Query psy9152
Match_columns 324
No_of_seqs 338 out of 3131
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 20:16:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9152.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9152hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG5126 FRQ1 Ca2+-binding prot 99.9 6.4E-23 1.4E-27 166.6 14.4 147 48-205 9-157 (160)
2 KOG0027|consensus 99.9 2.7E-22 5.8E-27 165.3 15.8 142 53-204 2-149 (151)
3 KOG0028|consensus 99.8 2.5E-19 5.4E-24 142.5 13.7 144 51-204 25-170 (172)
4 PTZ00183 centrin; Provisional 99.8 1.2E-18 2.6E-23 144.1 15.1 144 51-204 9-154 (158)
5 KOG0037|consensus 99.8 1.1E-18 2.5E-23 146.1 14.8 161 58-271 56-217 (221)
6 PTZ00184 calmodulin; Provision 99.8 1.1E-18 2.4E-23 142.6 13.9 143 52-204 4-148 (149)
7 KOG4223|consensus 99.7 5.4E-17 1.2E-21 143.4 12.2 213 54-279 72-310 (325)
8 KOG0031|consensus 99.7 3.3E-16 7.1E-21 123.8 13.8 141 50-204 23-165 (171)
9 KOG0030|consensus 99.7 5.2E-16 1.1E-20 120.7 11.9 140 53-203 5-150 (152)
10 KOG0027|consensus 99.7 5.9E-16 1.3E-20 127.5 12.5 131 132-273 8-148 (151)
11 COG5126 FRQ1 Ca2+-binding prot 99.7 7.9E-16 1.7E-20 125.3 12.8 121 3-125 11-156 (160)
12 KOG0036|consensus 99.6 3.5E-14 7.5E-19 129.0 14.1 140 53-206 8-148 (463)
13 KOG0034|consensus 99.6 3.1E-14 6.6E-19 119.9 12.3 140 52-205 26-176 (187)
14 KOG0037|consensus 99.6 1.5E-14 3.2E-19 121.4 10.3 121 6-151 88-209 (221)
15 KOG4223|consensus 99.5 3.8E-14 8.2E-19 125.5 10.7 184 9-202 74-303 (325)
16 PTZ00183 centrin; Provisional 99.5 1.4E-13 3.1E-18 113.6 13.6 144 3-160 8-154 (158)
17 KOG0031|consensus 99.5 2E-13 4.3E-18 108.2 11.5 117 6-124 26-164 (171)
18 PTZ00184 calmodulin; Provision 99.5 3.4E-13 7.3E-18 110.0 13.5 144 2-159 1-147 (149)
19 KOG0044|consensus 99.5 6.1E-13 1.3E-17 112.1 13.4 142 52-205 22-176 (193)
20 KOG0028|consensus 99.4 3.1E-12 6.7E-17 102.2 10.4 125 132-273 33-169 (172)
21 KOG0030|consensus 99.3 2.6E-11 5.6E-16 94.7 10.8 115 7-124 6-150 (152)
22 KOG2643|consensus 99.2 9.3E-11 2E-15 107.6 10.4 193 59-278 233-457 (489)
23 PLN02964 phosphatidylserine de 99.1 3.9E-10 8.4E-15 111.2 12.1 117 52-174 136-271 (644)
24 KOG2643|consensus 99.1 1.3E-10 2.7E-15 106.7 7.1 183 12-208 233-457 (489)
25 KOG0044|consensus 99.1 1.7E-09 3.6E-14 91.4 13.2 121 75-206 8-130 (193)
26 cd05022 S-100A13 S-100A13: S-1 99.1 3.9E-10 8.5E-15 83.7 7.7 69 57-127 6-77 (89)
27 PF13499 EF-hand_7: EF-hand do 99.1 4.6E-10 1E-14 78.7 7.7 62 60-123 1-66 (66)
28 KOG4251|consensus 99.1 7.3E-10 1.6E-14 94.5 9.7 202 57-271 99-342 (362)
29 KOG0377|consensus 99.1 1.6E-09 3.5E-14 99.5 12.5 135 59-205 464-616 (631)
30 KOG0034|consensus 99.1 3.7E-09 8.1E-14 89.1 12.9 137 6-160 27-175 (187)
31 cd05022 S-100A13 S-100A13: S-1 99.0 3.1E-10 6.7E-15 84.3 5.0 66 133-206 9-77 (89)
32 PF13499 EF-hand_7: EF-hand do 99.0 4E-10 8.6E-15 79.1 4.9 61 134-202 2-66 (66)
33 cd05027 S-100B S-100B: S-100B 99.0 3.3E-09 7.1E-14 78.8 8.7 68 57-126 6-80 (88)
34 KOG0036|consensus 98.9 8.6E-09 1.9E-13 94.3 11.1 150 6-159 8-182 (463)
35 cd05027 S-100B S-100B: S-100B 98.9 3.6E-09 7.7E-14 78.6 6.2 66 133-206 9-81 (88)
36 PLN02964 phosphatidylserine de 98.9 2.3E-08 4.9E-13 98.9 12.8 107 6-126 137-244 (644)
37 smart00027 EH Eps15 homology d 98.9 1.4E-08 3E-13 76.9 8.9 71 53-127 4-74 (96)
38 cd05029 S-100A6 S-100A6: S-100 98.8 2.2E-08 4.8E-13 74.3 8.4 69 57-127 8-81 (88)
39 cd05026 S-100Z S-100Z: S-100Z 98.8 2.2E-08 4.9E-13 75.2 8.5 69 57-127 8-83 (93)
40 cd05031 S-100A10_like S-100A10 98.8 2.6E-08 5.5E-13 75.1 8.3 67 58-126 7-80 (94)
41 cd05025 S-100A1 S-100A1: S-100 98.8 3.1E-08 6.8E-13 74.3 8.6 69 57-127 7-82 (92)
42 cd00213 S-100 S-100: S-100 dom 98.8 3.5E-08 7.6E-13 73.4 7.9 70 55-126 4-80 (88)
43 cd05029 S-100A6 S-100A6: S-100 98.8 1.5E-08 3.3E-13 75.2 5.6 65 134-206 12-81 (88)
44 PF13833 EF-hand_8: EF-hand do 98.8 2.3E-08 5.1E-13 67.1 6.0 52 145-204 1-53 (54)
45 cd05031 S-100A10_like S-100A10 98.7 1.8E-08 4E-13 75.9 5.6 66 133-206 9-81 (94)
46 cd00052 EH Eps15 homology doma 98.7 4.2E-08 9.2E-13 68.6 7.1 61 62-126 2-62 (67)
47 PF13833 EF-hand_8: EF-hand do 98.7 6.2E-08 1.3E-12 65.0 6.9 52 72-125 1-53 (54)
48 cd00052 EH Eps15 homology doma 98.7 4E-08 8.7E-13 68.8 6.2 61 135-205 2-62 (67)
49 cd05026 S-100Z S-100Z: S-100Z 98.7 3.1E-08 6.7E-13 74.5 5.9 66 133-206 11-83 (93)
50 KOG4251|consensus 98.7 8.2E-08 1.8E-12 82.2 8.8 174 9-201 98-342 (362)
51 KOG0038|consensus 98.7 1.1E-07 2.3E-12 75.1 8.7 140 53-206 22-179 (189)
52 cd05025 S-100A1 S-100A1: S-100 98.7 4.5E-08 9.7E-13 73.5 6.1 67 132-206 9-82 (92)
53 cd05023 S-100A11 S-100A11: S-1 98.6 1.9E-07 4.1E-12 69.4 8.5 69 56-126 6-81 (89)
54 cd00051 EFh EF-hand, calcium b 98.6 2E-07 4.4E-12 63.3 7.6 61 61-123 2-62 (63)
55 cd00051 EFh EF-hand, calcium b 98.6 2E-07 4.4E-12 63.2 7.0 61 134-202 2-62 (63)
56 smart00027 EH Eps15 homology d 98.6 1.1E-07 2.4E-12 71.9 6.0 63 133-205 11-73 (96)
57 cd05023 S-100A11 S-100A11: S-1 98.6 1.6E-07 3.4E-12 69.9 5.9 65 133-205 10-81 (89)
58 cd00213 S-100 S-100: S-100 dom 98.5 1.4E-07 3E-12 70.1 5.5 65 133-205 9-80 (88)
59 KOG0040|consensus 98.5 1.1E-06 2.3E-11 91.1 12.1 144 50-203 2244-2397(2399)
60 KOG2562|consensus 98.5 1.4E-06 3E-11 81.2 11.4 175 13-200 226-420 (493)
61 cd00252 SPARC_EC SPARC_EC; ext 98.4 1.1E-06 2.3E-11 68.6 7.8 64 54-123 43-106 (116)
62 cd05030 calgranulins Calgranul 98.4 1.6E-06 3.6E-11 64.3 7.4 69 57-127 6-81 (88)
63 PF14658 EF-hand_9: EF-hand do 98.4 1.7E-06 3.7E-11 59.6 6.6 61 136-204 2-64 (66)
64 cd00252 SPARC_EC SPARC_EC; ext 98.3 1.1E-06 2.3E-11 68.6 5.3 59 133-203 49-107 (116)
65 KOG0377|consensus 98.3 6.2E-06 1.3E-10 76.3 10.5 65 59-125 547-615 (631)
66 cd05030 calgranulins Calgranul 98.2 1.8E-06 4E-11 64.1 4.9 64 134-205 10-80 (88)
67 KOG0041|consensus 98.2 3.8E-06 8.3E-11 70.0 7.0 74 52-127 92-165 (244)
68 PF14658 EF-hand_9: EF-hand do 98.1 1.4E-05 3E-10 55.2 7.1 61 64-125 3-64 (66)
69 PF00036 EF-hand_1: EF hand; 98.1 4.3E-06 9.3E-11 48.3 3.8 28 61-88 2-29 (29)
70 KOG0751|consensus 98.1 0.00012 2.5E-09 69.0 14.6 217 54-300 31-267 (694)
71 KOG0041|consensus 98.0 9.5E-06 2.1E-10 67.7 5.5 67 133-207 100-166 (244)
72 cd05024 S-100A10 S-100A10: A s 98.0 5.6E-05 1.2E-09 55.9 8.7 68 57-127 6-78 (91)
73 PF13405 EF-hand_6: EF-hand do 97.9 1.7E-05 3.6E-10 46.6 3.8 30 60-89 1-31 (31)
74 KOG0751|consensus 97.9 0.00026 5.7E-09 66.7 13.3 121 59-187 108-235 (694)
75 KOG0040|consensus 97.9 8E-05 1.7E-09 77.9 10.0 124 135-272 2256-2396(2399)
76 PF12763 EF-hand_4: Cytoskelet 97.9 9.2E-05 2E-09 56.5 8.0 70 52-126 3-72 (104)
77 cd05024 S-100A10 S-100A10: A s 97.8 6.3E-05 1.4E-09 55.6 6.3 64 134-206 10-78 (91)
78 PF00036 EF-hand_1: EF hand; 97.8 3.3E-05 7.2E-10 44.5 3.7 28 169-204 1-28 (29)
79 PF13405 EF-hand_6: EF-hand do 97.7 2E-05 4.3E-10 46.3 1.2 29 134-162 2-31 (31)
80 KOG2562|consensus 97.7 0.00062 1.4E-08 63.9 11.6 121 60-207 226-346 (493)
81 PF14788 EF-hand_10: EF hand; 97.6 0.00018 4E-09 46.8 5.0 48 149-204 2-49 (51)
82 KOG0038|consensus 97.6 0.00033 7.2E-09 55.6 7.3 96 18-126 77-178 (189)
83 PF13202 EF-hand_5: EF hand; P 97.5 0.00013 2.7E-09 40.6 3.2 25 61-85 1-25 (25)
84 KOG0169|consensus 97.4 0.0029 6.2E-08 63.0 12.5 143 52-207 129-277 (746)
85 PF14788 EF-hand_10: EF hand; 97.3 0.00095 2.1E-08 43.5 6.1 50 75-126 1-50 (51)
86 PF12763 EF-hand_4: Cytoskelet 97.3 0.00084 1.8E-08 51.3 6.2 61 134-205 12-72 (104)
87 KOG4666|consensus 97.2 0.00039 8.4E-09 62.4 3.9 120 71-206 239-361 (412)
88 PRK12309 transaldolase/EF-hand 97.1 0.0014 3.1E-08 61.8 7.6 58 89-160 328-385 (391)
89 PRK12309 transaldolase/EF-hand 97.1 0.0011 2.4E-08 62.5 6.7 54 58-126 333-386 (391)
90 KOG0046|consensus 97.1 0.002 4.3E-08 61.4 7.7 76 49-127 9-87 (627)
91 PF13202 EF-hand_5: EF hand; P 96.9 0.0015 3.2E-08 36.2 3.2 25 170-202 1-25 (25)
92 PF10591 SPARC_Ca_bdg: Secrete 96.8 0.00078 1.7E-08 52.4 2.3 64 54-121 49-112 (113)
93 KOG1029|consensus 96.8 0.01 2.2E-07 59.1 10.2 59 135-203 198-256 (1118)
94 KOG4666|consensus 96.7 0.0052 1.1E-07 55.3 6.9 102 58-161 258-360 (412)
95 PF10591 SPARC_Ca_bdg: Secrete 96.5 0.00047 1E-08 53.6 -0.9 56 135-200 57-112 (113)
96 KOG4065|consensus 96.0 0.029 6.3E-07 42.9 6.4 66 53-122 63-142 (144)
97 smart00054 EFh EF-hand, calciu 95.9 0.011 2.3E-07 32.6 3.0 27 61-87 2-28 (29)
98 KOG0046|consensus 95.5 0.02 4.4E-07 54.8 5.0 64 134-206 21-87 (627)
99 PF05042 Caleosin: Caleosin re 95.3 0.099 2.1E-06 43.3 7.6 100 59-160 7-124 (174)
100 smart00054 EFh EF-hand, calciu 95.2 0.018 3.9E-07 31.6 2.3 25 135-159 3-27 (29)
101 KOG0169|consensus 94.4 0.17 3.6E-06 50.9 8.1 112 135-276 139-255 (746)
102 KOG4065|consensus 94.4 0.091 2E-06 40.3 4.8 57 137-201 72-142 (144)
103 PF09279 EF-hand_like: Phospho 94.3 0.19 4.1E-06 36.4 6.4 63 61-126 2-70 (83)
104 KOG1707|consensus 93.9 0.42 9.2E-06 46.9 9.5 146 48-205 184-378 (625)
105 PF09279 EF-hand_like: Phospho 93.9 0.058 1.2E-06 39.2 3.0 64 135-207 3-72 (83)
106 KOG1707|consensus 92.2 0.4 8.6E-06 47.1 6.6 64 53-124 309-376 (625)
107 KOG0042|consensus 92.2 0.41 8.8E-06 46.7 6.6 74 52-127 586-659 (680)
108 PF05042 Caleosin: Caleosin re 91.8 1 2.3E-05 37.3 7.7 38 133-170 8-45 (174)
109 KOG1955|consensus 91.7 0.36 7.9E-06 46.1 5.5 69 5-87 224-293 (737)
110 KOG1029|consensus 90.8 0.35 7.7E-06 48.6 4.8 65 57-125 193-257 (1118)
111 KOG1955|consensus 90.8 0.67 1.4E-05 44.4 6.4 71 52-126 224-294 (737)
112 KOG0035|consensus 90.3 0.78 1.7E-05 47.4 6.8 108 46-156 734-848 (890)
113 KOG0035|consensus 89.2 2.2 4.8E-05 44.2 9.0 84 133-230 748-836 (890)
114 KOG4578|consensus 86.3 0.62 1.3E-05 42.3 2.9 63 136-206 337-400 (421)
115 PF05517 p25-alpha: p25-alpha 85.7 5.7 0.00012 32.5 8.1 63 62-126 5-70 (154)
116 KOG3555|consensus 84.1 1.2 2.5E-05 40.9 3.6 99 59-162 211-312 (434)
117 KOG2243|consensus 83.8 1.5 3.4E-05 46.9 4.7 62 136-206 4061-4122(5019)
118 KOG3866|consensus 83.5 4.6 9.9E-05 36.6 6.9 66 134-207 246-327 (442)
119 KOG4578|consensus 83.1 0.57 1.2E-05 42.6 1.1 70 56-127 330-400 (421)
120 KOG2243|consensus 81.6 2.4 5.3E-05 45.6 5.1 59 64-125 4062-4120(5019)
121 KOG3866|consensus 80.4 3.6 7.8E-05 37.3 5.2 22 16-37 248-270 (442)
122 KOG0998|consensus 80.4 1.3 2.9E-05 46.3 2.9 138 53-205 123-346 (847)
123 PLN02952 phosphoinositide phos 79.7 6.4 0.00014 39.5 7.2 85 112-205 15-111 (599)
124 KOG3555|consensus 78.9 3.7 8E-05 37.8 4.8 63 57-125 248-310 (434)
125 PF08726 EFhand_Ca_insen: Ca2+ 78.3 1.6 3.4E-05 30.6 1.8 56 59-122 6-66 (69)
126 KOG0042|consensus 78.0 2.5 5.4E-05 41.5 3.7 64 135-206 596-659 (680)
127 PF09069 EF-hand_3: EF-hand; 74.7 29 0.00064 25.6 7.8 63 59-126 3-76 (90)
128 PF08726 EFhand_Ca_insen: Ca2+ 71.5 0.98 2.1E-05 31.6 -0.6 55 131-201 5-66 (69)
129 PF05517 p25-alpha: p25-alpha 70.2 16 0.00034 29.9 6.1 61 138-206 8-71 (154)
130 PRK09430 djlA Dna-J like membr 68.4 41 0.0009 30.2 9.0 101 72-177 68-175 (267)
131 KOG1265|consensus 67.9 78 0.0017 33.3 11.4 125 69-206 158-301 (1189)
132 PF09069 EF-hand_3: EF-hand; 66.8 22 0.00048 26.2 5.7 73 11-87 2-75 (90)
133 KOG4347|consensus 66.0 5.6 0.00012 39.7 3.1 52 135-187 558-609 (671)
134 PLN02952 phosphoinositide phos 61.6 46 0.001 33.6 8.6 85 72-159 13-109 (599)
135 KOG0998|consensus 59.6 5 0.00011 42.2 1.6 72 52-127 276-347 (847)
136 PF09068 EF-hand_2: EF hand; 59.3 48 0.001 26.1 6.8 80 57-160 39-125 (127)
137 PF08976 DUF1880: Domain of un 57.2 9.6 0.00021 29.4 2.4 32 92-125 4-35 (118)
138 KOG4347|consensus 57.1 15 0.00032 36.8 4.2 76 76-154 535-612 (671)
139 KOG1264|consensus 49.7 61 0.0013 33.7 7.2 142 59-206 144-295 (1267)
140 PF11116 DUF2624: Protein of u 47.5 1.1E+02 0.0024 22.4 7.3 33 147-179 13-45 (85)
141 PF08976 DUF1880: Domain of un 47.2 15 0.00033 28.4 2.0 33 165-205 4-36 (118)
142 KOG3449|consensus 44.7 1.2E+02 0.0025 23.3 6.3 54 62-122 4-57 (112)
143 cd07313 terB_like_2 tellurium 43.0 27 0.00059 26.0 3.0 81 73-157 13-97 (104)
144 PF07879 PHB_acc_N: PHB/PHA ac 43.0 45 0.00097 22.9 3.6 39 139-177 10-58 (64)
145 PF00404 Dockerin_1: Dockerin 42.7 40 0.00086 17.7 2.6 16 142-157 1-16 (21)
146 cd07313 terB_like_2 tellurium 39.9 1.1E+02 0.0023 22.7 5.9 53 145-205 12-66 (104)
147 PTZ00373 60S Acidic ribosomal 35.7 1.8E+02 0.0038 22.5 6.3 53 62-121 6-58 (112)
148 KOG2871|consensus 35.6 51 0.0011 30.9 3.9 64 57-122 307-371 (449)
149 TIGR01848 PHA_reg_PhaR polyhyd 35.4 2E+02 0.0044 21.9 7.6 48 139-186 10-67 (107)
150 PF14513 DAG_kinase_N: Diacylg 32.9 1.3E+02 0.0028 24.1 5.4 32 147-178 47-79 (138)
151 COG4103 Uncharacterized protei 32.6 99 0.0021 24.9 4.6 90 64-159 35-128 (148)
152 KOG2871|consensus 31.8 36 0.00077 31.9 2.3 56 132-187 309-365 (449)
153 PF07308 DUF1456: Protein of u 31.3 1.4E+02 0.003 20.7 4.7 31 149-179 14-44 (68)
154 KOG1954|consensus 29.0 1E+02 0.0022 29.3 4.7 58 60-122 445-502 (532)
155 cd05833 Ribosomal_P2 Ribosomal 28.0 2.8E+02 0.006 21.3 6.3 57 63-126 5-61 (109)
156 TIGR01639 P_fal_TIGR01639 Plas 27.9 1.3E+02 0.0028 20.3 4.1 31 147-177 8-38 (61)
157 PF03672 UPF0154: Uncharacteri 27.8 1.3E+02 0.0029 20.6 4.0 32 73-104 29-60 (64)
158 PF07308 DUF1456: Protein of u 26.8 2E+02 0.0044 19.9 4.9 25 80-104 18-42 (68)
159 PF01023 S_100: S-100/ICaBP ty 25.8 1.7E+02 0.0036 18.3 4.0 30 58-87 5-36 (44)
160 PF12174 RST: RCD1-SRO-TAF4 (R 25.4 54 0.0012 23.0 1.8 51 146-207 6-56 (70)
161 PF05872 DUF853: Bacterial pro 25.4 1.9E+02 0.0042 28.3 6.0 96 52-159 121-226 (502)
162 TIGR01639 P_fal_TIGR01639 Plas 25.0 1.6E+02 0.0034 19.9 4.0 32 73-104 7-38 (61)
163 PF08461 HTH_12: Ribonuclease 25.0 1.1E+02 0.0024 20.9 3.4 37 145-181 10-46 (66)
164 PRK00523 hypothetical protein; 24.3 1.6E+02 0.0035 20.7 4.0 32 73-104 37-68 (72)
165 PLN02222 phosphoinositide phos 24.1 2.7E+02 0.0059 28.1 7.1 63 59-125 25-90 (581)
166 PF08461 HTH_12: Ribonuclease 23.7 1.3E+02 0.0027 20.7 3.4 37 72-108 10-46 (66)
167 PF14513 DAG_kinase_N: Diacylg 23.6 1.6E+02 0.0035 23.6 4.5 35 72-106 45-80 (138)
168 PF05099 TerB: Tellurite resis 22.8 40 0.00087 26.5 0.9 78 72-153 36-117 (140)
169 PF03979 Sigma70_r1_1: Sigma-7 22.4 83 0.0018 22.5 2.4 33 146-180 19-51 (82)
170 PLN02228 Phosphoinositide phos 22.1 3.6E+02 0.0079 27.1 7.5 65 58-126 23-93 (567)
171 PLN02222 phosphoinositide phos 22.0 1.1E+02 0.0024 30.8 4.0 64 132-205 25-91 (581)
172 PF08414 NADPH_Ox: Respiratory 21.9 3.5E+02 0.0077 20.4 6.2 61 59-126 30-93 (100)
173 KOG3449|consensus 21.7 1.6E+02 0.0036 22.5 3.9 42 136-177 5-46 (112)
174 PF03672 UPF0154: Uncharacteri 21.3 2.4E+02 0.0052 19.4 4.3 32 146-177 29-60 (64)
175 PF12174 RST: RCD1-SRO-TAF4 (R 20.7 1.2E+02 0.0026 21.2 2.8 13 147-159 40-52 (70)
176 PF06319 DUF1052: Protein of u 20.4 51 0.0011 26.9 1.0 25 288-314 83-109 (157)
177 COG3763 Uncharacterized protei 20.1 2.7E+02 0.0058 19.5 4.3 33 145-177 35-67 (71)
No 1
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.90 E-value=6.4e-23 Score=166.63 Aligned_cols=147 Identities=39% Similarity=0.625 Sum_probs=136.6
Q ss_pred HhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 48 MLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 48 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.....++.+++++|+++|..+|++++|.|+..+|..+|+.+|..+++.++..++..+|. |. +.|+|.+|+..|....
T Consensus 9 ~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~--~~idf~~Fl~~ms~~~ 85 (160)
T COG5126 9 LTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GN--ETVDFPEFLTVMSVKL 85 (160)
T ss_pred hhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CC--CccCHHHHHHHHHHHh
Confidence 34456899999999999999999999999999999999999999999999999999999 88 9999999999998876
Q ss_pred ccC--CCcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 128 DFG--SGGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 128 ~~~--~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
... .+++..+|+.||.|++|+|+..||..+|+.+|..+++++++.+++.+|.|++|.|+| ++|+..+...
T Consensus 86 ~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~--------~eF~~~~~~~ 157 (160)
T COG5126 86 KRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDY--------EEFKKLIKDS 157 (160)
T ss_pred ccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeH--------HHHHHHHhcc
Confidence 433 467899999999999999999999999999999999999999999999999999999 9999987653
No 2
>KOG0027|consensus
Probab=99.89 E-value=2.7e-22 Score=165.28 Aligned_cols=142 Identities=44% Similarity=0.690 Sum_probs=132.2
Q ss_pred CChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCC-
Q psy9152 53 SPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGS- 131 (324)
Q Consensus 53 ~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~- 131 (324)
++...+..++.+|..+|++++|+|+..||..+++.+|..++..++..++..+|.+++ |.|++.+|+.++........
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~--g~I~~~eF~~l~~~~~~~~~~ 79 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGD--GTIDFEEFLDLMEKLGEEKTD 79 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCC--CeEcHHHHHHHHHhhhccccc
Confidence 456678999999999999999999999999999999999999999999999999999 99999999999987654322
Q ss_pred -----CcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 132 -----GGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 132 -----~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
+.++.+|+.+|.|++|+||..||+.+|..+|.+.+.+++..+++.+|.|+||.|+| ++|+.++..
T Consensus 80 ~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f--------~ef~~~m~~ 149 (151)
T KOG0027|consen 80 EEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNF--------EEFVKMMSG 149 (151)
T ss_pred ccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeH--------HHHHHHHhc
Confidence 26799999999999999999999999999999999999999999999999999999 999999864
No 3
>KOG0028|consensus
Probab=99.82 E-value=2.5e-19 Score=142.48 Aligned_cols=144 Identities=35% Similarity=0.464 Sum_probs=133.7
Q ss_pred cCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhcc-
Q psy9152 51 SNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDF- 129 (324)
Q Consensus 51 ~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~- 129 (324)
..+++++.+.++..|..||.+++|+|+.+||+.+++++|..+...++..++..+|.+|. |.|+|++|+..+......
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~--g~i~fe~f~~~mt~k~~e~ 102 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGS--GKITFEDFRRVMTVKLGER 102 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccC--ceechHHHHHHHHHHHhcc
Confidence 34666777999999999999999999999999999999999999999999999999999 999999999998776533
Q ss_pred -CCCcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 130 -GSGGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 130 -~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
+.+.++.+|+.+|.|++|.||+.+|+.+.+.+|.+++++++.+++..+|.+++|.|+- +||+..|..
T Consensus 103 dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevne--------eEF~~imk~ 170 (172)
T KOG0028|consen 103 DTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNE--------EEFIRIMKK 170 (172)
T ss_pred CcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccH--------HHHHHHHhc
Confidence 3567889999999999999999999999999999999999999999999999999999 999998865
No 4
>PTZ00183 centrin; Provisional
Probab=99.80 E-value=1.2e-18 Score=144.12 Aligned_cols=144 Identities=34% Similarity=0.486 Sum_probs=130.5
Q ss_pred cCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhcc-
Q psy9152 51 SNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDF- 129 (324)
Q Consensus 51 ~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~- 129 (324)
..+++.++.++..+|..+|.+++|.|+..||..+|..++..++...+..++..+|.+++ |.|+|.||+..+......
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~--g~i~~~eF~~~~~~~~~~~ 86 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGS--GKIDFEEFLDIMTKKLGER 86 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC--CcEeHHHHHHHHHHHhcCC
Confidence 45777888999999999999999999999999999999988899999999999999999 999999999987664321
Q ss_pred -CCCcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 130 -GSGGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 130 -~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
....+..+|+.+|.+++|.|+..||..++..+|..++..++..++..+|.+++|.|++ ++|+.++..
T Consensus 87 ~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~--------~ef~~~~~~ 154 (158)
T PTZ00183 87 DPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISE--------EEFYRIMKK 154 (158)
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcH--------HHHHHHHhc
Confidence 1235678899999999999999999999999999999999999999999999999999 999998875
No 5
>KOG0037|consensus
Probab=99.80 E-value=1.1e-18 Score=146.07 Aligned_cols=161 Identities=24% Similarity=0.378 Sum_probs=142.2
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCcchh
Q psy9152 58 IVEFKEAFRLFDKDGDGSITKEELGRVMRSLG-QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGGWWF 136 (324)
Q Consensus 58 ~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~-~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~~~~ 136 (324)
-..+...|+..|++++|.|+.+||..+|.... ...+.+.|+.|+..+|.+.+ |+|.+.||..++..+ ..|+.
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~--G~i~f~EF~~Lw~~i-----~~Wr~ 128 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNS--GTIGFKEFKALWKYI-----NQWRN 128 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCC--CccCHHHHHHHHHHH-----HHHHH
Confidence 35788999999999999999999999998654 56888999999999999999 999999999999987 68999
Q ss_pred hhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCCCCccchhHH
Q psy9152 137 KSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGATTEEKTADQ 216 (324)
Q Consensus 137 ~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~~~~~~~~~~ 216 (324)
+|+.+|+|++|.|+..||+.+|..+|..++++..+.|++++|.-+.|.|.| ++|+.++....
T Consensus 129 vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~F--------D~FI~ccv~L~---------- 190 (221)
T KOG0037|consen 129 VFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDF--------DDFIQCCVVLQ---------- 190 (221)
T ss_pred HHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeH--------HHHHHHHHHHH----------
Confidence 999999999999999999999999999999999999999999888999999 99999987643
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHhhhhhHHHHHHHHhccCCCCccccchhhHHHH
Q psy9152 217 EEKELRDAFREVEDIADEVSDCVRNTGELREFIVLREIDSGGRLVVVRFDRFVFR 271 (324)
Q Consensus 217 ~~~~l~~aF~~~d~~~~el~~~l~~~~~~~~~~~~~d~D~dg~~~~i~~~EF~~~ 271 (324)
.+.++|+. .|.+-+|.+ .|+|++|+..
T Consensus 191 ---~lt~~Fr~------------------------~D~~q~G~i-~~~y~dfl~~ 217 (221)
T KOG0037|consen 191 ---RLTEAFRR------------------------RDTAQQGSI-TISYDDFLQM 217 (221)
T ss_pred ---HHHHHHHH------------------------hccccceeE-EEeHHHHHHH
Confidence 24444443 466777888 8899988864
No 6
>PTZ00184 calmodulin; Provisional
Probab=99.80 E-value=1.1e-18 Score=142.65 Aligned_cols=143 Identities=45% Similarity=0.696 Sum_probs=128.9
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccC-
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFG- 130 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~- 130 (324)
.++.+++..++..|..+|.+++|.|+..||..++..++..++...+..++..+|.+++ |.|+|++|+..+.......
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~--g~i~~~ef~~~l~~~~~~~~ 81 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN--GTIDFPEFLTLMARKMKDTD 81 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCC--CcCcHHHHHHHHHHhccCCc
Confidence 4667788999999999999999999999999999999988889999999999999999 9999999999887653221
Q ss_pred -CCcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 131 -SGGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 131 -~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
...+..+|+.+|.+++|.|+.+|+..++..+|..++..++..++..+|.+++|.|++ .||+.++..
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~--------~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY--------EEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcH--------HHHHHHHhc
Confidence 235678999999999999999999999999999999999999999999999999999 999988753
No 7
>KOG4223|consensus
Probab=99.72 E-value=5.4e-17 Score=143.42 Aligned_cols=213 Identities=21% Similarity=0.251 Sum_probs=162.0
Q ss_pred ChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccC---
Q psy9152 54 PVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFG--- 130 (324)
Q Consensus 54 ~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~--- 130 (324)
..+...++..++..+|.+++|.|+..|+..|+..........++.+-+..+|.|.+ |.|+|+|+...+.......
T Consensus 72 ~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~D--g~i~~eey~~~~~~~~~~~~~~ 149 (325)
T KOG4223|consen 72 PEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKD--GFITWEEYLPQTYGRVDLPDEF 149 (325)
T ss_pred cchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc--ceeeHHHhhhhhhhcccCcccc
Confidence 33456889999999999999999999999999876666666778888999999999 9999999999877532100
Q ss_pred ------------CCcchhhhhccCCCCCCCcCHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHH
Q psy9152 131 ------------SGGWWFKSKSGHKNYRGYISASDLRAVLQCL-GEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEE 197 (324)
Q Consensus 131 ------------~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~-g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~E 197 (324)
.......|+..|.|++|.++++||..+|..- ...+.+-.|.+-+...|.|+||+|++ +|
T Consensus 150 ~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~--------eE 221 (325)
T KOG4223|consen 150 PDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISL--------EE 221 (325)
T ss_pred ccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeH--------HH
Confidence 0123567999999999999999999999743 45677888999999999999999999 99
Q ss_pred HHHHHHhcCCCCccchhHHhHHHHHHHHHHHhh----hHHHHHHHHhhhh------hHHHHHHHHhccCCCCccccchhh
Q psy9152 198 FVEIVYNMGATTEEKTADQEEKELRDAFREVED----IADEVSDCVRNTG------ELREFIVLREIDSGGRLVVVRFDR 267 (324)
Q Consensus 198 F~~~l~~~~~~~~~~~~~~~~~~l~~aF~~~d~----~~~el~~~l~~~~------~~~~~~~~~d~D~dg~~~~i~~~E 267 (324)
|+.-|........+..-.....+.-..|+..++ ..+|+..++.+.+ +..+++...|.|+||++ |++|
T Consensus 222 figd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kL---s~eE 298 (325)
T KOG4223|consen 222 FIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKL---SKEE 298 (325)
T ss_pred HHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccc---cHHH
Confidence 999999876533222222222232223333333 7889999998865 45565555566666666 9999
Q ss_pred HHHHHHHHHHHh
Q psy9152 268 FVFRFGRFVVFR 279 (324)
Q Consensus 268 F~~~~~~~~~~~ 279 (324)
.+.+|.-||...
T Consensus 299 Il~~~d~FvgSq 310 (325)
T KOG4223|consen 299 ILEHYDVFVGSQ 310 (325)
T ss_pred HhhCcceeeeee
Confidence 999999988543
No 8
>KOG0031|consensus
Probab=99.71 E-value=3.3e-16 Score=123.84 Aligned_cols=141 Identities=30% Similarity=0.455 Sum_probs=128.7
Q ss_pred hcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhcc
Q psy9152 50 YSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDF 129 (324)
Q Consensus 50 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~ 129 (324)
...++..++++++++|..+|.|+||.|+.++|+.++.++|...+++++..++... . |.|+|--|+.++...+..
T Consensus 23 Famf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~--gPINft~FLTmfGekL~g 96 (171)
T KOG0031|consen 23 FAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----P--GPINFTVFLTMFGEKLNG 96 (171)
T ss_pred HHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----C--CCeeHHHHHHHHHHHhcC
Confidence 3446778899999999999999999999999999999999999999999999765 4 999999999999887754
Q ss_pred C--CCcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 130 G--SGGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 130 ~--~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
. .+.+..+|+.||.+++|.|..+.|+++|...|..+++++|+.+++.+-.+..|.++| ..|+..+..
T Consensus 97 tdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy--------~~~~~~ith 165 (171)
T KOG0031|consen 97 TDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDY--------KAFTYIITH 165 (171)
T ss_pred CCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeH--------HHHHHHHHc
Confidence 4 345688999999999999999999999999999999999999999999999999999 999999873
No 9
>KOG0030|consensus
Probab=99.68 E-value=5.2e-16 Score=120.71 Aligned_cols=140 Identities=30% Similarity=0.435 Sum_probs=123.3
Q ss_pred CChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccC--CCCCcceeHHHHHHHHHhhhccC
Q psy9152 53 SPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDIN--GKKAGNYSIMNHCGAVVNALDFG 130 (324)
Q Consensus 53 ~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d--~d~~g~Is~~EF~~~~~~~~~~~ 130 (324)
.+++...+++++|..||..+||+|+..+...+|+.+|.++++.++.+.+..++.+ +- .+|+|++|+.++.......
T Consensus 5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~--~rl~FE~fLpm~q~vaknk 82 (152)
T KOG0030|consen 5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNV--KRLDFEEFLPMYQQVAKNK 82 (152)
T ss_pred cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhh--hhhhHHHHHHHHHHHHhcc
Confidence 4566779999999999999999999999999999999999999999999988877 44 7899999999998876443
Q ss_pred C----CcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHH
Q psy9152 131 S----GGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVY 203 (324)
Q Consensus 131 ~----~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~ 203 (324)
. +..-+-.+.||++|+|.|...||+++|..+|..+++++++.++.-. .|++|.|.| +.|++.+.
T Consensus 83 ~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~Y--------E~fVk~i~ 150 (152)
T KOG0030|consen 83 DQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINY--------EAFVKHIM 150 (152)
T ss_pred ccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcH--------HHHHHHHh
Confidence 2 2234567999999999999999999999999999999999999877 677888999 99998764
No 10
>KOG0027|consensus
Probab=99.68 E-value=5.9e-16 Score=127.47 Aligned_cols=131 Identities=36% Similarity=0.564 Sum_probs=110.4
Q ss_pred CcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCCCCcc
Q psy9152 132 GGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGATTEE 211 (324)
Q Consensus 132 ~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~~~~~ 211 (324)
..++.+|+.+|.+++|+|+..||..+|+.+|..++..++..++..+|.+++|.|++ .||+.++.........
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~--------~eF~~l~~~~~~~~~~ 79 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDF--------EEFLDLMEKLGEEKTD 79 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcH--------HHHHHHHHhhhccccc
Confidence 35678999999999999999999999999999999999999999999999999999 9999999976542211
Q ss_pred chhHHhHHHHHHHHHHHhh------hHHHHHHHHhhhhh---HHHH-HHHHhccCCCCccccchhhHHHHHH
Q psy9152 212 KTADQEEKELRDAFREVED------IADEVSDCVRNTGE---LREF-IVLREIDSGGRLVVVRFDRFVFRFG 273 (324)
Q Consensus 212 ~~~~~~~~~l~~aF~~~d~------~~~el~~~l~~~~~---~~~~-~~~~d~D~dg~~~~i~~~EF~~~~~ 273 (324)
.. ...+++++||+.||+ ++.||..+++.+++ ...+ .++..+|.||+| .|+|+||+..+.
T Consensus 80 ~~--~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg-~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 80 EE--ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDG-KVNFEEFVKMMS 148 (151)
T ss_pred cc--ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCC-eEeHHHHHHHHh
Confidence 11 356789999999999 89999999998883 1122 466777778888 789999998764
No 11
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.67 E-value=7.9e-16 Score=125.26 Aligned_cols=121 Identities=36% Similarity=0.544 Sum_probs=80.4
Q ss_pred CCCCCHhhHHHHHHHHhhhccCCCchhHH-HHHHhh---ccCchH---------------------HHHHHhhcCCChhH
Q psy9152 3 YSNSPVFSIVEFKEAFRLFDKDGDGVQAR-HFRQFF---SFNNSF---------------------YTTTMLYSNSPVFL 57 (324)
Q Consensus 3 ~~~~~~~~~~~~~~~F~~~D~dgdG~I~~-e~~~~~---~~~~~~---------------------~~~~~~~~~~~~~~ 57 (324)
-+..+..++++++++|.++|+|++|.|++ +|...+ +++.+. +...+-........
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~~~~~idf~~Fl~~ms~~~~~~~~ 90 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDAGNETVDFPEFLTVMSVKLKRGDK 90 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccCCCCccCHHHHHHHHHHHhccCCc
Confidence 35678899999999999999999999994 666665 333321 11111111123334
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 58 IVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 58 ~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
.++|+.+|+.||+|++|+|+..+|+.+|+.+|..+++++++.++..+|.+++ |.|+|++|+..+..
T Consensus 91 ~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~d--G~i~~~eF~~~~~~ 156 (160)
T COG5126 91 EEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGD--GEIDYEEFKKLIKD 156 (160)
T ss_pred HHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCC--ceEeHHHHHHHHhc
Confidence 5666677777777777777777777777777777777777777777777777 77777777666543
No 12
>KOG0036|consensus
Probab=99.58 E-value=3.5e-14 Score=128.99 Aligned_cols=140 Identities=19% Similarity=0.258 Sum_probs=128.5
Q ss_pred CChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCC
Q psy9152 53 SPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQF-AREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGS 131 (324)
Q Consensus 53 ~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~-~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~ 131 (324)
..++...+++.+|+.+|.+++|.++..++.+.+..+..+ ........++...|.|.+ |.|+|+||...+... .
T Consensus 8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~d--g~vDy~eF~~Y~~~~----E 81 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRD--GRVDYSEFKRYLDNK----E 81 (463)
T ss_pred CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcC--CcccHHHHHHHHHHh----H
Confidence 455667889999999999999999999999999998876 777888999999999999 999999999999876 3
Q ss_pred CcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 132 GGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 132 ~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
.++...|+.+|.++||.|+.+|+.+.|+.+|.+++++++..+++..|.++++.|++ +||...+....
T Consensus 82 ~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~--------~e~rd~~ll~p 148 (463)
T KOG0036|consen 82 LELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDL--------EEWRDHLLLYP 148 (463)
T ss_pred HHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeecc--------HHHHhhhhcCC
Confidence 67889999999999999999999999999999999999999999999999999999 99988877543
No 13
>KOG0034|consensus
Probab=99.57 E-value=3.1e-14 Score=119.86 Aligned_cols=140 Identities=26% Similarity=0.428 Sum_probs=116.1
Q ss_pred CCChhHHHHHHHHHHhhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcc-eeHHHHHHHHHhhhcc
Q psy9152 52 NSPVFLIVEFKEAFRLFDKD-GDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGN-YSIMNHCGAVVNALDF 129 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d-~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~-Is~~EF~~~~~~~~~~ 129 (324)
.++..++..|...|..+|.+ ++|.|+.+||..+... .. .....+++..++.+++ |. |+|++|+..+......
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~-~~---Np~~~rI~~~f~~~~~--~~~v~F~~Fv~~ls~f~~~ 99 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPEL-AL---NPLADRIIDRFDTDGN--GDPVDFEEFVRLLSVFSPK 99 (187)
T ss_pred ccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHH-hc---CcHHHHHHHHHhccCC--CCccCHHHHHHHHhhhcCC
Confidence 47888999999999999999 9999999999998833 22 2345677888888888 77 9999999999887654
Q ss_pred CC--CcchhhhhccCCCCCCCcCHHHHHHHHHHh-CCCCC--HH----HHHHHHHHhCCCCCCceeeccCCCCCHHHHHH
Q psy9152 130 GS--GGWWFKSKSGHKNYRGYISASDLRAVLQCL-GEDLS--EE----EIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVE 200 (324)
Q Consensus 130 ~~--~~~~~~F~~~D~d~~G~Is~~El~~~L~~~-g~~~~--~~----~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~ 200 (324)
.. ..++-+|+.||.+++|+|+.+|+.+++..+ |...+ ++ .++.++..+|.++||.|+| +||.+
T Consensus 100 ~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~Isf--------eEf~~ 171 (187)
T KOG0034|consen 100 ASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISF--------EEFCK 171 (187)
T ss_pred ccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcH--------HHHHH
Confidence 42 256779999999999999999999999975 44444 33 3567889999999999999 99999
Q ss_pred HHHhc
Q psy9152 201 IVYNM 205 (324)
Q Consensus 201 ~l~~~ 205 (324)
.+...
T Consensus 172 ~v~~~ 176 (187)
T KOG0034|consen 172 VVEKQ 176 (187)
T ss_pred HHHcC
Confidence 98875
No 14
>KOG0037|consensus
Probab=99.57 E-value=1.5e-14 Score=121.45 Aligned_cols=121 Identities=21% Similarity=0.364 Sum_probs=93.3
Q ss_pred CCHhhHHHHHHHHhhhccCCCchhH-HHHHHhhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHH
Q psy9152 6 SPVFSIVEFKEAFRLFDKDGDGVQA-RHFRQFFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRV 84 (324)
Q Consensus 6 ~~~~~~~~~~~~F~~~D~dgdG~I~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~ 84 (324)
-+++.++.|+.+..+||.+.+|.|. +||+.+|+. +..++.+|+.+|+|++|.|+..||+.+
T Consensus 88 ~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~------------------i~~Wr~vF~~~D~D~SG~I~~sEL~~A 149 (221)
T KOG0037|consen 88 WSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY------------------INQWRNVFRTYDRDRSGTIDSSELRQA 149 (221)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH------------------HHHHHHHHHhcccCCCCcccHHHHHHH
Confidence 3456666667777777777777766 566666653 578888888888888888888888888
Q ss_pred HHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCcchhhhhccCCCCCCCcCH
Q psy9152 85 MRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGGWWFKSKSGHKNYRGYISA 151 (324)
Q Consensus 85 L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~ 151 (324)
|..+|..++.+..+.+++++|.-+. |.|.|++|+.++..+ ..+.++|+..|++..|.|+.
T Consensus 150 l~~~Gy~Lspq~~~~lv~kyd~~~~--g~i~FD~FI~ccv~L-----~~lt~~Fr~~D~~q~G~i~~ 209 (221)
T KOG0037|consen 150 LTQLGYRLSPQFYNLLVRKYDRFGG--GRIDFDDFIQCCVVL-----QRLTEAFRRRDTAQQGSITI 209 (221)
T ss_pred HHHcCcCCCHHHHHHHHHHhccccC--CceeHHHHHHHHHHH-----HHHHHHHHHhccccceeEEE
Confidence 8888888888888888888887767 888888888888776 35567788888877776653
No 15
>KOG4223|consensus
Probab=99.54 E-value=3.8e-14 Score=125.49 Aligned_cols=184 Identities=22% Similarity=0.302 Sum_probs=141.5
Q ss_pred hhHHHHHHHHhhhccCCCchhH-HHHHHhhccCch-------------------------HHHHHHhhc-----------
Q psy9152 9 FSIVEFKEAFRLFDKDGDGVQA-RHFRQFFSFNNS-------------------------FYTTTMLYS----------- 51 (324)
Q Consensus 9 ~~~~~~~~~F~~~D~dgdG~I~-~e~~~~~~~~~~-------------------------~~~~~~~~~----------- 51 (324)
.+.+.+..++..+|.++||+|+ .|++.|+..... .+.......
T Consensus 74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence 4567799999999999999999 577777753331 111111110
Q ss_pred --CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhc
Q psy9152 52 --NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLG-QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALD 128 (324)
Q Consensus 52 --~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~-~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~ 128 (324)
..-...+.+-.+.|+..|.|++|.++.+||..+|..-- ..+..-.+..-+...|+|+| |.|+++||+.-+.....
T Consensus 154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~D--G~I~~eEfigd~~~~~~ 231 (325)
T KOG4223|consen 154 DNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGD--GKISLEEFIGDLYSHEG 231 (325)
T ss_pred hcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCC--CceeHHHHHhHHhhccC
Confidence 01112356677899999999999999999999996543 33556667888899999999 99999999999887654
Q ss_pred cCCCc-c-----hhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHH
Q psy9152 129 FGSGG-W-----WFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIV 202 (324)
Q Consensus 129 ~~~~~-~-----~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l 202 (324)
.+.+. | ...+...|+|++|+++.+|+..++..-+......++..|+...|.|+||+|++ +|.+.-.
T Consensus 232 ~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~--------eEIl~~~ 303 (325)
T KOG4223|consen 232 NEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSK--------EEILEHY 303 (325)
T ss_pred CCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccH--------HHHhhCc
Confidence 33222 1 34578889999999999999999887777788899999999999999999999 9877543
No 16
>PTZ00183 centrin; Provisional
Probab=99.54 E-value=1.4e-13 Score=113.64 Aligned_cols=144 Identities=22% Similarity=0.244 Sum_probs=116.6
Q ss_pred CCCCCHhhHHHHHHHHhhhccCCCchhH-HHHHHhhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHH
Q psy9152 3 YSNSPVFSIVEFKEAFRLFDKDGDGVQA-RHFRQFFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEEL 81 (324)
Q Consensus 3 ~~~~~~~~~~~~~~~F~~~D~dgdG~I~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~ 81 (324)
+...++.++++++.+|..+|.+++|+|+ .+|..++...+ ...+ ...+..+|..+|.+++|.|+..||
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g---------~~~~---~~~~~~l~~~~d~~~~g~i~~~eF 75 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLG---------FEPK---KEEIKQMIADVDKDGSGKIDFEEF 75 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC---------CCCC---HHHHHHHHHHhCCCCCCcEeHHHH
Confidence 4567889999999999999999999999 56777665221 1122 246788999999999999999999
Q ss_pred HHHHHHh-CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhc-cCCCcchhhhhccCCCCCCCcCHHHHHHHHH
Q psy9152 82 GRVMRSL-GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALD-FGSGGWWFKSKSGHKNYRGYISASDLRAVLQ 159 (324)
Q Consensus 82 ~~~L~~l-~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~Is~~El~~~L~ 159 (324)
..++... ........+..+|..+|.+++ |.|+..||...+..... .....+..+|..+|.+++|.|+.+||..++.
T Consensus 76 ~~~~~~~~~~~~~~~~l~~~F~~~D~~~~--G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 76 LDIMTKKLGERDPREEILKAFRLFDDDKT--GKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHhCCCCC--CcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 9987654 345667889999999999999 99999999999876422 2234567889999999999999999999886
Q ss_pred H
Q psy9152 160 C 160 (324)
Q Consensus 160 ~ 160 (324)
.
T Consensus 154 ~ 154 (158)
T PTZ00183 154 K 154 (158)
T ss_pred c
Confidence 4
No 17
>KOG0031|consensus
Probab=99.51 E-value=2e-13 Score=108.20 Aligned_cols=117 Identities=26% Similarity=0.394 Sum_probs=97.2
Q ss_pred CCHhhHHHHHHHHhhhccCCCchhHH-HHHHhhccCch---------------------HHHHHHhhcCCChhHHHHHHH
Q psy9152 6 SPVFSIVEFKEAFRLFDKDGDGVQAR-HFRQFFSFNNS---------------------FYTTTMLYSNSPVFLIVEFKE 63 (324)
Q Consensus 6 ~~~~~~~~~~~~F~~~D~dgdG~I~~-e~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~ 63 (324)
..+.||++++++|+++|.|+||.|++ +|+..+.+.+. .++...-......+..+.+..
T Consensus 26 f~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtdpe~~I~~ 105 (171)
T KOG0031|consen 26 FDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTDPEEVILN 105 (171)
T ss_pred hhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCCHHHHHHH
Confidence 45688999999999999999999996 47776654431 122222333334455688999
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHH
Q psy9152 64 AFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVV 124 (324)
Q Consensus 64 ~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~ 124 (324)
+|+.||.+++|.|..+.|+.+|...|.+++.+++..+++.+-.+.. |.++|.+|+..+.
T Consensus 106 AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~--G~~dy~~~~~~it 164 (171)
T KOG0031|consen 106 AFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKK--GNFDYKAFTYIIT 164 (171)
T ss_pred HHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccC--CceeHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988888 9999999999886
No 18
>PTZ00184 calmodulin; Provisional
Probab=99.51 E-value=3.4e-13 Score=110.04 Aligned_cols=144 Identities=24% Similarity=0.296 Sum_probs=115.5
Q ss_pred CCCCCCHhhHHHHHHHHhhhccCCCchhH-HHHHHhhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHH
Q psy9152 2 LYSNSPVFSIVEFKEAFRLFDKDGDGVQA-RHFRQFFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEE 80 (324)
Q Consensus 2 l~~~~~~~~~~~~~~~F~~~D~dgdG~I~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E 80 (324)
|+.+.++.++++++..|..+|+|++|.|+ .+|..++... ....+ ...+..+|..+|.+++|.|+.++
T Consensus 1 ~~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~---------~~~~~---~~~~~~~~~~~d~~~~g~i~~~e 68 (149)
T PTZ00184 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPT---EAELQDMINEVDADGNGTIDFPE 68 (149)
T ss_pred CCCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh---------CCCCC---HHHHHHHHHhcCcCCCCcCcHHH
Confidence 46678899999999999999999999999 5677655321 11111 25678899999999999999999
Q ss_pred HHHHHHHh-CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhc-cCCCcchhhhhccCCCCCCCcCHHHHHHHH
Q psy9152 81 LGRVMRSL-GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALD-FGSGGWWFKSKSGHKNYRGYISASDLRAVL 158 (324)
Q Consensus 81 ~~~~L~~l-~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~Is~~El~~~L 158 (324)
|..++... ........+..+|..+|.+++ |.|+..+|...+..... .....+..+|..+|.+++|.|+..||..++
T Consensus 69 f~~~l~~~~~~~~~~~~~~~~F~~~D~~~~--g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 69 FLTLMARKMKDTDSEEEIKEAFKVFDRDGN--GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146 (149)
T ss_pred HHHHHHHhccCCcHHHHHHHHHHhhCCCCC--CeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHH
Confidence 99988764 333456678999999999999 99999999998876422 123456778999999999999999999877
Q ss_pred H
Q psy9152 159 Q 159 (324)
Q Consensus 159 ~ 159 (324)
.
T Consensus 147 ~ 147 (149)
T PTZ00184 147 M 147 (149)
T ss_pred h
Confidence 4
No 19
>KOG0044|consensus
Probab=99.49 E-value=6.1e-13 Score=112.09 Aligned_cols=142 Identities=18% Similarity=0.249 Sum_probs=111.7
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccC
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQ-FAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFG 130 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~-~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~ 130 (324)
.+++.++..+.+-|.. ...+|.++.++|+.++..... .-+..-...+|+.+|.|++ |.|+|.||+..+....+..
T Consensus 22 ~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~d--g~i~F~Efi~als~~~rGt 97 (193)
T KOG0044|consen 22 KFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKD--GTIDFLEFICALSLTSRGT 97 (193)
T ss_pred CCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCC--CCcCHHHHHHHHHHHcCCc
Confidence 3455555555444444 235899999999999999875 4455668889999999999 9999999999988876544
Q ss_pred -CCcchhhhhccCCCCCCCcCHHHHHHHHHHh----CC-------CCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHH
Q psy9152 131 -SGGWWFKSKSGHKNYRGYISASDLRAVLQCL----GE-------DLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEF 198 (324)
Q Consensus 131 -~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~----g~-------~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF 198 (324)
.+.+.-+|+.||.||+|+|+..|+..++..+ |. .-..+-+..+|+.+|.|+||.|++ +||
T Consensus 98 ~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~--------eef 169 (193)
T KOG0044|consen 98 LEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTL--------EEF 169 (193)
T ss_pred HHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccH--------HHH
Confidence 3445567999999999999999999988753 32 123455889999999999999999 999
Q ss_pred HHHHHhc
Q psy9152 199 VEIVYNM 205 (324)
Q Consensus 199 ~~~l~~~ 205 (324)
+......
T Consensus 170 ~~~~~~d 176 (193)
T KOG0044|consen 170 IEGCKAD 176 (193)
T ss_pred HHHhhhC
Confidence 9988754
No 20
>KOG0028|consensus
Probab=99.39 E-value=3.1e-12 Score=102.21 Aligned_cols=125 Identities=24% Similarity=0.384 Sum_probs=106.2
Q ss_pred CcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCCCCcc
Q psy9152 132 GGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGATTEE 211 (324)
Q Consensus 132 ~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~~~~~ 211 (324)
..++.+|..||.+++|+|+.+||+.+++.+|.....+++..++..+|.++.|.|+| ++|+..+.....
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~f--------e~f~~~mt~k~~---- 100 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITF--------EDFRRVMTVKLG---- 100 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceech--------HHHHHHHHHHHh----
Confidence 45678899999999999999999999999999999999999999999999999999 999999887654
Q ss_pred chhHHhHHHHHHHHHHHhh------hHHHHHHHHhhhhh------HHHHHHHHhccCCCCccccchhhHHHHHH
Q psy9152 212 KTADQEEKELRDAFREVED------IADEVSDCVRNTGE------LREFIVLREIDSGGRLVVVRFDRFVFRFG 273 (324)
Q Consensus 212 ~~~~~~~~~l~~aF~~~d~------~~~el~~~l~~~~~------~~~~~~~~d~D~dg~~~~i~~~EF~~~~~ 273 (324)
.....++++.||+.+|. +..+|..+...+++ +.+ ++.++|.||+| -|.-+||+..+.
T Consensus 101 --e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~e--MIeEAd~d~dg-evneeEF~~imk 169 (172)
T KOG0028|consen 101 --ERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELME--MIEEADRDGDG-EVNEEEFIRIMK 169 (172)
T ss_pred --ccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHH--HHHHhcccccc-cccHHHHHHHHh
Confidence 23367899999999887 67788888777764 443 77788888888 889999987653
No 21
>KOG0030|consensus
Probab=99.31 E-value=2.6e-11 Score=94.67 Aligned_cols=115 Identities=29% Similarity=0.416 Sum_probs=91.5
Q ss_pred CHhhHHHHHHHHhhhccCCCchhH----HHHHHhhccCchHHH--------------------------HHHhhcCCChh
Q psy9152 7 PVFSIVEFKEAFRLFDKDGDGVQA----RHFRQFFSFNNSFYT--------------------------TTMLYSNSPVF 56 (324)
Q Consensus 7 ~~~~~~~~~~~F~~~D~dgdG~I~----~e~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 56 (324)
++.+..+++++|.+||..|||.|+ -+..+.++.+++... ...++++....
T Consensus 6 ~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~ 85 (152)
T KOG0030|consen 6 TPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQG 85 (152)
T ss_pred CcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccC
Confidence 556779999999999999999998 245556666663221 23334444444
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHH
Q psy9152 57 LIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVV 124 (324)
Q Consensus 57 ~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~ 124 (324)
..+.+-+-.+.||++++|.|...||+.+|..+|..+++.++..++... .|.+ |.|.|+.|+..+.
T Consensus 86 t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~n--G~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 86 TYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSN--GCINYEAFVKHIM 150 (152)
T ss_pred cHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccC--CcCcHHHHHHHHh
Confidence 556777788999999999999999999999999999999999999876 5666 9999999998764
No 22
>KOG2643|consensus
Probab=99.20 E-value=9.3e-11 Score=107.57 Aligned_cols=193 Identities=19% Similarity=0.216 Sum_probs=131.7
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHh------CC----CCC-----HHHHHH--HHHHhccCCCCCcceeHHHHHH
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSL------GQ----FAR-----EEELQQ--MLEEVDINGKKAGNYSIMNHCG 121 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l------~~----~~~-----~~e~~~--l~~~~D~d~d~~g~Is~~EF~~ 121 (324)
..++-+|++||.|+||.|+.+||..+..-. +. .++ ..++.. ...-+..+++ +++++++|..
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~--~kLs~deF~~ 310 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGN--GKLSIDEFLK 310 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCC--ccccHHHHHH
Confidence 567789999999999999999998876432 11 011 112221 2334678899 9999999999
Q ss_pred HHHhhhccCCCcchhhhhccCCCCCCCcCHHHHHHHHHHhC-CCCCH--HHHHHHHHHhCCCCCCceeeccCCCCCHHHH
Q psy9152 122 AVVNALDFGSGGWWFKSKSGHKNYRGYISASDLRAVLQCLG-EDLSE--EEIEDMIKEVDVDGDGRIDFNGDGYFSFEEF 198 (324)
Q Consensus 122 ~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g-~~~~~--~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF 198 (324)
++..+. .+-+.-.|..+|+..+|.|+..+|..+|.... .+... ..+..+-+.++.. +-.|++ +||
T Consensus 311 F~e~Lq---~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl--------~Ef 378 (489)
T KOG2643|consen 311 FQENLQ---EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISL--------QEF 378 (489)
T ss_pred HHHHHH---HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCH--------HHH
Confidence 998875 23345569999999999999999999987543 33222 2356677777655 456888 999
Q ss_pred HHHHHhcCCCCccchhHHhHHHHHHHHHHHhh-----hHHHHHHHHhhhh-------hHHHHHHHHhccCCCCccccchh
Q psy9152 199 VEIVYNMGATTEEKTADQEEKELRDAFREVED-----IADEVSDCVRNTG-------ELREFIVLREIDSGGRLVVVRFD 266 (324)
Q Consensus 199 ~~~l~~~~~~~~~~~~~~~~~~l~~aF~~~d~-----~~~el~~~l~~~~-------~~~~~~~~~d~D~dg~~~~i~~~ 266 (324)
..+..-... ..++..|.+.|-. +..+++.+..-.- .++.++.++|.|.||.+ +.+
T Consensus 379 ~~Ff~Fl~~----------l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~L---S~~ 445 (489)
T KOG2643|consen 379 KAFFRFLNN----------LNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTL---SHK 445 (489)
T ss_pred HHHHHHHhh----------hhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcc---cHH
Confidence 988876542 3455666666555 4556655532211 22233556666666666 999
Q ss_pred hHHHHHHHHHHH
Q psy9152 267 RFVFRFGRFVVF 278 (324)
Q Consensus 267 EF~~~~~~~~~~ 278 (324)
||+....+++-.
T Consensus 446 EFl~Vmk~Rmhr 457 (489)
T KOG2643|consen 446 EFLAVMKRRMHR 457 (489)
T ss_pred HHHHHHHHHhhc
Confidence 999999887743
No 23
>PLN02964 phosphatidylserine decarboxylase
Probab=99.14 E-value=3.9e-10 Score=111.17 Aligned_cols=117 Identities=21% Similarity=0.230 Sum_probs=97.8
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhC-CCCCHHH---HHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLG-QFAREEE---LQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~-~~~~~~e---~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.+...++++++++|..+|+|++|.+ +..+++.+| ..+++.+ ++.++..+|.+++ |.|+++||+.++....
T Consensus 136 ~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~Dgd--G~IdfdEFl~lL~~lg 209 (644)
T PLN02964 136 DFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDED--GQLSFSEFSDLIKAFG 209 (644)
T ss_pred hccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCC--CeEcHHHHHHHHHHhc
Confidence 4666788999999999999999997 888999999 5788877 8999999999999 9999999999998653
Q ss_pred c-cCCCcchhhhhccCCCCCCCcCHHHHHHHHHH-------------hCCCCCH-HHHHHHH
Q psy9152 128 D-FGSGGWWFKSKSGHKNYRGYISASDLRAVLQC-------------LGEDLSE-EEIEDMI 174 (324)
Q Consensus 128 ~-~~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~-------------~g~~~~~-~~~~~l~ 174 (324)
. ...+.+..+|+.+|.|++|+|+.+||..+|.. +|..++. +++..|+
T Consensus 210 ~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~ii 271 (644)
T PLN02964 210 NLVAANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALGVSDKLNAMI 271 (644)
T ss_pred cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcccCcchhhhchhhcCcccchhhHHHHH
Confidence 2 22345789999999999999999999999987 5655655 4455444
No 24
>KOG2643|consensus
Probab=99.11 E-value=1.3e-10 Score=106.74 Aligned_cols=183 Identities=16% Similarity=0.245 Sum_probs=116.2
Q ss_pred HHHHHHHhhhccCCCchhHH-HHHHhhccCch-----------------H-------HHHHHhhc----CCChh------
Q psy9152 12 VEFKEAFRLFDKDGDGVQAR-HFRQFFSFNNS-----------------F-------YTTTMLYS----NSPVF------ 56 (324)
Q Consensus 12 ~~~~~~F~~~D~dgdG~I~~-e~~~~~~~~~~-----------------~-------~~~~~~~~----~~~~~------ 56 (324)
.-++-+|.+||.||||-|++ ||........+ . ........ .++-+
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 34778899999999999995 56654421100 0 00000000 11111
Q ss_pred ---HHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCH---HHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccC
Q psy9152 57 ---LIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFARE---EELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFG 130 (324)
Q Consensus 57 ---~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~---~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~ 130 (324)
+.+.+..-|..+|+..+|.|+..+|..+|-.......+ ..++++-+.++.+ + ..||++||.+++.-..+.+
T Consensus 313 e~Lq~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~--~gISl~Ef~~Ff~Fl~~l~ 389 (489)
T KOG2643|consen 313 ENLQEEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-G--KGISLQEFKAFFRFLNNLN 389 (489)
T ss_pred HHHHHHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-C--CCcCHHHHHHHHHHHhhhh
Confidence 23344556777787777888888887776554321111 2344455555443 3 5688888887776654322
Q ss_pred CCcchhhhhccCCCCCCCcCHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCCC
Q psy9152 131 SGGWWFKSKSGHKNYRGYISASDLRAVLQ-CLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGAT 208 (324)
Q Consensus 131 ~~~~~~~F~~~D~d~~G~Is~~El~~~L~-~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~~ 208 (324)
.-...-.|-. ..++.|+..+|+++.. ..|.++++..++.+|..||.|+||.|+. +||+..|......
T Consensus 390 dfd~Al~fy~---~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~--------~EFl~Vmk~Rmhr 457 (489)
T KOG2643|consen 390 DFDIALRFYH---MAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSH--------KEFLAVMKRRMHR 457 (489)
T ss_pred HHHHHHHHHH---HcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccH--------HHHHHHHHHHhhc
Confidence 2112222222 2467899999999887 4689999999999999999999999999 9999999976543
No 25
>KOG0044|consensus
Probab=99.11 E-value=1.7e-09 Score=91.37 Aligned_cols=121 Identities=20% Similarity=0.212 Sum_probs=94.7
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCc--chhhhhccCCCCCCCcCHH
Q psy9152 75 SITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGG--WWFKSKSGHKNYRGYISAS 152 (324)
Q Consensus 75 ~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~--~~~~F~~~D~d~~G~Is~~ 152 (324)
.+..+.+..+... ...+..+++.+++.+-. .-|+|.++-++|..++....+.+... ...+|+.+|.|++|.|+..
T Consensus 8 ~~~~~~~e~l~~~--t~f~~~ei~~~Yr~Fk~-~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~ 84 (193)
T KOG0044|consen 8 KLQPESLEQLVQQ--TKFSKKEIQQWYRGFKN-ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFL 84 (193)
T ss_pred cCCcHHHHHHHHh--cCCCHHHHHHHHHHhcc-cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHH
Confidence 3444444444432 46788899999888844 44679999999999998876533222 3678999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 153 DLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 153 El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
||..+|..+......+.+.-.|+.+|.|++|.|++ +|++.++....
T Consensus 85 Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~--------~Eml~iv~~i~ 130 (193)
T KOG0044|consen 85 EFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITK--------EEMLKIVQAIY 130 (193)
T ss_pred HHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcH--------HHHHHHHHHHH
Confidence 99999987665567777888999999999999999 99999887654
No 26
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.09 E-value=3.9e-10 Score=83.70 Aligned_cols=69 Identities=17% Similarity=0.297 Sum_probs=63.5
Q ss_pred HHHHHHHHHHhhCC-CCCCcccHHHHHHHHHH-hCCCCCH-HHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 57 LIVEFKEAFRLFDK-DGDGSITKEELGRVMRS-LGQFARE-EELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 57 ~~~~l~~~F~~~D~-d~dG~Is~~E~~~~L~~-l~~~~~~-~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.+..+..+|+.||+ +++|+|+..||+.+|+. +|..++. .++..+++.+|.|++ |.|+|+||+.++..+.
T Consensus 6 ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~D--G~I~F~EF~~l~~~l~ 77 (89)
T cd05022 6 AIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQD--SKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCC--CCCcHHHHHHHHHHHH
Confidence 46788999999999 99999999999999999 8877887 999999999999999 9999999999987653
No 27
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.09 E-value=4.6e-10 Score=78.74 Aligned_cols=62 Identities=44% Similarity=0.722 Sum_probs=54.4
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHH----HHHHHHHhccCCCCCcceeHHHHHHHH
Q psy9152 60 EFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEE----LQQMLEEVDINGKKAGNYSIMNHCGAV 123 (324)
Q Consensus 60 ~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e----~~~l~~~~D~d~d~~g~Is~~EF~~~~ 123 (324)
+|+.+|+.+|+|++|+|+.+||..++..++...+... +..+++.+|.|++ |.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~d--G~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGD--GRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSS--SSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCc--CCCcHHHHhccC
Confidence 4789999999999999999999999999987665544 5555999999999 999999999864
No 28
>KOG4251|consensus
Probab=99.08 E-value=7.3e-10 Score=94.54 Aligned_cols=202 Identities=16% Similarity=0.236 Sum_probs=131.9
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHHHHh-C--CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCC--
Q psy9152 57 LIVEFKEAFRLFDKDGDGSITKEELGRVMRSL-G--QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGS-- 131 (324)
Q Consensus 57 ~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l-~--~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~-- 131 (324)
..+.+..+|...|.|.+|+|+..|++.++..- . ..-...+.+..|+..|+||+ |.|+|+||...+........
T Consensus 99 srrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgD--GhvsWdEykvkFlaskghseke 176 (362)
T KOG4251|consen 99 SRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGD--GHVSWDEYKVKFLASKGHSEKE 176 (362)
T ss_pred HHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCC--CceehhhhhhHHHhhcCcchHH
Confidence 45788999999999999999999999987542 1 11223445567888999999 99999999887765432211
Q ss_pred --------C-----cchhhhhccCCCCCCCcC---------HHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCceeec
Q psy9152 132 --------G-----GWWFKSKSGHKNYRGYIS---------ASDLRAVLQC-LGEDLSEEEIEDMIKEVDVDGDGRIDFN 188 (324)
Q Consensus 132 --------~-----~~~~~F~~~D~d~~G~Is---------~~El~~~L~~-~g~~~~~~~~~~l~~~~D~~~dG~I~~~ 188 (324)
+ .-.+.|..-+++..|..+ ..||..+|.. .....-...+..|+..+|.|+|..++.
T Consensus 177 vadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSv- 255 (362)
T KOG4251|consen 177 VADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSV- 255 (362)
T ss_pred HHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecc-
Confidence 1 112334444455555444 4888888862 233355667899999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCCCcc-chhHHhHHHHHHHHHH-Hhh------hHHHHHHHHhhhh------hHHHHHHHHhc
Q psy9152 189 GDGYFSFEEFVEIVYNMGATTEE-KTADQEEKELRDAFRE-VED------IADEVSDCVRNTG------ELREFIVLREI 254 (324)
Q Consensus 189 ~~g~~~~~EF~~~l~~~~~~~~~-~~~~~~~~~l~~aF~~-~d~------~~~el~~~l~~~~------~~~~~~~~~d~ 254 (324)
.||+......-....- .-......+-.+.|.. .|. +++||..++.+.+ +...+++..+.
T Consensus 256 -------peFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ma~~d~ 328 (362)
T KOG4251|consen 256 -------PEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIMALTDA 328 (362)
T ss_pred -------hhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHHhhhcc
Confidence 9999765432211111 1111222333344443 232 8899999987765 34444555555
Q ss_pred cCCCCccccchhhHHHH
Q psy9152 255 DSGGRLVVVRFDRFVFR 271 (324)
Q Consensus 255 D~dg~~~~i~~~EF~~~ 271 (324)
+.|.++ +.+|.+.+
T Consensus 329 n~~~~L---s~eell~r 342 (362)
T KOG4251|consen 329 NNDEKL---SLEELLER 342 (362)
T ss_pred CCCccc---CHHHHHHH
Confidence 555555 99998875
No 29
>KOG0377|consensus
Probab=99.08 E-value=1.6e-09 Score=99.51 Aligned_cols=135 Identities=19% Similarity=0.302 Sum_probs=105.3
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh----------
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSL-GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL---------- 127 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l-~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~---------- 127 (324)
..|...|+.+|.+++|+|+...+..++... |..++..-+..-+ ...+.+ |.|.|.+....+..-.
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kl--a~~s~d--~~v~Y~~~~~~l~~e~~~~ea~~slv 539 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKL--ANGSDD--GKVEYKSTLDNLDTEVILEEAGSSLV 539 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhc--cCCCcC--cceehHhHHHHhhhhhHHHHHHhHHH
Confidence 567889999999999999999999999873 5666654443322 233444 8999998776543211
Q ss_pred ---ccCCCcchhhhhccCCCCCCCcCHHHHHHHHHHh----CCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHH
Q psy9152 128 ---DFGSGGWWFKSKSGHKNYRGYISASDLRAVLQCL----GEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVE 200 (324)
Q Consensus 128 ---~~~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~----g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~ 200 (324)
-.....+..+|+.+|.|++|.||.+||..+++-+ ...++++++.++.+.+|.|+||.|++ +||+.
T Consensus 540 etLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDl--------NEfLe 611 (631)
T KOG0377|consen 540 ETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDL--------NEFLE 611 (631)
T ss_pred HHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccH--------HHHHH
Confidence 1123456778999999999999999999998744 46789999999999999999999999 99997
Q ss_pred HHHhc
Q psy9152 201 IVYNM 205 (324)
Q Consensus 201 ~l~~~ 205 (324)
++.-.
T Consensus 612 AFrlv 616 (631)
T KOG0377|consen 612 AFRLV 616 (631)
T ss_pred HHhhh
Confidence 77643
No 30
>KOG0034|consensus
Probab=99.05 E-value=3.7e-09 Score=89.14 Aligned_cols=137 Identities=19% Similarity=0.223 Sum_probs=108.8
Q ss_pred CCHhhHHHHHHHHhhhccC-CCchhHH-HHHHhhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCc-ccHHHHH
Q psy9152 6 SPVFSIVEFKEAFRLFDKD-GDGVQAR-HFRQFFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGS-ITKEELG 82 (324)
Q Consensus 6 ~~~~~~~~~~~~F~~~D~d-gdG~I~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~-Is~~E~~ 82 (324)
.+..++..+-..|..+|++ ++|++++ +|....... . + --..+++..++.+++|. |+.++|.
T Consensus 27 fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~----------~--N----p~~~rI~~~f~~~~~~~~v~F~~Fv 90 (187)
T KOG0034|consen 27 FSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELA----------L--N----PLADRIIDRFDTDGNGDPVDFEEFV 90 (187)
T ss_pred cCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHh----------c--C----cHHHHHHHHHhccCCCCccCHHHHH
Confidence 5677888999999999999 9999995 465543211 0 0 12346778888888888 9999999
Q ss_pred HHHHHhCCCCCHH-HHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCC---c-----chhhhhccCCCCCCCcCHHH
Q psy9152 83 RVMRSLGQFAREE-ELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSG---G-----WWFKSKSGHKNYRGYISASD 153 (324)
Q Consensus 83 ~~L~~l~~~~~~~-e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~---~-----~~~~F~~~D~d~~G~Is~~E 153 (324)
..+.......+.. .++-.|+.||.+++ |.|+.+|+...+......+.. . ....|..+|.|++|.|+.+|
T Consensus 91 ~~ls~f~~~~~~~~Kl~faF~vYD~~~~--G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeE 168 (187)
T KOG0034|consen 91 RLLSVFSPKASKREKLRFAFRVYDLDGD--GFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEE 168 (187)
T ss_pred HHHhhhcCCccHHHHHHHHHHHhcCCCC--CcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence 9998876655555 88889999999999 999999999999887654322 1 24579999999999999999
Q ss_pred HHHHHHH
Q psy9152 154 LRAVLQC 160 (324)
Q Consensus 154 l~~~L~~ 160 (324)
|..++..
T Consensus 169 f~~~v~~ 175 (187)
T KOG0034|consen 169 FCKVVEK 175 (187)
T ss_pred HHHHHHc
Confidence 9999864
No 31
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.03 E-value=3.1e-10 Score=84.26 Aligned_cols=66 Identities=24% Similarity=0.396 Sum_probs=60.9
Q ss_pred cchhhhhccCC-CCCCCcCHHHHHHHHHH-hCCCCCH-HHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 133 GWWFKSKSGHK-NYRGYISASDLRAVLQC-LGEDLSE-EEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 133 ~~~~~F~~~D~-d~~G~Is~~El~~~L~~-~g~~~~~-~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
.+..+|+.||. +++|+|+..||+.+|.. +|..++. .++..+++.+|.|+||.|+| +||+.++....
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F--------~EF~~l~~~l~ 77 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSF--------EEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcH--------HHHHHHHHHHH
Confidence 45788999999 99999999999999998 8988888 99999999999999999999 99999988754
No 32
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.02 E-value=4e-10 Score=79.07 Aligned_cols=61 Identities=43% Similarity=0.702 Sum_probs=53.3
Q ss_pred chhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHH----HHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHH
Q psy9152 134 WWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEE----EIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIV 202 (324)
Q Consensus 134 ~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~----~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l 202 (324)
++.+|+.+|.|++|+|+.+||..++..++...+.. .+..+++.+|.|++|.|++ +||+.++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~--------~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISF--------DEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEH--------HHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcH--------HHHhccC
Confidence 46789999999999999999999999998666554 4555699999999999999 9999875
No 33
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.98 E-value=3.3e-09 Score=78.79 Aligned_cols=68 Identities=21% Similarity=0.471 Sum_probs=62.7
Q ss_pred HHHHHHHHHHhhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 57 LIVEFKEAFRLFD-KDGDG-SITKEELGRVMRS-----LGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 57 ~~~~l~~~F~~~D-~d~dG-~Is~~E~~~~L~~-----l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
.+..+..+|+.+| ++++| .|+..||+.+|+. ++..+++.++..+++.+|.|++ |.|+|+||+.++...
T Consensus 6 ~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~d--G~v~f~eF~~li~~~ 80 (88)
T cd05027 6 AMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGD--GECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCC--CcCcHHHHHHHHHHH
Confidence 4678999999998 79999 6999999999999 8888999999999999999999 999999999988764
No 34
>KOG0036|consensus
Probab=98.93 E-value=8.6e-09 Score=94.28 Aligned_cols=150 Identities=13% Similarity=0.148 Sum_probs=95.1
Q ss_pred CCHhhHHHHHHHHhhhccCCCchhH-HHHHHhhccCc----h-HHHH----------------HHhhcCCChhHHHHHHH
Q psy9152 6 SPVFSIVEFKEAFRLFDKDGDGVQA-RHFRQFFSFNN----S-FYTT----------------TMLYSNSPVFLIVEFKE 63 (324)
Q Consensus 6 ~~~~~~~~~~~~F~~~D~dgdG~I~-~e~~~~~~~~~----~-~~~~----------------~~~~~~~~~~~~~~l~~ 63 (324)
..++...+++.+|+.+|.+++|+|+ .++...+.... . .... ..... .-.+...++..
T Consensus 8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~-Y~~~~E~~l~~ 86 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKR-YLDNKELELYR 86 (463)
T ss_pred CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHH-HHHHhHHHHHH
Confidence 4556667799999999999999998 45543332211 0 0000 00000 01123456777
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCc---chhhhhc
Q psy9152 64 AFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGG---WWFKSKS 140 (324)
Q Consensus 64 ~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~---~~~~F~~ 140 (324)
+|+.+|.++||.|+..|+...|+.+|..++.+++..+++..|.+++ +.|+++||..++.-.....-.. .|..+..
T Consensus 87 ~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~--~~I~~~e~rd~~ll~p~s~i~di~~~W~h~~~ 164 (463)
T KOG0036|consen 87 IFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGK--ATIDLEEWRDHLLLYPESDLEDIYDFWRHVLL 164 (463)
T ss_pred HHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCC--eeeccHHHHhhhhcCChhHHHHHHHhhhhheE
Confidence 7888888888888888888888888888888888888888888888 8888888877766543111111 1444566
Q ss_pred cCCCCCCCcCHHHHHHHHH
Q psy9152 141 GHKNYRGYISASDLRAVLQ 159 (324)
Q Consensus 141 ~D~d~~G~Is~~El~~~L~ 159 (324)
+|...+..|. +++...-.
T Consensus 165 idigE~~~iP-dg~s~~e~ 182 (463)
T KOG0036|consen 165 IDIGEDAVLP-DGDSKLEN 182 (463)
T ss_pred EEccccccCC-cchHHHHh
Confidence 7777777777 44443333
No 35
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.90 E-value=3.6e-09 Score=78.60 Aligned_cols=66 Identities=23% Similarity=0.349 Sum_probs=60.1
Q ss_pred cchhhhhccC-CCCCC-CcCHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 133 GWWFKSKSGH-KNYRG-YISASDLRAVLQC-----LGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 133 ~~~~~F~~~D-~d~~G-~Is~~El~~~L~~-----~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.+..+|+.|| ++|+| .|+..||+.+|+. +|...++.++..+++.+|.|++|.|+| +||+.++...
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f--------~eF~~li~~~ 80 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDF--------QEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcH--------HHHHHHHHHH
Confidence 4578999998 79999 5999999999998 888899999999999999999999999 9999988765
Q ss_pred C
Q psy9152 206 G 206 (324)
Q Consensus 206 ~ 206 (324)
.
T Consensus 81 ~ 81 (88)
T cd05027 81 T 81 (88)
T ss_pred H
Confidence 3
No 36
>PLN02964 phosphatidylserine decarboxylase
Probab=98.87 E-value=2.3e-08 Score=98.86 Aligned_cols=107 Identities=15% Similarity=0.220 Sum_probs=88.2
Q ss_pred CCHhhHHHHHHHHhhhccCCCchhHHHHHHhhccCchHHHHHHhh-cCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHH
Q psy9152 6 SPVFSIVEFKEAFRLFDKDGDGVQARHFRQFFSFNNSFYTTTMLY-SNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRV 84 (324)
Q Consensus 6 ~~~~~~~~~~~~F~~~D~dgdG~I~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~ 84 (324)
....++++++++|.++|+|++|.+ +...+.. +. ...+..+...+..+|..+|.+++|.|+.+||..+
T Consensus 137 f~~kqi~elkeaF~lfD~dgdG~i---Lg~ilrs---------lG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~l 204 (644)
T PLN02964 137 FVTQEPESACESFDLLDPSSSNKV---VGSIFVS---------CSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDL 204 (644)
T ss_pred ccHHHHHHHHHHHHHHCCCCCCcC---HHHHHHH---------hCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 456788999999999999999987 2222221 11 1234444456899999999999999999999999
Q ss_pred HHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 85 MRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 85 L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
+..++...+++++..+|+.+|.|++ |.|+++||...+...
T Consensus 205 L~~lg~~~seEEL~eaFk~fDkDgd--G~Is~dEL~~vL~~~ 244 (644)
T PLN02964 205 IKAFGNLVAANKKEELFKAADLNGD--GVVTIDELAALLALQ 244 (644)
T ss_pred HHHhccCCCHHHHHHHHHHhCCCCC--CcCCHHHHHHHHHhc
Confidence 9998888899999999999999999 999999999988774
No 37
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.87 E-value=1.4e-08 Score=76.90 Aligned_cols=71 Identities=18% Similarity=0.245 Sum_probs=64.7
Q ss_pred CChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 53 SPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 53 ~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
++.+++..++.+|..+|++++|.|+.+|+..+|+.++ ++..++..++..+|.+++ |.|+|+||+.++....
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~--g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDND--GELDKDEFALAMHLIY 74 (96)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999865 688999999999999999 9999999999887653
No 38
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.83 E-value=2.2e-08 Score=74.34 Aligned_cols=69 Identities=16% Similarity=0.329 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhhCC-CC-CCcccHHHHHHHHH---HhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 57 LIVEFKEAFRLFDK-DG-DGSITKEELGRVMR---SLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 57 ~~~~l~~~F~~~D~-d~-dG~Is~~E~~~~L~---~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.+..+-.+|+.||. ++ +|+|+.+||+.+|+ .+|..++.+++..+++.+|.|++ |.|+|+||+..+..+.
T Consensus 8 ~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~d--G~Idf~EFv~lm~~l~ 81 (88)
T cd05029 8 AIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKD--QEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCC--CCCcHHHHHHHHHHHH
Confidence 45678899999998 66 89999999999997 36888999999999999999999 9999999999887653
No 39
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.82 E-value=2.2e-08 Score=75.21 Aligned_cols=69 Identities=16% Similarity=0.278 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhhC-CCCCC-cccHHHHHHHHHH-h----CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 57 LIVEFKEAFRLFD-KDGDG-SITKEELGRVMRS-L----GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 57 ~~~~l~~~F~~~D-~d~dG-~Is~~E~~~~L~~-l----~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.+..+..+|+.|| +|++| +|+..||+.+|.. + ....+..++..+++.+|.|++ |.|+|+||+.++..+.
T Consensus 8 a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~d--G~Idf~EF~~l~~~l~ 83 (93)
T cd05026 8 AMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKD--NEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCC--CCCCHHHHHHHHHHHH
Confidence 3577888999999 78998 5999999999976 2 334577899999999999999 9999999999987753
No 40
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.81 E-value=2.6e-08 Score=75.11 Aligned_cols=67 Identities=16% Similarity=0.366 Sum_probs=60.1
Q ss_pred HHHHHHHHHhhCC-CC-CCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 58 IVEFKEAFRLFDK-DG-DGSITKEELGRVMRS-----LGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 58 ~~~l~~~F~~~D~-d~-dG~Is~~E~~~~L~~-----l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
...++.+|..+|. ++ +|.|+..||+.+|.. ++..++..++..++..+|.+++ |.|+|+||+.++...
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~d--g~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRD--GKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCC--CcCcHHHHHHHHHHH
Confidence 5778999999997 87 699999999999986 4677899999999999999999 999999999887654
No 41
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.80 E-value=3.1e-08 Score=74.30 Aligned_cols=69 Identities=20% Similarity=0.398 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhhC-CCCCC-cccHHHHHHHHHH-hC----CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 57 LIVEFKEAFRLFD-KDGDG-SITKEELGRVMRS-LG----QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 57 ~~~~l~~~F~~~D-~d~dG-~Is~~E~~~~L~~-l~----~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
-+..++++|+.|| ++++| .|+..||+.+|+. +| ..++..+++.++..+|.+++ |.|+|++|+.++..+.
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~--G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGD--GEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCC--CcCcHHHHHHHHHHHH
Confidence 3477999999997 99999 5999999999985 44 35688999999999999999 9999999999887653
No 42
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.77 E-value=3.5e-08 Score=73.36 Aligned_cols=70 Identities=16% Similarity=0.341 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHhhCC--CCCCcccHHHHHHHHHH-hCCC----CCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 55 VFLIVEFKEAFRLFDK--DGDGSITKEELGRVMRS-LGQF----AREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 55 ~~~~~~l~~~F~~~D~--d~dG~Is~~E~~~~L~~-l~~~----~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
++.+..++.+|..+|+ +++|.|+..||..+++. ++.. ++..++..++..+|.+++ |.|+|++|+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~--g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKD--GKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCC--CcCcHHHHHHHHHHH
Confidence 3467889999999999 89999999999999976 4543 458999999999999999 999999999988765
No 43
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.76 E-value=1.5e-08 Score=75.21 Aligned_cols=65 Identities=18% Similarity=0.389 Sum_probs=58.1
Q ss_pred chhhhhccCC-CC-CCCcCHHHHHHHHH---HhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 134 WWFKSKSGHK-NY-RGYISASDLRAVLQ---CLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 134 ~~~~F~~~D~-d~-~G~Is~~El~~~L~---~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
+..+|..||. +| +|+|+.+||+.+|. .+|.+++++++..+++.+|.|++|+|+| +||+.++....
T Consensus 12 ~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf--------~EFv~lm~~l~ 81 (88)
T cd05029 12 LVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNF--------QEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcH--------HHHHHHHHHHH
Confidence 4567999998 77 89999999999997 3688999999999999999999999999 99999887643
No 44
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.75 E-value=2.3e-08 Score=67.07 Aligned_cols=52 Identities=40% Similarity=0.737 Sum_probs=48.8
Q ss_pred CCCCcCHHHHHHHHHHhCCC-CCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 145 YRGYISASDLRAVLQCLGED-LSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 145 ~~G~Is~~El~~~L~~~g~~-~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
++|.|+.++|+.+|..+|.+ ++++++..++..+|.|++|.|+| +||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~--------~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISF--------DEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEH--------HHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCH--------HHHHHHHHh
Confidence 47999999999999888999 99999999999999999999999 999998864
No 45
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.74 E-value=1.8e-08 Score=75.89 Aligned_cols=66 Identities=20% Similarity=0.424 Sum_probs=58.7
Q ss_pred cchhhhhccCC-CC-CCCcCHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 133 GWWFKSKSGHK-NY-RGYISASDLRAVLQC-----LGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 133 ~~~~~F~~~D~-d~-~G~Is~~El~~~L~~-----~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.++.+|..+|. || +|.|+..||+.+|.. +|..++..++..+++.+|.+++|.|+| +||+.++...
T Consensus 9 ~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f--------~eF~~l~~~~ 80 (94)
T cd05031 9 SLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNF--------EEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcH--------HHHHHHHHHH
Confidence 46789999997 97 699999999999986 466789999999999999999999999 9999988764
Q ss_pred C
Q psy9152 206 G 206 (324)
Q Consensus 206 ~ 206 (324)
.
T Consensus 81 ~ 81 (94)
T cd05031 81 S 81 (94)
T ss_pred H
Confidence 3
No 46
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.73 E-value=4.2e-08 Score=68.64 Aligned_cols=61 Identities=25% Similarity=0.333 Sum_probs=55.8
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 62 KEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 62 ~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
+++|..+|++++|.|+.+|+..++..++. +..++..++..+|.+++ |.|+|.||+..+...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~--g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKD--GKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCC--CcCCHHHHHHHHHHH
Confidence 57899999999999999999999998864 88899999999999999 999999999988654
No 47
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.71 E-value=6.2e-08 Score=65.01 Aligned_cols=52 Identities=33% Similarity=0.520 Sum_probs=48.9
Q ss_pred CCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 72 GDGSITKEELGRVMRSLGQF-AREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 72 ~dG~Is~~E~~~~L~~l~~~-~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
++|.|+.++|+.+|..+|.. +++.++..++..+|.+++ |.|+|.||+..+..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~--G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGD--GYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSS--SSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCC--CCCCHHHHHHHHHh
Confidence 47999999999999888999 999999999999999999 99999999998864
No 48
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.71 E-value=4e-08 Score=68.77 Aligned_cols=61 Identities=26% Similarity=0.286 Sum_probs=55.7
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
+.+|..+|.+++|.|+.+|+..++..+| ++.+++..++..+|.+++|.|++ .||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~--------~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDK--------EEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCH--------HHHHHHHHHH
Confidence 4679999999999999999999999887 48889999999999999999999 9999988754
No 49
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.70 E-value=3.1e-08 Score=74.47 Aligned_cols=66 Identities=21% Similarity=0.313 Sum_probs=56.5
Q ss_pred cchhhhhccC-CCCCC-CcCHHHHHHHHHH-h----CCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 133 GWWFKSKSGH-KNYRG-YISASDLRAVLQC-L----GEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 133 ~~~~~F~~~D-~d~~G-~Is~~El~~~L~~-~----g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.+..+|+.|| .||+| +||..||+.+|.. + +...++.++..+++.+|.|++|.|+| +||+.++...
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf--------~EF~~l~~~l 82 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDF--------NEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHH
Confidence 3467899999 78998 5999999999976 3 33457889999999999999999999 9999998875
Q ss_pred C
Q psy9152 206 G 206 (324)
Q Consensus 206 ~ 206 (324)
.
T Consensus 83 ~ 83 (93)
T cd05026 83 T 83 (93)
T ss_pred H
Confidence 4
No 50
>KOG4251|consensus
Probab=98.69 E-value=8.2e-08 Score=82.16 Aligned_cols=174 Identities=18% Similarity=0.229 Sum_probs=112.7
Q ss_pred hhHHHHHHHHhhhccCCCchhH-HHHHHhhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHH-H
Q psy9152 9 FSIVEFKEAFRLFDKDGDGVQA-RHFRQFFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVM-R 86 (324)
Q Consensus 9 ~~~~~~~~~F~~~D~dgdG~I~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L-~ 86 (324)
...+.+..+|...|.|.||+|+ +|+++|+..+-..- + .+....-...|...|+|++|.|+.+|++--+ .
T Consensus 98 rsrrklmviFsKvDVNtDrkisAkEmqrwImektaEH--------f-qeameeSkthFraVDpdgDGhvsWdEykvkFla 168 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEH--------F-QEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLA 168 (362)
T ss_pred HHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHH--------H-HHHHhhhhhheeeeCCCCCCceehhhhhhHHHh
Confidence 4567799999999999999999 78888875332110 0 0111233456888999999999999986533 2
Q ss_pred HhCCC------------------------------------------CC-----------------HHHHHHHHHHhccC
Q psy9152 87 SLGQF------------------------------------------AR-----------------EEELQQMLEEVDIN 107 (324)
Q Consensus 87 ~l~~~------------------------------------------~~-----------------~~e~~~l~~~~D~d 107 (324)
.-|.. ++ ...++.++..+|.|
T Consensus 169 skghsekevadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqd 248 (362)
T KOG4251|consen 169 SKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQD 248 (362)
T ss_pred hcCcchHHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccC
Confidence 21110 00 11234555666777
Q ss_pred CCCCcceeHHHHHHHHHhhhccCC-Cc--------chhhh-hccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 108 GKKAGNYSIMNHCGAVVNALDFGS-GG--------WWFKS-KSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEV 177 (324)
Q Consensus 108 ~d~~g~Is~~EF~~~~~~~~~~~~-~~--------~~~~F-~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~ 177 (324)
|+ ..+|-.+|+..........+ +. ..+.| ..+|.|.+|.++.+||......+...+.-.++..++..-
T Consensus 249 gD--kqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ma~~ 326 (362)
T KOG4251|consen 249 GD--KQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIMALT 326 (362)
T ss_pred CC--eeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHHhhh
Confidence 77 77777777776433221110 00 11223 567888888888888888876666666677788888888
Q ss_pred CCCCCCceeeccCCCCCHHHHHHH
Q psy9152 178 DVDGDGRIDFNGDGYFSFEEFVEI 201 (324)
Q Consensus 178 D~~~dG~I~~~~~g~~~~~EF~~~ 201 (324)
|.|++.+++. +|.+..
T Consensus 327 d~n~~~~Ls~--------eell~r 342 (362)
T KOG4251|consen 327 DANNDEKLSL--------EELLER 342 (362)
T ss_pred ccCCCcccCH--------HHHHHH
Confidence 8888888888 776643
No 51
>KOG0038|consensus
Probab=98.69 E-value=1.1e-07 Score=75.12 Aligned_cols=140 Identities=22% Similarity=0.300 Sum_probs=98.7
Q ss_pred CChhHHHHHHHHHHhhCCC-----------CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHH
Q psy9152 53 SPVFLIVEFKEAFRLFDKD-----------GDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCG 121 (324)
Q Consensus 53 ~~~~~~~~l~~~F~~~D~d-----------~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~ 121 (324)
++..++-++...|..+.++ ..-++..+.+. -|..+..++-. +++...+..+|. |.++|++|+.
T Consensus 22 FtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~-kMPELkenpfk---~ri~e~FSeDG~--GnlsfddFlD 95 (189)
T KOG0038|consen 22 FTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIE-KMPELKENPFK---RRICEVFSEDGR--GNLSFDDFLD 95 (189)
T ss_pred ccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHh-hChhhhcChHH---HHHHHHhccCCC--CcccHHHHHH
Confidence 4445556666666655432 12234444333 33344444433 344555678899 9999999999
Q ss_pred HHHhhhccCCCc--chhhhhccCCCCCCCcCHHHHHHHHHHhC-CCCCHHHHH----HHHHHhCCCCCCceeeccCCCCC
Q psy9152 122 AVVNALDFGSGG--WWFKSKSGHKNYRGYISASDLRAVLQCLG-EDLSEEEIE----DMIKEVDVDGDGRIDFNGDGYFS 194 (324)
Q Consensus 122 ~~~~~~~~~~~~--~~~~F~~~D~d~~G~Is~~El~~~L~~~g-~~~~~~~~~----~l~~~~D~~~dG~I~~~~~g~~~ 194 (324)
++.......+.. ...+|+.||-|++++|...+|...+..+. ..++++++. .++...|.++||+|++
T Consensus 96 mfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~------- 168 (189)
T KOG0038|consen 96 MFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSF------- 168 (189)
T ss_pred HHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccH-------
Confidence 988776544333 35689999999999999999999999874 468888764 5677899999999999
Q ss_pred HHHHHHHHHhcC
Q psy9152 195 FEEFVEIVYNMG 206 (324)
Q Consensus 195 ~~EF~~~l~~~~ 206 (324)
.||-.++....
T Consensus 169 -~eFe~~i~raP 179 (189)
T KOG0038|consen 169 -AEFEHVILRAP 179 (189)
T ss_pred -HHHHHHHHhCc
Confidence 99998887643
No 52
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.68 E-value=4.5e-08 Score=73.47 Aligned_cols=67 Identities=27% Similarity=0.463 Sum_probs=58.2
Q ss_pred CcchhhhhccC-CCCCC-CcCHHHHHHHHHH-hCC----CCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 132 GGWWFKSKSGH-KNYRG-YISASDLRAVLQC-LGE----DLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 132 ~~~~~~F~~~D-~d~~G-~Is~~El~~~L~~-~g~----~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
..++.+|+.|| .+++| .|+..||+.+|+. +|. .++..++..+++.+|.|++|.|+| ++|+.++..
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f--------~eF~~l~~~ 80 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDF--------QEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcH--------HHHHHHHHH
Confidence 35678999997 99999 4999999999985 543 468899999999999999999999 999998876
Q ss_pred cC
Q psy9152 205 MG 206 (324)
Q Consensus 205 ~~ 206 (324)
..
T Consensus 81 ~~ 82 (92)
T cd05025 81 LT 82 (92)
T ss_pred HH
Confidence 53
No 53
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.64 E-value=1.9e-07 Score=69.44 Aligned_cols=69 Identities=20% Similarity=0.300 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHh-hCCCCCC-cccHHHHHHHHHHh-----CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 56 FLIVEFKEAFRL-FDKDGDG-SITKEELGRVMRSL-----GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 56 ~~~~~l~~~F~~-~D~d~dG-~Is~~E~~~~L~~l-----~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
..+..|..+|+. +|++++| +|+.+||+.++... +....+.++..+++.+|.|++ |.|+|+||+.++..+
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~D--G~I~f~EF~~l~~~l 81 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSD--GQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCC--CcCcHHHHHHHHHHH
Confidence 346788999999 7788876 99999999999875 345667899999999999999 999999999988765
No 54
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.62 E-value=2e-07 Score=63.26 Aligned_cols=61 Identities=44% Similarity=0.767 Sum_probs=57.1
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHH
Q psy9152 61 FKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAV 123 (324)
Q Consensus 61 l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~ 123 (324)
+..+|..+|.+++|.|+..++..++..++...+...+..++..+|.+++ |.|++.+|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGD--GKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC--CeEeHHHHHHHh
Confidence 5678999999999999999999999999999999999999999999999 999999998764
No 55
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.59 E-value=2e-07 Score=63.25 Aligned_cols=61 Identities=54% Similarity=0.795 Sum_probs=56.7
Q ss_pred chhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHH
Q psy9152 134 WWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIV 202 (324)
Q Consensus 134 ~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l 202 (324)
+..+|..+|.+++|.|+..|+..++..++...+...+..++..+|.+++|.|++ ++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDF--------EEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeH--------HHHHHHh
Confidence 456799999999999999999999999999999999999999999999999999 9998765
No 56
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.58 E-value=1.1e-07 Score=71.86 Aligned_cols=63 Identities=22% Similarity=0.323 Sum_probs=57.6
Q ss_pred cchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 133 GWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 133 ~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.+..+|..+|.+++|.|+.+|+..+|+..| ++..++..++..+|.+++|.|+| +||+.++...
T Consensus 11 ~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~--------~eF~~~~~~~ 73 (96)
T smart00027 11 KYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDK--------DEFALAMHLI 73 (96)
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCH--------HHHHHHHHHH
Confidence 457789999999999999999999999876 78899999999999999999999 9999988754
No 57
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.55 E-value=1.6e-07 Score=69.87 Aligned_cols=65 Identities=17% Similarity=0.372 Sum_probs=56.2
Q ss_pred cchhhhhc-cCCCCCC-CcCHHHHHHHHHHh-----CCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 133 GWWFKSKS-GHKNYRG-YISASDLRAVLQCL-----GEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 133 ~~~~~F~~-~D~d~~G-~Is~~El~~~L~~~-----g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.+..+|+. +|.+|+| +||.+||+.++... +...++.++..+++.+|.|+||.|+| +||+.++...
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f--------~EF~~l~~~l 81 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDF--------QEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcH--------HHHHHHHHHH
Confidence 45778988 7788876 99999999999864 34567889999999999999999999 9999988764
No 58
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.54 E-value=1.4e-07 Score=70.11 Aligned_cols=65 Identities=22% Similarity=0.393 Sum_probs=57.1
Q ss_pred cchhhhhccCC--CCCCCcCHHHHHHHHHH-hCCC----CCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 133 GWWFKSKSGHK--NYRGYISASDLRAVLQC-LGED----LSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 133 ~~~~~F~~~D~--d~~G~Is~~El~~~L~~-~g~~----~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.++.+|..+|+ +++|.|+.+||..++.. +|.. .+..++..++..+|.+++|.|+| ++|+.++...
T Consensus 9 ~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f--------~eF~~~~~~~ 80 (88)
T cd00213 9 TIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDF--------QEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcH--------HHHHHHHHHH
Confidence 46778999999 89999999999999985 5544 45899999999999999999999 9999988764
No 59
>KOG0040|consensus
Probab=98.50 E-value=1.1e-06 Score=91.07 Aligned_cols=144 Identities=19% Similarity=0.260 Sum_probs=109.7
Q ss_pred hcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCC-------HHHHHHHHHHhccCCCCCcceeHHHHHHH
Q psy9152 50 YSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAR-------EEELQQMLEEVDINGKKAGNYSIMNHCGA 122 (324)
Q Consensus 50 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~-------~~e~~~l~~~~D~d~d~~g~Is~~EF~~~ 122 (324)
..+.+++.+.++..+|+.||++.+|.++..+|+.+|+.+|..++ +.+++.++..+|++.+ |.|+..+|+++
T Consensus 2244 ~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~--G~Vsl~dY~af 2321 (2399)
T KOG0040|consen 2244 HNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRD--GYVSLQDYMAF 2321 (2399)
T ss_pred cCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCc--CcccHHHHHHH
Confidence 44688899999999999999999999999999999999997652 3489999999999999 99999999999
Q ss_pred HHhhhccC---CCcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHH
Q psy9152 123 VVNALDFG---SGGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFV 199 (324)
Q Consensus 123 ~~~~~~~~---~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~ 199 (324)
|......+ ...+..+|+.+|. +..+|+..++... +|+++++..++.+-+--++.-.-.-++-+.|.+|+
T Consensus 2322 mi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~-------ltreqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv 2393 (2399)
T KOG0040|consen 2322 MISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQN-------LTREQAEFCMSKMKPYAETSSGRSDQVALDYKDFV 2393 (2399)
T ss_pred HHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhc-------CCHHHHHHHHHHhhhhcccccCCCccccccHHHHH
Confidence 98764332 2356778999998 8889999988754 46677776666543322221000112234559998
Q ss_pred HHHH
Q psy9152 200 EIVY 203 (324)
Q Consensus 200 ~~l~ 203 (324)
+.+.
T Consensus 2394 ~sl~ 2397 (2399)
T KOG0040|consen 2394 NSLF 2397 (2399)
T ss_pred HHHh
Confidence 7763
No 60
>KOG2562|consensus
Probab=98.48 E-value=1.4e-06 Score=81.21 Aligned_cols=175 Identities=14% Similarity=0.183 Sum_probs=117.9
Q ss_pred HHHHHHhhhccCCCchhH-HHHHH-----hhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q psy9152 13 EFKEAFRLFDKDGDGVQA-RHFRQ-----FFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMR 86 (324)
Q Consensus 13 ~~~~~F~~~D~dgdG~I~-~e~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~ 86 (324)
.+..+|=.+++.+.|.|+ ++++. .+......-.......-++-+.-..+.-.|-.+|+|++|.|+.++|...-.
T Consensus 226 vi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d 305 (493)
T KOG2562|consen 226 VIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGD 305 (493)
T ss_pred HhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhc
Confidence 366888899999999988 44322 111000000000111112233333444457889999999999999976543
Q ss_pred HhCCCCCHHHHHHHHHH----hccCCCCCcceeHHHHHHHHHhhhccC-CCcchhhhhccCCCCCCCcCHHHHHHHHHH-
Q psy9152 87 SLGQFAREEELQQMLEE----VDINGKKAGNYSIMNHCGAVVNALDFG-SGGWWFKSKSGHKNYRGYISASDLRAVLQC- 160 (324)
Q Consensus 87 ~l~~~~~~~e~~~l~~~----~D~d~d~~g~Is~~EF~~~~~~~~~~~-~~~~~~~F~~~D~d~~G~Is~~El~~~L~~- 160 (324)
..++...++++|.. .-.-.+ |+++|++|+-++....... ...+.-.|+.+|.+++|.|+..|++-+-..
T Consensus 306 ---~tlt~~ivdRIFs~v~r~~~~~~e--GrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq 380 (493)
T KOG2562|consen 306 ---HTLTERIVDRIFSQVPRGFTVKVE--GRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQ 380 (493)
T ss_pred ---cchhhHHHHHHHhhccccceeeec--CcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHHHHHHH
Confidence 34567778889983 234466 9999999999998876443 556788999999999999999998765542
Q ss_pred ------hC-CCCC-HHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHH
Q psy9152 161 ------LG-EDLS-EEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVE 200 (324)
Q Consensus 161 ------~g-~~~~-~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~ 200 (324)
+| ..++ ...+.+++..+-....++|+. ++|+.
T Consensus 381 ~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItL--------qDlk~ 420 (493)
T KOG2562|consen 381 LQRMECMGQEALPFEDALCQIRDMVKPEDENKITL--------QDLKG 420 (493)
T ss_pred HHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeH--------HHHhh
Confidence 23 2233 344567777777777889999 99987
No 61
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.43 E-value=1.1e-06 Score=68.60 Aligned_cols=64 Identities=19% Similarity=0.270 Sum_probs=55.8
Q ss_pred ChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHH
Q psy9152 54 PVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAV 123 (324)
Q Consensus 54 ~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~ 123 (324)
.+.....+..+|..+|.|+||.|+.+||..+. ....+..+..++..+|.|++ |.||++||...+
T Consensus 43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~D--g~IS~~Ef~~cl 106 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKD--GSISLDEWCYCF 106 (116)
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCC--CCCCHHHHHHHH
Confidence 34556788999999999999999999999876 33457778899999999999 999999999998
No 62
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.37 E-value=1.6e-06 Score=64.34 Aligned_cols=69 Identities=17% Similarity=0.345 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhhCCC--CCCcccHHHHHHHHH-HhCCCCC----HHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 57 LIVEFKEAFRLFDKD--GDGSITKEELGRVMR-SLGQFAR----EEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 57 ~~~~l~~~F~~~D~d--~dG~Is~~E~~~~L~-~l~~~~~----~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.+..+...|+.++.. ++|.|+..||+.+|. .++..++ ..++..++..+|.+++ |.|+|+||+.++....
T Consensus 6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~d--G~I~f~eF~~~~~~~~ 81 (88)
T cd05030 6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQD--GQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCC--CcCcHHHHHHHHHHHH
Confidence 457788899999865 479999999999997 5565565 8999999999999999 9999999999887653
No 63
>PF14658 EF-hand_9: EF-hand domain
Probab=98.35 E-value=1.7e-06 Score=59.62 Aligned_cols=61 Identities=26% Similarity=0.483 Sum_probs=57.2
Q ss_pred hhhhccCCCCCCCcCHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCC-CceeeccCCCCCHHHHHHHHHh
Q psy9152 136 FKSKSGHKNYRGYISASDLRAVLQCLGE-DLSEEEIEDMIKEVDVDGD-GRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 136 ~~F~~~D~d~~G~Is~~El~~~L~~~g~-~~~~~~~~~l~~~~D~~~d-G~I~~~~~g~~~~~EF~~~l~~ 204 (324)
.+|..+|.++.|.|....+..+|+.++. ..++.+++.+.+.+|+++. |.|++ +.|+..|+.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~--------d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNF--------DTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeH--------HHHHHHHHH
Confidence 4699999999999999999999999987 8999999999999999987 99999 999999875
No 64
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.31 E-value=1.1e-06 Score=68.62 Aligned_cols=59 Identities=24% Similarity=0.338 Sum_probs=51.0
Q ss_pred cchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHH
Q psy9152 133 GWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVY 203 (324)
Q Consensus 133 ~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~ 203 (324)
.+..+|..+|.|++|.|+.+||..+. ++ .....+..++..+|.|+||.|++ +||..++.
T Consensus 49 ~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~--~~e~~~~~f~~~~D~n~Dg~IS~--------~Ef~~cl~ 107 (116)
T cd00252 49 PVGWMFNQLDGNYDGKLSHHELAPIR--LD--PNEHCIKPFFESCDLDKDGSISL--------DEWCYCFI 107 (116)
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHH--cc--chHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHh
Confidence 45678999999999999999999876 22 34667889999999999999999 99999983
No 65
>KOG0377|consensus
Probab=98.28 E-value=6.2e-06 Score=76.34 Aligned_cols=65 Identities=18% Similarity=0.359 Sum_probs=47.2
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHh----CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSL----GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l----~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
..|..+|..+|.|++|.|+.+||+.+.+-+ ...++..++.++-+.+|.|+| |.|++.||+..+.-
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkD--G~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKD--GKIDLNEFLEAFRL 615 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCC--CcccHHHHHHHHhh
Confidence 355667778888888888888887766554 345677777777777888888 88888887776543
No 66
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.23 E-value=1.8e-06 Score=64.08 Aligned_cols=64 Identities=17% Similarity=0.326 Sum_probs=54.8
Q ss_pred chhhhhccCCC--CCCCcCHHHHHHHHH-HhCCCCC----HHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 134 WWFKSKSGHKN--YRGYISASDLRAVLQ-CLGEDLS----EEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 134 ~~~~F~~~D~d--~~G~Is~~El~~~L~-~~g~~~~----~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
+...|+.|+.. ++|.|+.+||+.+|. .+|..++ +.++..+++.+|.|++|.|+| +||+.++...
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f--------~eF~~~~~~~ 80 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSF--------EEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcH--------HHHHHHHHHH
Confidence 34678888865 489999999999997 5666666 899999999999999999999 9999988764
No 67
>KOG0041|consensus
Probab=98.22 E-value=3.8e-06 Score=69.98 Aligned_cols=74 Identities=28% Similarity=0.321 Sum_probs=67.6
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.++..+++.+..+|+.||.+.||+|+..||+.+|.+||.+-+---++.++...|.|.+ |+|+|.||+.++....
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~d--gklSfreflLIfrkaa 165 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFD--GKLSFREFLLIFRKAA 165 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccc--cchhHHHHHHHHHHHh
Confidence 4667788999999999999999999999999999999988888889999999999999 9999999999887653
No 68
>PF14658 EF-hand_9: EF-hand domain
Probab=98.12 E-value=1.4e-05 Score=55.16 Aligned_cols=61 Identities=25% Similarity=0.434 Sum_probs=56.4
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 64 AFRLFDKDGDGSITKEELGRVMRSLGQ-FAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 64 ~F~~~D~d~dG~Is~~E~~~~L~~l~~-~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
+|..+|.++.|.|...++...|+.++. .+.+.+++.+.+.+|+++. .|.|+++.|+..|..
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~-~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGR-DGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCC-CceEeHHHHHHHHHH
Confidence 689999999999999999999999998 8999999999999998864 488999999999875
No 69
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.12 E-value=4.3e-06 Score=48.30 Aligned_cols=28 Identities=61% Similarity=0.947 Sum_probs=21.4
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHh
Q psy9152 61 FKEAFRLFDKDGDGSITKEELGRVMRSL 88 (324)
Q Consensus 61 l~~~F~~~D~d~dG~Is~~E~~~~L~~l 88 (324)
++++|+.+|+|+||+|+.+||..+|+.+
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 5677888888888888888888777653
No 70
>KOG0751|consensus
Probab=98.09 E-value=0.00012 Score=69.03 Aligned_cols=217 Identities=12% Similarity=0.118 Sum_probs=128.7
Q ss_pred ChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHH-hCCCCCHHH-HHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCC
Q psy9152 54 PVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRS-LGQFAREEE-LQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGS 131 (324)
Q Consensus 54 ~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~-l~~~~~~~e-~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~ 131 (324)
.+++++.+.--|...+.++.-+.+.++|...... ++..-...+ ++.+-...|...| |-|||+||+.+-..++.. .
T Consensus 31 ~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKD--glisf~eF~afe~~lC~p-D 107 (694)
T KOG0751|consen 31 DPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKD--GLISFQEFRAFESVLCAP-D 107 (694)
T ss_pred ChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhccc--ccccHHHHHHHHhhccCc-h
Confidence 3344444444456677888889999999775443 344434444 4444455678888 999999999875444311 2
Q ss_pred CcchhhhhccCCCCCCCcCHHHHHHHHHHhCC------CCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 132 GGWWFKSKSGHKNYRGYISASDLRAVLQCLGE------DLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 132 ~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~------~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.....+|..||+.++|.+|.+++..+..+... +.+.+-+.. .|..+..-.++| .+|.+++...
T Consensus 108 al~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~---~Fg~~~~r~~ny--------~~f~Q~lh~~ 176 (694)
T KOG0751|consen 108 ALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKL---HFGDIRKRHLNY--------AEFTQFLHEF 176 (694)
T ss_pred HHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHH---HhhhHHHHhccH--------HHHHHHHHHH
Confidence 23467899999999999999999999986432 222222333 444444556788 9999998765
Q ss_pred CCCCccchhHHhHHHHHHHHHHHhh------hHHHHHHHHhhhh------hHHHHHHHHhccCCCCccccchhhHHHHHH
Q psy9152 206 GATTEEKTADQEEKELRDAFREVED------IADEVSDCVRNTG------ELREFIVLREIDSGGRLVVVRFDRFVFRFG 273 (324)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~aF~~~d~------~~~el~~~l~~~~------~~~~~~~~~d~D~dg~~~~i~~~EF~~~~~ 273 (324)
. .+.-++||+..|+ +.-+++..+.... .+++.+ .-+-+..+++.++|--|.- |.
T Consensus 177 ~-----------~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nl--v~vagg~~~H~vSf~yf~a-fn 242 (694)
T KOG0751|consen 177 Q-----------LEHAEQAFREKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENL--VSVAGGNDSHQVSFSYFNA-FN 242 (694)
T ss_pred H-----------HHHHHHHHHHhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhh--hhhcCCCCccccchHHHHH-HH
Confidence 3 4568899999988 3445555443321 222222 1222223333556554432 22
Q ss_pred HHHHHhhhhHHHHHHHHhhcccccccc
Q psy9152 274 RFVVFRLGKFVVFMFEVFCDHYNEISA 300 (324)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (324)
++.. .=..++...+-+.+||++++-
T Consensus 243 slL~--~melirk~y~s~~~~~~d~~~ 267 (694)
T KOG0751|consen 243 SLLN--NMELIRKIYSSLAGTRKDVEV 267 (694)
T ss_pred HHHh--hHHHHHHHHHHhcccccchhh
Confidence 2110 112333346666777766653
No 71
>KOG0041|consensus
Probab=98.02 E-value=9.5e-06 Score=67.65 Aligned_cols=67 Identities=30% Similarity=0.425 Sum_probs=60.3
Q ss_pred cchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCC
Q psy9152 133 GWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGA 207 (324)
Q Consensus 133 ~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~ 207 (324)
....+|+.||.+.||+|+..||+.+|..+|.+-|.--+..++...|.|.||+|+| -||+-++.....
T Consensus 100 ~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSf--------reflLIfrkaaa 166 (244)
T KOG0041|consen 100 DAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSF--------REFLLIFRKAAA 166 (244)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhH--------HHHHHHHHHHhc
Confidence 4467899999999999999999999999998777777899999999999999999 999988876543
No 72
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.00 E-value=5.6e-05 Score=55.89 Aligned_cols=68 Identities=12% Similarity=0.270 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 57 LIVEFKEAFRLFDKDGDGSITKEELGRVMRS-----LGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 57 ~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~-----l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.+..+-.+|+.|-. +.++++..||+.+|.. +...-.+..+..+++..|.|+| |.|+|.||+.++..+.
T Consensus 6 ai~~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~D--g~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 6 SMEKMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRD--GKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCC--CcCcHHHHHHHHHHHH
Confidence 34667788999984 4679999999999965 2344567889999999999999 9999999999887653
No 73
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.91 E-value=1.7e-05 Score=46.62 Aligned_cols=30 Identities=60% Similarity=1.021 Sum_probs=25.9
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHH-HhC
Q psy9152 60 EFKEAFRLFDKDGDGSITKEELGRVMR-SLG 89 (324)
Q Consensus 60 ~l~~~F~~~D~d~dG~Is~~E~~~~L~-~l~ 89 (324)
+++.+|+.+|+|++|+|+.+||..+|+ ++|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478899999999999999999999998 565
No 74
>KOG0751|consensus
Probab=97.90 E-value=0.00026 Score=66.69 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=88.4
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhC------CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCC
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSLG------QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSG 132 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~------~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~ 132 (324)
.....+|+.||+.++|.+|.+++..+..... ..++.+-+...| ..+.. ..++|.+|.+.++.... +
T Consensus 108 al~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~F---g~~~~--r~~ny~~f~Q~lh~~~~---E 179 (694)
T KOG0751|consen 108 ALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHF---GDIRK--RHLNYAEFTQFLHEFQL---E 179 (694)
T ss_pred HHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHh---hhHHH--HhccHHHHHHHHHHHHH---H
Confidence 4567889999999999999999999987643 233444454433 23334 67999999999887652 3
Q ss_pred cchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHh-CCCCCCceee
Q psy9152 133 GWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEV-DVDGDGRIDF 187 (324)
Q Consensus 133 ~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~-D~~~dG~I~~ 187 (324)
.-.++|+..|+.++|.||.-+++.++.....++....++..+... ..+...+++|
T Consensus 180 ~~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~vagg~~~H~vSf 235 (694)
T KOG0751|consen 180 HAEQAFREKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVAGGNDSHQVSF 235 (694)
T ss_pred HHHHHHHHhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhcCCCCccccch
Confidence 467899999999999999999999998766555555566555444 3444456777
No 75
>KOG0040|consensus
Probab=97.86 E-value=8e-05 Score=77.85 Aligned_cols=124 Identities=19% Similarity=0.341 Sum_probs=91.1
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHHHhCCCCC--H-----HHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCC
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQCLGEDLS--E-----EEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGA 207 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~--~-----~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~ 207 (324)
.-+|+.||.+.+|.++..+|+.+|+.+|+.++ + .+++.++..+|++.+|.|+. ++|+.+|.....
T Consensus 2256 s~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl--------~dY~afmi~~ET 2327 (2399)
T KOG0040|consen 2256 SMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSL--------QDYMAFMISKET 2327 (2399)
T ss_pred HHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccH--------HHHHHHHHhccc
Confidence 34799999999999999999999999997763 2 36899999999999999999 999999998754
Q ss_pred CCccchhHHhHHHHHHHHHHHhh-----hHHHHHHHHhhhhhHHHH--HHHHhccCC---CCccccchhhHHHHH
Q psy9152 208 TTEEKTADQEEKELRDAFREVED-----IADEVSDCVRNTGELREF--IVLREIDSG---GRLVVVRFDRFVFRF 272 (324)
Q Consensus 208 ~~~~~~~~~~~~~l~~aF~~~d~-----~~~el~~~l~~~~~~~~~--~~~~d~D~d---g~~~~i~~~EF~~~~ 272 (324)
.. -....++..||+.++. +..++...|++ .+.+-+ .+-.-++.. ..-+.++|.+|++.+
T Consensus 2328 eN-----I~s~~eIE~AfraL~a~~~yvtke~~~~~ltr-eqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2328 EN-----ILSSEEIEDAFRALDAGKPYVTKEELYQNLTR-EQAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSL 2396 (2399)
T ss_pred cc-----ccchHHHHHHHHHhhcCCccccHHHHHhcCCH-HHHHHHHHHhhhhcccccCCCccccccHHHHHHHH
Confidence 22 1123479999999998 77788777776 322222 122222221 112257888888764
No 76
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.86 E-value=9.2e-05 Score=56.54 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=59.8
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
.+++++...+..+|..+|. ++|.|+..+.+.++... .++...+..+|...|.+++ |.++++||+..|+-.
T Consensus 3 ~ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S--~L~~~~L~~IW~LaD~~~d--G~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKS--GLPRDVLAQIWNLADIDND--GKLDFEEFAIAMHLI 72 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHT--TSSHHHHHHHHHHH-SSSS--SEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHc--CCCHHHHHHHHhhhcCCCC--CcCCHHHHHHHHHHH
Confidence 3677888999999999986 58999999999998775 4688999999999999999 999999999987654
No 77
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.82 E-value=6.3e-05 Score=55.63 Aligned_cols=64 Identities=14% Similarity=0.354 Sum_probs=52.1
Q ss_pred chhhhhccCCCCCCCcCHHHHHHHHHH-h----CCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 134 WWFKSKSGHKNYRGYISASDLRAVLQC-L----GEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 134 ~~~~F~~~D~d~~G~Is~~El~~~L~~-~----g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
+..+|..|- .+.+.++..||+.+|.. + +..-.+..++.+++..|.|+||.|+| +||+.++....
T Consensus 10 lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF--------~EF~~Lv~~l~ 78 (91)
T cd05024 10 MMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGF--------QSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcH--------HHHHHHHHHHH
Confidence 345677776 34679999999999973 3 34456888999999999999999999 99999987653
No 78
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.81 E-value=3.3e-05 Score=44.55 Aligned_cols=28 Identities=50% Similarity=0.951 Sum_probs=25.8
Q ss_pred HHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 169 EIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 169 ~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
++..+|+.+|.|+||.|++ +||+.++..
T Consensus 1 E~~~~F~~~D~d~dG~I~~--------~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDF--------EEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEH--------HHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCH--------HHHHHHHHh
Confidence 5789999999999999999 999999875
No 79
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.65 E-value=2e-05 Score=46.28 Aligned_cols=29 Identities=34% Similarity=0.414 Sum_probs=23.1
Q ss_pred chhhhhccCCCCCCCcCHHHHHHHHH-HhC
Q psy9152 134 WWFKSKSGHKNYRGYISASDLRAVLQ-CLG 162 (324)
Q Consensus 134 ~~~~F~~~D~d~~G~Is~~El~~~L~-~~g 162 (324)
++.+|+.+|.|++|+|+.+||..+|. ++|
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 46788888999999999999998888 565
No 80
>KOG2562|consensus
Probab=97.65 E-value=0.00062 Score=63.89 Aligned_cols=121 Identities=21% Similarity=0.260 Sum_probs=74.2
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCcchhhhh
Q psy9152 60 EFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGGWWFKSK 139 (324)
Q Consensus 60 ~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~~~~~F~ 139 (324)
.+.++|-..++-++|+|+..++....-. ..+..+-..-|.+.- -...+|+.|...+.. |-
T Consensus 226 vi~rIFy~~nrs~tG~iti~el~~snll-------~~l~~l~eEed~nq~-~~~FS~e~f~viy~k------------Fw 285 (493)
T KOG2562|consen 226 VIQRIFYYLNRSRTGRITIQELLRSNLL-------DALLELDEEEDINQV-TRYFSYEHFYVIYCK------------FW 285 (493)
T ss_pred HhhhhheeeCCccCCceeHHHHHHhHHH-------HHHHHHHHHhhhhhh-hhheeHHHHHHHHHH------------Hh
Confidence 4567888899999999999998663211 111222222233332 023577776666544 56
Q ss_pred ccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCC
Q psy9152 140 SGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGA 207 (324)
Q Consensus 140 ~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~ 207 (324)
.+|+|++|.|+.++|+..-.. .++.-.++.+|.+.-. |.+.. ++|.++|++|+-++.....
T Consensus 286 eLD~Dhd~lidk~~L~ry~d~---tlt~~ivdRIFs~v~r---~~~~~-~eGrmdykdFv~FilA~e~ 346 (493)
T KOG2562|consen 286 ELDTDHDGLIDKEDLKRYGDH---TLTERIVDRIFSQVPR---GFTVK-VEGRMDYKDFVDFILAEED 346 (493)
T ss_pred hhccccccccCHHHHHHHhcc---chhhHHHHHHHhhccc---cceee-ecCcccHHHHHHHHHHhcc
Confidence 779999999999998866432 3456677888884322 22222 3344444999988887654
No 81
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.58 E-value=0.00018 Score=46.80 Aligned_cols=48 Identities=23% Similarity=0.444 Sum_probs=40.0
Q ss_pred cCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHh
Q psy9152 149 ISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYN 204 (324)
Q Consensus 149 Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~ 204 (324)
+|..|++.+|+.+.+.+++..+..+|+.+|.+++|.|.. +||..+...
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~--------~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEG--------EEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEH--------HHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccH--------HHHHHHHHH
Confidence 688999999999999999999999999999999999999 999988754
No 82
>KOG0038|consensus
Probab=97.56 E-value=0.00033 Score=55.62 Aligned_cols=96 Identities=28% Similarity=0.489 Sum_probs=68.0
Q ss_pred HhhhccCCCchhH-HHHHHhhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhC-CCCCHH
Q psy9152 18 FRLFDKDGDGVQA-RHFRQFFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLG-QFAREE 95 (324)
Q Consensus 18 F~~~D~dgdG~I~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~-~~~~~~ 95 (324)
-..|-.||.|.++ .+|...++ ..+. ..+.+ -...-+|+.+|-|+++.|...++...+..+- ..++.+
T Consensus 77 ~e~FSeDG~GnlsfddFlDmfS---------V~sE-~APrd-lK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~e 145 (189)
T KOG0038|consen 77 CEVFSEDGRGNLSFDDFLDMFS---------VFSE-MAPRD-LKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDE 145 (189)
T ss_pred HHHhccCCCCcccHHHHHHHHH---------HHHh-hChHH-hhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHH
Confidence 3556789999997 33333221 1111 11112 2345678999999999999999999998874 456666
Q ss_pred H----HHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 96 E----LQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 96 e----~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
+ +++++..+|.+|+ |++++.||-..+.+.
T Consensus 146 Ev~~i~ekvieEAD~DgD--gkl~~~eFe~~i~ra 178 (189)
T KOG0038|consen 146 EVELICEKVIEEADLDGD--GKLSFAEFEHVILRA 178 (189)
T ss_pred HHHHHHHHHHHHhcCCCC--CcccHHHHHHHHHhC
Confidence 6 4567788899999 999999999887664
No 83
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.52 E-value=0.00013 Score=40.56 Aligned_cols=25 Identities=52% Similarity=0.935 Sum_probs=18.6
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHH
Q psy9152 61 FKEAFRLFDKDGDGSITKEELGRVM 85 (324)
Q Consensus 61 l~~~F~~~D~d~dG~Is~~E~~~~L 85 (324)
|+.+|+.+|.|+||.|+.+||..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 3567788888888888888887653
No 84
>KOG0169|consensus
Probab=97.36 E-value=0.0029 Score=63.01 Aligned_cols=143 Identities=15% Similarity=0.206 Sum_probs=117.6
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCC
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGS 131 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~ 131 (324)
.........+..+|+..|++++|.++..+...+++.+...+....+..+++..+..++ +++...+|+..........
T Consensus 129 ~~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~--~k~~~~~~~~~~~~~~~rp- 205 (746)
T KOG0169|consen 129 RQRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQT--GKLEEEEFVKFRKELTKRP- 205 (746)
T ss_pred hhcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhcc--ceehHHHHHHHHHhhccCc-
Confidence 3444556788899999999999999999999999999999999999999999988888 9999999999887765432
Q ss_pred CcchhhhhccCCCCCCCcCHHHHHHHHHHhC--CCCCHHHHHHHHHHhCCCC----CCceeeccCCCCCHHHHHHHHHhc
Q psy9152 132 GGWWFKSKSGHKNYRGYISASDLRAVLQCLG--EDLSEEEIEDMIKEVDVDG----DGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 132 ~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g--~~~~~~~~~~l~~~~D~~~----dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.+...|..+-.+ .++++..+|..+|...+ .+.+...++.|+..+.... .+.+++ +.|.++|...
T Consensus 206 -ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~l--------dgF~~yL~S~ 275 (746)
T KOG0169|consen 206 -EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSL--------DGFTRYLFSP 275 (746)
T ss_pred -hHHHHHHHHhCC-CCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecH--------HHHHHHhcCc
Confidence 677777777544 89999999999998654 4678888999998875443 345777 9999999876
Q ss_pred CC
Q psy9152 206 GA 207 (324)
Q Consensus 206 ~~ 207 (324)
..
T Consensus 276 ~~ 277 (746)
T KOG0169|consen 276 DC 277 (746)
T ss_pred cC
Confidence 54
No 85
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.34 E-value=0.00095 Score=43.50 Aligned_cols=50 Identities=12% Similarity=0.150 Sum_probs=41.4
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 75 SITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 75 ~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
+++..|++.+|+.+.+.+++..+..+|+..|.+++ |.+.-+||..++..+
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~--g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQS--GRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSS--SEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCC--CCccHHHHHHHHHHh
Confidence 46889999999999999999999999999999999 999999999988654
No 86
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.27 E-value=0.00084 Score=51.27 Aligned_cols=61 Identities=26% Similarity=0.365 Sum_probs=53.1
Q ss_pred chhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 134 WWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 134 ~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
...+|...|. ++|.|+.++...++...| ++.+.+..|+...|.+++|.+++ +||+.+|.-.
T Consensus 12 y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~--------~EF~iAm~Li 72 (104)
T PF12763_consen 12 YDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDF--------EEFAIAMHLI 72 (104)
T ss_dssp HHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEH--------HHHHHHHHHH
T ss_pred HHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCH--------HHHHHHHHHH
Confidence 4567888885 689999999999998777 88899999999999999999999 9999888753
No 87
>KOG4666|consensus
Probab=97.17 E-value=0.00039 Score=62.36 Aligned_cols=120 Identities=14% Similarity=0.053 Sum_probs=91.5
Q ss_pred CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccC--CCcchhhhhccCCCCCCC
Q psy9152 71 DGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFG--SGGWWFKSKSGHKNYRGY 148 (324)
Q Consensus 71 d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~--~~~~~~~F~~~D~d~~G~ 148 (324)
.+.+.|...||..-|+ .+.+ ..+..+|..+|.+++ |.++|.|.+..+..+.... ..-++.+|+.|+.+.||.
T Consensus 239 ~kg~~igi~efa~~l~---vpvs-d~l~~~f~LFde~~t--g~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~ 312 (412)
T KOG4666|consen 239 AKGPDIGIVEFAVNLR---VPVS-DKLAPTFMLFDEGTT--GNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGI 312 (412)
T ss_pred ccCCCcceeEeeeeee---cchh-hhhhhhhheecCCCC--CcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccc
Confidence 4556666666654442 2222 567889999999999 9999999988877665332 344678999999999999
Q ss_pred cCHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 149 ISASDLRAVLQ-CLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 149 Is~~El~~~L~-~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
+...+|.-+|+ .+|. ..-.+-.+|...+...+|+|++ .+|.+++....
T Consensus 313 ~ge~~ls~ilq~~lgv--~~l~v~~lf~~i~q~d~~ki~~--------~~f~~fa~~~p 361 (412)
T KOG4666|consen 313 SGEHILSLILQVVLGV--EVLRVPVLFPSIEQKDDPKIYA--------SNFRKFAATEP 361 (412)
T ss_pred cchHHHHHHHHHhcCc--ceeeccccchhhhcccCcceeH--------HHHHHHHHhCc
Confidence 99999999998 4563 3333667899999999999999 99999887643
No 88
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.14 E-value=0.0014 Score=61.84 Aligned_cols=58 Identities=22% Similarity=0.186 Sum_probs=47.4
Q ss_pred CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCcchhhhhccCCCCCCCcCHHHHHHHHHH
Q psy9152 89 GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGGWWFKSKSGHKNYRGYISASDLRAVLQC 160 (324)
Q Consensus 89 ~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~ 160 (324)
|.......+..+|+.+|.+++ |.|+.+||.. ...+|..+|.|++|.|+.+||..++..
T Consensus 328 ~~~~~~~~l~~aF~~~D~dgd--G~Is~~E~~~------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 328 GGEAFTHAAQEIFRLYDLDGD--GFITREEWLG------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred ccChhhHHHHHHHHHhCCCCC--CcCcHHHHHH------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 455667778888999999999 9999999853 246789999999999999999988864
No 89
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.12 E-value=0.0011 Score=62.52 Aligned_cols=54 Identities=31% Similarity=0.449 Sum_probs=47.9
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 58 IVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 58 ~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
...+..+|+.+|.+++|.|+.+||.. +..+|..+|.|++ |.|+++||...+...
T Consensus 333 ~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~D--G~Is~eEf~~~~~~~ 386 (391)
T PRK12309 333 THAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHD--GKITPEEMRAGLGAA 386 (391)
T ss_pred hHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCC--CCCcHHHHHHHHHHH
Confidence 46788999999999999999999932 5778999999999 999999999988764
No 90
>KOG0046|consensus
Probab=97.07 E-value=0.002 Score=61.37 Aligned_cols=76 Identities=26% Similarity=0.329 Sum_probs=66.5
Q ss_pred hhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCC---CCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 49 LYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQF---AREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 49 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~---~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
....++.+++..+...|...| +++|+|+..++..++...+.. ...++++.++...+.|.+ |.|+|++|+..+..
T Consensus 9 ~~~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~--g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 9 LQSQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDAD--GRVEFEEFVGIFLN 85 (627)
T ss_pred hcccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcC--CccCHHHHHHHHHh
Confidence 345678889999999999999 999999999999999987643 357899999999999999 99999999998766
Q ss_pred hh
Q psy9152 126 AL 127 (324)
Q Consensus 126 ~~ 127 (324)
..
T Consensus 86 l~ 87 (627)
T KOG0046|consen 86 LK 87 (627)
T ss_pred hh
Confidence 54
No 91
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.89 E-value=0.0015 Score=36.21 Aligned_cols=25 Identities=48% Similarity=0.974 Sum_probs=21.8
Q ss_pred HHHHHHHhCCCCCCceeeccCCCCCHHHHHHHH
Q psy9152 170 IEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIV 202 (324)
Q Consensus 170 ~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l 202 (324)
++.+|+.+|.|+||.|++ +||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~--------~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISF--------EEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEH--------HHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCH--------HHHHHHC
Confidence 457899999999999999 9998753
No 92
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.80 E-value=0.00078 Score=52.36 Aligned_cols=64 Identities=22% Similarity=0.330 Sum_probs=45.3
Q ss_pred ChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHH
Q psy9152 54 PVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCG 121 (324)
Q Consensus 54 ~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~ 121 (324)
.......+.-.|..+|.|+||.|+..|+..+...+ ...+.=+..++...|.|+| |.||..|+..
T Consensus 49 ~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d--~~Is~~EW~~ 112 (113)
T PF10591_consen 49 YSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKD--GKISLDEWCN 112 (113)
T ss_dssp GGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-S--SSEEHHHHHH
T ss_pred hhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCC--CCCCHHHHcc
Confidence 33455677788999999999999999998776544 3444457888999999999 9999999875
No 93
>KOG1029|consensus
Probab=96.78 E-value=0.01 Score=59.07 Aligned_cols=59 Identities=27% Similarity=0.435 Sum_probs=52.7
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHH
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVY 203 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~ 203 (324)
+.+|+..|+..+|++|-..-+.+|...+ ++...+..|....|.|+||+++- +||+-.|.
T Consensus 198 ~QlFNa~DktrsG~Lsg~qaR~aL~qS~--Lpq~~LA~IW~LsDvd~DGkL~~--------dEfilam~ 256 (1118)
T KOG1029|consen 198 RQLFNALDKTRSGYLSGQQARSALGQSG--LPQNQLAHIWTLSDVDGDGKLSA--------DEFILAMH 256 (1118)
T ss_pred HHHhhhcccccccccccHHHHHHHHhcC--CchhhHhhheeeeccCCCCcccH--------HHHHHHHH
Confidence 4569999999999999999999987655 77888999999999999999999 99998776
No 94
>KOG4666|consensus
Probab=96.69 E-value=0.0052 Score=55.30 Aligned_cols=102 Identities=16% Similarity=0.034 Sum_probs=86.5
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCcchh
Q psy9152 58 IVEFKEAFRLFDKDGDGSITKEELGRVMRSL-GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGGWWF 136 (324)
Q Consensus 58 ~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l-~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~~~~ 136 (324)
.+.+...|..||.+++|.+++.|-...|.-+ +...+...++.-|+.++...| |.+.-.+|...++.......-.+-.
T Consensus 258 sd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eD--g~~ge~~ls~ilq~~lgv~~l~v~~ 335 (412)
T KOG4666|consen 258 SDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAED--GISGEHILSLILQVVLGVEVLRVPV 335 (412)
T ss_pred hhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccc--cccchHHHHHHHHHhcCcceeeccc
Confidence 4778899999999999999999888777665 456778888999999999999 9999999888888766554455667
Q ss_pred hhhccCCCCCCCcCHHHHHHHHHHh
Q psy9152 137 KSKSGHKNYRGYISASDLRAVLQCL 161 (324)
Q Consensus 137 ~F~~~D~d~~G~Is~~El~~~L~~~ 161 (324)
.|...+...+|.|+.++|+++....
T Consensus 336 lf~~i~q~d~~ki~~~~f~~fa~~~ 360 (412)
T KOG4666|consen 336 LFPSIEQKDDPKIYASNFRKFAATE 360 (412)
T ss_pred cchhhhcccCcceeHHHHHHHHHhC
Confidence 8999999999999999999988643
No 95
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.49 E-value=0.00047 Score=53.58 Aligned_cols=56 Identities=23% Similarity=0.381 Sum_probs=36.5
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHH
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVE 200 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~ 200 (324)
.-.|..+|.|+||.|+..|+..+...+ .....-+..++..+|.|+||.|+. .|+..
T Consensus 57 ~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~--------~EW~~ 112 (113)
T PF10591_consen 57 HWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISL--------DEWCN 112 (113)
T ss_dssp HHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEH--------HHHHH
T ss_pred hhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCH--------HHHcc
Confidence 335888888888888888888776544 233344677888888888888888 88764
No 96
>KOG4065|consensus
Probab=95.96 E-value=0.029 Score=42.90 Aligned_cols=66 Identities=20% Similarity=0.286 Sum_probs=47.8
Q ss_pred CChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHh------CC----CCCHHHHHHHHH----HhccCCCCCcceeHHH
Q psy9152 53 SPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSL------GQ----FAREEELQQMLE----EVDINGKKAGNYSIMN 118 (324)
Q Consensus 53 ~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l------~~----~~~~~e~~~l~~----~~D~d~d~~g~Is~~E 118 (324)
+++++++ ...|.+.|.|++|.|+--|+.++++.. |. -+++.++..++. .-|.|+| |.|+|.|
T Consensus 63 mtpeqlq--fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~D--G~IDYgE 138 (144)
T KOG4065|consen 63 MTPEQLQ--FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGD--GVIDYGE 138 (144)
T ss_pred CCHHHHh--hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCC--ceeeHHH
Confidence 4444432 356889999999999999999998754 21 245666655544 4578899 9999999
Q ss_pred HHHH
Q psy9152 119 HCGA 122 (324)
Q Consensus 119 F~~~ 122 (324)
|+..
T Consensus 139 flK~ 142 (144)
T KOG4065|consen 139 FLKR 142 (144)
T ss_pred HHhh
Confidence 9764
No 97
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.89 E-value=0.011 Score=32.59 Aligned_cols=27 Identities=59% Similarity=1.004 Sum_probs=19.7
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy9152 61 FKEAFRLFDKDGDGSITKEELGRVMRS 87 (324)
Q Consensus 61 l~~~F~~~D~d~dG~Is~~E~~~~L~~ 87 (324)
++.+|..+|.+++|.|+..+|..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456777777777788888887777654
No 98
>KOG0046|consensus
Probab=95.52 E-value=0.02 Score=54.76 Aligned_cols=64 Identities=33% Similarity=0.530 Sum_probs=55.1
Q ss_pred chhhhhccCCCCCCCcCHHHHHHHHHHhCCC---CCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 134 WWFKSKSGHKNYRGYISASDLRAVLQCLGED---LSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 134 ~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~---~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
+...|...| +++|+|+..|+..++...+.. ...+++..++...+.|.+|+|+| ++|+..+....
T Consensus 21 l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~f--------e~f~~~~~~l~ 87 (627)
T KOG0046|consen 21 LKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEF--------EEFVGIFLNLK 87 (627)
T ss_pred HHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCH--------HHHHHHHHhhh
Confidence 456799999 999999999999999976643 45789999999999999999999 99999776543
No 99
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=95.25 E-value=0.099 Score=43.25 Aligned_cols=100 Identities=14% Similarity=0.041 Sum_probs=61.2
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhcc---CCCCCcceeHHHH---HHHHHhhh-----
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDI---NGKKAGNYSIMNH---CGAVVNAL----- 127 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~---d~d~~g~Is~~EF---~~~~~~~~----- 127 (324)
-.|++-...+|+|+||.|.+-|-...++.+|..+.-..+-.++-.... ... +.+.-.-| +..+....
T Consensus 7 T~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~--~w~p~P~f~Iyi~nIhk~kHGSDS 84 (174)
T PF05042_consen 7 TVLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQP--SWIPDPFFRIYIKNIHKGKHGSDS 84 (174)
T ss_pred cHHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCC--CCCCCCceeEEeecccccccCCCc
Confidence 356777788999999999999999999999877654443333322100 000 10000000 00111100
Q ss_pred -------ccCCCcchhhhhccCCCCCCCcCHHHHHHHHHH
Q psy9152 128 -------DFGSGGWWFKSKSGHKNYRGYISASDLRAVLQC 160 (324)
Q Consensus 128 -------~~~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~ 160 (324)
+..+.....+|..++..+.+.||..|+.++++.
T Consensus 85 g~YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 85 GAYDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKG 124 (174)
T ss_pred cccccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence 011356778899998888889999999999875
No 100
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.22 E-value=0.018 Score=31.61 Aligned_cols=25 Identities=16% Similarity=0.104 Sum_probs=14.3
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHH
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQ 159 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~ 159 (324)
+.+|+.+|.+++|.|+..||..++.
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 3455555666666666666655554
No 101
>KOG0169|consensus
Probab=94.41 E-value=0.17 Score=50.89 Aligned_cols=112 Identities=21% Similarity=0.271 Sum_probs=81.8
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCCCCccchh
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGATTEEKTA 214 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~~~~~~~~ 214 (324)
...|+..|++++|.++..+...+++.+...+....+..+|+..+..+++++.. .+|.........
T Consensus 139 ~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~--------~~~~~~~~~~~~------- 203 (746)
T KOG0169|consen 139 HSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEE--------EEFVKFRKELTK------- 203 (746)
T ss_pred HHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehH--------HHHHHHHHhhcc-------
Confidence 45799999999999999999999999998899999999999998888999999 999988877653
Q ss_pred HHhHHHHHHHHHHHhh-----hHHHHHHHHhhhhhHHHHHHHHhccCCCCccccchhhHHHHHHHHH
Q psy9152 215 DQEEKELRDAFREVED-----IADEVSDCVRNTGELREFIVLREIDSGGRLVVVRFDRFVFRFGRFV 276 (324)
Q Consensus 215 ~~~~~~l~~aF~~~d~-----~~~el~~~l~~~~~~~~~~~~~d~D~dg~~~~i~~~EF~~~~~~~~ 276 (324)
+. ++...|..+-. +..+|...+.. ..+.+|.+ .-..++++..|..-.
T Consensus 204 --rp-ev~~~f~~~s~~~~~ls~~~L~~Fl~~-----------~q~e~~~~-~~~ae~ii~~~e~~k 255 (746)
T KOG0169|consen 204 --RP-EVYFLFVQYSHGKEYLSTDDLLRFLEE-----------EQGEDGAT-LDEAEEIIERYEPSK 255 (746)
T ss_pred --Cc-hHHHHHHHHhCCCCccCHHHHHHHHHH-----------hccccccc-HHHHHHHHHHhhhhh
Confidence 22 56666665543 45555555443 23334444 345566666654433
No 102
>KOG4065|consensus
Probab=94.38 E-value=0.091 Score=40.25 Aligned_cols=57 Identities=25% Similarity=0.437 Sum_probs=40.7
Q ss_pred hhhccCCCCCCCcCHHHHHHHHHHh------CC---C-CCHHHHHH----HHHHhCCCCCCceeeccCCCCCHHHHHHH
Q psy9152 137 KSKSGHKNYRGYISASDLRAVLQCL------GE---D-LSEEEIED----MIKEVDVDGDGRIDFNGDGYFSFEEFVEI 201 (324)
Q Consensus 137 ~F~~~D~d~~G~Is~~El~~~L~~~------g~---~-~~~~~~~~----l~~~~D~~~dG~I~~~~~g~~~~~EF~~~ 201 (324)
-|+..|.|++|.|+--|+..++... |. + .++.++.. +++.-|.|+||.|+| -||++.
T Consensus 72 YF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDY--------gEflK~ 142 (144)
T KOG4065|consen 72 YFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDY--------GEFLKR 142 (144)
T ss_pred hhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeH--------HHHHhh
Confidence 4788889999999999999888643 21 2 34555544 455567777888888 999864
No 103
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.33 E-value=0.19 Score=36.44 Aligned_cols=63 Identities=19% Similarity=0.374 Sum_probs=51.2
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHhC-C-CCCHHHHHHHHHHhccC----CCCCcceeHHHHHHHHHhh
Q psy9152 61 FKEAFRLFDKDGDGSITKEELGRVMRSLG-Q-FAREEELQQMLEEVDIN----GKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 61 l~~~F~~~D~d~dG~Is~~E~~~~L~~l~-~-~~~~~e~~~l~~~~D~d----~d~~g~Is~~EF~~~~~~~ 126 (324)
+..+|..+-. +.+.|+.++|..+|..-. . ..+..++..++..+..+ .. +.++++.|..++...
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~--~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQK--GQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCT--TEEEHHHHHHHHHST
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhccc--CCcCHHHHHHHHCCC
Confidence 5778889865 789999999999997654 3 46899999999998654 35 889999999998764
No 104
>KOG1707|consensus
Probab=93.92 E-value=0.42 Score=46.87 Aligned_cols=146 Identities=12% Similarity=0.095 Sum_probs=89.5
Q ss_pred HhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHH-HhCCCCCHHHHHHHHHHhccCCC---CCcceeHHHHHHHH
Q psy9152 48 MLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMR-SLGQFAREEELQQMLEEVDINGK---KAGNYSIMNHCGAV 123 (324)
Q Consensus 48 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~-~l~~~~~~~e~~~l~~~~D~d~d---~~g~Is~~EF~~~~ 123 (324)
...+.+.+.-+..|.++|..-|.|.+|.++-.|+...=+ .++.++...++..+-...+..-. -...++..-|+-..
T Consensus 184 a~~qelkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~ 263 (625)
T KOG1707|consen 184 AEEQELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLN 263 (625)
T ss_pred cccccccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHH
Confidence 344567777789999999999999999999999977543 46677777766665554432211 01234444454432
Q ss_pred HhhhccC-------------------------------------------CCcchhhhhccCCCCCCCcCHHHHHHHHHH
Q psy9152 124 VNALDFG-------------------------------------------SGGWWFKSKSGHKNYRGYISASDLRAVLQC 160 (324)
Q Consensus 124 ~~~~~~~-------------------------------------------~~~~~~~F~~~D~d~~G~Is~~El~~~L~~ 160 (324)
......+ ..-+..+|..+|.|+||.++..|+..+...
T Consensus 264 ~lfiergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~ 343 (625)
T KOG1707|consen 264 TLFIERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFST 343 (625)
T ss_pred HHHHHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhh
Confidence 1111000 001245699999999999999999999986
Q ss_pred hCCCC-C-HHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 161 LGEDL-S-EEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 161 ~g~~~-~-~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.+... + .-+.. .--.+..|.+++ +-|+..+.-+
T Consensus 344 ~P~~pW~~~~~~~----~t~~~~~G~ltl--------~g~l~~WsL~ 378 (625)
T KOG1707|consen 344 APGSPWTSSPYKD----STVKNERGWLTL--------NGFLSQWSLM 378 (625)
T ss_pred CCCCCCCCCcccc----cceecccceeeh--------hhHHHHHHHH
Confidence 54211 0 00000 001225566776 8888777644
No 105
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=93.91 E-value=0.058 Score=39.19 Aligned_cols=64 Identities=20% Similarity=0.405 Sum_probs=50.0
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHHH-hCC-CCCHHHHHHHHHHhCCC----CCCceeeccCCCCCHHHHHHHHHhcCC
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQC-LGE-DLSEEEIEDMIKEVDVD----GDGRIDFNGDGYFSFEEFVEIVYNMGA 207 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~~-~g~-~~~~~~~~~l~~~~D~~----~dG~I~~~~~g~~~~~EF~~~l~~~~~ 207 (324)
..+|..+-. +.+.||.++|..+|.. .+. .++.+.+..++..+..+ ..+.+++ ++|..+|.....
T Consensus 3 ~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~--------~gF~~fL~S~~N 72 (83)
T PF09279_consen 3 EEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTL--------EGFTRFLFSDEN 72 (83)
T ss_dssp HHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEH--------HHHHHHHHSTTC
T ss_pred HHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCH--------HHHHHHHCCCcC
Confidence 456777744 7889999999999974 343 57899999999988655 4688999 999999987653
No 106
>KOG1707|consensus
Probab=92.21 E-value=0.4 Score=47.05 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=46.3
Q ss_pred CChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCC----CHHHHHHHHHHhccCCCCCcceeHHHHHHHHH
Q psy9152 53 SPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFA----REEELQQMLEEVDINGKKAGNYSIMNHCGAVV 124 (324)
Q Consensus 53 ~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~----~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~ 124 (324)
+++.-++.+..+|..+|.|+||.++..|+..+....+..+ ...+.-. .+.. |.+++.-|+..+.
T Consensus 309 Ls~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~t~------~~~~--G~ltl~g~l~~Ws 376 (625)
T KOG1707|consen 309 LSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSSPYKDSTV------KNER--GWLTLNGFLSQWS 376 (625)
T ss_pred ccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCCcccccce------eccc--ceeehhhHHHHHH
Confidence 4556678999999999999999999999999998765332 1111111 2244 8899988887654
No 107
>KOG0042|consensus
Probab=92.20 E-value=0.41 Score=46.72 Aligned_cols=74 Identities=18% Similarity=0.128 Sum_probs=68.5
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
.+++++....+..|..+|.|+.|+++.....++|+..+..++...+..+++..|.+-. |.+...||.+.+....
T Consensus 586 ~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~--g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 586 KLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLN--GFVELREFLQLMSAIK 659 (680)
T ss_pred ccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhc--ceeeHHHHHHHHHHHh
Confidence 4678888999999999999999999999999999999989999999999999999888 9999999999988764
No 108
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=91.79 E-value=1 Score=37.31 Aligned_cols=38 Identities=13% Similarity=-0.025 Sum_probs=27.4
Q ss_pred cchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHH
Q psy9152 133 GWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEI 170 (324)
Q Consensus 133 ~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~ 170 (324)
.+++...-+|+|+||.|.+-|-.+.++.+|.++--..+
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~ 45 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLL 45 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHH
Confidence 34566777888888888888888888887766544433
No 109
>KOG1955|consensus
Probab=91.66 E-value=0.36 Score=46.14 Aligned_cols=69 Identities=22% Similarity=0.307 Sum_probs=48.3
Q ss_pred CCCHhhHHHHHHHHhhhccCCCchhH-HHHHHhhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy9152 5 NSPVFSIVEFKEAFRLFDKDGDGVQA-RHFRQFFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGR 83 (324)
Q Consensus 5 ~~~~~~~~~~~~~F~~~D~dgdG~I~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~ 83 (324)
++.+++++.+-.-|+.+-.|-+|+|+ ..-+.|+. .++-.+.+|..+|.+-|.++||.++..||+.
T Consensus 224 ~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFt--------------KSklpi~ELshIWeLsD~d~DGALtL~EFcA 289 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFT--------------KSKLPIEELSHIWELSDVDRDGALTLSEFCA 289 (737)
T ss_pred ccCHHHHHHHHhhhhcccCCcccccccHHHHhhhh--------------hccCchHHHHHHHhhcccCccccccHHHHHh
Confidence 45678888888888888888888887 22222222 1222456778888888888888888888888
Q ss_pred HHHH
Q psy9152 84 VMRS 87 (324)
Q Consensus 84 ~L~~ 87 (324)
++.-
T Consensus 290 AfHL 293 (737)
T KOG1955|consen 290 AFHL 293 (737)
T ss_pred hHhh
Confidence 7754
No 110
>KOG1029|consensus
Probab=90.85 E-value=0.35 Score=48.61 Aligned_cols=65 Identities=15% Similarity=0.246 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 57 LIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 57 ~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
....++++|..+|+..+|+++-..-+.+|-.. .++...+..+|...|.|+| |+++-+||+..|.-
T Consensus 193 ~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS--~Lpq~~LA~IW~LsDvd~D--GkL~~dEfilam~l 257 (1118)
T KOG1029|consen 193 NKLKYRQLFNALDKTRSGYLSGQQARSALGQS--GLPQNQLAHIWTLSDVDGD--GKLSADEFILAMHL 257 (1118)
T ss_pred hhhHHHHHhhhcccccccccccHHHHHHHHhc--CCchhhHhhheeeeccCCC--CcccHHHHHHHHHH
Confidence 45678899999999999999999999988654 4678889999999999999 99999999987654
No 111
>KOG1955|consensus
Probab=90.85 E-value=0.67 Score=44.41 Aligned_cols=71 Identities=18% Similarity=0.209 Sum_probs=61.6
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
..++++.+.+-..|+.+-.|-+|.|+-.--+.++.+. ++.-.++..+|...|.+.| |.++..||++.++-.
T Consensus 224 ~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKS--klpi~ELshIWeLsD~d~D--GALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKS--KLPIEELSHIWELSDVDRD--GALTLSEFCAAFHLV 294 (737)
T ss_pred ccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhc--cCchHHHHHHHhhcccCcc--ccccHHHHHhhHhhe
Confidence 3667788888889999999999999998888888764 4677899999999999999 999999999998654
No 112
>KOG0035|consensus
Probab=90.29 E-value=0.78 Score=47.37 Aligned_cols=108 Identities=16% Similarity=0.124 Sum_probs=81.9
Q ss_pred HHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCH-----HHHHHHHHHhccCCCCCcceeHHHHH
Q psy9152 46 TTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFARE-----EELQQMLEEVDINGKKAGNYSIMNHC 120 (324)
Q Consensus 46 ~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~-----~e~~~l~~~~D~d~d~~g~Is~~EF~ 120 (324)
........+.....+++..|..+++...|.++.+++..+|-.+|...-. .++..+....|.++- |.+++.+|.
T Consensus 734 l~R~sk~~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~--~qv~~~e~~ 811 (890)
T KOG0035|consen 734 LERDSKGTSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQ--GQVQLLEFE 811 (890)
T ss_pred HHhcccchhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccc--cceeHHHHH
Confidence 3444556666778999999999999999999999999999999977664 345566666788887 999999999
Q ss_pred HHHHhhhccCCC--cchhhhhccCCCCCCCcCHHHHHH
Q psy9152 121 GAVVNALDFGSG--GWWFKSKSGHKNYRGYISASDLRA 156 (324)
Q Consensus 121 ~~~~~~~~~~~~--~~~~~F~~~D~d~~G~Is~~El~~ 156 (324)
..+.+....... .+..+|..+-+++. +|..+||..
T Consensus 812 ddl~R~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 812 DDLEREYEDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hHhhhhhhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 999876543332 33456766655554 788888877
No 113
>KOG0035|consensus
Probab=89.17 E-value=2.2 Score=44.17 Aligned_cols=84 Identities=18% Similarity=0.104 Sum_probs=65.7
Q ss_pred cchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCH-----HHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCC
Q psy9152 133 GWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSE-----EEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGA 207 (324)
Q Consensus 133 ~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~-----~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~ 207 (324)
+++..|+.++....|.++.+++.++|-.+|.+.-. .+...++...|.+.-|.+++ .+|...|.....
T Consensus 748 ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~--------~e~~ddl~R~~e 819 (890)
T KOG0035|consen 748 ELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQL--------LEFEDDLEREYE 819 (890)
T ss_pred HHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeH--------HHHHhHhhhhhh
Confidence 45678999999999999999999999999987664 23444566677777788999 999999987654
Q ss_pred CCccchhHHhHHHHHHHHHHHhh
Q psy9152 208 TTEEKTADQEEKELRDAFREVED 230 (324)
Q Consensus 208 ~~~~~~~~~~~~~l~~aF~~~d~ 230 (324)
...+...+..+|+..-+
T Consensus 820 ------~l~~~~r~i~s~~d~~k 836 (890)
T KOG0035|consen 820 ------DLDTELRAILAFEDWAK 836 (890)
T ss_pred ------hhcHHHHHHHHHHHHHc
Confidence 33455677888887777
No 114
>KOG4578|consensus
Probab=86.32 E-value=0.62 Score=42.34 Aligned_cols=63 Identities=14% Similarity=0.139 Sum_probs=48.9
Q ss_pred hhhhccCCCCCCCcCHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 136 FKSKSGHKNYRGYISASDLRAVLQCLG-EDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 136 ~~F~~~D~d~~G~Is~~El~~~L~~~g-~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
--|..+|.|+++.|...|++.+=.-+- ..-...-...+++..|.|+|.+|++ .|++..+....
T Consensus 337 w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl--------~Ew~~CL~~~~ 400 (421)
T KOG4578|consen 337 WYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISL--------DEWRGCLGVEK 400 (421)
T ss_pred eeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecH--------HHHhhhhcccc
Confidence 349999999999999999766544322 1233445678999999999999999 99999887543
No 115
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=85.71 E-value=5.7 Score=32.54 Aligned_cols=63 Identities=13% Similarity=0.279 Sum_probs=47.7
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHhC---CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 62 KEAFRLFDKDGDGSITKEELGRVMRSLG---QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 62 ~~~F~~~D~d~dG~Is~~E~~~~L~~l~---~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
-..|..|-..+...++-..|.++++..+ ..++...+..+|..+-..+. ..|+|++|...+..+
T Consensus 5 F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~--~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 5 FKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGA--RKITFEQFLEALAEL 70 (154)
T ss_dssp HHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS---SEEEHHHHHHHHHHH
T ss_pred HHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCC--cccCHHHHHHHHHHH
Confidence 3344445556677899999999999865 45889999999999866666 789999999998765
No 116
>KOG3555|consensus
Probab=84.14 E-value=1.2 Score=40.90 Aligned_cols=99 Identities=12% Similarity=0.044 Sum_probs=73.1
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhCC---CCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCcch
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSLGQ---FAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGGWW 135 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~---~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~~~ 135 (324)
.+|+..|+.+=.+.++......+..+-..+.. ++-..++.=||..+|.|.| +.++-.|...+.... ...-++
T Consensus 211 ~RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~D--l~Ld~sEl~~I~ldk---nE~Cik 285 (434)
T KOG3555|consen 211 NRLRDWFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYD--LLLDQSELRAIELDK---NEACIK 285 (434)
T ss_pred HHHHHHHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccccc--cccCHHHhhhhhccC---chhHHH
Confidence 46778888876676666666666555333322 2345677889999999999 999999987776543 234567
Q ss_pred hhhhccCCCCCCCcCHHHHHHHHHHhC
Q psy9152 136 FKSKSGHKNYRGYISASDLRAVLQCLG 162 (324)
Q Consensus 136 ~~F~~~D~d~~G~Is~~El~~~L~~~g 162 (324)
..|...|...+|.||..|+-..+...+
T Consensus 286 pFfnsCD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 286 PFFNSCDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred HHHhhhcccccCccccchhhhhhccCC
Confidence 789999999999999999988887555
No 117
>KOG2243|consensus
Probab=83.85 E-value=1.5 Score=46.94 Aligned_cols=62 Identities=19% Similarity=0.313 Sum_probs=53.4
Q ss_pred hhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 136 FKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 136 ~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
..|+.||+||.|.||..+|.++|... ...+..+++-++.....+.+...+| ++|+.-+....
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~-k~ytqse~dfllscae~dend~~~y--------~dfv~rfhepa 4122 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCAEADENDMFDY--------EDFVDRFHEPA 4122 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhcc-ccchhHHHHHHHHhhccCccccccH--------HHHHHHhcCch
Confidence 46999999999999999999999743 3478889999999999988888888 99998887654
No 118
>KOG3866|consensus
Probab=83.50 E-value=4.6 Score=36.62 Aligned_cols=66 Identities=23% Similarity=0.261 Sum_probs=49.0
Q ss_pred chhhhhccCCCCCCCcCHHHHHHHHHH-h----CCCCCHHH-----------HHHHHHHhCCCCCCceeeccCCCCCHHH
Q psy9152 134 WWFKSKSGHKNYRGYISASDLRAVLQC-L----GEDLSEEE-----------IEDMIKEVDVDGDGRIDFNGDGYFSFEE 197 (324)
Q Consensus 134 ~~~~F~~~D~d~~G~Is~~El~~~L~~-~----g~~~~~~~-----------~~~l~~~~D~~~dG~I~~~~~g~~~~~E 197 (324)
-+..|...|.|++|+++-.||..++.. + ...-.++. -+.+++.+|+|.|.-|+. +|
T Consensus 246 PKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtl--------eE 317 (442)
T KOG3866|consen 246 PKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTL--------EE 317 (442)
T ss_pred cchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhH--------HH
Confidence 356789999999999999999888752 2 22211111 134788999999999999 99
Q ss_pred HHHHHHhcCC
Q psy9152 198 FVEIVYNMGA 207 (324)
Q Consensus 198 F~~~l~~~~~ 207 (324)
|++.-.....
T Consensus 318 FL~~t~~kef 327 (442)
T KOG3866|consen 318 FLNDTDNKEF 327 (442)
T ss_pred HHhhhhhccc
Confidence 9988766543
No 119
>KOG4578|consensus
Probab=83.07 E-value=0.57 Score=42.58 Aligned_cols=70 Identities=16% Similarity=0.102 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 56 FLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQF-AREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 56 ~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~-~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
++.+.+.-.|..+|+|+++.|...|++.+-.-+... -...=.+.+++..|.|+| ..|++.|+...+....
T Consensus 330 DeeRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkD--KkISl~Ew~~CL~~~~ 400 (421)
T KOG4578|consen 330 DEERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKD--KKISLDEWRGCLGVEK 400 (421)
T ss_pred ChhheeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCC--ceecHHHHhhhhcccc
Confidence 334456667888888888888888866544333211 122334567777788888 8888888877776543
No 120
>KOG2243|consensus
Probab=81.64 E-value=2.4 Score=45.57 Aligned_cols=59 Identities=17% Similarity=0.384 Sum_probs=50.0
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 64 AFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 64 ~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
.|+.+|+|+.|.|+..+|.+++... ...+..++.-++.-...+.+ ...+|++|+..+..
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~-k~ytqse~dfllscae~den--d~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCAEADEN--DMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhcc-ccchhHHHHHHHHhhccCcc--ccccHHHHHHHhcC
Confidence 4678899999999999999999764 34677888888888888888 99999999987654
No 121
>KOG3866|consensus
Probab=80.43 E-value=3.6 Score=37.26 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=16.0
Q ss_pred HHHhhhccCCCchhH-HHHHHhh
Q psy9152 16 EAFRLFDKDGDGVQA-RHFRQFF 37 (324)
Q Consensus 16 ~~F~~~D~dgdG~I~-~e~~~~~ 37 (324)
-.|.+.|.|+||+++ .||..++
T Consensus 248 TFF~LHD~NsDGfldeqELEaLF 270 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALF 270 (442)
T ss_pred hheeeeccCCcccccHHHHHHHH
Confidence 357889999999998 4554443
No 122
>KOG0998|consensus
Probab=80.39 E-value=1.3 Score=46.30 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=103.5
Q ss_pred CChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccC--
Q psy9152 53 SPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFG-- 130 (324)
Q Consensus 53 ~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~-- 130 (324)
.+..+...+..+|..+.+. +|.++....+.+|.. -.+....+.++|...|.+.+ |.++..||...++......
T Consensus 123 ~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~--s~Lp~~~l~~iw~l~d~d~~--g~Ld~~ef~~am~l~~~~l~~ 197 (847)
T KOG0998|consen 123 ITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLN--SKLPSDVLGRIWELSDIDKD--GNLDRDEFAVAMHLINDLLNG 197 (847)
T ss_pred CCHHHHHHHHHHHhccCCC-CCccccchhhhhhhc--CCCChhhhcccccccccccc--CCCChhhhhhhhhHHHHHhhc
Confidence 4455667888889999876 899999888888754 34677778889999999999 9999999988754321000
Q ss_pred ------------------------C-------------------------------------------------------
Q psy9152 131 ------------------------S------------------------------------------------------- 131 (324)
Q Consensus 131 ------------------------~------------------------------------------------------- 131 (324)
.
T Consensus 198 ~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~v 277 (847)
T KOG0998|consen 198 NSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKV 277 (847)
T ss_pred ccCCCCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccccccccCccc
Confidence 0
Q ss_pred -----CcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 132 -----GGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 132 -----~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
.....+|...|.+.+|.|+-.+....+...| ++...+..++...|..+.|.|++ .+|.-.+..+
T Consensus 278 sp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~g--l~~~~l~~~w~l~d~~n~~~ls~--------~ef~~~~~~~ 346 (847)
T KOG0998|consen 278 SPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLPFG--LSKPRLAHVWLLADTQNTGTLSK--------DEFALAMHLL 346 (847)
T ss_pred ChHHHHHHHHHHHhccccCCCcccccccccccccCC--CChhhhhhhhhhcchhccCcccc--------cccchhhhhh
Confidence 0012347888888889998888888876644 67777888888888888888888 8887766644
No 123
>PLN02952 phosphoinositide phospholipase C
Probab=79.70 E-value=6.4 Score=39.47 Aligned_cols=85 Identities=15% Similarity=0.037 Sum_probs=52.3
Q ss_pred cceeHHHHHHHHHhhhcc---CCCcchhhhhccCCCCCCCcCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------
Q psy9152 112 GNYSIMNHCGAVVNALDF---GSGGWWFKSKSGHKNYRGYISASDLRAVLQCL-GE-DLSEEEIEDMIKEVDVD------ 180 (324)
Q Consensus 112 g~Is~~EF~~~~~~~~~~---~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~-g~-~~~~~~~~~l~~~~D~~------ 180 (324)
|.++|.+|..+...+... ...++..+|..+-. +.+.++.++|..+|... +. ..+.+.+..++..+-..
T Consensus 15 g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~ 93 (599)
T PLN02952 15 GSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTR 93 (599)
T ss_pred CCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccc
Confidence 778888886665544311 23456777777743 34678888888888754 32 35666666666543111
Q ss_pred -CCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 181 -GDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 181 -~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
+.+.+++ +.|..+|...
T Consensus 94 ~~~~~l~~--------~~F~~~l~s~ 111 (599)
T PLN02952 94 YTRHGLNL--------DDFFHFLLYD 111 (599)
T ss_pred ccccCcCH--------HHHHHHHcCc
Confidence 1233555 9999998753
No 124
>KOG3555|consensus
Probab=78.87 E-value=3.7 Score=37.77 Aligned_cols=63 Identities=16% Similarity=0.150 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 57 LIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 57 ~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
=...+.-+|..+|.|.+|.++..||+.+-. .-.+.=++.+|...|...| |.|+-.||+-.+..
T Consensus 248 CKds~gWMFnklD~N~Dl~Ld~sEl~~I~l----dknE~CikpFfnsCD~~kD--g~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 248 CKDSLGWMFNKLDTNYDLLLDQSELRAIEL----DKNEACIKPFFNSCDTYKD--GSISTNEWCYCFQK 310 (434)
T ss_pred hhhhhhhhhhccccccccccCHHHhhhhhc----cCchhHHHHHHhhhccccc--Cccccchhhhhhcc
Confidence 346788899999999999999999977653 3355668889999999999 99999999988765
No 125
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=78.29 E-value=1.6 Score=30.58 Aligned_cols=56 Identities=21% Similarity=0.354 Sum_probs=36.0
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCC-----CCcceeHHHHHHH
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGK-----KAGNYSIMNHCGA 122 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d-----~~g~Is~~EF~~~ 122 (324)
+++.+.|+.+ .++.++|+..+|+..|.. ++++-+...+..-.+ .+|..+|..|+..
T Consensus 6 eqv~~aFr~l-A~~KpyVT~~dLr~~l~p-------e~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~ 66 (69)
T PF08726_consen 6 EQVEEAFRAL-AGGKPYVTEEDLRRSLTP-------EQAEYCISRMPPYEGPDGDAIPGAYDYESFTNS 66 (69)
T ss_dssp HHHHHHHHHH-CTSSSCEEHHHHHHHS-C-------CCHHHHHCCSEC--SSS----TTEEECHHHHCC
T ss_pred HHHHHHHHHH-HcCCCcccHHHHHHHcCc-------HHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHH
Confidence 5678899999 677899999999988742 222444443332221 1267899888753
No 126
>KOG0042|consensus
Probab=78.04 E-value=2.5 Score=41.51 Aligned_cols=64 Identities=16% Similarity=0.295 Sum_probs=58.6
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
+..|..+|.|+.|+++..+..++|+..+.+++.+.++.+++..|.+-.|.+.. .||...+....
T Consensus 596 ~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l--------~e~~q~~s~~~ 659 (680)
T KOG0042|consen 596 KTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVEL--------REFLQLMSAIK 659 (680)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeH--------HHHHHHHHHHh
Confidence 35689999999999999999999999888899999999999999999999999 99999888654
No 127
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=74.74 E-value=29 Score=25.61 Aligned_cols=63 Identities=14% Similarity=0.266 Sum_probs=41.1
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHh-------C----CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSL-------G----QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l-------~----~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
++++.+|..+ .|++|.++...|...|+.+ | ....+.-++..|... ... ..|+-++|+.++...
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~--~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLS--PKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT---S-B-HHHHHHHHHT-
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCC--CccCHHHHHHHHHhC
Confidence 6788899998 6789999999999988763 2 122566677777764 244 779999999988764
No 128
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=71.55 E-value=0.98 Score=31.62 Aligned_cols=55 Identities=22% Similarity=0.235 Sum_probs=37.2
Q ss_pred CCcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC-------CCceeeccCCCCCHHHHHHH
Q psy9152 131 SGGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDG-------DGRIDFNGDGYFSFEEFVEI 201 (324)
Q Consensus 131 ~~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~-------dG~I~~~~~g~~~~~EF~~~ 201 (324)
.+++..+|+.+ .++.++||.+||++.|. ++.++.+.+.+..-. .|.++| ..|+..
T Consensus 5 ~eqv~~aFr~l-A~~KpyVT~~dLr~~l~-------pe~aey~~~~Mp~~~~~~~~~~~~~~DY--------~~f~~~ 66 (69)
T PF08726_consen 5 AEQVEEAFRAL-AGGKPYVTEEDLRRSLT-------PEQAEYCISRMPPYEGPDGDAIPGAYDY--------ESFTNS 66 (69)
T ss_dssp CHHHHHHHHHH-CTSSSCEEHHHHHHHS--------CCCHHHHHCCSEC--SSS----TTEEEC--------HHHHCC
T ss_pred HHHHHHHHHHH-HcCCCcccHHHHHHHcC-------cHHHHHHHHHCcccCCCCcCCCCCCcCH--------HHHHHH
Confidence 45678889999 78899999999999873 223455555443222 266777 888743
No 129
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=70.20 E-value=16 Score=29.95 Aligned_cols=61 Identities=18% Similarity=0.342 Sum_probs=46.8
Q ss_pred hhccCCCCCCCcCHHHHHHHHHHhC---CCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 138 SKSGHKNYRGYISASDLRAVLQCLG---EDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 138 F~~~D~d~~G~Is~~El~~~L~~~g---~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
|..|-..+...++..-|..+|+..+ ..++...++.+|..+-..+..+|+| ++|+.+|....
T Consensus 8 f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f--------~~F~~aL~~lA 71 (154)
T PF05517_consen 8 FASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITF--------EQFLEALAELA 71 (154)
T ss_dssp HHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEH--------HHHHHHHHHHH
T ss_pred HHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCH--------HHHHHHHHHHH
Confidence 4444456777899999999999765 3689999999999986666778999 99999987654
No 130
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=68.44 E-value=41 Score=30.19 Aligned_cols=101 Identities=6% Similarity=0.076 Sum_probs=58.6
Q ss_pred CCCcccHHHHHHHHHHhC--CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCcc----hhhhhccCCCC
Q psy9152 72 GDGSITKEELGRVMRSLG--QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGGW----WFKSKSGHKNY 145 (324)
Q Consensus 72 ~dG~Is~~E~~~~L~~l~--~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~~----~~~F~~~D~d~ 145 (324)
-||.|+..|+. +.+.+- ..++..+-......+..... ...++.+|+..+.........-+ ...|...= -
T Consensus 68 ADG~Vse~Ei~-~~~~l~~~~~l~~~~r~~a~~lf~~~k~--~~~~l~~~~~~~~~~~~~r~~l~~~lL~~l~~vA~--A 142 (267)
T PRK09430 68 AKGRVTEADIR-IASQLMDRMNLHGEARRAAQQAFREGKE--PDFPLREKLRQFRSVCGGRFDLLRMFLEIQIQAAF--A 142 (267)
T ss_pred cCCCcCHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHhcc--cCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH--h
Confidence 47999999998 334331 34456653333444443344 55789999988877653322221 22344432 3
Q ss_pred CCCcCHHHHHHHHHHh-CCCCCHHHHHHHHHHh
Q psy9152 146 RGYISASDLRAVLQCL-GEDLSEEEIEDMIKEV 177 (324)
Q Consensus 146 ~G~Is~~El~~~L~~~-g~~~~~~~~~~l~~~~ 177 (324)
||.++..|-.-+.+-. ...++..+...+...+
T Consensus 143 DG~l~~~E~~~L~~Ia~~Lgis~~df~~~~~~~ 175 (267)
T PRK09430 143 DGSLHPNERQVLYVIAEELGFSRFQFDQLLRMM 175 (267)
T ss_pred cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5889999955444311 2347888877776654
No 131
>KOG1265|consensus
Probab=67.93 E-value=78 Score=33.29 Aligned_cols=125 Identities=11% Similarity=0.184 Sum_probs=83.5
Q ss_pred CCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhcc--CCC---CCcceeHHHHHHHHHhhhccCCCcchhhhhccCC
Q psy9152 69 DKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDI--NGK---KAGNYSIMNHCGAVVNALDFGSGGWWFKSKSGHK 143 (324)
Q Consensus 69 D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~--d~d---~~g~Is~~EF~~~~~~~~~~~~~~~~~~F~~~D~ 143 (324)
-.+..|+|....+.+.+..- -.+..++..+..... +.. +....+++-|..++..+.. ..++..+|..+-.
T Consensus 158 qvn~~grip~knI~k~F~~~---k~~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcp--R~eie~iF~ki~~ 232 (1189)
T KOG1265|consen 158 QVNFEGRIPVKNIIKTFSAD---KKEKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCP--RPEIEEIFRKISG 232 (1189)
T ss_pred cccccccccHHHHHHHhhcC---CchhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCC--chhHHHHHHHhcc
Confidence 45667888877776665432 222344444433321 111 0112456666666665542 2567889999999
Q ss_pred CCCCCcCHHHHHHHHHH------h----CCCCCHHHHHHHHHHhCCCC----CCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 144 NYRGYISASDLRAVLQC------L----GEDLSEEEIEDMIKEVDVDG----DGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 144 d~~G~Is~~El~~~L~~------~----g~~~~~~~~~~l~~~~D~~~----dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
++.-++|.++|..+|.. + -....+..+..|+..+..|+ .|+++- +-|++++....
T Consensus 233 ~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~--------dgf~ryl~gdE 301 (1189)
T KOG1265|consen 233 KKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMST--------DGFVRYLMGDE 301 (1189)
T ss_pred CCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccch--------hhhHHHhhCCc
Confidence 98899999999999974 2 24567888999999998775 467777 99999998743
No 132
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=66.85 E-value=22 Score=26.24 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=38.2
Q ss_pred HHHHHHHHhhhccCCCchhHH-HHHHhhccCchHHHHHHhhcCCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy9152 11 IVEFKEAFRLFDKDGDGVQAR-HFRQFFSFNNSFYTTTMLYSNSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRS 87 (324)
Q Consensus 11 ~~~~~~~F~~~D~dgdG~I~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~ 87 (324)
.+++|-+|.++ .|.+|.+++ .|..++.-.-..-........+.. -....+..|... ..+-.|+.++|-.+|..
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~-~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGY-IEPSVRSCFQQV--QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT---HHHHHHHHHHT--TT-S-B-HHHHHHHHHT
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccC-cHHHHHHHhccc--CCCCccCHHHHHHHHHh
Confidence 36799999999 799999994 355544321111111111111222 335667777765 34678999999999865
No 133
>KOG4347|consensus
Probab=65.98 E-value=5.6 Score=39.68 Aligned_cols=52 Identities=19% Similarity=0.106 Sum_probs=43.5
Q ss_pred hhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceee
Q psy9152 135 WFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDF 187 (324)
Q Consensus 135 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~ 187 (324)
..+|+.+|.+++|.|+..++...|..+...-..+.+.-+++.+|.+++ ..+.
T Consensus 558 ~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~ 609 (671)
T KOG4347|consen 558 ERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDR 609 (671)
T ss_pred HHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-cccc
Confidence 567999999999999999999999877655555668888999999888 7777
No 134
>PLN02952 phosphoinositide phospholipase C
Probab=61.63 E-value=46 Score=33.56 Aligned_cols=85 Identities=12% Similarity=0.030 Sum_probs=53.6
Q ss_pred CCCcccHHHHHHHHHHhC--CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccCCC---cchhhhhcc-----
Q psy9152 72 GDGSITKEELGRVMRSLG--QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSG---GWWFKSKSG----- 141 (324)
Q Consensus 72 ~dG~Is~~E~~~~L~~l~--~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~---~~~~~F~~~----- 141 (324)
+.|.+++.+|..+.+.+. ...+..++..+|..+- .+. +.++.++|..++......... ....++..+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~-~~~--~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~ 89 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFS-VGG--GHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRH 89 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHh-CCC--CccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcc
Confidence 357888888887777664 2346788888888883 444 678888888888776543211 122232211
Q ss_pred --CCCCCCCcCHHHHHHHHH
Q psy9152 142 --HKNYRGYISASDLRAVLQ 159 (324)
Q Consensus 142 --D~d~~G~Is~~El~~~L~ 159 (324)
...+.+.++.+.|..+|.
T Consensus 90 ~~~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 90 HVTRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred ccccccccCcCHHHHHHHHc
Confidence 112334588888888775
No 135
>KOG0998|consensus
Probab=59.59 E-value=5 Score=42.16 Aligned_cols=72 Identities=19% Similarity=0.147 Sum_probs=62.0
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhh
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNAL 127 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~ 127 (324)
..++.....+.++|...|.+.+|.|+..+....+.. ..+....+..+|...|..+. |.+++.+|+..+..+.
T Consensus 276 ~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~--~gl~~~~l~~~w~l~d~~n~--~~ls~~ef~~~~~~~~ 347 (847)
T KOG0998|consen 276 KVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLP--FGLSKPRLAHVWLLADTQNT--GTLSKDEFALAMHLLE 347 (847)
T ss_pred ccChHHHHHHHHHHHhccccCCCccccccccccccc--CCCChhhhhhhhhhcchhcc--Ccccccccchhhhhhh
Confidence 456667788889999999999999999999988866 56788899999999999999 9999999988776543
No 136
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=59.25 E-value=48 Score=26.15 Aligned_cols=80 Identities=18% Similarity=0.156 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhCCCC--CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeH-----HHHHHHHHhhhcc
Q psy9152 57 LIVEFKEAFRLFDKDG--DGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSI-----MNHCGAVVNALDF 129 (324)
Q Consensus 57 ~~~~l~~~F~~~D~d~--dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~-----~EF~~~~~~~~~~ 129 (324)
.+..+.++|+....+. +..++..++..+|..+ |........ ...+. +.-+..+..
T Consensus 39 ~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~i------------y~~l~~~~p--~~~~i~~~~v~~a~~L~ln---- 100 (127)
T PF09068_consen 39 DLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSI------------YEFLNKRLP--TLHQIPSRPVDLAVDLLLN---- 100 (127)
T ss_dssp -HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHH------------HHHHHHHST--TS--HH-----HHHHHHHH----
T ss_pred eHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHH------------HHHHHHHCC--CCCCCCchhHHHHHHHHHH----
Confidence 4556667777766433 4668888888877653 322222111 22221 122333222
Q ss_pred CCCcchhhhhccCCCCCCCcCHHHHHHHHHH
Q psy9152 130 GSGGWWFKSKSGHKNYRGYISASDLRAVLQC 160 (324)
Q Consensus 130 ~~~~~~~~F~~~D~d~~G~Is~~El~~~L~~ 160 (324)
-....||++++|.|+.-.++.+|..
T Consensus 101 ------~Ll~vyD~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 101 ------WLLNVYDSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp ------HHHHHH-TT--SEEEHHHHHHHHHH
T ss_pred ------HHHHHhCCCCCCeeehhHHHHHHHH
Confidence 2467778888888888888877753
No 137
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=57.22 E-value=9.6 Score=29.45 Aligned_cols=32 Identities=16% Similarity=0.352 Sum_probs=23.7
Q ss_pred CCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHh
Q psy9152 92 AREEELQQMLEEVDINGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 92 ~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~ 125 (324)
+++++++.+|..+-.|.. |++.|.||+..+..
T Consensus 4 LtDeQFdrLW~e~Pvn~~--GrLkY~eFL~kfs~ 35 (118)
T PF08976_consen 4 LTDEQFDRLWNEMPVNAK--GRLKYQEFLSKFSS 35 (118)
T ss_dssp --HHHHHHHHTTS-B-TT--S-EEHHHHHHHT--
T ss_pred ccHHHhhhhhhhCcCCcc--CCEeHHHHHHHccc
Confidence 688999999999999999 99999999998764
No 138
>KOG4347|consensus
Probab=57.14 E-value=15 Score=36.84 Aligned_cols=76 Identities=11% Similarity=-0.030 Sum_probs=58.9
Q ss_pred ccHHHHHHHHHHhC-CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhcc-CCCcchhhhhccCCCCCCCcCHHH
Q psy9152 76 ITKEELGRVMRSLG-QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDF-GSGGWWFKSKSGHKNYRGYISASD 153 (324)
Q Consensus 76 Is~~E~~~~L~~l~-~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~-~~~~~~~~F~~~D~d~~G~Is~~E 153 (324)
|++..+..+.+.+. ...+..-...+|...|.+++ |.++|.+++..+..+... ..+.+.-.|+.+|.+++ ....+|
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~--g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~ 611 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMT--GLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREE 611 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCc--ceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-cccccc
Confidence 45566666665543 22455567899999999999 999999999998876543 24667788999999999 999998
Q ss_pred H
Q psy9152 154 L 154 (324)
Q Consensus 154 l 154 (324)
.
T Consensus 612 ~ 612 (671)
T KOG4347|consen 612 V 612 (671)
T ss_pred c
Confidence 8
No 139
>KOG1264|consensus
Probab=49.68 E-value=61 Score=33.71 Aligned_cols=142 Identities=10% Similarity=0.137 Sum_probs=83.1
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHH-HHHHHhccCCCCCcceeHHHHHHHHHhhhccCCCcchhh
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQ-QMLEEVDINGKKAGNYSIMNHCGAVVNALDFGSGGWWFK 137 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~-~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~~~~~~~~ 137 (324)
.-++..+-..|...-..|+..+++..|......++..... +-+.. |.-.. +.++|+.|..+...++-........-
T Consensus 144 ~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~~~kfl~e~~te-d~~~k--~dlsf~~f~~ly~~lmfs~~~a~l~e 220 (1267)
T KOG1264|consen 144 RWLRKQIYSVDQTRENSISARDLKTILPQVNFKVSSAKFLKEKFTE-DGARK--DDLSFEQFHLLYKKLMFSQQKAILLE 220 (1267)
T ss_pred HHHHhhheeccchhhhheeHHhhhcccccceEEechHHHHHHHHhH-hhhcc--ccccHHHHHHHHHHHhhccchhhhhc
Confidence 4456677778876667799999999998766655543322 22222 22334 78999999998877653332222222
Q ss_pred h------hccCCCCCCCcCHHHHHHHHHHhCCC---CCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcC
Q psy9152 138 S------KSGHKNYRGYISASDLRAVLQCLGED---LSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMG 206 (324)
Q Consensus 138 F------~~~D~d~~G~Is~~El~~~L~~~g~~---~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~ 206 (324)
| ..-+...--.++..||+++|..-... .....+..+++.|-.|--+.+ .++.+...||+.++-...
T Consensus 221 ~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~---~EPyl~v~EFv~fLFSre 295 (1267)
T KOG1264|consen 221 FKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRET---AEPYLFVDEFVTFLFSRE 295 (1267)
T ss_pred ccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhc---cCcceeHHHHHHHHhhcc
Confidence 2 12222233579999999999743211 122246666666644322211 223344599999987653
No 140
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=47.47 E-value=1.1e+02 Score=22.35 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=29.1
Q ss_pred CCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCC
Q psy9152 147 GYISASDLRAVLQCLGEDLSEEEIEDMIKEVDV 179 (324)
Q Consensus 147 G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~ 179 (324)
..||..||...-+..+.++++.+++.++..+-.
T Consensus 13 n~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~ 45 (85)
T PF11116_consen 13 NNITAKELLKYSKQYNISITKKQAEQIANILRG 45 (85)
T ss_pred hcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhc
Confidence 469999999999999999999999999888743
No 141
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=47.24 E-value=15 Score=28.41 Aligned_cols=33 Identities=24% Similarity=0.595 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 165 LSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 165 ~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
+++++++.+...+-.|..|.|.| .||+.-+...
T Consensus 4 LtDeQFdrLW~e~Pvn~~GrLkY--------~eFL~kfs~e 36 (118)
T PF08976_consen 4 LTDEQFDRLWNEMPVNAKGRLKY--------QEFLSKFSSE 36 (118)
T ss_dssp --HHHHHHHHTTS-B-TTS-EEH--------HHHHHHT---
T ss_pred ccHHHhhhhhhhCcCCccCCEeH--------HHHHHHcccc
Confidence 78999999999999999999999 9999888743
No 142
>KOG3449|consensus
Probab=44.67 E-value=1.2e+02 Score=23.31 Aligned_cols=54 Identities=22% Similarity=0.374 Sum_probs=44.6
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHH
Q psy9152 62 KEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGA 122 (324)
Q Consensus 62 ~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~ 122 (324)
...|-+++.-++-..+..+++++|...|.....+.++.++..+. |+ +.+|.+..
T Consensus 4 vaAYLL~~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel~------GK-~i~ElIA~ 57 (112)
T KOG3449|consen 4 VAAYLLAVLGGNASPSASDIKKILESVGAEIDDERINLVLSELK------GK-DIEELIAA 57 (112)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHhc------CC-CHHHHHHH
Confidence 45566777777888899999999999999999999999999873 55 77777664
No 143
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=43.01 E-value=27 Score=25.99 Aligned_cols=81 Identities=15% Similarity=0.108 Sum_probs=47.1
Q ss_pred CCcccHHHHHHHHHHhC--CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccC--CCcchhhhhccCCCCCCC
Q psy9152 73 DGSITKEELGRVMRSLG--QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFG--SGGWWFKSKSGHKNYRGY 148 (324)
Q Consensus 73 dG~Is~~E~~~~L~~l~--~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~--~~~~~~~F~~~D~d~~G~ 148 (324)
||.++..|...+-..+. ..++..+...++..+..... ...++.+|...+....... ..-+..+|... --||.
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA--~ADG~ 88 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEE--EAPDLYEFTSLIKEHFDYEERLELVEALWEVA--YADGE 88 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH--hCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHH--HhcCC
Confidence 68888888776554432 24567777777777765555 6678888888776543110 01112234433 23567
Q ss_pred cCHHHHHHH
Q psy9152 149 ISASDLRAV 157 (324)
Q Consensus 149 Is~~El~~~ 157 (324)
++..|-.-+
T Consensus 89 ~~~~E~~~l 97 (104)
T cd07313 89 LDEYEEHLI 97 (104)
T ss_pred CCHHHHHHH
Confidence 777765433
No 144
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=43.01 E-value=45 Score=22.89 Aligned_cols=39 Identities=21% Similarity=0.345 Sum_probs=28.6
Q ss_pred hccCCCCCCCcCHHHHHHHHHH----------hCCCCCHHHHHHHHHHh
Q psy9152 139 KSGHKNYRGYISASDLRAVLQC----------LGEDLSEEEIEDMIKEV 177 (324)
Q Consensus 139 ~~~D~d~~G~Is~~El~~~L~~----------~g~~~~~~~~~~l~~~~ 177 (324)
+.||...+.+|+.+++.++... .|..+|...+..++..-
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~g~~~~V~D~ktgeDiT~~iL~QIi~e~ 58 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVREGEDFKVVDAKTGEDITRSILLQIILEE 58 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHCCCeEEEEECCCCcccHHHHHHHHHHHH
Confidence 5678888889999999888863 25667777766666544
No 145
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=42.74 E-value=40 Score=17.65 Aligned_cols=16 Identities=31% Similarity=0.335 Sum_probs=9.7
Q ss_pred CCCCCCCcCHHHHHHH
Q psy9152 142 HKNYRGYISASDLRAV 157 (324)
Q Consensus 142 D~d~~G~Is~~El~~~ 157 (324)
|.|++|.|+.-++..+
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 4567777777666543
No 146
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=39.95 E-value=1.1e+02 Score=22.66 Aligned_cols=53 Identities=19% Similarity=0.259 Sum_probs=37.5
Q ss_pred CCCCcCHHHHHHHHHHhC--CCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 145 YRGYISASDLRAVLQCLG--EDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 145 ~~G~Is~~El~~~L~~~g--~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
-||.++..|...+-.-+. ..+++.+...++..+........++ .+|.+.+...
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~ 66 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDL--------YEFTSLIKEH 66 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCH--------HHHHHHHHHh
Confidence 378999999776654321 2478888888888876655556677 8888877654
No 147
>PTZ00373 60S Acidic ribosomal protein P2; Provisional
Probab=35.73 E-value=1.8e+02 Score=22.50 Aligned_cols=53 Identities=13% Similarity=0.209 Sum_probs=41.3
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHH
Q psy9152 62 KEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCG 121 (324)
Q Consensus 62 ~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~ 121 (324)
-..|.+.-.-++..+|.+++.++|...|.......+..+++.+ ...+.+|.+.
T Consensus 6 vaAYlL~~lgG~~~pTaddI~kIL~AaGveVd~~~~~l~~~~L-------~GKdI~ELIa 58 (112)
T PTZ00373 6 VAAYLMCVLGGNENPTKKEVKNVLSAVNADVEDDVLDNFFKSL-------EGKTPHELIA 58 (112)
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHH-------cCCCHHHHHH
Confidence 3445555556677899999999999999999999999998887 3456677665
No 148
>KOG2871|consensus
Probab=35.64 E-value=51 Score=30.93 Aligned_cols=64 Identities=17% Similarity=0.300 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHH-HHhccCCCCCcceeHHHHHHH
Q psy9152 57 LIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQML-EEVDINGKKAGNYSIMNHCGA 122 (324)
Q Consensus 57 ~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~-~~~D~d~d~~g~Is~~EF~~~ 122 (324)
...++++.|+.+|+.++|+|+..-++.++..+....++...-.++ ..+|+.+- |.|-...|...
T Consensus 307 ~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~--~iil~~d~lg~ 371 (449)
T KOG2871|consen 307 PSEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESL--GIILLEDFLGE 371 (449)
T ss_pred CCHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhc--ceEEecccccc
Confidence 357889999999999999999999999998877444444433333 23455544 55544444443
No 149
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=35.39 E-value=2e+02 Score=21.93 Aligned_cols=48 Identities=19% Similarity=0.394 Sum_probs=32.7
Q ss_pred hccCCCCCCCcCHHHHHHHHHH----------hCCCCCHHHHHHHHHHhCCCCCCcee
Q psy9152 139 KSGHKNYRGYISASDLRAVLQC----------LGEDLSEEEIEDMIKEVDVDGDGRID 186 (324)
Q Consensus 139 ~~~D~d~~G~Is~~El~~~L~~----------~g~~~~~~~~~~l~~~~D~~~dG~I~ 186 (324)
+.||+..+-+|+.++++++... .|..+|...+-.|+-.-...+...++
T Consensus 10 RLYDT~tS~YITLedi~~lV~~g~~f~V~DakTgeDiT~~iL~QII~E~E~~g~~~lp 67 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVREGREFQVVDSKSGDDLTRSILLQIIAEEESGGEPVLS 67 (107)
T ss_pred cccCCCccceeeHHHHHHHHHCCCeEEEEECCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 4678888888888888888763 25667777777777666554443333
No 150
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=32.89 E-value=1.3e+02 Score=24.14 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=17.8
Q ss_pred CCcCHHHHHHHHHH-hCCCCCHHHHHHHHHHhC
Q psy9152 147 GYISASDLRAVLQC-LGEDLSEEEIEDMIKEVD 178 (324)
Q Consensus 147 G~Is~~El~~~L~~-~g~~~~~~~~~~l~~~~D 178 (324)
+.|+.+-|+.+|+. +...++.+-+..+|..|-
T Consensus 47 ~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~ 79 (138)
T PF14513_consen 47 EPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQ 79 (138)
T ss_dssp TEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS-
T ss_pred CCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 36777777777763 455566666677776663
No 151
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.56 E-value=99 Score=24.93 Aligned_cols=90 Identities=16% Similarity=0.153 Sum_probs=0.0
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhC--CCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhccC--CCcchhhhh
Q psy9152 64 AFRLFDKDGDGSITKEELGRVMRSLG--QFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDFG--SGGWWFKSK 139 (324)
Q Consensus 64 ~F~~~D~d~dG~Is~~E~~~~L~~l~--~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~~--~~~~~~~F~ 139 (324)
+|+.+..| |.++..|...+..-+. ..++..++..++.....-+. ..+++-.|...+.+.+... .+-+..++.
T Consensus 35 lf~Vm~AD--G~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~--Ea~d~y~fts~l~r~Ld~e~R~eli~~mwe 110 (148)
T COG4103 35 LFHVMEAD--GTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGY--EAIDLYSFTSVLKRHLDEEQRLELIGLMWE 110 (148)
T ss_pred HHHHHhcc--cCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q ss_pred ccCCCCCCCcCHHHHHHHHH
Q psy9152 140 SGHKNYRGYISASDLRAVLQ 159 (324)
Q Consensus 140 ~~D~d~~G~Is~~El~~~L~ 159 (324)
.. ..||.++..|-.-+++
T Consensus 111 Ia--~ADg~l~e~Ed~vi~R 128 (148)
T COG4103 111 IA--YADGELDESEDHVIWR 128 (148)
T ss_pred HH--HccccccHHHHHHHHH
No 152
>KOG2871|consensus
Probab=31.84 E-value=36 Score=31.91 Aligned_cols=56 Identities=20% Similarity=0.187 Sum_probs=41.2
Q ss_pred CcchhhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHH-HHhCCCCCCceee
Q psy9152 132 GGWWFKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMI-KEVDVDGDGRIDF 187 (324)
Q Consensus 132 ~~~~~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~-~~~D~~~dG~I~~ 187 (324)
+.++.+|+.+|+.++|+|+..-++.+|..+...+++...-.++ ..+|..+-|.|-.
T Consensus 309 ~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~ 365 (449)
T KOG2871|consen 309 EQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILL 365 (449)
T ss_pred HHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEe
Confidence 4567889999999999999999999999887545544333333 4466666666666
No 153
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=31.27 E-value=1.4e+02 Score=20.73 Aligned_cols=31 Identities=16% Similarity=0.366 Sum_probs=19.9
Q ss_pred cCHHHHHHHHHHhCCCCCHHHHHHHHHHhCC
Q psy9152 149 ISASDLRAVLQCLGEDLSEEEIEDMIKEVDV 179 (324)
Q Consensus 149 Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~ 179 (324)
++-+++..++...|..+++.++..+++.-+.
T Consensus 14 l~d~~m~~if~l~~~~vs~~el~a~lrke~~ 44 (68)
T PF07308_consen 14 LKDDDMIEIFALAGFEVSKAELSAWLRKEDE 44 (68)
T ss_pred CChHHHHHHHHHcCCccCHHHHHHHHCCCCC
Confidence 4455666666666677777777777766433
No 154
>KOG1954|consensus
Probab=28.95 E-value=1e+02 Score=29.29 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=41.0
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHH
Q psy9152 60 EFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGA 122 (324)
Q Consensus 60 ~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~ 122 (324)
.+.++|..+.+- +|+|+-..-++.|- +..+++..+-++|+..|.+.| |.++-+||...
T Consensus 445 ~yde~fy~l~p~-~gk~sg~~ak~~mv--~sklpnsvlgkiwklad~d~d--g~ld~eefala 502 (532)
T KOG1954|consen 445 TYDEIFYTLSPV-NGKLSGRNAKKEMV--KSKLPNSVLGKIWKLADIDKD--GMLDDEEFALA 502 (532)
T ss_pred chHhhhhccccc-CceeccchhHHHHH--hccCchhHHHhhhhhhcCCcc--cCcCHHHHHHH
Confidence 345666666553 67787776666553 345677788888888888888 88888888654
No 155
>cd05833 Ribosomal_P2 Ribosomal protein P2. This subfamily represents the eukaryotic large ribosomal protein P2. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P2 is located in the L12 stalk, with proteins P1, P0, L11, and 28S rRNA. P1 and P2 are the only proteins in the ribosome to occur as multimers, always appearing as sets of heterodimers. Recent data indicate that eukaryotes have four copies (two heterodimers), while most archaeal species contain six copies of L12p (three homodimers). Bacteria may have four or six copies of L7/L12 (two or three homodimers) depending on the species. Experiments using S. cerevisiae P1 and P2 indicate that P1 proteins are positioned more internally with limited reactivity in the C-terminal domains, while P2 proteins seem to be more externally located and are more likely to interact with other cellular components. In lower eukaryotes, P1 and P2 are further subdivided into P1A, P1B, P2
Probab=28.04 E-value=2.8e+02 Score=21.26 Aligned_cols=57 Identities=18% Similarity=0.278 Sum_probs=43.6
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhh
Q psy9152 63 EAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 63 ~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~ 126 (324)
..|.+.-..++..+|.+++..+|...|.......+..+++.+ ...+..+.+..-...
T Consensus 5 aAylL~~l~g~~~pTa~dI~~IL~AaGveVe~~~~~lf~~~L-------~GKdi~eLIa~g~~k 61 (109)
T cd05833 5 AAYLLAVLGGNASPSAADVKKILGSVGVEVDDEKLNKVISEL-------EGKDVEELIAAGKEK 61 (109)
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHH-------cCCCHHHHHHHhHhh
Confidence 344455556777899999999999999999999999888887 335677777765443
No 156
>TIGR01639 P_fal_TIGR01639 Plasmodium falciparum uncharacterized domain TIGR01639. This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.
Probab=27.92 E-value=1.3e+02 Score=20.28 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=23.2
Q ss_pred CCcCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 147 GYISASDLRAVLQCLGEDLSEEEIEDMIKEV 177 (324)
Q Consensus 147 G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~ 177 (324)
-.+|.+|+...+..++..++..++..++..+
T Consensus 8 ~~lTeEEl~~~i~~L~~~~~~~dm~~IW~~v 38 (61)
T TIGR01639 8 KKLSKEELNELINSLDEIPNRNDMLIIWNQV 38 (61)
T ss_pred HHccHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 3577888888888887777777777777655
No 157
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=27.80 E-value=1.3e+02 Score=20.61 Aligned_cols=32 Identities=19% Similarity=0.439 Sum_probs=28.7
Q ss_pred CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 73 DGSITKEELGRVMRSLGQFAREEELQQMLEEV 104 (324)
Q Consensus 73 dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~ 104 (324)
+=-|+.+-++..+...|..+++..++.+++..
T Consensus 29 NPpine~mir~M~~QMG~kpSekqi~Q~m~~m 60 (64)
T PF03672_consen 29 NPPINEKMIRAMMMQMGRKPSEKQIKQMMRSM 60 (64)
T ss_pred CCCCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 45789999999999999999999999998775
No 158
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=26.76 E-value=2e+02 Score=19.91 Aligned_cols=25 Identities=16% Similarity=0.185 Sum_probs=13.4
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 80 ELGRVMRSLGQFAREEELQQMLEEV 104 (324)
Q Consensus 80 E~~~~L~~l~~~~~~~e~~~l~~~~ 104 (324)
++..++...+..++..++..+++.-
T Consensus 18 ~m~~if~l~~~~vs~~el~a~lrke 42 (68)
T PF07308_consen 18 DMIEIFALAGFEVSKAELSAWLRKE 42 (68)
T ss_pred HHHHHHHHcCCccCHHHHHHHHCCC
Confidence 4555555555555555555555543
No 159
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=25.77 E-value=1.7e+02 Score=18.32 Aligned_cols=30 Identities=17% Similarity=0.429 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhCC-C-CCCcccHHHHHHHHHH
Q psy9152 58 IVEFKEAFRLFDK-D-GDGSITKEELGRVMRS 87 (324)
Q Consensus 58 ~~~l~~~F~~~D~-d-~dG~Is~~E~~~~L~~ 87 (324)
+..+-.+|+.|-. + ...+++..||+.+|..
T Consensus 5 i~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 5 IETIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 4556677877752 2 3578999999998865
No 160
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=25.37 E-value=54 Score=22.96 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=36.1
Q ss_pred CCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeeccCCCCCHHHHHHHHHhcCC
Q psy9152 146 RGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRIDFNGDGYFSFEEFVEIVYNMGA 207 (324)
Q Consensus 146 ~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~dG~I~~~~~g~~~~~EF~~~l~~~~~ 207 (324)
+-.++..-|-.+|. ..++...+..+...|+.=..++|+- +||++.++...+
T Consensus 6 sp~~~F~~L~~~l~---~~l~~~~~~~l~~~Y~~~k~~kIsR--------~~fvr~lR~IVG 56 (70)
T PF12174_consen 6 SPWMPFPMLFSALS---KHLPPSKMDLLQKHYEEFKKKKISR--------EEFVRKLRQIVG 56 (70)
T ss_pred CCcccHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHCCCCH--------HHHHHHHHHHHH
Confidence 34455555555554 4466677777777777667888999 999999987653
No 161
>PF05872 DUF853: Bacterial protein of unknown function (DUF853); InterPro: IPR008571 Members of this family have a P-loop containing nucleotide triphosphate hydrolases fold. This family is restricted to bacterial proteins, none of which have currently been characterised.
Probab=25.37 E-value=1.9e+02 Score=28.26 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=64.4
Q ss_pred CCChhHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhc---
Q psy9152 52 NSPVFLIVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALD--- 128 (324)
Q Consensus 52 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~--- 128 (324)
.+++.+..-|.-+|+..|.++==.|+..+|+.+|.-++. .-..+...| |.|+-..-=.....+..
T Consensus 121 ~LNdtQ~gvL~i~F~~ADd~gLlLlDLkDLra~l~~v~e-----~~~e~~~~y-------G~is~aS~gaI~R~ll~LE~ 188 (502)
T PF05872_consen 121 ELNDTQEGVLNIVFRIADDEGLLLLDLKDLRAMLQYVSE-----NAKELSAEY-------GNISSASIGAIQRALLVLEQ 188 (502)
T ss_pred ccchHHHHHHHHHHHHhccCCCccccHHHHHHHHHHHHh-----hHHHHHHHc-------CCccHHHHHHHHHHHHHHHH
Confidence 467777888999999999988888999999999987743 223444444 77877765444444331
Q ss_pred cCCCc-------chhhhhccCCCCCCCcCHHHHHHHHH
Q psy9152 129 FGSGG-------WWFKSKSGHKNYRGYISASDLRAVLQ 159 (324)
Q Consensus 129 ~~~~~-------~~~~F~~~D~d~~G~Is~~El~~~L~ 159 (324)
++.+. ...-|-..|.+|.|.|+.=+...++.
T Consensus 189 qG~d~FFGEPaldi~Dl~r~~~~GrG~IniL~a~~l~~ 226 (502)
T PF05872_consen 189 QGGDQFFGEPALDIEDLMRTDADGRGVINILAADKLMN 226 (502)
T ss_pred cchHhhCCCccCCHHHHhccCCCCCEEEEEEEhHhhhh
Confidence 21111 11224566789999998877666654
No 162
>TIGR01639 P_fal_TIGR01639 Plasmodium falciparum uncharacterized domain TIGR01639. This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.
Probab=24.98 E-value=1.6e+02 Score=19.89 Aligned_cols=32 Identities=22% Similarity=0.463 Sum_probs=26.8
Q ss_pred CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 73 DGSITKEELGRVMRSLGQFAREEELQQMLEEV 104 (324)
Q Consensus 73 dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~ 104 (324)
+-.+|.+|+...+..++..++..++-.+|..+
T Consensus 7 s~~lTeEEl~~~i~~L~~~~~~~dm~~IW~~v 38 (61)
T TIGR01639 7 SKKLSKEELNELINSLDEIPNRNDMLIIWNQV 38 (61)
T ss_pred hHHccHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 34688899999999999888988888888765
No 163
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=24.97 E-value=1.1e+02 Score=20.91 Aligned_cols=37 Identities=27% Similarity=0.428 Sum_probs=32.3
Q ss_pred CCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Q psy9152 145 YRGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVDG 181 (324)
Q Consensus 145 ~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~~ 181 (324)
.++.++..++.+.|...|..++...+..-++.++.++
T Consensus 10 ~~~P~g~~~l~~~L~~~g~~~se~avRrrLr~me~~G 46 (66)
T PF08461_consen 10 SDKPLGRKQLAEELKLRGEELSEEAVRRRLRAMERDG 46 (66)
T ss_pred cCCCCCHHHHHHHHHhcChhhhHHHHHHHHHHHHHCC
Confidence 4678999999999998899999999999999987765
No 164
>PRK00523 hypothetical protein; Provisional
Probab=24.33 E-value=1.6e+02 Score=20.73 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=28.9
Q ss_pred CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 73 DGSITKEELGRVMRSLGQFAREEELQQMLEEV 104 (324)
Q Consensus 73 dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~ 104 (324)
+=.|+.+-++..+...|.++++..++++++..
T Consensus 37 NPpine~mir~M~~QMGqKPSekki~Q~m~~m 68 (72)
T PRK00523 37 NPPITENMIRAMYMQMGRKPSESQIKQVMRSV 68 (72)
T ss_pred CcCCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 45789999999999999999999999998876
No 165
>PLN02222 phosphoinositide phospholipase C 2
Probab=24.13 E-value=2.7e+02 Score=28.09 Aligned_cols=63 Identities=16% Similarity=0.270 Sum_probs=46.8
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhCC--CCCHHHHHHHHHHhcc-CCCCCcceeHHHHHHHHHh
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSLGQ--FAREEELQQMLEEVDI-NGKKAGNYSIMNHCGAVVN 125 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~--~~~~~e~~~l~~~~D~-d~d~~g~Is~~EF~~~~~~ 125 (324)
.++..+|..+-. ++.++.++|..+|..... ..+.+.+..++..+.. -.. +.++++.|..++..
T Consensus 25 ~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~--~~~~~~gF~~yL~s 90 (581)
T PLN02222 25 REIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHR--NGLHLDAFFKYLFG 90 (581)
T ss_pred HHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhc--cCcCHHHHHHHhcC
Confidence 466777777753 479999999999987643 3567778888887632 234 77999999999865
No 166
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=23.65 E-value=1.3e+02 Score=20.68 Aligned_cols=37 Identities=19% Similarity=0.400 Sum_probs=31.2
Q ss_pred CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhccCC
Q psy9152 72 GDGSITKEELGRVMRSLGQFAREEELQQMLEEVDING 108 (324)
Q Consensus 72 ~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~d~ 108 (324)
.++.++..++...|..-|..+++..+...++.++.+|
T Consensus 10 ~~~P~g~~~l~~~L~~~g~~~se~avRrrLr~me~~G 46 (66)
T PF08461_consen 10 SDKPLGRKQLAEELKLRGEELSEEAVRRRLRAMERDG 46 (66)
T ss_pred cCCCCCHHHHHHHHHhcChhhhHHHHHHHHHHHHHCC
Confidence 4578899999999988888899999999998887663
No 167
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=23.60 E-value=1.6e+02 Score=23.59 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=23.3
Q ss_pred CCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHhcc
Q psy9152 72 GDGSITKEELGRVMRS-LGQFAREEELQQMLEEVDI 106 (324)
Q Consensus 72 ~dG~Is~~E~~~~L~~-l~~~~~~~e~~~l~~~~D~ 106 (324)
..+.|+++-|+.+|+. +...++++-+..+|..+-.
T Consensus 45 ~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~ 80 (138)
T PF14513_consen 45 PEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQK 80 (138)
T ss_dssp ETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS--
T ss_pred CCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC
Confidence 3468999999999887 5566888888888888743
No 168
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=22.80 E-value=40 Score=26.48 Aligned_cols=78 Identities=17% Similarity=0.144 Sum_probs=43.8
Q ss_pred CCCcccHHHHHHHHHHh--CCCCCHHHHHHHHHHhccCCCCCcceeHHHHHHHHHhhhcc--CCCcchhhhhccCCCCCC
Q psy9152 72 GDGSITKEELGRVMRSL--GQFAREEELQQMLEEVDINGKKAGNYSIMNHCGAVVNALDF--GSGGWWFKSKSGHKNYRG 147 (324)
Q Consensus 72 ~dG~Is~~E~~~~L~~l--~~~~~~~e~~~l~~~~D~d~d~~g~Is~~EF~~~~~~~~~~--~~~~~~~~F~~~D~d~~G 147 (324)
-||.++..|...+...+ ...++......+...++.-.. ..+++.+++..+...... ...-+..++...-.| |
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~r~~ll~~l~~ia~AD--G 111 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFGLSPEEAEELIELADELKQ--EPIDLEELLRELRDSLSPEEREDLLRMLIAIAYAD--G 111 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGCGSCHHHHHHHHHHCHHHH--HCCHHHHHHHHHCTS--HHHHHHHHHHHHHHCTCT--T
T ss_pred cCCCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHh--ccccHHHHHHHHHHhhchHHHHHHHHHHHHHHhcC--C
Confidence 37999999988776655 234456667777776665544 567788887766543210 011124456666554 5
Q ss_pred CcCHHH
Q psy9152 148 YISASD 153 (324)
Q Consensus 148 ~Is~~E 153 (324)
.++..|
T Consensus 112 ~~~~~E 117 (140)
T PF05099_consen 112 EISPEE 117 (140)
T ss_dssp C-SCCH
T ss_pred CCCHHH
Confidence 566555
No 169
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=22.45 E-value=83 Score=22.54 Aligned_cols=33 Identities=18% Similarity=0.480 Sum_probs=18.9
Q ss_pred CCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC
Q psy9152 146 RGYISASDLRAVLQCLGEDLSEEEIEDMIKEVDVD 180 (324)
Q Consensus 146 ~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~D~~ 180 (324)
.|+||.+|+..+|.... ++.+.+..++..+...
T Consensus 19 ~G~lT~~eI~~~L~~~~--~~~e~id~i~~~L~~~ 51 (82)
T PF03979_consen 19 KGYLTYDEINDALPEDD--LDPEQIDEIYDTLEDE 51 (82)
T ss_dssp HSS-BHHHHHHH-S-S-----HHHHHHHHHHHHTT
T ss_pred cCcCCHHHHHHHcCccC--CCHHHHHHHHHHHHHC
Confidence 57788888887776333 6677777777776443
No 170
>PLN02228 Phosphoinositide phospholipase C
Probab=22.11 E-value=3.6e+02 Score=27.14 Aligned_cols=65 Identities=17% Similarity=0.273 Sum_probs=47.1
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhCC--CCCHHHHHHHHHHhccC----CCCCcceeHHHHHHHHHhh
Q psy9152 58 IVEFKEAFRLFDKDGDGSITKEELGRVMRSLGQ--FAREEELQQMLEEVDIN----GKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 58 ~~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~--~~~~~e~~~l~~~~D~d----~d~~g~Is~~EF~~~~~~~ 126 (324)
..++..+|..+-. ++.++.++|..+|..... ..+...+..++..+... .. |.++.+.|..++...
T Consensus 23 ~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 23 PVSIKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHH--GLVHLNAFYRYLFSD 93 (567)
T ss_pred cHHHHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhccc--CccCHHHHHHHhcCc
Confidence 3556777777753 368999999999987642 34567788888887543 23 679999999988653
No 171
>PLN02222 phosphoinositide phospholipase C 2
Probab=22.04 E-value=1.1e+02 Score=30.76 Aligned_cols=64 Identities=9% Similarity=0.157 Sum_probs=37.6
Q ss_pred CcchhhhhccCCCCCCCcCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC-CCCCceeeccCCCCCHHHHHHHHHhc
Q psy9152 132 GGWWFKSKSGHKNYRGYISASDLRAVLQCL-GE-DLSEEEIEDMIKEVDV-DGDGRIDFNGDGYFSFEEFVEIVYNM 205 (324)
Q Consensus 132 ~~~~~~F~~~D~d~~G~Is~~El~~~L~~~-g~-~~~~~~~~~l~~~~D~-~~dG~I~~~~~g~~~~~EF~~~l~~~ 205 (324)
..+..+|..+-. ++.++.++|..+|... +. ..+.+.+..|+..+.. -..+.+++ +.|..+|...
T Consensus 25 ~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~--------~gF~~yL~s~ 91 (581)
T PLN02222 25 REIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHL--------DAFFKYLFGD 91 (581)
T ss_pred HHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCH--------HHHHHHhcCC
Confidence 345556666532 3577777777777643 32 3456666677766521 12344666 7777777653
No 172
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=21.94 E-value=3.5e+02 Score=20.36 Aligned_cols=61 Identities=13% Similarity=0.174 Sum_probs=32.3
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhcc---CCCCCcceeHHHHHHHHHhh
Q psy9152 59 VEFKEAFRLFDKDGDGSITKEELGRVMRSLGQFAREEELQQMLEEVDI---NGKKAGNYSIMNHCGAVVNA 126 (324)
Q Consensus 59 ~~l~~~F~~~D~d~dG~Is~~E~~~~L~~l~~~~~~~e~~~l~~~~D~---d~d~~g~Is~~EF~~~~~~~ 126 (324)
..+..-|..+-. +|.+....|..++ |-.-+.+-..+||..+-. -.. ..|+.+|+..++..+
T Consensus 30 ~~VE~RFd~La~--dG~L~rs~Fg~CI---GM~dSkeFA~eLFdALaRrr~i~~--~~I~k~eL~efW~qi 93 (100)
T PF08414_consen 30 KEVEKRFDKLAK--DGLLPRSDFGECI---GMKDSKEFAGELFDALARRRGIKG--DSITKDELKEFWEQI 93 (100)
T ss_dssp HHHHHHHHHH-B--TTBEEGGGHHHHH---T--S-HHHHHHHHHHHHHHTT--S--SEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHhCc--CCcccHHHHHHhc---CCcccHHHHHHHHHHHHHhcCCcc--CCcCHHHHHHHHHHh
Confidence 556667777766 7899999998877 333344445555544311 012 345555555554443
No 173
>KOG3449|consensus
Probab=21.71 E-value=1.6e+02 Score=22.49 Aligned_cols=42 Identities=21% Similarity=0.301 Sum_probs=35.9
Q ss_pred hhhhccCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 136 FKSKSGHKNYRGYISASDLRAVLQCLGEDLSEEEIEDMIKEV 177 (324)
Q Consensus 136 ~~F~~~D~d~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~ 177 (324)
.+|-.+..-|+-..+..+++.+|...|..+..+-++.+++.+
T Consensus 5 aAYLL~~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel 46 (112)
T KOG3449|consen 5 AAYLLAVLGGNASPSASDIKKILESVGAEIDDERINLVLSEL 46 (112)
T ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHh
Confidence 345555667888899999999999999999999999999988
No 174
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=21.31 E-value=2.4e+02 Score=19.38 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=28.7
Q ss_pred CCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 146 RGYISASDLRAVLQCLGEDLSEEEIEDMIKEV 177 (324)
Q Consensus 146 ~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~ 177 (324)
+-.|+.+-++..+..+|.+.|+..+..+++..
T Consensus 29 NPpine~mir~M~~QMG~kpSekqi~Q~m~~m 60 (64)
T PF03672_consen 29 NPPINEKMIRAMMMQMGRKPSEKQIKQMMRSM 60 (64)
T ss_pred CCCCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 56799999999999999999999999998875
No 175
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=20.66 E-value=1.2e+02 Score=21.22 Aligned_cols=13 Identities=23% Similarity=0.220 Sum_probs=5.1
Q ss_pred CCcCHHHHHHHHH
Q psy9152 147 GYISASDLRAVLQ 159 (324)
Q Consensus 147 G~Is~~El~~~L~ 159 (324)
+.|+.+||.+.|+
T Consensus 40 ~kIsR~~fvr~lR 52 (70)
T PF12174_consen 40 KKISREEFVRKLR 52 (70)
T ss_pred CCCCHHHHHHHHH
Confidence 3344444433333
No 176
>PF06319 DUF1052: Protein of unknown function (DUF1052); InterPro: IPR009394 This entry is represented by Ralstonia phage RSL1, Orf212. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several bacterial proteins of unknown function.; PDB: 3DNX_A.
Probab=20.35 E-value=51 Score=26.93 Aligned_cols=25 Identities=28% Similarity=0.701 Sum_probs=15.5
Q ss_pred HHHhhc--cccccccCCCCcccCCCCCch
Q psy9152 288 FEVFCD--HYNEISAGVSPTILNPDRTSL 314 (324)
Q Consensus 288 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 314 (324)
+-.||| || ++++++|..++ |+.+.|
T Consensus 83 Y~~~CDRfyf-Av~~~~p~e~l-P~~~GL 109 (157)
T PF06319_consen 83 YLDWCDRFYF-AVPPDFPQELL-PDETGL 109 (157)
T ss_dssp GGGG-SEEEE-EE-TTS-GGGS--TTSEE
T ss_pred HHHhhceeEE-ecCCCCChhhC-CCCccE
Confidence 457999 66 88999988876 666654
No 177
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.10 E-value=2.7e+02 Score=19.53 Aligned_cols=33 Identities=18% Similarity=0.374 Sum_probs=29.1
Q ss_pred CCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy9152 145 YRGYISASDLRAVLQCLGEDLSEEEIEDMIKEV 177 (324)
Q Consensus 145 ~~G~Is~~El~~~L~~~g~~~~~~~~~~l~~~~ 177 (324)
.+-.|+.+-++..+..+|.+.|+..+.++++..
T Consensus 35 ~NPpine~~iR~M~~qmGqKpSe~kI~Qvm~~i 67 (71)
T COG3763 35 DNPPINEEMIRMMMAQMGQKPSEKKINQVMRSI 67 (71)
T ss_pred hCCCCCHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 356799999999999999999999999998875
Done!