKTVF 79
>d2btva_ e.28.1.1 (A:) BTV vp3 {Bluetongue virus, strain 1 [TaxId:
40051]}
Length = 845
Score = 24.8 bits (54), Expect = 2.7
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 4/37 (10%)
Query: 69 RIKSKIEIDPATQMDAGIYE----CYADNMYNVDTRT 101
+I +DPA +M AG+ N+
Sbjct: 302 KIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNM 338
>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human
(Homo sapiens), p58-cl42 kir [TaxId: 9606]}
Length = 96
Score = 24.2 bits (52), Expect = 2.9
Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 5/70 (7%)
Query: 21 PLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPAT 80
PL ++ C + + + + H+ K+ I T
Sbjct: 11 PLVKSEETVILQCWSDVMFEHFLLHREGMFNDTLRLIGEHHDGVS-----KANFSISRMT 65
Query: 81 QMDAGIYECY 90
Q AG Y CY
Sbjct: 66 QDLAGTYRCY 75
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 24.4 bits (52), Expect = 3.0
Identities = 8/90 (8%), Positives = 16/90 (17%)
Query: 4 EDSSLSLKRSCQQVKYFPLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEW 63
E + ++ S + + +
Sbjct: 15 EGMCVHVRCSFSYPVDSQTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHL 74
Query: 64 HYGTDRIKSKIEIDPATQMDAGIYECYADN 93
+ I A DAG Y +
Sbjct: 75 LGDPQTKNCTLSIRDARMSDAGRYFFRMEK 104
>d1u58a1 b.1.1.2 (A:145-242) Immunomodulatory protein m144,
alpha-3 domain {Murine cytomegalovirus [TaxId: 10366]}
Length = 98
Score = 23.9 bits (51), Expect = 3.2
Identities = 12/69 (17%), Positives = 20/69 (28%), Gaps = 10/69 (14%)
Query: 28 KIVFICMAKG-KPRP-HITWFKDGVELYAHMYVNLHEWH-----YGTDRIKSKIEIDPAT 80
+ C A+ P I W+KD A + G + + +D
Sbjct: 16 GMRLRCFARDYYPADLEIRWWKDDGGGGALPQTSKQHHDPLPSGNGLYQKHIDVYVDGG- 74
Query: 81 QMDAGIYEC 89
+Y C
Sbjct: 75 --LEHVYSC 81
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia
coli [TaxId: 562]}
Length = 235
Score = 24.0 bits (51), Expect = 4.4
Identities = 11/50 (22%), Positives = 16/50 (32%)
Query: 13 SCQQVKYFPLSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHE 62
QV + V C RPH+ WF + +Y+ L
Sbjct: 118 QSGQVLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSM 167
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 23.4 bits (49), Expect = 4.8
Identities = 11/68 (16%), Positives = 17/68 (25%), Gaps = 12/68 (17%)
Query: 26 GHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 85
G + C + + Y + + I I AT D+G
Sbjct: 15 GQPLFLRCHGWRNWDVYKVIY------YKDGEALKYWYEN------HNISITNATVEDSG 62
Query: 86 IYECYADN 93
Y C
Sbjct: 63 TYYCTGKV 70
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 23.7 bits (50), Expect = 5.4
Identities = 10/85 (11%), Positives = 24/85 (28%), Gaps = 18/85 (21%)
Query: 22 LSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSK-------- 73
+ C + + + + V + L+E + G ++ S
Sbjct: 5 QAYFNETADLPC--QFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRT 62
Query: 74 --------IEIDPATQMDAGIYECY 90
+ + D G+Y+C
Sbjct: 63 SFDSDSWTLRLHNLQIKDKGLYQCI 87
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 23.2 bits (49), Expect = 7.4
Identities = 12/84 (14%), Positives = 21/84 (25%), Gaps = 12/84 (14%)
Query: 22 LSVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNL-----HEWHYGTDRIKSKIE- 75
L G + C A K W + + + D +S +
Sbjct: 5 LGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQ 64
Query: 76 ------IDPATQMDAGIYECYADN 93
I D+ Y C ++
Sbjct: 65 GNFPLIIKNLKIEDSDTYICEVED 88
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 22.9 bits (48), Expect = 8.2
Identities = 9/78 (11%), Positives = 15/78 (19%), Gaps = 10/78 (12%)
Query: 23 SVLGHKIVFICMAKGKPRPHITWFKDGVELYAHMYVNLHEWHYGTDRIKSK--------- 73
+ C + + + K++
Sbjct: 6 KEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNL 65
Query: 74 -IEIDPATQMDAGIYECY 90
I I D G YEC
Sbjct: 66 SIVILALRPSDEGTYECV 83
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.137 0.439
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 441,598
Number of extensions: 19196
Number of successful extensions: 182
Number of sequences better than 10.0: 1
Number of HSP's gapped: 152
Number of HSP's successfully gapped: 96
Length of query: 111
Length of database: 2,407,596
Length adjustment: 70
Effective length of query: 41
Effective length of database: 1,446,496
Effective search space: 59306336
Effective search space used: 59306336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.5 bits)