RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9154
(115 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 97.5 bits (242), Expect = 1e-27
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHT-EVDDVMCILDVLDTAGQE 71
+KL+++GD GVGK+ + +F + F + + TI + T E+D L + DTAGQE
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 66
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQI 109
F + Y R G +LVY +T+++S++NI+++ I
Sbjct: 67 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI 104
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 95.2 bits (236), Expect = 9e-27
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 11 TTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYL-QHTEVDDVMCILDVLDTAG 69
+ K++++GD GVGKS + ++F + F + TI + + +++ L + DTAG
Sbjct: 1 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAG 60
Query: 70 QEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFY 106
QE F + Y R G +LVY +TD++++ NIK ++
Sbjct: 61 QERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWF 97
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 93.8 bits (232), Expect = 6e-26
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHT-EVDDVMCILDVLDTAGQE 71
+KL+++G+ GVGKS + ++F + DY TI + T E+D L + DTAGQE
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
F + Y R G ++VY VTDQ+S+ +K + +I R
Sbjct: 67 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 106
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 88.4 bits (218), Expect = 6e-24
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 10 ITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIE-DSYLQHTEVDDVMCILDVLDTA 68
+TT K++++G+ GVGKS++ ++F F + TI D ++ VD L + DTA
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 64
Query: 69 GQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
GQE F + Y R G +LVY VT + ++ + ++ ++
Sbjct: 65 GQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELET 107
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 87.9 bits (217), Expect = 6e-24
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHT-EVDDVMCILDVLDTAGQE 71
+K+V++G+ GVGK+ + +F Q LF TI ++ T E++ L + DTAGQE
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 65
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFY 106
F ++ + Y R + +L Y +T ++S+ + +
Sbjct: 66 RFRSITQSYYRSANALILTYDITCEESFRCLPEWL 100
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 84.5 bits (208), Expect = 2e-22
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHT-EVDDVMCILDVLDTAGQE 71
+K+V++GD GVGKS + +F + F + TI + + +VD + DTAGQE
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
+ + Y R G LLVY + +YEN++ + ++ D
Sbjct: 65 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS 108
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 80.9 bits (198), Expect = 4e-21
Identities = 83/106 (78%), Positives = 95/106 (89%)
Query: 9 NITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTA 68
N+ TYKLVVVGDGGVGKSA+TIQFFQK+FV DYDPTIEDSYL+HTE+D+ ILDVLDTA
Sbjct: 1 NLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTA 60
Query: 69 GQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
GQEEFSAMREQYMR GDGFL+VYSVTD+ S+E++ F+ ILRVKD
Sbjct: 61 GQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKD 106
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 79.5 bits (195), Expect = 1e-20
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHT-EVDDVMCILDVLDTAGQE 71
+K +++GD GVGKS + QF +K F+ D TI + EV L + DTAGQE
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
F A+ Y R G L+VY +T + +Y ++ + T
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 104
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 79.5 bits (195), Expect = 1e-20
Identities = 25/97 (25%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYL-QHTEVDDVMCILDVLDTAGQE 71
+K++++G+ VGK++ ++ F + T+ + + +D L + DTAGQE
Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
+ + Y R GF+L+Y +T+++S+ ++ + TQ
Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQ 102
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 79.6 bits (195), Expect = 1e-20
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYL-QHTEVDDVMCILDVLDTAGQE 71
+K +V+G+ G GKS + QF +K F D + TI + + V L + DTAGQE
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 65
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
F ++ Y R G LLVY +T +++Y + ++ T + +
Sbjct: 66 RFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQ 109
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 78.8 bits (193), Expect = 2e-20
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDP--TIEDSYLQHTEVDDVMCILDVLDTAGQ 70
+K+++VGD GVGK+ + ++F F+ D + +VD V L + DTAGQ
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 71 EEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
E F ++ Y R LL+Y VT++ S++NI+ + T+I
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQH 111
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 79.3 bits (194), Expect = 2e-20
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 12 TYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQE 71
T K VVVGDG VGK+ + I + F ++Y PT+ D+Y + L + DTAGQE
Sbjct: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQIL 110
++ +R + D FL+ +SV S+EN+K + +
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI 101
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 77.6 bits (190), Expect = 8e-20
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCI----------- 61
KL+ +GD GVGK+ ++ F + T+ + + V +
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 62 LDVLDTAGQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
L + DTAGQE F ++ + R GFLL++ +T QQS+ N++++ +Q+
Sbjct: 66 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA 115
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 77.3 bits (189), Expect = 9e-20
Identities = 50/106 (47%), Positives = 75/106 (70%)
Query: 9 NITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTA 68
++ +K+++VG GGVGKSA+T+QF FV DY+PT DSY + +D +D+LDTA
Sbjct: 1 SLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTA 60
Query: 69 GQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
GQE+++A+R+ Y R G+GFL V+S+T+ +S+ F QILRVK+
Sbjct: 61 GQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE 106
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 76.2 bits (186), Expect = 2e-19
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTI-EDSYLQHTEVDDVMCILDVLDTAGQE 71
+KLV +G+ VGK+++ +F F Y TI D + ++D L + DTAGQE
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
F ++ Y+R ++VY +T+ S++ + + +
Sbjct: 61 RFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGS 104
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 75.8 bits (185), Expect = 3e-19
Identities = 61/105 (58%), Positives = 80/105 (76%)
Query: 10 ITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAG 69
+ YKLVV+G GGVGKSA+T+QF Q +FV YDPTIEDSY + EVD C+L++LDTAG
Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 60
Query: 70 QEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
E+F+AMR+ YM+ G GF LVYS+T Q ++ +++ QILRVKD
Sbjct: 61 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD 105
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 75.1 bits (183), Expect = 6e-19
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 8 NNITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIE-DSYLQHTEVDDVMCILDVLD 66
N I +KLV++G+ VGKS++ ++F + F + TI Q +DD ++ D
Sbjct: 2 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 61
Query: 67 TAGQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
TAGQE + ++ Y R ++VY +T+++S+ K++ +
Sbjct: 62 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKE 103
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 75.0 bits (183), Expect = 7e-19
Identities = 64/105 (60%), Positives = 82/105 (78%)
Query: 10 ITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAG 69
+T YKLVVVG GGVGKSA+TIQ Q FV +YDPTIEDSY + +D C+LD+LDTAG
Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 60
Query: 70 QEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
QEE+SAMR+QYMR G+GFL V+++ + +S+E+I + QI RVKD
Sbjct: 61 QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKD 105
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 74.6 bits (182), Expect = 8e-19
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDP-TIEDSYLQHTEVDDVMCILDVLDTAGQE 71
+K+V++G+G VGK+++ +++ + F + + + L + DTAGQE
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
F A+ Y R +G +LVY +TD+ S++ +K++ +
Sbjct: 64 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKE 100
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 74.7 bits (182), Expect = 1e-18
Identities = 69/103 (66%), Positives = 82/103 (79%)
Query: 12 TYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQE 71
T+KLVVVG GGVGKSA+TIQF Q FV+DYDPTIEDSY + VD + LD+LDTAGQE
Sbjct: 6 THKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQE 65
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
EF AMREQYMR G GFLLV+++ D+QS+ + +TQILRVKD
Sbjct: 66 EFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKD 108
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 73.9 bits (180), Expect = 2e-18
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 10 ITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDD-VMCILDVLDTA 68
+T+ KLV++G+ VGKS+I ++F F + +PTI ++L + ++ DTA
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTA 60
Query: 69 GQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
GQE F+++ Y R L+VY VT QS+ +H+ +
Sbjct: 61 GQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKE 100
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 73.4 bits (179), Expect = 3e-18
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHT-EVDDVMCILDVLDTAGQE 71
+K +++GD GVGKS + +QF K F +D TI + +D L + DTAGQE
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 63
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
F ++ Y R G LLVY +T ++++ ++ + +
Sbjct: 64 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSS 107
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 73.4 bits (179), Expect = 3e-18
Identities = 55/105 (52%), Positives = 78/105 (74%)
Query: 10 ITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAG 69
+ YK+VV+G GGVGKSA+T+QF F+ YDPTIED Y + EVD +L++LDTAG
Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60
Query: 70 QEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
E+F++MR+ Y++ G GF+LVYS+ +QQS+++IK QI+RVK
Sbjct: 61 TEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKR 105
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 73.1 bits (178), Expect = 5e-18
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTE-VDDVMCILDVLDTAGQE 71
+K++++GDGGVGKS++ ++ F T TI +L VD + + DTAGQE
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
F ++R + R D LL +SV D QS++N+ ++ + + D
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADV 110
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 72.4 bits (176), Expect = 6e-18
Identities = 70/99 (70%), Positives = 79/99 (79%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
Y+LVVVG GGVGKSA+TIQF Q FVTDYDPTIEDSY + +DD LD+LDTAGQEE
Sbjct: 6 YRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEE 65
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
F AMREQYMR G+GFLLV+SVTD+ S+E I F QILR
Sbjct: 66 FGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILR 104
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 69.7 bits (169), Expect = 8e-17
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
KLV+VGDG GK+ + I + F Y PT+ ++Y+ EVD L + DTAG E+
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLED 62
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
+ +R D L+ +S+ S ENI +T ++
Sbjct: 63 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK 101
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 69.7 bits (169), Expect = 1e-16
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 12 TYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQE 71
K VVVGDG VGK+ + I + F +Y PT+ D+Y + VD L + DTAGQE
Sbjct: 5 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQE 64
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQIL 110
++ +R + D L+ +S+ S+EN++ + +
Sbjct: 65 DYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEV 103
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 69.6 bits (169), Expect = 1e-16
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 1 MAKAPNNNNITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMC 60
MA P K VVVGDG VGK+ + + + F +Y PT+ D Y V
Sbjct: 1 MAHGPGA---LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQY 57
Query: 61 ILDVLDTAGQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
+L + DTAGQE++ +R D FL+ +SV + S++N+K + L+
Sbjct: 58 LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK 108
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 67.0 bits (162), Expect = 7e-16
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTI-EDSYLQHTEVDDVMCILDVLDTAGQE 71
K+ ++GD GVGKS+I +F + F + +PTI + + + + + DTAG E
Sbjct: 5 LKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLE 64
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
F A+ Y R ++VY +T ++++ +K++ +
Sbjct: 65 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRE 101
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 67.4 bits (163), Expect = 8e-16
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 14 KLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEF 73
K+VVVGD GK+A+ F + F +Y PT+ ++Y E+D L + DT+G +
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 63
Query: 74 SAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQI 109
+R D L+ + ++ ++ +++ +
Sbjct: 64 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE 99
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 67.0 bits (162), Expect = 1e-15
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTE--VDDVMCILDVLDTAGQ 70
K++++GD GVGK+++ ++ + Y TI +L D + + V DTAGQ
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 71 EEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
E F ++ + R D +LVY VT+ S+ENIK + +
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDE 100
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 62.4 bits (150), Expect = 5e-14
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIED-SYLQHTEVDDVMCILDVLDTAGQE 71
K++++GD GVGK+++ Q+ K F Y TI + VDD + + + DTAGQE
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
F ++ + R D +LV+ VT +++ + + + L
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASP 106
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 61.6 bits (148), Expect = 9e-14
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYL-QHTEVDDVMCILDVLDTAGQE 71
+K++V+GD VGK+ +T +F F + TI + + ++D + + DTAGQE
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 62
Query: 72 EF-SAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
F +M + Y R + VY +T+ S+ ++ + + +
Sbjct: 63 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLL 106
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 61.3 bits (147), Expect = 1e-13
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 14 KLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYL-QHTEVDDVMCILDVLDTAGQEE 72
K+VVVG+G VGKS++ ++ + +F DY TI +L + +V+D L + DTAGQEE
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
F A+ + Y R +LV+S TD++S+E I + +
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREK 99
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 60.4 bits (145), Expect = 3e-13
Identities = 43/102 (42%), Positives = 62/102 (60%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
Y++ V G GGVGKS++ ++F + F Y PT+ED+Y Q D +C L + DT G +
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 62
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
F AM+ + KG F+LVYS+T +QS E +K Y QI +K
Sbjct: 63 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKG 104
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 60.0 bits (144), Expect = 4e-13
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
KL + G GVGKSA+ ++F K F+ +YDPT+E +Y +DD + +++ +E
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI-LDTAGQE 61
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
+ RE +MR G+GF+LVY +TD+ S+E +
Sbjct: 62 DTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNI 97
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 56.3 bits (134), Expect = 9e-12
Identities = 40/99 (40%), Positives = 65/99 (65%)
Query: 12 TYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQE 71
+ K+ ++G VGKS++TIQF + FV YDPTIE+++ + V+ L ++DTAGQ+
Sbjct: 4 SRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQD 63
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQIL 110
E+S + Y +G++LVYSVT +S+E IK + ++L
Sbjct: 64 EYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLL 102
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 52.7 bits (125), Expect = 2e-10
Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 14 KLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEF 73
++++VG GK+ I + VT TI V+ V D GQ++
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVT----TIPTIGFNVETVEYKNISFTVWDVGGQDKI 57
Query: 74 SAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
+ Y + G + V D++ + ++L
Sbjct: 58 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLA 95
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 52.3 bits (124), Expect = 4e-10
Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
+++++G GK+ I + VT TI V +V D GQ++
Sbjct: 13 MRILMLGLDAAGKTTILYKLKLGQSVT----TIPTVGFNVETVTYKNVKFNVWDVGGQDK 68
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
+ Y G + V D+ + + +I+ ++
Sbjct: 69 IRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDRE 110
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 51.6 bits (122), Expect = 6e-10
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTI-EDSYLQHTEVDDVMCILDVLDTAGQE 71
+KLV+VGDGG GK+ + F Y T+ + + + +V DTAGQE
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 63
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
+F +R+ Y + ++++ VT + +Y+N+ +++ ++RV +
Sbjct: 64 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEN 107
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 51.9 bits (123), Expect = 7e-10
Identities = 13/98 (13%), Positives = 23/98 (23%), Gaps = 8/98 (8%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
KL+++G G GKS I Q + D GQ
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTGIVET--------HFTFKDLHFKMFDVGGQRS 54
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQIL 110
+ +++D ++
Sbjct: 55 ERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMH 92
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 51.1 bits (121), Expect = 9e-10
Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 9 NITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTA 68
+I +L V+GD GKS++ +F + + T + Y + VD ++ +
Sbjct: 2 SIPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLI---- 56
Query: 69 GQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRV 112
+EE A ++ D + V+S+ D+ S++ + + Q+ +
Sbjct: 57 -REEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSL 99
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 49.5 bits (117), Expect = 5e-09
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 6/92 (6%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
K++++G G GKS Q + DPT + + + ++D GQ
Sbjct: 3 VKILLLGAGESGKSTFLKQM---RIIHGQDPTKG---IHEYDFEIKNVPFKMVDVGGQRS 56
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKH 104
+ L + S ++
Sbjct: 57 ERKRWFECFDSVTSILFLVSSSEFDQVLMEDR 88
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 48.5 bits (114), Expect = 8e-09
Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
+L+++G GK+ I ++ F V PT+ + + L++ D GQ+
Sbjct: 3 LRLLMLGLDNAGKTTI-LKKFNGEDVDTISPTLGFNIKTL---EHRGFKLNIWDVGGQKS 58
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
+ Y DG + V D+Q ++ +
Sbjct: 59 LRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQS 94
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 45.1 bits (105), Expect = 1e-07
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
YK++++G GVGKSA+ + F + +Y + VD L V D Q+
Sbjct: 2 YKVLLLGAPGVGKSAL-ARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDG 60
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILR 111
+ M GD +++VYSVTD+ S+E Q+ R
Sbjct: 61 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRR 99
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 44.7 bits (104), Expect = 2e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 11 TTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQH 52
T Y++V++G+ GVGKS + F D D +
Sbjct: 2 TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYE 43
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 44.9 bits (105), Expect = 2e-07
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 5/92 (5%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
KL+++G G GKS Q ++ PT + D I ++D GQ
Sbjct: 3 LKLLLLGTGESGKSTFIKQM--RIIHGSGVPTT---GIIEYPFDLQSVIFRMVDVGGQRS 57
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKH 104
+ + ++++
Sbjct: 58 ERRKWIHCFENVTSIMFLVALSEYDQVLVESD 89
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 44.2 bits (103), Expect = 3e-07
Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
+K+++VG GK+ I QF V + E+ + D GQE
Sbjct: 16 HKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE----EIVINNTRFLMWDIGGQES 71
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQIL 110
+ Y + ++V TD++ + ++L
Sbjct: 72 LRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKML 109
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 43.9 bits (102), Expect = 4e-07
Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 4/95 (4%)
Query: 14 KLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEF 73
KL+ +G GK+ + T PT + + + D G +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTWHPTSEELAIGN---IKFTTFDLGGHIQA 57
Query: 74 SAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
+ + Y + +G + + D + ++ +
Sbjct: 58 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDA 92
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 44.0 bits (103), Expect = 5e-07
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 12 TYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQE 71
T++L+++G G GKS I Q V T + T+ + D GQ
Sbjct: 6 THRLLLLGAGESGKSTIVKQMRILHVV----LTS---GIFETKFQVDKVNFHMFDVGGQR 58
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKH 104
+ Q + V + + +
Sbjct: 59 DERRKWIQCFNDVTAIIFVVASSSYNMVIREDN 91
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 43.8 bits (102), Expect = 5e-07
Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
+++++G G GK+ I + VT + + L+V D GQ
Sbjct: 18 LRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVE----TLSYKNLKLNVWDLGGQTS 73
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
Y + V TD+ +L+ ++
Sbjct: 74 IRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEE 115
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 42.6 bits (99), Expect = 1e-06
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
+++++G GK+ + Q + + ++ L+V D GQ +
Sbjct: 17 VRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQ----GFKLNVWDIGGQRK 72
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKD 114
Y D + V D++ +E T++L +
Sbjct: 73 IRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEK 114
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 41.6 bits (96), Expect = 3e-06
Identities = 15/96 (15%), Positives = 26/96 (27%), Gaps = 4/96 (4%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
+++++G G GK+ I + VT + + V D G
Sbjct: 6 MRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYK----NLKFQVWDLGGLTS 61
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
Y D + V D+ K
Sbjct: 62 IRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVA 97
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 40.1 bits (92), Expect = 1e-05
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILD 63
+L +VG GK+ F D PT+ + + T+ + + + D
Sbjct: 3 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWD 53
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 39.7 bits (91), Expect = 2e-05
Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 4/96 (4%)
Query: 13 YKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEE 72
KLV +G GK+ + S E+ D G +
Sbjct: 14 GKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSE----ELTIAGMTFTTFDLGGHIQ 69
Query: 73 FSAMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQ 108
+ + Y+ +G + + D + K
Sbjct: 70 ARRVWKNYLPAINGIVFLVDCADHERLLESKEELDS 105
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 37.7 bits (86), Expect = 8e-05
Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 14 KLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEF 73
++ VG GK+ + ++ + +I DS + ++ L ++D G E
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
Query: 74 S-AMREQYMRKGDGFLLVYSVTDQQSY-ENIKHFYTQILRVKD 114
+ +++ + V Q +++ F Q+L
Sbjct: 61 RFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSM 103
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 31.3 bits (70), Expect = 0.021
Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 12/117 (10%)
Query: 11 TTYKLVVVGDGGVGKSAI------TIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDV 64
+ + V G+ G GKS+ + T + + + D+
Sbjct: 55 SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDL 114
Query: 65 --LDTAGQEEFSAMREQYMRKGDGFLLV----YSVTDQQSYENIKHFYTQILRVKDK 115
+ + + + + + D F+++ + D + I + V+ K
Sbjct: 115 PGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFVRTK 171
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 30.4 bits (67), Expect = 0.034
Identities = 10/101 (9%), Positives = 26/101 (25%)
Query: 15 LVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEFS 74
+++ G GK+++ S + + +
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLVDFPGHVKLRYKLSD 65
Query: 75 AMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
++ + +V S D + F IL + +
Sbjct: 66 YLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITES 106
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 30.3 bits (68), Expect = 0.036
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 52 HTEVDDVMCILDVLDTAGQEEFSAMREQYMRKGDGFLLVYSVTD---QQSYENIKH 104
H E + +D G ++ + DG +LV S D Q+ E+I
Sbjct: 59 HVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILL 114
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 27.9 bits (61), Expect = 0.27
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 7/37 (18%)
Query: 14 KLVVVGDGGVGKSAITI-------QFFQKLFVTDYDP 43
+ + G GG+GKS T + +K+ + DP
Sbjct: 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 27.9 bits (61), Expect = 0.29
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 13/118 (11%)
Query: 9 NITTYKLVVVGDGGVGKSAI--TIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLD 66
++ + ++V+G GGVGKS+ +I + + ++ + + ++D
Sbjct: 29 DVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLN--IID 86
Query: 67 TAGQEEFSAMREQYMRK---------GDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
T G E + + + D L V + + K I K
Sbjct: 87 TPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGK 144
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 27.6 bits (60), Expect = 0.30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 14 KLVVVGDGGVGKSAITI 30
++ + G GG+GKS T
Sbjct: 3 QVAIYGKGGIGKSTTTQ 19
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 27.7 bits (60), Expect = 0.32
Identities = 10/100 (10%), Positives = 28/100 (28%)
Query: 16 VVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEFSA 75
+V GG GKS + +Q ++ + + + +
Sbjct: 33 ALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAH 92
Query: 76 MREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQILRVKDK 115
+ + + LL+ + ++ + R +
Sbjct: 93 LSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEG 132
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 27.6 bits (60), Expect = 0.37
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 8 NNITTYKLVVVGDGGVGKSAITI 30
NI Y L G GGVGK++I+
Sbjct: 5 QNIPPY-LFFTGKGGVGKTSISC 26
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 27.3 bits (59), Expect = 0.49
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 7/36 (19%)
Query: 15 LVVVGDGGVGKSAITI-------QFFQKLFVTDYDP 43
++++G GGVGK+ + + +T DP
Sbjct: 23 IMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP 58
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 26.9 bits (59), Expect = 0.51
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 VVVGDGGVGKSAI 28
V++G+ GVGK+AI
Sbjct: 47 VLIGEPGVGKTAI 59
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 26.2 bits (56), Expect = 1.0
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 14 KLVVVGDGGVGKSAITIQFFQK--LFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQE 71
K+ +VG VGKS + K V+ T D +D + +DTAG
Sbjct: 10 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYV--FVDTAGLR 67
Query: 72 EFSAMREQYM 81
S + + +
Sbjct: 68 RKSRVEPRTV 77
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 268
Score = 26.1 bits (57), Expect = 1.2
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 16 VVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVM 59
++VG+ GVGK+AI ++ D + D + ++ ++
Sbjct: 43 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 86
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 25.9 bits (56), Expect = 1.3
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 15 LVVVGDGGVGKSAITIQFFQK 35
L + G G GKS I Q K
Sbjct: 47 LFLHGRAGSGKSVIASQALSK 67
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 25.5 bits (54), Expect = 1.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 14 KLVVVGDGGVGKSAI 28
K+V+ G GKS++
Sbjct: 3 KVVIAGRPNAGKSSL 17
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 25.1 bits (53), Expect = 2.2
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1 MAKAPNNNNITTYKLVVVGDGGVGKSAITIQFF-QKLFVTDYDPTIEDSYLQHTEVDDVM 59
+ P++ I ++ G GKS+ QK + EV D
Sbjct: 8 IRHLPSDTGI---EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK 64
Query: 60 CILDVLDTAGQEEFSAMREQYM 81
++D+ E M+ ++
Sbjct: 65 RLVDLPGYGYAEVPEEMKRKWQ 86
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 24.7 bits (52), Expect = 2.9
Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 16 VVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEFSA 75
G G GK+ I Q L ++ E++ + +D + F
Sbjct: 38 EFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYID-----TEGTFRP 92
Query: 76 MREQYMRKGDGF 87
R M + G
Sbjct: 93 ERIMQMAEHAGI 104
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 24.6 bits (52), Expect = 3.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1 MAKAPNNNNITTYKLVVVGDGGVGKSA 27
+ KA T +++VVG G G +A
Sbjct: 8 IQKAIAAGPSETTQVLVVGAGSAGFNA 34
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 24.7 bits (52), Expect = 3.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 15 LVVVGDGGVGKSAITIQFFQKL 36
+V+G GKS+I +L
Sbjct: 32 TLVLGLRRTGKSSIIKIGINEL 53
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 24.3 bits (51), Expect = 4.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 16 VVVGDGGVGKSAITIQF 32
+V G GG GK+ +T
Sbjct: 7 IVSGKGGTGKTTVTANL 23
>d2q37a1 a.288.1.1 (A:6-160) OHCU decarboxylase, UraD {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 155
Score = 24.1 bits (52), Expect = 4.0
Identities = 6/44 (13%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 62 LDVLDTAGQEEFSAMREQYMRKGDGFLLVYSVTDQQSYENIKHF 105
+ +E + Y +K GF+ + + + E +
Sbjct: 80 FATTSASALQELAEWNVLYKKK-FGFIFIICASGRTHAEMLHAL 122
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 24.1 bits (51), Expect = 4.7
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 17 VVGDGGVGKSAITIQFFQKLFVTDYDPTI 45
+ G GVGKS L + +
Sbjct: 56 ITGVPGVGKSTTIDALGSLLTAAGHKVAV 84
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE
{Escherichia coli [TaxId: 562]}
Length = 170
Score = 24.1 bits (51), Expect = 4.8
Identities = 6/42 (14%), Positives = 16/42 (38%)
Query: 6 NNNNITTYKLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIED 47
+ +++++G GG + + VT + T+
Sbjct: 12 LSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSR 53
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 23.9 bits (51), Expect = 5.7
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 5/93 (5%)
Query: 16 VVVGDGGVGKSAITIQFFQKLFVTDYDPT----IEDSYLQHTEVDDVMCILDVLDTAGQE 71
V G GVGKS++ +L + + + +H E+ L V DT G
Sbjct: 101 VFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGGL-VADTPGFS 159
Query: 72 EFSAMREQYMRKGDGFLLVYSVTDQQSYENIKH 104
+ G F + + + H
Sbjct: 160 SLEFTDIEEEELGYTFPDIREKSSSCKFRGCLH 192
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 24.0 bits (50), Expect = 5.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 16 VVVGDGGVGKSAITIQF 32
V G GG GK+ IT
Sbjct: 6 VASGKGGTGKTTITANL 22
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 23.5 bits (50), Expect = 5.9
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 6/23 (26%)
Query: 4 APNNNNITTYKLVVVGDGGVGKS 26
AP K+V+VG G +G
Sbjct: 1 APKA------KIVLVGSGMIGGV 17
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia
coli [TaxId: 562]}
Length = 385
Score = 23.8 bits (50), Expect = 5.9
Identities = 11/64 (17%), Positives = 24/64 (37%)
Query: 14 KLVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEF 73
K ++V D + + + + K+ I D + + + V L V +G +
Sbjct: 32 KALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYL 91
Query: 74 SAMR 77
A+
Sbjct: 92 IAIG 95
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 23.6 bits (49), Expect = 7.1
Identities = 9/96 (9%), Positives = 25/96 (26%)
Query: 15 LVVVGDGGVGKSAITIQFFQKLFVTDYDPTIEDSYLQHTEVDDVMCILDVLDTAGQEEFS 74
+G G+GK+ + +++ + + + Q +
Sbjct: 49 YGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYP 108
Query: 75 AMREQYMRKGDGFLLVYSVTDQQSYENIKHFYTQIL 110
LV ++ + Y + Q +
Sbjct: 109 IQVRGAPALDILKALVDNLYVENHYLLVILDEFQSM 144
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 23.8 bits (50), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 16 VVVGDGGVGKSAITIQF 32
+V G G GK+ +IQF
Sbjct: 30 LVSGTSGTGKTLFSIQF 46
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 23.6 bits (50), Expect = 8.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 7 NNNITTYKLVVVGDGGVGKSAI 28
++ + ++VVVG GKS++
Sbjct: 19 SDPLDLPQIVVVGSQSSGKSSV 40
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId:
161736]}
Length = 321
Score = 23.5 bits (50), Expect = 9.2
Identities = 5/28 (17%), Positives = 11/28 (39%), Gaps = 6/28 (21%)
Query: 1 MAKAPNNNNITTYKLVVVGDGGVGKSAI 28
+ + ++V G G GK+ +
Sbjct: 118 GHRYASGM------VIVTGKGNSGKTPL 139
>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter
jejuni [TaxId: 197]}
Length = 193
Score = 23.4 bits (49), Expect = 9.5
Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 14 KLVVVGDGGVGKSAITI----QFFQKLFVTDYDPTIEDSYLQHTEV 55
K+ + G G G + + + +F+ D+ +S L +
Sbjct: 4 KIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDF 49
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide
transhydrogenase dI component {Rhodospirillum rubrum
[TaxId: 1085]}
Length = 183
Score = 23.0 bits (49), Expect = 9.8
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 14 KLVVVGDGGVGKSAITI 30
+++V G G G AI
Sbjct: 31 RVLVFGVGVAGLQAIAT 47
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.386
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 420,568
Number of extensions: 17572
Number of successful extensions: 227
Number of sequences better than 10.0: 1
Number of HSP's gapped: 210
Number of HSP's successfully gapped: 109
Length of query: 115
Length of database: 2,407,596
Length adjustment: 73
Effective length of query: 42
Effective length of database: 1,405,306
Effective search space: 59022852
Effective search space used: 59022852
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.5 bits)