RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9150
(97 letters)
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 55.6 bits (133), Expect = 2e-12
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
+ + F C A G P P + W K+G E + ++ + ++ D G
Sbjct: 20 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH----WSLIMESVVPSDKG 75
Query: 72 IYECYADNMYNVDTRTFK 89
Y C +N Y T+
Sbjct: 76 NYTCVVENEYGSINHTYH 93
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 52.7 bits (125), Expect = 5e-11
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 10 VLGHKIVFICMAKGKPRPHITWFKDGVEL--------YTHMYVNLHEWHYGTDRIKSKIE 61
V+G + F+C +PHI W K + ++ V TD+ +
Sbjct: 18 VVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLY 77
Query: 62 IDPATQMDAGIYECYADNMYNVDTRTFK 89
I T DAG Y C A N + +
Sbjct: 78 IRNVTFEDAGEYTCLAGNSIGISFHSAW 105
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 51.8 bits (123), Expect = 8e-11
Identities = 14/84 (16%), Positives = 24/84 (28%), Gaps = 5/84 (5%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
D + G + G TW K ++ ++ + G+ K+ I A
Sbjct: 9 DQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGS-----KLTILAA 63
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
Q G Y +N
Sbjct: 64 RQEHCGCYTLLVENKLGSRQAQVN 87
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 49.1 bits (116), Expect = 8e-10
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 11 LGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 70
LG + +C A G P P ++W KDG + + + S++ I + D
Sbjct: 19 LGQSVTLVCDADGFPEPTMSWTKDGEPIENEEE---DDEKHIFSDDSSELTIRNVDKNDE 75
Query: 71 GIYECYADNMYNVDTRTFK 89
Y C A+N +
Sbjct: 76 AEYVCIAENKAGEQDASIH 94
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 49.2 bits (116), Expect = 9e-10
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 2/85 (2%)
Query: 7 YEYVLGHKIVFICMAKGKPRPHITWFKDGVEL--YTHMYVNLHEWHYGTDRIKSKIEIDP 64
+ V H G+P P + W +G L + ++ E + ++
Sbjct: 10 HTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQ 69
Query: 65 ATQMDAGIYECYADNMYNVDTRTFK 89
T ++ G Y A N + + +
Sbjct: 70 PTHVNNGNYTLLAANPFGQASASIM 94
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 47.7 bits (112), Expect = 4e-09
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
Query: 2 HSHFDYEYVLGHKIVFICMAK-GKPRPHITWFKDGVELYT---HMYVNLHEWHYGTDRIK 57
+G++ V C G P +WFKDG+ + T + D
Sbjct: 7 TISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKS 66
Query: 58 SKIEIDPATQMDAGIYECYADNMYNVDTRT 87
+ DP T D+G Y C A N Y R+
Sbjct: 67 GDLIFDPVTAFDSGEYYCQAQNGYGTAMRS 96
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 46.9 bits (110), Expect = 6e-09
Identities = 19/82 (23%), Positives = 28/82 (34%)
Query: 8 EYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQ 67
H KG P+P + WF +G L Y+ +++D T
Sbjct: 12 SPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTH 71
Query: 68 MDAGIYECYADNMYNVDTRTFK 89
M+ G Y A N Y D +
Sbjct: 72 MNNGDYTLIAKNEYGKDEKQIS 93
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 46.1 bits (108), Expect = 1e-08
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
G + C +G P I W KDG + + + + + + DAG
Sbjct: 11 GQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWI---GFLSLKSVERSDAG 67
Query: 72 IYECYADNMYNVDT 85
Y C ++ +
Sbjct: 68 RYWCQVEDGGETEI 81
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 45.9 bits (108), Expect = 1e-08
Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 10/78 (12%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
G + C G P P++ W + L + I D G
Sbjct: 18 GQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSG----------LVIKGVKNGDKG 67
Query: 72 IYECYADNMYNVDTRTFK 89
Y C A N +
Sbjct: 68 YYGCRATNEHGDKYFETL 85
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 45.8 bits (107), Expect = 2e-08
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 4 HFDYEYVLGHKIVFICMAK-GKPRPHITWFKDGVELYTHMYVNLHEWHYG--TDRIKSKI 60
+ +G++ V C + G P TWFKDG+ + T+ + + ++
Sbjct: 9 NIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGEL 68
Query: 61 EIDPATQMDAGIYECYADNMYNVDTRT 87
DP + D G Y C A N Y +
Sbjct: 69 VFDPLSASDTGEYSCEARNGYGTPMTS 95
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 43.7 bits (102), Expect = 8e-08
Identities = 19/84 (22%), Positives = 26/84 (30%), Gaps = 11/84 (13%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
D + G + C A G P P I W + + I
Sbjct: 14 DTYALTGQMVTLECFAFGNPVPQIKW-----------RKLDGSQTSKWLSSEPLLHIQNV 62
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
D G YEC A+N+ DT +
Sbjct: 63 DFEDEGTYECEAENIKGRDTYQGR 86
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 42.9 bits (100), Expect = 2e-07
Identities = 18/78 (23%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
G F C G+P P +TW + + T + KS EI D G
Sbjct: 14 GESARFSCDTDGEPVPTVTWLR-----KGQVLSTSARHQVTTTKYKSTFEISSVQASDEG 68
Query: 72 IYECYADNMYNVDTRTFK 89
Y +N F
Sbjct: 69 NYSVVVENSEGKQEAEFT 86
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 42.9 bits (100), Expect = 2e-07
Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 4/84 (4%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
G F GKP P W+K+GV++ + Y + ++ I
Sbjct: 13 SQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSD----RIYWYWPEDNVCELVIRDV 68
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
T D+ A N+ +
Sbjct: 69 TGEDSASIMVKAINIAGETSSHAF 92
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 41.8 bits (97), Expect = 6e-07
Identities = 18/84 (21%), Positives = 22/84 (26%), Gaps = 5/84 (5%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
E G F C P +TW KD EL + + I+
Sbjct: 10 GTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGN-----DYGLTINRV 64
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
D G Y A N Y
Sbjct: 65 KGDDKGEYTVRAKNSYGTKEEIVF 88
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 41.1 bits (95), Expect = 1e-06
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Query: 8 EYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQ 67
E L + + +G P P + W +G L +++ + G + + + T
Sbjct: 13 EPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEIS-EGCLLFNKPTH 71
Query: 68 MDAGIYECYADNMYNVDTRTFK 89
+ G Y A N +T
Sbjct: 72 YNNGNYTLIAKNPLGTANQTIN 93
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 40.7 bits (94), Expect = 1e-06
Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 6/82 (7%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
E+ G V +C P I W G ++ V +I+
Sbjct: 10 PQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRG------I 63
Query: 66 TQMDAGIYECYADNMYNVDTRT 87
+ D G Y C + +
Sbjct: 64 KKTDEGTYRCEGRILARGEINF 85
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 40.6 bits (94), Expect = 1e-06
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
D E +G + + C+A GKPRP + W +DG L + + +
Sbjct: 10 DTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGEL---------RFSKL 60
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
D+G+Y+C A+N + + +
Sbjct: 61 VLEDSGMYQCVAENKHGTVYASAE 84
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 40.4 bits (93), Expect = 2e-06
Identities = 6/71 (8%), Positives = 12/71 (16%), Gaps = 6/71 (8%)
Query: 12 GHKIVFICMAKG---KPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQM 68
G C + F+ L+ + +
Sbjct: 17 GKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATAT---FNSTADRED 73
Query: 69 DAGIYECYADN 79
+ C A
Sbjct: 74 GHRNFSCLAVL 84
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 39.8 bits (92), Expect = 3e-06
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
D G ++ C + ++ WFK+G E+ + + K + I+ A
Sbjct: 9 DTTAYCGERVELECEV-SEDDANVKWFKNGEEIIPGPK---SRYRIRVEGKKHILIIEGA 64
Query: 66 TQMDAGIYECYADN 79
T+ DA Y
Sbjct: 65 TKADAAEYSVMTTG 78
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 40.4 bits (93), Expect = 3e-06
Identities = 15/102 (14%), Positives = 26/102 (25%), Gaps = 24/102 (23%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYG------------------- 52
G+K+ G P P + W K + +
Sbjct: 24 GNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEG 83
Query: 53 -----TDRIKSKIEIDPATQMDAGIYECYADNMYNVDTRTFK 89
T + +S ++ A + D G+Y N D
Sbjct: 84 RVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLT 125
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 39.9 bits (92), Expect = 4e-06
Identities = 22/84 (26%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
D E V G F C +G P P + WFKD + + + G + I
Sbjct: 17 DMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEG----NCSLTISEV 72
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
D Y C A N T T +
Sbjct: 73 CGDDDAKYTCKAVNSLGEATCTAE 96
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 39.5 bits (91), Expect = 4e-06
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
D G + CM P + +FK+G ++ + + + + ++
Sbjct: 12 DMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSG---KRLLFKTT 68
Query: 66 TQMDAGIYECYADN 79
D G+Y C DN
Sbjct: 69 LPEDEGVYTCEVDN 82
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 38.7 bits (89), Expect = 7e-06
Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 6/70 (8%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
K+ C A+ P W +G EL + +P DAG
Sbjct: 22 EEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL------VISNPVKAKDAG 75
Query: 72 IYECYADNMY 81
Y+C A N
Sbjct: 76 SYQCVATNAR 85
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 38.5 bits (88), Expect = 1e-05
Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
+ E G F C A G+ + G+ + R + +
Sbjct: 10 NVEVNAGQFATFQCSAIGRTVAGDRLWLQGI--DVRDAPLKEIKVTSSRRFIASFNVVNT 67
Query: 66 TQMDAGIYECYADNMYNVDTRTF 88
T+ DAG Y C V +
Sbjct: 68 TKRDAGKYRCMIRTEGGVGISNY 90
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 38.5 bits (88), Expect = 1e-05
Identities = 16/69 (23%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Query: 12 GHKIVFICMAKGKP-RPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 70
G C K RPH+TW K + W + + +P D
Sbjct: 18 GDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDN 77
Query: 71 GIYECYADN 79
G Y C A+
Sbjct: 78 GSYRCSANF 86
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 36.7 bits (84), Expect = 5e-05
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 5/73 (6%)
Query: 7 YEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPAT 66
Y+ GHKI + W K+G E+ ++ + + K + I +
Sbjct: 16 YQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSG----SKYIFESIGAKRTLTISQCS 70
Query: 67 QMDAGIYECYADN 79
D Y+C
Sbjct: 71 LADDAAYQCVVGG 83
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 36.3 bits (82), Expect = 9e-05
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 8/90 (8%)
Query: 8 EYVLGHKIVFICMAKGKPRPHITWFKDGVE-------LYTHMYVNLHEWHYGTDRIKSKI 60
E LG +I IC G+ W +G L Y + + + + +
Sbjct: 13 EVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVL 72
Query: 61 EIDPATQMDAGI-YECYADNMYNVDTRTFK 89
I + C+A N + +D +
Sbjct: 73 NISEIESRFYKHPFTCFAKNTHGIDAAYIQ 102
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 35.7 bits (81), Expect = 1e-04
Identities = 9/71 (12%), Positives = 17/71 (23%), Gaps = 9/71 (12%)
Query: 10 VLGHKIVFICMAK-GKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQM 68
+ G + C + + W +H + +
Sbjct: 19 LPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRR--------LLLRSVQLH 70
Query: 69 DAGIYECYADN 79
D+G Y CY
Sbjct: 71 DSGNYSCYRAG 81
>d1l6xa2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 35.3 bits (81), Expect = 1e-04
Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 10 VLGHKIVFICMAKG--KPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQ 67
+ +++ C+ KG + W +G + G+ + SK+ +D +
Sbjct: 17 LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRW 76
Query: 68 MDAGIYEC 75
++ C
Sbjct: 77 QQGNVFSC 84
>d1fp5a2 b.1.1.2 (A:439-543) Immunoglobulin heavy chain epsilon
constant domain 4, CH4-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 35.5 bits (81), Expect = 1e-04
Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Query: 11 LGHKIVFICMAKGK--PRPHITWFKDGVELYTHMYVNLH--EWHYGTDRIKSKIEIDPAT 66
K C+ + + W + V+L + + + S++E+ A
Sbjct: 18 SRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAE 77
Query: 67 QMDAGIYEC 75
+ C
Sbjct: 78 WEQKDEFIC 86
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 35.3 bits (80), Expect = 2e-04
Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 12 GHKIVFICMAK-GKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 70
G + FIC AK P + W + ++ + + I DA
Sbjct: 17 GADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFN----------GILTIRNVQPSDA 66
Query: 71 GIYECYADNMYNVDTRTFK 89
G Y C NM+ +D T
Sbjct: 67 GTYVCTGSNMFAMDQGTAT 85
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 34.5 bits (78), Expect = 3e-04
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 6/75 (8%)
Query: 10 VLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIK-----SKIEIDP 64
V+ + F + P + W K ++ + +R+ + I
Sbjct: 8 VVYGNVTFHVPS-NVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYN 66
Query: 65 ATQMDAGIYECYADN 79
T D YE + N
Sbjct: 67 LTSSDEDEYEMESPN 81
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 34.2 bits (77), Expect = 5e-04
Identities = 17/91 (18%), Positives = 23/91 (25%), Gaps = 7/91 (7%)
Query: 6 DYEYVLGHKIVFICMAKGKP---RPHITWFKDGVELY----THMYVNLHEWHYGTDRIKS 58
D E +G I F G P + WFK + +
Sbjct: 13 DGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLF 72
Query: 59 KIEIDPATQMDAGIYECYADNMYNVDTRTFK 89
++ I A G Y C D F
Sbjct: 73 ELHITDAQPAFTGGYRCEVSTKDKFDCSNFN 103
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 33.9 bits (76), Expect = 7e-04
Identities = 11/81 (13%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHY--GTDRIKSKIEIDPATQMD 69
G + +C ++ P + + +N E + + + +S++ I+
Sbjct: 17 GETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA 76
Query: 70 -AGIYECYADNMYNVDTRTFK 89
G Y C + D
Sbjct: 77 DPGQYRCNGTSSKGSDQAIIT 97
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 33.4 bits (75), Expect = 8e-04
Identities = 15/84 (17%), Positives = 21/84 (25%), Gaps = 5/84 (5%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
+ G G P P TW E + I A
Sbjct: 11 KIKIKAGFTHNLEVDFIGAPDPTATWTV-----GDSGAALAPELLVDAKSSTTSIFFPSA 65
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
+ D+G Y+ N D F+
Sbjct: 66 KRADSGNYKLKVKNELGEDEAIFE 89
>d1i1ca2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 102
Score = 33.5 bits (76), Expect = 9e-04
Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 10 VLGHKIVFICMAKG-KPRPH-ITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQ 67
+ ++ CM KG P W +G + G+ + SK+ + T
Sbjct: 17 MTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETW 76
Query: 68 MDAGIYEC 75
+ C
Sbjct: 77 QQGNTFTC 84
>d1k5nb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 33.0 bits (75), Expect = 0.001
Identities = 11/67 (16%), Positives = 18/67 (26%), Gaps = 5/67 (7%)
Query: 11 LGHKIVFICMAKGKPRPHI--TWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQM 68
G C G I K+G + + +L + + E P
Sbjct: 18 NGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPT--- 74
Query: 69 DAGIYEC 75
+ Y C
Sbjct: 75 EKDEYAC 81
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 33.0 bits (74), Expect = 0.001
Identities = 16/87 (18%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 4 HFDYEYVLGHKIVFICMA-KGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEI 62
V C + + ITW+KD + + K K+
Sbjct: 9 KIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH-----KEKLWF 63
Query: 63 DPATQMDAGIYECYADNMYNVDTRTFK 89
PA D+G Y C N
Sbjct: 64 VPAKVEDSGHYYCVVRNSSYCLRIKIS 90
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 33.1 bits (75), Expect = 0.001
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 14 KIVFICMAKG-KPRP-HITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
I +C+ G P ITW +DG + + +S++ + +
Sbjct: 23 TIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDR 82
Query: 72 IYEC 75
Y C
Sbjct: 83 TYTC 86
>d1igtb4 b.1.1.2 (B:363-474) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Mouse (Mus musculus),
gamma2 [TaxId: 10090]}
Length = 102
Score = 33.0 bits (75), Expect = 0.001
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 8 EYVLGHKIVFICMAKG-KPRP-HITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
E + ++ CM P ++ W +G + G+ + SK+ ++
Sbjct: 15 EEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKK 74
Query: 66 TQMDAGIYEC 75
++ Y C
Sbjct: 75 NWVERNSYSC 84
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 32.7 bits (73), Expect = 0.001
Identities = 14/84 (16%), Positives = 21/84 (25%), Gaps = 18/84 (21%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
++ + + +C A G P P + KDG
Sbjct: 13 NWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD--------------- 57
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
G Y C A + TR
Sbjct: 58 ---LEGTYLCRARSTQGEVTREVT 78
>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens) [TaxId:
9606]}
Length = 102
Score = 32.7 bits (74), Expect = 0.002
Identities = 11/85 (12%), Positives = 20/85 (23%), Gaps = 3/85 (3%)
Query: 8 EYVLGHKIVFICMAKG--KPRPHITWFKDGVELYTHMYVNLHEWHY-GTDRIKSKIEIDP 64
E + K +C + W DG + M S + +
Sbjct: 16 EELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTA 75
Query: 65 ATQMDAGIYECYADNMYNVDTRTFK 89
Y C + + +T
Sbjct: 76 RAWERHSSYSCQVTHEGHSSNKTLS 100
>d1mjul2 b.1.1.2 (L:108-214) Immunoglobulin light chain kappa
constant domain, CL-kappa {Mouse (Mus musculus) [TaxId:
10090]}
Length = 107
Score = 32.7 bits (74), Expect = 0.002
Identities = 10/72 (13%), Positives = 20/72 (27%), Gaps = 4/72 (5%)
Query: 8 EYVLGHKIVFICMAKG--KPRPHITWFKDGVELYTHMYVNLHEWHY--GTDRIKSKIEID 63
E + +C ++ W DG E + + + T + S + +
Sbjct: 16 EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 75
Query: 64 PATQMDAGIYEC 75
Y C
Sbjct: 76 KDEYERHNSYTC 87
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 32.8 bits (73), Expect = 0.002
Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Query: 3 SHFDYEYVLGHKIVFICMAKGKPRPHITWF-KDGVELYTHMYVNLHEWHYGTDR-IKSKI 60
S + G K C + P P + L + T+ + S +
Sbjct: 12 STQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTL 71
Query: 61 EIDPAT-QMDAGIYECYADNMYNVDTRTFK 89
I IY C A N + DT +
Sbjct: 72 TISNIVRADFQTIYNCTAWNSFGSDTEIIR 101
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 32.7 bits (73), Expect = 0.002
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 7/91 (7%)
Query: 6 DYEYVLGHKIVFICMAKGKP---RPHITWFKDGVELYTHMYVNLHEWHYGTDRI----KS 58
+G I FI K + +P I WFK + +R
Sbjct: 9 GGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTF 68
Query: 59 KIEIDPATQMDAGIYECYADNMYNVDTRTFK 89
+++I A AG Y C D+ +F
Sbjct: 69 EMQIIKAKDNFAGNYRCEVTYKDKFDSCSFD 99
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 32.1 bits (72), Expect = 0.003
Identities = 12/91 (13%), Positives = 22/91 (24%), Gaps = 14/91 (15%)
Query: 11 LGHKIVFIC------MAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDP 64
+ +C + P + W+KD L K ++ +
Sbjct: 13 VAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGV--------KDRLIVMN 64
Query: 65 ATQMDAGIYECYADNMYNVDTRTFKTDFSIT 95
+ G Y C+A Y
Sbjct: 65 VAEKHRGNYTCHASYTYLGKQYPITRVIEFI 95
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.8 bits (71), Expect = 0.004
Identities = 6/71 (8%), Positives = 18/71 (25%), Gaps = 11/71 (15%)
Query: 12 GHKIVFICMAKG---KPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQM 68
G ++ C +G + + + + EL + + +
Sbjct: 19 GKQLTLRCQVEGGAPRAQLTVVLLRGEKEL--------KREPAVGEPAEVTTTVLVRRDH 70
Query: 69 DAGIYECYADN 79
+ C +
Sbjct: 71 HGAQFSCRTEL 81
>d1nfde2 b.1.1.2 (E:108-215) Immunoglobulin light chain lambda
constant domain, CL-lambda {Hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 104
Score = 31.6 bits (71), Expect = 0.005
Identities = 8/84 (9%), Positives = 21/84 (25%), Gaps = 2/84 (2%)
Query: 8 EYVLGHKIVFICMAKGK--PRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
E + +K +C+ +TW +G + + S + +
Sbjct: 16 EELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTAD 75
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
C + ++
Sbjct: 76 QWKSHNRVSCQVTHEGETVEKSLS 99
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 31.2 bits (69), Expect = 0.005
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 5/76 (6%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
+ + + V C+ +G + +K N E + + + +
Sbjct: 11 EVLFRENNPTVLECIIEGNDQGVKYSWK-----KDGKSYNWQEHNAALRKDEGSLVFLRP 65
Query: 66 TQMDAGIYECYADNMY 81
D G Y+C+A+
Sbjct: 66 QASDEGHYQCFAETPA 81
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 31.2 bits (69), Expect = 0.005
Identities = 16/87 (18%), Positives = 22/87 (25%), Gaps = 3/87 (3%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRI---KSKIEI 62
D + I C G P + W + N DR+ S I
Sbjct: 10 DVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITF 69
Query: 63 DPATQMDAGIYECYADNMYNVDTRTFK 89
T+ D G Y C +
Sbjct: 70 SSVTRKDNGEYTCMVSEEGGQNYGEVS 96
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 30.9 bits (69), Expect = 0.006
Identities = 13/74 (17%), Positives = 18/74 (24%), Gaps = 6/74 (8%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
E +G F +P H W G L + E K + +
Sbjct: 10 GVEVFVGETAHFEIEL-SEPDVHGQWKLKGQPLTASPDCEIIEDGK-----KHILILHNC 63
Query: 66 TQMDAGIYECYADN 79
G A N
Sbjct: 64 QLGMTGEVSFQAAN 77
>d1d5mb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DR group [TaxId:
9606]}
Length = 98
Score = 30.0 bits (67), Expect = 0.017
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 11 LGHKIVFICMAKGKPRPHI--TWFKDGVELYTHMY-VNLHEWHYGTDRIKSKIEIDPATQ 67
L H + +C G I WF++G E T + L + T + +E P
Sbjct: 17 LQHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPR-- 74
Query: 68 MDAGIYEC 75
+Y C
Sbjct: 75 -SGEVYTC 81
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 30.0 bits (67), Expect = 0.017
Identities = 12/66 (18%), Positives = 17/66 (25%), Gaps = 5/66 (7%)
Query: 11 LGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 70
L + C A Y + L W+ + ID A
Sbjct: 20 LDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWN----ETDPEFVIDHMDANKA 74
Query: 71 GIYECY 76
G Y+C
Sbjct: 75 GRYQCQ 80
>d1ogae2 b.1.1.2 (E:119-245) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 127
Score = 30.1 bits (67), Expect = 0.017
Identities = 10/77 (12%), Positives = 27/77 (35%), Gaps = 9/77 (11%)
Query: 8 EYVLGHKIVFICMAKGK--PRPHITWFKDGVELYTHMYVNLHEWHY------GTDRIKSK 59
E K +C+A G ++W+ +G E+++ + + + S+
Sbjct: 16 EISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSR 75
Query: 60 IEIDPATQMDAG-IYEC 75
+ + + + C
Sbjct: 76 LRVSATFWQNPRNHFRC 92
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 30.1 bits (66), Expect = 0.019
Identities = 15/87 (17%), Positives = 23/87 (26%), Gaps = 3/87 (3%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKS---KIEI 62
+ + + C G P + W D + + N DR+ I
Sbjct: 13 EVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITF 72
Query: 63 DPATQMDAGIYECYADNMYNVDTRTFK 89
T+ D G Y C K
Sbjct: 73 KSVTREDTGTYTCMVSEEGGNSYGEVK 99
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 29.7 bits (65), Expect = 0.019
Identities = 8/84 (9%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Query: 6 DYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
+ +G ++ C +G+ W +E + + +
Sbjct: 11 NASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSL------GLTLANVT 64
Query: 66 TQMDAGIYECYADNMYNVDTRTFK 89
+ ++ C+A+N + +
Sbjct: 65 SDLNRKNVTCWAENDVGRAEVSVQ 88
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 30.0 bits (66), Expect = 0.019
Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Query: 12 GHKIVFICMA-KGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 70
G ++F C P W + + + I D
Sbjct: 19 GWGVMFTCSPPPHYPALSYRWLL-----NEFPNFIPADGRRFVSQTTGNLYIAKTEASDL 73
Query: 71 GIYECYADNMYNVDTRTFKTDF 92
G Y C+A + + T++ + F
Sbjct: 74 GNYSCFATSHIDFITKSVFSKF 95
>d1cqka_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant
domain 3, CH3-gamma {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 29.6 bits (66), Expect = 0.027
Identities = 9/70 (12%), Positives = 20/70 (28%), Gaps = 2/70 (2%)
Query: 8 EYVLGHKIVFICMAKG--KPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPA 65
E + + CM + W +G + G+ + SK+ + +
Sbjct: 14 EQMAKDLVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKS 73
Query: 66 TQMDAGIYEC 75
+ C
Sbjct: 74 NWEAGNTFTC 83
>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}
Length = 101
Score = 29.2 bits (65), Expect = 0.033
Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 11 LGHKIVFICMAKG--KPRPHITWFKDGVELYTHMY-VNLHEWHYGTDRIKSKIEIDPATQ 67
LG + IC P ++TW ++G + + R + P+
Sbjct: 18 LGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPS-- 75
Query: 68 MDAGIYEC 75
Y+C
Sbjct: 76 -TDDFYDC 82
>d1uvqb1 b.1.1.2 (B:95-191) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 97
Score = 28.8 bits (64), Expect = 0.041
Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 11 LGHKIVFICMAKG-KPRP-HITWFKDGVELYTHMY-VNLHEWHYGTDRIKSKIEIDPATQ 67
L H + +C P + WF++ E + L T +I +E+ P
Sbjct: 15 LNHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTP--- 71
Query: 68 MDAGIYEC 75
+Y C
Sbjct: 72 QRGDVYTC 79
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 28.4 bits (63), Expect = 0.063
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 6/68 (8%)
Query: 11 LGHKIVFICMAKG-KPRP-HITWFKDGVELYTHMY-VNLHEWHYGTDRIKSKIEIDPATQ 67
++ C G P ITW K+G + T + S + + P+
Sbjct: 16 TREPVMLACYVWGFYPAEVTITWRKNGKLVMHSSAHKTAQPNGDWTYQTLSHLALTPS-- 73
Query: 68 MDAGIYEC 75
Y C
Sbjct: 74 -YGDTYTC 80
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 28.0 bits (62), Expect = 0.078
Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 11 LGHKIVFICMAKG-KPRP-HITWFKDGVELYTHMY-VNLHEWHYGTDRIKSKIEIDPATQ 67
LG IC+ P +ITW +G + + + + S + P+
Sbjct: 18 LGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPS-- 75
Query: 68 MDAGIYEC 75
IY+C
Sbjct: 76 -ADEIYDC 82
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 28.0 bits (61), Expect = 0.095
Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 14/71 (19%)
Query: 12 GHKIVFICMAK-GKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 70
G IV C + KP +T+F+ + R I A +
Sbjct: 15 GETIVLRCHSWKDKPLVKVTFFQ-------------NGKSKKFSRSDPNFSIPQANHSHS 61
Query: 71 GIYECYADNMY 81
G Y C + Y
Sbjct: 62 GDYHCTGNIGY 72
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 28.1 bits (61), Expect = 0.11
Identities = 7/98 (7%), Positives = 19/98 (19%), Gaps = 18/98 (18%)
Query: 10 VLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSK---------- 59
++G + C ++ + +
Sbjct: 15 LVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKE 74
Query: 60 --------IEIDPATQMDAGIYECYADNMYNVDTRTFK 89
+ I D G Y C+ + + +
Sbjct: 75 SIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVE 112
>d1lk2b_ b.1.1.2 (B:) beta2-microglobulin {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 27.7 bits (61), Expect = 0.13
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 5/67 (7%)
Query: 11 LGHKIVFICMAKG-KPRP-HITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQM 68
G + C P I K+G ++ ++ + I + E P
Sbjct: 17 NGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTP---T 73
Query: 69 DAGIYEC 75
+ Y C
Sbjct: 74 ETDTYAC 80
>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 27.3 bits (60), Expect = 0.17
Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
G + C ++ K+G + + L+ + ++ + P +
Sbjct: 18 GGNVTLQCDSQV-AFDGFILCKEGEDEHPQC---LNSQPHARGSSRAIFSVGPVSPSRRW 73
Query: 72 IYECY 76
Y CY
Sbjct: 74 WYRCY 78
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 26.4 bits (57), Expect = 0.34
Identities = 12/68 (17%), Positives = 17/68 (25%), Gaps = 14/68 (20%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
+ C P + T + S ID AT D+G
Sbjct: 20 KDSVTLKCQGAYSPEDNSTQW--------------FHNESLISSQASSYFIDAATVNDSG 65
Query: 72 IYECYADN 79
Y C +
Sbjct: 66 EYRCQTNL 73
>d1muja1 b.1.1.2 (A:84-183) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}
Length = 100
Score = 25.8 bits (56), Expect = 0.53
Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 11 LGHKIVFICMAKG--KPRPHITWFKDGVELYTHMYVNLHEWHY-GTDRIKSKIEIDPATQ 67
LG IC P +ITW ++ + +Y + + S + P
Sbjct: 16 LGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIP--- 72
Query: 68 MDAGIYEC 75
D IY+C
Sbjct: 73 SDDDIYDC 80
>d1i1ca1 b.1.1.2 (A:239-341) Immunoglobulin heavy chain gamma
constant domain 2, CH2-gamma {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 103
Score = 25.7 bits (56), Expect = 0.56
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 11 LGHKIVFICMAKG-KPRPH---ITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPAT 66
G C+ +WF D VE++T + T R S++ I
Sbjct: 15 GGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERD 74
Query: 67 QMDAGIYEC 75
++ ++C
Sbjct: 75 WLNGKTFKC 83
>d2mhaa1 b.1.1.2 (A:182-270) Class I MHC, alpha-3 domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 89
Score = 25.7 bits (56), Expect = 0.57
Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 12 GHKIVFICMAKG-KPRP-HITWFKDGVELYTHMYVN-LHEWHYGTDRIKSKIEIDPATQM 68
K+ C A G P +TW +G EL M + GT + + + +
Sbjct: 15 EDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVPLG--- 71
Query: 69 DAGIYEC 75
Y C
Sbjct: 72 KEQYYTC 78
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 25.7 bits (55), Expect = 0.59
Identities = 11/75 (14%), Positives = 18/75 (24%), Gaps = 14/75 (18%)
Query: 12 GHKIVFICMAKG-KPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDA 70
I C + +T+ ++ S I AT D+
Sbjct: 17 EDPIHLRCHSWKNTALHKVTYLQN-------------GKDRKYFHHNSDFHIPKATLKDS 63
Query: 71 GIYECYADNMYNVDT 85
G Y C +
Sbjct: 64 GSYFCRGLVGSKNVS 78
>d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 25.8 bits (56), Expect = 0.62
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 6/67 (8%)
Query: 12 GHKIVFICMAKG-KPRP-HITWFKDGVELYTHMYVNLHEW-HYGTDRIKSKIEIDPATQM 68
H+ C A G P +TW +DG + + T + + + +
Sbjct: 15 DHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVV---PSG 71
Query: 69 DAGIYEC 75
+ Y C
Sbjct: 72 EEQRYTC 78
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 25.8 bits (55), Expect = 0.70
Identities = 13/84 (15%), Positives = 20/84 (23%), Gaps = 3/84 (3%)
Query: 10 VLGHKIVFICMAKGKPR-PHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKI--EIDPAT 66
+ G C+ P ITW K + V + + +
Sbjct: 15 IEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKED 74
Query: 67 QMDAGIYECYADNMYNVDTRTFKT 90
D Y C A N +
Sbjct: 75 VSDIYKYVCTAKNAAVDEEVVLVE 98
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 25.3 bits (54), Expect = 0.78
Identities = 6/81 (7%), Positives = 16/81 (19%), Gaps = 15/81 (18%)
Query: 6 DYEYVLGHKIVF-ICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDP 64
D I W++ ++
Sbjct: 10 DLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLN--------------V 55
Query: 65 ATQMDAGIYECYADNMYNVDT 85
+ ++ C A N+ + +
Sbjct: 56 TGVTQSTMFSCEAHNLKGLAS 76
>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human
(Homo sapiens), p58-cl42 kir [TaxId: 9606]}
Length = 96
Score = 25.4 bits (55), Expect = 0.85
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
++ C + H ++G+ T + H K+ I TQ AG
Sbjct: 16 EETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDG----VSKANFSISRMTQDLAG 70
Query: 72 IYECY 76
Y CY
Sbjct: 71 TYRCY 75
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 24.7 bits (53), Expect = 1.4
Identities = 12/86 (13%), Positives = 23/86 (26%), Gaps = 6/86 (6%)
Query: 10 VLGHKIVFIC--MAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSK--IEIDPA 65
LGH I + W + + G I + ++I
Sbjct: 8 ALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNL 67
Query: 66 TQMDAGIYECYADNMY--NVDTRTFK 89
T+ D+G Y + + +
Sbjct: 68 TRDDSGTYNVTVYSTNGTRILNKALD 93
>d2btva_ e.28.1.1 (A:) BTV vp3 {Bluetongue virus, strain 1 [TaxId:
40051]}
Length = 845
Score = 24.8 bits (54), Expect = 2.2
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 4/37 (10%)
Query: 55 RIKSKIEIDPATQMDAGIYE----CYADNMYNVDTRT 87
+I +DPA +M AG+ N+
Sbjct: 302 KIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNM 338
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 24.2 bits (51), Expect = 2.5
Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 8/85 (9%)
Query: 3 SHFDYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEI 62
S+ + + G C K F V E + + I
Sbjct: 3 SYRQHFFKHGGTAELKCSQKSNLARVFWKF--------QNGVLKAESPKYGLMGRKNLLI 54
Query: 63 DPATQMDAGIYECYADNMYNVDTRT 87
++ D+G+Y+C ++ T
Sbjct: 55 FNLSEGDSGVYQCLSEERVKNKTVF 79
>d1u58a1 b.1.1.2 (A:145-242) Immunomodulatory protein m144,
alpha-3 domain {Murine cytomegalovirus [TaxId: 10366]}
Length = 98
Score = 23.6 bits (50), Expect = 4.2
Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 10/69 (14%)
Query: 14 KIVFICMAKG-KPRP-HITWFKDGVELYTHMYVNLHEWH-----YGTDRIKSKIEIDPAT 66
+ C A+ P I W+KD + G + + +D
Sbjct: 16 GMRLRCFARDYYPADLEIRWWKDDGGGGALPQTSKQHHDPLPSGNGLYQKHIDVYVDGG- 74
Query: 67 QMDAGIYEC 75
+Y C
Sbjct: 75 --LEHVYSC 81
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 23.0 bits (48), Expect = 4.9
Identities = 11/68 (16%), Positives = 17/68 (25%), Gaps = 12/68 (17%)
Query: 12 GHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAG 71
G + C + + Y + + I I AT D+G
Sbjct: 15 GQPLFLRCHGWRNWDVYKVIY------YKDGEALKYWYEN------HNISITNATVEDSG 62
Query: 72 IYECYADN 79
Y C
Sbjct: 63 TYYCTGKV 70
>d1jbja1 b.1.1.4 (A:101-186) CD3 gamma chain ectodomain fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 86
Score = 23.0 bits (49), Expect = 6.2
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 12/53 (22%)
Query: 27 PHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKIEIDPATQMDAGIYECYADN 79
I W KDG + + + + W+ G DP G Y+C
Sbjct: 34 KTIKWLKDGSII-SPLNATKNTWNLG------NNAKDP-----RGTYQCQGAK 74
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 22.9 bits (48), Expect = 6.6
Identities = 9/95 (9%), Positives = 18/95 (18%), Gaps = 2/95 (2%)
Query: 1 MHSHFDYEYVLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSKI 60
D + + +W I
Sbjct: 26 SEWVSDDISFTWRY--QPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSI 83
Query: 61 EIDPATQMDAGIYECYADNMYNVDTRTFKTDFSIT 95
I D G + C N ++ +T + +
Sbjct: 84 VIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF 118
>d1u5ta1 a.4.5.54 (A:20-164) Vacuolar sorting protein SNF8
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 145
Score = 22.8 bits (49), Expect = 8.9
Identities = 5/17 (29%), Positives = 9/17 (52%)
Query: 6 DYEYVLGHKIVFICMAK 22
D+ Y + K++ IC
Sbjct: 71 DFYYEVCLKVIEICRQT 87
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 22.5 bits (47), Expect = 9.6
Identities = 10/83 (12%), Positives = 23/83 (27%), Gaps = 18/83 (21%)
Query: 10 VLGHKIVFICMAKGKPRPHITWFKDGVELYTHMYVNLHEWHYGTDRIKSK---------- 59
C + + + + V + L+E + G ++ S
Sbjct: 7 YFNETADLPC--QFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSF 64
Query: 60 ------IEIDPATQMDAGIYECY 76
+ + D G+Y+C
Sbjct: 65 DSDSWTLRLHNLQIKDKGLYQCI 87
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.140 0.465
Gapped
Lambda K H
0.267 0.0540 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 418,500
Number of extensions: 17853
Number of successful extensions: 232
Number of sequences better than 10.0: 1
Number of HSP's gapped: 196
Number of HSP's successfully gapped: 106
Length of query: 97
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 38
Effective length of database: 1,597,526
Effective search space: 60705988
Effective search space used: 60705988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.3 bits)