Query psy9147
Match_columns 236
No_of_seqs 242 out of 1483
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 20:10:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9147.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9147hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z8h_A Transcription regulator 100.0 2.5E-29 8.7E-34 196.6 14.1 127 4-130 10-137 (138)
2 2if5_A Zinc finger and BTB dom 100.0 3.1E-29 1.1E-33 191.1 14.2 118 6-123 1-120 (120)
3 3hve_A Gigaxonin; ubiquitin, c 100.0 8.9E-30 3E-34 218.0 11.5 174 4-177 5-207 (256)
4 1r29_A B-cell lymphoma 6 prote 100.0 6.7E-29 2.3E-33 191.2 14.4 124 2-125 1-126 (127)
5 3b84_A Zinc finger and BTB dom 100.0 1.7E-29 5.6E-34 192.8 10.8 116 8-125 2-117 (119)
6 1buo_A POZ domain, protein (pr 100.0 9.3E-29 3.2E-33 189.1 13.4 119 4-125 2-120 (121)
7 3ohu_A Transcription regulator 100.0 3.9E-29 1.3E-33 192.0 9.6 119 4-122 6-125 (125)
8 2ppi_A Gigaxonin; BTB domain, 100.0 1.6E-28 5.4E-33 193.7 12.5 119 4-122 21-143 (144)
9 3i3n_A Kelch-like protein 11; 100.0 4E-29 1.4E-33 216.6 9.9 175 4-178 6-216 (279)
10 3ga1_A Nucleus accumbens-assoc 100.0 7E-29 2.4E-33 191.8 10.0 121 3-125 6-127 (129)
11 2ihc_A Transcription regulator 100.0 4.9E-29 1.7E-33 191.5 8.9 120 4-123 3-123 (124)
12 2vpk_A Myoneurin; transcriptio 100.0 2.2E-28 7.6E-33 185.4 12.3 112 10-123 2-115 (116)
13 2yy9_A Zinc finger and BTB dom 100.0 2.1E-28 7.3E-33 190.8 11.5 117 9-127 4-120 (135)
14 2q81_A MIZ-1 protein; BTB/POZ 100.0 2E-28 6.8E-33 186.8 9.1 115 6-123 3-117 (119)
15 3fkc_A Transcriptional regulat 99.9 3.7E-27 1.3E-31 179.2 13.3 113 1-116 1-115 (116)
16 3htm_A Speckle-type POZ protei 99.9 3.6E-26 1.2E-30 183.8 11.5 130 6-135 10-141 (172)
17 3m5b_A Zinc finger and BTB dom 99.9 7.8E-26 2.7E-30 172.8 10.4 111 5-124 7-117 (119)
18 4eoz_A Speckle-type POZ protei 99.9 2.6E-26 8.9E-31 179.7 7.8 124 12-135 7-132 (145)
19 2vkp_A BTB/POZ domain-containi 99.9 1.5E-25 5.3E-30 167.5 11.3 101 24-125 2-108 (109)
20 3hqi_A Speckle-type POZ protei 99.9 1E-23 3.4E-28 185.1 12.7 121 14-134 158-280 (312)
21 2ast_A S-phase kinase-associat 99.5 6.4E-14 2.2E-18 111.8 12.3 97 33-130 3-130 (159)
22 4ajy_C Transcription elongatio 99.4 3.4E-12 1.2E-16 93.5 9.9 78 33-111 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.3 1.2E-11 4.2E-16 96.6 9.0 92 33-127 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 99.1 2.1E-11 7.3E-16 97.2 1.8 93 33-127 6-126 (160)
25 2fnj_C Transcription elongatio 98.6 8.3E-08 2.8E-12 69.9 7.7 78 33-111 3-96 (96)
26 3v7d_A Suppressor of kinetocho 98.6 2.2E-07 7.4E-12 74.5 10.8 94 32-126 8-133 (169)
27 1hv2_A Elongin C, ELC1; protei 98.6 2.7E-07 9.1E-12 67.6 10.1 78 33-111 6-99 (99)
28 3drz_A BTB/POZ domain-containi 98.6 3.7E-07 1.3E-11 67.7 10.6 91 32-123 7-105 (107)
29 1vcb_B Protein (elongin C); tu 98.2 6.5E-06 2.2E-10 61.5 8.4 79 32-111 18-112 (112)
30 3drx_A BTB/POZ domain-containi 97.7 5.3E-05 1.8E-09 62.0 5.9 93 32-125 13-113 (202)
31 1s1g_A Potassium voltage-gated 96.8 0.0017 5.8E-08 49.1 5.4 84 32-119 14-105 (124)
32 3kvt_A Potassium channel prote 96.7 0.0022 7.5E-08 47.8 4.9 83 32-115 6-93 (115)
33 1nn7_A Potassium channel KV4.2 96.4 0.0026 8.8E-08 46.6 3.5 83 33-119 2-92 (105)
34 2nz0_B Potassium voltage-gated 96.2 0.01 3.5E-07 45.7 6.3 83 32-118 36-126 (140)
35 1t1d_A Protein (potassium chan 95.9 0.009 3.1E-07 43.3 4.5 82 33-115 3-90 (100)
36 2eqx_A Kelch repeat and BTB do 94.9 0.01 3.5E-07 43.1 2.0 75 90-178 4-82 (105)
37 2r9r_B Paddle chimera voltage 86.3 0.96 3.3E-05 41.7 5.7 83 32-115 53-141 (514)
38 3htm_A Speckle-type POZ protei 59.2 7.6 0.00026 29.3 3.5 32 94-125 132-163 (172)
39 3hqi_A Speckle-type POZ protei 48.0 13 0.00046 31.1 3.5 32 94-125 272-303 (312)
40 3i3n_A Kelch-like protein 11; 31.2 36 0.0012 27.9 3.5 32 94-125 139-170 (279)
41 3hve_A Gigaxonin; ubiquitin, c 28.3 30 0.001 27.9 2.4 32 94-125 131-162 (256)
No 1
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.96 E-value=2.5e-29 Score=196.55 Aligned_cols=127 Identities=23% Similarity=0.403 Sum_probs=119.1
Q ss_pred cceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeC-CCCHHHHHH
Q psy9147 4 ELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILK-DINYEDIEA 82 (236)
Q Consensus 4 ~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~-~v~~~~f~~ 82 (236)
+.+.++++.|...+++.|+++|.++.+|||+|.|+|+.|+|||+|||++|+||++||.........|.++ ++++.+|+.
T Consensus 10 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~v~~~~~~~ 89 (138)
T 2z8h_A 10 AVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAELTVTLPEEVTVKGFEP 89 (138)
T ss_dssp CCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTTEEEECCTTSCHHHHHH
T ss_pred CeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCCceEEeCCCCCHHHHHH
Confidence 5688999999999999999999999999999999999999999999999999999998766556789995 899999999
Q ss_pred HHHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccCCcc
Q psy9147 83 VLCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQIQN 130 (236)
Q Consensus 83 ~L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~~~~ 130 (236)
+|+|+|||++.++.+++.+|+.+|++|+++.|++.|++++.......|
T Consensus 90 lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 90 LIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999999988876554
No 2
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.96 E-value=3.1e-29 Score=191.14 Aligned_cols=118 Identities=29% Similarity=0.508 Sum_probs=110.2
Q ss_pred eeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcC--CCCCCCeEEeCCCCHHHHHHH
Q psy9147 6 FCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRE--NPCQHPVVILKDINYEDIEAV 83 (236)
Q Consensus 6 ~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~--~~~~~~~i~l~~v~~~~f~~~ 83 (236)
+++.|++|.+.+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.+ .++....|.++++++.+|+.+
T Consensus 1 i~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~l 80 (120)
T 2if5_A 1 IGIPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTAL 80 (120)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHH
T ss_pred CCcCccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999965 456678999999999999999
Q ss_pred HHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhh
Q psy9147 84 LCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGD 123 (236)
Q Consensus 84 L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~ 123 (236)
|+|+|||++.++.+++.+++.+|++|+++.|++.|++++.
T Consensus 81 l~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 81 MDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHHHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999863
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=8.9e-30 Score=218.03 Aligned_cols=174 Identities=17% Similarity=0.224 Sum_probs=131.3
Q ss_pred cceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCC----CCCCCeEEeCCCCHHH
Q psy9147 4 ELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFREN----PCQHPVVILKDINYED 79 (236)
Q Consensus 4 ~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~----~~~~~~i~l~~v~~~~ 79 (236)
....+.++.|+..+++.|+.++.++.+|||+|.|+|+.|+|||.||+++|+||++||.+. ++....|.++++++.+
T Consensus 5 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~ 84 (256)
T 3hve_A 5 EGSAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMV 84 (256)
T ss_dssp -----CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHH
T ss_pred CCCccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHH
Confidence 346788999999999999999999999999999999999999999999999999999652 4567799999999999
Q ss_pred HHHHHHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccCCccchhcccchhhhchhcc-------------
Q psy9147 80 IEAVLCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQIQNEDSRSMDSSLVNQHDR------------- 146 (236)
Q Consensus 80 f~~~L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------- 146 (236)
|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+.++.......|+...+..+........
T Consensus 85 f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~ 164 (256)
T 3hve_A 85 MREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFR 164 (256)
T ss_dssp HHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888765432222111100
Q ss_pred --------ccccc----CCcCCCCCCCCcchhhhHhhhhcccc
Q psy9147 147 --------HSLSG----VGMDKDSIDPDEESNTYNNTTTYSST 177 (236)
Q Consensus 147 --------~~l~~----~~l~~d~l~~~~~~~~~~~v~~~~~~ 177 (236)
..+.. ..+..|++++.+|..+|.++.+|...
T Consensus 165 ~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~ 207 (256)
T 3hve_A 165 DVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAH 207 (256)
T ss_dssp HHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC
T ss_pred HHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHc
Confidence 00000 01678999999999999999999954
No 4
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.96 E-value=6.7e-29 Score=191.22 Aligned_cols=124 Identities=24% Similarity=0.393 Sum_probs=113.3
Q ss_pred CCcceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCC-CCCeEEe-CCCCHHH
Q psy9147 2 ANELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPC-QHPVVIL-KDINYED 79 (236)
Q Consensus 2 ~~~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~-~~~~i~l-~~v~~~~ 79 (236)
|.....+++++|...+++.|+.++.++.+|||+|.++|+.|+|||.||+++|+||++||..... ....|.| +++++.+
T Consensus 1 g~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~ 80 (127)
T 1r29_A 1 GSADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEG 80 (127)
T ss_dssp ----CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHH
T ss_pred CCCCccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHH
Confidence 3466789999999999999999999999999999999999999999999999999999976332 6679999 9999999
Q ss_pred HHHHHHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 80 IEAVLCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 80 f~~~L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++++..+
T Consensus 81 f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 81 FNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998754
No 5
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.96 E-value=1.7e-29 Score=192.83 Aligned_cols=116 Identities=21% Similarity=0.369 Sum_probs=108.5
Q ss_pred eecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHHHHH
Q psy9147 8 LKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKDINYEDIEAVLCFV 87 (236)
Q Consensus 8 ~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~v~~~~f~~~L~yl 87 (236)
+.|++|...+++.|++++.++.+|||+|.++|++|+|||.||+++|+||++||.... ...|.++++++.+|+.+|+|+
T Consensus 2 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~--~~~i~l~~~~~~~f~~ll~~i 79 (119)
T 3b84_A 2 MSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS--GGSVVLPAGFAEIFGLLLDFF 79 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT--CCCEEECGGGHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC--CCeEEeCCCCHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999997654 568999999999999999999
Q ss_pred hCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 88 YQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 88 Ytg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
|||++.++.+++.+++.+|++|+++.|++.|++++...
T Consensus 80 Ytg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 80 YTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999997654
No 6
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.96 E-value=9.3e-29 Score=189.09 Aligned_cols=119 Identities=23% Similarity=0.378 Sum_probs=112.4
Q ss_pred cceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHH
Q psy9147 4 ELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKDINYEDIEAV 83 (236)
Q Consensus 4 ~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~v~~~~f~~~ 83 (236)
+.+.+++++|.+.+++.|++++.++.+|||+|.++|+.|+|||.||+++|+||++||... ...|.++++++++|+.+
T Consensus 2 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~---~~~i~l~~~~~~~f~~l 78 (121)
T 1buo_A 2 GMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN---SQHYTLDFLSPKTFQQI 78 (121)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC---CSEEEECSSCHHHHHHH
T ss_pred CceeccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC---CcEEEeCCCCHHHHHHH
Confidence 347899999999999999999999999999999999999999999999999999999763 56899999999999999
Q ss_pred HHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 84 LCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 84 L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
|+|+|||++.++.+++.+++.+|++|+++.|++.|++++...
T Consensus 79 l~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 79 LEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998653
No 7
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.96 E-value=3.9e-29 Score=192.03 Aligned_cols=119 Identities=23% Similarity=0.417 Sum_probs=113.2
Q ss_pred cceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCC-CCHHHHHH
Q psy9147 4 ELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKD-INYEDIEA 82 (236)
Q Consensus 4 ~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~-v~~~~f~~ 82 (236)
....+.+++|...+++.|+++++++.+|||+|.|+|+.|+|||.|||++|+||++||.........|.+++ +++.+|+.
T Consensus 6 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~~~~~~f~~ 85 (125)
T 3ohu_A 6 PMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKNDLVVSLPEEVTARGFGP 85 (125)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCSSCEEECCTTCCHHHHHH
T ss_pred cceeeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCCCcEEEeCCCCCHHHHHH
Confidence 67789999999999999999999999999999999999999999999999999999987666678999998 99999999
Q ss_pred HHHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHh
Q psy9147 83 VLCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMG 122 (236)
Q Consensus 83 ~L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l 122 (236)
+|+|+|||++.++.+++.+++.+|++|+++.|++.|++|+
T Consensus 86 ~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 86 LLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9999999999999999999999999999999999998764
No 8
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.96 E-value=1.6e-28 Score=193.67 Aligned_cols=119 Identities=18% Similarity=0.329 Sum_probs=109.8
Q ss_pred cceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcC--C--CCCCCeEEeCCCCHHH
Q psy9147 4 ELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRE--N--PCQHPVVILKDINYED 79 (236)
Q Consensus 4 ~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~--~--~~~~~~i~l~~v~~~~ 79 (236)
+++.+++++|...+++.|+++|.++.+|||+|.|+|+.|+|||+|||++|+||++||.+ . ++....|.++++++.+
T Consensus 21 ~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~ 100 (144)
T 2ppi_A 21 QSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMV 100 (144)
T ss_dssp CCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHH
T ss_pred eeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHH
Confidence 67889999999999999999999999999999999999999999999999999999954 2 2567799999999999
Q ss_pred HHHHHHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHh
Q psy9147 80 IEAVLCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMG 122 (236)
Q Consensus 80 f~~~L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l 122 (236)
|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|++++
T Consensus 101 f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 101 MREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999886
No 9
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=4e-29 Score=216.62 Aligned_cols=175 Identities=16% Similarity=0.256 Sum_probs=144.5
Q ss_pred cceeeecCcchHHHHHHHHHHHhCCCCcceEEEeC---CEEEEeeHHHHhhcCHHHHHhhcC--CCCCCCeEEeC-----
Q psy9147 4 ELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCD---GRKITAHKVILSACSSYFRTIFRE--NPCQHPVVILK----- 73 (236)
Q Consensus 4 ~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~---~~~f~aHk~ILaa~S~yF~~~f~~--~~~~~~~i~l~----- 73 (236)
+...|.+++|+..+++.|+.+|.++.+|||+|.|+ |+.|+|||.|||++|+||++||.+ .++....|.++
T Consensus 6 ~~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~ 85 (279)
T 3i3n_A 6 EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSE 85 (279)
T ss_dssp CEEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSST
T ss_pred cccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEecccccc
Confidence 46789999999999999999999999999999998 999999999999999999999965 56777899998
Q ss_pred -CCCHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccCCccchhcccchhhhchhc-------
Q psy9147 74 -DINYEDIEAVLCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQIQNEDSRSMDSSLVNQHD------- 145 (236)
Q Consensus 74 -~v~~~~f~~~L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~~~~~~~~~~~~~~~~~~~------- 145 (236)
++++.+|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|..++.......|+...+..+.......
T Consensus 86 ~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~ 165 (279)
T 3i3n_A 86 PGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAAD 165 (279)
T ss_dssp TCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999888876543322211110
Q ss_pred -----------ccccccC-------CcCCCCCCCCcchhhhHhhhhccccC
Q psy9147 146 -----------RHSLSGV-------GMDKDSIDPDEESNTYNNTTTYSSTG 178 (236)
Q Consensus 146 -----------~~~l~~~-------~l~~d~l~~~~~~~~~~~v~~~~~~~ 178 (236)
....... .+..|++++.+|..+|.++.+|....
T Consensus 166 ~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~ 216 (279)
T 3i3n_A 166 MIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN 216 (279)
T ss_dssp HHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC
Confidence 0011111 16889999999999999999999553
No 10
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.96 E-value=7e-29 Score=191.83 Aligned_cols=121 Identities=26% Similarity=0.439 Sum_probs=108.0
Q ss_pred CcceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeC-CCCHHHHH
Q psy9147 3 NELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILK-DINYEDIE 81 (236)
Q Consensus 3 ~~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~-~v~~~~f~ 81 (236)
.+.+++.|++|...+++.|+.++.++.+|||+|.|+|+.|+|||.||+++|+||++||... ....|.++ ++++.+|+
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~--~~~~i~l~~~~~~~~f~ 83 (129)
T 3ga1_A 6 AQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS--RSAVVELPAAVQPQSFQ 83 (129)
T ss_dssp -CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC--CCSEEECCTTCCHHHHH
T ss_pred CceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC--CCCEEEECCCCCHHHHH
Confidence 3788999999999999999999999999999999999999999999999999999999765 56789997 89999999
Q ss_pred HHHHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 82 AVLCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 82 ~~L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++|+.+.
T Consensus 84 ~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 84 QILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998754
No 11
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.96 E-value=4.9e-29 Score=191.51 Aligned_cols=120 Identities=24% Similarity=0.442 Sum_probs=110.9
Q ss_pred cceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeC-CCCHHHHHH
Q psy9147 4 ELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILK-DINYEDIEA 82 (236)
Q Consensus 4 ~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~-~v~~~~f~~ 82 (236)
+.+.++++.|...+++.|++++.++.+|||+|.++|+.|+|||.|||++|+||++||.+.......|.++ ++++.+|+.
T Consensus 3 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~i~l~~~v~~~~f~~ 82 (124)
T 2ihc_A 3 SVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGELNITLPEEVTVKGFEP 82 (124)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---CEEEECCTTSCHHHHHH
T ss_pred ceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCCceEeecCCcCHHHHHH
Confidence 5688999999999999999999999999999999999999999999999999999998765556788994 899999999
Q ss_pred HHHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhh
Q psy9147 83 VLCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGD 123 (236)
Q Consensus 83 ~L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~ 123 (236)
+|+|+|||++.++.+++.+++.+|++|+++.|++.|++++.
T Consensus 83 lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 83 LIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998864
No 12
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.2e-28 Score=185.44 Aligned_cols=112 Identities=21% Similarity=0.424 Sum_probs=106.1
Q ss_pred cCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeC--CCCHHHHHHHHHHH
Q psy9147 10 WNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILK--DINYEDIEAVLCFV 87 (236)
Q Consensus 10 ~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~--~v~~~~f~~~L~yl 87 (236)
+++|...+++.|+.++.++.+|||+|.++|+.|+|||.||+++|+||++||... ....|.|+ ++++.+|+.+|+|+
T Consensus 2 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~--~~~~i~l~~~~~~~~~f~~ll~~~ 79 (116)
T 2vpk_A 2 MSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST--SENNVFLDQSQVKADGFQKLLEFI 79 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC--CCSCEECCTTTCCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC--CCCeEEeecCCCCHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999765 35678888 99999999999999
Q ss_pred hCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhh
Q psy9147 88 YQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGD 123 (236)
Q Consensus 88 Ytg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~ 123 (236)
|||++.++.+++.+++.+|++|+++.|++.|++++.
T Consensus 80 Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 80 YTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999875
No 13
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.95 E-value=2.1e-28 Score=190.77 Aligned_cols=117 Identities=22% Similarity=0.345 Sum_probs=103.9
Q ss_pred ecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHHHHHh
Q psy9147 9 KWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKDINYEDIEAVLCFVY 88 (236)
Q Consensus 9 ~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~v~~~~f~~~L~ylY 88 (236)
.+++|...+++.|+++|+++.+|||+|.|+|+.|+|||.||+++|+||++||.... ...|.|+++++.+|+.+|+|||
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~--~~~i~l~~~~~~~f~~lL~fiY 81 (135)
T 2yy9_A 4 GSSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT--GGSVVLPAGFAEIFGLLLDFFY 81 (135)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC------CCEEECGGGHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC--CCeEEeCCCCHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999997644 5679999999999999999999
Q ss_pred CCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccC
Q psy9147 89 QGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQ 127 (236)
Q Consensus 89 tg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~ 127 (236)
||++.++.+++.+|+.+|++|+|+.|++.|++++.....
T Consensus 82 tg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 82 TGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSV 120 (135)
T ss_dssp HSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC----
T ss_pred CCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999877654
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.95 E-value=2e-28 Score=186.84 Aligned_cols=115 Identities=30% Similarity=0.492 Sum_probs=107.3
Q ss_pred eeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHHH
Q psy9147 6 FCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKDINYEDIEAVLC 85 (236)
Q Consensus 6 ~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~v~~~~f~~~L~ 85 (236)
+.+.++.|...+++.|+++|+++.+|||+|.++|+.|+|||.||+++|+||++||.. ....|.++++++.+|+.+|+
T Consensus 3 ~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~---~~~~i~l~~~~~~~f~~ll~ 79 (119)
T 2q81_A 3 LGSDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD---QKDVVHLDISNAAGLGQVLE 79 (119)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH---CCSGGGGGGCCHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC---CCCEEEeCCCCHHHHHHHHH
Confidence 467789999999999999999999999999999999999999999999999999975 24568889999999999999
Q ss_pred HHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhh
Q psy9147 86 FVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGD 123 (236)
Q Consensus 86 ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~ 123 (236)
|+|||++.++.+++.+++.+|++|+++.|++.|++++.
T Consensus 80 ~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 80 FMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999874
No 15
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.95 E-value=3.7e-27 Score=179.24 Aligned_cols=113 Identities=30% Similarity=0.493 Sum_probs=105.3
Q ss_pred CCC-cceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCCCCHHH
Q psy9147 1 MAN-ELFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKDINYED 79 (236)
Q Consensus 1 m~~-~~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~v~~~~ 79 (236)
|+. +.+.+.+++|...+++.|++++.++.+|||+|.++|+.|+|||.|||++|+||++||... ...|.++++++.+
T Consensus 1 m~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~---~~~i~l~~~~~~~ 77 (116)
T 3fkc_A 1 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA---GQVVELSFIRAEI 77 (116)
T ss_dssp ---CCCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC---CSEEEECSSCHHH
T ss_pred CCcCceeeecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC---CCEEEeCCCCHHH
Confidence 444 889999999999999999999999999999999999999999999999999999999764 5689999999999
Q ss_pred HHHHHHHHhCCcc-ccCHHHHHHHHHHHHHhCChhHHH
Q psy9147 80 IEAVLCFVYQGTV-YISKSRMDSFLKTAESLQIKGLAG 116 (236)
Q Consensus 80 f~~~L~ylYtg~i-~i~~~~v~~ll~~A~~l~i~~L~~ 116 (236)
|+.+|+|+|||++ .++.+++.+++.+|++|+|+.|++
T Consensus 78 f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 78 FAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 9999999999999 699999999999999999999875
No 16
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.93 E-value=3.6e-26 Score=183.80 Aligned_cols=130 Identities=20% Similarity=0.294 Sum_probs=118.1
Q ss_pred eeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcC--CCCCCCeEEeCCCCHHHHHHH
Q psy9147 6 FCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRE--NPCQHPVVILKDINYEDIEAV 83 (236)
Q Consensus 6 ~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~--~~~~~~~i~l~~v~~~~f~~~ 83 (236)
-.-.+..+.+.+++.|+.+++++.+|||+|.|+|+.|+|||.||+++|+||++||.. .+.....|.++++++.+|+.+
T Consensus 10 ~~~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~ 89 (172)
T 3htm_A 10 TMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEM 89 (172)
T ss_dssp --CCSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHH
Confidence 334456677789999999999999999999999999999999999999999999965 566678999999999999999
Q ss_pred HHHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccCCccchhcc
Q psy9147 84 LCFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQIQNEDSRS 135 (236)
Q Consensus 84 L~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~~~~~~~~~ 135 (236)
|+|+|||++.++.+++.+++.+|++|+++.|++.|++++.......|+...+
T Consensus 90 l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~ 141 (172)
T 3htm_A 90 MCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEIL 141 (172)
T ss_dssp HHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHH
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999988888877543
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.93 E-value=7.8e-26 Score=172.84 Aligned_cols=111 Identities=17% Similarity=0.224 Sum_probs=100.6
Q ss_pred ceeeecCcchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHH
Q psy9147 5 LFCLKWNNYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKDINYEDIEAVL 84 (236)
Q Consensus 5 ~~~~~~~~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~v~~~~f~~~L 84 (236)
......+.|...+++.|+ |.++.+|||+|.|+|+.|+|||+|||++|+||++ ...+|.++++++.+|+.+|
T Consensus 7 p~~~~~~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~-------~~~~i~l~~v~~~~f~~ll 77 (119)
T 3m5b_A 7 PIRLPSPYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR-------RGQWALGEGISPSTFAQLL 77 (119)
T ss_dssp CEEECCTTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC-------CEEEECCSSCCHHHHHHHH
T ss_pred CCCCCCCcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc-------CCCEEEeCCCCHHHHHHHH
Confidence 345667788899999887 7789999999999999999999999999999984 3568999999999999999
Q ss_pred HHHhCCccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhc
Q psy9147 85 CFVYQGTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDN 124 (236)
Q Consensus 85 ~ylYtg~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~ 124 (236)
+|+|||++.++.+++.+++.+|++|+|+.|++.|++++..
T Consensus 78 ~fiYtg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 78 NFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHTTCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999998654
No 18
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.93 E-value=2.6e-26 Score=179.73 Aligned_cols=124 Identities=21% Similarity=0.333 Sum_probs=102.7
Q ss_pred cchHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcC--CCCCCCeEEeCCCCHHHHHHHHHHHhC
Q psy9147 12 NYTSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRE--NPCQHPVVILKDINYEDIEAVLCFVYQ 89 (236)
Q Consensus 12 ~h~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~--~~~~~~~i~l~~v~~~~f~~~L~ylYt 89 (236)
-+.+.+++.++.+++++.+|||+|.++|+.|+|||.||+++|+||++||.. .++....|.++++++.+|+.+|+|+||
T Consensus 7 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~ 86 (145)
T 4eoz_A 7 VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYT 86 (145)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhcc
Confidence 345678999999999999999999999999999999999999999999976 344457899999999999999999999
Q ss_pred CccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccCCccchhcc
Q psy9147 90 GTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQIQNEDSRS 135 (236)
Q Consensus 90 g~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~~~~~~~~~ 135 (236)
|.+.++.+++.+++.+|++|+++.|++.|++++.......|+...+
T Consensus 87 ~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l 132 (145)
T 4eoz_A 87 GKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEIL 132 (145)
T ss_dssp SCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC--------------
T ss_pred CccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999999999999999999999999988888877443
No 19
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.93 E-value=1.5e-25 Score=167.55 Aligned_cols=101 Identities=19% Similarity=0.279 Sum_probs=92.3
Q ss_pred HHhCCCCcceEEEeCC----EEEEeeHHHHhhcCHHHHHhhcC--CCCCCCeEEeCCCCHHHHHHHHHHHhCCccccCHH
Q psy9147 24 LRTDGDLVDVTILCDG----RKITAHKVILSACSSYFRTIFRE--NPCQHPVVILKDINYEDIEAVLCFVYQGTVYISKS 97 (236)
Q Consensus 24 ~~~~~~~sDv~i~v~~----~~f~aHk~ILaa~S~yF~~~f~~--~~~~~~~i~l~~v~~~~f~~~L~ylYtg~i~i~~~ 97 (236)
+++++.+|||+|.+++ +.|+|||.||+++|+||++||.+ .++. ..|.++++++.+|+.+|+|+|||++.++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~ 80 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEAD 80 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHH
Confidence 5789999999999988 89999999999999999999975 4444 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 98 RMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 98 ~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
++.+++.+|++|+++.|++.|++++..+
T Consensus 81 ~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 81 TVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 9999999999999999999999998754
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.90 E-value=1e-23 Score=185.14 Aligned_cols=121 Identities=21% Similarity=0.361 Sum_probs=111.1
Q ss_pred hHHHHHHHHHHHhCCCCcceEEEeCCEEEEeeHHHHhhcCHHHHHhhcC--CCCCCCeEEeCCCCHHHHHHHHHHHhCCc
Q psy9147 14 TSNIITELDSLRTDGDLVDVTILCDGRKITAHKVILSACSSYFRTIFRE--NPCQHPVVILKDINYEDIEAVLCFVYQGT 91 (236)
Q Consensus 14 ~~~ll~~l~~~~~~~~~sDv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~--~~~~~~~i~l~~v~~~~f~~~L~ylYtg~ 91 (236)
.+.|.+.|..++.++.+|||+|.|+|++|+|||.|||++||||++||.+ .++....|.|+++++.+|+.+|+|+|||+
T Consensus 158 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~ 237 (312)
T 3hqi_A 158 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGK 237 (312)
T ss_dssp CCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred CchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCC
Confidence 4568899999999999999999999999999999999999999999965 67777899999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccCCccchhc
Q psy9147 92 VYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQIQNEDSR 134 (236)
Q Consensus 92 i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~~~~~~~~ 134 (236)
++++.+++.+|+.+|++|+++.|++.|+++|.......|+...
T Consensus 238 ~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~ 280 (312)
T 3hqi_A 238 APNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 280 (312)
T ss_dssp CTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHH
T ss_pred CCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHH
Confidence 9999999999999999999999999999999998888887644
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.54 E-value=6.4e-14 Score=111.77 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=82.3
Q ss_pred eEEEe-CCEEEEeeHHHHhhcCHHHHHhhcC---C-CCCCCeEEeCCCCHHHHHHHHHHHhCCc----------------
Q psy9147 33 VTILC-DGRKITAHKVILSACSSYFRTIFRE---N-PCQHPVVILKDINYEDIEAVLCFVYQGT---------------- 91 (236)
Q Consensus 33 v~i~v-~~~~f~aHk~ILaa~S~yF~~~f~~---~-~~~~~~i~l~~v~~~~f~~~L~ylYtg~---------------- 91 (236)
|++.. +|+.|.+|+.+ |++|+||+.||.. . +.....|.|++|++.+++.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 66765 89999999999 9999999999965 2 4555789999999999999999999987
Q ss_pred ----------cccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccCCcc
Q psy9147 92 ----------VYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQIQN 130 (236)
Q Consensus 92 ----------i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~~~~ 130 (236)
+.++.+++.+|+.+|++|+|..|.++|+.++...+.-.+
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt 130 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 130 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCC
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 778999999999999999999999999999876654433
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.37 E-value=3.4e-12 Score=93.53 Aligned_cols=78 Identities=14% Similarity=0.197 Sum_probs=66.0
Q ss_pred eEEEe-CCEEEEeeHHHHhhcCHHHHHhhcC----CCCCCCeEEeCCCCHHHHHHHHHHHh-----C---Cccc---cCH
Q psy9147 33 VTILC-DGRKITAHKVILSACSSYFRTIFRE----NPCQHPVVILKDINYEDIEAVLCFVY-----Q---GTVY---ISK 96 (236)
Q Consensus 33 v~i~v-~~~~f~aHk~ILaa~S~yF~~~f~~----~~~~~~~i~l~~v~~~~f~~~L~ylY-----t---g~i~---i~~ 96 (236)
|+++. +|+.|.+||.+ |++|+||++||.. .+.....|.|++|++.+++.+++|+| + ++++ ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 45555 78999999999 9999999999964 34457789999999999999999999 5 7888 999
Q ss_pred HHHHHHHHHHHHhCC
Q psy9147 97 SRMDSFLKTAESLQI 111 (236)
Q Consensus 97 ~~v~~ll~~A~~l~i 111 (236)
+++.+|+.+|++|+.
T Consensus 83 ~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 83 EIALELLMAANFLDC 97 (97)
T ss_dssp GGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhhCC
Confidence 999999999999974
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.28 E-value=1.2e-11 Score=96.60 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=80.8
Q ss_pred eEEEe-CCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHHHHHhCCc--------------------
Q psy9147 33 VTILC-DGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKDINYEDIEAVLCFVYQGT-------------------- 91 (236)
Q Consensus 33 v~i~v-~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~v~~~~f~~~L~ylYtg~-------------------- 91 (236)
|++.. +|+.|.+|+.+ |.+|++|+.||.... ...|.+++|+..+++.+++|+|...
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~ 80 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG--MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIP 80 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC--CSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC--CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhh
Confidence 66666 88999999998 899999999996532 5589999999999999999999755
Q ss_pred ------cccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccC
Q psy9147 92 ------VYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQ 127 (236)
Q Consensus 92 ------i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~ 127 (236)
+.++.+++.+|+.||++|+|..|.++|++++...+.
T Consensus 81 ~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 81 VWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 668889999999999999999999999999876654
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.09 E-value=2.1e-11 Score=97.23 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=51.8
Q ss_pred eEEEe-CCEEEEeeHHHHhhcCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHHHHHhCCc--------------------
Q psy9147 33 VTILC-DGRKITAHKVILSACSSYFRTIFRENPCQHPVVILKDINYEDIEAVLCFVYQGT-------------------- 91 (236)
Q Consensus 33 v~i~v-~~~~f~aHk~ILaa~S~yF~~~f~~~~~~~~~i~l~~v~~~~f~~~L~ylYtg~-------------------- 91 (236)
|+|.. +|+.|.+|+.+ |.+|++|+.||.... ....|.|++|+..+++.+++|+|...
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i 83 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC-VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDL 83 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC-------------CCTTSCHHHHHHHHHC-------------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC-CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccchh
Confidence 56665 79999999998 899999999996532 34479999999999999999999875
Q ss_pred -------cccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccC
Q psy9147 92 -------VYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQ 127 (236)
Q Consensus 92 -------i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~ 127 (236)
+.++.+++.+|+.||++|+|..|.++|++++...+.
T Consensus 84 ~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 84 KAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIK 126 (160)
T ss_dssp -----------------CHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 357788899999999999999999999999877654
No 25
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.65 E-value=8.3e-08 Score=69.89 Aligned_cols=78 Identities=14% Similarity=0.177 Sum_probs=63.4
Q ss_pred eEEEe-CCEEEEeeHHHHhhcCHHHHHhhcC----CCCCCCeEEeCCCCHHHHHHHHHHHhCCc-----------cccCH
Q psy9147 33 VTILC-DGRKITAHKVILSACSSYFRTIFRE----NPCQHPVVILKDINYEDIEAVLCFVYQGT-----------VYISK 96 (236)
Q Consensus 33 v~i~v-~~~~f~aHk~ILaa~S~yF~~~f~~----~~~~~~~i~l~~v~~~~f~~~L~ylYtg~-----------i~i~~ 96 (236)
|++.. +|+.|.+++.+ |..|.+++.|+.. .+.....|.|++|+..+++.+++|+|.-. ..++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 55655 89999999997 8999999999964 24445689999999999999999997632 34778
Q ss_pred HHHHHHHHHHHHhCC
Q psy9147 97 SRMDSFLKTAESLQI 111 (236)
Q Consensus 97 ~~v~~ll~~A~~l~i 111 (236)
+.+.+|+.||++|+|
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999999986
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.64 E-value=2.2e-07 Score=74.54 Aligned_cols=94 Identities=15% Similarity=0.215 Sum_probs=75.3
Q ss_pred ceEEEe-CCEEEEeeHHHHhhcCHHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHHHHHhCCc-------------
Q psy9147 32 DVTILC-DGRKITAHKVILSACSSYFRTIFRENP------CQHPVVILKDINYEDIEAVLCFVYQGT------------- 91 (236)
Q Consensus 32 Dv~i~v-~~~~f~aHk~ILaa~S~yF~~~f~~~~------~~~~~i~l~~v~~~~f~~~L~ylYtg~------------- 91 (236)
-|+|+. +|+.|.+++.+ |..|.+++.|+.... .....|.|++|+..+++.|++|+|.-.
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 466655 78999999998 888999999996421 223689999999999999999996422
Q ss_pred ------------cccCHHHHHHHHHHHHHhCChhHHHHHHHHhhccc
Q psy9147 92 ------------VYISKSRMDSFLKTAESLQIKGLAGASNMMGDNES 126 (236)
Q Consensus 92 ------------i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~ 126 (236)
+.++.+.+.+|+.||++|+|..|.++|+..+...+
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMI 133 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 23667889999999999999999999988865543
No 27
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.63 E-value=2.7e-07 Score=67.56 Aligned_cols=78 Identities=15% Similarity=0.183 Sum_probs=65.9
Q ss_pred eEEEe-CCEEEEeeHHHHhhcCHHHHHhhcC-CCCCCCeEEeCCCCHHHHHHHHHHHhCCc--------------cccCH
Q psy9147 33 VTILC-DGRKITAHKVILSACSSYFRTIFRE-NPCQHPVVILKDINYEDIEAVLCFVYQGT--------------VYISK 96 (236)
Q Consensus 33 v~i~v-~~~~f~aHk~ILaa~S~yF~~~f~~-~~~~~~~i~l~~v~~~~f~~~L~ylYtg~--------------i~i~~ 96 (236)
|++.. +|+.|.+++.+ |..|.+++.||.. .+.....|.|++|+..+++.+++|+|.-. ..++.
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~ 84 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPT 84 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCCH
Confidence 66666 89999999997 8999999999964 23344689999999999999999998632 24788
Q ss_pred HHHHHHHHHHHHhCC
Q psy9147 97 SRMDSFLKTAESLQI 111 (236)
Q Consensus 97 ~~v~~ll~~A~~l~i 111 (236)
+.+.+|+.||++|+|
T Consensus 85 ~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 85 EMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999999986
No 28
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.61 E-value=3.7e-07 Score=67.69 Aligned_cols=91 Identities=16% Similarity=0.184 Sum_probs=74.6
Q ss_pred ceEEEeCCEEEEeeHHHHhhcC-HHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHHHHHhCCccccCHH-HHHHHH
Q psy9147 32 DVTILCDGRKITAHKVILSACS-SYFRTIFREN------PCQHPVVILKDINYEDIEAVLCFVYQGTVYISKS-RMDSFL 103 (236)
Q Consensus 32 Dv~i~v~~~~f~aHk~ILaa~S-~yF~~~f~~~------~~~~~~i~l~~v~~~~f~~~L~ylYtg~i~i~~~-~v~~ll 103 (236)
-|+|-|+|+.|...+..|+... .+|.+||... .....++.+ +-+|..|+.+|+|+.+|.+.++.+ ....++
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~ 85 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 85 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHH
Confidence 4788999999999999999886 4788888642 123456666 579999999999999999987643 356799
Q ss_pred HHHHHhCChhHHHHHHHHhh
Q psy9147 104 KTAESLQIKGLAGASNMMGD 123 (236)
Q Consensus 104 ~~A~~l~i~~L~~~c~~~l~ 123 (236)
.-|.+|+|..|++.|.+.+.
T Consensus 86 ~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 86 EEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp HHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHh
Confidence 99999999999999987654
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.19 E-value=6.5e-06 Score=61.48 Aligned_cols=79 Identities=14% Similarity=0.164 Sum_probs=63.3
Q ss_pred ceEEEe-CCEEEEeeHHHHhhcCHHHHHhhcC----CCCCCCeEEeCCCCHHHHHHHHHHHhCCc-----------cccC
Q psy9147 32 DVTILC-DGRKITAHKVILSACSSYFRTIFRE----NPCQHPVVILKDINYEDIEAVLCFVYQGT-----------VYIS 95 (236)
Q Consensus 32 Dv~i~v-~~~~f~aHk~ILaa~S~yF~~~f~~----~~~~~~~i~l~~v~~~~f~~~L~ylYtg~-----------i~i~ 95 (236)
-|++.. +|..|.+++. .|..|..++.|+.. .+.....|.|++|+..+++.+++|+|.-. ..++
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 466664 8999999999 57899999999964 23334689999999999999999997532 3578
Q ss_pred HHHHHHHHHHHHHhCC
Q psy9147 96 KSRMDSFLKTAESLQI 111 (236)
Q Consensus 96 ~~~v~~ll~~A~~l~i 111 (236)
.+.+.+|+.||++|+|
T Consensus 97 ~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 PEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 8999999999999986
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.69 E-value=5.3e-05 Score=62.03 Aligned_cols=93 Identities=17% Similarity=0.214 Sum_probs=74.4
Q ss_pred ceEEEeCCEEEEeeHHHHhhcC-HHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHHHHHhCCccccCHH-HHHHHH
Q psy9147 32 DVTILCDGRKITAHKVILSACS-SYFRTIFRENP------CQHPVVILKDINYEDIEAVLCFVYQGTVYISKS-RMDSFL 103 (236)
Q Consensus 32 Dv~i~v~~~~f~aHk~ILaa~S-~yF~~~f~~~~------~~~~~i~l~~v~~~~f~~~L~ylYtg~i~i~~~-~v~~ll 103 (236)
=|+|-|+|..|...+..|.... .+|..||.... ....++.+ +-+|..|+.+|+|+-+|.+.++.+ ....++
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~ 91 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 91 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHHH
Confidence 3778899999999999999875 37788886431 13446666 468999999999999999987644 346699
Q ss_pred HHHHHhCChhHHHHHHHHhhcc
Q psy9147 104 KTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 104 ~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
.-|.+|+|..|++.|...+...
T Consensus 92 eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 92 EEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCcHHHHHHHHHHHHHH
Confidence 9999999999999998887544
No 31
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.82 E-value=0.0017 Score=49.06 Aligned_cols=84 Identities=13% Similarity=0.158 Sum_probs=63.5
Q ss_pred ceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHHHHHhCCccccCHH-HHHHHHH
Q psy9147 32 DVTILCDGRKITAHKVILSACSSYFRTIFREN------PCQHPVVILKDINYEDIEAVLCFVYQGTVYISKS-RMDSFLK 104 (236)
Q Consensus 32 Dv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~------~~~~~~i~l~~v~~~~f~~~L~ylYtg~i~i~~~-~v~~ll~ 104 (236)
=|+|-|||..|..-+..|..... .+|+.. .....++.++ =++..|+.+|+|+-+|.+.++.+ .+..++.
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~FiD-Rdp~~F~~ILnflR~G~l~~p~~~~~~~l~~ 89 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFFD-RDPEVFRCVLNFYRTGKLHYPRYECISAYDD 89 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEEC-SCHHHHHHHHHHHHHSCBCCCTTSCHHHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEEc-CChHHHHHHHHHHhcCCCCCCCCcCHHHHHH
Confidence 47888999999999999987642 233221 1234466664 49999999999999999987644 4778999
Q ss_pred HHHHhCChhHH-HHHH
Q psy9147 105 TAESLQIKGLA-GASN 119 (236)
Q Consensus 105 ~A~~l~i~~L~-~~c~ 119 (236)
-|++|+|..+. +.|+
T Consensus 90 Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 90 ELAFYGILPEIIGDCC 105 (124)
T ss_dssp HHHHTTCCGGGBCHHH
T ss_pred HHHHcCCChHHHHHHH
Confidence 99999999874 5543
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.66 E-value=0.0022 Score=47.81 Aligned_cols=83 Identities=10% Similarity=0.015 Sum_probs=63.7
Q ss_pred ceEEEeCCEEEEeeHHHHhhcCH-HHHHhhcCCC---CCCCeEEeCCCCHHHHHHHHHHHhCCccccCHH-HHHHHHHHH
Q psy9147 32 DVTILCDGRKITAHKVILSACSS-YFRTIFRENP---CQHPVVILKDINYEDIEAVLCFVYQGTVYISKS-RMDSFLKTA 106 (236)
Q Consensus 32 Dv~i~v~~~~f~aHk~ILaa~S~-yF~~~f~~~~---~~~~~i~l~~v~~~~f~~~L~ylYtg~i~i~~~-~v~~ll~~A 106 (236)
=|+|-|||..|...+..|..... .+.+||.... ....++-++ -+|..|+.+|+|+-+|++.++.+ .+..++.-|
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD-Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea 84 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD-RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEEL 84 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC-SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe-cChHHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Confidence 37889999999999999998743 3455554321 234567664 68999999999999999987643 467799999
Q ss_pred HHhCChhHH
Q psy9147 107 ESLQIKGLA 115 (236)
Q Consensus 107 ~~l~i~~L~ 115 (236)
.+|+|....
T Consensus 85 ~fy~i~~~~ 93 (115)
T 3kvt_A 85 EFWGLDSNQ 93 (115)
T ss_dssp HHHTCCGGG
T ss_pred HHhCCChHH
Confidence 999998853
No 33
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=96.35 E-value=0.0026 Score=46.60 Aligned_cols=83 Identities=8% Similarity=0.149 Sum_probs=62.2
Q ss_pred eEEEeCCEEEEeeHHHHhhcCHHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHHHHHhCCccccCHH-HHHHHHHH
Q psy9147 33 VTILCDGRKITAHKVILSACSSYFRTIFRENP------CQHPVVILKDINYEDIEAVLCFVYQGTVYISKS-RMDSFLKT 105 (236)
Q Consensus 33 v~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~~------~~~~~i~l~~v~~~~f~~~L~ylYtg~i~i~~~-~v~~ll~~ 105 (236)
|+|-|+|..|...+..|..... .||+..+ ....++-++ =++..|+.+|+|+-+|.+.++.+ .+..++.-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiD-Rdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFD-RDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEEC-SCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEe-CCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 7889999999999999987642 2332211 123466664 48999999999999999987643 46779999
Q ss_pred HHHhCChhHH-HHHH
Q psy9147 106 AESLQIKGLA-GASN 119 (236)
Q Consensus 106 A~~l~i~~L~-~~c~ 119 (236)
|++|+|..+. +.|+
T Consensus 78 a~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 78 LAFFGLIPEIIGDCC 92 (105)
T ss_dssp HHHHTCCSCCBCHHH
T ss_pred HHHcCCCHHHHHHHH
Confidence 9999999873 4444
No 34
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=96.18 E-value=0.01 Score=45.68 Aligned_cols=83 Identities=13% Similarity=0.167 Sum_probs=62.8
Q ss_pred ceEEEeCCEEEEeeHHHHhhcCHHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHHHHHhCCccccCHH-HHHHHHH
Q psy9147 32 DVTILCDGRKITAHKVILSACSSYFRTIFREN------PCQHPVVILKDINYEDIEAVLCFVYQGTVYISKS-RMDSFLK 104 (236)
Q Consensus 32 Dv~i~v~~~~f~aHk~ILaa~S~yF~~~f~~~------~~~~~~i~l~~v~~~~f~~~L~ylYtg~i~i~~~-~v~~ll~ 104 (236)
=|+|-|+|..|...+..|..... .||+.. .....++.++ =++..|+.+|+|+-+|.+.+..+ .+..++.
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFiD-Rdp~~F~~ILnflR~G~l~~p~~~~~~~l~e 111 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFFD-RDPEVFRCVLNFYRTGKLHYPRYECISAYDD 111 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEEC-SCHHHHHHHHHHHHHSSBCCCTTSCHHHHHH
T ss_pred EEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEEe-CCcHHHHHHHHHHhcCCcCCCCCcCHHHHHH
Confidence 47888999999999999987642 233221 1234566664 49999999999999999987643 4777999
Q ss_pred HHHHhCChhH-HHHH
Q psy9147 105 TAESLQIKGL-AGAS 118 (236)
Q Consensus 105 ~A~~l~i~~L-~~~c 118 (236)
-|++|+|..+ ++.|
T Consensus 112 Ea~fy~i~~l~l~~C 126 (140)
T 2nz0_B 112 ELAFYGILPEIIGDC 126 (140)
T ss_dssp HHHHHTCCGGGBCTT
T ss_pred HHHHcCCChHHHHHH
Confidence 9999999987 3444
No 35
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.90 E-value=0.009 Score=43.32 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=60.9
Q ss_pred eEEEeCCEEEEeeHHHHhhcCH-HHHHhhcC---CCCCCCeEEeCCCCHHHHHHHHHHHhC-CccccCHH-HHHHHHHHH
Q psy9147 33 VTILCDGRKITAHKVILSACSS-YFRTIFRE---NPCQHPVVILKDINYEDIEAVLCFVYQ-GTVYISKS-RMDSFLKTA 106 (236)
Q Consensus 33 v~i~v~~~~f~aHk~ILaa~S~-yF~~~f~~---~~~~~~~i~l~~v~~~~f~~~L~ylYt-g~i~i~~~-~v~~ll~~A 106 (236)
|+|-|+|..|...+..|+.... .+.+|+.. ......++-+ +=++..|+.+|+|+-+ |++.++.. .+..++.-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 6789999999999999976632 22333321 1123456776 4589999999999998 89877543 467799999
Q ss_pred HHhCChhHH
Q psy9147 107 ESLQIKGLA 115 (236)
Q Consensus 107 ~~l~i~~L~ 115 (236)
++|+|..+.
T Consensus 82 ~fy~i~~~~ 90 (100)
T 1t1d_A 82 KFYELGENA 90 (100)
T ss_dssp HHTTCCHHH
T ss_pred HHcCCCHHH
Confidence 999998864
No 36
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.94 E-value=0.01 Score=43.11 Aligned_cols=75 Identities=11% Similarity=0.013 Sum_probs=50.1
Q ss_pred CccccCHHHHHHHHHHHHHhCChhHHHHHHHHhhcccCCccchhcccchhhhchhcccccccC----CcCCCCCCCCcch
Q psy9147 90 GTVYISKSRMDSFLKTAESLQIKGLAGASNMMGDNESQIQNEDSRSMDSSLVNQHDRHSLSGV----GMDKDSIDPDEES 165 (236)
Q Consensus 90 g~i~i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~l~~d~l~~~~~~ 165 (236)
+.-.++.+|...++.+|+.|+++.|.+.|..|+..+-. .+........+... .+..| +.+|.
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~-----------~v~~~~eFl~L~~~~L~~lL~sd---v~~E~ 69 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLA-----------QLQNTEEFLHLPHRLLTDIISDG---VPCSQ 69 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCH-----------HHHTSHHHHHSCHHHHHHHHHTC---EETTS
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----------HHHhcccHhhCCHHHHHHHHcCC---CCCHH
Confidence 34457889999999999999999999999999765421 11110010111111 13333 78899
Q ss_pred hhhHhhhhccccC
Q psy9147 166 NTYNNTTTYSSTG 178 (236)
Q Consensus 166 ~~~~~v~~~~~~~ 178 (236)
.+|.++.+|....
T Consensus 70 ~vf~av~~Wv~~d 82 (105)
T 2eqx_A 70 NPTEAIEAWINFN 82 (105)
T ss_dssp CHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 9999999998543
No 37
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=86.25 E-value=0.96 Score=41.75 Aligned_cols=83 Identities=14% Similarity=0.126 Sum_probs=59.8
Q ss_pred ceEEEeCCEEEEeeHHHHhhcCHHH-HHhhc---CCCCCCCeEEeCCCCHHHHHHHHHHHhC-CccccCHH-HHHHHHHH
Q psy9147 32 DVTILCDGRKITAHKVILSACSSYF-RTIFR---ENPCQHPVVILKDINYEDIEAVLCFVYQ-GTVYISKS-RMDSFLKT 105 (236)
Q Consensus 32 Dv~i~v~~~~f~aHk~ILaa~S~yF-~~~f~---~~~~~~~~i~l~~v~~~~f~~~L~ylYt-g~i~i~~~-~v~~ll~~ 105 (236)
=|+|-|+|..|...+..|.....-+ -.++. ......+++-+ +=++..|+.+|.|+.+ |++..+.+ .+..+.+-
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E 131 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEE 131 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHHHHH
Confidence 3777899999999999997653221 11111 01123456666 5599999999999999 99887544 35668899
Q ss_pred HHHhCChhHH
Q psy9147 106 AESLQIKGLA 115 (236)
Q Consensus 106 A~~l~i~~L~ 115 (236)
|++|+|..+.
T Consensus 132 ~~f~~i~~~~ 141 (514)
T 2r9r_B 132 IRFYELGEEA 141 (514)
T ss_dssp HHHTTCCHHH
T ss_pred HHhcCCCHHH
Confidence 9999998864
No 38
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=59.23 E-value=7.6 Score=29.33 Aligned_cols=32 Identities=13% Similarity=0.014 Sum_probs=29.0
Q ss_pred cCHHHHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 94 ISKSRMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 94 i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
++.+++..++.+|..|+++.|.+.|..++..+
T Consensus 132 l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~ 163 (172)
T 3htm_A 132 LSVENAAEILILADLHSADQLKTQAVDFINYH 163 (172)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 57789999999999999999999999997665
No 39
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=47.99 E-value=13 Score=31.10 Aligned_cols=32 Identities=13% Similarity=0.014 Sum_probs=29.0
Q ss_pred cCHHHHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 94 ISKSRMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 94 i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
++.+++..++.+|..+++..|++.|.+++..+
T Consensus 272 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 272 LSVENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999998765
No 40
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=31.15 E-value=36 Score=27.89 Aligned_cols=32 Identities=16% Similarity=0.019 Sum_probs=28.2
Q ss_pred cCHHHHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 94 ISKSRMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 94 i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
++.+++..++..|..+++..|.+.|..++..+
T Consensus 139 l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 170 (279)
T 3i3n_A 139 LHLSNCVAIHSLAHMYTLSQLALKAADMIRRN 170 (279)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCcchHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 67789999999999999999999998887544
No 41
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=28.25 E-value=30 Score=27.94 Aligned_cols=32 Identities=6% Similarity=-0.087 Sum_probs=27.8
Q ss_pred cCHHHHHHHHHHHHHhCChhHHHHHHHHhhcc
Q psy9147 94 ISKSRMDSFLKTAESLQIKGLAGASNMMGDNE 125 (236)
Q Consensus 94 i~~~~v~~ll~~A~~l~i~~L~~~c~~~l~~~ 125 (236)
++.+++..++..|..+++..|.+.|..++..+
T Consensus 131 l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 162 (256)
T 3hve_A 131 IAAENCIGIRDFALHYCLHHVHYLATEYLETH 162 (256)
T ss_dssp CCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 56678999999999999999999998887543
Done!