Query psy9159
Match_columns 259
No_of_seqs 146 out of 1735
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 20:25:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtx_A MAMA; tetratricopeptide 99.9 1.5E-25 5.2E-30 177.0 19.0 166 33-246 10-175 (184)
2 2pl2_A Hypothetical conserved 99.9 2.3E-25 7.9E-30 181.8 20.1 168 31-247 8-186 (217)
3 4i17_A Hypothetical protein; T 99.9 1.2E-23 4.2E-28 171.7 16.9 177 29-253 8-221 (228)
4 2h6f_A Protein farnesyltransfe 99.9 8.4E-24 2.9E-28 187.2 14.9 166 34-247 103-275 (382)
5 3urz_A Uncharacterized protein 99.9 1.8E-23 6E-28 169.5 14.6 170 30-246 6-191 (208)
6 4gyw_A UDP-N-acetylglucosamine 99.9 1.9E-23 6.5E-28 198.4 17.1 166 33-246 14-179 (723)
7 2pl2_A Hypothetical conserved 99.9 2.5E-22 8.7E-27 163.7 18.3 171 32-240 43-213 (217)
8 4eqf_A PEX5-related protein; a 99.9 4.9E-21 1.7E-25 166.4 22.1 201 29-247 66-316 (365)
9 3qky_A Outer membrane assembly 99.9 1.7E-21 5.9E-26 162.4 18.1 177 29-252 16-235 (261)
10 1w3b_A UDP-N-acetylglucosamine 99.9 1E-20 3.5E-25 165.9 22.8 188 45-247 149-374 (388)
11 1w3b_A UDP-N-acetylglucosamine 99.9 8.1E-21 2.8E-25 166.5 22.0 177 45-246 47-237 (388)
12 3as5_A MAMA; tetratricopeptide 99.9 5.9E-21 2E-25 148.8 18.8 170 32-249 12-181 (186)
13 4gyw_A UDP-N-acetylglucosamine 99.9 8.6E-22 2.9E-26 187.1 16.8 143 60-247 4-146 (723)
14 2h6f_A Protein farnesyltransfe 99.9 1.5E-21 5E-26 172.8 16.8 168 32-247 135-310 (382)
15 3hym_B Cell division cycle pro 99.9 2.8E-20 9.5E-25 158.2 22.6 203 34-250 62-308 (330)
16 1fch_A Peroxisomal targeting s 99.9 4.1E-20 1.4E-24 160.0 23.7 198 30-245 66-318 (368)
17 4ga2_A E3 SUMO-protein ligase 99.9 8.7E-22 3E-26 151.6 11.6 140 43-227 9-149 (150)
18 2q7f_A YRRB protein; TPR, prot 99.9 2.1E-20 7.2E-25 152.5 19.4 192 32-251 27-232 (243)
19 4abn_A Tetratricopeptide repea 99.9 8.4E-21 2.9E-25 172.4 18.6 185 32-247 106-293 (474)
20 3vtx_A MAMA; tetratricopeptide 99.9 2.8E-20 9.4E-25 146.6 18.1 141 62-247 2-142 (184)
21 3hym_B Cell division cycle pro 99.9 4.6E-20 1.6E-24 156.8 20.6 191 29-247 23-228 (330)
22 2vq2_A PILW, putative fimbrial 99.9 5.1E-20 1.8E-24 148.1 19.6 167 32-246 12-182 (225)
23 2yhc_A BAMD, UPF0169 lipoprote 99.9 7E-20 2.4E-24 149.8 20.6 200 31-251 7-223 (225)
24 4eqf_A PEX5-related protein; a 99.9 2.6E-20 9.1E-25 161.8 19.1 200 32-245 103-353 (365)
25 2pzi_A Probable serine/threoni 99.9 3.8E-21 1.3E-25 182.0 14.8 159 42-247 403-569 (681)
26 3ieg_A DNAJ homolog subfamily 99.9 1.6E-19 5.4E-24 154.9 23.6 189 35-251 127-345 (359)
27 3uq3_A Heat shock protein STI1 99.9 3.1E-20 1E-24 152.5 18.0 193 31-242 8-237 (258)
28 2r5s_A Uncharacterized protein 99.9 9E-21 3.1E-25 149.2 14.2 164 28-240 6-172 (176)
29 2q7f_A YRRB protein; TPR, prot 99.9 1.9E-20 6.3E-25 152.8 16.5 159 64-247 22-194 (243)
30 3u4t_A TPR repeat-containing p 99.9 1.8E-20 6.1E-25 155.9 16.4 186 29-246 4-213 (272)
31 3cv0_A Peroxisome targeting si 99.9 3.3E-19 1.1E-23 151.3 24.4 200 28-245 21-273 (327)
32 3ieg_A DNAJ homolog subfamily 99.9 1.1E-19 3.6E-24 155.9 21.2 190 31-248 6-224 (359)
33 2ho1_A Type 4 fimbrial biogene 99.8 1.6E-19 5.5E-24 148.6 20.5 192 32-251 41-248 (252)
34 4ga2_A E3 SUMO-protein ligase 99.8 1.3E-21 4.4E-26 150.7 6.8 126 94-250 12-138 (150)
35 4gco_A Protein STI-1; structur 99.8 3.2E-20 1.1E-24 138.8 13.4 122 56-222 4-125 (126)
36 3gyz_A Chaperone protein IPGC; 99.8 3.4E-21 1.2E-25 148.9 7.7 126 90-246 13-138 (151)
37 2vsy_A XCC0866; transferase, g 99.8 1.2E-19 4.2E-24 167.7 18.3 158 45-247 3-163 (568)
38 2y4t_A DNAJ homolog subfamily 99.8 5.5E-19 1.9E-23 157.2 21.9 190 35-252 150-369 (450)
39 3u4t_A TPR repeat-containing p 99.8 4E-20 1.4E-24 153.7 13.6 194 32-255 41-264 (272)
40 3fp2_A TPR repeat-containing p 99.8 1.7E-19 5.9E-24 163.7 18.6 183 42-250 288-500 (537)
41 4i17_A Hypothetical protein; T 99.8 2E-19 6.7E-24 146.6 16.9 139 61-244 3-149 (228)
42 4gco_A Protein STI-1; structur 99.8 3.1E-20 1.1E-24 138.8 10.9 117 104-251 4-120 (126)
43 2y4t_A DNAJ homolog subfamily 99.8 3.6E-19 1.2E-23 158.3 19.1 192 29-248 27-247 (450)
44 2ond_A Cleavage stimulation fa 99.8 1.9E-18 6.5E-23 147.8 22.8 181 48-246 33-237 (308)
45 3fp2_A TPR repeat-containing p 99.8 7.9E-19 2.7E-23 159.4 21.4 200 29-246 26-344 (537)
46 2xpi_A Anaphase-promoting comp 99.8 1.4E-18 4.9E-23 160.0 23.0 184 45-253 387-591 (597)
47 1xnf_A Lipoprotein NLPI; TPR, 99.8 2.6E-18 8.8E-23 142.6 21.9 188 31-247 46-250 (275)
48 3qou_A Protein YBBN; thioredox 99.8 3.9E-19 1.3E-23 151.0 16.3 164 29-240 118-283 (287)
49 2vq2_A PILW, putative fimbrial 99.8 3.1E-18 1.1E-22 137.6 19.4 172 34-252 48-222 (225)
50 4abn_A Tetratricopeptide repea 99.8 3.6E-19 1.2E-23 161.6 15.1 172 45-253 82-262 (474)
51 4g1t_A Interferon-induced prot 99.8 9.4E-19 3.2E-23 156.9 16.7 193 45-251 227-469 (472)
52 3mkr_A Coatomer subunit epsilo 99.8 4.1E-18 1.4E-22 145.1 19.6 177 42-250 77-273 (291)
53 3gyz_A Chaperone protein IPGC; 99.8 6.7E-19 2.3E-23 136.0 13.2 115 52-211 23-137 (151)
54 3mkr_A Coatomer subunit epsilo 99.8 3.4E-18 1.2E-22 145.7 18.9 161 32-235 105-288 (291)
55 1xnf_A Lipoprotein NLPI; TPR, 99.8 2.4E-18 8.1E-23 142.8 17.0 159 42-247 17-179 (275)
56 2pzi_A Probable serine/threoni 99.8 4.5E-19 1.6E-23 167.8 14.2 169 31-248 436-609 (681)
57 4g1t_A Interferon-induced prot 99.8 1.3E-18 4.3E-23 156.0 15.6 188 42-246 150-368 (472)
58 1fch_A Peroxisomal targeting s 99.8 1.8E-18 6E-23 149.7 15.9 154 42-241 193-359 (368)
59 2vgx_A Chaperone SYCD; alterna 99.8 5.4E-19 1.9E-23 135.7 11.2 123 99-252 7-129 (148)
60 3cv0_A Peroxisome targeting si 99.8 1E-18 3.5E-23 148.3 13.5 158 42-245 150-319 (327)
61 2xpi_A Anaphase-promoting comp 99.8 2.4E-17 8.2E-22 151.8 23.0 179 45-247 353-551 (597)
62 2gw1_A Mitochondrial precursor 99.8 1.5E-18 5.3E-23 156.3 14.7 176 45-248 284-485 (514)
63 1qqe_A Vesicular transport pro 99.8 1.9E-18 6.4E-23 146.9 13.6 172 31-249 39-236 (292)
64 3qky_A Outer membrane assembly 99.8 6.9E-18 2.4E-22 140.4 16.5 159 58-253 8-189 (261)
65 2xcb_A PCRH, regulatory protei 99.8 8.2E-19 2.8E-23 133.2 8.7 122 100-252 5-126 (142)
66 2vgx_A Chaperone SYCD; alterna 99.8 2.2E-18 7.5E-23 132.3 10.3 119 52-215 8-126 (148)
67 2ond_A Cleavage stimulation fa 99.8 3.7E-17 1.3E-21 139.8 18.6 169 47-249 80-278 (308)
68 2gw1_A Mitochondrial precursor 99.8 9.3E-18 3.2E-22 151.1 15.5 166 33-247 242-407 (514)
69 1p5q_A FKBP52, FK506-binding p 99.8 1.1E-18 3.8E-23 151.6 8.9 152 45-241 127-294 (336)
70 3urz_A Uncharacterized protein 99.8 1E-17 3.5E-22 135.4 13.7 135 63-242 2-154 (208)
71 2fo7_A Synthetic consensus TPR 99.8 9E-17 3.1E-21 118.1 17.1 135 66-245 2-136 (136)
72 2xcb_A PCRH, regulatory protei 99.8 9.3E-18 3.2E-22 127.3 11.8 131 52-227 5-135 (142)
73 2ho1_A Type 4 fimbrial biogene 99.7 1E-16 3.4E-21 131.7 18.2 164 59-247 30-210 (252)
74 2e2e_A Formate-dependent nitri 99.7 3.9E-17 1.3E-21 127.9 12.4 131 92-253 23-156 (177)
75 1dce_A Protein (RAB geranylger 99.7 2.4E-16 8.3E-21 146.0 18.5 168 45-247 43-227 (567)
76 2e2e_A Formate-dependent nitri 99.7 4E-17 1.4E-21 127.8 11.3 136 30-213 12-150 (177)
77 3as5_A MAMA; tetratricopeptide 99.7 1.7E-16 5.8E-21 123.2 14.2 139 64-247 7-145 (186)
78 3uq3_A Heat shock protein STI1 99.7 1.8E-16 6.2E-21 129.8 14.7 159 63-247 3-208 (258)
79 3qou_A Protein YBBN; thioredox 99.7 2.4E-16 8.1E-21 133.8 15.5 154 46-247 101-254 (287)
80 3upv_A Heat shock protein STI1 99.7 3E-16 1E-20 116.0 14.0 118 62-224 1-124 (126)
81 2r5s_A Uncharacterized protein 99.7 3.7E-17 1.3E-21 128.4 9.4 142 61-247 2-143 (176)
82 3edt_B KLC 2, kinesin light ch 99.7 1.5E-16 5E-21 131.8 13.5 163 32-242 47-282 (283)
83 1hh8_A P67PHOX, NCF-2, neutrop 99.7 5.7E-16 2E-20 124.2 16.3 135 65-247 6-156 (213)
84 1a17_A Serine/threonine protei 99.7 7E-16 2.4E-20 118.3 16.1 134 64-242 12-147 (166)
85 3dss_A Geranylgeranyl transfer 99.7 1.9E-15 6.6E-20 130.5 20.6 170 45-247 43-228 (331)
86 1zu2_A Mitochondrial import re 99.7 4.5E-16 1.5E-20 120.0 14.6 113 89-212 12-125 (158)
87 1ouv_A Conserved hypothetical 99.7 2.9E-15 9.9E-20 125.0 20.5 176 32-243 10-217 (273)
88 2yhc_A BAMD, UPF0169 lipoprote 99.7 6.2E-16 2.1E-20 126.2 15.9 162 64-252 3-187 (225)
89 3dra_A Protein farnesyltransfe 99.7 6.3E-16 2.2E-20 132.5 16.4 160 45-246 47-220 (306)
90 2vyi_A SGTA protein; chaperone 99.7 5.3E-16 1.8E-20 113.6 12.9 125 59-228 6-130 (131)
91 3nf1_A KLC 1, kinesin light ch 99.7 1.8E-16 6E-21 133.5 11.3 164 33-244 74-310 (311)
92 2lni_A Stress-induced-phosphop 99.7 1.1E-15 3.8E-20 112.7 14.2 123 60-227 11-133 (133)
93 3edt_B KLC 2, kinesin light ch 99.7 1.3E-16 4.4E-21 132.1 10.1 154 45-243 15-200 (283)
94 2fbn_A 70 kDa peptidylprolyl i 99.7 8.3E-17 2.8E-21 128.6 8.6 153 45-242 18-187 (198)
95 2ooe_A Cleavage stimulation fa 99.7 3.8E-15 1.3E-19 136.4 20.7 161 45-249 293-462 (530)
96 3ulq_A Response regulator aspa 99.7 2.7E-16 9.4E-21 137.8 12.5 163 34-244 109-296 (383)
97 1hh8_A P67PHOX, NCF-2, neutrop 99.7 2.6E-15 8.8E-20 120.4 17.1 150 32-244 10-175 (213)
98 3sz7_A HSC70 cochaperone (SGT) 99.7 8.3E-16 2.8E-20 119.0 13.6 119 60-223 6-124 (164)
99 3upv_A Heat shock protein STI1 99.7 3.5E-16 1.2E-20 115.6 10.4 102 110-242 1-102 (126)
100 2ifu_A Gamma-SNAP; membrane fu 99.7 7E-16 2.4E-20 131.9 13.3 170 32-249 39-231 (307)
101 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 5.9E-17 2E-21 146.4 6.9 149 45-238 248-412 (457)
102 3u64_A Protein TP_0956; tetrat 99.7 1.9E-15 6.7E-20 126.6 15.3 182 49-245 50-273 (301)
103 3q7a_A Farnesyltransferase alp 99.7 3E-15 1E-19 130.0 16.7 167 45-247 68-243 (349)
104 1ouv_A Conserved hypothetical 99.7 1.6E-14 5.3E-19 120.6 20.5 171 43-247 55-257 (273)
105 3sz7_A HSC70 cochaperone (SGT) 99.7 8.7E-16 3E-20 118.9 11.8 108 109-247 7-114 (164)
106 3nf1_A KLC 1, kinesin light ch 99.7 7.3E-16 2.5E-20 129.6 12.1 164 32-243 31-226 (311)
107 1p5q_A FKBP52, FK506-binding p 99.7 9.7E-18 3.3E-22 145.6 0.5 168 45-247 79-265 (336)
108 2qfc_A PLCR protein; TPR, HTH, 99.7 4.3E-15 1.5E-19 125.9 16.9 167 29-242 76-267 (293)
109 2c2l_A CHIP, carboxy terminus 99.7 3.7E-16 1.3E-20 132.2 10.1 181 31-244 7-202 (281)
110 1qqe_A Vesicular transport pro 99.7 7.2E-16 2.5E-20 130.9 11.9 158 42-245 89-273 (292)
111 3u3w_A Transcriptional activat 99.6 1.8E-15 6.2E-20 128.2 14.2 165 32-243 79-268 (293)
112 1hxi_A PEX5, peroxisome target 99.6 1.3E-15 4.6E-20 112.6 11.7 101 115-246 19-119 (121)
113 4gcn_A Protein STI-1; structur 99.6 5.4E-16 1.9E-20 115.7 9.3 103 111-244 6-115 (127)
114 3dss_A Geranylgeranyl transfer 99.6 1E-14 3.4E-19 126.0 18.1 172 47-246 90-272 (331)
115 3q49_B STIP1 homology and U bo 99.6 3.4E-15 1.2E-19 111.3 13.2 123 59-226 3-130 (137)
116 2fo7_A Synthetic consensus TPR 99.6 1.2E-14 4.1E-19 106.5 15.9 128 34-208 7-134 (136)
117 4a1s_A PINS, partner of inscut 99.6 5.5E-16 1.9E-20 136.2 9.8 190 31-248 51-299 (411)
118 2hr2_A Hypothetical protein; a 99.6 1.2E-15 4.2E-20 117.7 10.5 105 113-248 11-138 (159)
119 2c2l_A CHIP, carboxy terminus 99.6 1.5E-15 5.1E-20 128.5 11.7 139 62-247 1-170 (281)
120 3sf4_A G-protein-signaling mod 99.6 7.6E-16 2.6E-20 134.3 10.0 190 31-248 12-263 (406)
121 3q15_A PSP28, response regulat 99.6 3.2E-15 1.1E-19 131.0 14.0 165 34-246 107-295 (378)
122 1na0_A Designed protein CTPR3; 99.6 2.7E-14 9.2E-19 103.5 16.5 122 60-226 3-125 (125)
123 3ro2_A PINS homolog, G-protein 99.6 1.4E-15 4.9E-20 128.4 10.3 191 30-248 7-259 (338)
124 3rjv_A Putative SEL1 repeat pr 99.6 1.1E-14 3.9E-19 117.9 14.9 166 32-243 22-199 (212)
125 2kck_A TPR repeat; tetratricop 99.6 3.3E-15 1.1E-19 106.6 10.2 108 108-246 1-111 (112)
126 3q49_B STIP1 homology and U bo 99.6 5.7E-15 1.9E-19 110.1 11.8 108 107-245 3-110 (137)
127 1wao_1 Serine/threonine protei 99.6 2.3E-16 7.7E-21 143.4 4.2 138 65-247 6-156 (477)
128 4gcn_A Protein STI-1; structur 99.6 7.1E-15 2.4E-19 109.5 11.4 115 63-216 6-120 (127)
129 1a17_A Serine/threonine protei 99.6 2.4E-14 8.1E-19 109.6 14.8 131 30-207 15-147 (166)
130 2ooe_A Cleavage stimulation fa 99.6 2.8E-14 9.6E-19 130.6 17.6 161 48-246 255-425 (530)
131 1zu2_A Mitochondrial import re 99.6 1.9E-14 6.4E-19 110.9 13.6 117 45-165 16-133 (158)
132 1hxi_A PEX5, peroxisome target 99.6 1E-14 3.5E-19 107.8 11.7 102 66-212 18-119 (121)
133 2vsy_A XCC0866; transferase, g 99.6 2E-14 6.9E-19 132.7 16.3 143 32-219 27-169 (568)
134 3dra_A Protein farnesyltransfe 99.6 3.9E-14 1.3E-18 121.4 16.4 155 33-224 72-232 (306)
135 3rkv_A Putative peptidylprolyl 99.6 1E-14 3.5E-19 112.5 11.6 120 64-228 10-148 (162)
136 1elw_A TPR1-domain of HOP; HOP 99.6 9.4E-14 3.2E-18 99.7 15.4 114 64-222 3-116 (118)
137 4f3v_A ESX-1 secretion system 99.6 3E-15 1E-19 126.2 8.1 188 43-257 19-252 (282)
138 1dce_A Protein (RAB geranylger 99.6 1.7E-15 5.8E-20 140.4 7.2 170 47-245 89-271 (567)
139 2if4_A ATFKBP42; FKBP-like, al 99.6 1.2E-15 4.2E-20 132.5 5.4 143 60-247 174-334 (338)
140 3rjv_A Putative SEL1 repeat pr 99.6 4.3E-14 1.5E-18 114.4 13.7 154 48-246 3-162 (212)
141 3sf4_A G-protein-signaling mod 99.6 1E-14 3.5E-19 127.1 10.5 195 42-248 99-343 (406)
142 2dba_A Smooth muscle cell asso 99.6 5.6E-14 1.9E-18 105.5 13.1 119 59-222 22-143 (148)
143 2hr2_A Hypothetical protein; a 99.6 1.3E-14 4.6E-19 111.9 9.5 113 65-222 11-146 (159)
144 2fbn_A 70 kDa peptidylprolyl i 99.6 4.2E-15 1.4E-19 118.6 6.8 123 96-249 21-159 (198)
145 2lni_A Stress-induced-phosphop 99.6 4E-14 1.4E-18 104.2 11.2 108 109-247 12-119 (133)
146 1elw_A TPR1-domain of HOP; HOP 99.6 1.2E-13 4.1E-18 99.1 13.6 106 112-248 3-108 (118)
147 2dba_A Smooth muscle cell asso 99.5 8.4E-14 2.9E-18 104.5 12.9 115 107-252 22-139 (148)
148 4a1s_A PINS, partner of inscut 99.5 4.4E-15 1.5E-19 130.4 6.5 187 42-247 98-338 (411)
149 3gw4_A Uncharacterized protein 99.5 4.6E-14 1.6E-18 111.8 11.8 158 42-244 4-179 (203)
150 3rkv_A Putative peptidylprolyl 99.5 2.8E-14 9.6E-19 110.1 10.1 103 113-246 11-131 (162)
151 3ulq_A Response regulator aspa 99.5 4.6E-14 1.6E-18 123.6 12.0 178 42-246 155-373 (383)
152 3ro2_A PINS homolog, G-protein 99.5 2.2E-14 7.6E-19 121.0 9.3 155 47-246 159-337 (338)
153 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 5.4E-15 1.9E-19 133.5 5.5 123 96-249 251-388 (457)
154 2xev_A YBGF; tetratricopeptide 99.5 1.1E-13 3.7E-18 101.9 11.6 109 114-253 3-117 (129)
155 1na0_A Designed protein CTPR3; 99.5 2.1E-13 7.3E-18 98.7 13.0 110 108-248 3-113 (125)
156 2vyi_A SGTA protein; chaperone 99.5 2.8E-13 9.6E-18 98.9 13.5 116 30-172 14-129 (131)
157 2xev_A YBGF; tetratricopeptide 99.5 4.1E-13 1.4E-17 98.7 14.1 116 66-226 3-124 (129)
158 1elr_A TPR2A-domain of HOP; HO 99.5 1.4E-13 4.8E-18 100.6 11.2 120 62-227 1-127 (131)
159 1wao_1 Serine/threonine protei 99.5 2.9E-14 9.8E-19 129.5 8.1 130 32-208 10-152 (477)
160 2xm6_A Protein corresponding t 99.5 8.1E-13 2.8E-17 119.7 17.5 172 45-255 237-446 (490)
161 1ihg_A Cyclophilin 40; ppiase 99.5 2.6E-13 9E-18 119.3 13.5 125 65-234 223-363 (370)
162 3k9i_A BH0479 protein; putativ 99.5 2.8E-14 9.7E-19 104.3 5.9 88 141-249 8-98 (117)
163 2kck_A TPR repeat; tetratricop 99.5 1.3E-13 4.4E-18 98.2 9.2 105 60-208 1-108 (112)
164 1elr_A TPR2A-domain of HOP; HO 99.5 2.4E-13 8.3E-18 99.4 9.9 103 110-243 1-110 (131)
165 2if4_A ATFKBP42; FKBP-like, al 99.5 9.9E-14 3.4E-18 120.4 8.5 132 32-209 183-331 (338)
166 2ifu_A Gamma-SNAP; membrane fu 99.4 2.2E-13 7.5E-18 116.3 9.4 132 71-247 42-190 (307)
167 2xm6_A Protein corresponding t 99.4 7.1E-12 2.4E-16 113.5 19.8 165 45-242 57-253 (490)
168 3q15_A PSP28, response regulat 99.4 9.4E-13 3.2E-17 115.2 13.6 174 42-242 153-366 (378)
169 3k9i_A BH0479 protein; putativ 99.4 9.8E-14 3.4E-18 101.4 6.0 93 93-216 4-99 (117)
170 3ro3_A PINS homolog, G-protein 99.4 5.4E-13 1.9E-17 100.7 9.5 136 65-244 9-161 (164)
171 1hz4_A MALT regulatory protein 99.4 4.1E-12 1.4E-16 110.4 15.9 165 33-244 19-206 (373)
172 2kat_A Uncharacterized protein 99.4 6.2E-13 2.1E-17 96.5 8.5 85 142-247 4-88 (115)
173 3e4b_A ALGK; tetratricopeptide 99.4 5.6E-12 1.9E-16 113.5 16.6 98 46-168 194-294 (452)
174 3q7a_A Farnesyltransferase alp 99.4 7.1E-12 2.4E-16 108.8 16.3 154 45-228 102-258 (349)
175 3ly7_A Transcriptional activat 99.4 2.5E-11 8.5E-16 105.5 17.8 156 57-246 186-344 (372)
176 3e4b_A ALGK; tetratricopeptide 99.3 3.9E-11 1.3E-15 108.0 17.8 170 46-242 160-352 (452)
177 1ihg_A Cyclophilin 40; ppiase 99.3 4.9E-12 1.7E-16 111.1 11.6 114 31-171 226-355 (370)
178 2qfc_A PLCR protein; TPR, HTH, 99.3 3.2E-11 1.1E-15 101.9 16.1 139 61-244 71-228 (293)
179 3ma5_A Tetratricopeptide repea 99.3 1.5E-12 5.2E-17 92.5 6.4 75 152-247 2-76 (100)
180 4b4t_Q 26S proteasome regulato 99.3 6.4E-12 2.2E-16 111.1 10.7 174 29-250 5-213 (434)
181 2kat_A Uncharacterized protein 99.3 1.7E-11 5.8E-16 88.8 10.7 101 97-227 3-104 (115)
182 2l6j_A TPR repeat-containing p 99.3 1.3E-12 4.5E-17 93.3 4.5 96 112-238 3-104 (111)
183 3u3w_A Transcriptional activat 99.3 3.4E-11 1.2E-15 101.7 11.0 122 95-246 91-230 (293)
184 1na3_A Designed protein CTPR2; 99.2 7.1E-11 2.4E-15 81.1 10.4 85 111-226 7-91 (91)
185 1hz4_A MALT regulatory protein 99.2 1.3E-10 4.5E-15 100.8 14.0 106 42-172 65-189 (373)
186 3ly7_A Transcriptional activat 99.2 4.5E-10 1.5E-14 97.6 16.2 141 33-208 201-341 (372)
187 3mv2_B Coatomer subunit epsilo 99.2 4.7E-10 1.6E-14 95.7 16.0 159 42-249 112-290 (310)
188 1na3_A Designed protein CTPR2; 99.2 1.7E-10 5.7E-15 79.2 10.1 85 62-170 6-90 (91)
189 3mv2_B Coatomer subunit epsilo 99.2 2E-10 6.9E-15 97.9 11.9 159 50-252 85-258 (310)
190 4f3v_A ESX-1 secretion system 99.2 1.4E-10 4.7E-15 97.7 10.6 136 34-219 108-248 (282)
191 2kc7_A BFR218_protein; tetratr 99.1 9.5E-11 3.3E-15 82.2 6.8 93 117-248 4-97 (99)
192 2l6j_A TPR repeat-containing p 99.1 5.1E-10 1.8E-14 79.5 10.8 85 64-172 3-93 (111)
193 1klx_A Cysteine rich protein B 99.1 2.5E-09 8.6E-14 80.4 14.4 115 93-242 9-127 (138)
194 3ro3_A PINS homolog, G-protein 99.1 2.4E-10 8.1E-15 85.9 8.6 129 33-208 14-160 (164)
195 2kc7_A BFR218_protein; tetratr 99.1 1.7E-10 5.7E-15 80.9 6.7 93 31-158 3-96 (99)
196 3ma5_A Tetratricopeptide repea 99.1 9.9E-10 3.4E-14 77.7 10.1 86 60-169 2-89 (100)
197 3gw4_A Uncharacterized protein 99.1 4E-10 1.4E-14 88.7 8.9 129 33-208 31-178 (203)
198 3u64_A Protein TP_0956; tetrat 99.1 8.1E-10 2.8E-14 92.6 10.6 119 58-208 145-271 (301)
199 3bee_A Putative YFRE protein; 99.1 1.4E-09 4.8E-14 76.4 10.2 82 153-252 2-83 (93)
200 1xi4_A Clathrin heavy chain; a 99.1 5.2E-09 1.8E-13 103.7 17.6 138 62-241 1102-1250(1630)
201 1klx_A Cysteine rich protein B 99.0 6.4E-09 2.2E-13 78.2 12.7 124 45-219 9-136 (138)
202 4e6h_A MRNA 3'-END-processing 99.0 3.4E-08 1.2E-12 93.0 19.0 173 47-244 325-536 (679)
203 1xi4_A Clathrin heavy chain; a 98.9 8.5E-08 2.9E-12 95.2 18.9 176 32-246 1109-1314(1630)
204 3bee_A Putative YFRE protein; 98.8 2.1E-08 7.1E-13 70.3 9.2 74 109-209 2-75 (93)
205 1b89_A Protein (clathrin heavy 98.8 6.4E-10 2.2E-14 99.0 1.4 144 44-238 16-174 (449)
206 4e6h_A MRNA 3'-END-processing 98.8 1.5E-07 5E-12 88.8 16.2 179 45-257 357-586 (679)
207 3n71_A Histone lysine methyltr 98.8 7.3E-08 2.5E-12 87.5 13.0 131 33-240 314-463 (490)
208 1b89_A Protein (clathrin heavy 98.8 1.9E-08 6.6E-13 89.5 8.8 160 30-238 124-308 (449)
209 1pc2_A Mitochondria fission pr 98.7 2.8E-08 9.6E-13 75.6 7.1 95 141-252 16-111 (152)
210 1pc2_A Mitochondria fission pr 98.7 2.4E-07 8.4E-12 70.4 11.7 96 93-216 12-109 (152)
211 2v5f_A Prolyl 4-hydroxylase su 98.7 8.1E-08 2.8E-12 68.5 8.5 72 156-247 4-81 (104)
212 4b4t_Q 26S proteasome regulato 98.6 1.1E-07 3.6E-12 83.8 8.5 162 42-242 67-246 (434)
213 2uy1_A Cleavage stimulation fa 98.4 3E-05 1E-09 70.4 20.1 155 47-238 195-380 (493)
214 3qww_A SET and MYND domain-con 98.4 1.5E-06 5.2E-11 77.6 10.0 95 140-254 315-429 (433)
215 2v5f_A Prolyl 4-hydroxylase su 98.4 3.5E-06 1.2E-10 59.8 9.9 77 64-164 4-87 (104)
216 3n71_A Histone lysine methyltr 98.3 4.3E-06 1.5E-10 75.8 11.4 95 140-254 326-440 (490)
217 2uy1_A Cleavage stimulation fa 98.2 0.00015 5.1E-09 65.8 19.0 192 29-246 15-246 (493)
218 3qwp_A SET and MYND domain-con 98.2 4.8E-06 1.6E-10 74.4 8.5 95 140-255 304-419 (429)
219 1nzn_A CGI-135 protein, fissio 98.0 0.00012 3.9E-09 53.7 12.2 98 91-216 13-112 (126)
220 3qww_A SET and MYND domain-con 98.0 2.5E-05 8.6E-10 69.7 9.3 94 44-161 311-425 (433)
221 1nzn_A CGI-135 protein, fissio 97.9 8.3E-05 2.8E-09 54.5 9.2 102 45-167 15-118 (126)
222 4h7y_A Dual specificity protei 97.8 0.00017 5.7E-09 54.3 10.1 121 107-246 7-128 (161)
223 3qwp_A SET and MYND domain-con 97.7 0.0001 3.5E-09 65.7 9.2 106 30-162 289-415 (429)
224 4h7y_A Dual specificity protei 97.6 0.0025 8.4E-08 48.0 13.1 135 59-227 7-142 (161)
225 4g26_A Pentatricopeptide repea 97.5 0.0069 2.4E-07 54.9 18.3 164 35-240 33-203 (501)
226 1y8m_A FIS1; mitochondria, unk 97.4 0.00093 3.2E-08 49.8 9.2 93 142-252 25-117 (144)
227 3o48_A Mitochondria fission 1 97.4 0.00088 3E-08 49.3 8.5 80 156-252 39-118 (134)
228 3o48_A Mitochondria fission 1 97.3 0.004 1.4E-07 45.8 10.9 101 45-167 21-122 (134)
229 1y8m_A FIS1; mitochondria, unk 97.2 0.0069 2.4E-07 45.1 11.7 101 45-167 20-121 (144)
230 4gns_B Protein CSD3, chitin bi 97.2 0.0032 1.1E-07 59.7 12.3 48 190-238 350-397 (754)
231 3ffl_A Anaphase-promoting comp 96.7 0.0067 2.3E-07 46.4 7.9 110 30-167 22-165 (167)
232 3ffl_A Anaphase-promoting comp 96.5 0.016 5.5E-07 44.2 8.6 60 159-238 65-148 (167)
233 4g26_A Pentatricopeptide repea 95.8 0.33 1.1E-05 43.8 15.5 141 63-242 23-170 (501)
234 1zbp_A Hypothetical protein VP 95.6 0.59 2E-05 38.5 14.5 66 34-116 3-68 (273)
235 4gns_B Protein CSD3, chitin bi 94.5 0.9 3.1E-05 43.1 14.5 132 31-174 250-388 (754)
236 3kae_A CDC27, possible protein 94.3 0.71 2.4E-05 35.5 10.7 106 108-248 28-150 (242)
237 1ya0_A SMG-7 transcript varian 94.2 0.27 9.4E-06 44.3 10.0 65 95-169 168-232 (497)
238 1ya0_A SMG-7 transcript varian 94.2 0.39 1.3E-05 43.3 10.9 65 140-225 169-233 (497)
239 1zbp_A Hypothetical protein VP 91.4 0.45 1.5E-05 39.2 6.5 56 190-246 10-65 (273)
240 3mkq_A Coatomer beta'-subunit; 91.0 4.4 0.00015 37.8 14.0 42 45-105 666-707 (814)
241 2ff4_A Probable regulatory pro 90.4 1.1 3.7E-05 39.0 8.5 50 190-240 184-233 (388)
242 3mkq_B Coatomer subunit alpha; 87.3 8.3 0.00029 29.5 11.0 42 33-82 10-51 (177)
243 4b4t_S RPN3, 26S proteasome re 87.2 1.5 5.1E-05 39.6 7.2 119 107-247 175-305 (523)
244 3mkq_A Coatomer beta'-subunit; 86.1 15 0.00053 34.0 14.0 35 94-133 667-701 (814)
245 2ff4_A Probable regulatory pro 85.1 3.2 0.00011 35.9 8.2 62 42-111 183-244 (388)
246 4b4t_R RPN7, 26S proteasome re 80.7 3.8 0.00013 35.9 7.0 67 155-241 129-197 (429)
247 4b4t_R RPN7, 26S proteasome re 77.7 7.8 0.00027 33.9 8.0 119 92-241 110-237 (429)
248 1wy6_A Hypothetical protein ST 77.0 12 0.0004 27.7 7.3 58 35-109 98-155 (172)
249 3spa_A Mtrpol, DNA-directed RN 76.5 38 0.0013 33.5 12.8 48 191-240 179-229 (1134)
250 4fhn_B Nucleoporin NUP120; pro 73.9 11 0.00036 37.6 8.6 47 191-237 913-963 (1139)
251 1qsa_A Protein (soluble lytic 73.1 58 0.002 30.0 16.4 49 191-240 299-347 (618)
252 3mkq_B Coatomer subunit alpha; 72.5 29 0.001 26.4 15.1 30 96-130 22-51 (177)
253 4gq2_M Nucleoporin NUP120; bet 71.7 11 0.00038 36.7 8.0 78 146-243 829-928 (950)
254 1wy6_A Hypothetical protein ST 70.9 28 0.00095 25.8 8.0 51 191-242 105-155 (172)
255 2br9_A 14-3-3E, 14-3-3 protein 70.7 37 0.0013 27.1 9.6 32 45-76 19-51 (234)
256 4fhn_B Nucleoporin NUP120; pro 69.6 16 0.00055 36.2 8.8 80 148-247 833-934 (1139)
257 3uzd_A 14-3-3 protein gamma; s 68.6 44 0.0015 26.9 9.6 34 42-76 16-50 (248)
258 2v6y_A AAA family ATPase, P60 67.5 6.9 0.00024 25.8 4.0 17 190-206 24-40 (83)
259 4b4t_S RPN3, 26S proteasome re 67.4 27 0.00092 31.5 8.9 18 191-208 284-301 (523)
260 1o9d_A 14-3-3-like protein C; 65.0 46 0.0016 27.0 9.2 32 45-76 22-56 (260)
261 2cfu_A SDSA1; SDS-hydrolase, l 64.5 17 0.00059 33.7 7.5 50 30-82 451-500 (658)
262 3r9m_A BRO1 domain-containing 64.4 57 0.0019 27.9 10.3 16 65-80 114-129 (376)
263 3rau_A Tyrosine-protein phosph 64.2 67 0.0023 27.3 10.9 45 65-109 117-163 (363)
264 2crb_A Nuclear receptor bindin 62.5 12 0.00041 25.3 4.3 25 215-239 18-42 (97)
265 3txn_A 26S proteasome regulato 60.8 82 0.0028 27.2 13.8 61 179-242 104-169 (394)
266 3efz_A 14-3-3 protein; 14-3-3, 58.4 58 0.002 26.6 8.6 68 120-206 149-226 (268)
267 1zb1_A BRO1 protein; AIP1, BRO 58.3 78 0.0027 27.2 10.1 26 214-239 259-284 (392)
268 2wpv_A GET4, UPF0363 protein Y 56.8 85 0.0029 26.1 13.2 48 31-81 16-69 (312)
269 2dl1_A Spartin; SPG20, MIT, st 55.9 7.6 0.00026 27.4 2.6 45 192-245 18-62 (116)
270 3uzd_A 14-3-3 protein gamma; s 55.6 79 0.0027 25.4 8.9 68 71-151 127-206 (248)
271 3iqu_A 14-3-3 protein sigma; s 54.9 79 0.0027 25.2 10.4 34 42-76 20-54 (236)
272 3iqu_A 14-3-3 protein sigma; s 53.5 53 0.0018 26.2 7.5 30 91-123 145-179 (236)
273 2g0u_A Type III secretion syst 52.7 29 0.001 23.3 4.9 35 93-130 30-64 (92)
274 3txn_A 26S proteasome regulato 52.1 80 0.0027 27.2 9.1 38 190-227 194-235 (394)
275 3re2_A Predicted protein; meni 51.5 71 0.0024 27.5 8.2 57 195-251 275-338 (472)
276 3kae_A CDC27, possible protein 51.3 81 0.0028 24.2 17.0 178 29-245 34-241 (242)
277 3ax2_A Mitochondrial import re 51.2 24 0.0008 22.7 4.2 30 216-245 21-50 (73)
278 3spa_A Mtrpol, DNA-directed RN 50.0 74 0.0025 31.5 9.1 49 191-241 141-194 (1134)
279 3c3r_A Programmed cell death 6 48.4 1.3E+02 0.0044 25.7 13.4 26 215-240 278-303 (380)
280 3ubw_A 14-3-3E, 14-3-3 protein 45.4 1.2E+02 0.0041 24.5 12.5 34 42-76 43-77 (261)
281 2v6y_A AAA family ATPase, P60 45.0 59 0.002 21.1 5.6 24 90-113 29-52 (83)
282 2rpa_A Katanin P60 ATPase-cont 44.2 20 0.0007 23.3 3.1 26 215-240 15-40 (78)
283 1qsa_A Protein (soluble lytic 43.4 2E+02 0.0067 26.4 12.4 26 216-241 385-410 (618)
284 2ca5_A MXIH; transport protein 43.0 69 0.0024 21.1 7.8 33 93-125 24-56 (85)
285 3t5x_A PCI domain-containing p 43.0 60 0.0021 25.0 6.3 32 158-209 15-46 (203)
286 3t5x_A PCI domain-containing p 42.5 28 0.00097 27.0 4.3 36 211-246 13-48 (203)
287 2br9_A 14-3-3E, 14-3-3 protein 42.0 1.3E+02 0.0044 23.9 9.4 32 89-123 140-176 (234)
288 4gq4_A Menin; tumor suppressor 40.3 65 0.0022 28.2 6.4 46 194-239 281-330 (489)
289 2yhe_A SEC-alkyl sulfatase; hy 46.3 6 0.00021 37.0 0.0 51 29-82 462-512 (668)
290 2xs1_A Programmed cell death 6 40.0 2.3E+02 0.008 26.3 12.9 26 215-240 263-288 (704)
291 2npm_A 14-3-3 domain containin 39.8 1.5E+02 0.0051 24.0 16.6 35 42-77 40-78 (260)
292 3ubw_A 14-3-3E, 14-3-3 protein 37.6 35 0.0012 27.7 4.1 30 215-244 34-63 (261)
293 2cfu_A SDSA1; SDS-hydrolase, l 37.5 81 0.0028 29.2 7.2 36 94-129 464-499 (658)
294 2cpt_A SKD1 protein, vacuolar 35.7 30 0.001 24.3 3.1 16 191-206 32-47 (117)
295 3efz_A 14-3-3 protein; 14-3-3, 34.2 1.9E+02 0.0064 23.5 8.1 32 90-124 163-201 (268)
296 3lew_A SUSD-like carbohydrate 32.6 81 0.0028 27.9 6.2 50 193-242 174-233 (495)
297 4gq2_M Nucleoporin NUP120; bet 32.6 2.1E+02 0.0072 27.7 9.5 22 191-212 911-932 (950)
298 2npm_A 14-3-3 domain containin 31.6 43 0.0015 27.2 3.8 27 216-242 32-58 (260)
299 2w2u_A Hypothetical P60 katani 30.5 1.1E+02 0.0039 19.8 7.5 24 90-113 37-60 (83)
300 1om2_A Protein (mitochondrial 29.3 41 0.0014 22.8 2.8 28 216-243 24-51 (95)
301 1wfd_A Hypothetical protein 15 29.0 1.3E+02 0.0044 20.0 7.7 46 46-113 11-56 (93)
302 2dl1_A Spartin; SPG20, MIT, st 28.4 1.1E+02 0.0037 21.5 4.9 46 45-112 17-62 (116)
303 3bu8_A Telomeric repeat-bindin 27.9 36 0.0012 26.9 2.6 19 223-241 125-143 (235)
304 3qtm_A Uncharacterized protein 27.8 2.5E+02 0.0086 23.0 21.4 193 47-248 101-336 (346)
305 2wpv_A GET4, UPF0363 protein Y 27.7 2.6E+02 0.0089 23.1 11.8 44 90-133 111-154 (312)
306 3myv_A SUSD superfamily protei 27.2 1.6E+02 0.0054 25.6 7.1 49 193-241 164-219 (454)
307 3arc_I Photosystem II reaction 26.8 55 0.0019 17.9 2.4 17 5-21 13-29 (38)
308 2cpt_A SKD1 protein, vacuolar 26.8 1.6E+02 0.0056 20.5 6.7 25 90-114 36-60 (117)
309 4a1g_A Mitotic checkpoint seri 26.7 1.9E+02 0.0065 21.2 10.6 49 194-243 82-132 (152)
310 3kez_A Putative sugar binding 26.4 1.6E+02 0.0055 25.6 7.0 48 193-240 170-224 (461)
311 4b4t_P 26S proteasome regulato 25.7 3.2E+02 0.011 23.6 10.3 12 95-106 153-164 (445)
312 3lew_A SUSD-like carbohydrate 25.5 1.7E+02 0.0057 25.8 7.0 28 212-240 347-374 (495)
313 3u84_A Menin; MLL, JUND, ledgf 25.3 2E+02 0.007 25.2 6.9 56 196-251 298-360 (550)
314 2cwy_A Hypothetical protein TT 25.2 1.2E+02 0.0041 20.2 4.6 43 30-76 3-45 (94)
315 4a5x_A MITD1, MIT domain-conta 24.0 1.5E+02 0.0053 19.3 7.7 24 89-112 33-56 (86)
316 3kez_A Putative sugar binding 23.2 1.8E+02 0.0062 25.3 6.7 29 212-240 338-366 (461)
317 2ijq_A Hypothetical protein; s 22.5 2.4E+02 0.0082 20.9 7.7 32 30-64 34-65 (161)
318 3qtm_A Uncharacterized protein 22.4 3.2E+02 0.011 22.4 10.1 68 45-116 270-337 (346)
319 3mcx_A SUSD superfamily protei 22.3 1.9E+02 0.0067 25.2 6.7 49 193-241 176-231 (477)
320 3ax2_A Mitochondrial import re 21.4 1.7E+02 0.0057 18.6 5.2 34 32-68 21-54 (73)
321 3snx_A SUSD homolog, putative 21.0 2.1E+02 0.007 25.0 6.6 30 213-242 192-221 (460)
322 2wb7_A PT26-6P; extra chromoso 20.6 2.3E+02 0.0078 25.3 6.5 38 45-82 453-491 (526)
323 3eab_A Spastin; spastin, MIT, 20.6 50 0.0017 22.1 1.8 18 191-208 11-28 (89)
324 3myv_A SUSD superfamily protei 20.2 2.2E+02 0.0076 24.6 6.6 29 212-240 335-365 (454)
No 1
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.94 E-value=1.5e-25 Score=176.98 Aligned_cols=166 Identities=19% Similarity=0.122 Sum_probs=153.5
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN 112 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~ 112 (259)
..+..+. .. |++++|++.|+++++.+|+++++++.+|.+|...|++. +|+..+++++..+|++
T Consensus 10 ~lG~~~~--~~-g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~--------------~a~~~~~~~~~~~~~~ 72 (184)
T 3vtx_A 10 DIGDKKR--TK-GDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPN--------------DAIESLKKFVVLDTTS 72 (184)
T ss_dssp HHHHHHH--HH-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCCCC
T ss_pred HHHHHHH--Hc-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHhcCchh
Confidence 3455555 55 99999999999999999999999999999999999875 9999999999999999
Q ss_pred hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCc
Q psy9159 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPT 192 (259)
Q Consensus 113 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 192 (259)
+.++..+|.++...+++. .+...++++++++|+++.++..+|.++... |+
T Consensus 73 ~~~~~~~~~~~~~~~~~~----------~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~--------------------g~ 122 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQ----------AAIDALQRAIALNTVYADAYYKLGLVYDSM--------------------GE 122 (184)
T ss_dssp HHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TC
T ss_pred HHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCccchHHHHHHHHHHHHh--------------------CC
Confidence 999999999999888876 467889999999999999999999999885 88
Q ss_pred HHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 193 AEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
+++|+++|+++++++| +++.++.++|.+|..+|++++|++.|++|++++|.++
T Consensus 123 ~~~A~~~~~~~l~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 123 HDKAIEAYEKTISIKP-GFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred chhHHHHHHHHHHhcc-hhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 9999999999999999 7899999999999999999999999999999998764
No 2
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.94 E-value=2.3e-25 Score=181.82 Aligned_cols=168 Identities=18% Similarity=0.131 Sum_probs=154.7
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P 110 (259)
....+..++ .. |++++|+..++++++.+|+++++++.+|.++...|++. +|+..++++++++|
T Consensus 8 ~~~lg~~~~--~~-g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~--------------~A~~~~~~al~~~P 70 (217)
T 2pl2_A 8 PLRLGVQLY--AL-GRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVN--------------PALENGKTLVARTP 70 (217)
T ss_dssp HHHHHHHHH--HT-TCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCT
T ss_pred HHHHHHHHH--Hc-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCC
Confidence 345666676 66 99999999999999999999999999999999999875 99999999999999
Q ss_pred CChHHHHHHHHHHHHh-----------hchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHH
Q psy9159 111 NNSNTQKWYGICVGAN-----------GQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERK 179 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~-----------~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~ 179 (259)
+++.++..+|.++... |++. ++...++++++++|+++.+|..+|.++...
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~----------~A~~~~~~al~~~P~~~~~~~~lg~~~~~~--------- 131 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLE----------QALSVLKDAERVNPRYAPLHLQRGLVYALL--------- 131 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT---------
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHH----------HHHHHHHHHHHhCcccHHHHHHHHHHHHHc---------
Confidence 9999999999999988 6665 578999999999999999999999999875
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 180 IAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 180 ~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|++++|+.+|+++++++ +++.++.++|.+|..+|++++|+..|+++++++|++++
T Consensus 132 -----------g~~~~A~~~~~~al~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 186 (217)
T 2pl2_A 132 -----------GERDKAEASLKQALALE--DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLD 186 (217)
T ss_dssp -----------TCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHH
T ss_pred -----------CChHHHHHHHHHHHhcc--cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 88999999999999999 46899999999999999999999999999999998774
No 3
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.91 E-value=1.2e-23 Score=171.68 Aligned_cols=177 Identities=16% Similarity=0.149 Sum_probs=159.0
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQP-NDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p-~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
+..+..+..++ .. |++++|+..|+++++.+| .++.+++.+|.++...|++. +|+..++++++
T Consensus 8 ~~~~~~g~~~~--~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~al~ 70 (228)
T 4i17_A 8 NQLKNEGNDAL--NA-KNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYK--------------EAADYFDIAIK 70 (228)
T ss_dssp HHHHHHHHHHH--HT-TCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHH--Hc-cCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHH--------------HHHHHHHHHHH
Confidence 34566777777 67 999999999999999999 99999999999999999875 99999999999
Q ss_pred hCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh-------hHHHHHHHHHHHhhccchHHHHH
Q psy9159 108 LAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF-------TLYSLKGRYQYEISKLSFFERKI 180 (259)
Q Consensus 108 ~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~-------~~~~~lG~~~~~~~~~~~~~~~~ 180 (259)
++|+++.++..+|.++...|++. .+...++++++++|+++ .+|+.+|.++...
T Consensus 71 ~~p~~~~~~~~l~~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~---------- 130 (228)
T 4i17_A 71 KNYNLANAYIGKSAAYRDMKNNQ----------EYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQA---------- 130 (228)
T ss_dssp TTCSHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHT----------
T ss_pred hCcchHHHHHHHHHHHHHcccHH----------HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHh----------
Confidence 99999999999999999999887 56789999999999999 5577777776653
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHHHhhCCCC--cHHhHHHHHHHHHHhCCH---------------------------HHH
Q psy9159 181 AVLIVSDLDEPTAEDAIANCLKAEELAPAP--WKENQLLIAKCYIEAGEY---------------------------AKA 231 (259)
Q Consensus 181 ~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~--~~~~~~~la~~~~~~g~~---------------------------~eA 231 (259)
|++++|+.+|+++++++| + ++.++.++|.+|...|+. ++|
T Consensus 131 ----------~~~~~A~~~~~~al~~~p-~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A 199 (228)
T 4i17_A 131 ----------GNIEKAEENYKHATDVTS-KKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKA 199 (228)
T ss_dssp ----------TCHHHHHHHHHHHTTSSC-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ----------ccHHHHHHHHHHHHhcCC-CcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999 7 789999999999999998 999
Q ss_pred HHHHHHHhcCCCCCccchhhhh
Q psy9159 232 VQWLDKAKAIPVVSYESHDLST 253 (259)
Q Consensus 232 ~~~~~kal~l~p~~~~~~~~~~ 253 (259)
+++++++++++|++++....+.
T Consensus 200 ~~~~~~a~~l~p~~~~~~~~l~ 221 (228)
T 4i17_A 200 VDYLGEAVTLSPNRTEIKQMQD 221 (228)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHhhcCCCCHHHHHHHH
Confidence 9999999999999887655543
No 4
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.91 E-value=8.4e-24 Score=187.24 Aligned_cols=166 Identities=10% Similarity=0.005 Sum_probs=151.5
Q ss_pred HHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhc-hhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9159 34 EIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYD-IKRRENDKEASEKYILQGIEYAKKAMELAPNN 112 (259)
Q Consensus 34 ~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~-~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~ 112 (259)
.+..+. .. |++++|+..+++++..+|+++.+|+.+|.++..+|+ +. +|+..++++++++|++
T Consensus 103 lg~~~~--~~-g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~--------------eAl~~~~~al~l~P~~ 165 (382)
T 2h6f_A 103 FRAVLQ--RD-ERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLH--------------EEMNYITAIIEEQPKN 165 (382)
T ss_dssp HHHHHH--HT-CCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHH--------------HHHHHHHHHHHHCTTC
T ss_pred HHHHHH--HC-CChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHH--------------HHHHHHHHHHHHCCCC
Confidence 343444 55 999999999999999999999999999999999996 65 9999999999999999
Q ss_pred hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCc
Q psy9159 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPT 192 (259)
Q Consensus 113 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 192 (259)
+.+|.++|.++..+|++. .++..++++|+++|+++.+|+.+|.++..+ |+
T Consensus 166 ~~a~~~~g~~~~~~g~~~----------eAl~~~~kal~ldP~~~~a~~~lg~~~~~~--------------------g~ 215 (382)
T 2h6f_A 166 YQVWHHRRVLVEWLRDPS----------QELEFIADILNQDAKNYHAWQHRQWVIQEF--------------------KL 215 (382)
T ss_dssp HHHHHHHHHHHHHHTCCT----------THHHHHHHHHHHCTTCHHHHHHHHHHHHHH--------------------TC
T ss_pred HHHHHHHHHHHHHccCHH----------HHHHHHHHHHHhCccCHHHHHHHHHHHHHc--------------------CC
Confidence 999999999999999988 467899999999999999999999999876 78
Q ss_pred HHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHH-hCCHHHH-----HHHHHHHhcCCCCCcc
Q psy9159 193 AEDAIANCLKAEELAPAPWKENQLLIAKCYIE-AGEYAKA-----VQWLDKAKAIPVVSYE 247 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~-~g~~~eA-----~~~~~kal~l~p~~~~ 247 (259)
+++|+.+|+++++++| ++..+|.++|.++.. .|..++| +++|+++++++|++.+
T Consensus 216 ~~eAl~~~~~al~l~P-~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~ 275 (382)
T 2h6f_A 216 WDNELQYVDQLLKEDV-RNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNES 275 (382)
T ss_dssp CTTHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred hHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHH
Confidence 9999999999999999 789999999999999 5555888 5999999999998874
No 5
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.91 E-value=1.8e-23 Score=169.54 Aligned_cols=170 Identities=14% Similarity=0.091 Sum_probs=149.4
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHH----------------HHHHHHHhhchhcccCcHHHHHH
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYR----------------LAKACHCLYDIKRRENDKEASEK 93 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~----------------la~~~~~~g~~~~~~~~~~~~~~ 93 (259)
..+.++..++ .. |++++|+..|+++++.+|+++++++. +|.+|...|++.
T Consensus 6 ~~~~~g~~~~--~~-g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~----------- 71 (208)
T 3urz_A 6 EMLQKVSAAI--EA-GQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYD----------- 71 (208)
T ss_dssp HHHHHHHHHH--HT-TCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHH-----------
T ss_pred HHHHHHHHHH--HC-CCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHH-----------
Confidence 4577888888 67 99999999999999999999999999 999999999875
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhcc
Q psy9159 94 YILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKL 173 (259)
Q Consensus 94 ~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~ 173 (259)
+|+..++++++++|+++.++..+|.++...|++. .|...|+++++++|+++.+|+.+|.+++..+.
T Consensus 72 ---~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~----------~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~- 137 (208)
T 3urz_A 72 ---KAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEK----------DALRMYEKILQLEADNLAANIFLGNYYYLTAE- 137 (208)
T ss_dssp ---HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH-
T ss_pred ---HHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH-
Confidence 9999999999999999999999999999999987 57899999999999999999999999877543
Q ss_pred chHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 174 SFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 174 ~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
+..+.++..|++++..+| ...+++.+|.++..+|++++|+++|++|++++|++.
T Consensus 138 -----------------~~~~~~~~~~~~~~~~~~--~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 138 -----------------QEKKKLETDYKKLSSPTK--MQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp -----------------HHHHHHHHHHC---CCCH--HHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred -----------------HHHHHHHHHHHHHhCCCc--hhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 346788889999876555 245688899999999999999999999999999743
No 6
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.91 E-value=1.9e-23 Score=198.42 Aligned_cols=166 Identities=15% Similarity=0.097 Sum_probs=154.1
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN 112 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~ 112 (259)
..+..+. .. |++++|+..|+++++.+|+++++++++|.+|..+|++. +|++.|++|++++|++
T Consensus 14 nLG~~~~--~~-G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~--------------eA~~~~~~Al~l~P~~ 76 (723)
T 4gyw_A 14 NLANIKR--EQ-GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ--------------EALMHYKEAIRISPTF 76 (723)
T ss_dssp HHHHHHH--HT-TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTC
T ss_pred HHHHHHH--Hc-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCC
Confidence 3454555 56 99999999999999999999999999999999999975 9999999999999999
Q ss_pred hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCc
Q psy9159 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPT 192 (259)
Q Consensus 113 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 192 (259)
+.+|.++|.++...|++. +|.+.|++||+++|+++.+|+.+|.++... |+
T Consensus 77 ~~a~~nLg~~l~~~g~~~----------~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~--------------------g~ 126 (723)
T 4gyw_A 77 ADAYSNMGNTLKEMQDVQ----------GALQCYTRAIQINPAFADAHSNLASIHKDS--------------------GN 126 (723)
T ss_dssp HHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TC
T ss_pred HHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------------CC
Confidence 999999999999999987 567899999999999999999999999875 88
Q ss_pred HHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 193 AEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
+++|+.+|++|++++| ++..++.+||.+|..+|++++|++.+++++++.|+..
T Consensus 127 ~~eAi~~~~~Al~l~P-~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 127 IPEAIASYRTALKLKP-DFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp HHHHHHHHHHHHHHCS-CCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-CChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHH
Confidence 9999999999999999 7899999999999999999999999999999876643
No 7
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.90 E-value=2.5e-22 Score=163.71 Aligned_cols=171 Identities=18% Similarity=0.151 Sum_probs=133.7
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
...+..+. .. |++++|+..++++++.+|+++++++.+|.++...+... .......+.+++|+..++++++++|+
T Consensus 43 ~~lg~~~~--~~-g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~---~~~~~~~g~~~~A~~~~~~al~~~P~ 116 (217)
T 2pl2_A 43 YWLARTQL--KL-GLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQA---EDRERGKGYLEQALSVLKDAERVNPR 116 (217)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTC---SSHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHH--Hc-CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhh---hhhcccccCHHHHHHHHHHHHHhCcc
Confidence 34455555 56 99999999999999999999999999999999982111 01111123345999999999999999
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCC
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEP 191 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g 191 (259)
++.++..+|.++...|++. ++...++++++++ +++.+++.+|.++... |
T Consensus 117 ~~~~~~~lg~~~~~~g~~~----------~A~~~~~~al~~~-~~~~~~~~la~~~~~~--------------------g 165 (217)
T 2pl2_A 117 YAPLHLQRGLVYALLGERD----------KAEASLKQALALE-DTPEIRSALAELYLSM--------------------G 165 (217)
T ss_dssp CHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHC-CCHHHHHHHHHHHHHH--------------------T
T ss_pred cHHHHHHHHHHHHHcCChH----------HHHHHHHHHHhcc-cchHHHHHHHHHHHHc--------------------C
Confidence 9999999999999999987 5778999999999 9999999999999886 8
Q ss_pred cHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 192 TAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 192 ~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
++++|+.+|+++++++| ++..++..+|.++..+|++++|++.++++.-
T Consensus 166 ~~~~A~~~~~~al~~~P-~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 213 (217)
T 2pl2_A 166 RLDEALAQYAKALEQAP-KDLDLRVRYASALLLKGKAEEAARAAALEHH 213 (217)
T ss_dssp CHHHHHHHHHHHHHHST-TCHHHHHHHHHHHTC----------------
T ss_pred CHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 89999999999999999 7899999999999999999999999998753
No 8
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.88 E-value=4.9e-21 Score=166.39 Aligned_cols=201 Identities=15% Similarity=0.100 Sum_probs=165.9
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL 108 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~ 108 (259)
...+..+..++ .. |++++|+..++++++.+|+++.+++.+|.+|...|++. +|+..+++++++
T Consensus 66 ~~~~~~~~~~~--~~-g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al~~ 128 (365)
T 4eqf_A 66 PGAFEEGLKRL--KE-GDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQ--------------AAIVALQRCLEL 128 (365)
T ss_dssp TTHHHHHHHHH--HH-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHH
T ss_pred hHHHHHHHHHH--HC-CCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHhc
Confidence 34677787777 56 99999999999999999999999999999999999875 999999999999
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHHh----------------------------------cHHHHHHHHHHHHccCC
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKIK----------------------------------CGVVFRDQMNKAIQMAP 154 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~~----------------------------------~~~~a~~~~~kAl~l~P 154 (259)
+|+++.++..+|.++...|++..+..... ....+...++++++++|
T Consensus 129 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 208 (365)
T 4eqf_A 129 QPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNG 208 (365)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCc
Confidence 99999999999999999998876543221 12357789999999999
Q ss_pred C--ChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC--------------CCCcHHHHHHHHHHHHhhCCCCcHHhHHHH
Q psy9159 155 K--DFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL--------------DEPTAEDAIANCLKAEELAPAPWKENQLLI 218 (259)
Q Consensus 155 ~--~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~~~eAi~~~~kAi~l~P~~~~~~~~~l 218 (259)
+ ++.+++.+|.++...++.+.....+..++-..+ ..|++++|+.+|+++++++| ++..++..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~l 287 (365)
T 4eqf_A 209 DMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQP-GFIRSRYNL 287 (365)
T ss_dssp SSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-CchHHHHHH
Confidence 9 899999999999998776543333322211111 15899999999999999999 678889999
Q ss_pred HHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 219 AKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 219 a~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|.+|..+|++++|++.|++++++.|.+..
T Consensus 288 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 316 (365)
T 4eqf_A 288 GISCINLGAYREAVSNFLTALSLQRKSRN 316 (365)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCcccCC
Confidence 99999999999999999999999887654
No 9
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.88 E-value=1.7e-21 Score=162.36 Aligned_cols=177 Identities=11% Similarity=0.038 Sum_probs=153.9
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCC---HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHH
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPND---PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKA 105 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~---~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ka 105 (259)
+..+..+..++ .. |++++|+..|+++++.+|++ +++++.+|.+|..+|++. +|+..++++
T Consensus 16 ~~~~~~a~~~~--~~-g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~--------------~A~~~~~~~ 78 (261)
T 3qky_A 16 QEAFERAMEFY--NQ-GKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYL--------------LAASEYERF 78 (261)
T ss_dssp HHHHHHHHHHH--HT-TCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHH
T ss_pred HHHHHHHHHHH--Hh-CCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHH--------------HHHHHHHHH
Confidence 45577788888 67 99999999999999999999 999999999999999876 999999999
Q ss_pred HHhCCCC---hHHHHHHHHHHHH--------hhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHH--------------
Q psy9159 106 MELAPNN---SNTQKWYGICVGA--------NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLY-------------- 160 (259)
Q Consensus 106 l~~~P~~---~~~~~~la~~~~~--------~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~-------------- 160 (259)
+++.|++ +.+++.+|.++.. .|++. .|...++++++++|+++.++
T Consensus 79 l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~----------~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~ 148 (261)
T 3qky_A 79 IQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTR----------KAIEAFQLFIDRYPNHELVDDATQKIRELRAKLA 148 (261)
T ss_dssp HHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHH----------HHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCchhHHHHHHHHHHHHHhcccccccchhHH----------HHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHH
Confidence 9998865 5678899999988 66665 57899999999999998887
Q ss_pred ---HHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCC--cHHhHHHHHHHHHHh----------
Q psy9159 161 ---SLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAP--WKENQLLIAKCYIEA---------- 225 (259)
Q Consensus 161 ---~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~--~~~~~~~la~~~~~~---------- 225 (259)
+.+|.+++.. |++++|+.+|+++++..|++ ...+++.+|.+|..+
T Consensus 149 ~~~~~la~~~~~~--------------------g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~ 208 (261)
T 3qky_A 149 RKQYEAARLYERR--------------------ELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQP 208 (261)
T ss_dssp HHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHH
T ss_pred HHHHHHHHHHHHc--------------------cCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhccc
Confidence 6667777664 88999999999999999932 356899999999988
Q ss_pred CCHHHHHHHHHHHhcCCCCCccchhhh
Q psy9159 226 GEYAKAVQWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 226 g~~~eA~~~~~kal~l~p~~~~~~~~~ 252 (259)
|++++|+..|+++++..|+++.-....
T Consensus 209 ~~~~~A~~~~~~~~~~~p~~~~~~~a~ 235 (261)
T 3qky_A 209 ERYRRAVELYERLLQIFPDSPLLRTAE 235 (261)
T ss_dssp HHHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred chHHHHHHHHHHHHHHCCCChHHHHHH
Confidence 999999999999999999987654443
No 10
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.88 E-value=1e-20 Score=165.87 Aligned_cols=188 Identities=17% Similarity=0.089 Sum_probs=126.3
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
|++++|+..++++++.+|+++.++..+|.++...|++. +|+..++++++++|+++.++..+|.++.
T Consensus 149 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~lg~~~~ 214 (388)
T 1w3b_A 149 GRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIW--------------LAIHHFEKAVTLDPNFLDAYINLGNVLK 214 (388)
T ss_dssp SCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 77777777777777777777777777777777666654 4555555555555555555555555544
Q ss_pred HhhchhhHHHHH------------------------hcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHH
Q psy9159 125 ANGQFQSLKEKI------------------------KCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKI 180 (259)
Q Consensus 125 ~~~~~~~~~~~~------------------------~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~ 180 (259)
..+++..+.... +....+...++++++++|+++.++..+|.++...++.+.....+
T Consensus 215 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 294 (388)
T 1w3b_A 215 EARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCY 294 (388)
T ss_dssp TTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 444443322110 11125667888888888888888888888888777654333322
Q ss_pred HHHHhcC--------------CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 181 AVLIVSD--------------LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 181 ~~~~~~~--------------~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
..++... ...|++++|+.+|+++++++| ++..++..+|.+|...|++++|++.|+++++++|+++
T Consensus 295 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~ 373 (388)
T 1w3b_A 295 NTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFP-EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFA 373 (388)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCT-TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCH
T ss_pred HHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Confidence 2211111 125889999999999999999 6788889999999999999999999999999888765
Q ss_pred c
Q psy9159 247 E 247 (259)
Q Consensus 247 ~ 247 (259)
+
T Consensus 374 ~ 374 (388)
T 1w3b_A 374 D 374 (388)
T ss_dssp H
T ss_pred H
Confidence 3
No 11
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.88 E-value=8.1e-21 Score=166.52 Aligned_cols=177 Identities=15% Similarity=0.107 Sum_probs=128.2
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
|++++|...++++++.+|.++++++.+|.+|...|++. +|+..++++++++|+++.++..+|.++.
T Consensus 47 ~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~l~~~~~ 112 (388)
T 1w3b_A 47 RRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQ--------------EAIEHYRHALRLKPDFIDGYINLAAALV 112 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHHcCcchHHHHHHHHHHHH
Confidence 66777777777777777777777777777776666654 8888888888888888888888888888
Q ss_pred HhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcC--------------CCC
Q psy9159 125 ANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSD--------------LDE 190 (259)
Q Consensus 125 ~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~--------------~~~ 190 (259)
..|++. .+...++++++++|+++.++..+|.++...++.+...+.+..++... ...
T Consensus 113 ~~g~~~----------~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 182 (388)
T 1w3b_A 113 AAGDME----------GAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQ 182 (388)
T ss_dssp HHSCSS----------HHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HcCCHH----------HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 888776 45678888888888888888888888877666543332222211111 125
Q ss_pred CcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 191 PTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
|++++|+.+|+++++++| ++..++..+|.++...|++++|+..++++++++|+++
T Consensus 183 g~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 237 (388)
T 1w3b_A 183 GEIWLAIHHFEKAVTLDP-NFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 237 (388)
T ss_dssp TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCH
T ss_pred CCHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCH
Confidence 778888888888888888 6677778888888888888888888888888777654
No 12
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.88 E-value=5.9e-21 Score=148.76 Aligned_cols=170 Identities=17% Similarity=0.125 Sum_probs=155.3
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
...+..++ .. |++++|+..++++++.+|+++.+++.+|.++...|++. +|+..++++++.+|+
T Consensus 12 ~~~~~~~~--~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~~~~~~~~ 74 (186)
T 3as5_A 12 RDKGISHA--KA-GRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVD--------------RGTELLERSLADAPD 74 (186)
T ss_dssp HHHHHHHH--HH-TCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTT
T ss_pred HHHHHHHH--Hh-cCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHhcCCC
Confidence 34455555 55 99999999999999999999999999999999999875 999999999999999
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCC
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEP 191 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g 191 (259)
++.++..+|.++...|++. .+...++++++++|+++.++..+|.++... |
T Consensus 75 ~~~~~~~~a~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~--------------------~ 124 (186)
T 3as5_A 75 NVKVATVLGLTYVQVQKYD----------LAVPLLIKVAEANPINFNVRFRLGVALDNL--------------------G 124 (186)
T ss_dssp CHHHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------T
T ss_pred CHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHhcCcHhHHHHHHHHHHHHHc--------------------C
Confidence 9999999999999998887 567899999999999999999999998874 8
Q ss_pred cHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccch
Q psy9159 192 TAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESH 249 (259)
Q Consensus 192 ~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~ 249 (259)
++++|+.+++++++.+| ....++..+|.++...|++++|+++++++++++|+++...
T Consensus 125 ~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 181 (186)
T 3as5_A 125 RFDEAIDSFKIALGLRP-NEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASVEL 181 (186)
T ss_dssp CHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCCGGG
T ss_pred cHHHHHHHHHHHHhcCc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchhhH
Confidence 89999999999999999 7789999999999999999999999999999998876543
No 13
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.88 E-value=8.6e-22 Score=187.09 Aligned_cols=143 Identities=18% Similarity=0.226 Sum_probs=134.8
Q ss_pred cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcH
Q psy9159 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCG 139 (259)
Q Consensus 60 ~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~ 139 (259)
..|++++++.+||.+|..+|++. +|+..|++||+++|+++.+|.++|.++...|++.
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~--------------eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~--------- 60 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIE--------------EAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ--------- 60 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH---------
T ss_pred CCCCcHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH---------
Confidence 47999999999999999999975 9999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHH
Q psy9159 140 VVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIA 219 (259)
Q Consensus 140 ~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la 219 (259)
+|+..|++||+++|+++.+|+.+|.++..+ |++++|+++|++|++++| ++..++.+||
T Consensus 61 -eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~--------------------g~~~~A~~~~~kAl~l~P-~~~~a~~~Lg 118 (723)
T 4gyw_A 61 -EALMHYKEAIRISPTFADAYSNMGNTLKEM--------------------QDVQGALQCYTRAIQINP-AFADAHSNLA 118 (723)
T ss_dssp -HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCT-TCHHHHHHHH
T ss_pred -HHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCC-CCHHHHHHHH
Confidence 578999999999999999999999999875 889999999999999999 7899999999
Q ss_pred HHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 220 KCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 220 ~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
.+|..+|++++|++.|++|++++|++++
T Consensus 119 ~~~~~~g~~~eAi~~~~~Al~l~P~~~~ 146 (723)
T 4gyw_A 119 SIHKDSGNIPEAIASYRTALKLKPDFPD 146 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 9999999999999999999999998875
No 14
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.87 E-value=1.5e-21 Score=172.83 Aligned_cols=168 Identities=11% Similarity=0.050 Sum_probs=149.5
Q ss_pred hhHHHHHhhcCCcCC-HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC
Q psy9159 32 YPEIDRLLYYGKKDD-KAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~-~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P 110 (259)
...+..+. .. |+ +++|+..+++++..+|+++.+|+.+|.++..+|++. +|+..++++|+++|
T Consensus 135 ~~~g~~l~--~~-g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~--------------eAl~~~~kal~ldP 197 (382)
T 2h6f_A 135 HFRRVLLK--SL-QKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPS--------------QELEFIADILNQDA 197 (382)
T ss_dssp HHHHHHHH--HT-TCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCT--------------THHHHHHHHHHHCT
T ss_pred HHHHHHHH--Hc-ccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHH--------------HHHHHHHHHHHhCc
Confidence 44555555 45 86 999999999999999999999999999999999986 99999999999999
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCC
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDE 190 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (259)
+++.+|.++|.++..+|++. .++..++++|+++|+++.+|+.+|.++..++
T Consensus 198 ~~~~a~~~lg~~~~~~g~~~----------eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~------------------- 248 (382)
T 2h6f_A 198 KNYHAWQHRQWVIQEFKLWD----------NELQYVDQLLKEDVRNNSVWNQRYFVISNTT------------------- 248 (382)
T ss_dssp TCHHHHHHHHHHHHHHTCCT----------THHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-------------------
T ss_pred cCHHHHHHHHHHHHHcCChH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-------------------
Confidence 99999999999999999987 4678999999999999999999999988742
Q ss_pred CcHHHH-----HHHHHHHHhhCCCCcHHhHHHHHHHHHHhC--CHHHHHHHHHHHhcCCCCCcc
Q psy9159 191 PTAEDA-----IANCLKAEELAPAPWKENQLLIAKCYIEAG--EYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 191 g~~~eA-----i~~~~kAi~l~P~~~~~~~~~la~~~~~~g--~~~eA~~~~~kal~l~p~~~~ 247 (259)
|.+++| +.+|++|++++| ++..+|+++|.++...| ++++|++.++++ +.+|+++.
T Consensus 249 ~~~~eA~~~~el~~~~~Al~l~P-~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~~p~~~~ 310 (382)
T 2h6f_A 249 GYNDRAVLEREVQYTLEMIKLVP-HNESAWNYLKGILQDRGLSKYPNLLNQLLDL-QPSHSSPY 310 (382)
T ss_dssp CSCSHHHHHHHHHHHHHHHHHST-TCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TTTCCCHH
T ss_pred CcchHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHccCccchHHHHHHHHHh-ccCCCCHH
Confidence 333555 699999999999 78999999999999988 699999999998 77776653
No 15
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.87 E-value=2.8e-20 Score=158.19 Aligned_cols=203 Identities=14% Similarity=0.100 Sum_probs=137.8
Q ss_pred HHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhh-chhcc-----------cCc---------HHHHH
Q psy9159 34 EIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLY-DIKRR-----------END---------KEASE 92 (259)
Q Consensus 34 ~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g-~~~~~-----------~~~---------~~~~~ 92 (259)
.+..++ .. |++++|+..++++++.+|+++.+++.+|.++...| ++.+. +.. .-...
T Consensus 62 ~~~~~~--~~-~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 138 (330)
T 3hym_B 62 HIGTLV--EL-NKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVE 138 (330)
T ss_dssp HHHHHH--HH-TCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHH
T ss_pred HHHHHH--Hh-hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc
Confidence 444444 34 66666666666666666666666666666666666 44300 000 00011
Q ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhc
Q psy9159 93 KYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISK 172 (259)
Q Consensus 93 ~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~ 172 (259)
+.+++|+..+++++++.|++..++..+|.++...|++. .+...++++++++|+++.++..+|.++...++
T Consensus 139 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~ 208 (330)
T 3hym_B 139 SEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSK----------LAERFFSQALSIAPEDPFVMHEVGVVAFQNGE 208 (330)
T ss_dssp TCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHH----------HHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHH----------HHHHHHHHHHHhCCCChHHHHHHHHHHHHccc
Confidence 12235555555555555555555555555555555444 56789999999999999999999999998877
Q ss_pred cchHHHHHHHHHhc-----------C------------CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHH
Q psy9159 173 LSFFERKIAVLIVS-----------D------------LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYA 229 (259)
Q Consensus 173 ~~~~~~~~~~~~~~-----------~------------~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~ 229 (259)
.......+..++.. . ...|++++|+.+|+++++++| ++..++..+|.++..+|+++
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~-~~~~~~~~la~~~~~~g~~~ 287 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIP-QNASTYSAIGYIHSLMGNFE 287 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCSHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCc-cchHHHHHHHHHHHHhccHH
Confidence 65433332221110 0 116999999999999999999 77899999999999999999
Q ss_pred HHHHHHHHHhcCCCCCccchh
Q psy9159 230 KAVQWLDKAKAIPVVSYESHD 250 (259)
Q Consensus 230 eA~~~~~kal~l~p~~~~~~~ 250 (259)
+|+++++++++++|+++....
T Consensus 288 ~A~~~~~~al~~~p~~~~~~~ 308 (330)
T 3hym_B 288 NAVDYFHTALGLRRDDTFSVT 308 (330)
T ss_dssp HHHHHHHTTTTTCSCCHHHHH
T ss_pred HHHHHHHHHHccCCCchHHHH
Confidence 999999999999998875433
No 16
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.87 E-value=4.1e-20 Score=160.02 Aligned_cols=198 Identities=16% Similarity=0.115 Sum_probs=165.7
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA 109 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~ 109 (259)
..+..+..++ .. |++++|+..++++++.+|+++.+++.+|.++...|++. +|+..++++++++
T Consensus 66 ~~~~~~~~~~--~~-g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al~~~ 128 (368)
T 1fch_A 66 QPFEEGLRRL--QE-GDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQEL--------------LAISALRRCLELK 128 (368)
T ss_dssp SHHHHHHHHH--HT-TCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHH--HC-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHH--------------HHHHHHHHHHhcC
Confidence 3566777777 66 99999999999999999999999999999999999875 9999999999999
Q ss_pred CCChHHHHHHHHHHHHhhchhhHHHHH---------------------------------------hcHHHHHHHHHHHH
Q psy9159 110 PNNSNTQKWYGICVGANGQFQSLKEKI---------------------------------------KCGVVFRDQMNKAI 150 (259)
Q Consensus 110 P~~~~~~~~la~~~~~~~~~~~~~~~~---------------------------------------~~~~~a~~~~~kAl 150 (259)
|+++.++..+|.++...|++..+...+ +....+...+++++
T Consensus 129 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 208 (368)
T 1fch_A 129 PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAV 208 (368)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHH
Confidence 999999999999999998876554322 22346778899999
Q ss_pred ccCCC--ChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC--------------CCCcHHHHHHHHHHHHhhCCCCcHHh
Q psy9159 151 QMAPK--DFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL--------------DEPTAEDAIANCLKAEELAPAPWKEN 214 (259)
Q Consensus 151 ~l~P~--~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~~~eAi~~~~kAi~l~P~~~~~~ 214 (259)
+++|+ ++.++..+|.++...++.+.....+..++...+ ..|++++|+.+|+++++++| +...+
T Consensus 209 ~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~ 287 (368)
T 1fch_A 209 RLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP-GYIRS 287 (368)
T ss_dssp HHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHH
T ss_pred HhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CcHHH
Confidence 99999 889999999999988776543333322211111 16999999999999999999 77899
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhcCCCCC
Q psy9159 215 QLLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 215 ~~~la~~~~~~g~~~eA~~~~~kal~l~p~~ 245 (259)
+..+|.+|..+|++++|++.|++++++.|.+
T Consensus 288 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 288 RYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999998877
No 17
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.87 E-value=8.7e-22 Score=151.63 Aligned_cols=140 Identities=10% Similarity=0.060 Sum_probs=127.0
Q ss_pred CcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy9159 43 KKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGIC 122 (259)
Q Consensus 43 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~ 122 (259)
..|++++|++.+++++..+|+++.+++.+|.+|...|++. +|++.++++++++|+++.+|..+|.+
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~--------------~A~~~~~~al~~~p~~~~a~~~lg~~ 74 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYD--------------LAKKYICTYINVQERDPKAHRFLGLL 74 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3489999999999999999999999999999999999875 99999999999999999999999999
Q ss_pred HHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHH-HH
Q psy9159 123 VGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIAN-CL 201 (259)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~-~~ 201 (259)
+...|++. .|...|+++++++|+++.+|+.+|.++... |++++|+.+ ++
T Consensus 75 ~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~la~~~~~~--------------------~~~~~aa~~~~~ 124 (150)
T 4ga2_A 75 YELEENTD----------KAVECYRRSVELNPTQKDLVLKIAELLCKN--------------------DVTDGRAKYWVE 124 (150)
T ss_dssp HHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH--------------------CSSSSHHHHHHH
T ss_pred HHHcCchH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------------CChHHHHHHHHH
Confidence 99999887 567899999999999999999999999876 677777765 58
Q ss_pred HHHhhCCCCcHHhHHHHHHHHHHhCC
Q psy9159 202 KAEELAPAPWKENQLLIAKCYIEAGE 227 (259)
Q Consensus 202 kAi~l~P~~~~~~~~~la~~~~~~g~ 227 (259)
+|++++| +++.++..++.++...|+
T Consensus 125 ~al~l~P-~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 125 RAAKLFP-GSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHST-TCHHHHHHHHHHHHTCCC
T ss_pred HHHHhCc-CCHHHHHHHHHHHHHhCc
Confidence 9999999 788999999999888775
No 18
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.86 E-value=2.1e-20 Score=152.52 Aligned_cols=192 Identities=15% Similarity=0.133 Sum_probs=114.3
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
+..+..++ .. |++++|+..++++++.+|+++.+++.+|.++...|++. +|+..++++++++|+
T Consensus 27 ~~~a~~~~--~~-~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~--------------~A~~~~~~~~~~~~~ 89 (243)
T 2q7f_A 27 GQQMGRGS--EF-GDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELE--------------RALAFYDKALELDSS 89 (243)
T ss_dssp ------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTT
T ss_pred HHHHHHHH--Hh-hCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHcCCc
Confidence 44444444 44 66666666666666666666666666666666666654 555566666666666
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcC----
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSD---- 187 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~---- 187 (259)
++.++..+|.++...|++. .+...++++++++|+++.++..+|.++...++.......+..++...
T Consensus 90 ~~~~~~~la~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 159 (243)
T 2q7f_A 90 AATAYYGAGNVYVVKEMYK----------EAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDT 159 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCH
T ss_pred chHHHHHHHHHHHHhccHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccH
Confidence 5555555555555555554 23444455555555555555555555444443322111111100000
Q ss_pred ----------CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhh
Q psy9159 188 ----------LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDL 251 (259)
Q Consensus 188 ----------~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~ 251 (259)
...|++++|+.+|+++++.+| ++..++..+|.++..+|++++|+++++++++++|+++.....
T Consensus 160 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~ 232 (243)
T 2q7f_A 160 EARFQFGMCLANEGMLDEALSQFAAVTEQDP-GHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHA 232 (243)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHH
Confidence 003889999999999999999 778899999999999999999999999999999888754433
No 19
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.86 E-value=8.4e-21 Score=172.38 Aligned_cols=185 Identities=15% Similarity=0.050 Sum_probs=152.2
Q ss_pred hhHHHHHhhcCCcCCH-HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC
Q psy9159 32 YPEIDRLLYYGKKDDK-AKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~-~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P 110 (259)
+..+..++ .. |++ ++|+..|+++++.+|+++++++.+|.+|...|++. +|+..++++++++|
T Consensus 106 ~~lg~~~~--~~-g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~--------------~A~~~~~~al~~~p 168 (474)
T 4abn_A 106 MLKGKALN--VT-PDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVT--------------SAHTCFSGALTHCK 168 (474)
T ss_dssp HHHHHHHT--SS-SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHTTCC
T ss_pred HHHHHHHH--hc-cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHhhCC
Confidence 44454555 55 999 99999999999999999999999999999999875 99999999999999
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCC
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDE 190 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (259)
+ +.++..+|.++..... .......+...+|...++++++++|+++.+|+.+|.++...- +......
T Consensus 169 ~-~~~~~~lg~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~------------~~~~~~~ 234 (474)
T 4abn_A 169 N-KVSLQNLSMVLRQLQT-DSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLY------------FNTGQNP 234 (474)
T ss_dssp C-HHHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH------------HHTTCCH
T ss_pred C-HHHHHHHHHHHHHhcc-CChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH------------Hhhcccc
Confidence 9 7999999999988710 001111122236789999999999999999999999987640 0000012
Q ss_pred CcHHHHHHHHHHHHhhCCC--CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 191 PTAEDAIANCLKAEELAPA--PWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~--~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|++++|+.+|++|++++|. +++.+|+++|.+|..+|++++|++.|+++++++|++++
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 293 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPE 293 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 6799999999999999992 25889999999999999999999999999999998875
No 20
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.86 E-value=2.8e-20 Score=146.60 Aligned_cols=141 Identities=18% Similarity=0.165 Sum_probs=130.7
Q ss_pred CCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHH
Q psy9159 62 PNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVV 141 (259)
Q Consensus 62 p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~ 141 (259)
.+++++|+++|.+|...|++. +|+..|+++++++|+++.++..+|.++...|++. .
T Consensus 2 ge~~~iy~~lG~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~----------~ 57 (184)
T 3vtx_A 2 GETTTIYMDIGDKKRTKGDFD--------------GAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPN----------D 57 (184)
T ss_dssp --CHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH----------H
T ss_pred CcHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHH----------H
Confidence 367899999999999999975 9999999999999999999999999999999887 4
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHH
Q psy9159 142 FRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKC 221 (259)
Q Consensus 142 a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~ 221 (259)
+...+++++..+|+++.++..+|.++... +++++|+..+.++++++| .+..++..+|.+
T Consensus 58 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~a~~~~~~a~~~~~-~~~~~~~~lg~~ 116 (184)
T 3vtx_A 58 AIESLKKFVVLDTTSAEAYYILGSANFMI--------------------DEKQAAIDALQRAIALNT-VYADAYYKLGLV 116 (184)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCc-cchHHHHHHHHH
Confidence 67889999999999999999999988774 789999999999999999 789999999999
Q ss_pred HHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 222 YIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 222 ~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|..+|++++|++.|+++++++|.+++
T Consensus 117 ~~~~g~~~~A~~~~~~~l~~~p~~~~ 142 (184)
T 3vtx_A 117 YDSMGEHDKAIEAYEKTISIKPGFIR 142 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHhCCchhHHHHHHHHHHhcchhhh
Confidence 99999999999999999999998764
No 21
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.86 E-value=4.6e-20 Score=156.84 Aligned_cols=191 Identities=15% Similarity=-0.002 Sum_probs=157.7
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL 108 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~ 108 (259)
+..+..+..++ .. |++++|+..++++++.+|.++.++..++.++...|++. +|+..++++++.
T Consensus 23 ~~~~~~a~~~~--~~-g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~~~~~ 85 (330)
T 3hym_B 23 DVVVSLAERHY--YN-CDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKAN--------------ELFYLSHKLVDL 85 (330)
T ss_dssp TTHHHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHH--------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--Hc-CCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHH--------------HHHHHHHHHHHh
Confidence 44567777777 67 99999999999999999999999999999999999875 999999999999
Q ss_pred CCCChHHHHHHHHHHHHhh-chhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcC
Q psy9159 109 APNNSNTQKWYGICVGANG-QFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSD 187 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~-~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~ 187 (259)
+|+++.++..+|.++...| ++. .+...++++++++|+++.+|..+|.++...++.......+..++...
T Consensus 86 ~~~~~~~~~~l~~~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 155 (330)
T 3hym_B 86 YPSNPVSWFAVGCYYLMVGHKNE----------HARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM 155 (330)
T ss_dssp CTTSTHHHHHHHHHHHHSCSCHH----------HHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred CcCCHHHHHHHHHHHHHhhhhHH----------HHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhc
Confidence 9999999999999999888 665 46788899999999999999999999988876543332222211111
Q ss_pred C--------------CCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 188 L--------------DEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 188 ~--------------~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
+ ..|++++|+.+|+++++++| ++..++..+|.++...|++++|++.+++++++.|...+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 228 (330)
T 3hym_B 156 KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAP-EDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGN 228 (330)
T ss_dssp TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSC
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccc
Confidence 1 15889999999999999999 67888899999999999999999999999888766443
No 22
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.86 E-value=5.1e-20 Score=148.10 Aligned_cols=167 Identities=14% Similarity=0.087 Sum_probs=137.3
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
...+..++ .. |++++|+..++++++.+|+++.++..+|.++...|++. +|+..++++++++|+
T Consensus 12 ~~~~~~~~--~~-~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------------~A~~~~~~a~~~~~~ 74 (225)
T 2vq2_A 12 TQLAMEYM--RG-QDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVND--------------KAQESFRQALSIKPD 74 (225)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTT
T ss_pred HHHHHHHH--HH-hhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChH--------------HHHHHHHHHHHhCCC
Confidence 44455566 56 99999999999999999999999999999999998875 999999999999999
Q ss_pred ChHHHHHHHHHHHHh-hchhhHHHHHhcHHHHHHHHHHHHc--cCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 112 NSNTQKWYGICVGAN-GQFQSLKEKIKCGVVFRDQMNKAIQ--MAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 112 ~~~~~~~la~~~~~~-~~~~~~~~~~~~~~~a~~~~~kAl~--l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
++.++..+|.++... |++. .+...++++++ .+|.++.+++.+|.++...
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------------ 126 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPA----------ESMAYFDKALADPTYPTPYIANLNKGICSAKQ------------------ 126 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHH----------HHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHT------------------
T ss_pred ChHHHHHHHHHHHHhcCcHH----------HHHHHHHHHHcCcCCcchHHHHHHHHHHHHHc------------------
Confidence 999999999999888 8876 45678888888 6677778888899888774
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCC-CCc
Q psy9159 189 DEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPV-VSY 246 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p-~~~ 246 (259)
|++++|+.+|+++++.+| .+..++..+|.++...|++++|++.+++++++.| .++
T Consensus 127 --~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 182 (225)
T 2vq2_A 127 --GQFGLAEAYLKRSLAAQP-QFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQA 182 (225)
T ss_dssp --TCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCH
T ss_pred --CCHHHHHHHHHHHHHhCC-CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCH
Confidence 667788888888887777 5677777778888888888888888888777776 544
No 23
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.86 E-value=7e-20 Score=149.82 Aligned_cols=200 Identities=15% Similarity=0.095 Sum_probs=149.9
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCH---HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDP---DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~---~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
.+..+..++ .. |++++|+..|+++++.+|+++ ++++.+|.+|...|++. +|+..++++++
T Consensus 7 ~~~~a~~~~--~~-g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~--------------~A~~~~~~~l~ 69 (225)
T 2yhc_A 7 IYATAQQKL--QD-GNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLP--------------LAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHH--HH-TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHH
T ss_pred HHHHHHHHH--Hc-CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHH--------------HHHHHHHHHHH
Confidence 456677777 56 999999999999999999874 79999999999999875 99999999999
Q ss_pred hCCCChH---HHHHHHHHHHHhhch--------hhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchH
Q psy9159 108 LAPNNSN---TQKWYGICVGANGQF--------QSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFF 176 (259)
Q Consensus 108 ~~P~~~~---~~~~la~~~~~~~~~--------~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~ 176 (259)
++|+++. +++++|.++...+.. .......+...+|...++++++.+|+++.++..+.++......+...
T Consensus 70 ~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~ 149 (225)
T 2yhc_A 70 LNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKY 149 (225)
T ss_dssp HCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred HCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHH
Confidence 9999986 788899888764311 00000112344788999999999999997764333221111111111
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcH---HhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhh
Q psy9159 177 ERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWK---ENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDL 251 (259)
Q Consensus 177 ~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~---~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~ 251 (259)
...++..++. .|++++|+..|+++++..| +++ .++..+|.+|..+|++++|++.++++....|.+.+.+-+
T Consensus 150 ~~~~a~~~~~---~~~~~~A~~~~~~~l~~~p-~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~~~~~~ 223 (225)
T 2yhc_A 150 EYSVAEYYTE---RGAWVAVVNRVEGMLRDYP-DTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTLEHHHH 223 (225)
T ss_dssp HHHHHHHHHH---HTCHHHHHHHHHHHHHHST-TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCCCCTTC
T ss_pred HHHHHHHHHH---cCcHHHHHHHHHHHHHHCc-CCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCchhhccc
Confidence 1111111111 3899999999999999999 554 679999999999999999999999999999998876543
No 24
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.86 E-value=2.6e-20 Score=161.77 Aligned_cols=200 Identities=13% Similarity=0.066 Sum_probs=143.3
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcc-----------c---------------
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRR-----------E--------------- 85 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~-----------~--------------- 85 (259)
...+..+. .. |++++|+..++++++.+|+++.++..+|.+|...|++.+. +
T Consensus 103 ~~lg~~~~--~~-g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 179 (365)
T 4eqf_A 103 QFLGITQA--EN-ENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGL 179 (365)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC----------
T ss_pred HHHHHHHH--HC-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHH
Confidence 34444555 56 9999999999999999999999999999999999987631 0
Q ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhH
Q psy9159 86 ----NDKEASEKYILQGIEYAKKAMELAPN--NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTL 159 (259)
Q Consensus 86 ----~~~~~~~~~~~~A~~~~~kal~~~P~--~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~ 159 (259)
+..-...+.+++|+..++++++++|+ ++.++..+|.++...|++. .|...++++++++|+++.+
T Consensus 180 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~----------~A~~~~~~al~~~p~~~~~ 249 (365)
T 4eqf_A 180 TRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFN----------RAIDAFNAALTVRPEDYSL 249 (365)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHH----------HHHHHHHHHHHhCCCCHHH
Confidence 00112356789999999999999999 8999999999999998887 4567788888888888888
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHhcCC--------------CCCcHHHHHHHHHHHHhhCCCCcHHh-----HHHHHH
Q psy9159 160 YSLKGRYQYEISKLSFFERKIAVLIVSDL--------------DEPTAEDAIANCLKAEELAPAPWKEN-----QLLIAK 220 (259)
Q Consensus 160 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~~~eAi~~~~kAi~l~P~~~~~~-----~~~la~ 220 (259)
|..+|.++...++.......+..++...| ..|++++|+.+|+++++++| ..... ....+.
T Consensus 250 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~~~ 328 (365)
T 4eqf_A 250 WNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQR-KSRNQQQVPHPAISGN 328 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH-CC------------CH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc-ccCCCcccchhhhHHH
Confidence 88888888777765433322222111111 14999999999999999999 43221 122356
Q ss_pred HHHHhCCHHHHHHHHHHHhcCCCCC
Q psy9159 221 CYIEAGEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 221 ~~~~~g~~~eA~~~~~kal~l~p~~ 245 (259)
++..+++.-....-.+.+......+
T Consensus 329 ~~~~l~~~~~~~g~~~~a~~~~~~~ 353 (365)
T 4eqf_A 329 IWAALRIALSLMDQPELFQAANLGD 353 (365)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHhh
Confidence 6766666666666555555554443
No 25
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.86 E-value=3.8e-21 Score=181.99 Aligned_cols=159 Identities=8% Similarity=-0.030 Sum_probs=149.4
Q ss_pred CCcCCHHHHHHHHHHHh--------hcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh
Q psy9159 42 GKKDDKAKAYNLTMELN--------NKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS 113 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~--------~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~ 113 (259)
.. |++++|++.+++++ +.+|+++++++.+|.++..+|++. +|+..++++++++|+++
T Consensus 403 ~~-~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~--------------~A~~~~~~al~~~p~~~ 467 (681)
T 2pzi_A 403 VL-SQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVA--------------KATRKLDDLAERVGWRW 467 (681)
T ss_dssp TT-CCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHHCCCH
T ss_pred cc-cCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHH--------------HHHHHHHHHhccCcchH
Confidence 45 99999999999999 999999999999999999999975 99999999999999999
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcH
Q psy9159 114 NTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTA 193 (259)
Q Consensus 114 ~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 193 (259)
.+|+.+|.++...|++. +|...|++|++++|+++.+|+.+|.++... |++
T Consensus 468 ~a~~~lg~~~~~~g~~~----------~A~~~~~~al~l~P~~~~~~~~lg~~~~~~--------------------g~~ 517 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYD----------SATKHFTEVLDTFPGELAPKLALAATAELA--------------------GNT 517 (681)
T ss_dssp HHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHSTTCSHHHHHHHHHHHHH--------------------TCC
T ss_pred HHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCChHHHHHHHHHHHHc--------------------CCh
Confidence 99999999999999987 578999999999999999999999999886 778
Q ss_pred HHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 194 EDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 194 ~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
++ +.+|++|++++| ++..+++++|.++..+|++++|++.|+++++++|++.+
T Consensus 518 ~~-~~~~~~al~~~P-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~ 569 (681)
T 2pzi_A 518 DE-HKFYQTVWSTND-GVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTT 569 (681)
T ss_dssp CT-TCHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHH
T ss_pred HH-HHHHHHHHHhCC-chHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHH
Confidence 99 999999999999 78999999999999999999999999999999988764
No 26
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.86 E-value=1.6e-19 Score=154.86 Aligned_cols=189 Identities=11% Similarity=0.037 Sum_probs=152.4
Q ss_pred HHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChH
Q psy9159 35 IDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN 114 (259)
Q Consensus 35 ~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~ 114 (259)
+..+. .. |++++|+..++++++.+|+++.++..+|.++...|++. +|+..++++++++|+++.
T Consensus 127 a~~~~--~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~~~~~~~~~~~ 189 (359)
T 3ieg_A 127 ALDAF--DG-ADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPR--------------KAISDLKAASKLKSDNTE 189 (359)
T ss_dssp HHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHTTCSCCHH
T ss_pred HHHHH--Hc-cCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHHhCCCCHH
Confidence 44555 56 99999999999999999999999999999999999875 999999999999999999
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHH------------HHHHHHhhccchHHHHHHH
Q psy9159 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLK------------GRYQYEISKLSFFERKIAV 182 (259)
Q Consensus 115 ~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~l------------G~~~~~~~~~~~~~~~~~~ 182 (259)
++..+|.++...|++. .+...++++++++|+++.++..+ |.++...++.+.....+..
T Consensus 190 ~~~~la~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 259 (359)
T 3ieg_A 190 AFYKISTLYYQLGDHE----------LSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYES 259 (359)
T ss_dssp HHHHHHHHHHHHTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHH----------HHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999998877 45677778888888877765533 5556555554322211111
Q ss_pred HHhc------------------CCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 183 LIVS------------------DLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 183 ~~~~------------------~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
++-. ....|++++|+.+|+++++++| +++.++..+|.++...|++++|++.|+++++++|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~ 338 (359)
T 3ieg_A 260 VMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEP-DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNEN 338 (359)
T ss_dssp HHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 0000 0115999999999999999999 77999999999999999999999999999999998
Q ss_pred Cccchhh
Q psy9159 245 SYESHDL 251 (259)
Q Consensus 245 ~~~~~~~ 251 (259)
+.+-...
T Consensus 339 ~~~~~~~ 345 (359)
T 3ieg_A 339 DQQIREG 345 (359)
T ss_dssp CHHHHHH
T ss_pred ChHHHHH
Confidence 8764443
No 27
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.1e-20 Score=152.49 Aligned_cols=193 Identities=18% Similarity=0.115 Sum_probs=154.2
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P 110 (259)
....+..++ .. |++++|+..++++++.+ +++.+++.+|.++..+|++. +|+..++++++++|
T Consensus 8 ~~~~g~~~~--~~-~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~a~~~~~ 69 (258)
T 3uq3_A 8 EKAEGNKFY--KA-RQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYE--------------TAISTLNDAVEQGR 69 (258)
T ss_dssp HHHHHHHHH--HT-TCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--Hh-ccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHH--------------HHHHHHHHHHHhCc
Confidence 455666777 66 99999999999999999 99999999999999999875 99999999999999
Q ss_pred CC-------hHHHHHHHHHHHHhhchhhHHHHHhc----------------HHHHHHHHHHHHccCCCChhHHHHHHHHH
Q psy9159 111 NN-------SNTQKWYGICVGANGQFQSLKEKIKC----------------GVVFRDQMNKAIQMAPKDFTLYSLKGRYQ 167 (259)
Q Consensus 111 ~~-------~~~~~~la~~~~~~~~~~~~~~~~~~----------------~~~a~~~~~kAl~l~P~~~~~~~~lG~~~ 167 (259)
++ +.++..+|.++...|++..+...... ...+...+++++..+|+++.++..+|.++
T Consensus 70 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (258)
T 3uq3_A 70 EMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEY 149 (258)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHH
Confidence 88 78999999999999988765443222 22455667777778888888888888888
Q ss_pred HHhhccchHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHH
Q psy9159 168 YEISKLSFFERKIAVLIVSD--------------LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQ 233 (259)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~ 233 (259)
...++.+.....+..++-.. ...|++++|+.+|+++++++| +++.++..+|.++..+|++++|++
T Consensus 150 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~l~~~~~~~g~~~~A~~ 228 (258)
T 3uq3_A 150 FTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP-NFVRAYIRKATAQIAVKEYASALE 228 (258)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhHHHHHH
Confidence 88766543322222111111 115889999999999999999 678889999999999999999999
Q ss_pred HHHHHhcCC
Q psy9159 234 WLDKAKAIP 242 (259)
Q Consensus 234 ~~~kal~l~ 242 (259)
.++++++++
T Consensus 229 ~~~~a~~~~ 237 (258)
T 3uq3_A 229 TLDAARTKD 237 (258)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 999999988
No 28
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.85 E-value=9e-21 Score=149.23 Aligned_cols=164 Identities=10% Similarity=0.032 Sum_probs=140.9
Q ss_pred cCCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 28 NNSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
.+..+..+..++ .. |++++|+..++++++.+|+++++++.+|.++...|++. +|+..++++++
T Consensus 6 ~~~~~~~a~~~~--~~-g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~--------------~A~~~~~~a~~ 68 (176)
T 2r5s_A 6 DEQLLKQVSELL--QQ-GEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFE--------------LAQELLATIPL 68 (176)
T ss_dssp CTTHHHHHHHHH--HT-TCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHH--------------HHHHHHTTCCG
T ss_pred HHHHHHHHHHHH--Hc-CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHH--------------HHHHHHHHhhh
Confidence 345678888888 67 99999999999999999999999999999999999875 99999999999
Q ss_pred hCCCChHHHHHHHHHHH-HhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhc
Q psy9159 108 LAPNNSNTQKWYGICVG-ANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVS 186 (259)
Q Consensus 108 ~~P~~~~~~~~la~~~~-~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~ 186 (259)
++| ++..+...+.+.. ..+... .+...++++++++|+++.+++.+|.++...
T Consensus 69 ~~p-~~~~~~~~~~~~~~~~~~~~----------~a~~~~~~al~~~P~~~~~~~~la~~~~~~---------------- 121 (176)
T 2r5s_A 69 EYQ-DNSYKSLIAKLELHQQAAES----------PELKRLEQELAANPDNFELACELAVQYNQV---------------- 121 (176)
T ss_dssp GGC-CHHHHHHHHHHHHHHHHTSC----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHT----------------
T ss_pred ccC-ChHHHHHHHHHHHHhhcccc----------hHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----------------
Confidence 999 8876655554322 111111 246889999999999999999999999875
Q ss_pred CCCCCcHHHHHHHHHHHHhhCCCCc--HHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 187 DLDEPTAEDAIANCLKAEELAPAPW--KENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 187 ~~~~g~~~eAi~~~~kAi~l~P~~~--~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
|++++|+.+|+++++++| ++ ..++..+|.++..+|+.++|+..|++++.
T Consensus 122 ----g~~~~A~~~~~~~l~~~p-~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 122 ----GRDEEALELLWNILKVNL-GAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp ----TCHHHHHHHHHHHHTTCT-TTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHHHHhCc-ccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 889999999999999999 54 45899999999999999999999999975
No 29
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.85 E-value=1.9e-20 Score=152.85 Aligned_cols=159 Identities=11% Similarity=0.026 Sum_probs=115.4
Q ss_pred CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHH
Q psy9159 64 DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFR 143 (259)
Q Consensus 64 ~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~ 143 (259)
.+..++.+|.++...|++. +|+..++++++.+|+++.++..+|.++...|++. .+.
T Consensus 22 ~~~~~~~~a~~~~~~~~~~--------------~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~----------~A~ 77 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYE--------------KAAEAFTKAIEENKEDAIPYINFANLLSSVNELE----------RAL 77 (243)
T ss_dssp ----------------------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHH----------HHH
T ss_pred HHHHHHHHHHHHHHhhCHH--------------HHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHH----------HHH
Confidence 4678889999999999875 9999999999999999999999999999999887 567
Q ss_pred HHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHHHhhCCC
Q psy9159 144 DQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSD--------------LDEPTAEDAIANCLKAEELAPA 209 (259)
Q Consensus 144 ~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~eAi~~~~kAi~l~P~ 209 (259)
..++++++++|+++.++..+|.++...++.....+.+..++... ...|++++|+.+++++++++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~- 156 (243)
T 2q7f_A 78 AFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE- 156 (243)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT-
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-
Confidence 89999999999999999999999998877543332222211111 125889999999999999999
Q ss_pred CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 210 PWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 210 ~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
++..++..+|.++...|++++|++.++++++.+|.+++
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 194 (243)
T 2q7f_A 157 NDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHAD 194 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHH
Confidence 67888899999999999999999999999998876653
No 30
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.85 E-value=1.8e-20 Score=155.85 Aligned_cols=186 Identities=17% Similarity=0.160 Sum_probs=113.2
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL 108 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~ 108 (259)
+..+..+..++ .. |++++|+..++++++.+|+++.+++.+|.+|...|++. +|+..++++++
T Consensus 4 ~~~~~~a~~~~--~~-~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~--------------~A~~~~~~a~~- 65 (272)
T 3u4t_A 4 DVEFRYADFLF--KN-NNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYD--------------LAQKDIETYFS- 65 (272)
T ss_dssp -CHHHHHHHHH--TT-TCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHH--------------HHHHHHHHHHT-
T ss_pred HHHHHHHHHHH--Hh-cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHH--------------HHHHHHHHHHh-
Confidence 34567777777 66 89999999999999999999989999999998888865 55555555555
Q ss_pred CCCChHH----HHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHH----
Q psy9159 109 APNNSNT----QKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKI---- 180 (259)
Q Consensus 109 ~P~~~~~----~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~---- 180 (259)
.|+++.. +..+|.++...|++. .|...++++++++|+++.++..+|.++...+++......+
T Consensus 66 ~~~~~~~~~~~~~~lg~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 135 (272)
T 3u4t_A 66 KVNATKAKSADFEYYGKILMKKGQDS----------LAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQI 135 (272)
T ss_dssp TSCTTTCCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGC
T ss_pred ccCchhHHHHHHHHHHHHHHHcccHH----------HHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 3333332 455555555555544 3445555555555555555555555555442211100000
Q ss_pred -------------HHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCC---HHHHHHHHHHHhcCCCC
Q psy9159 181 -------------AVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGE---YAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 181 -------------~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~---~~eA~~~~~kal~l~p~ 244 (259)
+...+. .+++++|+.+|+++++++| ++..++..+|.++..+|+ +++|+..+++++++...
T Consensus 136 ~~~~~~~~~~~~l~~~~~~---~~~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 211 (272)
T 3u4t_A 136 RPTTTDPKVFYELGQAYYY---NKEYVKADSSFVKVLELKP-NIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAP 211 (272)
T ss_dssp CSSCCCHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGG
T ss_pred hcCCCcHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhCc-cchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhc
Confidence 000000 1466777777777777777 556666777777777776 66677777777766543
Q ss_pred Cc
Q psy9159 245 SY 246 (259)
Q Consensus 245 ~~ 246 (259)
.+
T Consensus 212 ~~ 213 (272)
T 3u4t_A 212 GG 213 (272)
T ss_dssp GG
T ss_pred cc
Confidence 33
No 31
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.85 E-value=3.3e-19 Score=151.29 Aligned_cols=200 Identities=14% Similarity=0.071 Sum_probs=166.2
Q ss_pred cCCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 28 NNSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
.+..+..+..++ .. |++++|+..++++++.+|+++.++..+|.++...|++. +|+..++++++
T Consensus 21 ~~~~~~~a~~~~--~~-~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------------~A~~~~~~a~~ 83 (327)
T 3cv0_A 21 HENPMEEGLSML--KL-ANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDG--------------LAIIALNHARM 83 (327)
T ss_dssp SSCHHHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHH
T ss_pred hHHHHHHHHHHH--Hh-ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHh
Confidence 345677888887 67 99999999999999999999999999999999999875 99999999999
Q ss_pred hCCCChHHHHHHHHHHHHhhchhhHHHHH---------------------------------------hcHHHHHHHHHH
Q psy9159 108 LAPNNSNTQKWYGICVGANGQFQSLKEKI---------------------------------------KCGVVFRDQMNK 148 (259)
Q Consensus 108 ~~P~~~~~~~~la~~~~~~~~~~~~~~~~---------------------------------------~~~~~a~~~~~k 148 (259)
++|+++.++..+|.++...|++..+.... +....+...+++
T Consensus 84 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 163 (327)
T 3cv0_A 84 LDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHA 163 (327)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHH
T ss_pred cCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHH
Confidence 99999999999999999988876554321 112456788999
Q ss_pred HHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC--------------CCCcHHHHHHHHHHHHhhCCCCcHHh
Q psy9159 149 AIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL--------------DEPTAEDAIANCLKAEELAPAPWKEN 214 (259)
Q Consensus 149 Al~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~~~eAi~~~~kAi~l~P~~~~~~ 214 (259)
+++++|+++.++..+|.++...++.+...+.+..++...+ ..|++++|+.+|+++++++| ++..+
T Consensus 164 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~ 242 (327)
T 3cv0_A 164 ALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINP-GYVRV 242 (327)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHH
T ss_pred HHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-CCHHH
Confidence 9999999999999999999888776443333222111111 15899999999999999999 77889
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhcCCCCC
Q psy9159 215 QLLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 215 ~~~la~~~~~~g~~~eA~~~~~kal~l~p~~ 245 (259)
+..+|.++..+|++++|++.+++++++.|.+
T Consensus 243 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 273 (327)
T 3cv0_A 243 MYNMAVSYSNMSQYDLAAKQLVRAIYMQVGG 273 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999884
No 32
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.85 E-value=1.1e-19 Score=155.92 Aligned_cols=190 Identities=14% Similarity=0.105 Sum_probs=152.9
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P 110 (259)
.+..+..++ .. |++++|+..++++++.+|+++.+++.+|.++...|++. +|+..++++++++|
T Consensus 6 ~~~~~~~~~--~~-g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~--------------~A~~~~~~~~~~~~ 68 (359)
T 3ieg_A 6 HLELGKKLL--AA-GQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSK--------------AALPDLTKVIALKM 68 (359)
T ss_dssp HHHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHCT
T ss_pred HHHHHHHHH--Hc-CCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHH--------------HHHHHHHHHHHhCC
Confidence 456677777 67 99999999999999999999999999999999999875 99999999999999
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCC---CChhHHHHHH------------HHHHHhhccch
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAP---KDFTLYSLKG------------RYQYEISKLSF 175 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P---~~~~~~~~lG------------~~~~~~~~~~~ 175 (259)
+++.++..+|.++...|++. .+...++++++++| +++.++..+| .++...++...
T Consensus 69 ~~~~~~~~l~~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 138 (359)
T 3ieg_A 69 DFTAARLQRGHLLLKQGKLD----------EAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTA 138 (359)
T ss_dssp TCHHHHHHHHHHHHHHTCHH----------HHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcchHHHHHHHHHHHcCChH----------HHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHH
Confidence 99999999999999999887 56789999999999 9999998884 55555555432
Q ss_pred HHHHHHHHHhcC--------------CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 176 FERKIAVLIVSD--------------LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 176 ~~~~~~~~~~~~--------------~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
....+..++-.. ...|++++|+.+++++++++| .++.++..+|.++...|++++|++.+++++++
T Consensus 139 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 217 (359)
T 3ieg_A 139 AITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKS-DNTEAFYKISTLYYQLGDHELSLSEVRECLKL 217 (359)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCS-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 222221111111 115788888888888888888 66778888888888888888888888888888
Q ss_pred CCCCccc
Q psy9159 242 PVVSYES 248 (259)
Q Consensus 242 ~p~~~~~ 248 (259)
+|.+...
T Consensus 218 ~~~~~~~ 224 (359)
T 3ieg_A 218 DQDHKRC 224 (359)
T ss_dssp CTTCHHH
T ss_pred CccchHH
Confidence 8776653
No 33
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.85 E-value=1.6e-19 Score=148.57 Aligned_cols=192 Identities=14% Similarity=0.021 Sum_probs=142.7
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
...+..++ .. |++++|+..++++++.+|+++.+++.+|.++...|++. +|+..++++++.+|+
T Consensus 41 ~~~a~~~~--~~-~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~--------------~A~~~~~~a~~~~~~ 103 (252)
T 2ho1_A 41 IQLGLGYL--QR-GNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPK--------------LADEEYRKALASDSR 103 (252)
T ss_dssp HHHHHHHH--HT-TCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTT
T ss_pred HHHHHHHH--Hc-CChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHHCcC
Confidence 34444454 45 89999999999999999999999999999999888865 888888888888888
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHc--cCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcC--
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQ--MAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSD-- 187 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~--l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~-- 187 (259)
++.++..+|.++...|++. ++...++++++ .+|.++.++..+|.++...++.+.....+..++...
T Consensus 104 ~~~~~~~la~~~~~~g~~~----------~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 104 NARVLNNYGGFLYEQKRYE----------EAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHH----------HHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred cHHHHHHHHHHHHHHhHHH----------HHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 8888888888888888776 45667777777 777777777777777776655432222111111000
Q ss_pred ------------CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhh
Q psy9159 188 ------------LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDL 251 (259)
Q Consensus 188 ------------~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~ 251 (259)
...|++++|+.+++++++.+| +....+..++.++...|++++|.+.+++++++.|++++-...
T Consensus 174 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 248 (252)
T 2ho1_A 174 QPSVALEMADLLYKEREYVPARQYYDLFAQGGG-QNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEF 248 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSC-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 014788888888888888888 667778888888888888888888888888888777765443
No 34
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.84 E-value=1.3e-21 Score=150.69 Aligned_cols=126 Identities=12% Similarity=0.071 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhcc
Q psy9159 94 YILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKL 173 (259)
Q Consensus 94 ~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~ 173 (259)
.+++|++.+++++..+|+++.+++.+|.++...|++. .|++.++++|+++|+++.+|+.+|.++...
T Consensus 12 ~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~----------~A~~~~~~al~~~p~~~~a~~~lg~~~~~~--- 78 (150)
T 4ga2_A 12 DVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYD----------LAKKYICTYINVQERDPKAHRFLGLLYELE--- 78 (150)
T ss_dssp HHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT---
T ss_pred hHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHc---
Confidence 3469999999999999999999999999999999987 578999999999999999999999999875
Q ss_pred chHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHH-HHHHhcCCCCCccchh
Q psy9159 174 SFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQW-LDKAKAIPVVSYESHD 250 (259)
Q Consensus 174 ~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~-~~kal~l~p~~~~~~~ 250 (259)
|++++|+.+|+++++++| +++.+++.+|.+|..+|++++|.+. +++|++++|++++--.
T Consensus 79 -----------------~~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~ 138 (150)
T 4ga2_A 79 -----------------ENTDKAVECYRRSVELNP-TQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYK 138 (150)
T ss_dssp -----------------TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHH
T ss_pred -----------------CchHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHH
Confidence 889999999999999999 7899999999999999999887765 6999999999886433
No 35
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=3.2e-20 Score=138.79 Aligned_cols=122 Identities=16% Similarity=0.113 Sum_probs=111.8
Q ss_pred HHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHH
Q psy9159 56 ELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEK 135 (259)
Q Consensus 56 ~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~ 135 (259)
++..++|+.++++..+|.+|+..|++. +|++.|+++++++|+++.+|.++|.++..+|++.
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~----- 64 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYP--------------TAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQ----- 64 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-----
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHH-----
Confidence 345689999999999999999999976 9999999999999999999999999999999987
Q ss_pred HhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhH
Q psy9159 136 IKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQ 215 (259)
Q Consensus 136 ~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~ 215 (259)
.|+..++++|+++|+++.+|+.+|.++..+ |++++|+.+|+++++++| ++..++
T Consensus 65 -----~A~~~~~~al~~~p~~~~a~~~lg~~~~~~--------------------~~~~~A~~~~~~al~l~P-~~~~a~ 118 (126)
T 4gco_A 65 -----RALDDCDTCIRLDSKFIKGYIRKAACLVAM--------------------REWSKAQRAYEDALQVDP-SNEEAR 118 (126)
T ss_dssp -----HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCT-TCHHHH
T ss_pred -----HHHHHHHHHHHhhhhhhHHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHHHCc-CCHHHH
Confidence 567899999999999999999999999885 889999999999999999 789999
Q ss_pred HHHHHHH
Q psy9159 216 LLIAKCY 222 (259)
Q Consensus 216 ~~la~~~ 222 (259)
..|+.|+
T Consensus 119 ~~l~~~l 125 (126)
T 4gco_A 119 EGVRNCL 125 (126)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9998875
No 36
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.84 E-value=3.4e-21 Score=148.87 Aligned_cols=126 Identities=7% Similarity=-0.122 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH
Q psy9159 90 ASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE 169 (259)
Q Consensus 90 ~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~ 169 (259)
+++..+..+-..++++++++|+++.+++.+|.++...|++. +|...|+++++++|+++.+|+.+|.++..
T Consensus 13 ~~l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~----------eA~~~~~~al~~~P~~~~~~~~lg~~~~~ 82 (151)
T 3gyz_A 13 TAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIE----------EAEVFFRFLCIYDFYNVDYIMGLAAIYQI 82 (151)
T ss_dssp HHHHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 44445556667789999999999999999999999999987 57799999999999999999999999987
Q ss_pred hhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 170 ISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
. |++++|+.+|++|++++| +++.+|+++|.+|..+|++++|++.|++++++.|+++
T Consensus 83 ~--------------------g~~~~Ai~~~~~al~l~P-~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 83 K--------------------EQFQQAADLYAVAFALGK-NDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp T--------------------TCHHHHHHHHHHHHHHSS-SCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred H--------------------ccHHHHHHHHHHHHhhCC-CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 5 889999999999999999 7899999999999999999999999999999998765
No 37
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.83 E-value=1.2e-19 Score=167.72 Aligned_cols=158 Identities=16% Similarity=0.063 Sum_probs=132.4
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
|++++|+..++++++.+|+++++++.+|.++...|++. +|++.++++++++|+++.++..+|.++.
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~lg~~~~ 68 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTT--------------AGEMAVQRGLALHPGHPEAVARLGRVRW 68 (568)
T ss_dssp ------------------CCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHTTSTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999875 9999999999999999999999999999
Q ss_pred HhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHH
Q psy9159 125 ANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAE 204 (259)
Q Consensus 125 ~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi 204 (259)
..|++. +|...++++++++|+++.+++.+|.++... |++++|+++|++++
T Consensus 69 ~~g~~~----------~A~~~~~~al~~~p~~~~~~~~la~~~~~~--------------------g~~~~A~~~~~~al 118 (568)
T 2vsy_A 69 TQQRHA----------EAAVLLQQASDAAPEHPGIALWLGHALEDA--------------------GQAEAAAAAYTRAH 118 (568)
T ss_dssp HTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHH
T ss_pred HCCCHH----------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHH
Confidence 999887 567899999999999999999999999875 88999999999999
Q ss_pred hhCCCCcHHhHHHHHHHHHHh---CCHHHHHHHHHHHhcCCCCCcc
Q psy9159 205 ELAPAPWKENQLLIAKCYIEA---GEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 205 ~l~P~~~~~~~~~la~~~~~~---g~~~eA~~~~~kal~l~p~~~~ 247 (259)
+++| ++..++..+|.++..+ |++++|++.++++++.+|.+.+
T Consensus 119 ~~~p-~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 119 QLLP-EEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp HHCT-TCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred HhCC-CCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccC
Confidence 9999 7799999999999999 9999999999999999998753
No 38
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.83 E-value=5.5e-19 Score=157.16 Aligned_cols=190 Identities=12% Similarity=0.047 Sum_probs=156.1
Q ss_pred HHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChH
Q psy9159 35 IDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN 114 (259)
Q Consensus 35 ~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~ 114 (259)
+..++ .. |++++|+..++++++.+|.++.++..+|.+|...|++. +|+..++++++.+|+++.
T Consensus 150 a~~~~--~~-~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~~~~~~~~~~~ 212 (450)
T 2y4t_A 150 ALNAF--GS-GDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPR--------------KAISDLKAASKLKNDNTE 212 (450)
T ss_dssp HHHHH--HH-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGG--------------GGHHHHHHHHHHHCSCHH
T ss_pred HHHHH--Hc-CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHHhCCCCHH
Confidence 33455 45 99999999999999999999999999999999999986 999999999999999999
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHH------------HHHHHHhhccchHHHHHHH
Q psy9159 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLK------------GRYQYEISKLSFFERKIAV 182 (259)
Q Consensus 115 ~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~l------------G~~~~~~~~~~~~~~~~~~ 182 (259)
++..+|.++...|++. .+...++++++++|++..++..+ |.++...++.......+..
T Consensus 213 ~~~~l~~~~~~~g~~~----------~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 282 (450)
T 2y4t_A 213 AFYKISTLYYQLGDHE----------LSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYES 282 (450)
T ss_dssp HHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999998877 45678888888888888877666 7777766654322221111
Q ss_pred HHhc------------------CCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 183 LIVS------------------DLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 183 ~~~~------------------~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
++-. ....|++++|+.+++++++++| ++..++..+|.++...|++++|++.++++++++|+
T Consensus 283 ~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 361 (450)
T 2y4t_A 283 VMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP-DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEN 361 (450)
T ss_dssp HHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS
T ss_pred HHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc
Confidence 1000 0125999999999999999999 78999999999999999999999999999999999
Q ss_pred Cccchhhh
Q psy9159 245 SYESHDLS 252 (259)
Q Consensus 245 ~~~~~~~~ 252 (259)
+++....+
T Consensus 362 ~~~~~~~l 369 (450)
T 2y4t_A 362 DQQIREGL 369 (450)
T ss_dssp CHHHHHHH
T ss_pred hHHHHHHH
Confidence 87654433
No 39
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.83 E-value=4e-20 Score=153.74 Aligned_cols=194 Identities=13% Similarity=-0.008 Sum_probs=126.7
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHH----HHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPD----VLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~----~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
...+..++ .. |++++|+..++++++ .|.+++ ++..+|.++...|++. +|+..++++++
T Consensus 41 ~~l~~~~~--~~-~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~--------------~A~~~~~~a~~ 102 (272)
T 3u4t_A 41 NRRAVCYY--EL-AKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDS--------------LAIQQYQAAVD 102 (272)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHH
T ss_pred HHHHHHHH--HH-hhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHH--------------HHHHHHHHHHh
Confidence 44444444 45 777777777777777 444433 3777777777777654 77777777777
Q ss_pred hCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHH-HHHHHhhccchHHHHHHH----
Q psy9159 108 LAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKG-RYQYEISKLSFFERKIAV---- 182 (259)
Q Consensus 108 ~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG-~~~~~~~~~~~~~~~~~~---- 182 (259)
++|+++.++..+|.++...|++. .|...++++++++|+++.+++.+| .++. .+++....+.+..
T Consensus 103 ~~~~~~~~~~~l~~~~~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~ 171 (272)
T 3u4t_A 103 RDTTRLDMYGQIGSYFYNKGNFP----------LAIQYMEKQIRPTTTDPKVFYELGQAYYY-NKEYVKADSSFVKVLEL 171 (272)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHH----------HHHHHHGGGCCSSCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHccCHH----------HHHHHHHHHhhcCCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence 77777777777777777777665 344555555555555555555555 3322 2222111111000
Q ss_pred -------------HHhcCCCCCcHHHHHHHHHHHHhhC---CCC-----cHHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 183 -------------LIVSDLDEPTAEDAIANCLKAEELA---PAP-----WKENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 183 -------------~~~~~~~~g~~~eAi~~~~kAi~l~---P~~-----~~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
.+........+++|+.+|++++++. | + ...++..+|.+|...|++++|++++++++++
T Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 250 (272)
T 3u4t_A 172 KPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGG-AKYKDELIEANEYIAYYYTINRDKVKADAAWKNILAL 250 (272)
T ss_dssp STTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGG-GGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 0000001133889999999999986 5 3 2367899999999999999999999999999
Q ss_pred CCCCccchhhhhhh
Q psy9159 242 PVVSYESHDLSTTY 255 (259)
Q Consensus 242 ~p~~~~~~~~~~~~ 255 (259)
+|+++..++.+...
T Consensus 251 ~p~~~~a~~~l~~~ 264 (272)
T 3u4t_A 251 DPTNKKAIDGLKMK 264 (272)
T ss_dssp CTTCHHHHHHHC--
T ss_pred CccHHHHHHHhhhh
Confidence 99999877766543
No 40
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.83 E-value=1.7e-19 Score=163.73 Aligned_cols=183 Identities=15% Similarity=0.141 Sum_probs=155.0
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGI 121 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~ 121 (259)
.. |++++|+..++++++.+|+++.++..+|.++...|++. +|+..++++++++|+++.++..+|.
T Consensus 288 ~~-~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------------~A~~~~~~a~~~~~~~~~~~~~la~ 352 (537)
T 3fp2_A 288 DK-ENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYK--------------NAKEDFQKAQSLNPENVYPYIQLAC 352 (537)
T ss_dssp CS-SCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCSHHHHHHHH
T ss_pred Hh-cCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHH--------------HHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45 89999999999999999999999999999999988875 9999999999999999999999999
Q ss_pred HHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhc---CC----C-----
Q psy9159 122 CVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVS---DL----D----- 189 (259)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~---~~----~----- 189 (259)
++...|++. .+...++++++++|+++.++..+|.++...++.......+..++-. .. .
T Consensus 353 ~~~~~g~~~----------~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 422 (537)
T 3fp2_A 353 LLYKQGKFT----------ESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLI 422 (537)
T ss_dssp HHHHTTCHH----------HHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHH
T ss_pred HHHHcCCHH----------HHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHH
Confidence 999998887 5678999999999999999999999999988765433322221110 00 0
Q ss_pred --------C----------CcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchh
Q psy9159 190 --------E----------PTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHD 250 (259)
Q Consensus 190 --------~----------g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~ 250 (259)
. |++++|+.+|+++++++| ++..++..+|.+|..+|++++|+++|+++++++|.+++...
T Consensus 423 ~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 500 (537)
T 3fp2_A 423 GKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDP-RSEQAKIGLAQLKLQMEKIDEAIELFEDSAILARTMDEKLQ 500 (537)
T ss_dssp HHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CHHHHH
T ss_pred HHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHH
Confidence 1 899999999999999999 78999999999999999999999999999999998876543
No 41
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.83 E-value=2e-19 Score=146.62 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=129.4
Q ss_pred CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHhhchhhHHHHHhcH
Q psy9159 61 QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP-NNSNTQKWYGICVGANGQFQSLKEKIKCG 139 (259)
Q Consensus 61 ~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P-~~~~~~~~la~~~~~~~~~~~~~~~~~~~ 139 (259)
.|.+|++++.+|.++...|++. +|+..++++++++| .++.+++++|.++...|++.
T Consensus 3 ~~~~~~~~~~~g~~~~~~~~~~--------------~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~--------- 59 (228)
T 4i17_A 3 QTTDPNQLKNEGNDALNAKNYA--------------VAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYK--------- 59 (228)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHH---------
T ss_pred cccCHHHHHHHHHHHHHccCHH--------------HHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHH---------
Confidence 4678899999999999999875 99999999999999 99999999999999999887
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcH-------
Q psy9159 140 VVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWK------- 212 (259)
Q Consensus 140 ~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~------- 212 (259)
.|...++++++++|+++.+|+.+|.++... |++++|+.+|+++++++| ++.
T Consensus 60 -~A~~~~~~al~~~p~~~~~~~~l~~~~~~~--------------------~~~~~A~~~~~~al~~~p-~~~~~~~~~~ 117 (228)
T 4i17_A 60 -EAADYFDIAIKKNYNLANAYIGKSAAYRDM--------------------KNNQEYIATLTEGIKAVP-GNATIEKLYA 117 (228)
T ss_dssp -HHHHHHHHHHHTTCSHHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHST-TCHHHHHHHH
T ss_pred -HHHHHHHHHHHhCcchHHHHHHHHHHHHHc--------------------ccHHHHHHHHHHHHHHCC-CcHHHHHHHH
Confidence 567899999999999999999999999875 889999999999999999 667
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 213 ENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 213 ~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
.++..+|.++..+|++++|++.|+++++++|+
T Consensus 118 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 118 IYYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 66999999999999999999999999999987
No 42
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.83 E-value=3.1e-20 Score=138.83 Aligned_cols=117 Identities=17% Similarity=0.247 Sum_probs=106.6
Q ss_pred HHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHH
Q psy9159 104 KAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVL 183 (259)
Q Consensus 104 kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~ 183 (259)
+...+||+.++++...|..+...|++. .|++.|+++|+++|+++.+|+.+|.++..+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~----------~A~~~~~~al~~~p~~~~~~~~~~~~~~~~------------- 60 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYP----------TAMRHYNEAVKRDPENAILYSNRAACLTKL------------- 60 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-------------
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHHHhhHHHhh-------------
Confidence 455799999999999999999999988 577999999999999999999999999885
Q ss_pred HhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhh
Q psy9159 184 IVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDL 251 (259)
Q Consensus 184 ~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~ 251 (259)
|++++|+.+|++|++++| +++.+|+.+|.+|..+|++++|++.|+++++++|++.+-...
T Consensus 61 -------~~~~~A~~~~~~al~~~p-~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~ 120 (126)
T 4gco_A 61 -------MEFQRALDDCDTCIRLDS-KFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREG 120 (126)
T ss_dssp -------TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred -------ccHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHH
Confidence 889999999999999999 789999999999999999999999999999999988865443
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.83 E-value=3.6e-19 Score=158.31 Aligned_cols=192 Identities=14% Similarity=0.104 Sum_probs=150.2
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL 108 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~ 108 (259)
...+..+..++ .. |++++|+..|+++++.+|+++.+++.+|.+|...|++. +|+..+++++++
T Consensus 27 ~~~~~~~~~~~--~~-g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al~~ 89 (450)
T 2y4t_A 27 EKHLELGKKLL--AA-GQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSK--------------AALPDLTKVIQL 89 (450)
T ss_dssp HHHHHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HC-CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHhc
Confidence 34456676777 56 99999999999999999999999999999999999875 999999999999
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh---hHHHHHH------------HHHHHhhcc
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF---TLYSLKG------------RYQYEISKL 173 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~---~~~~~lG------------~~~~~~~~~ 173 (259)
+|+++.++..+|.++...|++. .|...++++++++|+++ .++..++ .++...++.
T Consensus 90 ~p~~~~~~~~l~~~~~~~g~~~----------~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 159 (450)
T 2y4t_A 90 KMDFTAARLQRGHLLLKQGKLD----------EAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDY 159 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred CCCcHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 9999999999999999998887 35566677777777766 6655553 334444443
Q ss_pred chHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHh
Q psy9159 174 SFFERKIAVLIVSD--------------LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAK 239 (259)
Q Consensus 174 ~~~~~~~~~~~~~~--------------~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal 239 (259)
......+..++-.. ...|++++|+.+|+++++++| +++.++..+|.+|...|++++|++.+++++
T Consensus 160 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 238 (450)
T 2y4t_A 160 TAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKN-DNTEAFYKISTLYYQLGDHELSLSEVRECL 238 (450)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHC-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 22211111110000 014889999999999999999 778999999999999999999999999999
Q ss_pred cCCCCCccc
Q psy9159 240 AIPVVSYES 248 (259)
Q Consensus 240 ~l~p~~~~~ 248 (259)
+++|.+...
T Consensus 239 ~~~p~~~~~ 247 (450)
T 2y4t_A 239 KLDQDHKRC 247 (450)
T ss_dssp HHCTTCHHH
T ss_pred HhCCChHHH
Confidence 999887653
No 44
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.83 E-value=1.9e-18 Score=147.80 Aligned_cols=181 Identities=9% Similarity=-0.022 Sum_probs=150.0
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHh-------hchhcccCcHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHH
Q psy9159 48 AKAYNLTMELNNKQPNDPDVLYRLAKACHCL-------YDIKRRENDKEASEKYILQGIEYAKKAME-LAPNNSNTQKWY 119 (259)
Q Consensus 48 ~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~-------g~~~~~~~~~~~~~~~~~~A~~~~~kal~-~~P~~~~~~~~l 119 (259)
++|+..|++++..+|+++++|+.+|..+... |+.. ...+..++|+..+++|++ ++|+++.+|..+
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~-------~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~ 105 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMN-------NAKLFSDEAANIYERAISTLLKKNMLLYFAY 105 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCH-------HHHHHHHHHHHHHHHHHTTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchh-------hcccchHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 7899999999999999999999999998754 4431 334456799999999999 799999999999
Q ss_pred HHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChh-HHHHHHHHHHHhhccchHHHHHHHHHhcCC----------
Q psy9159 120 GICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFT-LYSLKGRYQYEISKLSFFERKIAVLIVSDL---------- 188 (259)
Q Consensus 120 a~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~-~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------- 188 (259)
|.++...|++. .+...|+++++++|+++. +|..+|.++.+.++++.....+..++-..+
T Consensus 106 ~~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a 175 (308)
T 2ond_A 106 ADYEESRMKYE----------KVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAA 175 (308)
T ss_dssp HHHHHHTTCHH----------HHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHH
T ss_pred HHHHHhcCCHH----------HHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 99999888876 567899999999999997 999999999888776543333332221111
Q ss_pred -----CCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 189 -----DEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 189 -----~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
..|++++|+.+|+++++++| +++.+|..+|.++..+|++++|+..|+++++..+.++
T Consensus 176 ~~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p 237 (308)
T 2ond_A 176 LMEYYCSKDKSVAFKIFELGLKKYG-DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPP 237 (308)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCG
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCH
Confidence 14899999999999999999 7799999999999999999999999999999743333
No 45
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.82 E-value=7.9e-19 Score=159.37 Aligned_cols=200 Identities=15% Similarity=0.152 Sum_probs=146.3
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL 108 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~ 108 (259)
+.....+..++ .. |++++|+..|++++..+|+++.+++.+|.+|..+|++. +|+..+++++++
T Consensus 26 ~~~~~~g~~~~--~~-g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~--------------~A~~~~~~al~~ 88 (537)
T 3fp2_A 26 VQLKNRGNHFF--TA-KNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLE--------------KVIEFTTKALEI 88 (537)
T ss_dssp HHHHHHHHHHH--HT-TCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--Hh-ccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHhc
Confidence 34567777777 67 99999999999999999999999999999999999875 999999999999
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHH----------------------------------------------------
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKI---------------------------------------------------- 136 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~---------------------------------------------------- 136 (259)
+|+++.++..+|.++...|++..+...+
T Consensus 89 ~p~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~ 168 (537)
T 3fp2_A 89 KPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLA 168 (537)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHH
T ss_pred CCchHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHH
Confidence 9999999999999999998877654321
Q ss_pred -----------------------------------------------hcHHHHHHHHHHHHccCCCChhH-------HHH
Q psy9159 137 -----------------------------------------------KCGVVFRDQMNKAIQMAPKDFTL-------YSL 162 (259)
Q Consensus 137 -----------------------------------------------~~~~~a~~~~~kAl~l~P~~~~~-------~~~ 162 (259)
+....+...++++++.+|+++.+ +..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~ 248 (537)
T 3fp2_A 169 SFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCY 248 (537)
T ss_dssp HHHHTSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHH
T ss_pred HHHHhcChHHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHH
Confidence 12345667888899999998765 555
Q ss_pred HHHHHHHhhccchHHHHHHHHHh-------------cCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHH
Q psy9159 163 KGRYQYEISKLSFFERKIAVLIV-------------SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYA 229 (259)
Q Consensus 163 lG~~~~~~~~~~~~~~~~~~~~~-------------~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~ 229 (259)
+|.++...++.......+..++. .....|++++|+.+|+++++++| +++.++..+|.++...|+++
T Consensus 249 ~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~ 327 (537)
T 3fp2_A 249 TGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNP-EYPPTYYHRGQMYFILQDYK 327 (537)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCC-CCHHHHHHHHHHHHhcCCHH
Confidence 55655555544322221111110 11235777777777777777777 56677777777777777777
Q ss_pred HHHHHHHHHhcCCCCCc
Q psy9159 230 KAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 230 eA~~~~~kal~l~p~~~ 246 (259)
+|++.++++++++|.++
T Consensus 328 ~A~~~~~~a~~~~~~~~ 344 (537)
T 3fp2_A 328 NAKEDFQKAQSLNPENV 344 (537)
T ss_dssp HHHHHHHHHHHHCTTCS
T ss_pred HHHHHHHHHHHhCCCCH
Confidence 77777777777776655
No 46
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.82 E-value=1.4e-18 Score=159.95 Aligned_cols=184 Identities=14% Similarity=0.055 Sum_probs=137.1
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
|++++|+..|+++++.+|+++.+|..+|.+|...|++. +|++.++++++.+|+++.++..++.++.
T Consensus 387 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 452 (597)
T 2xpi_A 387 NKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHD--------------QAISAYTTAARLFQGTHLPYLFLGMQHM 452 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHTTTTCSHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 66666666666666666666666666666666655543 7777777777777777777777777777
Q ss_pred HhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhc------C-----------
Q psy9159 125 ANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVS------D----------- 187 (259)
Q Consensus 125 ~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~------~----------- 187 (259)
..|++. ++.+.++++++++|+++.+|..+|.++...++.+...+.+..++.. .
T Consensus 453 ~~g~~~----------~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l 522 (597)
T 2xpi_A 453 QLGNIL----------LANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANL 522 (597)
T ss_dssp HHTCHH----------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHH
T ss_pred HcCCHH----------HHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHH
Confidence 766665 5678888999999999999999999888887754332222211110 0
Q ss_pred ----CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhhhh
Q psy9159 188 ----LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLST 253 (259)
Q Consensus 188 ----~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~~ 253 (259)
...|++++|++.|+++++++| ++..+|..+|.+|...|++++|++.++++++++|++++....+.
T Consensus 523 ~~~~~~~g~~~~A~~~~~~~~~~~p-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~ 591 (597)
T 2xpi_A 523 GHAYRKLKMYDAAIDALNQGLLLST-NDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLK 591 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 126999999999999999999 77999999999999999999999999999999999876554443
No 47
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.82 E-value=2.6e-18 Score=142.60 Aligned_cols=188 Identities=15% Similarity=0.057 Sum_probs=150.9
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P 110 (259)
....+..++ .. |++++|+..++++++.+|+++.++..+|.+|...|++. +|+..++++++++|
T Consensus 46 ~~~l~~~~~--~~-~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~--------------~A~~~~~~al~~~~ 108 (275)
T 1xnf_A 46 LYERGVLYD--SL-GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFD--------------AAYEAFDSVLELDP 108 (275)
T ss_dssp HHHHHHHHH--HT-TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCT
T ss_pred HHHHHHHHH--Hc-ccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHH--------------HHHHHHHHHHhcCc
Confidence 344555555 56 99999999999999999999999999999999999875 99999999999999
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhc----
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVS---- 186 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~---- 186 (259)
+++.++..+|.++...|++. .+...++++++++|+++..+..++.. ...++.......+...+..
T Consensus 109 ~~~~~~~~la~~~~~~g~~~----------~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~~ 177 (275)
T 1xnf_A 109 TYNYAHLNRGIALYYGGRDK----------LAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQHFEKSDKE 177 (275)
T ss_dssp TCTHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHSCCC
T ss_pred cccHHHHHHHHHHHHhccHH----------HHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCcc
Confidence 99999999999999998887 56788999999999998777666643 4445443322222111111
Q ss_pred ---------CCCCCcHHHHHHHHHHHHhhCCCCc----HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 187 ---------DLDEPTAEDAIANCLKAEELAPAPW----KENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 187 ---------~~~~g~~~eAi~~~~kAi~l~P~~~----~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
....++.++|+..++++++.+| .. ..++..+|.++..+|++++|++.|+++++++|.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 178 QWGWNIVEFYLGNISEQTLMERLKADATDNT-SLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFV 250 (275)
T ss_dssp STHHHHHHHHTTSSCHHHHHHHHHHHCCSHH-HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTCH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHhcccc-cccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhHH
Confidence 0124677899999999988877 33 578999999999999999999999999999997754
No 48
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.82 E-value=3.9e-19 Score=151.04 Aligned_cols=164 Identities=9% Similarity=-0.027 Sum_probs=145.3
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL 108 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~ 108 (259)
+..+..+..++ .. |++++|+..|+++++.+|+++++++.+|.++...|++. +|+..++++++.
T Consensus 118 ~~~~~~a~~~~--~~-g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~--------------~A~~~l~~~~~~ 180 (287)
T 3qou_A 118 ELXAQQAMQLM--QE-SNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSE--------------DAEAVLXTIPLQ 180 (287)
T ss_dssp HHHHHHHHHHH--HT-TCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHH--------------HHHHHHTTSCGG
T ss_pred hhHHHHHHHHH--hC-CCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHH--------------HHHHHHHhCchh
Confidence 34567777777 67 99999999999999999999999999999999999875 999999999999
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
+|++...+...+..+...+... .+...++++++++|+++.+++.+|.++...
T Consensus 181 ~p~~~~~~~~~~~~l~~~~~~~----------~a~~~l~~al~~~P~~~~~~~~la~~l~~~------------------ 232 (287)
T 3qou_A 181 DQDTRYQGLVAQIELLXQAADT----------PEIQQLQQQVAENPEDAALATQLALQLHQV------------------ 232 (287)
T ss_dssp GCSHHHHHHHHHHHHHHHHTSC----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT------------------
T ss_pred hcchHHHHHHHHHHHHhhcccC----------ccHHHHHHHHhcCCccHHHHHHHHHHHHHc------------------
Confidence 9977666666666666666655 356889999999999999999999999875
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCc--HHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 189 DEPTAEDAIANCLKAEELAPAPW--KENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~~~--~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
|++++|+..|.++++.+| ++ ..++..|+.++..+|+.++|+..|++++.
T Consensus 233 --g~~~~A~~~l~~~l~~~p-~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 233 --GRNEEALELLFGHLRXDL-TAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp --TCHHHHHHHHHHHHHHCT-TGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHhccc-ccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 889999999999999999 66 77899999999999999999999999975
No 49
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.81 E-value=3.1e-18 Score=137.56 Aligned_cols=172 Identities=15% Similarity=0.065 Sum_probs=153.5
Q ss_pred HHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHh-hchhcccCcHHHHHHHHHHHHHHHHHHHH--hCC
Q psy9159 34 EIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCL-YDIKRRENDKEASEKYILQGIEYAKKAME--LAP 110 (259)
Q Consensus 34 ~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~-g~~~~~~~~~~~~~~~~~~A~~~~~kal~--~~P 110 (259)
.+..+. .. |++++|+..+++++..+|+++.++..+|.++... |++. +|+..++++++ .+|
T Consensus 48 l~~~~~--~~-~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~--------------~A~~~~~~~~~~~~~~ 110 (225)
T 2vq2_A 48 RAEIYQ--YL-KVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPA--------------ESMAYFDKALADPTYP 110 (225)
T ss_dssp HHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHH--------------HHHHHHHHHHTSTTCS
T ss_pred HHHHHH--Hc-CChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHH--------------HHHHHHHHHHcCcCCc
Confidence 344444 56 9999999999999999999999999999999999 8875 99999999999 777
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCC
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDE 190 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (259)
+++.++..+|.++...|++. .+...++++++++|+++.++..+|.++...
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-------------------- 160 (225)
T 2vq2_A 111 TPYIANLNKGICSAKQGQFG----------LAEAYLKRSLAAQPQFPPAFKELARTKMLA-------------------- 160 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHH--------------------
T ss_pred chHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCchHHHHHHHHHHHc--------------------
Confidence 77899999999999998887 567899999999999999999999999875
Q ss_pred CcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhhh
Q psy9159 191 PTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~ 252 (259)
|++++|+.+++++++++|.++...+..++.++...|+.++|..+++.+.+.+|++++....+
T Consensus 161 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~~~~l 222 (225)
T 2vq2_A 161 GQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEELQTVL 222 (225)
T ss_dssp TCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCHHHHHHh
Confidence 88999999999999999933477788899999999999999999999999999988766554
No 50
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.81 E-value=3.6e-19 Score=161.60 Aligned_cols=172 Identities=13% Similarity=0.061 Sum_probs=148.3
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhch-hcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDI-KRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICV 123 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~-~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~ 123 (259)
+.+++++..+.+.....|+++.+++.+|.++...|++ . +|+..++++++++|+++.+|..+|.++
T Consensus 82 ~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~--------------~A~~~~~~al~~~p~~~~a~~~lg~~~ 147 (474)
T 4abn_A 82 EEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSP--------------EAEVLLSKAVKLEPELVEAWNQLGEVY 147 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHH--------------HHHHHHHHHHhhCCCCHHHHHHHHHHH
Confidence 4588889999999999999999999999999999988 6 999999999999999999999999999
Q ss_pred HHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHH
Q psy9159 124 GANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKA 203 (259)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kA 203 (259)
...|++. .|...++++++++|+ +.++..+|.++.....-....+ .|++++|+.+|++|
T Consensus 148 ~~~g~~~----------~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~-----------~g~~~~A~~~~~~a 205 (474)
T 4abn_A 148 WKKGDVT----------SAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEH-----------SRHVMDSVRQAKLA 205 (474)
T ss_dssp HHHTCHH----------HHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHH-----------HHHHHHHHHHHHHH
T ss_pred HHcCCHH----------HHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhh-----------hhhHHHHHHHHHHH
Confidence 9999887 577999999999999 7999999998876411101111 17799999999999
Q ss_pred HhhCCCCcHHhHHHHHHHHHHh--------CCHHHHHHHHHHHhcCCCCCccchhhhh
Q psy9159 204 EELAPAPWKENQLLIAKCYIEA--------GEYAKAVQWLDKAKAIPVVSYESHDLST 253 (259)
Q Consensus 204 i~l~P~~~~~~~~~la~~~~~~--------g~~~eA~~~~~kal~l~p~~~~~~~~~~ 253 (259)
++++| ++..+|..+|.+|..+ |++++|+++|+++++++|...++.....
T Consensus 206 l~~~p-~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 262 (474)
T 4abn_A 206 VQMDV-LDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHL 262 (474)
T ss_dssp HHHCT-TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHH
T ss_pred HHhCC-CCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence 99999 7899999999999999 9999999999999999983223334333
No 51
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.80 E-value=9.4e-19 Score=156.88 Aligned_cols=193 Identities=16% Similarity=0.076 Sum_probs=124.0
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
|++++|+..+++++..+|+++.++..+|.+|...|++. +|+..++++++++|+++.++..+|.++.
T Consensus 227 ~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~--------------~A~~~~~~al~~~p~~~~~~~~lg~~y~ 292 (472)
T 4g1t_A 227 EEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPD--------------KAIELLKKALEYIPNNAYLHCQIGCCYR 292 (472)
T ss_dssp ---CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchH--------------HHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 56677777777777777777777777777777777654 9999999999999999999999998876
Q ss_pred Hhhchhh---------HHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHH-----------
Q psy9159 125 ANGQFQS---------LKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLI----------- 184 (259)
Q Consensus 125 ~~~~~~~---------~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~----------- 184 (259)
..+.... ..........+...++++++++|+++.++..+|.++...++++.....+..++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~ 372 (472)
T 4g1t_A 293 AKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQL 372 (472)
T ss_dssp HHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHH
Confidence 5432211 11122233467889999999999999999999999998887653322221111
Q ss_pred ----hc---CCCCCcHHHHHHHHHHHHhhCCC-----------------------CcHHhHHHHHHHHHHhCCHHHHHHH
Q psy9159 185 ----VS---DLDEPTAEDAIANCLKAEELAPA-----------------------PWKENQLLIAKCYIEAGEYAKAVQW 234 (259)
Q Consensus 185 ----~~---~~~~g~~~eAi~~~~kAi~l~P~-----------------------~~~~~~~~la~~~~~~g~~~eA~~~ 234 (259)
++ ....|++++|+.+|++|++++|+ +++.++..||.+|..+|++++|+++
T Consensus 373 ~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~ 452 (472)
T 4g1t_A 373 LHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADED 452 (472)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 01 11358999999999999877541 4467899999999999999999999
Q ss_pred HHHHhcCCCCCccchhh
Q psy9159 235 LDKAKAIPVVSYESHDL 251 (259)
Q Consensus 235 ~~kal~l~p~~~~~~~~ 251 (259)
|++|++++|.+|....+
T Consensus 453 y~kALe~~~~~p~a~~~ 469 (472)
T 4g1t_A 453 SERGLESGSLIPSASSW 469 (472)
T ss_dssp -----------------
T ss_pred HHHHHhcCCCCCcHhhc
Confidence 99999999999876544
No 52
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.80 E-value=4.1e-18 Score=145.14 Aligned_cols=177 Identities=8% Similarity=-0.073 Sum_probs=140.6
Q ss_pred CCcCCHHHHHHHHHHHhhc--CCCCHHHHHHHHHHHHHhhchhcc------cCcH---------HHHHHHHHHHHHHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNK--QPNDPDVLYRLAKACHCLYDIKRR------ENDK---------EASEKYILQGIEYAKK 104 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~--~p~~~~~~~~la~~~~~~g~~~~~------~~~~---------~~~~~~~~~A~~~~~k 104 (259)
.. +++++|++.+++++.. +|+++.+++.+|.++...|++.+. +.+. -.+.+.+++|+..+++
T Consensus 77 ~~-~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~~~~~~~~~~l~~~~~~~g~~~~A~~~l~~ 155 (291)
T 3mkr_A 77 SH-SRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQGDSLECMAMTVQILLKLDRLDLARKELKK 155 (291)
T ss_dssp CS-TTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTTCCSHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CC-CcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45 8999999999999875 699999999999999999987631 1111 1234567888888888
Q ss_pred HHHhCCCChHHHHHHHHHHH--HhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHH
Q psy9159 105 AMELAPNNSNTQKWYGICVG--ANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAV 182 (259)
Q Consensus 105 al~~~P~~~~~~~~la~~~~--~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~ 182 (259)
+++++|++.......+++.. ..|++ .+|...++++++.+|+++.+|+.+|.++...
T Consensus 156 ~~~~~p~~~~~~l~~a~~~l~~~~~~~----------~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~------------ 213 (291)
T 3mkr_A 156 MQDQDEDATLTQLATAWVSLAAGGEKL----------QDAYYIFQEMADKCSPTLLLLNGQAACHMAQ------------ 213 (291)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHCTTHH----------HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHT------------
T ss_pred HHhhCcCcHHHHHHHHHHHHHhCchHH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc------------
Confidence 88888887644332222221 11233 2678899999999999999999999988875
Q ss_pred HHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHH-HHHHHHHHhcCCCCCccchh
Q psy9159 183 LIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAK-AVQWLDKAKAIPVVSYESHD 250 (259)
Q Consensus 183 ~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~e-A~~~~~kal~l~p~~~~~~~ 250 (259)
|++++|+.+|+++++++| +++.++.++|.++..+|+.++ +.++++++++++|+++.-..
T Consensus 214 --------g~~~eA~~~l~~al~~~p-~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 214 --------GRWEAAEGVLQEALDKDS-GHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp --------TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred --------CCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 889999999999999999 789999999999999999976 57899999999999886443
No 53
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.80 E-value=6.7e-19 Score=135.96 Aligned_cols=115 Identities=14% Similarity=0.009 Sum_probs=108.0
Q ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhh
Q psy9159 52 NLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQS 131 (259)
Q Consensus 52 ~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~ 131 (259)
..+++++..+|+++++++.+|.++...|++. +|+..|+++++++|+++.+|..+|.++...|++.
T Consensus 23 ~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~--------------eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~- 87 (151)
T 3gyz_A 23 ATLKDINAIPDDMMDDIYSYAYDFYNKGRIE--------------EAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQ- 87 (151)
T ss_dssp CCTGGGCCSCHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-
T ss_pred CCHHHHhCCCHHHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHH-
Confidence 4578889999999999999999999999976 9999999999999999999999999999999988
Q ss_pred HHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCc
Q psy9159 132 LKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPW 211 (259)
Q Consensus 132 ~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~ 211 (259)
.|+..|+++++++|+++.+|+.+|.++..+ |++++|+.+|++++++.| +.
T Consensus 88 ---------~Ai~~~~~al~l~P~~~~~~~~lg~~~~~l--------------------g~~~eA~~~~~~al~l~~-~~ 137 (151)
T 3gyz_A 88 ---------QAADLYAVAFALGKNDYTPVFHTGQCQLRL--------------------KAPLKAKECFELVIQHSN-DE 137 (151)
T ss_dssp ---------HHHHHHHHHHHHSSSCCHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCC-CH
T ss_pred ---------HHHHHHHHHHhhCCCCcHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCC-CH
Confidence 578999999999999999999999999885 889999999999999999 53
No 54
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.80 E-value=3.4e-18 Score=145.66 Aligned_cols=161 Identities=6% Similarity=-0.021 Sum_probs=127.9
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcc-----------cCcHH-----H--H--
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRR-----------ENDKE-----A--S-- 91 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~-----------~~~~~-----~--~-- 91 (259)
+..+..+. .. |++++|+..+++ |++++++..+|.++..+|+..+. +.+.. . .
T Consensus 105 ~~la~~~~--~~-g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~ 176 (291)
T 3mkr_A 105 LMAASIYF--YD-QNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLA 176 (291)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HC-CCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH
Confidence 33444444 45 899999998888 88899999999999988886631 11110 0 1
Q ss_pred --HHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH
Q psy9159 92 --EKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE 169 (259)
Q Consensus 92 --~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~ 169 (259)
.+.+++|+..++++++.+|+++.++..+|.++...|++. +|...++++++++|+++.++..+|.++..
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~----------eA~~~l~~al~~~p~~~~~l~~l~~~~~~ 246 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWE----------AAEGVLQEALDKDSGHPETLINLVVLSQH 246 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 156899999999999999999999999999999999987 57799999999999999999999998877
Q ss_pred hhccchHHHHHHHHHhcCCCCCcHHH-HHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHH
Q psy9159 170 ISKLSFFERKIAVLIVSDLDEPTAED-AIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWL 235 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~g~~~e-Ai~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~ 235 (259)
. |+.++ +..+++++++++| +++.+ .....+.+.|+++..-|
T Consensus 247 ~--------------------g~~~eaa~~~~~~~~~~~P-~~~~~----~d~~~~~~~fd~~~~~~ 288 (291)
T 3mkr_A 247 L--------------------GKPPEVTNRYLSQLKDAHR-SHPFI----KEYRAKENDFDRLVLQY 288 (291)
T ss_dssp T--------------------TCCHHHHHHHHHHHHHHCT-TCHHH----HHHHHHHHHHHHHHHHH
T ss_pred c--------------------CCCHHHHHHHHHHHHHhCC-CChHH----HHHHHHHHHHHHHHHHc
Confidence 5 66765 6789999999999 66553 34566677777776655
No 55
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.80 E-value=2.4e-18 Score=142.82 Aligned_cols=159 Identities=11% Similarity=0.033 Sum_probs=138.3
Q ss_pred CCcCCHHHHHHHHHHHhhc----CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNK----QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQK 117 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~----~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~ 117 (259)
.. |++++|+..++++++. .|.++.+++.+|.++...|++. +|+..++++++++|+++.++.
T Consensus 17 ~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------------~A~~~~~~al~~~~~~~~~~~ 81 (275)
T 1xnf_A 17 PT-LQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRA--------------LARNDFSQALAIRPDMPEVFN 81 (275)
T ss_dssp CC-HHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCCCCHHHHH
T ss_pred cc-chHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHH--------------HHHHHHHHHHHcCCCcHHHHH
Confidence 45 9999999999999997 4677899999999999999875 999999999999999999999
Q ss_pred HHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHH
Q psy9159 118 WYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAI 197 (259)
Q Consensus 118 ~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi 197 (259)
.+|.++...|++. .+...++++++++|+++.++..+|.++... |++++|+
T Consensus 82 ~la~~~~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~la~~~~~~--------------------g~~~~A~ 131 (275)
T 1xnf_A 82 YLGIYLTQAGNFD----------AAYEAFDSVLELDPTYNYAHLNRGIALYYG--------------------GRDKLAQ 131 (275)
T ss_dssp HHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCTHHHHHHHHHHHHT--------------------TCHHHHH
T ss_pred HHHHHHHHccCHH----------HHHHHHHHHHhcCccccHHHHHHHHHHHHh--------------------ccHHHHH
Confidence 9999999999887 567899999999999999999999999875 7789999
Q ss_pred HHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 198 ANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 198 ~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
.+|+++++++| ++......++.+ ...|++++|+..+++++...|.+..
T Consensus 132 ~~~~~a~~~~~-~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~ 179 (275)
T 1xnf_A 132 DDLLAFYQDDP-NDPFRSLWLYLA-EQKLDEKQAKEVLKQHFEKSDKEQW 179 (275)
T ss_dssp HHHHHHHHHCT-TCHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHSCCCST
T ss_pred HHHHHHHHhCC-CChHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCcchH
Confidence 99999999999 556555544444 6668999999999888888776543
No 56
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.80 E-value=4.5e-19 Score=167.77 Aligned_cols=169 Identities=11% Similarity=0.003 Sum_probs=141.9
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P 110 (259)
.+..+..++ .. |++++|+..++++++.+|+++++++.+|.++...|++. +|+..|+++++++|
T Consensus 436 ~~~~a~~~~--~~-g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~--------------~A~~~~~~al~l~P 498 (681)
T 2pzi_A 436 PLMEVRALL--DL-GDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYD--------------SATKHFTEVLDTFP 498 (681)
T ss_dssp HHHHHHHHH--HH-TCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHST
T ss_pred HHHHHHHHH--hc-CCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCC
Confidence 345565666 56 99999999999999999999999999999999999875 99999999999999
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCC
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDE 190 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (259)
+++.++..+|.++...|++. . ...|++|++++|+++.+|+.+|.++...
T Consensus 499 ~~~~~~~~lg~~~~~~g~~~----------~-~~~~~~al~~~P~~~~a~~~lg~~~~~~-------------------- 547 (681)
T 2pzi_A 499 GELAPKLALAATAELAGNTD----------E-HKFYQTVWSTNDGVISAAFGLARARSAE-------------------- 547 (681)
T ss_dssp TCSHHHHHHHHHHHHHTCCC----------T-TCHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------
T ss_pred CChHHHHHHHHHHHHcCChH----------H-HHHHHHHHHhCCchHHHHHHHHHHHHHc--------------------
Confidence 99999999999999999987 4 4788999999999999999999999875
Q ss_pred CcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCC-----HHHHHHHHHHHhcCCCCCccc
Q psy9159 191 PTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGE-----YAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~-----~~eA~~~~~kal~l~p~~~~~ 248 (259)
|++++|+.+|++|++++| ++..++.++|.++...++ .++..+..+....+.+.+++.
T Consensus 548 g~~~~A~~~~~~al~l~P-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~~~~~~~~ 609 (681)
T 2pzi_A 548 GDRVGAVRTLDEVPPTSR-HFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEALPPTEPRV 609 (681)
T ss_dssp TCHHHHHHHHHTSCTTST-THHHHHHHHHHHTC-------CCHHHHHHHHHHHHTSCTTSTTH
T ss_pred CCHHHHHHHHHhhcccCc-ccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhCCCCcHHH
Confidence 889999999999999999 789999999999988776 233333334444455544443
No 57
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.79 E-value=1.3e-18 Score=156.05 Aligned_cols=188 Identities=15% Similarity=0.063 Sum_probs=119.1
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcc--------------cCcHH-------------HHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRR--------------ENDKE-------------ASEKY 94 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~--------------~~~~~-------------~~~~~ 94 (259)
+. ++|++|++.|+++++.+|++++++..+|.++..+++..+. +.+.. ...+.
T Consensus 150 ~~-~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~ 228 (472)
T 4g1t_A 150 GG-NQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEE 228 (472)
T ss_dssp CT-THHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC-----
T ss_pred cc-ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhH
Confidence 44 7899999999999999999999999999998877654321 01110 11234
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccc
Q psy9159 95 ILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174 (259)
Q Consensus 95 ~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~ 174 (259)
+++|...+++++.++|+++.++..+|.++...|++. .+...++++++++|+++.+++.+|.+|.......
T Consensus 229 ~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~ 298 (472)
T 4g1t_A 229 EGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPD----------KAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQV 298 (472)
T ss_dssp -CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchH----------HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHh
Confidence 567777777777777777777777777777777665 5678889999999999999999998875532110
Q ss_pred ----hHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 175 ----FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 175 ----~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
......... ..+.+++|+.+|+++++++| ....++..+|.++..+|++++|+++|+++++++|.+.
T Consensus 299 ~~~~~~~~~~~~~-----~~~~~~~A~~~~~~a~~~~~-~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 299 MNLRENGMYGKRK-----LLELIGHAVAHLKKADEAND-NLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHC------CHHH-----HHHHHHHHHHHHHHHHHHCT-TTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred hhHHHHHHHHHHH-----HHhhHHHHHHHHHHHhhcCC-chhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 000000000 01234555556666666655 4455555566666666666666666666655555443
No 58
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.79 E-value=1.8e-18 Score=149.72 Aligned_cols=154 Identities=12% Similarity=0.074 Sum_probs=143.7
Q ss_pred CCcCCHHHHHHHHHHHhhcCCC--CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPN--DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWY 119 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~--~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~l 119 (259)
.. |++++|+..++++++.+|+ ++.++..+|.++...|++. +|+..++++++++|+++.++..+
T Consensus 193 ~~-~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al~~~~~~~~~~~~l 257 (368)
T 1fch_A 193 SD-SLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYD--------------KAVDCFTAALSVRPNDYLLWNKL 257 (368)
T ss_dssp HH-HHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hc-ccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCcCCHHHHHHH
Confidence 45 9999999999999999999 8999999999999999875 99999999999999999999999
Q ss_pred HHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHH
Q psy9159 120 GICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIAN 199 (259)
Q Consensus 120 a~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~ 199 (259)
|.++...|++. .+...++++++++|+++.++..+|.++... |++++|+.+
T Consensus 258 ~~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~l~~~~~~~--------------------g~~~~A~~~ 307 (368)
T 1fch_A 258 GATLANGNQSE----------EAVAAYRRALELQPGYIRSRYNLGISCINL--------------------GAHREAVEH 307 (368)
T ss_dssp HHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH--------------------TCHHHHHHH
T ss_pred HHHHHHcCCHH----------HHHHHHHHHHHhCCCcHHHHHHHHHHHHHC--------------------CCHHHHHHH
Confidence 99999999887 567899999999999999999999999886 889999999
Q ss_pred HHHHHhhCCCCc-----------HHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 200 CLKAEELAPAPW-----------KENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 200 ~~kAi~l~P~~~-----------~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
|+++++++| +. ..+|..+|.++..+|++++|...++++++.
T Consensus 308 ~~~al~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~ 359 (368)
T 1fch_A 308 FLEALNMQR-KSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARDLST 359 (368)
T ss_dssp HHHHHHHHH-TC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHH
T ss_pred HHHHHHhCC-CCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHH
Confidence 999999999 55 788999999999999999999999888764
No 59
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.79 E-value=5.4e-19 Score=135.69 Aligned_cols=123 Identities=14% Similarity=0.058 Sum_probs=113.5
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHH
Q psy9159 99 IEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFER 178 (259)
Q Consensus 99 ~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~ 178 (259)
-..++++++++|+++.+++.+|.++...|++. .|...++++++++|+++.+|+.+|.++...
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~----------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-------- 68 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYE----------DAHXVFQALCVLDHYDSRFFLGLGACRQAM-------- 68 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChH----------HHHHHHHHHHHcCcccHHHHHHHHHHHHHH--------
Confidence 34688999999999999999999999999987 567899999999999999999999999875
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhhh
Q psy9159 179 KIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 179 ~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~ 252 (259)
|++++|+.+|+++++++| +++.+++++|.+|..+|++++|+++|+++++++|++++...+.
T Consensus 69 ------------g~~~~A~~~~~~al~l~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 129 (148)
T 2vgx_A 69 ------------GQYDLAIHSYSYGAVMDI-XEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELS 129 (148)
T ss_dssp ------------TCHHHHHHHHHHHHHHST-TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHH
T ss_pred ------------hhHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHH
Confidence 889999999999999999 7789999999999999999999999999999999988765543
No 60
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.79 E-value=1e-18 Score=148.29 Aligned_cols=158 Identities=11% Similarity=0.031 Sum_probs=146.9
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGI 121 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~ 121 (259)
.. |++++|+..++++++.+|+++.++..+|.++...|++. +|+..++++++++|+++.++..+|.
T Consensus 150 ~~-~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~--------------~A~~~~~~~~~~~~~~~~~~~~l~~ 214 (327)
T 3cv0_A 150 AP-NEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYD--------------SAAANLRRAVELRPDDAQLWNKLGA 214 (327)
T ss_dssp SH-HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred Hc-ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHH--------------HHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 44 99999999999999999999999999999999999875 9999999999999999999999999
Q ss_pred HHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHH
Q psy9159 122 CVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCL 201 (259)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~ 201 (259)
++...|++. ++...++++++++|+++.++..+|.++... |++++|+.+|+
T Consensus 215 ~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~--------------------g~~~~A~~~~~ 264 (327)
T 3cv0_A 215 TLANGNRPQ----------EALDAYNRALDINPGYVRVMYNMAVSYSNM--------------------SQYDLAAKQLV 264 (327)
T ss_dssp HHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHH
T ss_pred HHHHcCCHH----------HHHHHHHHHHHcCCCCHHHHHHHHHHHHHh--------------------ccHHHHHHHHH
Confidence 999998887 567899999999999999999999999875 88999999999
Q ss_pred HHHhhCCCC------------cHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCC
Q psy9159 202 KAEELAPAP------------WKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 202 kAi~l~P~~------------~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~ 245 (259)
++++++| . ...++..+|.++..+|++++|...++++++..|.+
T Consensus 265 ~a~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~ 319 (327)
T 3cv0_A 265 RAIYMQV-GGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKE 319 (327)
T ss_dssp HHHHHHT-TSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHHH
T ss_pred HHHHhCC-ccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchh
Confidence 9999999 6 68899999999999999999999999998876543
No 61
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.78 E-value=2.4e-17 Score=151.78 Aligned_cols=179 Identities=13% Similarity=0.207 Sum_probs=129.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
|++++|+..++++++.+|+++.++..+|.+|...|+ +++|+..++++++++|++..+|..++.++.
T Consensus 353 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 418 (597)
T 2xpi_A 353 GEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNK--------------ISEARRYFSKSSTMDPQFGPAWIGFAHSFA 418 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhcc--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 444444444444444444444444444444444444 458888888888888888888888888888
Q ss_pred HhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcC--------------CCC
Q psy9159 125 ANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSD--------------LDE 190 (259)
Q Consensus 125 ~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~--------------~~~ 190 (259)
..|++. +|.+.++++++++|+++.+|..+|.+|...++.+...+.+..++... ...
T Consensus 419 ~~g~~~----------~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 488 (597)
T 2xpi_A 419 IEGEHD----------QAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNK 488 (597)
T ss_dssp HHTCHH----------HHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT
T ss_pred HcCCHH----------HHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Confidence 888776 56788999999999999999999999988877654333332221111 115
Q ss_pred CcHHHHHHHHHHHHhh------CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 191 PTAEDAIANCLKAEEL------APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l------~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|++++|+++|++++++ +|+....+|..+|.++...|++++|++.++++++++|.++.
T Consensus 489 g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 551 (597)
T 2xpi_A 489 SDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDAN 551 (597)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHH
T ss_pred CCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChH
Confidence 8999999999999998 67223678999999999999999999999999999887664
No 62
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.5e-18 Score=156.26 Aligned_cols=176 Identities=14% Similarity=0.112 Sum_probs=115.5
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcc-----------cCcHH---------HHHHHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRR-----------ENDKE---------ASEKYILQGIEYAKK 104 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~-----------~~~~~---------~~~~~~~~A~~~~~k 104 (259)
|++++|+..+++++..+|+++.++..+|.++...|++.+. +.+.. ...+.+++|+..+++
T Consensus 284 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 363 (514)
T 2gw1_A 284 NDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSE 363 (514)
T ss_dssp SCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 6777777777777777777777777777777766665400 00000 000112355555555
Q ss_pred HHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChh------HHHHHHHHHHHhhccchHHH
Q psy9159 105 AMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFT------LYSLKGRYQYEISKLSFFER 178 (259)
Q Consensus 105 al~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~------~~~~lG~~~~~~~~~~~~~~ 178 (259)
+++.+|+++.++..+|.++...|++. .+...++++++++|+++. ++..+|.++...
T Consensus 364 ~~~~~~~~~~~~~~la~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~-------- 425 (514)
T 2gw1_A 364 AKRKFPEAPEVPNFFAEILTDKNDFD----------KALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRN-------- 425 (514)
T ss_dssp HHHHSTTCSHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTS--------
T ss_pred HHHHcccCHHHHHHHHHHHHHCCCHH----------HHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhh--------
Confidence 55555555555555555555444443 344555666666665544 566666555440
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 179 KIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 179 ~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
...|++++|+.+|+++++++| ++..++..+|.++...|++++|++.|+++++++|++++-
T Consensus 426 ---------~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 485 (514)
T 2gw1_A 426 ---------PTVENFIEATNLLEKASKLDP-RSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEK 485 (514)
T ss_dssp ---------CCTTHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHH
T ss_pred ---------hhcCCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHH
Confidence 002889999999999999999 779999999999999999999999999999999887654
No 63
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.78 E-value=1.9e-18 Score=146.95 Aligned_cols=172 Identities=10% Similarity=-0.026 Sum_probs=137.9
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCC------CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHH
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPN------DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKK 104 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~------~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~k 104 (259)
.+.++..+++ .. |++++|+..|.+++...+. .+.++..+|.+|..+|++. +|+..+++
T Consensus 39 ~~~~a~~~~~-~~-g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~--------------~A~~~~~~ 102 (292)
T 1qqe_A 39 LCVQAATIYR-LR-KELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSV--------------NAVDSLEN 102 (292)
T ss_dssp HHHHHHHHHH-HT-TCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHH
T ss_pred HHHHHHHHHH-Hc-CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHH--------------HHHHHHHH
Confidence 4555555553 45 9999999999999987432 2678999999999999875 99999999
Q ss_pred HHHhCCCC------hHHHHHHHHHHHHh-hchhhHHHHHhcHHHHHHHHHHHHccCCCC------hhHHHHHHHHHHHhh
Q psy9159 105 AMELAPNN------SNTQKWYGICVGAN-GQFQSLKEKIKCGVVFRDQMNKAIQMAPKD------FTLYSLKGRYQYEIS 171 (259)
Q Consensus 105 al~~~P~~------~~~~~~la~~~~~~-~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~------~~~~~~lG~~~~~~~ 171 (259)
|+++.|+. +.++..+|.++... |++. .|+.+|++|+++.|.+ ..++..+|.++...
T Consensus 103 Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~----------~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~- 171 (292)
T 1qqe_A 103 AIQIFTHRGQFRRGANFKFELGEILENDLHDYA----------KAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALD- 171 (292)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHH----------HHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHh-
Confidence 99998865 45788889988885 8877 5789999999999875 46788899988875
Q ss_pred ccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHH-------hHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 172 KLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKE-------NQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~-------~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
|++++|+.+|++++++.| ++.. .+..+|.|+..+|++++|+..|+++++++|.
T Consensus 172 -------------------g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 231 (292)
T 1qqe_A 172 -------------------GQYIEASDIYSKLIKSSM-GNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPN 231 (292)
T ss_dssp -------------------TCHHHHHHHHHHHHHTTS-SCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---
T ss_pred -------------------CCHHHHHHHHHHHHHHHh-cCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 889999999999999998 4332 5789999999999999999999999999998
Q ss_pred Cccch
Q psy9159 245 SYESH 249 (259)
Q Consensus 245 ~~~~~ 249 (259)
..+..
T Consensus 232 ~~~~~ 236 (292)
T 1qqe_A 232 FADSR 236 (292)
T ss_dssp -----
T ss_pred CCCcH
Confidence 77643
No 64
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.78 E-value=6.9e-18 Score=140.40 Aligned_cols=159 Identities=14% Similarity=0.093 Sum_probs=133.9
Q ss_pred hhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHhhchhhHHH
Q psy9159 58 NNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN---SNTQKWYGICVGANGQFQSLKE 134 (259)
Q Consensus 58 ~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~---~~~~~~la~~~~~~~~~~~~~~ 134 (259)
...+|+++++++.+|.++...|++. +|+..++++++.+|++ +.+++++|.++...|++.
T Consensus 8 ~~~~~~~~~~~~~~a~~~~~~g~~~--------------~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~---- 69 (261)
T 3qky_A 8 GRLRHSSPQEAFERAMEFYNQGKYD--------------RAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYL---- 69 (261)
T ss_dssp ---CCSSHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHH----
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCHH--------------HHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHH----
Confidence 4568999999999999999999875 9999999999999999 899999999999999987
Q ss_pred HHhcHHHHHHHHHHHHccCCCC---hhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCc
Q psy9159 135 KIKCGVVFRDQMNKAIQMAPKD---FTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPW 211 (259)
Q Consensus 135 ~~~~~~~a~~~~~kAl~l~P~~---~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~ 211 (259)
.|...++++++++|++ +.+++.+|.+++..+.. .....|++++|+..|+++++.+| ++
T Consensus 70 ------~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~------------~~~~~~~~~~A~~~~~~~l~~~p-~~ 130 (261)
T 3qky_A 70 ------LAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPP------------YELDQTDTRKAIEAFQLFIDRYP-NH 130 (261)
T ss_dssp ------HHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCC------------TTSCCHHHHHHHHHHHHHHHHCT-TC
T ss_pred ------HHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccc------------ccccchhHHHHHHHHHHHHHHCc-Cc
Confidence 5678999999999966 46899999998873210 00113789999999999999999 55
Q ss_pred HHhH-----------------HHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhhhh
Q psy9159 212 KENQ-----------------LLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLST 253 (259)
Q Consensus 212 ~~~~-----------------~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~~ 253 (259)
..+. +.+|.+|...|++++|+..|+++++..|+++.....+.
T Consensus 131 ~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~ 189 (261)
T 3qky_A 131 ELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALV 189 (261)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHH
Confidence 5555 88999999999999999999999999998776554443
No 65
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.77 E-value=8.2e-19 Score=133.23 Aligned_cols=122 Identities=11% Similarity=0.066 Sum_probs=110.0
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHH
Q psy9159 100 EYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERK 179 (259)
Q Consensus 100 ~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~ 179 (259)
..++++++++|+++.+++.+|.++...|++. .+...++++++++|+++.+|+.+|.++...
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~----------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------- 65 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWD----------DAQKIFQALCMLDHYDARYFLGLGACRQSL--------- 65 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT---------
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHH----------HHHHHHHHHHHhCCccHHHHHHHHHHHHHH---------
Confidence 4678899999999999999999999999887 567899999999999999999999999875
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhhh
Q psy9159 180 IAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 180 ~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~ 252 (259)
|++++|+.+|+++++++| +++.+++++|.+|..+|++++|+++|+++++++|.+++...+.
T Consensus 66 -----------g~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 126 (142)
T 2xcb_A 66 -----------GLYEQALQSYSYGALMDI-NEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALA 126 (142)
T ss_dssp -----------TCHHHHHHHHHHHHHHCT-TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHH
T ss_pred -----------hhHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHH
Confidence 889999999999999999 7899999999999999999999999999999999988766543
No 66
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.76 E-value=2.2e-18 Score=132.27 Aligned_cols=119 Identities=16% Similarity=0.056 Sum_probs=109.6
Q ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhh
Q psy9159 52 NLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQS 131 (259)
Q Consensus 52 ~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~ 131 (259)
..+++++..+|+++++++.+|.++...|++. +|+..++++++++|+++.+|..+|.++...|++.
T Consensus 8 ~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~- 72 (148)
T 2vgx_A 8 GTIAMLNEISSDTLEQLYSLAFNQYQSGXYE--------------DAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYD- 72 (148)
T ss_dssp CSHHHHTTCCHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-
T ss_pred hhHHHHHcCCHhhHHHHHHHHHHHHHcCChH--------------HHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHH-
Confidence 4578899999999999999999999999876 9999999999999999999999999999999987
Q ss_pred HHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCc
Q psy9159 132 LKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPW 211 (259)
Q Consensus 132 ~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~ 211 (259)
.|...++++++++|+++.+++.+|.++... |++++|+.+|+++++++| ++
T Consensus 73 ---------~A~~~~~~al~l~p~~~~~~~~lg~~~~~~--------------------g~~~~A~~~~~~al~~~p-~~ 122 (148)
T 2vgx_A 73 ---------LAIHSYSYGAVMDIXEPRFPFHAAECLLQX--------------------GELAEAESGLFLAQELIA-NX 122 (148)
T ss_dssp ---------HHHHHHHHHHHHSTTCTHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHT-TC
T ss_pred ---------HHHHHHHHHHhcCCCCchHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHHCc-CC
Confidence 567899999999999999999999999875 889999999999999999 55
Q ss_pred HHhH
Q psy9159 212 KENQ 215 (259)
Q Consensus 212 ~~~~ 215 (259)
+...
T Consensus 123 ~~~~ 126 (148)
T 2vgx_A 123 PEFX 126 (148)
T ss_dssp GGGH
T ss_pred Ccch
Confidence 5543
No 67
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.76 E-value=3.7e-17 Score=139.77 Aligned_cols=169 Identities=8% Similarity=-0.071 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHH
Q psy9159 47 KAKAYNLTMELNN-KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN-TQKWYGICVG 124 (259)
Q Consensus 47 ~~~A~~~~~~~~~-~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~-~~~~la~~~~ 124 (259)
+++|+..|+++++ .+|+++.+|..+|.++...|+.. +|+..|+++++++|+++. +|..+|.++.
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 145 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYE--------------KVHSIYNRLLAIEDIDPTLVYIQYMKFAR 145 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHTSSSSCTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHH--------------HHHHHHHHHHhccccCccHHHHHHHHHHH
Confidence 3899999999999 69999999999999999988765 899999999999998887 8888888888
Q ss_pred HhhchhhHHHHH-------------------------hcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHH
Q psy9159 125 ANGQFQSLKEKI-------------------------KCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERK 179 (259)
Q Consensus 125 ~~~~~~~~~~~~-------------------------~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~ 179 (259)
..|++..+...+ +....+...|+++++++|+++.+|..+|.++..
T Consensus 146 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~---------- 215 (308)
T 2ond_A 146 RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH---------- 215 (308)
T ss_dssp HHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT----------
T ss_pred HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----------
Confidence 777765321100 111233344444444444444444444444332
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHHHhh---CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccch
Q psy9159 180 IAVLIVSDLDEPTAEDAIANCLKAEEL---APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESH 249 (259)
Q Consensus 180 ~~~~~~~~~~~g~~~eAi~~~~kAi~l---~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~ 249 (259)
.|++++|+..|+++++. +|++....|..++..+...|+.++|...++++++..|++.++.
T Consensus 216 ----------~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~~~~~~ 278 (308)
T 2ond_A 216 ----------LNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREEYEGK 278 (308)
T ss_dssp ----------TCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTTSSC
T ss_pred ----------CCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccccccc
Confidence 48999999999999995 6633577899999999999999999999999999999877654
No 68
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.76 E-value=9.3e-18 Score=151.14 Aligned_cols=166 Identities=17% Similarity=0.077 Sum_probs=152.9
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN 112 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~ 112 (259)
..+..++ .. |++++|+..++++++.+|+ +.++..+|.++...|++. +|+..+++++.++|++
T Consensus 242 ~~~~~~~--~~-~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~--------------~A~~~~~~~~~~~~~~ 303 (514)
T 2gw1_A 242 HTGIFKF--LK-NDPLGAHEDIKKAIELFPR-VNSYIYMALIMADRNDST--------------EYYNYFDKALKLDSNN 303 (514)
T ss_dssp HHHHHHH--HS-SCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSSCCT--------------TGGGHHHHHHTTCTTC
T ss_pred HHHHHHH--HC-CCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCCCHH--------------HHHHHHHHHhhcCcCC
Confidence 3444455 55 9999999999999999999 999999999999999886 9999999999999999
Q ss_pred hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCc
Q psy9159 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPT 192 (259)
Q Consensus 113 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 192 (259)
+.++..+|.++...|++. .+...++++++++|+++.++..+|.++... |+
T Consensus 304 ~~~~~~l~~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------------------~~ 353 (514)
T 2gw1_A 304 SSVYYHRGQMNFILQNYD----------QAGKDFDKAKELDPENIFPYIQLACLAYRE--------------------NK 353 (514)
T ss_dssp THHHHHHHHHHHHTTCTT----------HHHHHHHHHHHTCSSCSHHHHHHHHHTTTT--------------------TC
T ss_pred HHHHHHHHHHHHHhCCHH----------HHHHHHHHHHHhChhhHHHHHHHHHHHHHc--------------------CC
Confidence 999999999999999887 567899999999999999999999988764 88
Q ss_pred HHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 193 AEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
+++|+.+|+++++.+| ++..++..+|.++...|++++|++.+++++++.|.+++
T Consensus 354 ~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 407 (514)
T 2gw1_A 354 FDDCETLFSEAKRKFP-EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDG 407 (514)
T ss_dssp HHHHHHHHHHHHHHST-TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHHcc-cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999 77899999999999999999999999999999988765
No 69
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.76 E-value=1.1e-18 Score=151.59 Aligned_cols=152 Identities=14% Similarity=0.058 Sum_probs=138.9
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC------------
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN------------ 112 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~------------ 112 (259)
+++++|++.+++++..+|+++.++..+|.++...|++. +|+..|+++++++|++
T Consensus 127 ~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~--------------~A~~~y~~Al~~~p~~~~~~~~~~~~~~ 192 (336)
T 1p5q_A 127 KSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYK--------------QALLQYKKIVSWLEYESSFSNEEAQKAQ 192 (336)
T ss_dssp EEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHTTTCCCCCSHHHHHHH
T ss_pred eecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHHHhhccccCChHHHHHHH
Confidence 56778888888888899999999999999999999875 9999999999999999
Q ss_pred ---hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCC
Q psy9159 113 ---SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLD 189 (259)
Q Consensus 113 ---~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (259)
..++.++|.++...|++. .|+..++++|+++|+++.+++.+|.++..+
T Consensus 193 ~~~~~~~~nla~~~~~~g~~~----------~A~~~~~~al~~~p~~~~a~~~lg~~~~~~------------------- 243 (336)
T 1p5q_A 193 ALRLASHLNLAMCHLKLQAFS----------AAIESCNKALELDSNNEKGLSRRGEAHLAV------------------- 243 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCcHHHHHHHHHHHHHC-------------------
Confidence 599999999999999987 577999999999999999999999999885
Q ss_pred CCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHH-HHHHHHHhcC
Q psy9159 190 EPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKA-VQWLDKAKAI 241 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA-~~~~~kal~l 241 (259)
|++++|+.+|++|++++| ++..++..+|.++..+|++++| ...|++.+..
T Consensus 244 -g~~~~A~~~~~~al~l~P-~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 244 -NDFELARADFQKVLQLYP-NNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp -TCHHHHHHHHHHHHHHCS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999 7899999999999999999999 5577776643
No 70
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.76 E-value=1e-17 Score=135.38 Aligned_cols=135 Identities=14% Similarity=0.128 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH----------------HHHHHHHh
Q psy9159 63 NDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKW----------------YGICVGAN 126 (259)
Q Consensus 63 ~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~----------------la~~~~~~ 126 (259)
.+++.++..|..+...|++. +|+..++++++++|+++.++++ +|.++...
T Consensus 2 ~~~~~~~~~g~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 67 (208)
T 3urz_A 2 QSVDEMLQKVSAAIEAGQNG--------------QAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKN 67 (208)
T ss_dssp -CHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC
Confidence 36788899999999999875 9999999999999999999999 99999999
Q ss_pred hchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh
Q psy9159 127 GQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL 206 (259)
Q Consensus 127 ~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l 206 (259)
|++. .|...++++++++|+++.+++.+|.++... |++++|+.+|++++++
T Consensus 68 g~~~----------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------------g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 68 RNYD----------KAYLFYKELLQKAPNNVDCLEACAEMQVCR--------------------GQEKDALRMYEKILQL 117 (208)
T ss_dssp TCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH--------------------TCHHHHHHHHHHHHHH
T ss_pred CCHH----------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHc
Confidence 9887 577999999999999999999999999886 8899999999999999
Q ss_pred CCCCcHHhHHHHHHHHHHhCC--HHHHHHHHHHHhcCC
Q psy9159 207 APAPWKENQLLIAKCYIEAGE--YAKAVQWLDKAKAIP 242 (259)
Q Consensus 207 ~P~~~~~~~~~la~~~~~~g~--~~eA~~~~~kal~l~ 242 (259)
+| +++.+++++|.+|...|+ .+.+...+++++..+
T Consensus 118 ~P-~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (208)
T 3urz_A 118 EA-DNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPT 154 (208)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred CC-CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCC
Confidence 99 789999999999987764 556788888886544
No 71
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.75 E-value=9e-17 Score=118.07 Aligned_cols=135 Identities=25% Similarity=0.357 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHH
Q psy9159 66 DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQ 145 (259)
Q Consensus 66 ~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~ 145 (259)
++++.+|.++...|++. +|+..++++++.+|+++.++..+|.++...+++. .+...
T Consensus 2 ~~~~~l~~~~~~~~~~~--------------~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----------~A~~~ 57 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYD--------------EAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYD----------EAIEY 57 (136)
T ss_dssp HHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH----------HHHHH
T ss_pred cHHHHHHHHHHHcCcHH--------------HHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHH----------HHHHH
Confidence 56788999999988865 9999999999999999999999999999888876 56788
Q ss_pred HHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHh
Q psy9159 146 MNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEA 225 (259)
Q Consensus 146 ~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~ 225 (259)
++++++++|+++.+++.+|.++... |++++|+.+++++++..| ....++..+|.++...
T Consensus 58 ~~~~~~~~~~~~~~~~~l~~~~~~~--------------------~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~ 116 (136)
T 2fo7_A 58 YQKALELDPRSAEAWYNLGNAYYKQ--------------------GDYDEAIEYYQKALELDP-RSAEAWYNLGNAYYKQ 116 (136)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTT--------------------TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCchHHHHHHHHHHHHh--------------------cCHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHH
Confidence 9999999999999999999988764 889999999999999999 6788999999999999
Q ss_pred CCHHHHHHHHHHHhcCCCCC
Q psy9159 226 GEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 226 g~~~eA~~~~~kal~l~p~~ 245 (259)
|++++|++.++++++++|.+
T Consensus 117 ~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 117 GDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TCHHHHHHHHHHHHHHSTTC
T ss_pred ccHHHHHHHHHHHHccCCCC
Confidence 99999999999999998863
No 72
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.75 E-value=9.3e-18 Score=127.34 Aligned_cols=131 Identities=11% Similarity=0.033 Sum_probs=113.4
Q ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhh
Q psy9159 52 NLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQS 131 (259)
Q Consensus 52 ~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~ 131 (259)
..+++++..+|+++++++.+|.++...|++. +|+..+++++.++|+++.+|..+|.++...|++.
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~- 69 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWD--------------DAQKIFQALCMLDHYDARYFLGLGACRQSLGLYE- 69 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHH--------------HHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHH-
Confidence 4678889999999999999999999999875 9999999999999999999999999999999887
Q ss_pred HHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCc
Q psy9159 132 LKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPW 211 (259)
Q Consensus 132 ~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~ 211 (259)
.|...++++++++|+++.+++.+|.++... |++++|+.+|+++++++| ++
T Consensus 70 ---------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------------g~~~~A~~~~~~al~~~p-~~ 119 (142)
T 2xcb_A 70 ---------QALQSYSYGALMDINEPRFPFHAAECHLQL--------------------GDLDGAESGFYSARALAA-AQ 119 (142)
T ss_dssp ---------HHHHHHHHHHHHCTTCTHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHH-TC
T ss_pred ---------HHHHHHHHHHhcCCCCcHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCC-CC
Confidence 577999999999999999999999999875 889999999999999999 66
Q ss_pred HHhHHHHHHHHHHhCC
Q psy9159 212 KENQLLIAKCYIEAGE 227 (259)
Q Consensus 212 ~~~~~~la~~~~~~g~ 227 (259)
+.....+..+...++.
T Consensus 120 ~~~~~~~~~~~~~l~~ 135 (142)
T 2xcb_A 120 PAHEALAARAGAMLEA 135 (142)
T ss_dssp GGGHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHH
Confidence 6665555555544443
No 73
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.75 E-value=1e-16 Score=131.71 Aligned_cols=164 Identities=14% Similarity=0.103 Sum_probs=140.1
Q ss_pred hcCCCC-HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHh
Q psy9159 59 NKQPND-PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIK 137 (259)
Q Consensus 59 ~~~p~~-~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~ 137 (259)
..+|.+ +.+++.+|.++...|++. +|+..++++++.+|+++.++..+|.++...|++.
T Consensus 30 ~~~~~~~~~~~~~~a~~~~~~~~~~--------------~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~------- 88 (252)
T 2ho1_A 30 DKGRDEARDAYIQLGLGYLQRGNTE--------------QAKVPLRKALEIDPSSADAHAALAVVFQTEMEPK------- 88 (252)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCTG--------------GGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-------
T ss_pred ccchHHHHHHHHHHHHHHHHcCChH--------------HHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHH-------
Confidence 346666 889999999999999886 9999999999999999999999999999999887
Q ss_pred cHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHh--cCC--------------CCCcHHHHHHHHH
Q psy9159 138 CGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIV--SDL--------------DEPTAEDAIANCL 201 (259)
Q Consensus 138 ~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~--------------~~g~~~eAi~~~~ 201 (259)
.+.+.++++++++|+++.++..+|.++...++.....+.+..++. ..+ ..|++++|+.+|+
T Consensus 89 ---~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 165 (252)
T 2ho1_A 89 ---LADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFE 165 (252)
T ss_dssp ---HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 567899999999999999999999999988776544333333222 111 1699999999999
Q ss_pred HHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 202 KAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 202 kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
++++++| .+..++..+|.++...|++++|++.++++++..|.+.+
T Consensus 166 ~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 210 (252)
T 2ho1_A 166 KSLRLNR-NQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNAR 210 (252)
T ss_dssp HHHHHCS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHH
T ss_pred HHHhcCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHH
Confidence 9999999 77899999999999999999999999999999987654
No 74
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.73 E-value=3.9e-17 Score=127.85 Aligned_cols=131 Identities=15% Similarity=0.126 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHH-HHHh
Q psy9159 92 EKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRY-QYEI 170 (259)
Q Consensus 92 ~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~-~~~~ 170 (259)
.+.+++|+..++++++.+|+++.++..+|.++...|++. .+...++++++++|+++.++..+|.+ +...
T Consensus 23 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~la~~l~~~~ 92 (177)
T 2e2e_A 23 QQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYS----------NSLLAYRQALQLRGENAELYAALATVLYYQA 92 (177)
T ss_dssp ----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc
Confidence 344569999999999999999999999999999999887 56789999999999999999999998 5553
Q ss_pred hccchHHHHHHHHHhcCCCCCcH--HHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 171 SKLSFFERKIAVLIVSDLDEPTA--EDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~g~~--~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
|++ ++|+.+|+++++++| ++..+++.+|.++...|++++|+..++++++++|.+++-
T Consensus 93 --------------------~~~~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 93 --------------------SQHMTAQTRAMIDKALALDS-NEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp --------------------TTCCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred --------------------CCcchHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 778 999999999999999 778999999999999999999999999999999998765
Q ss_pred hhhhh
Q psy9159 249 HDLST 253 (259)
Q Consensus 249 ~~~~~ 253 (259)
..+..
T Consensus 152 ~~~~~ 156 (177)
T 2e2e_A 152 TQLVE 156 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 75
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=2.4e-16 Score=146.02 Aligned_cols=168 Identities=8% Similarity=0.017 Sum_probs=148.9
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
..-++|++.+.+++..+|++..+|+..+.++..+|+.. +.+.....++++++.+.++++.+|++..+|.+.++++.
T Consensus 43 ~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~----~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~ 118 (567)
T 1dce_A 43 ELDESVLELTSQILGANPDFATLWNCRREVLQHLETEK----SPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118 (567)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTS----CHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhccccc----chhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45578899999999999999999999999999988632 23445666789999999999999999999999999999
Q ss_pred Hhhc--hhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCC-cHHHHHHHHH
Q psy9159 125 ANGQ--FQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEP-TAEDAIANCL 201 (259)
Q Consensus 125 ~~~~--~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~eAi~~~~ 201 (259)
.++. +. ++.+.+++++++||.|..+|..+|.+.... | .+++++++++
T Consensus 119 ~l~~~~~~----------~el~~~~k~l~~d~~N~~aW~~R~~~l~~l--------------------~~~~~~el~~~~ 168 (567)
T 1dce_A 119 RLPEPNWA----------RELELCARFLEADERNFHCWDYRRFVAAQA--------------------AVAPAEELAFTD 168 (567)
T ss_dssp TCSSCCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------CCCHHHHHHHHH
T ss_pred HcccccHH----------HHHHHHHHHHhhccccccHHHHHHHHHHHc--------------------CCChHHHHHHHH
Confidence 9883 34 467899999999999999999999887764 5 7899999999
Q ss_pred HHHhhCCCCcHHhHHHHHHHHHHh--------------CCHHHHHHHHHHHhcCCCCCcc
Q psy9159 202 KAEELAPAPWKENQLLIAKCYIEA--------------GEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 202 kAi~l~P~~~~~~~~~la~~~~~~--------------g~~~eA~~~~~kal~l~p~~~~ 247 (259)
++++.+| .+..+|.+++.++..+ +++++|++++++|+.++|++..
T Consensus 169 ~~I~~~p-~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~s 227 (567)
T 1dce_A 169 SLITRNF-SNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQS 227 (567)
T ss_dssp TTTTTTC-CCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSH
T ss_pred HHHHHCC-CCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCcc
Confidence 9999999 7899999999999986 6689999999999999998764
No 76
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.72 E-value=4e-17 Score=127.76 Aligned_cols=136 Identities=13% Similarity=0.128 Sum_probs=116.8
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA 109 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~ 109 (259)
..+..+..++ .. |++++|+..++++++.+|+++.+++.+|.+|...|++. +|+.+++++++++
T Consensus 12 ~~~~~~~~~~--~~-~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~--------------~A~~~~~~al~~~ 74 (177)
T 2e2e_A 12 RQRDPLHQFA--SQ-QNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYS--------------NSLLAYRQALQLR 74 (177)
T ss_dssp CSSTTTCCCC--------CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHH
T ss_pred HHhhhhhhhh--hc-cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHcC
Confidence 3444555555 56 99999999999999999999999999999999999875 9999999999999
Q ss_pred CCChHHHHHHHHH-HHHhhch--hhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhc
Q psy9159 110 PNNSNTQKWYGIC-VGANGQF--QSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVS 186 (259)
Q Consensus 110 P~~~~~~~~la~~-~~~~~~~--~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~ 186 (259)
|+++.++..+|.+ +...|++ . .+...++++++++|+++.+++.+|.++...
T Consensus 75 p~~~~~~~~la~~l~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~la~~~~~~---------------- 128 (177)
T 2e2e_A 75 GENAELYAALATVLYYQASQHMTA----------QTRAMIDKALALDSNEITALMLLASDAFMQ---------------- 128 (177)
T ss_dssp CSCHHHHHHHHHHHHHHTTTCCCH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----------------
T ss_pred CCCHHHHHHHHHHHHHhcCCcchH----------HHHHHHHHHHHhCCCcHHHHHHHHHHHHHc----------------
Confidence 9999999999999 6677776 5 567899999999999999999999999875
Q ss_pred CCCCCcHHHHHHHHHHHHhhCCCCcHH
Q psy9159 187 DLDEPTAEDAIANCLKAEELAPAPWKE 213 (259)
Q Consensus 187 ~~~~g~~~eAi~~~~kAi~l~P~~~~~ 213 (259)
|++++|+.+|+++++++| .+..
T Consensus 129 ----g~~~~A~~~~~~al~~~p-~~~~ 150 (177)
T 2e2e_A 129 ----ANYAQAIELWQKVMDLNS-PRIN 150 (177)
T ss_dssp ----TCHHHHHHHHHHHHHTCC-TTSC
T ss_pred ----ccHHHHHHHHHHHHhhCC-CCcc
Confidence 889999999999999999 5443
No 77
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.71 E-value=1.7e-16 Score=123.24 Aligned_cols=139 Identities=10% Similarity=0.079 Sum_probs=127.8
Q ss_pred CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHH
Q psy9159 64 DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFR 143 (259)
Q Consensus 64 ~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~ 143 (259)
...+++.+|.++...|++. +|+..++++++.+|+++.++..+|.++...|++. .+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~A~ 62 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYS--------------QAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVD----------RGT 62 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHH--------------HHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHH----------HHH
T ss_pred hhHHHHHHHHHHHHhcCHH--------------HHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHH----------HHH
Confidence 4677888999999988875 9999999999999999999999999999998887 567
Q ss_pred HHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHH
Q psy9159 144 DQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYI 223 (259)
Q Consensus 144 ~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~ 223 (259)
..++++++++|+++.++..+|.++... |++++|+.+++++++.+| .+..++..+|.++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~--------------------~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~ 121 (186)
T 3as5_A 63 ELLERSLADAPDNVKVATVLGLTYVQV--------------------QKYDLAVPLLIKVAEANP-INFNVRFRLGVALD 121 (186)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHH--------------------TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHh--------------------cCHHHHHHHHHHHHhcCc-HhHHHHHHHHHHHH
Confidence 899999999999999999999998875 789999999999999999 77899999999999
Q ss_pred HhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 224 EAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 224 ~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
..|++++|++.++++++..|.++.
T Consensus 122 ~~~~~~~A~~~~~~~~~~~~~~~~ 145 (186)
T 3as5_A 122 NLGRFDEAIDSFKIALGLRPNEGK 145 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HcCcHHHHHHHHHHHHhcCccchH
Confidence 999999999999999999987753
No 78
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.8e-16 Score=129.79 Aligned_cols=159 Identities=12% Similarity=0.019 Sum_probs=132.7
Q ss_pred CCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHH
Q psy9159 63 NDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVF 142 (259)
Q Consensus 63 ~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a 142 (259)
+.++++..+|.++...|++. +|+..++++++.+ +++.++..+|.++...|++. .+
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~--------------~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~----------~A 57 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFD--------------EAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYE----------TA 57 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHH----------HH
T ss_pred hHHHHHHHHHHHHHHhccHH--------------HHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHH----------HH
Confidence 45788999999999999875 9999999999999 99999999999999999887 56
Q ss_pred HHHHHHHHccCCCC-------hhHHHHHHHHHHHhhccchHHHHHHHHHh--------------------------cC--
Q psy9159 143 RDQMNKAIQMAPKD-------FTLYSLKGRYQYEISKLSFFERKIAVLIV--------------------------SD-- 187 (259)
Q Consensus 143 ~~~~~kAl~l~P~~-------~~~~~~lG~~~~~~~~~~~~~~~~~~~~~--------------------------~~-- 187 (259)
...++++++++|++ +.++..+|.++...++.......+..++- ..
T Consensus 58 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 137 (258)
T 3uq3_A 58 ISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE 137 (258)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc
Confidence 78889999999987 78999999999888765422211111111 00
Q ss_pred ------------CCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 188 ------------LDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 188 ------------~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
...|++++|+.+|+++++++| .+..++..+|.++...|++++|++.++++++++|.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 208 (258)
T 3uq3_A 138 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP-EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVR 208 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc-ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHH
Confidence 126999999999999999999 77899999999999999999999999999999988764
No 79
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.71 E-value=2.4e-16 Score=133.76 Aligned_cols=154 Identities=8% Similarity=-0.046 Sum_probs=132.5
Q ss_pred CHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q psy9159 46 DKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGA 125 (259)
Q Consensus 46 ~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~ 125 (259)
..+.....+...+ |++++.++.+|..+...|++. +|+..++++++++|+++.++..+|.++..
T Consensus 101 ~~~~l~~~l~~~l---p~~~~~~~~~a~~~~~~g~~~--------------~A~~~~~~al~~~P~~~~a~~~la~~~~~ 163 (287)
T 3qou_A 101 PEEAIRALLDXVL---PREEELXAQQAMQLMQESNYT--------------DALPLLXDAWQLSNQNGEIGLLLAETLIA 163 (287)
T ss_dssp CHHHHHHHHHHHS---CCHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHc---CCchhhHHHHHHHHHhCCCHH--------------HHHHHHHHHHHhCCcchhHHHHHHHHHHH
Confidence 3444444555543 999999999999999999875 99999999999999999999999999999
Q ss_pred hhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHh
Q psy9159 126 NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEE 205 (259)
Q Consensus 126 ~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~ 205 (259)
.|++. +|...+++++.++|+....+...+..+... ++.++|+..|+++++
T Consensus 164 ~g~~~----------~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~--------------------~~~~~a~~~l~~al~ 213 (287)
T 3qou_A 164 LNRSE----------DAEAVLXTIPLQDQDTRYQGLVAQIELLXQ--------------------AADTPEIQQLQQQVA 213 (287)
T ss_dssp TTCHH----------HHHHHHTTSCGGGCSHHHHHHHHHHHHHHH--------------------HTSCHHHHHHHHHHH
T ss_pred CCCHH----------HHHHHHHhCchhhcchHHHHHHHHHHHHhh--------------------cccCccHHHHHHHHh
Confidence 99987 567899999999997665556565555443 557889999999999
Q ss_pred hCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 206 LAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 206 l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
++| ++..+++++|.+|...|++++|++.|+++++.+|++.+
T Consensus 214 ~~P-~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~ 254 (287)
T 3qou_A 214 ENP-EDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAAD 254 (287)
T ss_dssp HCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGG
T ss_pred cCC-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccc
Confidence 999 78999999999999999999999999999999998743
No 80
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=3e-16 Score=115.98 Aligned_cols=118 Identities=15% Similarity=0.072 Sum_probs=97.3
Q ss_pred CCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHH
Q psy9159 62 PNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVV 141 (259)
Q Consensus 62 p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~ 141 (259)
|.+++.++.+|..+...|++. +|+..++++++++|+++.++..+|.++...|++. .
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~--------------~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~----------~ 56 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWP--------------NAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFP----------E 56 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH----------H
T ss_pred CchHHHHHHHHHHHHHhcCHH--------------HHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHH----------H
Confidence 455778888888888888765 8888899999999988888888888888888876 4
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhC------CCCcHHhH
Q psy9159 142 FRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELA------PAPWKENQ 215 (259)
Q Consensus 142 a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~------P~~~~~~~ 215 (259)
+...++++++++|+++.+|+.+|.++... |++++|+.+|+++++++ | ++..++
T Consensus 57 A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------------~~~~~A~~~~~~al~~~p~~~~~p-~~~~~~ 115 (126)
T 3upv_A 57 AIADCNKAIEKDPNFVRAYIRKATAQIAV--------------------KEYASALETLDAARTKDAEVNNGS-SAREID 115 (126)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHHHHHTTT-THHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHH--------------------hCHHHHHHHHHHHHHhCcccCCch-hHHHHH
Confidence 67888888888898888888888888774 77888899999998888 8 667777
Q ss_pred HHHHHHHHH
Q psy9159 216 LLIAKCYIE 224 (259)
Q Consensus 216 ~~la~~~~~ 224 (259)
..++.+...
T Consensus 116 ~~l~~~~~~ 124 (126)
T 3upv_A 116 QLYYKASQQ 124 (126)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777777654
No 81
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.70 E-value=3.7e-17 Score=128.41 Aligned_cols=142 Identities=11% Similarity=0.063 Sum_probs=119.7
Q ss_pred CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHH
Q psy9159 61 QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGV 140 (259)
Q Consensus 61 ~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~ 140 (259)
+|...+.++.+|.++...|++. +|+..++++++++|+++.++..+|.++...|++.
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~~~--------------~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~---------- 57 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGEHA--------------QALNVIQTLSDELQSRGDVKLAKADCLLETKQFE---------- 57 (176)
T ss_dssp ----CTTHHHHHHHHHHTTCHH--------------HHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHH----------
T ss_pred CCCHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHH----------
Confidence 4566677889999999999875 9999999999999999999999999999999887
Q ss_pred HHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHH
Q psy9159 141 VFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAK 220 (259)
Q Consensus 141 ~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~ 220 (259)
.+...++++++++| ++.++..+|.+..... +...+|+.+++++++++| +++.+++.+|.
T Consensus 58 ~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~-------------------~~~~~a~~~~~~al~~~P-~~~~~~~~la~ 116 (176)
T 2r5s_A 58 LAQELLATIPLEYQ-DNSYKSLIAKLELHQQ-------------------AAESPELKRLEQELAANP-DNFELACELAV 116 (176)
T ss_dssp HHHHHHTTCCGGGC-CHHHHHHHHHHHHHHH-------------------HTSCHHHHHHHHHHHHST-TCHHHHHHHHH
T ss_pred HHHHHHHHhhhccC-ChHHHHHHHHHHHHhh-------------------cccchHHHHHHHHHHhCC-CCHHHHHHHHH
Confidence 56789999999999 8877776665533210 123458999999999999 78999999999
Q ss_pred HHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 221 CYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 221 ~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
++...|++++|+..|+++++++|...+
T Consensus 117 ~~~~~g~~~~A~~~~~~~l~~~p~~~~ 143 (176)
T 2r5s_A 117 QYNQVGRDEEALELLWNILKVNLGAQD 143 (176)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTTTT
T ss_pred HHHHcccHHHHHHHHHHHHHhCcccCh
Confidence 999999999999999999999997644
No 82
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.70 E-value=1.5e-16 Score=131.78 Aligned_cols=163 Identities=13% Similarity=0.051 Sum_probs=138.5
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhc--------CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHH
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNK--------QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAK 103 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ 103 (259)
...+..++ .. |++++|+..+++++.. +|..+.++..+|.+|...|++. +|+.+++
T Consensus 47 ~~l~~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~ 109 (283)
T 3edt_B 47 NILALVYR--DQ-NKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYK--------------EAEPLCK 109 (283)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHH--------------HHHHHHH
T ss_pred HHHHHHHH--Hc-ccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHH--------------HHHHHHH
Confidence 34454555 56 9999999999999976 5777889999999999999875 8888888
Q ss_pred HHHHh--------CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHcc--------CCCChhHHHHHHHHH
Q psy9159 104 KAMEL--------APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQM--------APKDFTLYSLKGRYQ 167 (259)
Q Consensus 104 kal~~--------~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l--------~P~~~~~~~~lG~~~ 167 (259)
+++++ +|....++..+|.++...|++. .|...+++++++ +|....++..+|.++
T Consensus 110 ~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 179 (283)
T 3edt_B 110 RALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAE----------EVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCY 179 (283)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH----------HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 88888 5778888999999999999887 467888888888 778888999999999
Q ss_pred HHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh-----------------------------------------
Q psy9159 168 YEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL----------------------------------------- 206 (259)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l----------------------------------------- 206 (259)
... |++++|+.+|++++++
T Consensus 180 ~~~--------------------g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T 3edt_B 180 LKQ--------------------GKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGS 239 (283)
T ss_dssp HHH--------------------TCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC---------
T ss_pred HHc--------------------CCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 886 7789999999999886
Q ss_pred --------CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 207 --------APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 207 --------~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
.| ....++..+|.+|..+|++++|++++++++++.
T Consensus 240 ~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 240 WYKACKVDSP-TVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp ---CCCCCCH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 24 445678999999999999999999999999864
No 83
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.70 E-value=5.7e-16 Score=124.22 Aligned_cols=135 Identities=16% Similarity=0.059 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHH
Q psy9159 65 PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRD 144 (259)
Q Consensus 65 ~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~ 144 (259)
...++.+|.++...|++. +|+..+++++ +| ++.++..+|.++...|++. .|..
T Consensus 6 ~~~~~~~g~~~~~~~~~~--------------~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~----------~A~~ 58 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWK--------------GALDAFSAVQ--DP-HSRICFNIGCMYTILKNMT----------EAEK 58 (213)
T ss_dssp HHHHHHHHHHHHHTTCHH--------------HHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHH----------HHHH
T ss_pred HHHHHHHHHHHHHhCCHH--------------HHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHH----------HHHH
Confidence 345678899999988875 9999999995 45 7899999999999999887 5678
Q ss_pred HHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcH------------
Q psy9159 145 QMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWK------------ 212 (259)
Q Consensus 145 ~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~------------ 212 (259)
.++++++++|+++.+++.+|.++... |++++|+.+|++++++.| .+.
T Consensus 59 ~~~~al~~~~~~~~~~~~lg~~~~~~--------------------~~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~~ 117 (213)
T 1hh8_A 59 AFTRSINRDKHLAVAYFQRGMLYYQT--------------------EKYDLAIKDLKEALIQLR-GNQLIDYKILGLQFK 117 (213)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHTTT-TCSEEECGGGTBCCE
T ss_pred HHHHHHHhCccchHHHHHHHHHHHHc--------------------ccHHHHHHHHHHHHHhCC-CccHHHHHHhccccC
Confidence 99999999999999999999999875 889999999999999988 545
Q ss_pred ----HhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 213 ----ENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 213 ----~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
.+++++|.++..+|++++|++.++++++++|.+..
T Consensus 118 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 118 LFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp EEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred ccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 88999999999999999999999999999997643
No 84
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.70 E-value=7e-16 Score=118.32 Aligned_cols=134 Identities=13% Similarity=0.151 Sum_probs=119.0
Q ss_pred CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHH
Q psy9159 64 DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFR 143 (259)
Q Consensus 64 ~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~ 143 (259)
.+..++.+|.++...|++. +|+..++++++++|+++.++..+|.++...|++. .+.
T Consensus 12 ~~~~~~~~a~~~~~~~~~~--------------~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~----------~A~ 67 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYE--------------NAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYG----------YAL 67 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH----------HHH
T ss_pred HHHHHHHHHHHHHHccCHH--------------HHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHH----------HHH
Confidence 3577888999999888875 9999999999999999999999999999999887 567
Q ss_pred HHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHH--HH
Q psy9159 144 DQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIA--KC 221 (259)
Q Consensus 144 ~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la--~~ 221 (259)
..++++++++|+++.+++.+|.++... |++++|+.+|+++++++| .+..++..++ ..
T Consensus 68 ~~~~~a~~~~~~~~~~~~~~a~~~~~~--------------------~~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~ 126 (166)
T 1a17_A 68 GDATRAIELDKKYIKGYYRRAASNMAL--------------------GKFRAALRDYETVVKVKP-HDKDAKMKYQECNK 126 (166)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHh--------------------ccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 899999999999999999999998875 889999999999999999 6777775555 44
Q ss_pred HHHhCCHHHHHHHHHHHhcCC
Q psy9159 222 YIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 222 ~~~~g~~~eA~~~~~kal~l~ 242 (259)
+...|++++|++.+.++..+.
T Consensus 127 ~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 127 IVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccchHHHh
Confidence 888999999999999987654
No 85
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.70 E-value=1.9e-15 Score=130.51 Aligned_cols=170 Identities=8% Similarity=-0.002 Sum_probs=147.4
Q ss_pred CCHH-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q psy9159 45 DDKA-KAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICV 123 (259)
Q Consensus 45 ~~~~-~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~ 123 (259)
|.+. +|++.+.+++..+|++..+|+..+.+...++... +.+.....+++++..+.+++..+|.+..+|.+.++++
T Consensus 43 ~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~----~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL 118 (331)
T 3dss_A 43 GELDESVLELTSQILGANPDFATLWNCRREVLQHLETEK----SPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 118 (331)
T ss_dssp TCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccc----cchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 5554 8999999999999999999999999999887632 2334566688999999999999999999999999999
Q ss_pred HHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCc-HHHHHHHHHH
Q psy9159 124 GANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPT-AEDAIANCLK 202 (259)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~eAi~~~~k 202 (259)
..++... ...+...++++++++|.|..+|+..|.+.... |+ ++++++++++
T Consensus 119 ~~l~~~~--------~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l--------------------~~~~~eel~~~~~ 170 (331)
T 3dss_A 119 SRLPEPN--------WARELELCARFLEADERNFHCWDYRRFVAAQA--------------------AVAPAEELAFTDS 170 (331)
T ss_dssp HHCSSCC--------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCCHHHHHHHHHH
T ss_pred hccCccc--------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh--------------------CcCHHHHHHHHHH
Confidence 9887421 11457889999999999999999999877664 55 6999999999
Q ss_pred HHhhCCCCcHHhHHHHHHHHHHh--------------CCHHHHHHHHHHHhcCCCCCcc
Q psy9159 203 AEELAPAPWKENQLLIAKCYIEA--------------GEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 203 Ai~l~P~~~~~~~~~la~~~~~~--------------g~~~eA~~~~~kal~l~p~~~~ 247 (259)
+++.+| .+..+|.+++.++..+ +.++++++++++++.++|+|..
T Consensus 171 ~I~~~p-~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~S 228 (331)
T 3dss_A 171 LITRNF-SNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQS 228 (331)
T ss_dssp HHHHCS-CCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHCC-CCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHH
Confidence 999999 7899999999999988 5689999999999999999865
No 86
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.70 E-value=4.5e-16 Score=119.97 Aligned_cols=113 Identities=13% Similarity=0.010 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHH
Q psy9159 89 EASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQY 168 (259)
Q Consensus 89 ~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~ 168 (259)
.++.+.+++|+..++++++++|+++++|.++|.++..++++......++...+|+..|++||+++|+++.+|+.+|.+|.
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 46788899999999999999999999999999999999999887777777889999999999999999999999999998
Q ss_pred Hhhcc-chHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcH
Q psy9159 169 EISKL-SFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWK 212 (259)
Q Consensus 169 ~~~~~-~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~ 212 (259)
+.+.+ +....+ .|++++|+.+|++|++++| ++.
T Consensus 92 ~lg~l~P~~~~a----------~g~~~eA~~~~~kAl~l~P-~~~ 125 (158)
T 1zu2_A 92 SFAFLTPDETEA----------KHNFDLATQFFQQAVDEQP-DNT 125 (158)
T ss_dssp HHHHHCCCHHHH----------HHHHHHHHHHHHHHHHHCT-TCH
T ss_pred HhcccCcchhhh----------hccHHHHHHHHHHHHHhCC-CCH
Confidence 87532 000000 1689999999999999999 554
No 87
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.69 E-value=2.9e-15 Score=125.05 Aligned_cols=176 Identities=14% Similarity=0.067 Sum_probs=130.7
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH----hhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHC----LYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~----~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
+..+..++ .. |++++|+..|+++++ |+++.+++.+|.+|.. .+++. +|+.+++++++
T Consensus 10 ~~lg~~~~--~~-~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~--------------~A~~~~~~a~~ 70 (273)
T 1ouv_A 10 VGLGAKSY--KE-KDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLK--------------KAASFYAKACD 70 (273)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHH--------------HHHHHHHHHHH
T ss_pred HHHHHHHH--hC-CCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHH--------------HHHHHHHHHHH
Confidence 34455555 45 888888888888887 7788888888888887 66654 88888888887
Q ss_pred hCCCChHHHHHHHHHHHH----hhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH----hhccc----h
Q psy9159 108 LAPNNSNTQKWYGICVGA----NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE----ISKLS----F 175 (259)
Q Consensus 108 ~~P~~~~~~~~la~~~~~----~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~----~~~~~----~ 175 (259)
++ ++.++..+|.++.. .+++. ++...++++++++ ++.+++.+|.++.. .++.+ +
T Consensus 71 ~~--~~~a~~~lg~~~~~g~~~~~~~~----------~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~ 136 (273)
T 1ouv_A 71 LN--YSNGCHLLGNLYYSGQGVSQNTN----------KALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEY 136 (273)
T ss_dssp TT--CHHHHHHHHHHHHHTSSSCCCHH----------HHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred CC--CHHHHHHHHHHHhCCCCcccCHH----------HHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHH
Confidence 75 77888888888776 66555 4567777777763 77788888887776 54432 2
Q ss_pred HHHHHH-----------HHHh-cCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHH----hCCHHHHHHHHHHHh
Q psy9159 176 FERKIA-----------VLIV-SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIE----AGEYAKAVQWLDKAK 239 (259)
Q Consensus 176 ~~~~~~-----------~~~~-~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~----~g~~~eA~~~~~kal 239 (259)
+.+++. ..+. +....+++++|+.+|+++++.++ +.++..+|.+|.. .+++++|+++|++++
T Consensus 137 ~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~---~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~ 213 (273)
T 1ouv_A 137 FTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD---SPGCFNAGNMYHHGEGATKNFKEALARYSKAC 213 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Confidence 333221 1111 11125899999999999999854 6789999999999 999999999999999
Q ss_pred cCCC
Q psy9159 240 AIPV 243 (259)
Q Consensus 240 ~l~p 243 (259)
+.+|
T Consensus 214 ~~~~ 217 (273)
T 1ouv_A 214 ELEN 217 (273)
T ss_dssp HTTC
T ss_pred hCCC
Confidence 9875
No 88
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.69 E-value=6.2e-16 Score=126.19 Aligned_cols=162 Identities=15% Similarity=0.113 Sum_probs=128.8
Q ss_pred CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHhhchhhHHHHHhcHH
Q psy9159 64 DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS---NTQKWYGICVGANGQFQSLKEKIKCGV 140 (259)
Q Consensus 64 ~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~---~~~~~la~~~~~~~~~~~~~~~~~~~~ 140 (259)
++++++.+|..+...|++. +|+..++++++..|+++ .+++++|.++...|++.
T Consensus 3 ~~~~~~~~a~~~~~~g~~~--------------~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~---------- 58 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWR--------------QAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLP---------- 58 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHH----------
T ss_pred CHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHH----------
Confidence 5788999999999999875 99999999999999875 68999999999999987
Q ss_pred HHHHHHHHHHccCCCChh---HHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhH--
Q psy9159 141 VFRDQMNKAIQMAPKDFT---LYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQ-- 215 (259)
Q Consensus 141 ~a~~~~~kAl~l~P~~~~---~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~-- 215 (259)
.|+..++++++++|+++. +++.+|.+++..+.. .+.. ....-......|++++|+..|+++++..| +...++
T Consensus 59 ~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~A~~~~~~~l~~~P-~~~~a~~a 135 (225)
T 2yhc_A 59 LAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS-ALQG-FFGVDRSDRDPQQARAAFSDFSKLVRGYP-NSQYTTDA 135 (225)
T ss_dssp HHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC----------------CCHHHHHHHHHHHHHHTTCT-TCTTHHHH
T ss_pred HHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhh-hhhh-hhccchhhcCcHHHHHHHHHHHHHHHHCc-CChhHHHH
Confidence 567899999999999986 799999998775421 0000 00000000124789999999999999999 555443
Q ss_pred ---------------HHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhhh
Q psy9159 216 ---------------LLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 216 ---------------~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~ 252 (259)
+.+|.+|...|++++|+..|+++++..|+++.....+
T Consensus 136 ~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 187 (225)
T 2yhc_A 136 TKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDAL 187 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHH
Confidence 6789999999999999999999999999987554443
No 89
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.69 E-value=6.3e-16 Score=132.52 Aligned_cols=160 Identities=7% Similarity=-0.026 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhh--chhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLY--DIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGIC 122 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g--~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~ 122 (259)
+..++|+..+.+++..+|++..+|+..+.++..+| .+ ++++..+.++|.++|++..+|.+.+.+
T Consensus 47 e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~--------------~eeL~~~~~~L~~nPk~y~aW~~R~~i 112 (306)
T 3dra_A 47 EYSERALHITELGINELASHYTIWIYRFNILKNLPNRNL--------------YDELDWCEEIALDNEKNYQIWNYRQLI 112 (306)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCH--------------HHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccH--------------HHHHHHHHHHHHHCcccHHHHHHHHHH
Confidence 45579999999999999999999999999999988 54 499999999999999999999999999
Q ss_pred H----HHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHH--HH
Q psy9159 123 V----GANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAE--DA 196 (259)
Q Consensus 123 ~----~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--eA 196 (259)
+ ...+.. ......+..++++++++|.|..+|+.+|.+...+ |+++ ++
T Consensus 113 L~~~~~~l~~~-------~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l--------------------~~~~~~~E 165 (306)
T 3dra_A 113 IGQIMELNNND-------FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTF--------------------DLHNDAKE 165 (306)
T ss_dssp HHHHHHHTTTC-------CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCTTCHHH
T ss_pred HHHHHHhcccc-------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh--------------------cccChHHH
Confidence 9 444110 1112567889999999999999999999887665 4444 66
Q ss_pred HHHHHHHHhhCCCCcHHhHHHHHHHHHHhCC------HHHHHHHHHHHhcCCCCCc
Q psy9159 197 IANCLKAEELAPAPWKENQLLIAKCYIEAGE------YAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 197 i~~~~kAi~l~P~~~~~~~~~la~~~~~~g~------~~eA~~~~~kal~l~p~~~ 246 (259)
+++++++++.+| .+..+|.+++.++..+|+ ++++++++++++.++|.|.
T Consensus 166 L~~~~~~i~~d~-~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 166 LSFVDKVIDTDL-KNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp HHHHHHHHHHCT-TCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHHHHHhCC-CCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc
Confidence 777777777777 556667777776666665 6677777777777666654
No 90
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.68 E-value=5.3e-16 Score=113.65 Aligned_cols=125 Identities=17% Similarity=0.147 Sum_probs=114.0
Q ss_pred hcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhc
Q psy9159 59 NKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKC 138 (259)
Q Consensus 59 ~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~ 138 (259)
+.+|.++.+++.+|.++...|++. +|+..++++++.+|+++.++..+|.++...|++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-------- 63 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFE--------------AAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYA-------- 63 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------
T ss_pred hcchhhhHHHHHHHHHHHHccCHH--------------HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchH--------
Confidence 456778899999999999999875 9999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHH
Q psy9159 139 GVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLI 218 (259)
Q Consensus 139 ~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~l 218 (259)
.+...++++++++|+++.+++.+|.++... |++++|+.+|+++++++| ++..++..+
T Consensus 64 --~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~A~~~~~~~~~~~p-~~~~~~~~l 120 (131)
T 2vyi_A 64 --GAVQDCERAICIDPAYSKAYGRMGLALSSL--------------------NKHVEAVAYYKKALELDP-DNETYKSNL 120 (131)
T ss_dssp --HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHST-TCHHHHHHH
T ss_pred --HHHHHHHHHHhcCccCHHHHHHHHHHHHHh--------------------CCHHHHHHHHHHHHhcCc-cchHHHHHH
Confidence 567899999999999999999999998875 889999999999999999 778999999
Q ss_pred HHHHHHhCCH
Q psy9159 219 AKCYIEAGEY 228 (259)
Q Consensus 219 a~~~~~~g~~ 228 (259)
|.++..+|++
T Consensus 121 ~~~~~~~~~~ 130 (131)
T 2vyi_A 121 KIAELKLREA 130 (131)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhcC
Confidence 9999999875
No 91
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.68 E-value=1.8e-16 Score=133.45 Aligned_cols=164 Identities=13% Similarity=0.066 Sum_probs=136.9
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhc--------CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHH
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNK--------QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKK 104 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~k 104 (259)
..+..+. .. |++++|+..+++++.. .|..+.++..+|.+|...|++. +|+.++++
T Consensus 74 ~la~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~ 136 (311)
T 3nf1_A 74 ILALVYR--DQ-NKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYK--------------EAEPLCKR 136 (311)
T ss_dssp HHHHHHH--HT-TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH--------------HHHHHHHH
T ss_pred HHHHHHH--HC-CCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHH--------------HHHHHHHH
Confidence 3344444 45 9999999999999986 4777889999999999999875 88999999
Q ss_pred HHHhC--------CCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHcc--------CCCChhHHHHHHHHHH
Q psy9159 105 AMELA--------PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQM--------APKDFTLYSLKGRYQY 168 (259)
Q Consensus 105 al~~~--------P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l--------~P~~~~~~~~lG~~~~ 168 (259)
++++. |....++..+|.++...|++. .+...+++++++ +|....++..+|.++.
T Consensus 137 a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 206 (311)
T 3nf1_A 137 ALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYE----------EVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYL 206 (311)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH----------HHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 98874 667778888999999888887 466788888887 7778889999999998
Q ss_pred HhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh------------------------------------------
Q psy9159 169 EISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL------------------------------------------ 206 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l------------------------------------------ 206 (259)
.. |++++|+.+|++++++
T Consensus 207 ~~--------------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 266 (311)
T 3nf1_A 207 KQ--------------------GKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGW 266 (311)
T ss_dssp HH--------------------TCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC--
T ss_pred Hc--------------------CCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHH
Confidence 86 6788888888888874
Q ss_pred -------CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 207 -------APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 207 -------~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
+| ....++..+|.+|..+|++++|+++|++++++.|.
T Consensus 267 ~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 267 YKACKVDSP-TVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp -------CH-HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HhhcCCCCc-hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 45 55678999999999999999999999999998765
No 92
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.68 E-value=1.1e-15 Score=112.65 Aligned_cols=123 Identities=17% Similarity=0.180 Sum_probs=112.8
Q ss_pred cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcH
Q psy9159 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCG 139 (259)
Q Consensus 60 ~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~ 139 (259)
..|.++..++.+|.++...|++. +|+..++++++.+|+++.++..+|.++...+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~--------- 67 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQKGDYP--------------QAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQ--------- 67 (133)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCSH--------------HHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHH---------
T ss_pred cCcccHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHH---------
Confidence 46888999999999999999876 9999999999999999999999999999888887
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHH
Q psy9159 140 VVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIA 219 (259)
Q Consensus 140 ~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la 219 (259)
++...++++++++|+++.+++.+|.++... |++++|+.+|+++++++| .+..++..++
T Consensus 68 -~A~~~~~~a~~~~~~~~~~~~~la~~~~~~--------------------~~~~~A~~~~~~~~~~~p-~~~~~~~~l~ 125 (133)
T 2lni_A 68 -LALKDCEECIQLEPTFIKGYTRKAAALEAM--------------------KDYTKAMDVYQKALDLDS-SCKEAADGYQ 125 (133)
T ss_dssp -HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCG-GGTHHHHHHH
T ss_pred -HHHHHHHHHHHhCCCchHHHHHHHHHHHHH--------------------hhHHHHHHHHHHHHHhCC-CchHHHHHHH
Confidence 567899999999999999999999998875 889999999999999999 7788999999
Q ss_pred HHHHHhCC
Q psy9159 220 KCYIEAGE 227 (259)
Q Consensus 220 ~~~~~~g~ 227 (259)
.++..+|+
T Consensus 126 ~~~~~~~~ 133 (133)
T 2lni_A 126 RCMMAQYN 133 (133)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99998875
No 93
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.68 E-value=1.3e-16 Score=132.10 Aligned_cols=154 Identities=16% Similarity=0.198 Sum_probs=130.5
Q ss_pred CCHHHHHHHHHHHhh--------cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh--------
Q psy9159 45 DDKAKAYNLTMELNN--------KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL-------- 108 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~--------~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~-------- 108 (259)
|++++|+..++++++ .+|..+.++..+|.+|...|++. +|+..+++++++
T Consensus 15 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al~~~~~~~~~~ 80 (283)
T 3edt_B 15 VPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYK--------------EAAHLLNDALAIREKTLGKD 80 (283)
T ss_dssp SCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHHTCTT
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHH--------------HHHHHHHHHHHHHHHHcCCc
Confidence 666666666666665 34778999999999999999875 899999999988
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHcc--------CCCChhHHHHHHHHHHHhhccchHHHHH
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQM--------APKDFTLYSLKGRYQYEISKLSFFERKI 180 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l--------~P~~~~~~~~lG~~~~~~~~~~~~~~~~ 180 (259)
.|..+.++..+|.++...|++. .+...+++++++ +|....++..+|.++...
T Consensus 81 ~~~~~~~~~~l~~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~---------- 140 (283)
T 3edt_B 81 HPAVAATLNNLAVLYGKRGKYK----------EAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQ---------- 140 (283)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHH----------HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT----------
T ss_pred chHHHHHHHHHHHHHHHhccHH----------HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHc----------
Confidence 4777888999999999999887 456777888777 577788999999988774
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHHHhh--------CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCC
Q psy9159 181 AVLIVSDLDEPTAEDAIANCLKAEEL--------APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPV 243 (259)
Q Consensus 181 ~~~~~~~~~~g~~~eAi~~~~kAi~l--------~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p 243 (259)
|++++|+.+|++++++ +| ....++..+|.++..+|++++|++.+++++++.|
T Consensus 141 ----------g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 141 ----------GKAEEVEYYYRRALEIYATRLGPDDP-NVAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHSCTTCH-HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 8899999999999999 67 5678899999999999999999999999998743
No 94
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.68 E-value=8.3e-17 Score=128.56 Aligned_cols=153 Identities=12% Similarity=0.044 Sum_probs=125.3
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh-----------
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS----------- 113 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~----------- 113 (259)
|.++++.+.+.......+..+..+..+|.++...|++. +|+..+++++++.|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------------~A~~~~~~al~~~~~~~~~~~~~~~~~~ 83 (198)
T 2fbn_A 18 YFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEIN--------------EAIVKYKEALDFFIHTEEWDDQILLDKK 83 (198)
T ss_dssp ----CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHTTTTCTTCCCHHHHHHH
T ss_pred hhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 77777777777777777778889999999999999875 99999999999999998
Q ss_pred -----HHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 114 -----NTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 114 -----~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
.++.++|.++...|++. .+...++++++++|+++.+++.+|.++...
T Consensus 84 ~~~~~~~~~~la~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~------------------ 135 (198)
T 2fbn_A 84 KNIEISCNLNLATCYNKNKDYP----------KAIDHASKVLKIDKNNVKALYKLGVANMYF------------------ 135 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHHhCcccHHHHHHHHHHHHHc------------------
Confidence 89999999999999887 567899999999999999999999999886
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHH-HHHHHHhcCC
Q psy9159 189 DEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAV-QWLDKAKAIP 242 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~-~~~~kal~l~ 242 (259)
|++++|+.+|+++++++| ++..++..++.++..+++..++. ..+.+.+...
T Consensus 136 --~~~~~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 187 (198)
T 2fbn_A 136 --GFLEEAKENLYKAASLNP-NNLDIRNSYELCVNKLKEARKKDKLTFGGMFDKG 187 (198)
T ss_dssp --TCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHC-------------
T ss_pred --ccHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999999 78999999999999999999887 5566655543
No 95
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.68 E-value=3.8e-15 Score=136.36 Aligned_cols=161 Identities=10% Similarity=-0.032 Sum_probs=136.6
Q ss_pred CCHH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh-HH
Q psy9159 45 DDKA-------KAYNLTMELNN-KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS-NT 115 (259)
Q Consensus 45 ~~~~-------~A~~~~~~~~~-~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~-~~ 115 (259)
|+++ +|+..++++++ ..|+++.+|..+|.++...|++. +|+..|+++++++|+++ .+
T Consensus 293 g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~ 358 (530)
T 2ooe_A 293 GDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYE--------------KVHSIYNRLLAIEDIDPTLV 358 (530)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHSSSSCHHHH
T ss_pred cchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHH--------------HHHHHHHHHhCccccCchHH
Confidence 7776 89999999997 79999999999999999888865 99999999999999986 58
Q ss_pred HHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHH
Q psy9159 116 QKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAED 195 (259)
Q Consensus 116 ~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e 195 (259)
|..++.++.+.|+.. .+...+++|++..|.+...+...+.+.+.. .|++++
T Consensus 359 ~~~~~~~~~~~~~~~----------~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~-------------------~~~~~~ 409 (530)
T 2ooe_A 359 YIQYMKFARRAEGIK----------SGRMIFKKAREDARTRHHVYVTAALMEYYC-------------------SKDKSV 409 (530)
T ss_dssp HHHHHHHHHHHHHHH----------HHHHHHHHHHTCTTCCTHHHHHHHHHHHHH-------------------TCCHHH
T ss_pred HHHHHHHHHHhcCHH----------HHHHHHHHHHhccCCchHHHHHHHHHHHHH-------------------cCChhH
Confidence 888888877776655 567889999999998877777666553321 388999
Q ss_pred HHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccch
Q psy9159 196 AIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESH 249 (259)
Q Consensus 196 Ai~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~ 249 (259)
|+..|+++++..| +++.+|..++.++..+|+.++|...|++++...|.+++..
T Consensus 410 A~~~~e~al~~~p-~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~ 462 (530)
T 2ooe_A 410 AFKIFELGLKKYG-DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKS 462 (530)
T ss_dssp HHHHHHHHHHHHT-TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGC
T ss_pred HHHHHHHHHHHCC-CCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHH
Confidence 9999999999999 7789999999999999999999999999999988877533
No 96
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.68 E-value=2.7e-16 Score=137.82 Aligned_cols=163 Identities=16% Similarity=0.167 Sum_probs=137.4
Q ss_pred HHHHHhhcCCcCCHHHHHHHHHHHhhc------CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 34 EIDRLLYYGKKDDKAKAYNLTMELNNK------QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 34 ~~~~l~~~~~~~~~~~A~~~~~~~~~~------~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
.+..++ .. |++++|+..++++++. .+..+.+++.+|.+|..+|++. +|+.++++|++
T Consensus 109 ~g~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~--------------~A~~~~~~al~ 171 (383)
T 3ulq_A 109 RGMYEL--DQ-REYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTY--------------FSMDYARQAYE 171 (383)
T ss_dssp HHHHHH--HT-TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHH
T ss_pred HHHHHH--Hh-cCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHH
Confidence 555555 56 9999999999999886 2335689999999999999875 99999999999
Q ss_pred hCCCC-------hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh------hHHHHHHHHHHHhhccc
Q psy9159 108 LAPNN-------SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF------TLYSLKGRYQYEISKLS 174 (259)
Q Consensus 108 ~~P~~-------~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~------~~~~~lG~~~~~~~~~~ 174 (259)
+.+.. +.++..+|.++...|++. .|...+++|+++.|... .+++.+|.+|...
T Consensus 172 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~---- 237 (383)
T 3ulq_A 172 IYKEHEAYNIRLLQCHSLFATNFLDLKQYE----------DAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQ---- 237 (383)
T ss_dssp HHHTCSTTHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----
T ss_pred HHHhCccchHHHHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHC----
Confidence 85554 347888899999888887 56788899998866554 4889999998875
Q ss_pred hHHHHHHHHHhcCCCCCcHHHHHHHHHHHHh-----hC-CCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEE-----LA-PAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 175 ~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~-----l~-P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
|++++|+.+|++|++ .+ | ....++.++|.++..+|++++|++++++++++.+.
T Consensus 238 ----------------g~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 238 ----------------SQYEDAIPYFKRAIAVFEESNILP-SLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHHHTTCGG-GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ----------------CCHHHHHHHHHHHHHHHHhhccch-hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 889999999999999 46 6 66788999999999999999999999999998654
No 97
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.67 E-value=2.6e-15 Score=120.38 Aligned_cols=150 Identities=10% Similarity=0.033 Sum_probs=128.0
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
+..+..++ .. |++++|+..+++++ +| ++.+++.+|.+|...|++. +|+..++++++++|+
T Consensus 10 ~~~g~~~~--~~-~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al~~~~~ 69 (213)
T 1hh8_A 10 WNEGVLAA--DK-KDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMT--------------EAEKAFTRSINRDKH 69 (213)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTT
T ss_pred HHHHHHHH--Hh-CCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCcc
Confidence 45566666 56 99999999999996 34 7899999999999999875 999999999999999
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh----------------hHHHHHHHHHHHhhccch
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF----------------TLYSLKGRYQYEISKLSF 175 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~----------------~~~~~lG~~~~~~~~~~~ 175 (259)
++.++..+|.++...|++. .|...+++++++.|++. .+++.+|.++...
T Consensus 70 ~~~~~~~lg~~~~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 134 (213)
T 1hh8_A 70 LAVAYFQRGMLYYQTEKYD----------LAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKK----- 134 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHT-----
T ss_pred chHHHHHHHHHHHHcccHH----------HHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHc-----
Confidence 9999999999999999887 56789999999999887 9999999999875
Q ss_pred HHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 176 FERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 176 ~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
|++++|+.+|+++++++| ... .++.++|+..+.+.....|.
T Consensus 135 ---------------g~~~~A~~~~~~al~~~p-~~~------------~~~~~~a~~~~~~~~~~~~~ 175 (213)
T 1hh8_A 135 ---------------EEWKKAEEQLALATSMKS-EPR------------HSKIDKAMECVWKQKLYEPV 175 (213)
T ss_dssp ---------------TCHHHHHHHHHHHHTTCC-SGG------------GGHHHHHHHHHHTTCCCCCC
T ss_pred ---------------cCHHHHHHHHHHHHHcCc-ccc------------cchHHHHHHHHHhccccccc
Confidence 889999999999999999 542 24556677777666555444
No 98
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.67 E-value=8.3e-16 Score=119.03 Aligned_cols=119 Identities=16% Similarity=0.118 Sum_probs=106.6
Q ss_pred cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcH
Q psy9159 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCG 139 (259)
Q Consensus 60 ~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~ 139 (259)
.++.++++++.+|.++...|++. +|+..++++++++|+++.++..+|.++...|++.
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~--------- 62 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYS--------------KAIDLYTQALSIAPANPIYLSNRAAAYSASGQHE--------- 62 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH---------
T ss_pred hhhhhHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHH---------
Confidence 46778899999999999999875 9999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHH
Q psy9159 140 VVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIA 219 (259)
Q Consensus 140 ~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la 219 (259)
.++..++++++++|+++.+|+.+|.++... |++++|+.+|+++++++| ++..++..++
T Consensus 63 -~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------------g~~~~A~~~~~~al~~~p-~~~~~~~~~~ 120 (164)
T 3sz7_A 63 -KAAEDAELATVVDPKYSKAWSRLGLARFDM--------------------ADYKGAKEAYEKGIEAEG-NGGSDAMKRG 120 (164)
T ss_dssp -HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHS-SSCCHHHHHH
T ss_pred -HHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------------cCHHHHHHHHHHHHHhCC-CchHHHHHHH
Confidence 567899999999999999999999999875 889999999999999999 6777666666
Q ss_pred HHHH
Q psy9159 220 KCYI 223 (259)
Q Consensus 220 ~~~~ 223 (259)
.+..
T Consensus 121 l~~~ 124 (164)
T 3sz7_A 121 LETT 124 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 99
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=3.5e-16 Score=115.65 Aligned_cols=102 Identities=24% Similarity=0.251 Sum_probs=95.1
Q ss_pred CCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCC
Q psy9159 110 PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLD 189 (259)
Q Consensus 110 P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (259)
|..+..+...|..+...|++. .|...++++++++|+++.+|+.+|.++...
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~~a~~~~~~------------------- 51 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWP----------NAVKAYTEMIKRAPEDARGYSNRAAALAKL------------------- 51 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-------------------
T ss_pred CchHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHHhCCCChHHHHHHHHHHHHh-------------------
Confidence 456778889999999999887 567899999999999999999999999885
Q ss_pred CCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 190 EPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
|++++|+.+|+++++++| ++..+++.+|.++..+|++++|++.|+++++++
T Consensus 52 -~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 52 -MSFPEAIADCNKAIEKDP-NFVRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp -TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -cCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 889999999999999999 789999999999999999999999999999999
No 100
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.66 E-value=7e-16 Score=131.88 Aligned_cols=170 Identities=11% Similarity=0.061 Sum_probs=136.0
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCC------HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHH
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPND------PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKA 105 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~------~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ka 105 (259)
+.++..+++ .. |++++|+..+.+++...+.. ..++..+|.+|..+|++. +|+.+++++
T Consensus 39 ~~~a~~~~~-~~-g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~--------------~A~~~~~~A 102 (307)
T 2ifu_A 39 YAKAAVAFK-NA-KQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMP--------------EAVQYIEKA 102 (307)
T ss_dssp HHHHHHHHH-HT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG--------------GGHHHHHHH
T ss_pred HHHHHHHHH-Hc-CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHH--------------HHHHHHHHH
Confidence 444444442 45 99999999999999876533 568888999999988876 899999999
Q ss_pred HHhCCCC------hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC------hhHHHHHHHHHHHhhcc
Q psy9159 106 MELAPNN------SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD------FTLYSLKGRYQYEISKL 173 (259)
Q Consensus 106 l~~~P~~------~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~------~~~~~~lG~~~~~~~~~ 173 (259)
+++.+.. ..++..+|.++.. |++. .|+.+|++|+++.|.. ..++..+|.++...
T Consensus 103 l~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~----------~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~--- 168 (307)
T 2ifu_A 103 SVMYVENGTPDTAAMALDRAGKLMEP-LDLS----------KAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQ--- 168 (307)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHTT-TCHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHc-CCHH----------HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHc---
Confidence 9885432 3566778888876 7766 5778999999998865 56788899988774
Q ss_pred chHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCc-----HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 174 SFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPW-----KENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 174 ~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~-----~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
|++++|+.+|++++++.|+.. ...++.+|.++..+|++++|++.|++++ ++|.....
T Consensus 169 -----------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 169 -----------------QKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp -----------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred -----------------CCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 889999999999999876221 2468889999999999999999999999 99987654
Q ss_pred h
Q psy9159 249 H 249 (259)
Q Consensus 249 ~ 249 (259)
.
T Consensus 231 ~ 231 (307)
T 2ifu_A 231 E 231 (307)
T ss_dssp H
T ss_pred H
Confidence 4
No 101
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.66 E-value=5.9e-17 Score=146.42 Aligned_cols=149 Identities=13% Similarity=0.035 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC------------
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN------------ 112 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~------------ 112 (259)
+++++|++.++.++...|+.+.++..+|.+++..|++. +|+..|++|++++|++
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~--------------~A~~~y~~Al~~~p~~~~~~~~~~~~~~ 313 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYM--------------QAVIQYGKIVSWLEMEYGLSEKESKASE 313 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHTTCCSCCHHHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHH--------------HHHHHHHHHHHHhcccccCChHHHHHHH
Confidence 56678888888888889999999999999999999875 9999999999999999
Q ss_pred ---hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCC
Q psy9159 113 ---SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLD 189 (259)
Q Consensus 113 ---~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (259)
..++.++|.++..++++. .|+..++++|+++|+++.+|+.+|.++..+
T Consensus 314 ~~~~~~~~nla~~~~~~g~~~----------~A~~~~~~al~~~p~~~~a~~~~g~a~~~~------------------- 364 (457)
T 1kt0_A 314 SFLLAAFLNLAMCYLKLREYT----------KAVECCDKALGLDSANEKGLYRRGEAQLLM------------------- 364 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHhcCCccHHHHHHHHHHHHHc-------------------
Confidence 689999999999999987 577999999999999999999999999885
Q ss_pred CCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHH-HHHHH
Q psy9159 190 EPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQ-WLDKA 238 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~-~~~ka 238 (259)
|++++|+.+|++|++++| ++..++..++.++..+|++++|.+ .+++.
T Consensus 365 -g~~~~A~~~~~~al~l~P-~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 365 -NEFESAKGDFEKVLEVNP-QNKAARLQISMCQKKAKEHNERDRRIYANM 412 (457)
T ss_dssp -TCHHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -cCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999 788999999999999999998864 34433
No 102
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.66 E-value=1.9e-15 Score=126.58 Aligned_cols=182 Identities=14% Similarity=0.089 Sum_probs=143.0
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhc-hhccc-------------CcHHHHHHHHHHHHHHHHHHHHhC-----
Q psy9159 49 KAYNLTMELNNKQPNDPDVLYRLAKACHCLYD-IKRRE-------------NDKEASEKYILQGIEYAKKAMELA----- 109 (259)
Q Consensus 49 ~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~-~~~~~-------------~~~~~~~~~~~~A~~~~~kal~~~----- 109 (259)
-.+.+++-.+..+|++...+...|..|...++ +.+.+ .+..+....+.+|.++..++|+..
T Consensus 50 ~~Lk~~e~Ll~~~P~~~~Ll~~~a~ly~~Ya~afV~~~a~~~~~~~~~~~~~~~~RA~~Ly~ra~~y~~raL~~~~~~~~ 129 (301)
T 3u64_A 50 LVLKVYEALHLQNPAHRGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGFT 129 (301)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHTHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTHH
T ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHhcCchhhcchhhHhhhhhhHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 34567888899999999999999999987765 33210 112355677888888888888653
Q ss_pred -------------------CCChHHHHHHHHHHHHhhch-hhHHHHHhcHHHHHHHHHHHHccCCC--ChhHHHHHHHHH
Q psy9159 110 -------------------PNNSNTQKWYGICVGANGQF-QSLKEKIKCGVVFRDQMNKAIQMAPK--DFTLYSLKGRYQ 167 (259)
Q Consensus 110 -------------------P~~~~~~~~la~~~~~~~~~-~~~~~~~~~~~~a~~~~~kAl~l~P~--~~~~~~~lG~~~ 167 (259)
|+++++++|.|.+.+..... .+....+.....++..+++|+++||+ +..+|..+|.+|
T Consensus 130 ~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY 209 (301)
T 3u64_A 130 REVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFY 209 (301)
T ss_dssp HHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHH
Confidence 45689999999988763222 12222344555788999999999999 788999999999
Q ss_pred HHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHh-CCHHHHHHHHHHHhcCCCCC
Q psy9159 168 YEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEA-GEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~-g~~~eA~~~~~kal~l~p~~ 245 (259)
.....+ .-|+.++|..+|++|++++|+.++.+++..|..++.. |++++|.+.+++|++.+|..
T Consensus 210 ~~vPp~---------------~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 210 AAAPES---------------FGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHSCTT---------------TTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HhCCCc---------------cCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 876321 1389999999999999999954589999999999885 99999999999999999986
No 103
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.66 E-value=3e-15 Score=130.02 Aligned_cols=167 Identities=8% Similarity=-0.020 Sum_probs=143.3
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
+..++|++.+.+++..+|++..+|...+.++..+|.. +++++..+.+++.++|++..+|.+.+.++.
T Consensus 68 e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~-------------l~eEL~~~~~~L~~nPKny~aW~hR~wlL~ 134 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKS-------------LEDELRLMNEFAVQNLKSYQVWHHRLLLLD 134 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC-------------HHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhh-------------HHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 6678999999999999999999999999999998842 249999999999999999999999999998
Q ss_pred Hh-h-chhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHH
Q psy9159 125 AN-G-QFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLK 202 (259)
Q Consensus 125 ~~-~-~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~k 202 (259)
.+ + ++. ..++.++++|+++|.|..+|+.++.+....+..... .....+++++++++
T Consensus 135 ~l~~~~~~----------~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~------------~~~~~~eELe~~~k 192 (349)
T 3q7a_A 135 RISPQDPV----------SEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRI------------SEAQWGSELDWCNE 192 (349)
T ss_dssp HHCCSCCH----------HHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCC------------CHHHHHHHHHHHHH
T ss_pred HhcCCChH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccccc------------chhhHHHHHHHHHH
Confidence 87 5 443 456889999999999999999999887665332100 00123599999999
Q ss_pred HHhhCCCCcHHhHHHHHHHHHHhCC-------HHHHHHHHHHHhcCCCCCcc
Q psy9159 203 AEELAPAPWKENQLLIAKCYIEAGE-------YAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 203 Ai~l~P~~~~~~~~~la~~~~~~g~-------~~eA~~~~~kal~l~p~~~~ 247 (259)
+++.+| .+..+|.+++.++..+++ ++++++++++++.++|.|..
T Consensus 193 ~I~~dp-~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~S 243 (349)
T 3q7a_A 193 MLRVDG-RNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVS 243 (349)
T ss_dssp HHHHCT-TCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHhCC-CCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHH
Confidence 999999 789999999999999997 79999999999999998864
No 104
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.66 E-value=1.6e-14 Score=120.56 Aligned_cols=171 Identities=13% Similarity=0.077 Sum_probs=136.9
Q ss_pred CcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH----hhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH
Q psy9159 43 KKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHC----LYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKW 118 (259)
Q Consensus 43 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~----~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~ 118 (259)
. +++++|+..++++++.+ ++.+++.+|.+|.. .+++. +|+.+++++++.+ ++.++..
T Consensus 55 ~-~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~--------------~A~~~~~~a~~~~--~~~a~~~ 115 (273)
T 1ouv_A 55 E-KNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTN--------------KALQYYSKACDLK--YAEGCAS 115 (273)
T ss_dssp C-CCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHH--------------HHHHHHHHHHHTT--CHHHHHH
T ss_pred C-CCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHH--------------HHHHHHHHHHHcC--CccHHHH
Confidence 5 99999999999999875 89999999999998 77654 8999999998874 8899999
Q ss_pred HHHHHHH----hhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH----hhccc----hHHHHHH-----
Q psy9159 119 YGICVGA----NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE----ISKLS----FFERKIA----- 181 (259)
Q Consensus 119 la~~~~~----~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~----~~~~~----~~~~~~~----- 181 (259)
+|.++.. .+++. ++...++++++++ ++.+++.+|.++.. .++.+ ++.+++.
T Consensus 116 lg~~~~~~~~~~~~~~----------~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 183 (273)
T 1ouv_A 116 LGGIYHDGKVVTRDFK----------KAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSP 183 (273)
T ss_dssp HHHHHHHCSSSCCCHH----------HHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCCcccCHH----------HHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHH
Confidence 9999887 66665 5678888888876 67788888888876 44432 3333321
Q ss_pred ------HHHh-cCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHH----hCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 182 ------VLIV-SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIE----AGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 182 ------~~~~-~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~----~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
..+. +....+++++|+.+|+++++.+| ..++..+|.+|.. .+++++|+++|+++++++|.++.
T Consensus 184 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~---~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~ 257 (273)
T 1ouv_A 184 GCFNAGNMYHHGEGATKNFKEALARYSKACELEN---GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGAC 257 (273)
T ss_dssp HHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC---HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHH
Confidence 1111 12226899999999999999977 6789999999999 99999999999999999976553
No 105
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.66 E-value=8.7e-16 Score=118.92 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=100.7
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
+|.++.++..+|.++...|++. .++..|+++++++|+++.+|+.+|.++...
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~----------~A~~~~~~al~~~p~~~~~~~~l~~~~~~~------------------ 58 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYS----------KAIDLYTQALSIAPANPIYLSNRAAAYSAS------------------ 58 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHT------------------
T ss_pred hhhhHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCcCHHHHHHHHHHHHHc------------------
Confidence 4667888999999999999887 577899999999999999999999999885
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 189 DEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|++++|+.+|+++++++| ++..+++.+|.+|..+|++++|+++|+++++++|++++
T Consensus 59 --g~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 59 --GQHEKAAEDAELATVVDP-KYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp --TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred --cCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 889999999999999999 78999999999999999999999999999999999876
No 106
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.65 E-value=7.3e-16 Score=129.63 Aligned_cols=164 Identities=14% Similarity=0.157 Sum_probs=138.6
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhh--------cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHH
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNN--------KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAK 103 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~--------~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ 103 (259)
...+..++ .. |++++|+..++++++ ..|..+.++..+|.+|...|++. +|+.+++
T Consensus 31 ~~l~~~~~--~~-g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--------------~A~~~~~ 93 (311)
T 3nf1_A 31 HNLVIQYA--SQ-GRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYK--------------DAANLLN 93 (311)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHH
T ss_pred HHHHHHHH--Hc-CCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHH--------------HHHHHHH
Confidence 34455555 56 999999999999999 47888999999999999999875 8888888
Q ss_pred HHHHh--------CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccC--------CCChhHHHHHHHHH
Q psy9159 104 KAMEL--------APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMA--------PKDFTLYSLKGRYQ 167 (259)
Q Consensus 104 kal~~--------~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~--------P~~~~~~~~lG~~~ 167 (259)
+++++ .|....++..+|.++...|++. .+...+++++++. |....++..+|.++
T Consensus 94 ~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~----------~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 163 (311)
T 3nf1_A 94 DALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYK----------EAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLC 163 (311)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH----------HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHH----------HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 88887 4667788899999999998887 4567777777763 66678899999988
Q ss_pred HHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh--------CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHh
Q psy9159 168 YEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL--------APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAK 239 (259)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l--------~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal 239 (259)
... |++++|+.+|++++++ +| ....++..+|.+|..+|++++|++++++++
T Consensus 164 ~~~--------------------~~~~~A~~~~~~a~~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al 222 (311)
T 3nf1_A 164 QNQ--------------------GKYEEVEYYYQRALEIYQTKLGPDDP-NVAKTKNNLASCYLKQGKFKQAETLYKEIL 222 (311)
T ss_dssp HTT--------------------TCHHHHHHHHHHHHHHHHHTSCTTCH-HHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHc--------------------CCHHHHHHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 764 8899999999999998 66 567789999999999999999999999999
Q ss_pred cCCC
Q psy9159 240 AIPV 243 (259)
Q Consensus 240 ~l~p 243 (259)
++.|
T Consensus 223 ~~~~ 226 (311)
T 3nf1_A 223 TRAH 226 (311)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8643
No 107
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.65 E-value=9.7e-18 Score=145.64 Aligned_cols=168 Identities=14% Similarity=0.021 Sum_probs=135.0
Q ss_pred CCHHHHHHHHHH----HhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Q psy9159 45 DDKAKAYNLTME----LNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYG 120 (259)
Q Consensus 45 ~~~~~A~~~~~~----~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la 120 (259)
+.+++|+..+.. ++...|+. ++..+|.......... ...-...+..+++|++.++++++.+|+++.++..+|
T Consensus 79 ~~~e~al~~~~~Ge~~~l~i~p~~--ayg~~g~~~~~i~~~~--~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g 154 (336)
T 1p5q_A 79 YGLERAIQRMEKGEHSIVYLKPSY--AFGSVGKEKFQIPPNA--ELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERG 154 (336)
T ss_dssp HHHHHHHTTCCTTCEEEEEECTTT--TTTTTCBGGGTBCSSC--CEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhcCCCCCeEEEEECCcc--ccCcCCCCccCCCCCC--eEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHH
Confidence 578999999999 88899986 3333333321000000 000000111234788889999999999999999999
Q ss_pred HHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC---------------hhHHHHHHHHHHHhhccchHHHHHHHHHh
Q psy9159 121 ICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD---------------FTLYSLKGRYQYEISKLSFFERKIAVLIV 185 (259)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~---------------~~~~~~lG~~~~~~~~~~~~~~~~~~~~~ 185 (259)
.++...|++. .|...|++|++++|++ ..+|+.+|.++...
T Consensus 155 ~~~~~~g~~~----------~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--------------- 209 (336)
T 1p5q_A 155 TVYFKEGKYK----------QALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKL--------------- 209 (336)
T ss_dssp HHHHHHTCHH----------HHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHT---------------
T ss_pred HHHHHCCCHH----------HHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHc---------------
Confidence 9999999887 5779999999999999 59999999999885
Q ss_pred cCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 186 SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 186 ~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|++++|+.+|++|++++| ++..+++.+|.+|..+|++++|+..|+++++++|.+.+
T Consensus 210 -----g~~~~A~~~~~~al~~~p-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~ 265 (336)
T 1p5q_A 210 -----QAFSAAIESCNKALELDS-NNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKA 265 (336)
T ss_dssp -----TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHH
T ss_pred -----CCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
Confidence 889999999999999999 78999999999999999999999999999999998865
No 108
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.65 E-value=4.3e-15 Score=125.90 Aligned_cols=167 Identities=13% Similarity=0.016 Sum_probs=134.6
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHH------HHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHH
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDV------LYRLAKACHCLYDIKRRENDKEASEKYILQGIEYA 102 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~------~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~ 102 (259)
......+..++ .. |++++|++.+.++++..|..+.. ++.+|.++...|++ ++|+..+
T Consensus 76 ~~l~~~~~~~~--~~-~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~A~~~~ 138 (293)
T 2qfc_A 76 KQFKDQVIMLC--KQ-KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDY--------------EYCILEL 138 (293)
T ss_dssp HHHHHHHHHHH--HT-TCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCH--------------HHHHHHH
T ss_pred HHHHHHHHHHH--Hh-hhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCH--------------HHHHHHH
Confidence 34456777777 67 99999999999999988876643 45566666666665 4999999
Q ss_pred HHHHHhCCCC------hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHH---ccCCCCh----hHHHHHHHHHHH
Q psy9159 103 KKAMELAPNN------SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAI---QMAPKDF----TLYSLKGRYQYE 169 (259)
Q Consensus 103 ~kal~~~P~~------~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl---~l~P~~~----~~~~~lG~~~~~ 169 (259)
++++++.+.. ..++..+|.++...|++. .|...+++|+ +..|++. .+++.+|.+|..
T Consensus 139 ~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~----------~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 139 KKLLNQQLTGIDVYQNLYIENAIANIYAENGYLK----------KGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp HHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH
Confidence 9999887655 567888999999999887 5678888888 5566644 688999999987
Q ss_pred hhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCC-----CcHHhHHHHHHHHHHhCCHHHH-HHHHHHHhcCC
Q psy9159 170 ISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPA-----PWKENQLLIAKCYIEAGEYAKA-VQWLDKAKAIP 242 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~-----~~~~~~~~la~~~~~~g~~~eA-~~~~~kal~l~ 242 (259)
. |++++|+.+|++|+++.++ ....++.++|.+|..+|++++| ..++++|+.+.
T Consensus 209 ~--------------------~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 209 D--------------------SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp T--------------------TCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred H--------------------hhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 5 8899999999999998641 0257799999999999999999 88899998764
No 109
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.65 E-value=3.7e-16 Score=132.20 Aligned_cols=181 Identities=13% Similarity=0.050 Sum_probs=141.8
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P 110 (259)
....+..++ .. |++++|+..|++++..+|+++.+++++|.+|..+|++. +|+..++++++++|
T Consensus 7 ~~~~g~~~~--~~-g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~--------------~A~~~~~~al~~~p 69 (281)
T 2c2l_A 7 LKEQGNRLF--VG-RKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPE--------------QALADCRRALELDG 69 (281)
T ss_dssp HHHHHHHHH--HT-TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHTTSCT
T ss_pred HHHHHHHHH--Hc-CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHH--------------HHHHHHHHHHHhCC
Confidence 456677777 67 99999999999999999999999999999999999875 99999999999999
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhc-c-------------chH
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISK-L-------------SFF 176 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~-~-------------~~~ 176 (259)
+++.+++.+|.++...|++. .|...++++++++|+++..+............ . ..+
T Consensus 70 ~~~~~~~~lg~~~~~~g~~~----------~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 139 (281)
T 2c2l_A 70 QSVKAHFFLGQCQLEMESYD----------EAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESEL 139 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHH
T ss_pred CCHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999999999999887 56789999999999875332222111111110 0 011
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHh-CCHHHHHHHHHHHhcCCCC
Q psy9159 177 ERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEA-GEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 177 ~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~-g~~~eA~~~~~kal~l~p~ 244 (259)
...++..+ .|++++|++.+++|++++| ++......++..+... +++++|.+.|+++.+..+.
T Consensus 140 ~~~l~~l~-----~~~~~~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~~~~~ 202 (281)
T 2c2l_A 140 HSYLTRLI-----AAERERELEECQRNHEGHE-DDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKK 202 (281)
T ss_dssp HHHHHHHH-----HHHHHHHHTTTSGGGTTTS-CHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred HHHHHHHH-----HHHHHHHHHHHHhhhcccc-chhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccccC
Confidence 11111111 3789999999999999999 6677777777777777 7799999999999875443
No 110
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.65 E-value=7.2e-16 Score=130.87 Aligned_cols=158 Identities=11% Similarity=0.063 Sum_probs=127.7
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCC------HHHHHHHHHHHHHh-hchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC--
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPND------PDVLYRLAKACHCL-YDIKRRENDKEASEKYILQGIEYAKKAMELAPNN-- 112 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~------~~~~~~la~~~~~~-g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~-- 112 (259)
.. |++++|+..++++++..|.. +.++.++|.+|... |++. +|+..+++|+++.|++
T Consensus 89 ~~-g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~--------------~A~~~~~~Al~~~~~~~~ 153 (292)
T 1qqe_A 89 SG-GNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYA--------------KAIDCYELAGEWYAQDQS 153 (292)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH--------------HHHHHHHHHHHHHHHTTC
T ss_pred HC-CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHH--------------HHHHHHHHHHHHHHhCCC
Confidence 45 99999999999999987754 56888999999985 8875 9999999999999875
Q ss_pred ----hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChh-------HHHHHHHHHHHhhccchHHHHHH
Q psy9159 113 ----SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFT-------LYSLKGRYQYEISKLSFFERKIA 181 (259)
Q Consensus 113 ----~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~-------~~~~lG~~~~~~~~~~~~~~~~~ 181 (259)
..++..+|.++...|++. .|...++++++++|++.. ++..+|.++...
T Consensus 154 ~~~~~~~~~~lg~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~----------- 212 (292)
T 1qqe_A 154 VALSNKCFIKCADLKALDGQYI----------EASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAA----------- 212 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHT-----------
T ss_pred hHHHHHHHHHHHHHHHHhCCHH----------HHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHc-----------
Confidence 567888999999999887 567899999999998765 578888888764
Q ss_pred HHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHh-----HHHHHHHHH--HhCCHHHHHHHHHHHhcCCCCC
Q psy9159 182 VLIVSDLDEPTAEDAIANCLKAEELAPAPWKEN-----QLLIAKCYI--EAGEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 182 ~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~-----~~~la~~~~--~~g~~~eA~~~~~kal~l~p~~ 245 (259)
|++++|+.+|+++++++| .+... ...++.++. ..+++++|+..|++++.++|..
T Consensus 213 ---------g~~~~A~~~~~~al~l~p-~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~~~~ 273 (292)
T 1qqe_A 213 ---------TDAVAAARTLQEGQSEDP-NFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWK 273 (292)
T ss_dssp ---------TCHHHHHHHHHGGGCC----------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCHHH
T ss_pred ---------CCHHHHHHHHHHHHhhCC-CCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccHHHH
Confidence 889999999999999999 54442 345666664 4578999999999999998754
No 111
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.65 E-value=1.8e-15 Score=128.22 Aligned_cols=165 Identities=15% Similarity=0.048 Sum_probs=129.4
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHH------HHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHH
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDV------LYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKA 105 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~------~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ka 105 (259)
...+..++ .. |++++|+..++++++..|.+++. +..+|.++...+++ ++|+.+++++
T Consensus 79 ~~~i~~~~--~~-~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------------~~Ai~~~~~a 141 (293)
T 3u3w_A 79 KDQVIMLC--KQ-KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDY--------------EYCILELKKL 141 (293)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCH--------------HHHHHHHHHH
T ss_pred HHHHHHHH--HH-hhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCH--------------HHHHHHHHHH
Confidence 34466677 56 99999999999999988888773 22356655555554 4999999999
Q ss_pred HHhCCCChH------HHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHc-------cCCCChhHHHHHHHHHHHhhc
Q psy9159 106 MELAPNNSN------TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQ-------MAPKDFTLYSLKGRYQYEISK 172 (259)
Q Consensus 106 l~~~P~~~~------~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~-------l~P~~~~~~~~lG~~~~~~~~ 172 (259)
+++.+.... ++..+|.++...|++. .|..+++++++ ..|....+++.+|.+|...
T Consensus 142 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~-- 209 (293)
T 3u3w_A 142 LNQQLTGIDVYQNLYIENAIANIYAENGYLK----------KGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLD-- 209 (293)
T ss_dssp HHTCCCCSCTTHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHhcccccHHHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH--
Confidence 997655443 6888999999999887 45677777773 2333456889999999885
Q ss_pred cchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCC-----CcHHhHHHHHHHHHHhC-CHHHHHHHHHHHhcCCC
Q psy9159 173 LSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPA-----PWKENQLLIAKCYIEAG-EYAKAVQWLDKAKAIPV 243 (259)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~-----~~~~~~~~la~~~~~~g-~~~eA~~~~~kal~l~p 243 (259)
|++++|+.++++|+++.+. ....++.++|.+|..+| ++++|+++|++|+.+..
T Consensus 210 ------------------~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 210 ------------------SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp ------------------TCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 8899999999999998641 12678999999999999 47999999999998653
No 112
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.65 E-value=1.3e-15 Score=112.60 Aligned_cols=101 Identities=14% Similarity=-0.061 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHH
Q psy9159 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAE 194 (259)
Q Consensus 115 ~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 194 (259)
.++.+|.++...|++. .|...++++++++|+++.+|+.+|.++... |+++
T Consensus 19 ~~~~~g~~~~~~g~~~----------~A~~~~~~al~~~P~~~~a~~~lg~~~~~~--------------------g~~~ 68 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLA----------EAALAFEAVCQKEPEREEAWRSLGLTQAEN--------------------EKDG 68 (121)
T ss_dssp CHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHT--------------------TCHH
T ss_pred hHHHHHHHHHHcCCHH----------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHc--------------------CCHH
Confidence 4677888888888877 567899999999999999999999999875 8899
Q ss_pred HHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 195 DAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 195 eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
+|+.+|++|++++| ++..++..+|.+|..+|++++|+..++++++++|.+.
T Consensus 69 ~A~~~~~~al~l~P-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 69 LAIIALNHARMLDP-KDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 99999999999999 7899999999999999999999999999999999765
No 113
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.65 E-value=5.4e-16 Score=115.66 Aligned_cols=103 Identities=18% Similarity=0.272 Sum_probs=92.5
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCC
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDE 190 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (259)
+.+.++..+|.++...|++. +|+..|++||+++|+++.+|..+|.+|..+
T Consensus 6 d~A~a~~~lG~~~~~~~~~~----------~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~-------------------- 55 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFE----------KAHVHYDKAIELDPSNITFYNNKAAVYFEE-------------------- 55 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------
T ss_pred HHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHhHHHHHHHh--------------------
Confidence 45667888999999999987 578999999999999999999999999885
Q ss_pred CcHHHHHHHHHHHHhhCCCCcH-------HhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 191 PTAEDAIANCLKAEELAPAPWK-------ENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~-------~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
|++++|+.+|++|++++| ++. .++..+|.++..+|++++|+++|+++++.+|+
T Consensus 56 ~~~~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 56 KKFAECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp TCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred hhHHHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 889999999999999998 432 47889999999999999999999999998874
No 114
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.64 E-value=1e-14 Score=126.03 Aligned_cols=172 Identities=6% Similarity=-0.076 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q psy9159 47 KAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGAN 126 (259)
Q Consensus 47 ~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~ 126 (259)
+++++..+..++..+|+++.+|...+.++..++... ++++++.+.++++++|.|..+|.+.+.++...
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~------------~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l 157 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN------------WARELELCARFLEADERNFHCWDYRRFVAAQA 157 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCC------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCccc------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999988521 35999999999999999999999999999988
Q ss_pred hchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh
Q psy9159 127 GQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL 206 (259)
Q Consensus 127 ~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l 206 (259)
+... ..+.+.++++|+.+|.|..+|+.+|.+...+....... -.+..+.+.++++++++.+++.+
T Consensus 158 ~~~~---------~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~------~~~~~~~~~~~eEle~~~~ai~~ 222 (331)
T 3dss_A 158 AVAP---------AEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSG------PQGRLPENVLLKELELVQNAFFT 222 (331)
T ss_dssp TCCH---------HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------------CCCHHHHHHHHHHHHHHHHH
T ss_pred CcCH---------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccc------cccccchHHHHHHHHHHHHHHHh
Confidence 8631 14578899999999999999999999887652210000 00001125689999999999999
Q ss_pred CCCCcHHhHHHHHHHHHHh-----------CCHHHHHHHHHHHhcCCCCCc
Q psy9159 207 APAPWKENQLLIAKCYIEA-----------GEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 207 ~P~~~~~~~~~la~~~~~~-----------g~~~eA~~~~~kal~l~p~~~ 246 (259)
+| ++..+|+++..++... +.+++++++++++++++|++.
T Consensus 223 ~P-~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~~ 272 (331)
T 3dss_A 223 DP-NDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPENK 272 (331)
T ss_dssp ST-TCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CC-CCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCcccc
Confidence 99 7788898777666665 468999999999999999774
No 115
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.64 E-value=3.4e-15 Score=111.29 Aligned_cols=123 Identities=13% Similarity=0.054 Sum_probs=94.3
Q ss_pred hcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhc
Q psy9159 59 NKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKC 138 (259)
Q Consensus 59 ~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~ 138 (259)
..+|.++..++.+|.++...|++. +|+..++++++++|+++.++..+|.++...+++.
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~--------------~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~-------- 60 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYP--------------EAAACYGRAITRNPLVAVYYTNRALCYLKMQQPE-------- 60 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------
T ss_pred CCccccHHHHHHHHHHHHHhCcHH--------------HHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHH--------
Confidence 346778888888888888888765 8888888888888888888888888888888776
Q ss_pred HHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCC-----cHH
Q psy9159 139 GVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAP-----WKE 213 (259)
Q Consensus 139 ~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~-----~~~ 213 (259)
.+...++++++++|+++.+|+.+|.++... |++++|+.+|+++++++| + ...
T Consensus 61 --~A~~~~~~al~~~p~~~~~~~~l~~~~~~~--------------------~~~~~A~~~~~~a~~~~p-~~~~~~~~~ 117 (137)
T 3q49_B 61 --QALADCRRALELDGQSVKAHFFLGQCQLEM--------------------ESYDEAIANLQRAYSLAK-EQRLNFGDD 117 (137)
T ss_dssp --HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHH-HTTCCCTTH
T ss_pred --HHHHHHHHHHHhCchhHHHHHHHHHHHHHH--------------------hhHHHHHHHHHHHHHHCh-hHHHHHHHH
Confidence 456788888888888888888888888764 778888888888888887 4 345
Q ss_pred hHHHHHHHHHHhC
Q psy9159 214 NQLLIAKCYIEAG 226 (259)
Q Consensus 214 ~~~~la~~~~~~g 226 (259)
+...+..+.....
T Consensus 118 ~~~~l~~~~~~~~ 130 (137)
T 3q49_B 118 IPSALRIAKKKRW 130 (137)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5555555554443
No 116
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.64 E-value=1.2e-14 Score=106.51 Aligned_cols=128 Identities=23% Similarity=0.281 Sum_probs=116.2
Q ss_pred HHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh
Q psy9159 34 EIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS 113 (259)
Q Consensus 34 ~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~ 113 (259)
.+..+. .. |++++|+..++++++.+|+++.++..+|.++...|++. +|+..+++++..+|+++
T Consensus 7 l~~~~~--~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--------------~A~~~~~~~~~~~~~~~ 69 (136)
T 2fo7_A 7 LGNAYY--KQ-GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYD--------------EAIEYYQKALELDPRSA 69 (136)
T ss_dssp HHHHHH--HH-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHCTTCH
T ss_pred HHHHHH--Hc-CcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHH--------------HHHHHHHHHHHHCCCch
Confidence 344455 45 99999999999999999999999999999999999875 99999999999999999
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcH
Q psy9159 114 NTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTA 193 (259)
Q Consensus 114 ~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 193 (259)
.++..+|.++...|++. .+...++++++++|+++.++..+|.++... |++
T Consensus 70 ~~~~~l~~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~la~~~~~~--------------------~~~ 119 (136)
T 2fo7_A 70 EAWYNLGNAYYKQGDYD----------EAIEYYQKALELDPRSAEAWYNLGNAYYKQ--------------------GDY 119 (136)
T ss_dssp HHHHHHHHHHHTTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHTT--------------------TCH
T ss_pred HHHHHHHHHHHHhcCHH----------HHHHHHHHHHHhCCCChHHHHHHHHHHHHH--------------------ccH
Confidence 99999999999988877 567889999999999999999999988764 889
Q ss_pred HHHHHHHHHHHhhCC
Q psy9159 194 EDAIANCLKAEELAP 208 (259)
Q Consensus 194 ~eAi~~~~kAi~l~P 208 (259)
++|+.+++++++++|
T Consensus 120 ~~A~~~~~~~~~~~~ 134 (136)
T 2fo7_A 120 DEAIEYYQKALELDP 134 (136)
T ss_dssp HHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHccCC
Confidence 999999999999999
No 117
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.64 E-value=5.5e-16 Score=136.24 Aligned_cols=190 Identities=14% Similarity=0.107 Sum_probs=151.7
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCH----HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHH
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDP----DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAM 106 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~----~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal 106 (259)
.+..+..++ .. |++++|+..++++++.+|+++ .+++.+|.+|...|++. +|+.++++++
T Consensus 51 l~~~g~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al 113 (411)
T 4a1s_A 51 LALEGERLC--NA-GDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYN--------------KAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHH--HT-TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHH
T ss_pred HHHHHHHHH--Hh-CcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHH
Confidence 345666666 56 999999999999999999998 58899999999999875 9999999999
Q ss_pred Hh------CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHcc------CCCChhHHHHHHHHHHHhhc--
Q psy9159 107 EL------APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQM------APKDFTLYSLKGRYQYEISK-- 172 (259)
Q Consensus 107 ~~------~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l------~P~~~~~~~~lG~~~~~~~~-- 172 (259)
++ .|..+.++..+|.++...|++. .+...+++++++ .|....++..+|.++...++
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 183 (411)
T 4a1s_A 114 TLAKSMNDRLGEAKSSGNLGNTLKVMGRFD----------EAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHL 183 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHCCCHH----------HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCccc
Confidence 88 6888899999999999999887 456777888777 66777899999999998888
Q ss_pred ---------------cchH----HHHHHH------------HHh--c--CCCCCcHHHHHHHHHHHHhhCCCCcHH----
Q psy9159 173 ---------------LSFF----ERKIAV------------LIV--S--DLDEPTAEDAIANCLKAEELAPAPWKE---- 213 (259)
Q Consensus 173 ---------------~~~~----~~~~~~------------~~~--~--~~~~g~~~eAi~~~~kAi~l~P~~~~~---- 213 (259)
+... .+++.. .+. + ....|++++|+.+|++++++.| ....
T Consensus 184 ~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~ 262 (411)
T 4a1s_A 184 GQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAR-EFGDRAAE 262 (411)
T ss_dssp HHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTCHHHH
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH-hcCCcHHH
Confidence 4322 222110 000 0 0126999999999999999876 3333
Q ss_pred --hHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 214 --NQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 214 --~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
++..+|.+|..+|++++|++++++++++.|...+.
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 299 (411)
T 4a1s_A 263 RRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGER 299 (411)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCH
Confidence 78999999999999999999999999998766443
No 118
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.64 E-value=1.2e-15 Score=117.71 Aligned_cols=105 Identities=10% Similarity=-0.042 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCC-------Chh-----HHHHHHHHHHHhhccchHHHHH
Q psy9159 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPK-------DFT-----LYSLKGRYQYEISKLSFFERKI 180 (259)
Q Consensus 113 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~-------~~~-----~~~~lG~~~~~~~~~~~~~~~~ 180 (259)
+..+...|..+...|++. .|...|++||+++|+ +.. +|.++|.++..+
T Consensus 11 a~~~~~~G~~l~~~g~~e----------eAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~L---------- 70 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYD----------EAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL---------- 70 (159)
T ss_dssp HHHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHT----------
T ss_pred HHHHHHHHHHHHHCCCHH----------HHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHC----------
Confidence 345677888888888887 578999999999999 444 999999998875
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHHHhh-------CCCCcHHhH----HHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 181 AVLIVSDLDEPTAEDAIANCLKAEEL-------APAPWKENQ----LLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 181 ~~~~~~~~~~g~~~eAi~~~~kAi~l-------~P~~~~~~~----~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
|+|++|+.+|++|+++ +| ++..+| +++|.++..+|++++|++.|++|++++|++..-
T Consensus 71 ----------gr~~eAl~~~~kAL~l~n~~~e~~p-d~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~ 138 (159)
T 2hr2_A 71 ----------RSFDEALHSADKALHYFNRRGELNQ-DEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGE 138 (159)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHCCTTS-THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSC
T ss_pred ----------CCHHHHHHHHHHHHHhhhccccCCC-chHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHH
Confidence 8899999999999999 99 889999 999999999999999999999999999877653
No 119
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.63 E-value=1.5e-15 Score=128.46 Aligned_cols=139 Identities=13% Similarity=0.067 Sum_probs=119.6
Q ss_pred CCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHH
Q psy9159 62 PNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVV 141 (259)
Q Consensus 62 p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~ 141 (259)
|.+++.++.+|.++...|++. +|+..++++++++|+++.++..+|.++...|++. .
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~----------~ 56 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYP--------------EAAACYGRAITRNPLVAVYYTNRALCYLKMQQPE----------Q 56 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH----------H
T ss_pred ChhHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHH----------H
Confidence 678899999999999999875 9999999999999999999999999999999887 5
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcH-----HhH-
Q psy9159 142 FRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWK-----ENQ- 215 (259)
Q Consensus 142 a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~-----~~~- 215 (259)
|...++++++++|+++.+++.+|.++... |++++|+.+|+++++++| ++. ..+
T Consensus 57 A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------------g~~~~A~~~~~~al~l~p-~~~~~~~~~~~~ 115 (281)
T 2c2l_A 57 ALADCRRALELDGQSVKAHFFLGQCQLEM--------------------ESYDEAIANLQRAYSLAK-EQRLNFGDDIPS 115 (281)
T ss_dssp HHHHHHHHTTSCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHH-HTTCCCCSHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCc-cchhhHHHHHHH
Confidence 67899999999999999999999999875 889999999999999998 331 111
Q ss_pred -------------------------HHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 216 -------------------------LLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 216 -------------------------~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
..++.. ..|++++|++.++++++++|.+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~~al~~~p~~~~ 170 (281)
T 2c2l_A 116 ALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQRNHEGHEDDGH 170 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTSGGGTTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHHhhhccccchhh
Confidence 122222 368999999999999999986643
No 120
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.63 E-value=7.6e-16 Score=134.31 Aligned_cols=190 Identities=14% Similarity=0.108 Sum_probs=148.1
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCH----HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHH
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDP----DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAM 106 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~----~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal 106 (259)
.+..+..++ .. |++++|+..++++++..|+++ .++..+|.++...|++. +|+.++++++
T Consensus 12 l~~~g~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al 74 (406)
T 3sf4_A 12 LALEGERLC--KS-GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYA--------------KALEYHHHDL 74 (406)
T ss_dssp HHHHHHHHH--HT-TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHH
T ss_pred HHHHHHHHH--Hh-ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHH--------------HHHHHHHHHH
Confidence 356777777 66 999999999999999999995 67889999999999875 8888888888
Q ss_pred Hh------CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC------hhHHHHHHHHHHHhhc--
Q psy9159 107 EL------APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD------FTLYSLKGRYQYEISK-- 172 (259)
Q Consensus 107 ~~------~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~------~~~~~~lG~~~~~~~~-- 172 (259)
++ .|..+.++..+|.++...|++. .+...+++++++.|.. +.++..+|.++...++
T Consensus 75 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 144 (406)
T 3sf4_A 75 TLARTIGDQLGEAKASGNLGNTLKVLGNFD----------EAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSF 144 (406)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcc
Confidence 77 5666788899999999999887 4667888888887764 4489999999988887
Q ss_pred ------------------cchHH----HHHHH------------HHh--c--CCCCCcHHHHHHHHHHHHhhCCCCcH--
Q psy9159 173 ------------------LSFFE----RKIAV------------LIV--S--DLDEPTAEDAIANCLKAEELAPAPWK-- 212 (259)
Q Consensus 173 ------------------~~~~~----~~~~~------------~~~--~--~~~~g~~~eAi~~~~kAi~l~P~~~~-- 212 (259)
+.... +++.. .+. + ....|++++|+.++++++++.| ...
T Consensus 145 ~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~-~~~~~ 223 (406)
T 3sf4_A 145 GCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK-EFGDK 223 (406)
T ss_dssp C-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHH-HTTCH
T ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH-hcCCc
Confidence 43222 21110 000 0 0125899999999999999866 332
Q ss_pred ----HhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 213 ----ENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 213 ----~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
.++..+|.++..+|++++|++++++++++.|...+.
T Consensus 224 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 263 (406)
T 3sf4_A 224 AAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 263 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCc
Confidence 278999999999999999999999999988766543
No 121
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.63 E-value=3.2e-15 Score=130.98 Aligned_cols=165 Identities=10% Similarity=0.023 Sum_probs=134.6
Q ss_pred HHHHHhhcCCcCCHHHHHHHHHHHhhcC------CCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 34 EIDRLLYYGKKDDKAKAYNLTMELNNKQ------PNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 34 ~~~~l~~~~~~~~~~~A~~~~~~~~~~~------p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
.+...+ .. |++++|+..++++++.. |..+.+++.+|.+|..+|++. +|+.++++|++
T Consensus 107 ~g~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~--------------~A~~~~~~al~ 169 (378)
T 3q15_A 107 RGMYEF--DQ-KEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTH--------------VSMYHILQALD 169 (378)
T ss_dssp HHHHHH--HT-TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHH
T ss_pred HHHHHH--HH-CCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcH--------------HHHHHHHHHHH
Confidence 344444 45 99999999999998763 345778999999999999875 89999999998
Q ss_pred hCCCC-------hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCC------ChhHHHHHHHHHHHhhccc
Q psy9159 108 LAPNN-------SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPK------DFTLYSLKGRYQYEISKLS 174 (259)
Q Consensus 108 ~~P~~-------~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~------~~~~~~~lG~~~~~~~~~~ 174 (259)
+.+.. +.++..+|.++...|++. .|.+.+++|+++.+. ...+++.+|.++...
T Consensus 170 ~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~---- 235 (378)
T 3q15_A 170 IYQNHPLYSIRTIQSLFVIAGNYDDFKHYD----------KALPHLEAALELAMDIQNDRFIAISLLNIANSYDRS---- 235 (378)
T ss_dssp HHHTSTTCHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----
T ss_pred HHHhCCCchhhHHHHHHHHHHHHHHhCCHH----------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC----
Confidence 76542 446778888888888887 466788888876432 335788899988875
Q ss_pred hHHHHHHHHHhcCCCCCcHHHHHHHHHHHHh-----hCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEE-----LAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 175 ~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~-----l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
|++++|+.+|++|++ .+| ....++..+|.++..+|++++|++++++++++.+...
T Consensus 236 ----------------~~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 295 (378)
T 3q15_A 236 ----------------GDDQMAVEHFQKAAKVSREKVPD-LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARS 295 (378)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTC
T ss_pred ----------------CCHHHHHHHHHHHHHHHHhhCCh-hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC
Confidence 889999999999999 788 5688899999999999999999999999999876643
No 122
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.63 E-value=2.7e-14 Score=103.53 Aligned_cols=122 Identities=25% Similarity=0.339 Sum_probs=105.2
Q ss_pred cCCCC-HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhc
Q psy9159 60 KQPND-PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKC 138 (259)
Q Consensus 60 ~~p~~-~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~ 138 (259)
.+|.+ +.+++.+|.++...|++. +|+..+++++..+|+++.++..+|.++...|++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~-------- 60 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQGDYD--------------EAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYD-------- 60 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------
T ss_pred CCccccHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHH--------
Confidence 35655 788999999999988875 9999999999999999999999999999888877
Q ss_pred HHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHH
Q psy9159 139 GVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLI 218 (259)
Q Consensus 139 ~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~l 218 (259)
.+...++++++++|+++.++..+|.++... |++++|+.+|+++++++| +...++..+
T Consensus 61 --~A~~~~~~~~~~~~~~~~~~~~la~~~~~~--------------------~~~~~A~~~~~~~~~~~~-~~~~~~~~l 117 (125)
T 1na0_A 61 --EAIEYYQKALELDPNNAEAWYNLGNAYYKQ--------------------GDYDEAIEYYQKALELDP-NNAEAKQNL 117 (125)
T ss_dssp --HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCT-TCHHHHHHH
T ss_pred --HHHHHHHHHHHhCCccHHHHHHHHHHHHHh--------------------cCHHHHHHHHHHHHHhCC-CcHHHHHHH
Confidence 567888999999999999999999988874 789999999999999999 778899999
Q ss_pred HHHHHHhC
Q psy9159 219 AKCYIEAG 226 (259)
Q Consensus 219 a~~~~~~g 226 (259)
|.++..+|
T Consensus 118 ~~~~~~~g 125 (125)
T 1na0_A 118 GNAKQKQG 125 (125)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 99987765
No 123
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.62 E-value=1.4e-15 Score=128.42 Aligned_cols=191 Identities=14% Similarity=0.107 Sum_probs=147.0
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCH----HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHH
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDP----DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKA 105 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~----~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ka 105 (259)
..+..+..++ .. |++++|+..++++++.+|+++ .++..+|.++...|++. +|+.+++++
T Consensus 7 ~l~~~g~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~a 69 (338)
T 3ro2_A 7 ELALEGERLC--KS-GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYA--------------KALEYHHHD 69 (338)
T ss_dssp HHHHHHHHHH--HT-TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHH
T ss_pred HHHHHHHHHH--Hh-ccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHH
Confidence 3456677777 67 999999999999999999994 67889999999999875 888888888
Q ss_pred HHh------CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChh------HHHHHHHHHHHhhc-
Q psy9159 106 MEL------APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFT------LYSLKGRYQYEISK- 172 (259)
Q Consensus 106 l~~------~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~------~~~~lG~~~~~~~~- 172 (259)
+++ .|..+.++..+|.++...|++. .+...+++++++.|.... ++..+|.++...++
T Consensus 70 l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 139 (338)
T 3ro2_A 70 LTLARTIGDQLGEAKASGNLGNTLKVLGNFD----------EAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKS 139 (338)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhcccccHHHHHHHHHHHHHHHHccCHH----------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcc
Confidence 877 5666788889999999998887 466788888887766543 89999999988877
Q ss_pred -------------------cchHH----HHHHH------------HHh--c--CCCCCcHHHHHHHHHHHHhhCCCCcH-
Q psy9159 173 -------------------LSFFE----RKIAV------------LIV--S--DLDEPTAEDAIANCLKAEELAPAPWK- 212 (259)
Q Consensus 173 -------------------~~~~~----~~~~~------------~~~--~--~~~~g~~~eAi~~~~kAi~l~P~~~~- 212 (259)
+.... +.+.. .+. + ....|++++|+.++++++++.| ...
T Consensus 140 ~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~ 218 (338)
T 3ro2_A 140 FGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK-EFGD 218 (338)
T ss_dssp SSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HHTC
T ss_pred cccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hcCC
Confidence 43221 11110 000 0 0125899999999999998865 222
Q ss_pred -----HhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 213 -----ENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 213 -----~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
.++..+|.++...|++++|++++++++++.|...+.
T Consensus 219 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 259 (338)
T 3ro2_A 219 KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 259 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcch
Confidence 378999999999999999999999999888766543
No 124
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=1.1e-14 Score=117.88 Aligned_cols=166 Identities=14% Similarity=0.029 Sum_probs=132.8
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
..-+..+. .. +++++|+..|+++.+. .++++++.+|.+|.. +... .++++|+.++++++ +++
T Consensus 22 ~~lg~~~~--~~-~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~----------~~~~~A~~~~~~A~--~~g 83 (212)
T 3rjv_A 22 YYLADTWV--SS-GDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQ----------ADYPQARQLAEKAV--EAG 83 (212)
T ss_dssp HHHHHHHH--HH-TCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTS----------CCHHHHHHHHHHHH--HTT
T ss_pred HHHHHHHh--cC-CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCC----------CCHHHHHHHHHHHH--HCC
Confidence 34444444 45 9999999999999874 789999999999988 5211 02359999999995 578
Q ss_pred ChHHHHHHHHHHHH----hhchhhHHHHHhcHHHHHHHHHHHHccCC--CChhHHHHHHHHHHHhhccchHHHHHHHHHh
Q psy9159 112 NSNTQKWYGICVGA----NGQFQSLKEKIKCGVVFRDQMNKAIQMAP--KDFTLYSLKGRYQYEISKLSFFERKIAVLIV 185 (259)
Q Consensus 112 ~~~~~~~la~~~~~----~~~~~~~~~~~~~~~~a~~~~~kAl~l~P--~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~ 185 (259)
++.+++.+|.++.. .+++ .++...+++|++..| +++.+++.||.+|..-
T Consensus 84 ~~~a~~~Lg~~y~~g~g~~~d~----------~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g--------------- 138 (212)
T 3rjv_A 84 SKSGEIVLARVLVNRQAGATDV----------AHAITLLQDAARDSESDAAVDAQMLLGLIYASG--------------- 138 (212)
T ss_dssp CHHHHHHHHHHHTCGGGSSCCH----------HHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHT---------------
T ss_pred CHHHHHHHHHHHHcCCCCccCH----------HHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcC---------------
Confidence 99999999999865 3333 367899999999999 4699999999988762
Q ss_pred cCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHh-C-----CHHHHHHHHHHHhcCCC
Q psy9159 186 SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEA-G-----EYAKAVQWLDKAKAIPV 243 (259)
Q Consensus 186 ~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~-g-----~~~eA~~~~~kal~l~p 243 (259)
....+++++|+.+|++|+++ | .++.++++||.+|... | ++++|+++|++|++..+
T Consensus 139 -~g~~~d~~~A~~~~~~A~~~-~-~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 139 -VHGPEDDVKASEYFKGSSSL-S-RTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp -SSSSCCHHHHHHHHHHHHHT-S-CTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred -CCCCCCHHHHHHHHHHHHHc-C-CCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 11137899999999999999 5 4577899999999875 3 89999999999998753
No 125
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.61 E-value=3.3e-15 Score=106.59 Aligned_cols=108 Identities=19% Similarity=0.148 Sum_probs=100.5
Q ss_pred hCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcC
Q psy9159 108 LAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSD 187 (259)
Q Consensus 108 ~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~ 187 (259)
++|+++.++..+|.++...|++. .+...++++++++|+++.+++.+|.++...
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~----------------- 53 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGNYT----------ESIDLFEKAIQLDPEESKYWLMKGKALYNL----------------- 53 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCCHH----------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHT-----------------
T ss_pred CCCCcHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHhCcCCHHHHHHHHHHHHHc-----------------
Confidence 47999999999999999998887 567899999999999999999999998875
Q ss_pred CCCCcHHHHHHHHHHHHhhCCCC--cHHhHHHHHHHHHHh-CCHHHHHHHHHHHhcCCCCCc
Q psy9159 188 LDEPTAEDAIANCLKAEELAPAP--WKENQLLIAKCYIEA-GEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 188 ~~~g~~~eAi~~~~kAi~l~P~~--~~~~~~~la~~~~~~-g~~~eA~~~~~kal~l~p~~~ 246 (259)
|++++|+.+|+++++++| . ...++..+|.++..+ |++++|++++++++...|.++
T Consensus 54 ---~~~~~A~~~~~~a~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 54 ---ERYEEAVDCYNYVINVIE-DEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp ---TCHHHHHHHHHHHHHTSC-CTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred ---cCHHHHHHHHHHHHHhCc-ccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 889999999999999999 7 789999999999999 999999999999999999865
No 126
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.61 E-value=5.7e-15 Score=110.07 Aligned_cols=108 Identities=18% Similarity=0.264 Sum_probs=98.9
Q ss_pred HhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhc
Q psy9159 107 ELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVS 186 (259)
Q Consensus 107 ~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~ 186 (259)
..+|.++..+..+|.++...|++. .+...++++++++|+++.+|+.+|.++...
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~l~~~~~~~---------------- 56 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYP----------EAAACYGRAITRNPLVAVYYTNRALCYLKM---------------- 56 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----------------
T ss_pred CCccccHHHHHHHHHHHHHhCcHH----------HHHHHHHHHHhhCcCcHHHHHHHHHHHHHh----------------
Confidence 467889999999999999999987 567899999999999999999999999875
Q ss_pred CCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCC
Q psy9159 187 DLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 187 ~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~ 245 (259)
|++++|+.+|+++++++| +++.+++.+|.++..+|++++|++.|+++++++|++
T Consensus 57 ----~~~~~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 57 ----QQPEQALADCRRALELDG-QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp ----TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ----cCHHHHHHHHHHHHHhCc-hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 889999999999999999 789999999999999999999999999999999873
No 127
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.61 E-value=2.3e-16 Score=143.40 Aligned_cols=138 Identities=14% Similarity=0.150 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHH
Q psy9159 65 PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRD 144 (259)
Q Consensus 65 ~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~ 144 (259)
++.+..+|.++...|++ ++|++.++++++++|+++.++..+|.++...|++. +|..
T Consensus 6 a~~~~~lg~~~~~~g~~--------------~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~----------~A~~ 61 (477)
T 1wao_1 6 AEELKTQANDYFKAKDY--------------ENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYG----------YALG 61 (477)
T ss_dssp HTTSSSSSSSTTTTTCH--------------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH----------HHHH
T ss_pred HHHHHHHHHHHHHhCCH--------------HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHH----------HHHH
Confidence 34455566666666665 49999999999999999999999999999999987 5678
Q ss_pred HHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHH--H
Q psy9159 145 QMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKC--Y 222 (259)
Q Consensus 145 ~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~--~ 222 (259)
.+++|++++|+++.+++.+|.++... |++++|+++|++|++++| ++..++..++.+ +
T Consensus 62 ~~~~al~l~p~~~~~~~~lg~~~~~~--------------------g~~~eA~~~~~~al~~~p-~~~~~~~~l~~~~~~ 120 (477)
T 1wao_1 62 DATRAIELDKKYIKGYYRRAASNMAL--------------------GKFRAALRDYETVVKVKP-HDKDAKMKYQECNKI 120 (477)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHH--------------------TCHHHHHHHHHHHHHHST-TCTTHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHH
Confidence 99999999999999999999999886 889999999999999999 678889999998 8
Q ss_pred HHhCCHHHHHHHHH-----------HHhcCCCCCcc
Q psy9159 223 IEAGEYAKAVQWLD-----------KAKAIPVVSYE 247 (259)
Q Consensus 223 ~~~g~~~eA~~~~~-----------kal~l~p~~~~ 247 (259)
..+|++++|++.++ ++++++|....
T Consensus 121 ~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~ 156 (477)
T 1wao_1 121 VKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSG 156 (477)
T ss_dssp HHHHHHCCC------CCSTTTCCTTSSCCCCTTCCS
T ss_pred HHHHHHHHHhccccccchhHhhhhhhhccccccccc
Confidence 99999999999999 88888887654
No 128
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.60 E-value=7.1e-15 Score=109.53 Aligned_cols=115 Identities=15% Similarity=0.022 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHH
Q psy9159 63 NDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVF 142 (259)
Q Consensus 63 ~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a 142 (259)
+.+.++..+|.+++..|++. +|++.|++||+++|+++.+|.++|.++..+|++. .|
T Consensus 6 d~A~a~~~lG~~~~~~~~~~--------------~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~----------~A 61 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFE--------------KAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFA----------EC 61 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH----------HH
T ss_pred HHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHH----------HH
Confidence 34567788999999998875 9999999999999999999999999999999987 56
Q ss_pred HHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHH
Q psy9159 143 RDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQL 216 (259)
Q Consensus 143 ~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~ 216 (259)
+..++++|+++|++...+..+|.++..+|.. ... .|++++|+++|++++++.| + +....
T Consensus 62 ~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~---~~~----------~~~~~~A~~~~~kal~~~~-~-~~~~~ 120 (127)
T 4gcn_A 62 VQFCEKAVEVGRETRADYKLIAKAMSRAGNA---FQK----------QNDLSLAVQWFHRSLSEFR-D-PELVK 120 (127)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH---HHH----------TTCHHHHHHHHHHHHHHSC-C-HHHHH
T ss_pred HHHHHHHHHhCcccchhhHHHHHHHHHHHHH---HHH----------cCCHHHHHHHHHHHHhhCc-C-HHHHH
Confidence 7899999999999877655555555444321 000 3899999999999999999 4 44433
No 129
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.60 E-value=2.4e-14 Score=109.64 Aligned_cols=131 Identities=13% Similarity=0.029 Sum_probs=114.6
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA 109 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~ 109 (259)
.....+..++ .. |++++|+..+++++..+|+++.+++.+|.++...|++. +|+..++++++++
T Consensus 15 ~~~~~a~~~~--~~-~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~--------------~A~~~~~~a~~~~ 77 (166)
T 1a17_A 15 ELKTQANDYF--KA-KDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYG--------------YALGDATRAIELD 77 (166)
T ss_dssp HHHHHHHHHH--HT-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHH--Hc-cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhC
Confidence 3456666666 56 99999999999999999999999999999999999875 9999999999999
Q ss_pred CCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHH--HHHhhccchHHHHHHHHHhcC
Q psy9159 110 PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRY--QYEISKLSFFERKIAVLIVSD 187 (259)
Q Consensus 110 P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~--~~~~~~~~~~~~~~~~~~~~~ 187 (259)
|+++.++..+|.++...|++. .+...++++++++|++..++..++.. +...
T Consensus 78 ~~~~~~~~~~a~~~~~~~~~~----------~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~----------------- 130 (166)
T 1a17_A 78 KKYIKGYYRRAASNMALGKFR----------AALRDYETVVKVKPHDKDAKMKYQECNKIVKQ----------------- 130 (166)
T ss_dssp TTCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH-----------------
T ss_pred cccHHHHHHHHHHHHHhccHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-----------------
Confidence 999999999999999999887 56789999999999999998766665 4332
Q ss_pred CCCCcHHHHHHHHHHHHhhC
Q psy9159 188 LDEPTAEDAIANCLKAEELA 207 (259)
Q Consensus 188 ~~~g~~~eAi~~~~kAi~l~ 207 (259)
|++++|+.++.++.++.
T Consensus 131 ---~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 131 ---KAFERAIAGDEHKRSVV 147 (166)
T ss_dssp ---HHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHcccchHHHh
Confidence 77999999999887753
No 130
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.60 E-value=2.8e-14 Score=130.55 Aligned_cols=161 Identities=12% Similarity=0.020 Sum_probs=135.1
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHH-------hhchhcccCcHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHH
Q psy9159 48 AKAYNLTMELNNKQPNDPDVLYRLAKACHC-------LYDIKRRENDKEASEKYILQGIEYAKKAME-LAPNNSNTQKWY 119 (259)
Q Consensus 48 ~~A~~~~~~~~~~~p~~~~~~~~la~~~~~-------~g~~~~~~~~~~~~~~~~~~A~~~~~kal~-~~P~~~~~~~~l 119 (259)
++++..|++++..+|+++++|+.+|..+.. .|+.. ......++|+..+++|++ +.|+++.+|..+
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~-------~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~ 327 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMN-------NAKLFSDEAANIYERAISTLLKKNMLLYFAY 327 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCH-------HHHHHHHHHHHHHHHHTTTTCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchh-------hhhhhhHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 588899999999999999999999999886 45542 111123489999999997 899999999999
Q ss_pred HHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh-hHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHH
Q psy9159 120 GICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF-TLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIA 198 (259)
Q Consensus 120 a~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~-~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~ 198 (259)
+.++...|++. .+...|+++++++|+++ .+|..+|.++.+. |++++|+.
T Consensus 328 ~~~~~~~g~~~----------~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~--------------------~~~~~A~~ 377 (530)
T 2ooe_A 328 ADYEESRMKYE----------KVHSIYNRLLAIEDIDPTLVYIQYMKFARRA--------------------EGIKSGRM 377 (530)
T ss_dssp HHHHHHTTCHH----------HHHHHHHHHHHSSSSCHHHHHHHHHHHHHHH--------------------HHHHHHHH
T ss_pred HHHHHhcCCHH----------HHHHHHHHHhCccccCchHHHHHHHHHHHHh--------------------cCHHHHHH
Confidence 99998888876 56789999999999996 6999999987664 67899999
Q ss_pred HHHHHHhhCCCCcHHhHHHHHHH-HHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 199 NCLKAEELAPAPWKENQLLIAKC-YIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 199 ~~~kAi~l~P~~~~~~~~~la~~-~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
.|++|++..| .....+...+.+ +...|++++|...|+++++..|+++
T Consensus 378 ~~~~Al~~~~-~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~ 425 (530)
T 2ooe_A 378 IFKKAREDAR-TRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIP 425 (530)
T ss_dssp HHHHHHTCTT-CCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHhccC-CchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCH
Confidence 9999999988 556666655544 4469999999999999999998765
No 131
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.60 E-value=1.9e-14 Score=110.89 Aligned_cols=117 Identities=12% Similarity=0.039 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
+.+++|+..++++++.+|+++++|+++|.++..++++. ...+.++.+++|+..|++||+++|+++.+|+.+|.++.
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~----~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFH----SISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccc----hhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999874 34457778999999999999999999999999999999
Q ss_pred Hhhchhh-HHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHH
Q psy9159 125 ANGQFQS-LKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGR 165 (259)
Q Consensus 125 ~~~~~~~-~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~ 165 (259)
.+|.+.. .....+...+|+++|++||+++|++..++..+..
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~ 133 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM 133 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 8863210 0111233447889999999999999866666543
No 132
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.60 E-value=1e-14 Score=107.79 Aligned_cols=102 Identities=13% Similarity=0.074 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHH
Q psy9159 66 DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQ 145 (259)
Q Consensus 66 ~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~ 145 (259)
+.++.+|.++...|++. +|+..++++++++|+++.+|+.+|.++...|++. .|+..
T Consensus 18 ~~~~~~g~~~~~~g~~~--------------~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~----------~A~~~ 73 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLA--------------EAALAFEAVCQKEPEREEAWRSLGLTQAENEKDG----------LAIIA 73 (121)
T ss_dssp SCHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH----------HHHHH
T ss_pred hhHHHHHHHHHHcCCHH--------------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHH----------HHHHH
Confidence 34688999999999875 9999999999999999999999999999999887 57789
Q ss_pred HHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcH
Q psy9159 146 MNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWK 212 (259)
Q Consensus 146 ~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~ 212 (259)
++++++++|+++.+++.+|.++... |++++|+.+|+++++++| ++.
T Consensus 74 ~~~al~l~P~~~~~~~~la~~~~~~--------------------g~~~~A~~~~~~al~~~P-~~~ 119 (121)
T 1hxi_A 74 LNHARMLDPKDIAVHAALAVSHTNE--------------------HNANAALASLRAWLLSQP-QYE 119 (121)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHC-------
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCc-CCC
Confidence 9999999999999999999999886 779999999999999999 543
No 133
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.60 E-value=2e-14 Score=132.69 Aligned_cols=143 Identities=15% Similarity=0.142 Sum_probs=127.3
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
...+..+. .. |++++|+..++++++.+|+++.+++.+|.+|...|++. +|+..++++++++|+
T Consensus 27 ~~lg~~~~--~~-g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al~~~p~ 89 (568)
T 2vsy_A 27 LMLADAEL--GM-GDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHA--------------EAAVLLQQASDAAPE 89 (568)
T ss_dssp HHHHHHHH--HH-TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTT
T ss_pred HHHHHHHH--Hc-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHhcCCC
Confidence 34455555 55 99999999999999999999999999999999999875 999999999999999
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCC
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEP 191 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g 191 (259)
++.++..+|.++...|++. +|.+.++++++++|+++.++..+|.++...++. |
T Consensus 90 ~~~~~~~la~~~~~~g~~~----------~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~-----------------g 142 (568)
T 2vsy_A 90 HPGIALWLGHALEDAGQAE----------AAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDW-----------------R 142 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC-----------------T
T ss_pred CHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcc-----------------c
Confidence 9999999999999999887 567899999999999999999999999875332 7
Q ss_pred cHHHHHHHHHHHHhhCCCCcHHhHHHHH
Q psy9159 192 TAEDAIANCLKAEELAPAPWKENQLLIA 219 (259)
Q Consensus 192 ~~~eAi~~~~kAi~l~P~~~~~~~~~la 219 (259)
++++|+.+|+++++.+| .....+..++
T Consensus 143 ~~~~A~~~~~~al~~~p-~~~~~~~~l~ 169 (568)
T 2vsy_A 143 ALDVLSAQVRAAVAQGV-GAVEPFAFLS 169 (568)
T ss_dssp THHHHHHHHHHHHHHTC-CCSCHHHHTT
T ss_pred cHHHHHHHHHHHHhcCC-cccChHHHhC
Confidence 89999999999999999 6666666666
No 134
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.59 E-value=3.9e-14 Score=121.39 Aligned_cols=155 Identities=8% Similarity=-0.016 Sum_probs=109.5
Q ss_pred hHHHHHhhcCCcC--CHHHHHHHHHHHhhcCCCCHHHHHHHHHHH----HHhhchhcccCcHHHHHHHHHHHHHHHHHHH
Q psy9159 33 PEIDRLLYYGKKD--DKAKAYNLTMELNNKQPNDPDVLYRLAKAC----HCLYDIKRRENDKEASEKYILQGIEYAKKAM 106 (259)
Q Consensus 33 ~~~~~l~~~~~~~--~~~~A~~~~~~~~~~~p~~~~~~~~la~~~----~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal 106 (259)
.++..+. .. | ++++++..+..++..+|++..+|+..+.++ ...+.. ..++++++.+.+++
T Consensus 72 ~R~~~L~--~l-~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~-----------~~~~~EL~~~~~~l 137 (306)
T 3dra_A 72 YRFNILK--NL-PNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNND-----------FDPYREFDILEAML 137 (306)
T ss_dssp HHHHHHH--TC-TTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTC-----------CCTHHHHHHHHHHH
T ss_pred HHHHHHH--Hc-ccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhcccc-----------CCHHHHHHHHHHHH
Confidence 4444454 44 6 999999999999999999999999999999 444210 01358999999999
Q ss_pred HhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhc
Q psy9159 107 ELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVS 186 (259)
Q Consensus 107 ~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~ 186 (259)
+++|.|..+|.+.++++..++.+.. ....+.++++|++||.|..+|+.+|.+....+...
T Consensus 138 ~~~pkny~aW~~R~~vl~~l~~~~~--------~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~------------ 197 (306)
T 3dra_A 138 SSDPKNHHVWSYRKWLVDTFDLHND--------AKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLA------------ 197 (306)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCTTC--------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGC------------
T ss_pred HhCCCCHHHHHHHHHHHHHhcccCh--------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccc------------
Confidence 9999999999999999998887641 13457788999999999999999988776543200
Q ss_pred CCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHH
Q psy9159 187 DLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIE 224 (259)
Q Consensus 187 ~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~ 224 (259)
....++++++++++++.++| ++..+|.+++.++..
T Consensus 198 --~~~~~~eEl~~~~~aI~~~p-~n~SaW~y~~~ll~~ 232 (306)
T 3dra_A 198 --TDNTIDEELNYVKDKIVKCP-QNPSTWNYLLGIHER 232 (306)
T ss_dssp --CHHHHHHHHHHHHHHHHHCS-SCHHHHHHHHHHHHH
T ss_pred --hhhhHHHHHHHHHHHHHhCC-CCccHHHHHHHHHHh
Confidence 00014555555555555555 444444444444433
No 135
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.59 E-value=1e-14 Score=112.55 Aligned_cols=120 Identities=9% Similarity=0.003 Sum_probs=90.7
Q ss_pred CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh------------------CCCChHHHHHHHHHHHH
Q psy9159 64 DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL------------------APNNSNTQKWYGICVGA 125 (259)
Q Consensus 64 ~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~------------------~P~~~~~~~~la~~~~~ 125 (259)
.+..+..+|..++..|++. +|+..|++++.+ +|.++.++.++|.++..
T Consensus 10 ~a~~~~~~G~~~~~~~~~~--------------~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~ 75 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYK--------------EAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN 75 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3577888999999988875 999999999999 66666777777777777
Q ss_pred hhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHh
Q psy9159 126 NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEE 205 (259)
Q Consensus 126 ~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~ 205 (259)
.|++. .|...++++|+++|+++.+|+.+|.++..+ |++++|+.+|+++++
T Consensus 76 ~~~~~----------~A~~~~~~al~~~p~~~~a~~~~g~~~~~~--------------------g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 76 IGDLH----------EAEETSSEVLKREETNEKALFRRAKARIAA--------------------WKLDEAEEDLKLLLR 125 (162)
T ss_dssp HTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHH
T ss_pred cCcHH----------HHHHHHHHHHhcCCcchHHHHHHHHHHHHH--------------------hcHHHHHHHHHHHHh
Confidence 77766 456777777888888888888888777664 677888888888888
Q ss_pred hCCCCcH-HhHHHHHHHHHHhCCH
Q psy9159 206 LAPAPWK-ENQLLIAKCYIEAGEY 228 (259)
Q Consensus 206 l~P~~~~-~~~~~la~~~~~~g~~ 228 (259)
++| ++. .+...++.+....++.
T Consensus 126 l~p-~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 126 NHP-AAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp HCG-GGHHHHHHHHHHHHHHHHHH
T ss_pred cCC-CCHHHHHHHHHHHHHHHHHH
Confidence 888 555 5566666666555443
No 136
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.58 E-value=9.4e-14 Score=99.71 Aligned_cols=114 Identities=13% Similarity=0.062 Sum_probs=103.8
Q ss_pred CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHH
Q psy9159 64 DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFR 143 (259)
Q Consensus 64 ~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~ 143 (259)
.++.++.+|.++...|++. +|+..+++++..+|+++.++..+|.++...|++. .+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----------~A~ 58 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNID--------------DALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQ----------KAY 58 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH----------HHH
T ss_pred hHHHHHHHHHHHHHcccHH--------------HHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHH----------HHH
Confidence 4678899999999999875 9999999999999999999999999999998887 567
Q ss_pred HHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHH
Q psy9159 144 DQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCY 222 (259)
Q Consensus 144 ~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~ 222 (259)
..++++++++|+++.+++.+|.++... |++++|+.+|+++++++| ++..++..++.+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~a~~~~~~--------------------~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~ 116 (118)
T 1elw_A 59 EDGCKTVDLKPDWGKGYSRKAAALEFL--------------------NRFEEAKRTYEEGLKHEA-NNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHTTCT-TCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHH--------------------hhHHHHHHHHHHHHHcCC-CCHHHHHHHHHhh
Confidence 899999999999999999999998875 889999999999999999 7788888888765
No 137
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.58 E-value=3e-15 Score=126.22 Aligned_cols=188 Identities=11% Similarity=0.063 Sum_probs=147.4
Q ss_pred CcCCHHHHHHHHHHHhhcCCCCHHHHHHH-------HHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHH
Q psy9159 43 KKDDKAKAYNLTMELNNKQPNDPDVLYRL-------AKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNT 115 (259)
Q Consensus 43 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~l-------a~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~ 115 (259)
. +++.+|.+.|.+++..+|+.+++|..+ +.++..+++.. +++..+++++.+.|+...+
T Consensus 19 ~-~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~--------------~a~~~~~~~l~l~p~~l~a 83 (282)
T 4f3v_A 19 P-MSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSR--------------RNFGQLSGSVQISMSTLNA 83 (282)
T ss_dssp T-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTG--------------GGTTHHHHTTTCCGGGGCC
T ss_pred C-CCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHH--------------HHHHHHHHHhcCChhhhhh
Confidence 5 899999999999999999999999999 78888877765 8899999999999997777
Q ss_pred HHH---------------------HHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccc
Q psy9159 116 QKW---------------------YGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174 (259)
Q Consensus 116 ~~~---------------------la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~ 174 (259)
++. ++.++...|++. +|.+.++.++..+|.+. +++.+|.++++.++.+
T Consensus 84 ~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~----------eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~ 152 (282)
T 4f3v_A 84 RIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYA----------DAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWT 152 (282)
T ss_dssp EEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHH----------HHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHH
T ss_pred hhccCCcccccccccCCHhHHHHHHHHHHHHCCCHH----------HHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHH
Confidence 666 677788888877 45677777777888777 8888888777766543
Q ss_pred hHHHHHH--------------HHHhcC--CCCCcHHHHHHHHHHHHhhC--CCCcHHhHHHHHHHHHHhCCHHHHHHHHH
Q psy9159 175 FFERKIA--------------VLIVSD--LDEPTAEDAIANCLKAEELA--PAPWKENQLLIAKCYIEAGEYAKAVQWLD 236 (259)
Q Consensus 175 ~~~~~~~--------------~~~~~~--~~~g~~~eAi~~~~kAi~l~--P~~~~~~~~~la~~~~~~g~~~eA~~~~~ 236 (259)
.....+. ....|. -..|++++|+.+|++++... |.....+++++|.|+..+|+.++|...|+
T Consensus 153 dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~ 232 (282)
T 4f3v_A 153 DVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLE 232 (282)
T ss_dssp HHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 2222111 000000 11599999999999999755 62266789999999999999999999999
Q ss_pred HHhcCCCCCccchhhhhhhcc
Q psy9159 237 KAKAIPVVSYESHDLSTTYSY 257 (259)
Q Consensus 237 kal~l~p~~~~~~~~~~~~~~ 257 (259)
++++.+|+ ++-...+.+-+|
T Consensus 233 ~a~a~~P~-~~~~~aL~~~~~ 252 (282)
T 4f3v_A 233 WLQTTHPE-PKVAAALKDPSY 252 (282)
T ss_dssp HHHHHSCC-HHHHHHHHCTTC
T ss_pred HHHhcCCc-HHHHHHHhCCCC
Confidence 99999998 776666665554
No 138
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.58 E-value=1.7e-15 Score=140.38 Aligned_cols=170 Identities=6% Similarity=-0.077 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q psy9159 47 KAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGAN 126 (259)
Q Consensus 47 ~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~ 126 (259)
+++++..+.++++.+|++..+|+..+.++..++... ++++++.+.++++++|.|..+|.+.++++...
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~------------~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l 156 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN------------WARELELCARFLEADERNFHCWDYRRFVAAQA 156 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCC------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccccc------------HHHHHHHHHHHHhhccccccHHHHHHHHHHHc
Confidence 999999999999999999999999999999998431 34999999999999999999999999999988
Q ss_pred h-chhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHh
Q psy9159 127 G-QFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEE 205 (259)
Q Consensus 127 ~-~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~ 205 (259)
+ .++ .+.++++++|+++|.|..+|+.+|.++..+........ -+....+++++|++++.+|+.
T Consensus 157 ~~~~~----------~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~------~~~~~~~~~~eel~~~~~ai~ 220 (567)
T 1dce_A 157 AVAPA----------EELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGP------QGRLPENVLLKELELVQNAFF 220 (567)
T ss_dssp CCCHH----------HHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSS------CCSSCHHHHHHHHHHHHHHHH
T ss_pred CCChH----------HHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccc------cccccHHHHHHHHHHHHHHHh
Confidence 7 443 46788999999999999999999998877522100000 000012568999999999999
Q ss_pred hCCCCcHHhHHHHHHHHHHhCCHHH------------HHHHHHHHhcCCCCC
Q psy9159 206 LAPAPWKENQLLIAKCYIEAGEYAK------------AVQWLDKAKAIPVVS 245 (259)
Q Consensus 206 l~P~~~~~~~~~la~~~~~~g~~~e------------A~~~~~kal~l~p~~ 245 (259)
++| ++..+|++++.++...+++++ |+..|++++.++|.+
T Consensus 221 ~~P-~~~saW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~~~~ 271 (567)
T 1dce_A 221 TDP-NDQSAWFYHRWLLGRAEPHDVLCCVHVSREEACLSVCFSRPLTVGSRM 271 (567)
T ss_dssp HCS-SCSHHHHHHHHHHSCCCCCSCEEEEEEETTTTEEEEEEEEEECTTBTT
T ss_pred hCC-CCccHHHHHHHHHhcCCCccceeeeeeccCCceEEEEeccceeccccc
Confidence 999 778999999999999999777 677799999999874
No 139
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.57 E-value=1.2e-15 Score=132.48 Aligned_cols=143 Identities=11% Similarity=0.015 Sum_probs=91.0
Q ss_pred cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh-----------------HHHHHHHHH
Q psy9159 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS-----------------NTQKWYGIC 122 (259)
Q Consensus 60 ~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~-----------------~~~~~la~~ 122 (259)
..|+.+..+..+|.+++..|++. +|+..|++++++.|++. .++.++|.+
T Consensus 174 ~~~~~a~~~~~~g~~~~~~g~~~--------------~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~ 239 (338)
T 2if4_A 174 ERIGAADRRKMDGNSLFKEEKLE--------------EAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAAC 239 (338)
T ss_dssp HHHHHHHHHHHHHHHTCSSSCCH--------------HHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHH--------------HHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHH
Confidence 34555778888999999888875 99999999999999987 488999999
Q ss_pred HHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHH
Q psy9159 123 VGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLK 202 (259)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~k 202 (259)
+...+++. .|+..++++|+++|+++.+|+.+|.++..+ |++++|+.+|++
T Consensus 240 ~~~~g~~~----------~A~~~~~~al~~~p~~~~a~~~lg~a~~~~--------------------g~~~~A~~~l~~ 289 (338)
T 2if4_A 240 LIKLKRYD----------EAIGHCNIVLTEEEKNPKALFRRGKAKAEL--------------------GQMDSARDDFRK 289 (338)
T ss_dssp HHTTTCCH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHTT--------------------TCHHHHHHHHHH
T ss_pred HHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHH
Confidence 99999887 567899999999999999999999998774 889999999999
Q ss_pred HHhhCCCCcHHhHHHHHHH-HHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 203 AEELAPAPWKENQLLIAKC-YIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 203 Ai~l~P~~~~~~~~~la~~-~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
+++++| ++..++..|+.+ ....++.+++...|++++..+|.++.
T Consensus 290 al~l~p-~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 290 AQKYAP-DDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp TTC-------------------------------------------
T ss_pred HHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 999999 778999999988 44557788999999999999998764
No 140
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.57 E-value=4.3e-14 Score=114.42 Aligned_cols=154 Identities=14% Similarity=0.050 Sum_probs=125.7
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhh
Q psy9159 48 AKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANG 127 (259)
Q Consensus 48 ~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~ 127 (259)
.+|+..|+++.+. .++++++.+|.+|...+++. +|+.+++++++. +++.+++.+|.++.. +
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~~~--------------~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~ 63 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGDYQ--------------KAEYWAQKAAAQ--GDGDALALLAQLKIR-N 63 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHT--TCHHHHHHHHHHTTS-S
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCHH--------------HHHHHHHHHHHc--CCHHHHHHHHHHHHc-C
Confidence 3678889998875 88999999999999988765 999999999875 689999999999876 4
Q ss_pred chhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhC
Q psy9159 128 QFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELA 207 (259)
Q Consensus 128 ~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~ 207 (259)
... .+..++...+++| .++.++.+++.||.+|..- ....+++++|+.+|++|++..
T Consensus 64 g~~------~~~~~A~~~~~~A--~~~g~~~a~~~Lg~~y~~g----------------~g~~~d~~~A~~~~~~A~~~~ 119 (212)
T 3rjv_A 64 PQQ------ADYPQARQLAEKA--VEAGSKSGEIVLARVLVNR----------------QAGATDVAHAITLLQDAARDS 119 (212)
T ss_dssp TTS------CCHHHHHHHHHHH--HHTTCHHHHHHHHHHHTCG----------------GGSSCCHHHHHHHHHHHTSST
T ss_pred CCC------CCHHHHHHHHHHH--HHCCCHHHHHHHHHHHHcC----------------CCCccCHHHHHHHHHHHHHcC
Confidence 111 1222678899999 4578999999999988541 111378999999999999998
Q ss_pred CCC--cHHhHHHHHHHHHH----hCCHHHHHHHHHHHhcCCCCCc
Q psy9159 208 PAP--WKENQLLIAKCYIE----AGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 208 P~~--~~~~~~~la~~~~~----~g~~~eA~~~~~kal~l~p~~~ 246 (259)
| . ++.++++||.+|.. .+++++|+++|++++++ |.++
T Consensus 120 ~-~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~ 162 (212)
T 3rjv_A 120 E-SDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG 162 (212)
T ss_dssp T-SHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT
T ss_pred C-CcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH
Confidence 7 3 37899999999999 89999999999999998 4444
No 141
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.56 E-value=1e-14 Score=127.13 Aligned_cols=195 Identities=13% Similarity=0.036 Sum_probs=138.3
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCC------HHHHHHHHHHHHHhhchhcc------cCcHHHHHHHHHHHHHHHHHHHHh-
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPND------PDVLYRLAKACHCLYDIKRR------ENDKEASEKYILQGIEYAKKAMEL- 108 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~------~~~~~~la~~~~~~g~~~~~------~~~~~~~~~~~~~A~~~~~kal~~- 108 (259)
.. |++++|+..+++++...|.. +.++..+|.+|...|+.... .....+....+++|+.++++++++
T Consensus 99 ~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~ 177 (406)
T 3sf4_A 99 VL-GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLV 177 (406)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hc-CCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 45 99999999999998876654 45888899999888871100 001124455577999999999887
Q ss_pred -----CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChh------HHHHHHHHHHHhhccchHH
Q psy9159 109 -----APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFT------LYSLKGRYQYEISKLSFFE 177 (259)
Q Consensus 109 -----~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~------~~~~lG~~~~~~~~~~~~~ 177 (259)
.|....++..+|.++...|++. .+...+++++++.|+... ++..+|.++...++.....
T Consensus 178 ~~~~~~~~~~~~~~~la~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 247 (406)
T 3sf4_A 178 TALGDRAAQGRAFGNLGNTHYLLGNFR----------DAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETAS 247 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHTBHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhccCcHHHHHHHHHHHHHHHHccCHH----------HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHH
Confidence 4555667888899998888887 467888888888777665 8999999998877653222
Q ss_pred HHHHHHH----------------h--c--CCCCCcHHHHHHHHHHHHhhCCCCc------HHhHHHHHHHHHHhCCHHHH
Q psy9159 178 RKIAVLI----------------V--S--DLDEPTAEDAIANCLKAEELAPAPW------KENQLLIAKCYIEAGEYAKA 231 (259)
Q Consensus 178 ~~~~~~~----------------~--~--~~~~g~~~eAi~~~~kAi~l~P~~~------~~~~~~la~~~~~~g~~~eA 231 (259)
..+..++ . + ....|++++|+.+|++++++.| .. ..++..+|.+|..+|++++|
T Consensus 248 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A 326 (406)
T 3sf4_A 248 EYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ-ELNDRIGEGRACWSLGNAYTALGNHDQA 326 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH-hcCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1111100 0 0 0125888888888888888765 22 45688888888888888888
Q ss_pred HHHHHHHhcCCCCCccc
Q psy9159 232 VQWLDKAKAIPVVSYES 248 (259)
Q Consensus 232 ~~~~~kal~l~p~~~~~ 248 (259)
++++++++++.+...+.
T Consensus 327 ~~~~~~al~~~~~~~~~ 343 (406)
T 3sf4_A 327 MHFAEKHLEISREVGDK 343 (406)
T ss_dssp HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 88888888877555433
No 142
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=5.6e-14 Score=105.47 Aligned_cols=119 Identities=12% Similarity=0.070 Sum_probs=84.2
Q ss_pred hcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHhhchhhHHHH
Q psy9159 59 NKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN---SNTQKWYGICVGANGQFQSLKEK 135 (259)
Q Consensus 59 ~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~---~~~~~~la~~~~~~~~~~~~~~~ 135 (259)
..+|.++..++.+|..+...|++. +|+..++++++++|++ +.++..+|.++...+++.
T Consensus 22 ~~~~~~~~~~~~~a~~~~~~~~~~--------------~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~----- 82 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFKCGDYG--------------GALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYD----- 82 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHTTTCHH--------------HHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHH-----
T ss_pred ccchHHHHHHHHHHHHHHHhCCHH--------------HHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHH-----
Confidence 345677777777777777777764 7777777777777776 677777777777776665
Q ss_pred HhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhH
Q psy9159 136 IKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQ 215 (259)
Q Consensus 136 ~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~ 215 (259)
++...++++++++|+++.+++.+|.++... |++++|+.+|+++++++| ++..++
T Consensus 83 -----~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~--------------------~~~~~A~~~~~~al~~~p-~~~~~~ 136 (148)
T 2dba_A 83 -----KAETEASKAIEKDGGDVKALYRRSQALEKL--------------------GRLDQAVLDLQRCVSLEP-KNKVFQ 136 (148)
T ss_dssp -----HHHHHHHHHHHHTSCCHHHHHHHHHHHHHH--------------------TCHHHHHHHHHHHHHHCS-SCHHHH
T ss_pred -----HHHHHHHHHHhhCccCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHcCC-CcHHHH
Confidence 455677777777777777777777777664 667777777777777777 556666
Q ss_pred HHHHHHH
Q psy9159 216 LLIAKCY 222 (259)
Q Consensus 216 ~~la~~~ 222 (259)
..++.+.
T Consensus 137 ~~l~~~~ 143 (148)
T 2dba_A 137 EALRNIS 143 (148)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555543
No 143
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.56 E-value=1.3e-14 Score=111.92 Aligned_cols=113 Identities=11% Similarity=0.071 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC-------ChH-----HHHHHHHHHHHhhchhhH
Q psy9159 65 PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN-------NSN-----TQKWYGICVGANGQFQSL 132 (259)
Q Consensus 65 ~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~-------~~~-----~~~~la~~~~~~~~~~~~ 132 (259)
.+.+..+|..++..|++. +|+..|++||+++|+ +.. +|.++|.++..+|++..
T Consensus 11 a~~~~~~G~~l~~~g~~e--------------eAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~e- 75 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYD--------------EAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDE- 75 (159)
T ss_dssp HHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHH-
T ss_pred HHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHH-
Confidence 466788889999888875 999999999999999 444 99999999999999984
Q ss_pred HHHHhcHHHHHHHHHHHHcc-------CCCChhHH----HHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHH
Q psy9159 133 KEKIKCGVVFRDQMNKAIQM-------APKDFTLY----SLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCL 201 (259)
Q Consensus 133 ~~~~~~~~~a~~~~~kAl~l-------~P~~~~~~----~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~ 201 (259)
++..+++||++ +|+++.+| +.+|.++..+ |++++|+.+|+
T Consensus 76 ---------Al~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~l--------------------gr~eEAl~~y~ 126 (159)
T 2hr2_A 76 ---------ALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGL--------------------GRGAEAMPEFK 126 (159)
T ss_dssp ---------HHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHT--------------------TCHHHHHHHHH
T ss_pred ---------HHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHC--------------------CCHHHHHHHHH
Confidence 44555566655 99999999 9999999875 88999999999
Q ss_pred HHHhhCCCCcHHhHHHHHHHH
Q psy9159 202 KAEELAPAPWKENQLLIAKCY 222 (259)
Q Consensus 202 kAi~l~P~~~~~~~~~la~~~ 222 (259)
+|++++| ....+.-.+..+.
T Consensus 127 kAlel~p-~d~~~~~~~~~~~ 146 (159)
T 2hr2_A 127 KVVEMIE-ERKGETPGKERMM 146 (159)
T ss_dssp HHHHHHH-HCCSCCTTHHHHH
T ss_pred HHHhcCC-CcHHHHHHHHHHH
Confidence 9999999 4555544444443
No 144
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.56 E-value=4.2e-15 Score=118.60 Aligned_cols=123 Identities=10% Similarity=-0.095 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh----------------hH
Q psy9159 96 LQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF----------------TL 159 (259)
Q Consensus 96 ~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~----------------~~ 159 (259)
+++.+.+.......+..+..+..+|.++...+++. .|...|++++++.|+++ .+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (198)
T 2fbn_A 21 GAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEIN----------EAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISC 90 (198)
T ss_dssp -CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHH
T ss_pred cccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 35666666666666677788888999999998887 56789999999999998 89
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHh
Q psy9159 160 YSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAK 239 (259)
Q Consensus 160 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal 239 (259)
++.+|.++... |++++|+.+++++++++| ++..+++.+|.+|..+|++++|+++|++++
T Consensus 91 ~~~la~~~~~~--------------------~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 149 (198)
T 2fbn_A 91 NLNLATCYNKN--------------------KDYPKAIDHASKVLKIDK-NNVKALYKLGVANMYFGFLEEAKENLYKAA 149 (198)
T ss_dssp HHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh--------------------cCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 99999998875 889999999999999999 789999999999999999999999999999
Q ss_pred cCCCCCccch
Q psy9159 240 AIPVVSYESH 249 (259)
Q Consensus 240 ~l~p~~~~~~ 249 (259)
+++|.+++-.
T Consensus 150 ~~~p~~~~~~ 159 (198)
T 2fbn_A 150 SLNPNNLDIR 159 (198)
T ss_dssp HHSTTCHHHH
T ss_pred HHCCCcHHHH
Confidence 9999876543
No 145
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.55 E-value=4e-14 Score=104.17 Aligned_cols=108 Identities=21% Similarity=0.237 Sum_probs=99.2
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
.|.++.++..+|.++...+++. .+...++++++++|+++.+++.+|.++...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~la~~~~~~------------------ 63 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYP----------QAMKHYTEAIKRNPKDAKLYSNRAACYTKL------------------ 63 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSH----------HHHHHHHHHHTTCTTCHHHHHHHHHHHTTT------------------
T ss_pred CcccHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHcCCCcHHHHHHHHHHHHHh------------------
Confidence 4778889999999999999887 567899999999999999999999988664
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 189 DEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|++++|+.+|+++++++| .+..++..+|.++..+|++++|+++++++++++|.+.+
T Consensus 64 --~~~~~A~~~~~~a~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~ 119 (133)
T 2lni_A 64 --LEFQLALKDCEECIQLEP-TFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKE 119 (133)
T ss_dssp --TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTH
T ss_pred --ccHHHHHHHHHHHHHhCC-CchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchH
Confidence 889999999999999999 77899999999999999999999999999999987654
No 146
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.55 E-value=1.2e-13 Score=99.12 Aligned_cols=106 Identities=16% Similarity=0.125 Sum_probs=96.3
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCC
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEP 191 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g 191 (259)
.+..+..+|.++...|++. .+...++++++++|+++.++..+|.++... |
T Consensus 3 ~~~~~~~~~~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~--------------------~ 52 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNID----------DALQCYSEAIKLDPHNHVLYSNRSAAYAKK--------------------G 52 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH--------------------T
T ss_pred hHHHHHHHHHHHHHcccHH----------HHHHHHHHHHHHCCCcHHHHHHHHHHHHhh--------------------c
Confidence 4567788899988888887 567899999999999999999999999875 7
Q ss_pred cHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 192 TAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 192 ~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
++++|+.+++++++++| .+..++..+|.++..+|++++|++.++++++++|.++..
T Consensus 53 ~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 108 (118)
T 1elw_A 53 DYQKAYEDGCKTVDLKP-DWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQL 108 (118)
T ss_dssp CHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred cHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHH
Confidence 89999999999999999 779999999999999999999999999999999987653
No 147
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=8.4e-14 Score=104.48 Aligned_cols=115 Identities=10% Similarity=0.010 Sum_probs=103.9
Q ss_pred HhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC---hhHHHHHHHHHHHhhccchHHHHHHHH
Q psy9159 107 ELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD---FTLYSLKGRYQYEISKLSFFERKIAVL 183 (259)
Q Consensus 107 ~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~---~~~~~~lG~~~~~~~~~~~~~~~~~~~ 183 (259)
..+|+++..+..+|..+...+++. .+...++++++++|++ ..+++.+|.++...
T Consensus 22 ~~~~~~~~~~~~~a~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~------------- 78 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFKCGDYG----------GALAAYTQALGLDATPQDQAVLHRNRAACHLKL------------- 78 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHTTTCHH----------HHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHT-------------
T ss_pred ccchHHHHHHHHHHHHHHHhCCHH----------HHHHHHHHHHHHcccchHHHHHHHHHHHHHHHH-------------
Confidence 467889999999999999999887 5678999999999998 89999999998875
Q ss_pred HhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhhh
Q psy9159 184 IVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 184 ~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~ 252 (259)
|++++|+.+++++++++| ++..+++.+|.++..+|++++|+++++++++++|.+.+-...+
T Consensus 79 -------~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 139 (148)
T 2dba_A 79 -------EDYDKAETEASKAIEKDG-GDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEAL 139 (148)
T ss_dssp -------TCHHHHHHHHHHHHHHTS-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred -------ccHHHHHHHHHHHHhhCc-cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 889999999999999999 7799999999999999999999999999999999887655443
No 148
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.54 E-value=4.4e-15 Score=130.44 Aligned_cols=187 Identities=12% Similarity=0.072 Sum_probs=142.9
Q ss_pred CCcCCHHHHHHHHHHHhhc------CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh------C
Q psy9159 42 GKKDDKAKAYNLTMELNNK------QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL------A 109 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~------~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~------~ 109 (259)
.. |++++|+..+++++.. .|..+.++..+|.+|...|++. +|+..+++++++ .
T Consensus 98 ~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al~~~~~~~~~ 162 (411)
T 4a1s_A 98 YL-GDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFD--------------EAAICCERHLTLARQLGDR 162 (411)
T ss_dssp HH-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHHTCH
T ss_pred HC-CCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHHHHHHhhch
Confidence 45 9999999999999987 6888899999999999999875 899999999888 6
Q ss_pred CCChHHHHHHHHHHHHhhc----------hhhHHHHHhcHHHHHHHHHHHHccC------CCChhHHHHHHHHHHHhhcc
Q psy9159 110 PNNSNTQKWYGICVGANGQ----------FQSLKEKIKCGVVFRDQMNKAIQMA------PKDFTLYSLKGRYQYEISKL 173 (259)
Q Consensus 110 P~~~~~~~~la~~~~~~~~----------~~~~~~~~~~~~~a~~~~~kAl~l~------P~~~~~~~~lG~~~~~~~~~ 173 (259)
|....++..+|.++...|+ ...+... ...+...+++++++. |....++..+|.++...++.
T Consensus 163 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 239 (411)
T 4a1s_A 163 LSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA---LTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDF 239 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH---HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCh
Confidence 7778889999999999988 2222111 224566777776653 34456888999988888775
Q ss_pred chH----HHHHHH------------HHh--c--CCCCCcHHHHHHHHHHHHhhCCCCc------HHhHHHHHHHHHHhCC
Q psy9159 174 SFF----ERKIAV------------LIV--S--DLDEPTAEDAIANCLKAEELAPAPW------KENQLLIAKCYIEAGE 227 (259)
Q Consensus 174 ~~~----~~~~~~------------~~~--~--~~~~g~~~eAi~~~~kAi~l~P~~~------~~~~~~la~~~~~~g~ 227 (259)
+.. .+++.. .+. + ....|++++|+.+|++++++.| .. ..++..+|.++..+|+
T Consensus 240 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~la~~~~~~g~ 318 (411)
T 4a1s_A 240 QAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV-ELGEREVEAQSCYSLGNTYTLLHE 318 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCC
Confidence 422 222110 000 0 1236999999999999999987 33 5679999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcc
Q psy9159 228 YAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 228 ~~eA~~~~~kal~l~p~~~~ 247 (259)
+++|++++++++++.+...+
T Consensus 319 ~~~A~~~~~~al~~~~~~~~ 338 (411)
T 4a1s_A 319 FNTAIEYHNRHLAIAQELGD 338 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHCCC
Confidence 99999999999998765543
No 149
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.54 E-value=4.6e-14 Score=111.77 Aligned_cols=158 Identities=10% Similarity=-0.020 Sum_probs=124.4
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH------hCCCChHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME------LAPNNSNT 115 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~------~~P~~~~~ 115 (259)
.. |++++|...++......+..+.++..+|.++...|++. +|+..++++++ ..|..+.+
T Consensus 4 ~~-g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al~~~~~~~~~~~~~~~ 68 (203)
T 3gw4_A 4 EA-HDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFD--------------EARASFQALQQQAQKSGDHTAEHRA 68 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred cc-ccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHH--------------HHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 45 99999999655555544478899999999999999875 89999999988 55667778
Q ss_pred HHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHcc---CCC----ChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 116 QKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQM---APK----DFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 116 ~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l---~P~----~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
+..+|.++...|++. .+...+++++++ .|+ ...++..+|.++...
T Consensus 69 ~~~l~~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~------------------ 120 (203)
T 3gw4_A 69 LHQVGMVERMAGNWD----------AARRCFLEERELLASLPEDPLAASANAYEVATVALHF------------------ 120 (203)
T ss_dssp HHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHh------------------
Confidence 889999999999887 456777888877 443 346688899888775
Q ss_pred CCCcHHHHHHHHHHHHhhCCC--Cc---HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 189 DEPTAEDAIANCLKAEELAPA--PW---KENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~--~~---~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
|++++|+.++++++++.+. +. ..++..+|.++...|++++|++.+++++++...
T Consensus 121 --g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 121 --GDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp --TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 8899999999999986421 11 234689999999999999999999999987544
No 150
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.54 E-value=2.8e-14 Score=110.10 Aligned_cols=103 Identities=14% Similarity=0.033 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHcc------------------CCCChhHHHHHHHHHHHhhccc
Q psy9159 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQM------------------APKDFTLYSLKGRYQYEISKLS 174 (259)
Q Consensus 113 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l------------------~P~~~~~~~~lG~~~~~~~~~~ 174 (259)
+..+...|..+...|++. .|...|+++|++ +|.++.+|+.+|.++..+
T Consensus 11 a~~~~~~G~~~~~~~~~~----------~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~---- 76 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYK----------EAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI---- 76 (162)
T ss_dssp HHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 456778888888888887 567888999998 777889999999999886
Q ss_pred hHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 175 ~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
|++++|+.+++++++++| +++.+++.+|.+|..+|++++|+..|+++++++|.++
T Consensus 77 ----------------~~~~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 77 ----------------GDLHEAEETSSEVLKREE-TNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp ----------------TCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred ----------------CcHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 889999999999999999 7899999999999999999999999999999998877
No 151
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.53 E-value=4.6e-14 Score=123.59 Aligned_cols=178 Identities=16% Similarity=0.151 Sum_probs=135.7
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCC-------HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh-
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPND-------PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS- 113 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~-------~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~- 113 (259)
.. |++++|+..++++++..+.. +.++..+|.+|..+|++. +|+.++++++++.|...
T Consensus 155 ~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al~~~~~~~~ 219 (383)
T 3ulq_A 155 YM-KQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYE--------------DAISHFQKAYSMAEAEKQ 219 (383)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHTTC
T ss_pred Hc-CCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHH--------------HHHHHHHHHHHHHHHcCC
Confidence 45 99999999999999875443 458888999999988875 99999999998876554
Q ss_pred -----HHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHc-----cC-CCChhHHHHHHHHHHHhhccch----HHH
Q psy9159 114 -----NTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQ-----MA-PKDFTLYSLKGRYQYEISKLSF----FER 178 (259)
Q Consensus 114 -----~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~-----l~-P~~~~~~~~lG~~~~~~~~~~~----~~~ 178 (259)
.++..+|.++...|++. .|..++++|++ .+ |..+.++..+|.++...++.+. +.+
T Consensus 220 ~~~~~~~~~~lg~~y~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 289 (383)
T 3ulq_A 220 PQLMGRTLYNIGLCKNSQSQYE----------DAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSK 289 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCCHH----------HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 47888999999998887 56788899988 56 8889999999999998876542 222
Q ss_pred HHHHH-------------Hhc--CCCCCc---HHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 179 KIAVL-------------IVS--DLDEPT---AEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 179 ~~~~~-------------~~~--~~~~g~---~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
++... ..+ ....|+ +++|+..++++ ...| ....++..+|.+|..+|++++|.++++++++
T Consensus 290 al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~-~~~~-~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 367 (383)
T 3ulq_A 290 GMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK-MLYA-DLEDFAIDVAKYYHERKNFQKASAYFLKVEQ 367 (383)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT-TCHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC-cCHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 22110 000 012455 77777777776 3334 4456788999999999999999999999998
Q ss_pred CCCCCc
Q psy9159 241 IPVVSY 246 (259)
Q Consensus 241 l~p~~~ 246 (259)
+...-.
T Consensus 368 ~~~~i~ 373 (383)
T 3ulq_A 368 VRQLIQ 373 (383)
T ss_dssp HHTSCS
T ss_pred HHHHhh
Confidence 775543
No 152
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.53 E-value=2.2e-14 Score=121.04 Aligned_cols=155 Identities=15% Similarity=0.089 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHhhc------CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChH------
Q psy9159 47 KAKAYNLTMELNNK------QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN------ 114 (259)
Q Consensus 47 ~~~A~~~~~~~~~~------~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~------ 114 (259)
+++|+..+++++.. .|..+.++..+|.++...|++. +|+.++++++++.|....
T Consensus 159 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------------~A~~~~~~a~~~~~~~~~~~~~~~ 224 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFR--------------DAVIAHEQRLLIAKEFGDKAAERR 224 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH--------------HHHHHHHHHHHHHHhcCChHHHHH
Confidence 99999999998775 3445668888999999988875 899999999988766544
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC------hhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD------FTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 115 ~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~------~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
++..+|.++...|++. .+...+++++++.|.. ..++..+|.++...
T Consensus 225 ~~~~l~~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~------------------ 276 (338)
T 3ro2_A 225 AYSNLGNAYIFLGEFE----------TASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL------------------ 276 (338)
T ss_dssp HHHHHHHHHHHHTCHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHh------------------
Confidence 7888888888888876 5678888888887766 67788888888774
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCc------HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 189 DEPTAEDAIANCLKAEELAPAPW------KENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~~~------~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
|++++|+.++++++++.| .. ..++..+|.+|..+|++++|++++++++++.+...
T Consensus 277 --g~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 337 (338)
T 3ro2_A 277 --QDYEKAIDYHLKHLAIAQ-ELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVG 337 (338)
T ss_dssp --TCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC-----
T ss_pred --cCHHHHHHHHHHHHHHHH-hcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhc
Confidence 889999999999999865 22 34788999999999999999999999999987543
No 153
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.52 E-value=5.4e-15 Score=133.52 Aligned_cols=123 Identities=11% Similarity=0.037 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC---------------hhHH
Q psy9159 96 LQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD---------------FTLY 160 (259)
Q Consensus 96 ~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~---------------~~~~ 160 (259)
++|++.++++++.+|+++.++..+|.++...+++. .|...|++|++++|++ ..+|
T Consensus 251 ~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~----------~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~ 320 (457)
T 1kt0_A 251 EKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYM----------QAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAF 320 (457)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHH
T ss_pred ccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHH----------HHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHH
Confidence 47788888999999999999999999999999987 5778999999999999 6899
Q ss_pred HHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 161 SLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 161 ~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
+++|.++..+ |++++|+.+|++|++++| ++..+++++|.+|..+|++++|+..|+++++
T Consensus 321 ~nla~~~~~~--------------------g~~~~A~~~~~~al~~~p-~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~ 379 (457)
T 1kt0_A 321 LNLAMCYLKL--------------------REYTKAVECCDKALGLDS-ANEKGLYRRGEAQLLMNEFESAKGDFEKVLE 379 (457)
T ss_dssp HHHHHHHHHT--------------------TCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHh--------------------cCHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9999999885 889999999999999999 7899999999999999999999999999999
Q ss_pred CCCCCccch
Q psy9159 241 IPVVSYESH 249 (259)
Q Consensus 241 l~p~~~~~~ 249 (259)
++|.+.+-.
T Consensus 380 l~P~~~~a~ 388 (457)
T 1kt0_A 380 VNPQNKAAR 388 (457)
T ss_dssp TC----CHH
T ss_pred hCCCCHHHH
Confidence 999887543
No 154
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.52 E-value=1.1e-13 Score=101.93 Aligned_cols=109 Identities=14% Similarity=0.036 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh---hHHHHHHHHHHHhhccchHHHHHHHHHhcCCCC
Q psy9159 114 NTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF---TLYSLKGRYQYEISKLSFFERKIAVLIVSDLDE 190 (259)
Q Consensus 114 ~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~---~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (259)
.+++.+|.++...|++. .+...++++++.+|+++ .+++.+|.+++..
T Consensus 3 ~~~~~~a~~~~~~~~~~----------~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~-------------------- 52 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYD----------DASQLFLSFLELYPNGVYTPNALYWLGESYYAT-------------------- 52 (129)
T ss_dssp CCHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHT--------------------
T ss_pred HHHHHHHHHHHHhCCHH----------HHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHh--------------------
Confidence 45678888888888887 56789999999999999 7999999999875
Q ss_pred CcHHHHHHHHHHHHhhCCCCc---HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccchhhhh
Q psy9159 191 PTAEDAIANCLKAEELAPAPW---KENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLST 253 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~---~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~~ 253 (259)
|++++|+.+|+++++.+| ++ +.+++.+|.++..+|++++|++.|+++++..|+++.......
T Consensus 53 ~~~~~A~~~~~~~~~~~p-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~ 117 (129)
T 2xev_A 53 RNFQLAEAQFRDLVSRYP-THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQE 117 (129)
T ss_dssp TCHHHHHHHHHHHHHHCT-TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCC-CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHH
Confidence 889999999999999999 67 788999999999999999999999999999998876555443
No 155
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.52 E-value=2.1e-13 Score=98.68 Aligned_cols=110 Identities=22% Similarity=0.323 Sum_probs=96.6
Q ss_pred hCCCC-hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhc
Q psy9159 108 LAPNN-SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVS 186 (259)
Q Consensus 108 ~~P~~-~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~ 186 (259)
.+|.+ +.++..+|.++...+++. .+...++++++.+|+++.+++.+|.++...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~la~~~~~~---------------- 56 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQGDYD----------EAIEYYQKALELDPNNAEAWYNLGNAYYKQ---------------- 56 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----------------
T ss_pred CCccccHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHCcCcHHHHHHHHHHHHHh----------------
Confidence 46766 778889999999888887 567899999999999999999999998874
Q ss_pred CCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 187 DLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 187 ~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
|++++|+.+|+++++++| .....+..+|.++...|++++|+++++++++++|.+++.
T Consensus 57 ----~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 113 (125)
T 1na0_A 57 ----GDYDEAIEYYQKALELDP-NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 113 (125)
T ss_dssp ----TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred ----CCHHHHHHHHHHHHHhCC-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHH
Confidence 889999999999999999 778999999999999999999999999999999877643
No 156
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.52 E-value=2.8e-13 Score=98.87 Aligned_cols=116 Identities=13% Similarity=0.105 Sum_probs=104.4
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA 109 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~ 109 (259)
.....+..++ .. |++++|+..+++++..+|+++.+++.+|.++...|++. +|+..++++++++
T Consensus 14 ~~~~~~~~~~--~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--------------~A~~~~~~~~~~~ 76 (131)
T 2vyi_A 14 RLKTEGNEQM--KV-ENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYA--------------GAVQDCERAICID 76 (131)
T ss_dssp HHHHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHH--Hc-cCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchH--------------HHHHHHHHHHhcC
Confidence 3455566666 56 99999999999999999999999999999999999875 9999999999999
Q ss_pred CCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhc
Q psy9159 110 PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISK 172 (259)
Q Consensus 110 P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~ 172 (259)
|+++.++..+|.++...|++. .+...++++++++|+++.++..+|.++...++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~----------~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 77 PAYSKAYGRMGLALSSLNKHV----------EAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp TTCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHhCCHH----------HHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 999999999999999999887 56789999999999999999999999887644
No 157
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.51 E-value=4.1e-13 Score=98.74 Aligned_cols=116 Identities=16% Similarity=0.094 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHhhchhhHHHHHhcHHHH
Q psy9159 66 DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS---NTQKWYGICVGANGQFQSLKEKIKCGVVF 142 (259)
Q Consensus 66 ~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~---~~~~~la~~~~~~~~~~~~~~~~~~~~~a 142 (259)
++++.+|.++...|++. +|+..++++++.+|+++ .+++++|.++...|++. .+
T Consensus 3 ~~~~~~a~~~~~~~~~~--------------~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~----------~A 58 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYD--------------DASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQ----------LA 58 (129)
T ss_dssp CCHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHH----------HH
T ss_pred HHHHHHHHHHHHhCCHH--------------HHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHH----------HH
Confidence 45788999999999875 99999999999999999 79999999999999987 56
Q ss_pred HHHHHHHHccCCCC---hhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHH
Q psy9159 143 RDQMNKAIQMAPKD---FTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIA 219 (259)
Q Consensus 143 ~~~~~kAl~l~P~~---~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la 219 (259)
...++++++++|++ +.+++.+|.++... |++++|+.+|+++++..| +...+...+.
T Consensus 59 ~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~--------------------g~~~~A~~~~~~~~~~~p-~~~~~~~a~~ 117 (129)
T 2xev_A 59 EAQFRDLVSRYPTHDKAAGGLLKLGLSQYGE--------------------GKNTEAQQTLQQVATQYP-GSDAARVAQE 117 (129)
T ss_dssp HHHHHHHHHHCTTSTTHHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHST-TSHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcccHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHHCC-CChHHHHHHH
Confidence 78999999999999 88899999999875 889999999999999999 6666655555
Q ss_pred HHHHHhC
Q psy9159 220 KCYIEAG 226 (259)
Q Consensus 220 ~~~~~~g 226 (259)
.+-...+
T Consensus 118 ~l~~l~~ 124 (129)
T 2xev_A 118 RLQSIRL 124 (129)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 4444333
No 158
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.51 E-value=1.4e-13 Score=100.64 Aligned_cols=120 Identities=17% Similarity=0.084 Sum_probs=105.5
Q ss_pred CCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHH
Q psy9159 62 PNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVV 141 (259)
Q Consensus 62 p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~ 141 (259)
|+.+++++.+|.++...|++. +|+..++++++.+|+++.++..+|.++...|++. .
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~--------------~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~----------~ 56 (131)
T 1elr_A 1 GKQALKEKELGNDAYKKKDFD--------------TALKHYDKAKELDPTNMTYITNQAAVYFEKGDYN----------K 56 (131)
T ss_dssp CHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH----------H
T ss_pred ChHHHHHHHHHHHHHHhcCHH--------------HHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHH----------H
Confidence 345788999999999999875 9999999999999999999999999999999887 5
Q ss_pred HHHHHHHHHccCCCC-------hhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHh
Q psy9159 142 FRDQMNKAIQMAPKD-------FTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKEN 214 (259)
Q Consensus 142 a~~~~~kAl~l~P~~-------~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~ 214 (259)
+...++++++++|++ +.+++.+|.++... |++++|+.+|+++++++| + ...
T Consensus 57 A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--------------------~~~~~A~~~~~~~~~~~~-~-~~~ 114 (131)
T 1elr_A 57 CRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKE--------------------EKYKDAIHFYNKSLAEHR-T-PDV 114 (131)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCC-C-HHH
T ss_pred HHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHh--------------------ccHHHHHHHHHHHHHhCC-C-HHH
Confidence 678999999999988 88899999988774 889999999999999999 5 777
Q ss_pred HHHHHHHHHHhCC
Q psy9159 215 QLLIAKCYIEAGE 227 (259)
Q Consensus 215 ~~~la~~~~~~g~ 227 (259)
+..++.+...+++
T Consensus 115 ~~~l~~~~~~~~~ 127 (131)
T 1elr_A 115 LKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888776543
No 159
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.50 E-value=2.9e-14 Score=129.53 Aligned_cols=130 Identities=13% Similarity=0.033 Sum_probs=112.0
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
...+..++ .. |++++|++.|+++++.+|+++.++..+|.+|..+|++. +|++.++++++++|+
T Consensus 10 ~~lg~~~~--~~-g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al~l~p~ 72 (477)
T 1wao_1 10 KTQANDYF--KA-KDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYG--------------YALGDATRAIELDKK 72 (477)
T ss_dssp SSSSSSTT--TT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHSCTT
T ss_pred HHHHHHHH--Hh-CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHH--------------HHHHHHHHHHHhCCC
Confidence 34444555 56 99999999999999999999999999999999999875 999999999999999
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHH--HHHhhccchHHHHHHHHHhcCCC
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRY--QYEISKLSFFERKIAVLIVSDLD 189 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~--~~~~~~~~~~~~~~~~~~~~~~~ 189 (259)
++.++..+|.++...|++. +|.+.++++++++|+++.++..+|.+ +...
T Consensus 73 ~~~~~~~lg~~~~~~g~~~----------eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~------------------- 123 (477)
T 1wao_1 73 YIKGYYRRAASNMALGKFR----------AALRDYETVVKVKPHDKDAKMKYQECNKIVKQ------------------- 123 (477)
T ss_dssp CHHHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHH-------------------
T ss_pred CHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-------------------
Confidence 9999999999999999887 57789999999999999999999987 4443
Q ss_pred CCcHHHHHHHHH-----------HHHhhCC
Q psy9159 190 EPTAEDAIANCL-----------KAEELAP 208 (259)
Q Consensus 190 ~g~~~eAi~~~~-----------kAi~l~P 208 (259)
|++++|++.++ ++++++|
T Consensus 124 -g~~~~A~~~~~~~~~~~~~~~~~al~~~~ 152 (477)
T 1wao_1 124 -KAFERAIAGDEHKRSVVDSLDIESMTIED 152 (477)
T ss_dssp -HHHCCC------CCSTTTCCTTSSCCCCT
T ss_pred -HHHHHHhccccccchhHhhhhhhhccccc
Confidence 77999999999 8999888
No 160
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.50 E-value=8.1e-13 Score=119.68 Aligned_cols=172 Identities=15% Similarity=0.102 Sum_probs=105.2
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH----hhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHC----LYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYG 120 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~----~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la 120 (259)
+++++|+..++++++. .++++++.+|.+|.. .++.. +|+.+++++++. +++.+++.+|
T Consensus 237 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~~~~~d~~--------------~A~~~~~~a~~~--~~~~a~~~Lg 298 (490)
T 2xm6_A 237 QDYTQSRVLFSQSAEQ--GNSIAQFRLGYILEQGLAGAKEPL--------------KALEWYRKSAEQ--GNSDGQYYLA 298 (490)
T ss_dssp CCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHTTTSSCCHH--------------HHHHHHHHHHTT--TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCHH--------------HHHHHHHHHHHc--CCHHHHHHHH
Confidence 6677777777776654 456666677776665 45443 555555555433 3445555555
Q ss_pred HHHHHh-----hchhhHHHH-------------------------HhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHh
Q psy9159 121 ICVGAN-----GQFQSLKEK-------------------------IKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEI 170 (259)
Q Consensus 121 ~~~~~~-----~~~~~~~~~-------------------------~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~ 170 (259)
.++... +++..+... ..+..++...++++++. .++.+++.+|.+|..
T Consensus 299 ~~y~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~- 375 (490)
T 2xm6_A 299 HLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQ- 375 (490)
T ss_dssp HHHHHCBTTBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH-
T ss_pred HHHHcCCCCCcCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc-
Confidence 555443 233210000 00111334445555444 344555555554433
Q ss_pred hccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHH----hCCHHHHHHHHHHHhcCCCCCc
Q psy9159 171 SKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIE----AGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~----~g~~~eA~~~~~kal~l~p~~~ 246 (259)
|....+++++|+.+|++|++.. ++.++.+||.+|.. .+++++|+++|++|++.+|..|
T Consensus 376 ---------------g~g~~~~~~~A~~~~~~A~~~~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~ 437 (490)
T 2xm6_A 376 ---------------GKGVKKDEQQAAIWMRKAAEQG---LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLF 437 (490)
T ss_dssp ---------------TSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHH
T ss_pred ---------------CCCCCCCHHHHHHHHHHHHhCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCc
Confidence 1122488999999999999964 37899999999999 8999999999999999997645
Q ss_pred cchhhhhhh
Q psy9159 247 ESHDLSTTY 255 (259)
Q Consensus 247 ~~~~~~~~~ 255 (259)
++.....+.
T Consensus 438 ~~~~a~~~l 446 (490)
T 2xm6_A 438 GTENRNITE 446 (490)
T ss_dssp HHHHHHHHH
T ss_pred CCHHHHHHH
Confidence 455554443
No 161
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.49 E-value=2.6e-13 Score=119.31 Aligned_cols=125 Identities=17% Similarity=0.126 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH----------------hCCCChHHHHHHHHHHHHhhc
Q psy9159 65 PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME----------------LAPNNSNTQKWYGICVGANGQ 128 (259)
Q Consensus 65 ~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~----------------~~P~~~~~~~~la~~~~~~~~ 128 (259)
+..+..+|.++...|++. +|+..|+++++ ++|.++.++.++|.++...++
T Consensus 223 a~~~~~~g~~~~~~g~~~--------------~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~ 288 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWE--------------MAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSD 288 (370)
T ss_dssp HHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCHH--------------HHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 455777888888888765 89999999998 888889999999999999988
Q ss_pred hhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCC
Q psy9159 129 FQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAP 208 (259)
Q Consensus 129 ~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P 208 (259)
+. .|+.++++||+++|+++.+|+.+|.++..+ |++++|+.+|++|++++|
T Consensus 289 ~~----------~A~~~~~~al~~~p~~~~a~~~lg~~~~~~--------------------g~~~eA~~~l~~Al~l~P 338 (370)
T 1ihg_A 289 WQ----------GAVDSCLEALEIDPSNTKALYRRAQGWQGL--------------------KEYDQALADLKKAQEIAP 338 (370)
T ss_dssp HH----------HHHHHHHHHHTTCTTCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCT
T ss_pred HH----------HHHHHHHHHHHhCchhHHHHHHHHHHHHHc--------------------cCHHHHHHHHHHHHHhCC
Confidence 87 567899999999999999999999998875 789999999999999999
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHH
Q psy9159 209 APWKENQLLIAKCYIEAGEYAKAVQW 234 (259)
Q Consensus 209 ~~~~~~~~~la~~~~~~g~~~eA~~~ 234 (259)
++..++..++.++..+++.+++.+.
T Consensus 339 -~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 339 -EDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999999999988887643
No 162
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.49 E-value=2.8e-14 Score=104.28 Aligned_cols=88 Identities=17% Similarity=0.038 Sum_probs=81.5
Q ss_pred HHHHHHHHHHcc---CCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHH
Q psy9159 141 VFRDQMNKAIQM---APKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLL 217 (259)
Q Consensus 141 ~a~~~~~kAl~l---~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~ 217 (259)
+|+..+++++++ +|+++.+++.+|.++... |++++|+.+|+++++++| +++.+++.
T Consensus 8 ~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~--------------------~~~~~A~~~~~~al~~~p-~~~~~~~~ 66 (117)
T 3k9i_A 8 QAVPYYEKAIASGLQGKDLAECYLGLGSTFRTL--------------------GEYRKAEAVLANGVKQFP-NHQALRVF 66 (117)
T ss_dssp CCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCT-TCHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCC-CchHHHHH
Confidence 467899999999 699999999999999885 889999999999999999 77999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHhcCCCCCccch
Q psy9159 218 IAKCYIEAGEYAKAVQWLDKAKAIPVVSYESH 249 (259)
Q Consensus 218 la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~ 249 (259)
+|.++..+|++++|++.+++++++.|.+++-.
T Consensus 67 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 67 YAMVLYNLGRYEQGVELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 99999999999999999999999999887643
No 163
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.49 E-value=1.3e-13 Score=98.20 Aligned_cols=105 Identities=14% Similarity=0.067 Sum_probs=97.0
Q ss_pred cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcH
Q psy9159 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCG 139 (259)
Q Consensus 60 ~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~ 139 (259)
.+|+++.+++.+|.++...|++. +|+..++++++++|+++.++..+|.++...|++.
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~~~--------------~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~--------- 57 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGNYT--------------ESIDLFEKAIQLDPEESKYWLMKGKALYNLERYE--------- 57 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCCHH--------------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH---------
T ss_pred CCCCcHHHHHHHHHHHHHhhhHH--------------HHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHH---------
Confidence 36899999999999999999875 9999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHccCCC--ChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCC-CcHHHHHHHHHHHHhhCC
Q psy9159 140 VVFRDQMNKAIQMAPK--DFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDE-PTAEDAIANCLKAEELAP 208 (259)
Q Consensus 140 ~~a~~~~~kAl~l~P~--~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~eAi~~~~kAi~l~P 208 (259)
.+...++++++++|+ ++.++..+|.++.. . |++++|+++++++++..|
T Consensus 58 -~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~--------------------~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 58 -EAVDCYNYVINVIEDEYNKDVWAAKADALRY--------------------IEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp -HHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT--------------------CSSCSHHHHHHHHHHGGGCC
T ss_pred -HHHHHHHHHHHhCcccchHHHHHHHHHHHHH--------------------HhCCHHHHHHHHHHHhhccc
Confidence 567899999999999 99999999998865 5 678999999999999999
No 164
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.47 E-value=2.4e-13 Score=99.37 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=93.2
Q ss_pred CCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCC
Q psy9159 110 PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLD 189 (259)
Q Consensus 110 P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (259)
|+.+.++..+|.++...|++. .+...++++++++|+++.+++.+|.++...
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~la~~~~~~------------------- 51 (131)
T 1elr_A 1 GKQALKEKELGNDAYKKKDFD----------TALKHYDKAKELDPTNMTYITNQAAVYFEK------------------- 51 (131)
T ss_dssp CHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-------------------
T ss_pred ChHHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHhcCCccHHHHHHHHHHHHHh-------------------
Confidence 345677888999998888887 567899999999999999999999999875
Q ss_pred CCcHHHHHHHHHHHHhhCCCCc-------HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCC
Q psy9159 190 EPTAEDAIANCLKAEELAPAPW-------KENQLLIAKCYIEAGEYAKAVQWLDKAKAIPV 243 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~~~-------~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p 243 (259)
|++++|+.+|++++++.| .. ..++..+|.++..+|++++|+++|+++++++|
T Consensus 52 -~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 52 -GDYNKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp -TCHHHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred -ccHHHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 889999999999999988 55 78899999999999999999999999999988
No 165
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.46 E-value=9.9e-14 Score=120.41 Aligned_cols=132 Identities=13% Similarity=0.012 Sum_probs=84.1
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCH-----------------HHHHHHHHHHHHhhchhcccCcHHHHHHH
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDP-----------------DVLYRLAKACHCLYDIKRRENDKEASEKY 94 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~-----------------~~~~~la~~~~~~g~~~~~~~~~~~~~~~ 94 (259)
...+..++ .. |++++|+..|++++...|+++ .+++++|.+|..+|++.
T Consensus 183 ~~~g~~~~--~~-g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~------------ 247 (338)
T 2if4_A 183 KMDGNSLF--KE-EKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYD------------ 247 (338)
T ss_dssp HHHHHHTC--SS-SCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCH------------
T ss_pred HHHHHHHH--hc-CCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHH------------
Confidence 45555666 56 999999999999999999987 48999999999999886
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccc
Q psy9159 95 ILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174 (259)
Q Consensus 95 ~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~ 174 (259)
+|+..++++++++|+++.+++++|.++..+|++. .|...|+++++++|+++.++..++.+....
T Consensus 248 --~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~----------~A~~~l~~al~l~p~~~~a~~~L~~l~~~~---- 311 (338)
T 2if4_A 248 --EAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMD----------SARDDFRKAQKYAPDDKAIRRELRALAEQE---- 311 (338)
T ss_dssp --HHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHH----------HHHHHHHHTTC-----------------------
T ss_pred --HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----
Confidence 9999999999999999999999999999999987 567899999999999999999999875432
Q ss_pred hHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCC
Q psy9159 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPA 209 (259)
Q Consensus 175 ~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~ 209 (259)
.+..+++...|.++++.+|+
T Consensus 312 ---------------~~~~~~a~~~~~~~l~~~p~ 331 (338)
T 2if4_A 312 ---------------KALYQKQKEMYKGIFKGKDE 331 (338)
T ss_dssp -----------------------------------
T ss_pred ---------------HHHHHHHHHHHHHhhCCCCC
Confidence 25678999999999999993
No 166
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.45 E-value=2.2e-13 Score=116.29 Aligned_cols=132 Identities=14% Similarity=0.042 Sum_probs=103.6
Q ss_pred HHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHH
Q psy9159 71 LAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN------SNTQKWYGICVGANGQFQSLKEKIKCGVVFRD 144 (259)
Q Consensus 71 la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~------~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~ 144 (259)
.|.+|...|++. +|+..+++++++.+.. ..++..+|.++...|++. .|..
T Consensus 42 a~~~~~~~g~~~--------------~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~----------~A~~ 97 (307)
T 2ifu_A 42 AAVAFKNAKQLE--------------QAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMP----------EAVQ 97 (307)
T ss_dssp HHHHHHHTTCHH--------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG----------GGHH
T ss_pred HHHHHHHcCCHH--------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHH----------HHHH
Confidence 356777777764 9999999999887644 456778888888888887 4567
Q ss_pred HHHHHHccCCCC------hhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCc-----HH
Q psy9159 145 QMNKAIQMAPKD------FTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPW-----KE 213 (259)
Q Consensus 145 ~~~kAl~l~P~~------~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~-----~~ 213 (259)
++++|+++.+.. ..++..+|.+|.. |++++|+.+|++|+++.|... ..
T Consensus 98 ~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~---------------------g~~~~A~~~~~~Al~~~~~~~~~~~~~~ 156 (307)
T 2ifu_A 98 YIEKASVMYVENGTPDTAAMALDRAGKLMEP---------------------LDLSKAVHLYQQAAAVFENEERLRQAAE 156 (307)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT---------------------TCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc---------------------CCHHHHHHHHHHHHHHHHhCCChhHHHH
Confidence 888888875432 3566777776632 779999999999999976221 46
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 214 NQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 214 ~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
++.++|.+|..+|++++|++.|++++++.|.+..
T Consensus 157 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 190 (307)
T 2ifu_A 157 LIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN 190 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Confidence 7899999999999999999999999998876554
No 167
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.45 E-value=7.1e-12 Score=113.48 Aligned_cols=165 Identities=13% Similarity=0.033 Sum_probs=121.9
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH----hhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHC----LYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYG 120 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~----~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la 120 (259)
+++++|+..|+++.+. .++++++.||.+|.. .++. ++|+.+++++++. +++.+++.+|
T Consensus 57 ~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~--------------~~A~~~~~~a~~~--~~~~a~~~Lg 118 (490)
T 2xm6_A 57 KDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDY--------------AQAVIWYKKAALK--GLPQAQQNLG 118 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH--------------HHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH--------------HHHHHHHHHHHHC--CCHHHHHHHH
Confidence 8999999999999886 789999999999998 4444 4889999998765 5888888899
Q ss_pred HHHHH----hhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH----hhcc----chHHHHHH-------
Q psy9159 121 ICVGA----NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE----ISKL----SFFERKIA------- 181 (259)
Q Consensus 121 ~~~~~----~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~----~~~~----~~~~~~~~------- 181 (259)
.++.. .+++. ++...++++++. +++.+++.||.+|.. .++. .|+.+++.
T Consensus 119 ~~y~~g~g~~~~~~----------~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~~~a~ 186 (490)
T 2xm6_A 119 VMYHEGNGVKVDKA----------ESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSC 186 (490)
T ss_dssp HHHHHTSSSCCCHH----------HHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCCCCCCHH----------HHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHH
Confidence 88775 33443 566777887654 578888888887765 2222 23333322
Q ss_pred ----HHHh-cCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHH----hCCHHHHHHHHHHHhcCC
Q psy9159 182 ----VLIV-SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIE----AGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 182 ----~~~~-~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~----~g~~~eA~~~~~kal~l~ 242 (259)
..+. +....+++++|+.+|+++++.. ++.+++.||.+|.. .+++++|+++|+++++..
T Consensus 187 ~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~ 253 (490)
T 2xm6_A 187 NQLGYMYSRGLGVERNDAISAQWYRKSATSG---DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQG 253 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhcCCCCCcCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 1111 1122588899999999988764 36788889999887 788999999999988764
No 168
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.45 E-value=9.4e-13 Score=115.19 Aligned_cols=174 Identities=10% Similarity=-0.007 Sum_probs=127.1
Q ss_pred CCcCCHHHHHHHHHHHhhcCCC-------CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC---
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPN-------DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN--- 111 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~-------~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~--- 111 (259)
.. |++++|+..++++++..+. .+.++..+|.+|..+|++. +|++++++++++.+.
T Consensus 153 ~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~--------------~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 153 HM-KQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYD--------------KALPHLEAALELAMDIQN 217 (378)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHTTC
T ss_pred Hc-CCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHH--------------HHHHHHHHHHHHHHHcCC
Confidence 45 9999999999999986543 2557788899998888875 899999999987442
Q ss_pred ---ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHc-----cCCCChhHHHHHHHHHHHhhccchHHHHHHHH
Q psy9159 112 ---NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQ-----MAPKDFTLYSLKGRYQYEISKLSFFERKIAVL 183 (259)
Q Consensus 112 ---~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~-----l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~ 183 (259)
.+.++.++|.++...|++. .|..+++++++ .+|..+.+++.+|.++...++.+.....+..+
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 287 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQ----------MAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEG 287 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHH----------HHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 2356778899998888887 56788899988 88989999999999999886643222222111
Q ss_pred Hhc-------------------CCCCCc---HHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 184 IVS-------------------DLDEPT---AEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 184 ~~~-------------------~~~~g~---~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
+-. ....++ +.+|+.++++. ...| .....+..+|.+|...|++++|+++|++++++
T Consensus 288 l~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~~-~~~~-~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~ 365 (378)
T 3q15_A 288 LDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKK-NLHA-YIEACARSAAAVFESSCHFEQAAAFYRKVLKA 365 (378)
T ss_dssp HHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHT-TCHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhC-CChh-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 100 011244 66666666652 2223 33456788999999999999999999999876
Q ss_pred C
Q psy9159 242 P 242 (259)
Q Consensus 242 ~ 242 (259)
.
T Consensus 366 ~ 366 (378)
T 3q15_A 366 Q 366 (378)
T ss_dssp H
T ss_pred H
Confidence 4
No 169
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.44 E-value=9.8e-14 Score=101.37 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH
Q psy9159 93 KYILQGIEYAKKAMEL---APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE 169 (259)
Q Consensus 93 ~~~~~A~~~~~kal~~---~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~ 169 (259)
+.+++|+..+++++++ +|+++.++..+|.++...|++. +|...++++++++|+++.+++.+|.++..
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 73 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYR----------KAEAVLANGVKQFPNHQALRVFYAMVLYN 73 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 3456999999999999 6999999999999999999987 57799999999999999999999999988
Q ss_pred hhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHH
Q psy9159 170 ISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQL 216 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~ 216 (259)
. |++++|+.+|+++++.+| +++....
T Consensus 74 ~--------------------g~~~~A~~~~~~al~~~p-~~~~~~~ 99 (117)
T 3k9i_A 74 L--------------------GRYEQGVELLLKIIAETS-DDETIQS 99 (117)
T ss_dssp H--------------------TCHHHHHHHHHHHHHHHC-CCHHHHH
T ss_pred c--------------------CCHHHHHHHHHHHHHhCC-CcHHHHH
Confidence 6 889999999999999999 6665543
No 170
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.43 E-value=5.4e-13 Score=100.70 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHhhchhhHHHHHhc
Q psy9159 65 PDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS------NTQKWYGICVGANGQFQSLKEKIKC 138 (259)
Q Consensus 65 ~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~------~~~~~la~~~~~~~~~~~~~~~~~~ 138 (259)
..++..+|.++...|++. +|+.++++++++.|+.. .++..+|.++...|++.
T Consensus 9 ~~~~~~l~~~~~~~~~~~--------------~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~-------- 66 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFR--------------DAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFE-------- 66 (164)
T ss_dssp HHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH--------
T ss_pred HHHHHHHHHHHHHhcCHH--------------HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHH--------
Confidence 467788899998888865 99999999998876543 37788888888888887
Q ss_pred HHHHHHHHHHHHccCCCC------hhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCC---
Q psy9159 139 GVVFRDQMNKAIQMAPKD------FTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPA--- 209 (259)
Q Consensus 139 ~~~a~~~~~kAl~l~P~~------~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~--- 209 (259)
.+...+++++++.|.. ..++..+|.++... |++++|+.++++++++.+.
T Consensus 67 --~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~--------------------~~~~~A~~~~~~a~~~~~~~~~ 124 (164)
T 3ro3_A 67 --TASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL--------------------QDYEKAIDYHLKHLAIAQELKD 124 (164)
T ss_dssp --HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH--------------------hhHHHHHHHHHHHHHHHHHccc
Confidence 4567788888776553 56788888888764 8899999999999987421
Q ss_pred --CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 210 --PWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 210 --~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
....++..+|.++...|++++|++.+++++++...
T Consensus 125 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 125 RIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred hHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 12456889999999999999999999999987543
No 171
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.42 E-value=4.1e-12 Score=110.40 Aligned_cols=165 Identities=13% Similarity=0.135 Sum_probs=129.5
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHH-----HHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPD-----VLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~-----~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
..+..++ .. |++++|+..+++++...|.+.. ++..+|.++...|++. +|+..++++++
T Consensus 19 ~~a~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al~ 81 (373)
T 1hz4_A 19 LRAQVAI--ND-GNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELT--------------RSLALMQQTEQ 81 (373)
T ss_dssp HHHHHHH--HT-TCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHH
T ss_pred HHHHHHH--HC-CCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHH--------------HHHHHHHHHHH
Confidence 3344444 46 9999999999999998876533 5777888888888765 89999999998
Q ss_pred hCCCChHH------HHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccC--------CCChhHHHHHHHHHHHhhcc
Q psy9159 108 LAPNNSNT------QKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMA--------PKDFTLYSLKGRYQYEISKL 173 (259)
Q Consensus 108 ~~P~~~~~------~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~--------P~~~~~~~~lG~~~~~~~~~ 173 (259)
+.|..... +..+|.++...|++. .+...+++++++. |....++..+|.++...
T Consensus 82 ~~~~~~~~~~~~~~~~~la~~~~~~G~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~--- 148 (373)
T 1hz4_A 82 MARQHDVWHYALWSLIQQSEILFAQGFLQ----------TAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAW--- 148 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHT---
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHCCCHH----------HHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHh---
Confidence 87765433 567788888888877 4567777777764 34456778899888774
Q ss_pred chHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCC----cHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 174 SFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAP----WKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 174 ~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~----~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
|++++|+.++++++++.|.. ...++..+|.++...|++++|...+++++++.+.
T Consensus 149 -----------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 149 -----------------ARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp -----------------TCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred -----------------cCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 88999999999999998732 2356889999999999999999999999987443
No 172
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.41 E-value=6.2e-13 Score=96.49 Aligned_cols=85 Identities=14% Similarity=0.135 Sum_probs=78.9
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHH
Q psy9159 142 FRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKC 221 (259)
Q Consensus 142 a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~ 221 (259)
+...++++++++|+++.+++.+|.++... |++++|+.+|+++++++| ++..++..+|.+
T Consensus 4 a~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------------g~~~~A~~~~~~al~~~p-~~~~~~~~la~~ 62 (115)
T 2kat_A 4 ITERLEAMLAQGTDNMLLRFTLGKTYAEH--------------------EQFDAALPHLRAALDFDP-TYSVAWKWLGKT 62 (115)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHc--------------------cCHHHHHHHHHHHHHHCC-CcHHHHHHHHHH
Confidence 46789999999999999999999999875 889999999999999999 789999999999
Q ss_pred HHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 222 YIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 222 ~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
|..+|++++|+..|++++++.|.+.+
T Consensus 63 ~~~~g~~~~A~~~~~~al~~~~~~~~ 88 (115)
T 2kat_A 63 LQGQGDRAGARQAWESGLAAAQSRGD 88 (115)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999876543
No 173
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.41 E-value=5.6e-12 Score=113.51 Aligned_cols=98 Identities=8% Similarity=-0.047 Sum_probs=70.9
Q ss_pred CHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-
Q psy9159 46 DKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG- 124 (259)
Q Consensus 46 ~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~- 124 (259)
++++|+..|+++.+.+|.++..++.+|.+|....... +++++|+.+|+++. |+++.+++.+|.++.
T Consensus 194 ~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~----------~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~ 260 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGT----------PDEKTAQALLEKIA---PGYPASWVSLAQLLYD 260 (452)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSS----------CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCC----------CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHh
Confidence 8889999999999988888888888888886542111 12358888888887 888888888888732
Q ss_pred --HhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHH
Q psy9159 125 --ANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQY 168 (259)
Q Consensus 125 --~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~ 168 (259)
..+++. ++...|++|++. .++.+++.||.+|.
T Consensus 261 ~~~~~d~~----------~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 261 FPELGDVE----------QMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp SGGGCCHH----------HHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred CCCCCCHH----------HHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 233332 566777777644 47788888887776
No 174
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.41 E-value=7.1e-12 Score=108.78 Aligned_cols=154 Identities=11% Similarity=0.024 Sum_probs=127.1
Q ss_pred C-CHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHh-h-chhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Q psy9159 45 D-DKAKAYNLTMELNNKQPNDPDVLYRLAKACHCL-Y-DIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGI 121 (259)
Q Consensus 45 ~-~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~-g-~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~ 121 (259)
| .+++++..+.+++..+|++..+|...+.++..+ + +. +++++.+.++++++|.|..+|...+.
T Consensus 102 ~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~--------------~~EL~~~~k~L~~dpkNy~AW~~R~w 167 (349)
T 3q7a_A 102 NKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDP--------------VSEIEYIHGSLLPDPKNYHTWAYLHW 167 (349)
T ss_dssp TCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCC--------------HHHHHHHHHHTSSCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCCh--------------HHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 5 699999999999999999999999999999988 6 44 39999999999999999999999999
Q ss_pred HHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHH
Q psy9159 122 CVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCL 201 (259)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~ 201 (259)
++..++.+.... ........+.++++|+++|.|..+|+.+|.+....+... .....+++++++++
T Consensus 168 vl~~l~~~~~~~--~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~-------------~~~~~~~eELe~~~ 232 (349)
T 3q7a_A 168 LYSHFSTLGRIS--EAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAE-------------TSSRSLQDELIYIL 232 (349)
T ss_dssp HHHHHHHTTCCC--HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCC-------------CCHHHHHHHHHHHH
T ss_pred HHHHhccccccc--hhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccc-------------cchHHHHHHHHHHH
Confidence 999888765210 011124578889999999999999999998876542210 00013799999999
Q ss_pred HHHhhCCCCcHHhHHHHHHHHHHhCCH
Q psy9159 202 KAEELAPAPWKENQLLIAKCYIEAGEY 228 (259)
Q Consensus 202 kAi~l~P~~~~~~~~~la~~~~~~g~~ 228 (259)
+++.++| ++..+|.++..++...|+-
T Consensus 233 ~aI~~~P-~n~SaW~Ylr~Ll~~~~~~ 258 (349)
T 3q7a_A 233 KSIHLIP-HNVSAWNYLRGFLKHFSLP 258 (349)
T ss_dssp HHHHHCT-TCHHHHHHHHHHHHHTTCC
T ss_pred HHHHhCC-CCHHHHHHHHHHHHhcCCC
Confidence 9999999 7889999999999888864
No 175
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.38 E-value=2.5e-11 Score=105.51 Aligned_cols=156 Identities=12% Similarity=0.016 Sum_probs=113.9
Q ss_pred HhhcCCCCHHHHHH--HHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhh-HH
Q psy9159 57 LNNKQPNDPDVLYR--LAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQS-LK 133 (259)
Q Consensus 57 ~~~~~p~~~~~~~~--la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~-~~ 133 (259)
+...-|.++++|-. .|..+...++. +.+.+|+..+++|++++|+++.+|..+++++........ ..
T Consensus 186 ~~~~~p~~~~Aydl~Lra~~~l~~~~~-----------~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~ 254 (372)
T 3ly7_A 186 LQKILPHRGALLTNFYQAHDYLLHGDD-----------KSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDE 254 (372)
T ss_dssp HHHHSCSSGGGHHHHHHHHHHHHHCSH-----------HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HhccCCCCHHHHHHHHHHHHHHHcCCH-----------HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCch
Confidence 33445677666533 34444443322 346799999999999999999999998888763322210 01
Q ss_pred HHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHH
Q psy9159 134 EKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKE 213 (259)
Q Consensus 134 ~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~ 213 (259)
........+... ..++.++|.++.++..+|..+... |++++|+.++++|++++| + ..
T Consensus 255 ~~~~~l~~a~~a-~~a~~~~~~~a~~~~alal~~l~~--------------------gd~d~A~~~l~rAl~Ln~-s-~~ 311 (372)
T 3ly7_A 255 KQLAALNTEIDN-IVTLPELNNLSIIYQIKAVSALVK--------------------GKTDESYQAINTGIDLEM-S-WL 311 (372)
T ss_dssp HHHHHHHHHHHH-HHTCGGGTTCHHHHHHHHHHHHHH--------------------TCHHHHHHHHHHHHHHCC-C-HH
T ss_pred hhHHHHHHHHHH-HHhcccCCcCHHHHHHHHHHHHhC--------------------CCHHHHHHHHHHHHhcCC-C-HH
Confidence 111111122221 245688999999999999876543 889999999999999999 5 56
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 214 NQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 214 ~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
+|..+|.++...|++++|++.|++|+.++|..+
T Consensus 312 a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 312 NYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 788999999999999999999999999999764
No 176
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.35 E-value=3.9e-11 Score=108.02 Aligned_cols=170 Identities=11% Similarity=0.004 Sum_probs=118.3
Q ss_pred CHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q psy9159 46 DKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGA 125 (259)
Q Consensus 46 ~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~ 125 (259)
..+++..+++.+...+|. +++.||.+|...|.. ...++|+.+++++++.+|.++..++.+|.++..
T Consensus 160 ~~~~a~~~~~~a~~~~~~---a~~~Lg~~~~~~g~~-----------~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~ 225 (452)
T 3e4b_A 160 HLDDVERICKAALNTTDI---CYVELATVYQKKQQP-----------EQQAELLKQMEAGVSRGTVTAQRVDSVARVLGD 225 (452)
T ss_dssp GHHHHHHHHHHHTTTCTT---HHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHcCCHH---HHHHHHHHHHHcCCc-----------ccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 455555566666555554 788888888886632 145699999999999999999998999999854
Q ss_pred hhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH---hhcc----chHHHHHH-----------HHHh-c
Q psy9159 126 NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE---ISKL----SFFERKIA-----------VLIV-S 186 (259)
Q Consensus 126 ~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~---~~~~----~~~~~~~~-----------~~~~-~ 186 (259)
..... .+..++...|+++. |.++.+++.||.+|+. .++. .|+.++.. ..+. |
T Consensus 226 g~~~~------~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G 296 (452)
T 3e4b_A 226 ATLGT------PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEG 296 (452)
T ss_dssp GGGSS------CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHC
T ss_pred CCCCC------CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcC
Confidence 31111 12236789999997 9999999999998552 2221 24444332 1111 1
Q ss_pred CCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHH----hCCHHHHHHHHHHHhcCC
Q psy9159 187 DLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIE----AGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 187 ~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~----~g~~~eA~~~~~kal~l~ 242 (259)
.....++++|+.+|++|. | .++.++++||.+|.. .+++++|+++|+++.+..
T Consensus 297 ~g~~~d~~~A~~~~~~Aa---~-g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 297 KWVPADAKAAEAHFEKAV---G-REVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp SSSCCCHHHHHHHHHTTT---T-TCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHHHHHh---C-CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 122348888888888888 6 568888888888876 348888888888888754
No 177
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.35 E-value=4.9e-12 Score=111.15 Aligned_cols=114 Identities=12% Similarity=0.104 Sum_probs=103.1
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhh----------------cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHH
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNN----------------KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKY 94 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~----------------~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~ 94 (259)
....+..++ .. |++++|+..|+++++ .+|.++.++.++|.+|..+|++.
T Consensus 226 ~~~~g~~~~--~~-g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~------------ 290 (370)
T 1ihg_A 226 LKNIGNTFF--KS-QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQ------------ 290 (370)
T ss_dssp HHHHHHHHH--HT-TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHH------------
T ss_pred HHHHHHHHH--Hh-cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHH------------
Confidence 345566677 56 999999999999998 88999999999999999999875
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhh
Q psy9159 95 ILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEIS 171 (259)
Q Consensus 95 ~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~ 171 (259)
+|+.+++++++++|+++.+++.+|.++..++++. +|...+++|++++|++..++..++.++...+
T Consensus 291 --~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~----------eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~ 355 (370)
T 1ihg_A 291 --GAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYD----------QALADLKKAQEIAPEDKAIQAELLKVKQKIK 355 (370)
T ss_dssp --HHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887 5678999999999999999999999887653
No 178
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.35 E-value=3.2e-11 Score=101.87 Aligned_cols=139 Identities=9% Similarity=-0.042 Sum_probs=107.9
Q ss_pred CCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHH------HHHHHHHHHHhhchhhHHH
Q psy9159 61 QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNT------QKWYGICVGANGQFQSLKE 134 (259)
Q Consensus 61 ~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~------~~~la~~~~~~~~~~~~~~ 134 (259)
+|+....+...+..+...|++. +|++.++++++..|..... ++.+|.++...|++.
T Consensus 71 ~~~~~~~l~~~~~~~~~~~~y~--------------~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 132 (293)
T 2qfc_A 71 DIERKKQFKDQVIMLCKQKRYK--------------EIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYE---- 132 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHH----
T ss_pred chhHHHHHHHHHHHHHHhhhHH--------------HHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHH----
Confidence 3455566667777777777764 9999999999999886643 333445554455554
Q ss_pred HHhcHHHHHHHHHHHHccCCCC------hhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHH---h
Q psy9159 135 KIKCGVVFRDQMNKAIQMAPKD------FTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAE---E 205 (259)
Q Consensus 135 ~~~~~~~a~~~~~kAl~l~P~~------~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi---~ 205 (259)
.|...+++++++.+.. ..+++.+|.+|... |++++|+.+|++|+ +
T Consensus 133 ------~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~--------------------~~~~~A~~~~~kal~~~~ 186 (293)
T 2qfc_A 133 ------YCILELKKLLNQQLTGIDVYQNLYIENAIANIYAEN--------------------GYLKKGIDLFEQILKQLE 186 (293)
T ss_dssp ------HHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHHHH
Confidence 5788999999876654 45888999988874 88999999999999 4
Q ss_pred hCCCCc----HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 206 LAPAPW----KENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 206 l~P~~~----~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
..| +. ..++.++|.+|..+|++++|++++++++++.+.
T Consensus 187 ~~~-~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 187 ALH-DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HSC-CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hcC-ccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 556 32 257999999999999999999999999988643
No 179
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.34 E-value=1.5e-12 Score=92.53 Aligned_cols=75 Identities=13% Similarity=0.052 Sum_probs=67.4
Q ss_pred cCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHH
Q psy9159 152 MAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKA 231 (259)
Q Consensus 152 l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA 231 (259)
.+|+++.+|+.+|.+++.. |++++|+.+|+++++++| +++.+|+.+|.+|..+|++++|
T Consensus 2 ~~p~~~~~~~~lg~~~~~~--------------------g~~~~A~~~~~~al~~~p-~~~~a~~~lg~~~~~~g~~~~A 60 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKH--------------------DNASRALALFEELVETDP-DYVGTYYHLGKLYERLDRTDDA 60 (100)
T ss_dssp ---CCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHST-TCTHHHHHHHHHHHHTTCHHHH
T ss_pred CCccCHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHH
Confidence 5899999999999999875 889999999999999999 7889999999999999999999
Q ss_pred HHHHHHHhcCCCCCcc
Q psy9159 232 VQWLDKAKAIPVVSYE 247 (259)
Q Consensus 232 ~~~~~kal~l~p~~~~ 247 (259)
++.|++++++.|.+.+
T Consensus 61 ~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 61 IDTYAQGIEVAREEGT 76 (100)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhhhhcCCc
Confidence 9999999999876554
No 180
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.32 E-value=6.4e-12 Score=111.06 Aligned_cols=174 Identities=16% Similarity=0.128 Sum_probs=132.6
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHH-----------------HHHHHHHHHHHhhchhcccCcHHHH
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPD-----------------VLYRLAKACHCLYDIKRRENDKEAS 91 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~-----------------~~~~la~~~~~~g~~~~~~~~~~~~ 91 (259)
...++++..++ .. |+|++|++.|.++++..|+..+ ++..+|.+|...|++.
T Consensus 5 ~~~l~~a~~l~--~~-~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~--------- 72 (434)
T 4b4t_Q 5 GSKLEEARRLV--NE-KQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKD--------- 72 (434)
T ss_dssp THHHHHHHHHH--HH-TCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHH---------
T ss_pred HHHHHHHHHHH--HC-CCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHH---------
Confidence 45688898898 66 9999999999999999887653 5788999999999875
Q ss_pred HHHHHHHHHHHHHHHHhCCCChHHHH------HHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccC------CCChhH
Q psy9159 92 EKYILQGIEYAKKAMELAPNNSNTQK------WYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMA------PKDFTL 159 (259)
Q Consensus 92 ~~~~~~A~~~~~kal~~~P~~~~~~~------~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~------P~~~~~ 159 (259)
+|.+++++++++.+....+.. .++.++...|++. .+...+++++... +.-..+
T Consensus 73 -----~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~a~~~~~~~~~~~~~~~~~~~~~~~ 137 (434)
T 4b4t_Q 73 -----KLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLD----------DQIFVCEKSIEFAKREKRVFLKHSL 137 (434)
T ss_dssp -----HHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHH----------HHHHHHHHHHHHHHHSSCCSSHHHH
T ss_pred -----HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHH----------HHHHHHHHHHHHHHHhCccHHHHHH
Confidence 999999999988877655421 2233322233333 3455666665543 334568
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh------CCCCcHHhHHHHHHHHHHhCCHHHHHH
Q psy9159 160 YSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL------APAPWKENQLLIAKCYIEAGEYAKAVQ 233 (259)
Q Consensus 160 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l------~P~~~~~~~~~la~~~~~~g~~~eA~~ 233 (259)
+..+|.++... |+|++|+.++++++.. .| ....++..+|.+|..+|++++|..
T Consensus 138 ~~~la~~~~~~--------------------g~~~~A~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~ 196 (434)
T 4b4t_Q 138 SIKLATLHYQK--------------------KQYKDSLALINDLLREFKKLDDKP-SLVDVHLLESKVYHKLRNLAKSKA 196 (434)
T ss_dssp HHHHHHHHHHH--------------------TCHHHHHHHHHHHHHHHTTSSCST-HHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHc--------------------cChHHHHHHHHHHHHHHHhcccch-hHHHHHHHHHHHHHHhCcHHHHHH
Confidence 88999998875 8899999999999886 23 335679999999999999999999
Q ss_pred HHHHHhcCCCCCccchh
Q psy9159 234 WLDKAKAIPVVSYESHD 250 (259)
Q Consensus 234 ~~~kal~l~p~~~~~~~ 250 (259)
.+++++.+.+..+.+..
T Consensus 197 ~~~~al~~~~~~~~~~~ 213 (434)
T 4b4t_Q 197 SLTAARTAANSIYCPTQ 213 (434)
T ss_dssp HHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHhhcCCCchH
Confidence 99999988776655443
No 181
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.31 E-value=1.7e-11 Score=88.76 Aligned_cols=101 Identities=10% Similarity=-0.010 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchH
Q psy9159 97 QGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFF 176 (259)
Q Consensus 97 ~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~ 176 (259)
+|++.++++++.+|+++.++..+|.++...|++. .+...++++++++|+++.+|+.+|.++...
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~----------~A~~~~~~al~~~p~~~~~~~~la~~~~~~------ 66 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFD----------AALPHLRAALDFDPTYSVAWKWLGKTLQGQ------ 66 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHH----------HHHHHHHHHHHHCCCcHHHHHHHHHHHHHc------
Confidence 6789999999999999999999999999999887 567899999999999999999999999875
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCC-cHHhHHHHHHHHHHhCC
Q psy9159 177 ERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAP-WKENQLLIAKCYIEAGE 227 (259)
Q Consensus 177 ~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~-~~~~~~~la~~~~~~g~ 227 (259)
|++++|+.+|+++++++|+. .......+...+..+++
T Consensus 67 --------------g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 67 --------------GDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred --------------CCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhcc
Confidence 88999999999999998821 23344455555544443
No 182
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.3e-12 Score=93.29 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=84.0
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCC
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEP 191 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g 191 (259)
++.++..+|.++...|++. .+...++++++++|+++.+|+.+|.++... |
T Consensus 3 ~~~~~~~~g~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------------g 52 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYR----------EAVHCYDQLITAQPQNPVGYSNKAMALIKL--------------------G 52 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------T
T ss_pred hHHHHHHHHHHHHHcCCHH----------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHh--------------------c
Confidence 4677888999999998887 567899999999999999999999999875 8
Q ss_pred cHHHHHHHHHHHHhhCCCCc------HHhHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9159 192 TAEDAIANCLKAEELAPAPW------KENQLLIAKCYIEAGEYAKAVQWLDKA 238 (259)
Q Consensus 192 ~~~eAi~~~~kAi~l~P~~~------~~~~~~la~~~~~~g~~~eA~~~~~ka 238 (259)
++++|+.+|+++++++| ++ ..++..+|.++..+|++++|++.+++.
T Consensus 53 ~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 53 EYTQAIQMCQQGLRYTS-TAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp CHHHHHHHHHHHHTSCS-STTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSSC
T ss_pred CHHHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHHh
Confidence 89999999999999999 66 778899999999999888887766543
No 183
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.25 E-value=3.4e-11 Score=101.68 Aligned_cols=122 Identities=9% Similarity=-0.039 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHhCCCChHHH------HHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChh------HHHH
Q psy9159 95 ILQGIEYAKKAMELAPNNSNTQ------KWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFT------LYSL 162 (259)
Q Consensus 95 ~~~A~~~~~kal~~~P~~~~~~------~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~------~~~~ 162 (259)
+++|...++++++..|.++... ..+|.++...+++. .|...+++|+++.+.... ++..
T Consensus 91 y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~Ai~~~~~al~~~~~~~~~~~~~~~~~~ 160 (293)
T 3u3w_A 91 YKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYE----------YCILELKKLLNQQLTGIDVYQNLYIENA 160 (293)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHH----------HHHHHHHHHHHTCCCCSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHH----------HHHHHHHHHHHHhcccccHHHHHHHHHH
Confidence 4599999999999988887732 12444444444444 578899999997665443 6889
Q ss_pred HHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh------CCCCcHHhHHHHHHHHHHhCCHHHHHHHHH
Q psy9159 163 KGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL------APAPWKENQLLIAKCYIEAGEYAKAVQWLD 236 (259)
Q Consensus 163 lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l------~P~~~~~~~~~la~~~~~~g~~~eA~~~~~ 236 (259)
+|.+|... |++++|+.+|++|++. ++.....++.++|.+|..+|++++|+++++
T Consensus 161 lg~~y~~~--------------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~ 220 (293)
T 3u3w_A 161 IANIYAEN--------------------GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVN 220 (293)
T ss_dssp HHHHHHHT--------------------TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHc--------------------CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99988875 8899999999999953 211334579999999999999999999999
Q ss_pred HHhcCCCCCc
Q psy9159 237 KAKAIPVVSY 246 (259)
Q Consensus 237 kal~l~p~~~ 246 (259)
+++++.+...
T Consensus 221 ~al~~~~~~~ 230 (293)
T 3u3w_A 221 KAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999876543
No 184
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.24 E-value=7.1e-11 Score=81.07 Aligned_cols=85 Identities=20% Similarity=0.234 Sum_probs=64.4
Q ss_pred CChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCC
Q psy9159 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDE 190 (259)
Q Consensus 111 ~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (259)
+++.++..+|.++...+++. .+...++++++++|+++.+++.+|.++...
T Consensus 7 ~~~~~~~~la~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-------------------- 56 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYD----------EAIEYYQKALELDPNNAEAWYNLGNAYYKQ-------------------- 56 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT--------------------
T ss_pred ccHHHHHHHHHHHHHccCHH----------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHH--------------------
Confidence 35667777777777777766 456777888888888888888888877664
Q ss_pred CcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhC
Q psy9159 191 PTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAG 226 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g 226 (259)
|++++|+.+|+++++++| ++..++..+|.++..+|
T Consensus 57 ~~~~~A~~~~~~a~~~~p-~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 57 GDYDEAIEYYQKALELDP-NNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp TCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHhcC
Confidence 678888888888888888 66777888888777654
No 185
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.23 E-value=1.3e-10 Score=100.82 Aligned_cols=106 Identities=9% Similarity=0.033 Sum_probs=82.2
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCCH------HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC------
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPNDP------DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA------ 109 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~~------~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~------ 109 (259)
.. |++++|...+++++...|... .++..+|.++...|++. +|+..+++++++.
T Consensus 65 ~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~--------------~A~~~~~~al~~~~~~~~~ 129 (373)
T 1hz4_A 65 CK-GELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQ--------------TAWETQEKAFQLINEQHLE 129 (373)
T ss_dssp HH-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHTTCT
T ss_pred hc-CcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHHHHHHhccc
Confidence 45 999999999999998765432 33677899999888875 8999999998876
Q ss_pred --CCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC-----hhHHHHHHHHHHHhhc
Q psy9159 110 --PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD-----FTLYSLKGRYQYEISK 172 (259)
Q Consensus 110 --P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~-----~~~~~~lG~~~~~~~~ 172 (259)
|....++..+|.++...|++. .+...+++++++.|.. ..++..+|.++...++
T Consensus 130 ~~~~~~~~~~~la~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~ 189 (373)
T 1hz4_A 130 QLPMHEFLVRIRAQLLWAWARLD----------EAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGD 189 (373)
T ss_dssp TSTHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCC
Confidence 334566777899998888887 5678889999988763 3467788888877643
No 186
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.21 E-value=4.5e-10 Score=97.63 Aligned_cols=141 Identities=16% Similarity=0.068 Sum_probs=106.4
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN 112 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~ 112 (259)
.++-.++...+...+.+|+.+|+++++.+|+++.++-.++.+|........ ... ........++. ...++..+|.+
T Consensus 201 Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~--~~~-~~~~~l~~a~~-a~~a~~~~~~~ 276 (372)
T 3ly7_A 201 YQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHP--LDE-KQLAALNTEID-NIVTLPELNNL 276 (372)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSC--CCH-HHHHHHHHHHH-HHHTCGGGTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCC--Cch-hhHHHHHHHHH-HHHhcccCCcC
Confidence 444444421334678999999999999999999999999999985432210 111 22233344444 22466888999
Q ss_pred hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCc
Q psy9159 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPT 192 (259)
Q Consensus 113 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 192 (259)
+.++..++.++...|+++ .+...+++|++++|+ +.+|..+|.++... |+
T Consensus 277 a~~~~alal~~l~~gd~d----------~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~--------------------G~ 325 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTD----------ESYQAINTGIDLEMS-WLNYVLLGKVYEMK--------------------GM 325 (372)
T ss_dssp HHHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHCCC-HHHHHHHHHHHHHT--------------------TC
T ss_pred HHHHHHHHHHHHhCCCHH----------HHHHHHHHHHhcCCC-HHHHHHHHHHHHHC--------------------CC
Confidence 999999998888788887 567899999999985 78888999877653 89
Q ss_pred HHHHHHHHHHHHhhCC
Q psy9159 193 AEDAIANCLKAEELAP 208 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P 208 (259)
+++|+++|.+|+.++|
T Consensus 326 ~~eA~e~~~~AlrL~P 341 (372)
T 3ly7_A 326 NREAADAYLTAFNLRP 341 (372)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999999999999
No 187
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.21 E-value=4.7e-10 Score=95.69 Aligned_cols=159 Identities=7% Similarity=-0.134 Sum_probs=124.7
Q ss_pred CCcCCHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC----ChHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQP--NDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN----NSNT 115 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p--~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~----~~~~ 115 (259)
.. |++++|+..+.+.+..+| ++.+++..++.++..+|+.. .|...+++..+.+|+ +...
T Consensus 112 ~~-g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d--------------~A~k~l~~~~~~~~d~~~~~d~~ 176 (310)
T 3mv2_B 112 IL-GDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVS--------------TASTIFDNYTNAIEDTVSGDNEM 176 (310)
T ss_dssp HH-TCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHSCHHHHHHHHH
T ss_pred Hc-CCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHH--------------HHHHHHHHHHhcCccccccchHH
Confidence 44 999999999999999887 89999999999999999875 999999999999993 2223
Q ss_pred HHHH--HHHHHHhh--chhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCC
Q psy9159 116 QKWY--GICVGANG--QFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEP 191 (259)
Q Consensus 116 ~~~l--a~~~~~~~--~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g 191 (259)
...+ +++....| ++. .+...|+++.+..|+.......++ ++..+ |
T Consensus 177 l~~Laea~v~l~~g~~~~q----------~A~~~f~El~~~~p~~~~~~lLln-~~~~~--------------------g 225 (310)
T 3mv2_B 177 ILNLAESYIKFATNKETAT----------SNFYYYEELSQTFPTWKTQLGLLN-LHLQQ--------------------R 225 (310)
T ss_dssp HHHHHHHHHHHHHTCSTTT----------HHHHHHHHHHTTSCSHHHHHHHHH-HHHHH--------------------T
T ss_pred HHHHHHHHHHHHhCCccHH----------HHHHHHHHHHHhCCCcccHHHHHH-HHHHc--------------------C
Confidence 3333 44444444 333 467888999988887222222222 45443 8
Q ss_pred cHHHHHHHHHHHHhh----------CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccch
Q psy9159 192 TAEDAIANCLKAEEL----------APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESH 249 (259)
Q Consensus 192 ~~~eAi~~~~kAi~l----------~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~~ 249 (259)
++++|...++..+++ +| +++.+..++..+...+|+ +|.+++.++.+.+|+++.-+
T Consensus 226 ~~~eAe~~L~~l~~~~p~~~~k~~~~p-~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~ 290 (310)
T 3mv2_B 226 NIAEAQGIVELLLSDYYSVEQKENAVL-YKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIK 290 (310)
T ss_dssp CHHHHHHHHHHHHSHHHHTTTCHHHHS-SHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHhcccccccccCCC-CCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHH
Confidence 899999999988887 58 678989899999999998 99999999999999988643
No 188
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.19 E-value=1.7e-10 Score=79.18 Aligned_cols=85 Identities=25% Similarity=0.318 Sum_probs=77.2
Q ss_pred CCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHH
Q psy9159 62 PNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVV 141 (259)
Q Consensus 62 p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~ 141 (259)
|.++.+++.+|.++...|++. +|+..++++++++|+++.++..+|.++...+++. .
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~--------------~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~----------~ 61 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYD--------------EAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYD----------E 61 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH----------H
T ss_pred cccHHHHHHHHHHHHHccCHH--------------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHH----------H
Confidence 456889999999999999875 9999999999999999999999999999999887 5
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHHh
Q psy9159 142 FRDQMNKAIQMAPKDFTLYSLKGRYQYEI 170 (259)
Q Consensus 142 a~~~~~kAl~l~P~~~~~~~~lG~~~~~~ 170 (259)
+...++++++++|+++.++..+|.++...
T Consensus 62 A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 62 AIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 67899999999999999999999988653
No 189
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.17 E-value=2e-10 Score=97.93 Aligned_cols=159 Identities=13% Similarity=0.076 Sum_probs=123.9
Q ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHhh
Q psy9159 50 AYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP--NNSNTQKWYGICVGANG 127 (259)
Q Consensus 50 A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P--~~~~~~~~la~~~~~~~ 127 (259)
|+..+++.+...+.++.+++.+|.++...|++. +|+..+.++|..+| ++.++....+.++...|
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~e--------------eAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~ 150 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLD--------------KSLETCVEGIDNDEAEGTTELLLLAIEVALLNN 150 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHH--------------HHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCC
Confidence 788888888877777888899999999999875 99999999999997 89999999999999998
Q ss_pred chhhHHHHHhcHHHHHHHHHHHHccCCC----ChhHHHHHHHH--HHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHH
Q psy9159 128 QFQSLKEKIKCGVVFRDQMNKAIQMAPK----DFTLYSLKGRY--QYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCL 201 (259)
Q Consensus 128 ~~~~~~~~~~~~~~a~~~~~kAl~l~P~----~~~~~~~lG~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~ 201 (259)
+.. .|.+.+++..+.+|+ +-.+...++.. .+..+ .+++.+|+..|+
T Consensus 151 r~d----------~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g------------------~~~~q~A~~~f~ 202 (310)
T 3mv2_B 151 NVS----------TASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATN------------------KETATSNFYYYE 202 (310)
T ss_dssp CHH----------HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHT------------------CSTTTHHHHHHH
T ss_pred CHH----------HHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhC------------------CccHHHHHHHHH
Confidence 876 567888888899994 23444444433 33322 158999999999
Q ss_pred HHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC-------Cccchhhh
Q psy9159 202 KAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV-------SYESHDLS 252 (259)
Q Consensus 202 kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~-------~~~~~~~~ 252 (259)
++.+..| ++.....-+. +++.+|++++|.+.+++++++.|. ++++..++
T Consensus 203 El~~~~p-~~~~~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 203 ELSQTFP-TWKTQLGLLN-LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp HHHTTSC-SHHHHHHHHH-HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred HHHHhCC-CcccHHHHHH-HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 9998888 5333333333 999999999999999998888644 34555555
No 190
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.17 E-value=1.4e-10 Score=97.74 Aligned_cols=136 Identities=10% Similarity=-0.053 Sum_probs=114.0
Q ss_pred HHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC-C
Q psy9159 34 EIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN-N 112 (259)
Q Consensus 34 ~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~-~ 112 (259)
-+..+. .. |+|++|.+.|..++...|+++ +.+.+|.++...+++. +|+..+++++...++ .
T Consensus 108 yA~~L~--~~-g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~--------------dA~~~l~~a~~~~d~~~ 169 (282)
T 4f3v_A 108 FAACEA--AQ-GNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWT--------------DVIDQVKSAGKWPDKFL 169 (282)
T ss_dssp HHHHHH--HH-TCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHH--------------HHHHHHTTGGGCSCHHH
T ss_pred HHHHHH--HC-CCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHH--------------HHHHHHHHhhccCCccc
Confidence 444555 55 999999999999999999999 9999999999999875 999999988775322 1
Q ss_pred -hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccC--CC-ChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 113 -SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMA--PK-DFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 113 -~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~--P~-~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
..+++++|.++..+|++. +|+..|++++.-. |. .+.+++.+|.++.++
T Consensus 170 ~~~a~~~LG~al~~LG~~~----------eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~l------------------ 221 (282)
T 4f3v_A 170 AGAAGVAHGVAAANLALFT----------EAERRLTEANDSPAGEACARAIAWYLAMARRSQ------------------ 221 (282)
T ss_dssp HHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHHHHHHHHCCCHH----------HHHHHHHHHhcCCCCccccHHHHHHHHHHHHHc------------------
Confidence 458999999999999988 5678999998655 66 667999999998886
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCcHHhHHHHH
Q psy9159 189 DEPTAEDAIANCLKAEELAPAPWKENQLLIA 219 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la 219 (259)
|+.++|...|+++++.+| + ..++..|.
T Consensus 222 --Gr~deA~~~l~~a~a~~P-~-~~~~~aL~ 248 (282)
T 4f3v_A 222 --GNESAAVALLEWLQTTHP-E-PKVAAALK 248 (282)
T ss_dssp --TCHHHHHHHHHHHHHHSC-C-HHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCC-c-HHHHHHHh
Confidence 889999999999999999 6 76665553
No 191
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.13 E-value=9.5e-11 Score=82.21 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=78.1
Q ss_pred HHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChh-HHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHH
Q psy9159 117 KWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFT-LYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAED 195 (259)
Q Consensus 117 ~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~-~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e 195 (259)
+..|.++...|++. .+...++++++++|+++. +++.+|.++... |++++
T Consensus 4 ~~~a~~~~~~~~~~----------~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~--------------------~~~~~ 53 (99)
T 2kc7_A 4 LKTIKELINQGDIE----------NALQALEEFLQTEPVGKDEAYYLMGNAYRKL--------------------GDWQK 53 (99)
T ss_dssp HHHHHHHHHHTCHH----------HHHHHHHHHHHHCSSTHHHHHHHHHHHHHHH--------------------TCHHH
T ss_pred HHHHHHHHHcCCHH----------HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHc--------------------CCHHH
Confidence 35666777777776 577899999999999999 999999999875 78999
Q ss_pred HHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 196 AIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 196 Ai~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
|+.+|+++++++| ++..++.+ +.+.+++..|+++...+|+++..
T Consensus 54 A~~~~~~al~~~p-~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~~~~ 97 (99)
T 2kc7_A 54 ALNNYQSAIELNP-DSPALQAR--------KMVMDILNFYNKDMYNQLEHHHH 97 (99)
T ss_dssp HHHHHHHHHHHCT-TSTHHHHH--------HHHHHHHHHHCCTTHHHHCCSSC
T ss_pred HHHHHHHHHhcCC-CcHHHHHH--------HHHHHHHHHHHHHhccCcccccC
Confidence 9999999999999 66776643 67889999999999998887653
No 192
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.13 E-value=5.1e-10 Score=79.53 Aligned_cols=85 Identities=6% Similarity=-0.029 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHH
Q psy9159 64 DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFR 143 (259)
Q Consensus 64 ~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~ 143 (259)
++++++.+|.++...|++. +|+..++++++++|+++.++..+|.++...|++. .+.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~--------------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~----------~A~ 58 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYR--------------EAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYT----------QAI 58 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHH--------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH----------HHH
T ss_pred hHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHH----------HHH
Confidence 4688999999999999875 9999999999999999999999999999999987 567
Q ss_pred HHHHHHHccCCCC------hhHHHHHHHHHHHhhc
Q psy9159 144 DQMNKAIQMAPKD------FTLYSLKGRYQYEISK 172 (259)
Q Consensus 144 ~~~~kAl~l~P~~------~~~~~~lG~~~~~~~~ 172 (259)
..++++++++|++ ..+++.+|.++...+.
T Consensus 59 ~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 93 (111)
T 2l6j_A 59 QMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGS 93 (111)
T ss_dssp HHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999 8889999998877643
No 193
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.11 E-value=2.5e-09 Score=80.43 Aligned_cols=115 Identities=17% Similarity=0.106 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhc
Q psy9159 93 KYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISK 172 (259)
Q Consensus 93 ~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~ 172 (259)
+++++|+.+++++.+..+ +.+. +|.++....... ++.+.+++|.+. .++.+++.||.+|..
T Consensus 9 ~d~~~A~~~~~~aa~~g~--~~a~--lg~~y~~g~~~~----------~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~--- 69 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNE--MFGC--LSLVSNSQINKQ----------KLFQYLSKACEL--NSGNGCRFLGDFYEN--- 69 (138)
T ss_dssp HHHHHHHHHHHHHHHTTC--TTHH--HHHHTCTTSCHH----------HHHHHHHHHHHT--TCHHHHHHHHHHHHH---
T ss_pred cCHHHHHHHHHHHHcCCC--Hhhh--HHHHHHcCCCHH----------HHHHHHHHHHcC--CCHHHHHHHHHHHHc---
Confidence 457899999999999874 4444 777765544333 377899999887 789999999998875
Q ss_pred cchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHH----hCCHHHHHHHHHHHhcCC
Q psy9159 173 LSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIE----AGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~----~g~~~eA~~~~~kal~l~ 242 (259)
|....+++++|+.+|++|.+.. ++.++++||.+|.. .+++++|+++|++|.+..
T Consensus 70 -------------G~g~~~d~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 70 -------------GKYVKKDLRKAAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp -------------CSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred -------------CCCCCccHHHHHHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 1112478999999999999973 48899999999999 899999999999999985
No 194
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.11 E-value=2.4e-10 Score=85.91 Aligned_cols=129 Identities=14% Similarity=-0.030 Sum_probs=99.7
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCH------HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHH
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDP------DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAM 106 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~------~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal 106 (259)
..+..++ .. |++++|+..++++++..|... .++..+|.++...|++. +|+.++++++
T Consensus 14 ~l~~~~~--~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~a~ 76 (164)
T 3ro3_A 14 NLGNTHY--LL-GNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFE--------------TASEYYKKTL 76 (164)
T ss_dssp HHHHHHH--HT-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHH
T ss_pred HHHHHHH--Hh-cCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHH
Confidence 3444455 56 999999999999998765432 47888999999888875 8999999998
Q ss_pred HhCCCC------hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCC------ChhHHHHHHHHHHHhhccc
Q psy9159 107 ELAPNN------SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPK------DFTLYSLKGRYQYEISKLS 174 (259)
Q Consensus 107 ~~~P~~------~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~------~~~~~~~lG~~~~~~~~~~ 174 (259)
++.|.. ..++..+|.++...|++. .+...+++++++.+. .+.++..+|.++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~---- 142 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYE----------KAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTAL---- 142 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHH----------HHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHc----
Confidence 887654 567788888888888887 456677777766332 245678888887765
Q ss_pred hHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCC
Q psy9159 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAP 208 (259)
Q Consensus 175 ~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P 208 (259)
|++++|+.++++++++..
T Consensus 143 ----------------g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 143 ----------------GNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHT
T ss_pred ----------------cCHHHHHHHHHHHHHHHH
Confidence 889999999999999865
No 195
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.09 E-value=1.7e-10 Score=80.93 Aligned_cols=93 Identities=19% Similarity=0.244 Sum_probs=77.4
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHH-HHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPD-VLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA 109 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~-~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~ 109 (259)
.+..+..++ .. |++++|+..++++++.+|+++. +++.+|.+|..+|++. +|+..++++++++
T Consensus 3 ~~~~a~~~~--~~-~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~--------------~A~~~~~~al~~~ 65 (99)
T 2kc7_A 3 QLKTIKELI--NQ-GDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQ--------------KALNNYQSAIELN 65 (99)
T ss_dssp THHHHHHHH--HH-TCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHC
T ss_pred HHHHHHHHH--Hc-CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHhcC
Confidence 356677777 56 9999999999999999999999 9999999999999875 9999999999999
Q ss_pred CCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChh
Q psy9159 110 PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFT 158 (259)
Q Consensus 110 P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~ 158 (259)
|+++.++.+ +.+. ++...+++++.++|+++.
T Consensus 66 p~~~~~~~~--------~~~~----------~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 66 PDSPALQAR--------KMVM----------DILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp TTSTHHHHH--------HHHH----------HHHHHHCCTTHHHHCCSS
T ss_pred CCcHHHHHH--------HHHH----------HHHHHHHHHhccCccccc
Confidence 999998744 1111 345677888888887753
No 196
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.08 E-value=9.9e-10 Score=77.72 Aligned_cols=86 Identities=17% Similarity=0.143 Sum_probs=70.8
Q ss_pred cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcH
Q psy9159 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCG 139 (259)
Q Consensus 60 ~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~ 139 (259)
.+|+++.+++.+|.+|...|++. +|+..++++++++|+++.+|..+|.++...|++.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~--------------~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~--------- 58 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNAS--------------RALALFEELVETDPDYVGTYYHLGKLYERLDRTD--------- 58 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHH---------
T ss_pred CCccCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH---------
Confidence 47999999999999999999875 9999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHccCCCChhH--HHHHHHHHHH
Q psy9159 140 VVFRDQMNKAIQMAPKDFTL--YSLKGRYQYE 169 (259)
Q Consensus 140 ~~a~~~~~kAl~l~P~~~~~--~~~lG~~~~~ 169 (259)
.|...+++++++.|++... ...++.++..
T Consensus 59 -~A~~~~~~al~l~~~~~~~~~~~~l~~~l~~ 89 (100)
T 3ma5_A 59 -DAIDTYAQGIEVAREEGTQKDLSELQDAKLK 89 (100)
T ss_dssp -HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhhhhcCCchhHHHHHHHHHHH
Confidence 5678999999998865443 3444444433
No 197
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.07 E-value=4e-10 Score=88.75 Aligned_cols=129 Identities=12% Similarity=0.019 Sum_probs=100.2
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhh------cCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHH
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNN------KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAM 106 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~------~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal 106 (259)
..+..+. .. |++++|+..+++++. ..|..+.++..+|.++...|++. +|+.++++++
T Consensus 31 ~l~~~~~--~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--------------~A~~~~~~al 93 (203)
T 3gw4_A 31 MLGYVYA--FM-DRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWD--------------AARRCFLEER 93 (203)
T ss_dssp HHHHHHH--HT-TCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHH
T ss_pred HHHHHHH--Hh-CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHH
Confidence 3344444 56 999999999999998 66777889999999999999875 8999999999
Q ss_pred Hh---CCCC----hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC------hhHHHHHHHHHHHhhcc
Q psy9159 107 EL---APNN----SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD------FTLYSLKGRYQYEISKL 173 (259)
Q Consensus 107 ~~---~P~~----~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~------~~~~~~lG~~~~~~~~~ 173 (259)
++ .|++ ..++..+|.++...|++. .+...+++++++.+.. ..++..+|.++...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~--- 160 (203)
T 3gw4_A 94 ELLASLPEDPLAASANAYEVATVALHFGDLA----------GARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQE--- 160 (203)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHHHHHHTCHH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---
T ss_pred HHHHHcCccHHHHHHHHHHHHHHHHHhCCHH----------HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHC---
Confidence 88 4433 456788899998888887 4567777777654322 23457788887764
Q ss_pred chHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCC
Q psy9159 174 SFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAP 208 (259)
Q Consensus 174 ~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P 208 (259)
|++++|+.++++++++..
T Consensus 161 -----------------g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 161 -----------------KNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp -----------------TCHHHHHHHHHHHHHHHH
T ss_pred -----------------cCHHHHHHHHHHHHHHHH
Confidence 889999999999999864
No 198
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.06 E-value=8.1e-10 Score=92.63 Aligned_cols=119 Identities=9% Similarity=0.013 Sum_probs=96.4
Q ss_pred hhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHh-----hchh
Q psy9159 58 NNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN--NSNTQKWYGICVGAN-----GQFQ 130 (259)
Q Consensus 58 ~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~--~~~~~~~la~~~~~~-----~~~~ 130 (259)
-+.+|+++++++..|.+....-.... ..-..+....+|+..+++|+++||+ +..+|..+|.++... |+.+
T Consensus 145 ~~~~~~dve~L~W~ai~~ss~a~~~~---gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~e 221 (301)
T 3u64_A 145 SRCTRVDVGTLYWVGTGYVAAFALTP---LGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGME 221 (301)
T ss_dssp TTCCGGGHHHHHHHHHHHHHHHTTSC---TTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHH
T ss_pred HHcCccccHHHHHHHHHHHHHHhcCC---CChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHH
Confidence 44679999999999999876322110 0013466778999999999999999 677999999999885 4544
Q ss_pred hHHHHHhcHHHHHHHHHHHHccCCCC-hhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCC
Q psy9159 131 SLKEKIKCGVVFRDQMNKAIQMAPKD-FTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAP 208 (259)
Q Consensus 131 ~~~~~~~~~~~a~~~~~kAl~l~P~~-~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P 208 (259)
++.++|++||+++|+. ..+++.+|.++... .|++++|..++++|++.+|
T Consensus 222 ----------kA~~~ferAL~LnP~~~id~~v~YA~~l~~~-------------------~gd~~~a~~~L~kAL~a~p 271 (301)
T 3u64_A 222 ----------KAHTAFEHLTRYCSAHDPDHHITYADALCIP-------------------LNNRAGFDEALDRALAIDP 271 (301)
T ss_dssp ----------HHHHHHHHHHHHCCTTCSHHHHHHHHHTTTT-------------------TTCHHHHHHHHHHHHHCCG
T ss_pred ----------HHHHHHHHHHHhCCCCCchHHHHHHHHHHHh-------------------cCCHHHHHHHHHHHHcCCC
Confidence 6789999999999985 99999999987652 3889999999999999998
No 199
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.06 E-value=1.4e-09 Score=76.39 Aligned_cols=82 Identities=13% Similarity=0.022 Sum_probs=71.1
Q ss_pred CCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHH
Q psy9159 153 APKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAV 232 (259)
Q Consensus 153 ~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~ 232 (259)
+|+++.++..+|.+++..++ ....++|..++++|++++| +++.+.+.+|..++..|++++|+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~-----------------~~~~~~A~~~l~~AL~~dp-~~~rA~~~lg~~~~~~g~y~~Ai 63 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHK-----------------QAMTDEVSLLLEQALQLEP-YNEAALSLIANDHFISFRFQEAI 63 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTT-----------------TCCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcC-----------------CCCCHHHHHHHHHHHHHCc-CCHHHHHHHHHHHHHcCCHHHHH
Confidence 79999999999998876432 1337999999999999999 88999999999999999999999
Q ss_pred HHHHHHhcCCCCCccchhhh
Q psy9159 233 QWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 233 ~~~~kal~l~p~~~~~~~~~ 252 (259)
..++++++.+|.+++-..+.
T Consensus 64 ~~w~~~l~~~p~~~~~~~i~ 83 (93)
T 3bee_A 64 DTWVLLLDSNDPNLDRVTII 83 (93)
T ss_dssp HHHHHHHTCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCccHHHHH
Confidence 99999999999955544443
No 200
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.06 E-value=5.2e-09 Score=103.71 Aligned_cols=138 Identities=20% Similarity=0.112 Sum_probs=97.9
Q ss_pred CCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHH
Q psy9159 62 PNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVV 141 (259)
Q Consensus 62 p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~ 141 (259)
.+++.+|+.+|+++...|++. +|++.|.+| +++..+...+.++...|++++
T Consensus 1102 vn~p~vWsqLAKAql~~G~~k--------------EAIdsYiKA-----dD~say~eVa~~~~~lGkyEE---------- 1152 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVK--------------EAIDSYIKA-----DDPSSYMEVVQAANTSGNWEE---------- 1152 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHH--------------HHHHHHHhc-----CChHHHHHHHHHHHHcCCHHH----------
Confidence 477899999999999988875 888888776 788888888888888888873
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHH-----------HHHHHhcCCCCCcHHHHHHHHHHHHhhCCCC
Q psy9159 142 FRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERK-----------IAVLIVSDLDEPTAEDAIANCLKAEELAPAP 210 (259)
Q Consensus 142 a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~-----------~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~ 210 (259)
+.++|..|++.+|+. .+...+|..|.+.++++.++.. ++..++. .|+|++|+.+|.+|
T Consensus 1153 AIeyL~mArk~~~e~-~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~---eg~YeeA~~~Y~kA------- 1221 (1630)
T 1xi4_A 1153 LVKYLQMARKKARES-YVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYD---EKMYDAAKLLYNNV------- 1221 (1630)
T ss_pred HHHHHHHHHhhcccc-cccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHh---cCCHHHHHHHHHhh-------
Confidence 456666666666432 2222355555554433222211 1222222 58999999999997
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 211 WKENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 211 ~~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
..|..+|.+|.++|++++|++.+++|...
T Consensus 1222 --~ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1222 --SNFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred --hHHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 25788999999999999999999999443
No 201
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.01 E-value=6.4e-09 Score=78.17 Aligned_cols=124 Identities=18% Similarity=0.134 Sum_probs=97.5
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVG 124 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~ 124 (259)
+++++|+..|+++.+.... ++. +|.+|...+... +|+.+++++.+. +++.+++++|.++.
T Consensus 9 ~d~~~A~~~~~~aa~~g~~--~a~--lg~~y~~g~~~~--------------~A~~~~~~Aa~~--g~~~a~~~Lg~~y~ 68 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM--FGC--LSLVSNSQINKQ--------------KLFQYLSKACEL--NSGNGCRFLGDFYE 68 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT--THH--HHHHTCTTSCHH--------------HHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCH--hhh--HHHHHHcCCCHH--------------HHHHHHHHHHcC--CCHHHHHHHHHHHH
Confidence 6899999999999987644 444 888887765543 699999999987 78999999999987
Q ss_pred H----hhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHH
Q psy9159 125 A----NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANC 200 (259)
Q Consensus 125 ~----~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~ 200 (259)
. ..++. ++...+++|.+. .++.+++.||.+|.. |....+++++|+.+|
T Consensus 69 ~G~g~~~d~~----------~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~----------------G~g~~~d~~~A~~~~ 120 (138)
T 1klx_A 69 NGKYVKKDLR----------KAAQYYSKACGL--NDQDGCLILGYKQYA----------------GKGVVKNEKQAVKTF 120 (138)
T ss_dssp HCSSSCCCHH----------HHHHHHHHHHHT--TCHHHHHHHHHHHHH----------------TSSSCCCHHHHHHHH
T ss_pred cCCCCCccHH----------HHHHHHHHHHcC--CCHHHHHHHHHHHHC----------------CCCCCcCHHHHHHHH
Confidence 6 33433 678999999877 789999999998875 111247899999999
Q ss_pred HHHHhhCCCCcHHhHHHHH
Q psy9159 201 LKAEELAPAPWKENQLLIA 219 (259)
Q Consensus 201 ~kAi~l~P~~~~~~~~~la 219 (259)
++|.+... ..+..+|+
T Consensus 121 ~~Aa~~g~---~~A~~~l~ 136 (138)
T 1klx_A 121 EKACRLGS---EDACGILN 136 (138)
T ss_dssp HHHHHTTC---HHHHHHC-
T ss_pred HHHHHCCC---HHHHHHHh
Confidence 99999854 55665554
No 202
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.97 E-value=3.4e-08 Score=93.04 Aligned_cols=173 Identities=12% Similarity=-0.026 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHH-HHHHHHHHhCCCChHHHHHHHHHHHH
Q psy9159 47 KAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGI-EYAKKAMELAPNNSNTQKWYGICVGA 125 (259)
Q Consensus 47 ~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~-~~~~kal~~~P~~~~~~~~la~~~~~ 125 (259)
.+.....|++++...|.++++|+..+..+...|+.. +|+ ..+++|+...|.+...|..++.+...
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~--------------~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~ 390 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDS--------------TVITKYLKLGQQCIPNSAVLAFSLSEQYEL 390 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCT--------------THHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHH--------------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 455678899999999999999999999998888764 786 99999999999998888888888888
Q ss_pred hhchhhHHHHHhcHHHHHHHHHHHHcc-----------CCC-----------ChhHHHHHHHHHHHhhccchHHHHHHHH
Q psy9159 126 NGQFQSLKEKIKCGVVFRDQMNKAIQM-----------APK-----------DFTLYSLKGRYQYEISKLSFFERKIAVL 183 (259)
Q Consensus 126 ~~~~~~~~~~~~~~~~a~~~~~kAl~l-----------~P~-----------~~~~~~~lG~~~~~~~~~~~~~~~~~~~ 183 (259)
.|+++ .+...|++++.. .|+ ...+|....++..+.+.+......+..+
T Consensus 391 ~~~~e----------~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A 460 (679)
T 4e6h_A 391 NTKIP----------EIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKC 460 (679)
T ss_dssp TTCHH----------HHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hCCHH----------HHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 88766 345666666653 253 3456777777665555433221111111
Q ss_pred Hhc----------------CCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 184 IVS----------------DLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 184 ~~~----------------~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
.-. ....++++.|...|+++++..| +....|...+......|+.+.|..+|++|+...|.
T Consensus 461 ~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p-~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 461 RRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFA-TDGEYINKYLDFLIYVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSS
T ss_pred HHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 100 0112558999999999999999 77888888999999999999999999999998874
No 203
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.89 E-value=8.5e-08 Score=95.22 Aligned_cols=176 Identities=12% Similarity=0.090 Sum_probs=116.5
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
.+-|..+. .. |++++|++.|.++ ++++.+...|.++...|++. +|+++++.|.+.+|+
T Consensus 1109 sqLAKAql--~~-G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyE--------------EAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1109 SQLAKAQL--QK-GMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWE--------------ELVKYLQMARKKARE 1166 (1630)
T ss_pred HHHHHHHH--hC-CCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHhhccc
Confidence 44455555 55 9999999999886 88999999999999999875 999999999998855
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHH------HHh
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAV------LIV 185 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~------~~~ 185 (259)
+.+...+|.++.++++... ++..+ ++.+...+..+|..+++.+++..+...... +..
T Consensus 1167 -~~Idt~LafaYAKl~rlee--------------le~fI--~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~ 1229 (1630)
T 1xi4_A 1167 -SYVETELIFALAKTNRLAE--------------LEEFI--NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLAS 1229 (1630)
T ss_pred -ccccHHHHHHHHhhcCHHH--------------HHHHH--hCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHH
Confidence 3334468888888766542 12222 233345555677776666654322111110 000
Q ss_pred cCCCCCcHHHHHHHHHHHHhhCCC------------------------CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 186 SDLDEPTAEDAIANCLKAEELAPA------------------------PWKENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 186 ~~~~~g~~~eAi~~~~kAi~l~P~------------------------~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
.....|++++|++++.+|.+..+= .++..+..++..|...|.+++|+..+++++.+
T Consensus 1230 tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~L 1309 (1630)
T 1xi4_A 1230 TLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL 1309 (1630)
T ss_pred HHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Confidence 011247788888888877443320 01223446777889999999999999999999
Q ss_pred CCCCc
Q psy9159 242 PVVSY 246 (259)
Q Consensus 242 ~p~~~ 246 (259)
+|.+.
T Consensus 1310 eraH~ 1314 (1630)
T 1xi4_A 1310 ERAHM 1314 (1630)
T ss_pred ChhHh
Confidence 86654
No 204
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.83 E-value=2.1e-08 Score=70.31 Aligned_cols=74 Identities=9% Similarity=-0.039 Sum_probs=63.5
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
+|++++.+..+|.++...++..- ...+...+++||++||+++.+++.+|..+++.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~-------~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~------------------ 56 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAM-------TDEVSLLLEQALQLEPYNEAALSLIANDHFIS------------------ 56 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCC-------CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT------------------
T ss_pred CCCCHHHHHHHHHHHHHhcCCCC-------CHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHc------------------
Confidence 69999999999999876554210 11577899999999999999999999999885
Q ss_pred CCCcHHHHHHHHHHHHhhCCC
Q psy9159 189 DEPTAEDAIANCLKAEELAPA 209 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~ 209 (259)
|+|++|+.+|+++++.+|.
T Consensus 57 --g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 57 --FRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp --TCHHHHHHHHHHHHTCCCT
T ss_pred --CCHHHHHHHHHHHHhhCCC
Confidence 8899999999999999993
No 205
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.83 E-value=6.4e-10 Score=99.02 Aligned_cols=144 Identities=19% Similarity=0.160 Sum_probs=23.0
Q ss_pred cCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcc------c---------CcHHHHHHHHHHHHHHHHHHHHh
Q psy9159 44 KDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRR------E---------NDKEASEKYILQGIEYAKKAMEL 108 (259)
Q Consensus 44 ~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~------~---------~~~~~~~~~~~~A~~~~~kal~~ 108 (259)
.|+.++|++.+++. +++++|..+|.++...|++.+. . .......+.+++|+.+++.+.+.
T Consensus 16 ~~~ld~A~~fae~~-----~~~~vWs~La~A~l~~g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~ 90 (449)
T 1b89_A 16 IGNLDRAYEFAERC-----NEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKK 90 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHhC-----CChHHHHHHHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 37788888888887 3456888888888888876521 0 00112344455666666666554
Q ss_pred CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCC
Q psy9159 109 APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDL 188 (259)
Q Consensus 109 ~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (259)
.|+ +.+...++.++.++|++..+ .+.+ -.|+ ..+|..+|..|+..
T Consensus 91 ~~~-~~i~~~Li~~Y~Klg~l~e~----------e~f~-----~~pn-~~a~~~IGd~~~~~------------------ 135 (449)
T 1b89_A 91 ARE-SYVETELIFALAKTNRLAEL----------EEFI-----NGPN-NAHIQQVGDRCYDE------------------ 135 (449)
T ss_dssp -------------------CHHHH----------TTTT-----TCC----------------------------------
T ss_pred Ccc-chhHHHHHHHHHHhCCHHHH----------HHHH-----cCCc-HHHHHHHHHHHHHc------------------
Confidence 333 44444555555555554321 1111 1243 34777777777665
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9159 189 DEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKA 238 (259)
Q Consensus 189 ~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~ka 238 (259)
|+|++|+.+|.++ + .|..||.|+..+|++++|++.++++
T Consensus 136 --g~yeeA~~~Y~~a----~-----n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 136 --KMYDAAKLLYNNV----S-----NFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp ---CTTTHHHHHHHT----T-----CHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHh----h-----hHHHHHHHHHHhccHHHHHHHHHHc
Confidence 4555555555544 1 2444555555555555555555555
No 206
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.79 E-value=1.5e-07 Score=88.76 Aligned_cols=179 Identities=7% Similarity=-0.057 Sum_probs=122.5
Q ss_pred CCHHHHH-HHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh-----------CCC-
Q psy9159 45 DDKAKAY-NLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL-----------APN- 111 (259)
Q Consensus 45 ~~~~~A~-~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~-----------~P~- 111 (259)
|+.++|. +.|++++...|.++.+|+..+......|+.. +|.+.|++++.. .|.
T Consensus 357 ~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e--------------~aR~iyek~l~~l~~~~~~~~~~~p~~ 422 (679)
T 4e6h_A 357 NTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIP--------------EIETTILSCIDRIHLDLAALMEDDPTN 422 (679)
T ss_dssp SCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred CcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHH--------------HHHHHHHHHHHHHHHHhhhhhhccCcc
Confidence 7778997 9999999999999999999999888888754 566666666653 243
Q ss_pred ----------ChHHHHHHHHHHHHhhchhhHHHH-------------------------H-hcHHHHHHHHHHHHccCCC
Q psy9159 112 ----------NSNTQKWYGICVGANGQFQSLKEK-------------------------I-KCGVVFRDQMNKAIQMAPK 155 (259)
Q Consensus 112 ----------~~~~~~~la~~~~~~~~~~~~~~~-------------------------~-~~~~~a~~~~~kAl~l~P~ 155 (259)
.+.+|..++.+..+.++...+..- . .+...+...|+++|+..|+
T Consensus 423 ~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~ 502 (679)
T 4e6h_A 423 ESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFAT 502 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC
Confidence 233444444444444433211000 0 0012445566666666666
Q ss_pred ChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCC--CcHHhHHHHHHHHHHhCCHHHHHH
Q psy9159 156 DFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPA--PWKENQLLIAKCYIEAGEYAKAVQ 233 (259)
Q Consensus 156 ~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~--~~~~~~~~la~~~~~~g~~~eA~~ 233 (259)
++..|...+.+.... |+.+.|...|++|+...|+ .....|......-...|+.+.+.+
T Consensus 503 ~~~~w~~y~~fe~~~--------------------~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~ 562 (679)
T 4e6h_A 503 DGEYINKYLDFLIYV--------------------NEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRT 562 (679)
T ss_dssp CHHHHHHHHHHHHHH--------------------TCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred chHHHHHHHHHHHhC--------------------CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 666665555543332 7899999999999999872 234567778888888999999999
Q ss_pred HHHHHhcCCCCCccchhhhhhhcc
Q psy9159 234 WLDKAKAIPVVSYESHDLSTTYSY 257 (259)
Q Consensus 234 ~~~kal~l~p~~~~~~~~~~~~~~ 257 (259)
.++++.+..|+++.-+.....|++
T Consensus 563 v~~R~~~~~P~~~~~~~f~~ry~~ 586 (679)
T 4e6h_A 563 LEKRFFEKFPEVNKLEEFTNKYKV 586 (679)
T ss_dssp HHHHHHHHSTTCCHHHHHHHHTCB
T ss_pred HHHHHHHhCCCCcHHHHHHHHhcC
Confidence 999999999998766655555544
No 207
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.77 E-value=7.3e-08 Score=87.55 Aligned_cols=131 Identities=13% Similarity=0.088 Sum_probs=97.7
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhc-----CCCCH---HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHH
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNK-----QPNDP---DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKK 104 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~-----~p~~~---~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~k 104 (259)
+.+..+. .+ |+|++|+.+++++++. .|++| .++.+||.+|..+|++. +|+.++++
T Consensus 314 e~a~~~~--~q-g~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~--------------eA~~~~~~ 376 (490)
T 3n71_A 314 EKIDKAR--SE-GLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYE--------------EASHYARR 376 (490)
T ss_dssp HHHHHHH--TT-TCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHH
T ss_pred HHHHHHH--hC-CCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHH--------------HHHHHHHH
Confidence 3444454 56 9999999999999873 45555 45677888888888765 88888877
Q ss_pred HHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh---hHHHHHHHHHHHhhccchHHHHHH
Q psy9159 105 AMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF---TLYSLKGRYQYEISKLSFFERKIA 181 (259)
Q Consensus 105 al~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~---~~~~~lG~~~~~~~~~~~~~~~~~ 181 (259)
+|++.. + .+.|+|+ ..+++||.+|...
T Consensus 377 aL~i~~-------------------------------------~--~lG~~Hp~~a~~l~nLa~~~~~~----------- 406 (490)
T 3n71_A 377 MVDGYM-------------------------------------K--LYHHNNAQLGMAVMRAGLTNWHA----------- 406 (490)
T ss_dssp HHHHHH-------------------------------------H--HSCTTCHHHHHHHHHHHHHHHHT-----------
T ss_pred HHHHHH-------------------------------------H--HcCCCCHHHHHHHHHHHHHHHHC-----------
Confidence 765421 1 1334444 5578888888774
Q ss_pred HHHhcCCCCCcHHHHHHHHHHHHhh-----CCCCcH---HhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 182 VLIVSDLDEPTAEDAIANCLKAEEL-----APAPWK---ENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 182 ~~~~~~~~~g~~~eAi~~~~kAi~l-----~P~~~~---~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
|++++|+..|++|+++ .| +.+ .....|+.++..++++++|...|+++.+
T Consensus 407 ---------G~~~eA~~~~~~Al~i~~~~lG~-~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 407 ---------GHIEVGHGMICKAYAILLVTHGP-SHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHTCT-TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999985 46 333 4467899999999999999999999865
No 208
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.76 E-value=1.9e-08 Score=89.52 Aligned_cols=160 Identities=13% Similarity=0.048 Sum_probs=114.2
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA 109 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~ 109 (259)
....-++.++ .. |.|++|...|.++ +.|.++|.++..+|++. +|++.++++
T Consensus 124 a~~~IGd~~~--~~-g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq--------------~AVea~~KA---- 174 (449)
T 1b89_A 124 HIQQVGDRCY--DE-KMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQ--------------AAVDGARKA---- 174 (449)
T ss_dssp ----------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHH--------------HHHHHHHHH----
T ss_pred HHHHHHHHHH--Hc-CCHHHHHHHHHHh--------hhHHHHHHHHHHhccHH--------------HHHHHHHHc----
Confidence 3445566666 55 7888888888766 35677888888887765 899999998
Q ss_pred CCChHHHHHHHHHHHHhhchhhHH--------------------HHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH
Q psy9159 110 PNNSNTQKWYGICVGANGQFQSLK--------------------EKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE 169 (259)
Q Consensus 110 P~~~~~~~~la~~~~~~~~~~~~~--------------------~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~ 169 (259)
+++.+|.....++...|++..+. .+.+...++...+++++.++|.+...++.+|..|.+
T Consensus 175 -~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 175 -NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred -CCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 47788877777777777554332 223344577899999999999999999999988765
Q ss_pred hhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCC-----CCcHHhHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9159 170 ISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAP-----APWKENQLLIAKCYIEAGEYAKAVQWLDKA 238 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P-----~~~~~~~~~la~~~~~~g~~~eA~~~~~ka 238 (259)
-. .++..++++.|...+.+.| .+ ...|..+..+|...++++.|+..+-..
T Consensus 254 y~------------------p~k~~ehl~~~~~~ini~k~~~~~~~-~~~w~e~~~ly~~~~e~d~A~~tm~~h 308 (449)
T 1b89_A 254 FK------------------PQKMREHLELFWSRVNIPKVLRAAEQ-AHLWAELVFLYDKYEEYDNAIITMMNH 308 (449)
T ss_dssp TC------------------HHHHHHHHHHHSTTSCHHHHHHHHHT-TTCHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cC------------------HHHHHHHHHHHHHHhcCcHHHHHHHH-HHHHHHHHHHHHhhchHHHHHHHHHhC
Confidence 32 2678999999998888766 32 456999999999999999999876654
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.71 E-value=2.8e-08 Score=75.63 Aligned_cols=95 Identities=8% Similarity=0.017 Sum_probs=81.1
Q ss_pred HHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhC-CCCcHHhHHHHH
Q psy9159 141 VFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELA-PAPWKENQLLIA 219 (259)
Q Consensus 141 ~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~-P~~~~~~~~~la 219 (259)
.+.+.|.+.++.+|.+..+.+.+|.++..... .++++++|..++..++.+ |.+..+.+++||
T Consensus 16 ~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~-----------------~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LA 78 (152)
T 1pc2_A 16 KFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKY-----------------NDDIRKGIVLLEELLPKGSKEEQRDYVFYLA 78 (152)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSS-----------------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCcHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHhcCCccchHHHHHHHH
Confidence 45678888899999999999999988876432 146789999999999999 734578899999
Q ss_pred HHHHHhCCHHHHHHHHHHHhcCCCCCccchhhh
Q psy9159 220 KCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 220 ~~~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~ 252 (259)
..+.++|++++|+++++++++++|+|.....+.
T Consensus 79 v~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 79 VGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 999999999999999999999999987765554
No 210
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.69 E-value=2.4e-07 Score=70.42 Aligned_cols=96 Identities=9% Similarity=-0.003 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccC-C-CChhHHHHHHHHHHHh
Q psy9159 93 KYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMA-P-KDFTLYSLKGRYQYEI 170 (259)
Q Consensus 93 ~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~-P-~~~~~~~~lG~~~~~~ 170 (259)
+.+..+...|.+.++.+|.+.++.+.+|+++.+..+.... .+++..++..++.+ | ++.+++|.||..++++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~-------~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl 84 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDI-------RKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRL 84 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHH-------HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHH-------HHHHHHHHHHHhcCCccchHHHHHHHHHHHHHc
Confidence 3456788889999999999999999999999986643322 25678899999998 8 6789999999999885
Q ss_pred hccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHH
Q psy9159 171 SKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQL 216 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~ 216 (259)
|+|++|.++++++++++| ++..+..
T Consensus 85 --------------------~~Y~~A~~y~~~lL~ieP-~n~QA~~ 109 (152)
T 1pc2_A 85 --------------------KEYEKALKYVRGLLQTEP-QNNQAKE 109 (152)
T ss_dssp --------------------SCHHHHHHHHHHHHHHCT-TCHHHHH
T ss_pred --------------------cCHHHHHHHHHHHHhcCC-CCHHHHH
Confidence 889999999999999999 7776644
No 211
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.68 E-value=8.1e-08 Score=68.48 Aligned_cols=72 Identities=10% Similarity=-0.092 Sum_probs=61.4
Q ss_pred ChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCC------CCcHHhHHHHHHHHHHhCCHH
Q psy9159 156 DFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAP------APWKENQLLIAKCYIEAGEYA 229 (259)
Q Consensus 156 ~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P------~~~~~~~~~la~~~~~~g~~~ 229 (259)
++.-.+.+|..++.. |+|..|+.+|++|++..+ .....++..||.++.++|+++
T Consensus 4 sa~dc~~lG~~~~~~--------------------~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~ 63 (104)
T 2v5f_A 4 TAEDCFELGKVAYTE--------------------ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLD 63 (104)
T ss_dssp CHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHc--------------------cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHH
Confidence 455678899988875 889999999999999741 134678999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcc
Q psy9159 230 KAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 230 eA~~~~~kal~l~p~~~~ 247 (259)
+|+..++++++++|++..
T Consensus 64 ~A~~~~~~al~l~P~~~~ 81 (104)
T 2v5f_A 64 KALLLTKKLLELDPEHQR 81 (104)
T ss_dssp HHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHhcCCCCHH
Confidence 999999999999988753
No 212
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.60 E-value=1.1e-07 Score=83.75 Aligned_cols=162 Identities=11% Similarity=0.013 Sum_probs=109.8
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC------CCChHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA------PNNSNT 115 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~------P~~~~~ 115 (259)
.. |++++|++.+.+++...+...... ..+.+...+|......++ +++|+..+++++... +..+.+
T Consensus 67 ~~-~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~-------~~~a~~~~~~~~~~~~~~~~~~~~~~~ 137 (434)
T 4b4t_Q 67 TM-GAKDKLREFIPHSTEYMMQFAKSK-TVKVLKTLIEKFEQVPDS-------LDDQIFVCEKSIEFAKREKRVFLKHSL 137 (434)
T ss_dssp HH-TCHHHHHHHHHHTHHHHHTSCHHH-HHHHHHHHHHHHCSCCSC-------HHHHHHHHHHHHHHHHHSSCCSSHHHH
T ss_pred HC-CCHHHHHHHHHHHHHHHHHccchH-HHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHHHHhCccHHHHHH
Confidence 45 999999999999988655443321 112222223322211111 236677777766553 333567
Q ss_pred HHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHcc------CCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCC
Q psy9159 116 QKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQM------APKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLD 189 (259)
Q Consensus 116 ~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l------~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (259)
+..+|.++...|++..+ ...+++++.. .|....++..+|++|...
T Consensus 138 ~~~la~~~~~~g~~~~A----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 188 (434)
T 4b4t_Q 138 SIKLATLHYQKKQYKDS----------LALINDLLREFKKLDDKPSLVDVHLLESKVYHKL------------------- 188 (434)
T ss_dssp HHHHHHHHHHHTCHHHH----------HHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHHHccChHHH----------HHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh-------------------
Confidence 78899999999988744 4455555433 344557889999998875
Q ss_pred CCcHHHHHHHHHHHHhhCCC--Cc----HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 190 EPTAEDAIANCLKAEELAPA--PW----KENQLLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~--~~----~~~~~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
|++++|..++++++.+.|. +. ...+..+|..+...|++++|..+|.++++..
T Consensus 189 -~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~ 246 (434)
T 4b4t_Q 189 -RNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESY 246 (434)
T ss_dssp -TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred -CcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 8899999999999987421 11 2457788999999999999999999998754
No 213
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.42 E-value=3e-05 Score=70.39 Aligned_cols=155 Identities=7% Similarity=0.022 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q psy9159 47 KAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGAN 126 (259)
Q Consensus 47 ~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~ 126 (259)
.+.+...|++++...|.++.+|+..+..+...|+.. +|...+++|+.. |.+...|..++.... .
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~--------------~ar~i~erAi~~-P~~~~l~~~y~~~~e-~ 258 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKE--------------KAKKVVERGIEM-SDGMFLSLYYGLVMD-E 258 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHH-CCSSHHHHHHHHHTT-C
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHH--------------HHHHHHHHHHhC-CCcHHHHHHHHhhcc-h
Confidence 456778999999999999999999999888777654 999999999999 999877766554310 0
Q ss_pred hch-hh------------------------------HHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccch
Q psy9159 127 GQF-QS------------------------------LKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSF 175 (259)
Q Consensus 127 ~~~-~~------------------------------~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~ 175 (259)
.+. .. ...+......+...+++| +..+.....|...+.+.+..+
T Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~---- 333 (493)
T 2uy1_A 259 EAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYAT---- 333 (493)
T ss_dssp THHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHH----
T ss_pred hHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHC----
Confidence 000 00 000122234566778888 433334444544444333321
Q ss_pred HHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9159 176 FERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKA 238 (259)
Q Consensus 176 ~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~ka 238 (259)
++.+.|...|+++++..| +.+..+...+......|+.+.|...|+++
T Consensus 334 ---------------~d~~~ar~ife~al~~~~-~~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 334 ---------------GSRATPYNIFSSGLLKHP-DSTLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp ---------------CCSHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred ---------------CChHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 357778888888888777 55666666666677777777777777776
No 214
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.37 E-value=1.5e-06 Score=77.65 Aligned_cols=95 Identities=11% Similarity=-0.050 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHc-----cCCCChh---HHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh-----
Q psy9159 140 VVFRDQMNKAIQ-----MAPKDFT---LYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL----- 206 (259)
Q Consensus 140 ~~a~~~~~kAl~-----l~P~~~~---~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l----- 206 (259)
.+|...++++|+ +.|+|+. .+.+||.+|..+ |+|++|+.++++++++
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~--------------------g~~~eA~~~~~~aL~i~~~~l 374 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYM--------------------QDWEGALKYGQKIIKPYSKHY 374 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhh--------------------cCHHHHHHHHHHHHHHHHHHc
Confidence 467788888886 5788875 467788888764 8999999999999986
Q ss_pred CCC--CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhc-----CCCCCccchhhhhh
Q psy9159 207 APA--PWKENQLLIAKCYIEAGEYAKAVQWLDKAKA-----IPVVSYESHDLSTT 254 (259)
Q Consensus 207 ~P~--~~~~~~~~la~~~~~~g~~~eA~~~~~kal~-----l~p~~~~~~~~~~~ 254 (259)
.|+ +....+.+||.+|..+|++++|+..|++|++ +.|++|...++..|
T Consensus 375 G~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~ 429 (433)
T 3qww_A 375 PVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQE 429 (433)
T ss_dssp CSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 341 2234589999999999999999999999987 57888777766654
No 215
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.36 E-value=3.5e-06 Score=59.81 Aligned_cols=77 Identities=10% Similarity=0.086 Sum_probs=66.8
Q ss_pred CHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHHhhchhhHHHHH
Q psy9159 64 DPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA-------PNNSNTQKWYGICVGANGQFQSLKEKI 136 (259)
Q Consensus 64 ~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~-------P~~~~~~~~la~~~~~~~~~~~~~~~~ 136 (259)
+++-.+.+|..++..|++. .|+.++++|++.. +..+.++..+|.++..+|++.
T Consensus 4 sa~dc~~lG~~~~~~~~y~--------------~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~------ 63 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYY--------------HTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLD------ 63 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHH------
T ss_pred CHHHHHHHHHHHHHccchH--------------HHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHH------
Confidence 4566788999999999876 9999999999864 456788999999999999887
Q ss_pred hcHHHHHHHHHHHHccCCCChhHHHHHH
Q psy9159 137 KCGVVFRDQMNKAIQMAPKDFTLYSLKG 164 (259)
Q Consensus 137 ~~~~~a~~~~~kAl~l~P~~~~~~~~lG 164 (259)
.|...++++++++|++..+..+++
T Consensus 64 ----~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 64 ----KALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp ----HHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ----HHHHHHHHHHhcCCCCHHHHhhHH
Confidence 567899999999999999988887
No 216
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.30 E-value=4.3e-06 Score=75.84 Aligned_cols=95 Identities=13% Similarity=0.014 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHc-----cCCCChh---HHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh-----
Q psy9159 140 VVFRDQMNKAIQ-----MAPKDFT---LYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL----- 206 (259)
Q Consensus 140 ~~a~~~~~kAl~-----l~P~~~~---~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l----- 206 (259)
.+|...++++|+ +.|+|+. .+.+||.+|... |+|++|+.++++++++
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~--------------------g~~~eA~~~~~~aL~i~~~~l 385 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYL--------------------QAYEEASHYARRMVDGYMKLY 385 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh--------------------cCHHHHHHHHHHHHHHHHHHc
Confidence 356777788776 5677764 577888888764 8899999999999986
Q ss_pred CCC--CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhc-----CCCCCccchhhhhh
Q psy9159 207 APA--PWKENQLLIAKCYIEAGEYAKAVQWLDKAKA-----IPVVSYESHDLSTT 254 (259)
Q Consensus 207 ~P~--~~~~~~~~la~~~~~~g~~~eA~~~~~kal~-----l~p~~~~~~~~~~~ 254 (259)
.|+ +....+.+||.+|..+|++++|+..|++|++ +.|+.|....++.+
T Consensus 386 G~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~ 440 (490)
T 3n71_A 386 HHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAM 440 (490)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 342 2234589999999999999999999999987 57887776665543
No 217
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.19 E-value=0.00015 Score=65.76 Aligned_cols=192 Identities=13% Similarity=0.012 Sum_probs=119.6
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL 108 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~ 108 (259)
..++..+-..+ .. |+++.+..+|++++...| ++++|.....-....+... +.....|++|+..
T Consensus 15 R~vyer~l~~~--P~-~~~e~~~~iferal~~~p-s~~LW~~Y~~f~~~~~~~~-------------~~i~~~fe~al~~ 77 (493)
T 2uy1_A 15 SAIMEHARRLY--MS-KDYRSLESLFGRCLKKSY-NLDLWMLYIEYVRKVSQKK-------------FKLYEVYEFTLGQ 77 (493)
T ss_dssp HHHHHHHHHHH--HT-TCHHHHHHHHHHHSTTCC-CHHHHHHHHHHHHHHC-----------------CTHHHHHHHHHH
T ss_pred HHHHHHHHHHC--CC-CCHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHhCchH-------------HHHHHHHHHHHHH
Confidence 34567777788 67 999999999999999989 8898866655554443211 2445667777764
Q ss_pred ---CCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhH-HHHHHHHHHHhhc----------cc
Q psy9159 109 ---APNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTL-YSLKGRYQYEISK----------LS 174 (259)
Q Consensus 109 ---~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~-~~~lG~~~~~~~~----------~~ 174 (259)
+|.+...|..+...+..... .. +....+...|++||..-+.+..- |.....+-...+. .+
T Consensus 78 vg~d~~s~~iW~~Yi~f~~~~~~---~~---~~~~~vR~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~ 151 (493)
T 2uy1_A 78 FENYWDSYGLYKEYIEEEGKIED---EQ---TRIEKIRNGYMRALQTPMGSLSELWKDFENFELELNKITGKKIVGDTLP 151 (493)
T ss_dssp STTCTTCHHHHHHHHHHTSSCSS---HH---HHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cCCCcccHHHHHHHHHHHHhchh---hh---HHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHhccccHHHHHHHHhH
Confidence 78888877666554322110 01 12224678999999963333322 2111111100000 00
Q ss_pred hHH---------------------HHHHHHHhcCCCCCc-----HHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCH
Q psy9159 175 FFE---------------------RKIAVLIVSDLDEPT-----AEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEY 228 (259)
Q Consensus 175 ~~~---------------------~~~~~~~~~~~~~g~-----~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~ 228 (259)
.+. ........+ .+.|. .+.....|++++...| +.+..|+..+..+...|+.
T Consensus 152 ~y~~ar~~y~~~~~~~~~~s~~~W~~y~~~E~~-~~~~~~~~~~~~Rv~~~ye~al~~~p-~~~~lW~~ya~~~~~~~~~ 229 (493)
T 2uy1_A 152 IFQSSFQRYQQIQPLIRGWSVKNAARLIDLEME-NGMKLGGRPHESRMHFIHNYILDSFY-YAEEVYFFYSEYLIGIGQK 229 (493)
T ss_dssp HHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhc-CCccCcchhhHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHcCCH
Confidence 000 000001111 11111 4557789999999999 7899999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCc
Q psy9159 229 AKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 229 ~eA~~~~~kal~l~p~~~ 246 (259)
++|...|++|+.. |.+.
T Consensus 230 ~~ar~i~erAi~~-P~~~ 246 (493)
T 2uy1_A 230 EKAKKVVERGIEM-SDGM 246 (493)
T ss_dssp HHHHHHHHHHHHH-CCSS
T ss_pred HHHHHHHHHHHhC-CCcH
Confidence 9999999999999 7754
No 218
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.17 E-value=4.8e-06 Score=74.35 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHc-----cCCCChh---HHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh-----
Q psy9159 140 VVFRDQMNKAIQ-----MAPKDFT---LYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL----- 206 (259)
Q Consensus 140 ~~a~~~~~kAl~-----l~P~~~~---~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l----- 206 (259)
.++...++++++ +.|+|+. .+.++|.+|... |+|++|+.++++++++
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~--------------------g~~~eA~~~~~~~L~i~~~~l 363 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINL--------------------GLLEEALFYGTRTMEPYRIFF 363 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHH--------------------TCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhh--------------------ccHHHHHHHHHHHHHhHHHHc
Confidence 467788899986 4677764 567777777664 8899999999999986
Q ss_pred CCCCcH---HhHHHHHHHHHHhCCHHHHHHHHHHHhc-----CCCCCccchhhhhhh
Q psy9159 207 APAPWK---ENQLLIAKCYIEAGEYAKAVQWLDKAKA-----IPVVSYESHDLSTTY 255 (259)
Q Consensus 207 ~P~~~~---~~~~~la~~~~~~g~~~eA~~~~~kal~-----l~p~~~~~~~~~~~~ 255 (259)
.| +.+ ..+++||.+|..+|++++|+..+++|++ +.|++|....+.++.
T Consensus 364 g~-~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l 419 (429)
T 3qwp_A 364 PG-SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLL 419 (429)
T ss_dssp CS-SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHH
T ss_pred CC-CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 34 333 4589999999999999999999999987 578888777766553
No 219
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.04 E-value=0.00012 Score=53.73 Aligned_cols=98 Identities=10% Similarity=-0.003 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccC-C-CChhHHHHHHHHHH
Q psy9159 91 SEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMA-P-KDFTLYSLKGRYQY 168 (259)
Q Consensus 91 ~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~-P-~~~~~~~~lG~~~~ 168 (259)
....+......|.+.+..++.+..+.+.+|+++.+..+.... ...+..++..+.-+ | ..-..+|.||..++
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~-------~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y 85 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDI-------RKGIVLLEELLPKGSKEEQRDYVFYLAVGNY 85 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHH-------HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHH-------HHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Confidence 344566888889999999999999999999999876554432 24567888888877 6 56688999999888
Q ss_pred HhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHH
Q psy9159 169 EISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQL 216 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~ 216 (259)
++ |+|++|.++++..++++| +|.++..
T Consensus 86 kl--------------------g~Y~~A~~~~~~lL~~eP-~n~QA~~ 112 (126)
T 1nzn_A 86 RL--------------------KEYEKALKYVRGLLQTEP-QNNQAKE 112 (126)
T ss_dssp HT--------------------TCHHHHHHHHHHHHHHCT-TCHHHHH
T ss_pred Hh--------------------hhHHHHHHHHHHHHHhCC-CCHHHHH
Confidence 86 889999999999999999 7777643
No 220
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.98 E-value=2.5e-05 Score=69.73 Aligned_cols=94 Identities=11% Similarity=0.086 Sum_probs=70.3
Q ss_pred cCCHHHHHHHHHHHhh-----cCCCCHH---HHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHh-----CC
Q psy9159 44 KDDKAKAYNLTMELNN-----KQPNDPD---VLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMEL-----AP 110 (259)
Q Consensus 44 ~~~~~~A~~~~~~~~~-----~~p~~~~---~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~-----~P 110 (259)
.|+|++|+.+++++++ ..|++|. ++.+||.+|..+|++. +|+.+++++|++ .|
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~--------------eA~~~~~~aL~i~~~~lG~ 376 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWE--------------GALKYGQKIIKPYSKHYPV 376 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHHHHHHSCS
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHH--------------HHHHHHHHHHHHHHHHcCC
Confidence 3899999999999987 4566665 4678899999999876 777777777754 45
Q ss_pred CChHH---HHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHc-----cCCCChhHHH
Q psy9159 111 NNSNT---QKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQ-----MAPKDFTLYS 161 (259)
Q Consensus 111 ~~~~~---~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~-----l~P~~~~~~~ 161 (259)
+++.. +.++|.++...|++.. |...+++|++ +-|+|+.+--
T Consensus 377 ~Hp~~a~~l~nLa~~~~~qg~~~e----------A~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 377 YSLNVASMWLKLGRLYMGLENKAA----------GEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHH----------HHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred CChHHHHHHHHHHHHHHhccCHHH----------HHHHHHHHHHHHHHHcCCCChHHHH
Confidence 55554 6788999999998874 4556666654 5788876543
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.90 E-value=8.3e-05 Score=54.49 Aligned_cols=102 Identities=9% Similarity=-0.010 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC-C-CChHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA-P-NNSNTQKWYGIC 122 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~-P-~~~~~~~~la~~ 122 (259)
.....+...|.+....++.++++-|++|+++....+.. ...+|+..++..+..+ | ..-++++.+|..
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~-----------d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg 83 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYND-----------DIRKGIVLLEELLPKGSKEEQRDYVFYLAVG 83 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHH-----------HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHH-----------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 44556667777777778899999999999998765432 3458999999999887 5 677889999999
Q ss_pred HHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHH
Q psy9159 123 VGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQ 167 (259)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~ 167 (259)
+.++|+|. +|..+.+..|+++|+|..+......+-
T Consensus 84 ~yklg~Y~----------~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 84 NYRLKEYE----------KALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHTTCHH----------HHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHhhhHH----------HHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999998 567889999999999998887776544
No 222
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.83 E-value=0.00017 Score=54.30 Aligned_cols=121 Identities=17% Similarity=0.100 Sum_probs=83.9
Q ss_pred HhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCCh-hHHHHHHHHHHHhhccchHHHHHHHHHh
Q psy9159 107 ELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDF-TLYSLKGRYQYEISKLSFFERKIAVLIV 185 (259)
Q Consensus 107 ~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~-~~~~~lG~~~~~~~~~~~~~~~~~~~~~ 185 (259)
-+.|+|++.|..+...+...|+...- ..+. +..+.|++|+..-|-.. ..|-....+...-.. + . .
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~p~~d-~~l~---rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~--~--~----e-- 72 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSVPLSD-ALLN---KLIGRYSQAIEALPPDKYGQNESFARIQVRFAE--L--K----A-- 72 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTCSCCH-HHHH---HHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH--H--H----H--
T ss_pred eeCCCCHHHHHHHHHHHHHcCCCchh-hHHH---HHHHHHHHHHHcCCccccccHHHHHHHHHHHHH--H--H----H--
Confidence 46899999999999888888876321 1111 44688999998666532 222222221111000 0 0 0
Q ss_pred cCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 186 SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 186 ~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
.++.++|.+.|+.++++.. ..+.+|...|..-..+|+.+.|.+.+.+|+.+.|...
T Consensus 73 ----i~D~d~aR~vy~~a~~~hK-kFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~ 128 (161)
T 4h7y_A 73 ----IQEPDDARDYFQMARANCK-KFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL 128 (161)
T ss_dssp ----HHCGGGCHHHHHHHHHHCT-TBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH
T ss_pred ----hcCHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH
Confidence 1678999999999999977 5688999999999999999999999999999997644
No 223
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.75 E-value=0.0001 Score=65.70 Aligned_cols=106 Identities=14% Similarity=0.115 Sum_probs=76.5
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhc-----CCCCH---HHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHH
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNK-----QPNDP---DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEY 101 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~-----~p~~~---~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~ 101 (259)
+.+...+.+. .. |++++|+++++++++. .|+++ .++.++|.+|..+|++. +|+.+
T Consensus 289 ~ll~~ie~~~--~~-g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~--------------eA~~~ 351 (429)
T 3qwp_A 289 ESLKKIEELK--AH-WKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLE--------------EALFY 351 (429)
T ss_dssp HHHHHHHHHH--HT-TCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHH--------------HHHHH
T ss_pred HHHHHHHHHH--hh-ccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHH--------------HHHHH
Confidence 3455566666 56 9999999999999874 45665 56777899999999875 77777
Q ss_pred HHHHHHh-----CCCChHH---HHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHc-----cCCCChhHHHH
Q psy9159 102 AKKAMEL-----APNNSNT---QKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQ-----MAPKDFTLYSL 162 (259)
Q Consensus 102 ~~kal~~-----~P~~~~~---~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~-----l~P~~~~~~~~ 162 (259)
+++++++ .|++|.. +.++|.++...|++.. |...+++|++ +-|+|+.+-..
T Consensus 352 ~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~e----------A~~~~~~Al~i~~~~lG~~Hp~~~~~ 415 (429)
T 3qwp_A 352 GTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQ----------AMKNLRLAFDIMRVTHGREHSLIEDL 415 (429)
T ss_dssp HHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHH----------HHHHHHHHHHHHHHHTCTTSHHHHHH
T ss_pred HHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHH----------HHHHHHHHHHHHHHhcCCCChHHHHH
Confidence 7777744 3666654 6778999999998874 4455555544 68888866544
No 224
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.58 E-value=0.0025 Score=47.97 Aligned_cols=135 Identities=13% Similarity=-0.010 Sum_probs=89.8
Q ss_pred hcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHhhchhhHHHHHh
Q psy9159 59 NKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN-TQKWYGICVGANGQFQSLKEKIK 137 (259)
Q Consensus 59 ~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~-~~~~la~~~~~~~~~~~~~~~~~ 137 (259)
-..|+|++.|+......-..|+.. .. ..+++-++.|++|++.-|-... -|..|..+..+...+.+ +.
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~p~-------~d-~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~e----i~ 74 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSVPL-------SD-ALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELKA----IQ 74 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTCSC-------CH-HHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHHH----HH
T ss_pred eeCCCCHHHHHHHHHHHHHcCCCc-------hh-hHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHHH----hc
Confidence 357999999998888887777653 11 4556788999999988876432 23334444444433321 23
Q ss_pred cHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHH
Q psy9159 138 CGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLL 217 (259)
Q Consensus 138 ~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~ 217 (259)
+..++.+.|+.++++....+.+|...+.+-.+ +|+...|.+.+.+|+.+.| ... -.+.
T Consensus 75 D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiR--------------------qgnl~kARkILg~AiG~~~-k~~-~~le 132 (161)
T 4h7y_A 75 EPDDARDYFQMARANCKKFAFVHISFAQFELS--------------------QGNVKKSKQLLQKAVERGA-VPL-EMLE 132 (161)
T ss_dssp CGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHH--------------------TTCHHHHHHHHHHHHHTTC-BCH-HHHH
T ss_pred CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH--------------------cccHHHHHHHHHHHhccCC-CcH-HHHH
Confidence 34466789999998877777777777765544 3889999999999999999 433 3455
Q ss_pred HHHHHHHhCC
Q psy9159 218 IAKCYIEAGE 227 (259)
Q Consensus 218 la~~~~~~g~ 227 (259)
.|..-.+.|+
T Consensus 133 ~a~~nl~~~~ 142 (161)
T 4h7y_A 133 IALRNLNLQK 142 (161)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHhhhcCC
Confidence 5544444444
No 225
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.54 E-value=0.0069 Score=54.90 Aligned_cols=164 Identities=15% Similarity=0.039 Sum_probs=112.8
Q ss_pred HHHHhhcCCcCCHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC--CC
Q psy9159 35 IDRLLYYGKKDDKAKAYNLTMELNNKQ-PNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA--PN 111 (259)
Q Consensus 35 ~~~l~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~--P~ 111 (259)
.+.+- .. |+.++|+.+|+++.+.. +-+...|..+-.+|...+...+. ...+.+++|.+.+++..... |
T Consensus 33 id~c~--k~-G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~-----~~~~~l~~A~~lf~~M~~~G~~P- 103 (501)
T 4g26_A 33 LDMCS--KK-GDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATES-----SPNPGLSRGFDIFKQMIVDKVVP- 103 (501)
T ss_dssp HHHTT--TS-CCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSS-----SCCHHHHHHHHHHHHHHHTTCCC-
T ss_pred HHHHH--hC-CCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhh-----hhcchHHHHHHHHHHHHHhCCCC-
Confidence 34444 45 99999999999997753 23455666666666554432210 11234568888888877654 5
Q ss_pred ChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHc--cCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCC
Q psy9159 112 NSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQ--MAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLD 189 (259)
Q Consensus 112 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~--l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (259)
|...+..+-..+...|+... |.+.+++..+ +.|+.. .|..+-..|.+.
T Consensus 104 d~~tyn~lI~~~~~~g~~~~----------A~~l~~~M~~~g~~Pd~~-tyn~lI~~~~~~------------------- 153 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEM----------AFDMVKQMKAFGIQPRLR-SYGPALFGFCRK------------------- 153 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHH----------HHHHHHHHHHTTCCCCHH-HHHHHHHHHHHT-------------------
T ss_pred CHHHHHHHHHHHHhcCCHHH----------HHHHHHHHHHcCCCCccc-eehHHHHHHHHC-------------------
Confidence 55666777777788887763 4455555443 566654 444444445443
Q ss_pred CCcHHHHHHHHHHHHhh--CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 190 EPTAEDAIANCLKAEEL--APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l--~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
|+.++|.+.|++..+. .| +...|..|-.++.+.|+.++|.+.+++-.+
T Consensus 154 -g~~~~A~~l~~~M~~~G~~P--d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 154 -GDADKAYEVDAHMVESEVVP--EEPELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp -TCHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhcCCCC--CHHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 8899999999998875 46 467899999999999999999999998755
No 226
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.45 E-value=0.00093 Score=49.77 Aligned_cols=93 Identities=11% Similarity=-0.009 Sum_probs=71.8
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHH
Q psy9159 142 FRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKC 221 (259)
Q Consensus 142 a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~ 221 (259)
+.+-|.+-+. ++-.+.+-+.++.++..... ..+..++|..++..+..+|...-+..+.||..
T Consensus 25 lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~-----------------~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg 86 (144)
T 1y8m_A 25 LRQQVVSEGG-PTATIQSRFNYAWGLIKSTD-----------------VNDERLGVKILTDIYKEAESRRRECLYYLTIG 86 (144)
T ss_dssp HHHHHHHTTS-TTSCHHHHHHHHHHHHHSSS-----------------HHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHH
T ss_pred HHHHHHHhcc-CCCcHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHhcCccchhHHHHHHHHH
Confidence 3344444322 45677888899877766533 25578999999999999995555778999999
Q ss_pred HHHhCCHHHHHHHHHHHhcCCCCCccchhhh
Q psy9159 222 YIEAGEYAKAVQWLDKAKAIPVVSYESHDLS 252 (259)
Q Consensus 222 ~~~~g~~~eA~~~~~kal~l~p~~~~~~~~~ 252 (259)
+.++|+|++|.++.+..++++|+|.....+.
T Consensus 87 ~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 87 CYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp HHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 9999999999999999999999987655443
No 227
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.40 E-value=0.00088 Score=49.28 Aligned_cols=80 Identities=10% Similarity=-0.029 Sum_probs=65.2
Q ss_pred ChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHH
Q psy9159 156 DFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWL 235 (259)
Q Consensus 156 ~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~ 235 (259)
.+.+-+.++..+..... ..+..++|..++..+..+|...-+.++.||..+.++|+|++|.++.
T Consensus 39 s~qt~F~yAw~Lv~S~~-----------------~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~ 101 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTD-----------------VNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYV 101 (134)
T ss_dssp CHHHHHHHHHHHHHSSC-----------------HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 55778888877666533 2467899999999999998444577999999999999999999999
Q ss_pred HHHhcCCCCCccchhhh
Q psy9159 236 DKAKAIPVVSYESHDLS 252 (259)
Q Consensus 236 ~kal~l~p~~~~~~~~~ 252 (259)
+.++++.|+|.....+.
T Consensus 102 d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 102 DTLFEHERNNKQVGALK 118 (134)
T ss_dssp HHHHTTCTTCHHHHHHH
T ss_pred HHHHhhCCCCHHHHHHH
Confidence 99999999987655443
No 228
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.29 E-value=0.004 Score=45.76 Aligned_cols=101 Identities=8% Similarity=0.022 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP-NNSNTQKWYGICV 123 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P-~~~~~~~~la~~~ 123 (259)
.+.....+.|.+-. ...-++++-|++|+++....+.. ...+|+..++..+..+| ..-++++.+|..+
T Consensus 21 eeL~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~-----------d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~ 88 (134)
T 3o48_A 21 QQLEILRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVN-----------DERLGVKILTDIYKEAESRRRECLYYLTIGC 88 (134)
T ss_dssp HHHHHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHH-----------HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHH-----------HHHHHHHHHHHHHhcCcchhHHHHHHHHHHH
Confidence 44445555555543 33446789999999988765432 35689999999999998 4578889999999
Q ss_pred HHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHH
Q psy9159 124 GANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQ 167 (259)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~ 167 (259)
.++|++. .|.++.+..|+++|+|..+......+-
T Consensus 89 yklgdY~----------~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie 122 (134)
T 3o48_A 89 YKLGEYS----------MAKRYVDTLFEHERNNKQVGALKSMVE 122 (134)
T ss_dssp HHHTCHH----------HHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHhhhHH----------HHHHHHHHHHhhCCCCHHHHHHHHHHH
Confidence 9999988 567888999999999998887776654
No 229
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.23 E-value=0.0069 Score=45.06 Aligned_cols=101 Identities=8% Similarity=0.027 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP-NNSNTQKWYGICV 123 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P-~~~~~~~~la~~~ 123 (259)
.+.+...+.|.+-.. ++-++++-|++|+++....+.. ...+|+..++..+..+| ..-++++.+|..+
T Consensus 20 eeL~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~~~-----------di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ 87 (144)
T 1y8m_A 20 QQLEILRQQVVSEGG-PTATIQSRFNYAWGLIKSTDVN-----------DERLGVKILTDIYKEAESRRRECLYYLTIGC 87 (144)
T ss_dssp HHHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHSSSHH-----------HHHHHHHHHHHHHHHCCSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHcCCCHH-----------HHHHHHHHHHHHHhcCccchhHHHHHHHHHH
Confidence 444455555554422 3678899999999998766532 35699999999999998 5677889999999
Q ss_pred HHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHH
Q psy9159 124 GANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQ 167 (259)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~ 167 (259)
.++++|. +|.++.+..|+++|+|..+......+-
T Consensus 88 ykl~~Y~----------~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 88 YKLGEYS----------MAKRYVDTLFEHERNNKQVGALKSMVE 121 (144)
T ss_dssp HTTTCHH----------HHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHhhhHH----------HHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 9999998 567888999999999998887776554
No 230
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.0032 Score=59.68 Aligned_cols=48 Identities=27% Similarity=0.247 Sum_probs=45.0
Q ss_pred CCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9159 190 EPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKA 238 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~ka 238 (259)
.|+|+-|+.+.++|+.+.| .....|..|+.||+.+|+++.|+-.++-+
T Consensus 350 K~~~elAL~~Ak~AV~~aP-seF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 350 RGDYELALGVSNTSTELAL-DSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp TTCHHHHHHHHHHHHHHCS-SCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cCcHHHHHHHHHHHHhcCc-hhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4899999999999999999 77899999999999999999999888776
No 231
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.71 E-value=0.0067 Score=46.37 Aligned_cols=110 Identities=11% Similarity=0.077 Sum_probs=74.4
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHH---------HHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHH
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPD---------VLYRLAKACHCLYDIKRRENDKEASEKYILQGIE 100 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~---------~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~ 100 (259)
.++.++..++ .. |.|+.|+-+...++....++++ +++.+|.+++..+++. +|..
T Consensus 22 ~l~dqik~L~--d~-~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyr--------------rA~~ 84 (167)
T 3ffl_A 22 NVIDHVRDMA--AA-GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYR--------------NAVS 84 (167)
T ss_dssp CHHHHHHHHH--HT-TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHH--------------HHHH
T ss_pred HHHHHHHHHH--Hh-hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHH--------------HHHH
Confidence 4578888888 77 9999999998887665544444 7788999999988876 6666
Q ss_pred HHHHHHHhC-------------------------CCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCC
Q psy9159 101 YAKKAMELA-------------------------PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPK 155 (259)
Q Consensus 101 ~~~kal~~~-------------------------P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~ 155 (259)
.|++||.+. +.+.+..+.++.|+..++++..+ +..++. |-..--
T Consensus 85 ~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A----------i~~Le~-Ip~k~R 153 (167)
T 3ffl_A 85 KYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA----------IAILDG-IPSRQR 153 (167)
T ss_dssp HHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH----------HHHHHT-SCGGGC
T ss_pred HHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH----------HHHHhc-CCchhc
Confidence 666654322 11226778899999888887633 333322 222223
Q ss_pred ChhHHHHHHHHH
Q psy9159 156 DFTLYSLKGRYQ 167 (259)
Q Consensus 156 ~~~~~~~lG~~~ 167 (259)
.+.+...||+.|
T Consensus 154 t~kvnm~LakLy 165 (167)
T 3ffl_A 154 TPKINMLLANLY 165 (167)
T ss_dssp CHHHHHHHHHHC
T ss_pred CHHHHHHHHHHh
Confidence 567777787765
No 232
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.46 E-value=0.016 Score=44.24 Aligned_cols=60 Identities=17% Similarity=0.168 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhC---CCC---------------------cHHh
Q psy9159 159 LYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELA---PAP---------------------WKEN 214 (259)
Q Consensus 159 ~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~---P~~---------------------~~~~ 214 (259)
+++.+|..++.. +.|..|...|++|+++. |+. ..+.
T Consensus 65 ~l~~ladalf~~--------------------~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~El 124 (167)
T 3ffl_A 65 LLVYHADSLFHD--------------------KEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEV 124 (167)
T ss_dssp HHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHH
T ss_pred HHHHHHHHHHcc--------------------cHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHH
Confidence 667778777763 78999999999987642 101 0257
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHH
Q psy9159 215 QLLIAKCYIEAGEYAKAVQWLDKA 238 (259)
Q Consensus 215 ~~~la~~~~~~g~~~eA~~~~~ka 238 (259)
.+.+|.||.++|++++|+..++..
T Consensus 125 kykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 125 KYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCCHHHHHHHHhcC
Confidence 788999999999999999998753
No 233
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.81 E-value=0.33 Score=43.79 Aligned_cols=141 Identities=11% Similarity=0.019 Sum_probs=88.7
Q ss_pred CCHHH-HHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHhhchhhHHHHHhcH
Q psy9159 63 NDPDV-LYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA--PNNSNTQKWYGICVGANGQFQSLKEKIKCG 139 (259)
Q Consensus 63 ~~~~~-~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~--P~~~~~~~~la~~~~~~~~~~~~~~~~~~~ 139 (259)
..|+. +..+-..|.+.|+.. +|++.+++..+.. |+ ...|..+-.++...+...... .....
T Consensus 23 ~spe~~l~~~id~c~k~G~~~--------------~A~~lf~~M~~~Gv~pd-~~tyn~Li~~c~~~~~~~~~~-~~~~l 86 (501)
T 4g26_A 23 QSPEALLKQKLDMCSKKGDVL--------------EALRLYDEARRNGVQLS-QYHYNVLLYVCSLAEAATESS-PNPGL 86 (501)
T ss_dssp -CHHHHHHHHHHHTTTSCCHH--------------HHHHHHHHHHHHTCCCC-HHHHHHHHHHHTTCCCCSSSS-CCHHH
T ss_pred CCCHHHHHHHHHHHHhCCCHH--------------HHHHHHHHHHHcCCCCC-HhHHHHHHHHHHhCCchhhhh-hcchH
Confidence 34554 334445666667654 8999998887754 53 444444433444333221100 00111
Q ss_pred HHHHHHHHHHHc--cCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh--CCCCcHHhH
Q psy9159 140 VVFRDQMNKAIQ--MAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL--APAPWKENQ 215 (259)
Q Consensus 140 ~~a~~~~~kAl~--l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l--~P~~~~~~~ 215 (259)
..+.+.+++..+ +.|+. .+|..+-..|.+. |+.++|++.|++..+. .| +...|
T Consensus 87 ~~A~~lf~~M~~~G~~Pd~-~tyn~lI~~~~~~--------------------g~~~~A~~l~~~M~~~g~~P--d~~ty 143 (501)
T 4g26_A 87 SRGFDIFKQMIVDKVVPNE-ATFTNGARLAVAK--------------------DDPEMAFDMVKQMKAFGIQP--RLRSY 143 (501)
T ss_dssp HHHHHHHHHHHHTTCCCCH-HHHHHHHHHHHHH--------------------TCHHHHHHHHHHHHHTTCCC--CHHHH
T ss_pred HHHHHHHHHHHHhCCCCCH-HHHHHHHHHHHhc--------------------CCHHHHHHHHHHHHHcCCCC--cccee
Confidence 234555655443 45654 4555555556654 8899999999998875 56 47789
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 216 LLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 216 ~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
..+-..|...|+.++|.+.+++..+..
T Consensus 144 n~lI~~~~~~g~~~~A~~l~~~M~~~G 170 (501)
T 4g26_A 144 GPALFGFCRKGDADKAYEVDAHMVESE 170 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999987643
No 234
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.57 E-value=0.59 Score=38.51 Aligned_cols=66 Identities=15% Similarity=0.153 Sum_probs=58.9
Q ss_pred HHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh
Q psy9159 34 EIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS 113 (259)
Q Consensus 34 ~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~ 113 (259)
.+..++ .. |+.++|++.+...++.+|.|++....+-..++-.|++. +|...++-+.+++|+..
T Consensus 3 ~~~~ll--~~-g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~--------------RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 3 QWKNAL--SE-GQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFE--------------RADEQLMQSIKLFPEYL 65 (273)
T ss_dssp CHHHHT--TT-TCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHH--------------HHHHHHHHHHHHCGGGH
T ss_pred cHHHHH--hC-CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHH--------------HHHHHHHHHHHhCchhh
Confidence 355677 67 99999999999999999999999999999999999875 99999999999999876
Q ss_pred HHH
Q psy9159 114 NTQ 116 (259)
Q Consensus 114 ~~~ 116 (259)
..-
T Consensus 66 ~~a 68 (273)
T 1zbp_A 66 PGA 68 (273)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 235
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.51 E-value=0.9 Score=43.09 Aligned_cols=132 Identities=8% Similarity=0.055 Sum_probs=72.8
Q ss_pred chhHHHHHhhcCCcCC-HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH--hhchhcccCcHHHHHHHHHHHHHHHHHHHH
Q psy9159 31 KYPEIDRLLYYGKKDD-KAKAYNLTMELNNKQPNDPDVLYRLAKACHC--LYDIKRRENDKEASEKYILQGIEYAKKAME 107 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~-~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~--~g~~~~~~~~~~~~~~~~~~A~~~~~kal~ 107 (259)
+....-.++. -+ ++ ++.|++++++..+.+|... +++..+.+... .++ ...+....+.+++..+...+.
T Consensus 250 L~~~Ll~~~~-~t-~~~~~~a~~~le~L~~~~p~~~-~~~~~~~i~~~~~~~~------~Ev~av~ll~~~l~~~~~~~~ 320 (754)
T 4gns_B 250 LMYSLKSFIA-IT-PSLVDFTIDYLKGLTKKDPIHD-IYYKTAMITILDHIET------KELDMITILNETLDPLLSLLN 320 (754)
T ss_dssp HHHHHHHHHH-TC-GGGHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHTTCGG------GHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-cc-ccHHHHHHHHHHHHHhhCCchh-HHHHHHHHHHHHHhhh------hhHHHHHHHHHHHHHhhhhhh
Confidence 3444556663 34 56 6889999999999999764 33333332221 111 111233334444433333332
Q ss_pred h-CCCChHHHHHH---HHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccc
Q psy9159 108 L-APNNSNTQKWY---GICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174 (259)
Q Consensus 108 ~-~P~~~~~~~~l---a~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~ 174 (259)
. .+.+....... +.++..+.+|-- ..+..+.|....++|+.+-|.....|+.|+.+|..+++++
T Consensus 321 ~l~~~~~~~~~~~~~~~~LL~~Qa~FLl---~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e 388 (754)
T 4gns_B 321 DLPPRDADSARLMNCMSDLLNIQTNFLL---NRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYE 388 (754)
T ss_dssp TCSSCCHHHHHHHHHHHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHH
T ss_pred hhcccccccccccCcchHHHHHHHHHHh---ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHH
Confidence 2 34443322111 112222222211 1122336788999999999999999999999999986543
No 236
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.28 E-value=0.71 Score=35.51 Aligned_cols=106 Identities=11% Similarity=0.060 Sum_probs=71.1
Q ss_pred hCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcC
Q psy9159 108 LAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSD 187 (259)
Q Consensus 108 ~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~ 187 (259)
+-|.+++.-..+++++...|++.. .+--...+ +-..+.+-...+|...
T Consensus 28 L~~~~~eY~lL~~I~LyyngEY~R-------------~Lf~L~~l--NT~Ts~YYk~LCy~kl----------------- 75 (242)
T 3kae_A 28 LLPCKPEYRMLMSIVLYLNGEYTR-------------ALFHLHKL--NTCTSKYYESLCYKKK----------------- 75 (242)
T ss_dssp HC----CTHHHHHHHHHHTTCHHH-------------HHHHHHTC--CBHHHHHHHHHHHHHT-----------------
T ss_pred HccCChHHHhhhhhhhhhcchHhH-------------HHHHHHhc--chHHHHHHHHHHHHHH-----------------
Confidence 445666666788888888887762 22222233 3445555556666654
Q ss_pred CCCCcHHHHHHHHHHHHh--h---------------CCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCccc
Q psy9159 188 LDEPTAEDAIANCLKAEE--L---------------APAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYES 248 (259)
Q Consensus 188 ~~~g~~~eAi~~~~kAi~--l---------------~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~~ 248 (259)
.+|..|+.++++.++ + +|.+---.+..+|..+...|+.+||+.++.......|-.+.-
T Consensus 76 ---KdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 76 ---KDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp ---TCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred ---HHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 779999999999993 2 242222236779999999999999999999999888875543
No 237
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.21 E-value=0.27 Score=44.32 Aligned_cols=65 Identities=14% Similarity=0.053 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHH
Q psy9159 95 ILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE 169 (259)
Q Consensus 95 ~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~ 169 (259)
+..|..+|.+|+.+.|++...|..+|.+....++.- .+.-+|-|++....-.+.+..+|...+-.
T Consensus 168 ~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l----------~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 168 TSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHL----------TTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHH----------HHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccH----------HHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 469999999999999999999999999998877654 34567778877776677777777766543
No 238
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.19 E-value=0.39 Score=43.33 Aligned_cols=65 Identities=12% Similarity=0.056 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHH
Q psy9159 140 VVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIA 219 (259)
Q Consensus 140 ~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la 219 (259)
..|..+|.+|+.++|++...|+.||.+.... |+.-+|+-+|.+++.... ..+.+..+|.
T Consensus 169 ~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~--------------------~~~l~a~y~y~rsl~~~~-Pf~~a~~nL~ 227 (497)
T 1ya0_A 169 SQAESYYRHAAQLVPSNGQPYNQLAILASSK--------------------GDHLTTIFYYCRSIAVKF-PFPAASTNLQ 227 (497)
T ss_dssp HHHHHHHHHHHHHCTTBSHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHSSSB-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHhcc--------------------cccHHHHHHHHHHHhcCC-CChhHHHHHH
Confidence 3678999999999999999999999877653 677888888888888765 4577777777
Q ss_pred HHHHHh
Q psy9159 220 KCYIEA 225 (259)
Q Consensus 220 ~~~~~~ 225 (259)
..+...
T Consensus 228 ~~f~~~ 233 (497)
T 1ya0_A 228 KALSKA 233 (497)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=91.44 E-value=0.45 Score=39.22 Aligned_cols=56 Identities=13% Similarity=0.066 Sum_probs=52.0
Q ss_pred CCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 190 EPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
.|+.++|+......|+-+| .+......|...++-.|+++.|.+-++-+.+++|...
T Consensus 10 ~g~L~~al~~~~~~VR~~P-~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 10 EGQLQQALELLIEAIKASP-KDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp TTCHHHHHHHHHHHHHTCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred CCCHHHHHHHHHHHHHhCC-cCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 4899999999999999999 7799999999999999999999999999999997643
No 240
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.00 E-value=4.4 Score=37.77 Aligned_cols=42 Identities=19% Similarity=0.118 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKA 105 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ka 105 (259)
|++++|++..+. .+++..|-.+|..+...+++. .|+..|.++
T Consensus 666 ~~~~~A~~~~~~-----~~~~~~W~~la~~al~~~~~~--------------~A~~~y~~~ 707 (814)
T 3mkq_A 666 GQLTLARDLLTD-----ESAEMKWRALGDASLQRFNFK--------------LAIEAFTNA 707 (814)
T ss_dssp TCHHHHHHHHTT-----CCCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHH
T ss_pred CCHHHHHHHHHh-----hCcHhHHHHHHHHHHHcCCHH--------------HHHHHHHHc
Confidence 677777766543 467899999999999999875 888888776
No 241
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=90.43 E-value=1.1 Score=38.95 Aligned_cols=50 Identities=14% Similarity=0.007 Sum_probs=45.7
Q ss_pred CCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 190 EPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
.|++++|+..+.+++..+| ..-..|..|-.+|...|+..+|++.|+++.+
T Consensus 184 ~g~~~~a~~~l~~~~~~~P-~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 184 CGRASAVIAELEALTFEHP-YREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp TTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4899999999999999999 7778899999999999999999999988744
No 242
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.29 E-value=8.3 Score=29.49 Aligned_cols=42 Identities=19% Similarity=0.105 Sum_probs=33.8
Q ss_pred hHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchh
Q psy9159 33 PEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIK 82 (259)
Q Consensus 33 ~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~ 82 (259)
.+-+..+ .. |+++.|.+..++. ++...|-+||......|++.
T Consensus 10 ~rF~LAL--~l-g~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~ 51 (177)
T 3mkq_B 10 IRFDLAL--EY-GNLDAALDEAKKL-----NDSITWERLIQEALAQGNAS 51 (177)
T ss_dssp HHHHHHH--HT-TCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHH--hc-CCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChH
Confidence 3444555 45 9999999998876 67899999999999999865
No 243
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.24 E-value=1.5 Score=39.59 Aligned_cols=119 Identities=12% Similarity=-0.032 Sum_probs=58.2
Q ss_pred HhCCCChHHHHHHHHHHHHhhchhhHHHH---HhcH-HHHHHHHHHH-HccCCC-ChhHHHHHHHHHHHhhccchHHHHH
Q psy9159 107 ELAPNNSNTQKWYGICVGANGQFQSLKEK---IKCG-VVFRDQMNKA-IQMAPK-DFTLYSLKGRYQYEISKLSFFERKI 180 (259)
Q Consensus 107 ~~~P~~~~~~~~la~~~~~~~~~~~~~~~---~~~~-~~a~~~~~kA-l~l~P~-~~~~~~~lG~~~~~~~~~~~~~~~~ 180 (259)
.+|+=++.+|+.++.++...|........ .... ......++.| +..|+. .+..+..+=+.|...
T Consensus 175 tlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~~~qa~l~nllLRnYL~~---------- 244 (523)
T 4b4t_S 175 SLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNETKAMLINLILRDFLNN---------- 244 (523)
T ss_dssp ----------------------------CHHHHHHHHTHHHHHHHHCCSCSSSCHHHHHHHHHHHHHHHS----------
T ss_pred hHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccCcchhHHHHHHHHHHHHcc----------
Confidence 34666777787777777666654321100 0000 0112333333 345554 334556666666653
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHHHhhCCCC---c---HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 181 AVLIVSDLDEPTAEDAIANCLKAEELAPAP---W---KENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 181 ~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~---~---~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
+.|+.|.....|+. .|.. + ...++++|.++..+++|.+|.+++..|+..-|.+..
T Consensus 245 ----------~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~ 305 (523)
T 4b4t_S 245 ----------GEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSK 305 (523)
T ss_dssp ----------SCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSS
T ss_pred ----------CcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchh
Confidence 67899999999885 3411 1 344778999999999999999999999998876543
No 244
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.07 E-value=15 Score=34.01 Aligned_cols=35 Identities=6% Similarity=-0.117 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHH
Q psy9159 94 YILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLK 133 (259)
Q Consensus 94 ~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~ 133 (259)
++++|.+.+ ...+++..|..+|......++++.+.
T Consensus 667 ~~~~A~~~~-----~~~~~~~~W~~la~~al~~~~~~~A~ 701 (814)
T 3mkq_A 667 QLTLARDLL-----TDESAEMKWRALGDASLQRFNFKLAI 701 (814)
T ss_dssp CHHHHHHHH-----TTCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHH-----HhhCcHhHHHHHHHHHHHcCCHHHHH
Confidence 345666654 34578889999999999998887544
No 245
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=85.15 E-value=3.2 Score=35.93 Aligned_cols=62 Identities=8% Similarity=-0.043 Sum_probs=50.1
Q ss_pred CCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCC
Q psy9159 42 GKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPN 111 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~ 111 (259)
.. |++.+|+..+..++..+|-+-.++..+-.++...|+.. +.+..|......+.+-+.++|.
T Consensus 183 ~~-g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~-------~Al~~y~~~r~~L~~eLG~~P~ 244 (388)
T 2ff4_A 183 AC-GRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQS-------DALGAYRRVKTTLADDLGIDPG 244 (388)
T ss_dssp HT-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHH-------HHHHHHHHHHHHHHHHHSCCCC
T ss_pred HC-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-------HHHHHHHHHHHHHHHHhCCCCC
Confidence 45 99999999999999999999999999999999999875 4455555555555555667775
No 246
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.69 E-value=3.8 Score=35.93 Aligned_cols=67 Identities=15% Similarity=0.066 Sum_probs=41.1
Q ss_pred CChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhC--CCCcHHhHHHHHHHHHHhCCHHHHH
Q psy9159 155 KDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELA--PAPWKENQLLIAKCYIEAGEYAKAV 232 (259)
Q Consensus 155 ~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~--P~~~~~~~~~la~~~~~~g~~~eA~ 232 (259)
.-..++..+|.++++. |++++|.++|.++.... +.+-...++.+-.++...+++..+.
T Consensus 129 e~~~~~~~la~~~~~~--------------------Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~ 188 (429)
T 4b4t_R 129 EQAQAWINLGEYYAQI--------------------GDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVK 188 (429)
T ss_dssp CCSSCCHHHHHHHHHH--------------------CCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3456889999999887 45566666666655532 2233445555556666666666666
Q ss_pred HHHHHHhcC
Q psy9159 233 QWLDKAKAI 241 (259)
Q Consensus 233 ~~~~kal~l 241 (259)
..++|+..+
T Consensus 189 ~~~~ka~~~ 197 (429)
T 4b4t_R 189 EKLEAVNSM 197 (429)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666666443
No 247
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.69 E-value=7.8 Score=33.91 Aligned_cols=119 Identities=10% Similarity=0.067 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCC---hhHHHHHHHHHH
Q psy9159 92 EKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKD---FTLYSLKGRYQY 168 (259)
Q Consensus 92 ~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~---~~~~~~lG~~~~ 168 (259)
...+++.+..+++-...+..-..++.-+|..+...|++.++ .+.+.++.....+. ...+..+-+++.
T Consensus 110 l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~~Gd~~~A----------~~~~~~~~~~~~~~~~kid~~l~~irl~l 179 (429)
T 4b4t_R 110 IKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNA----------EKTLGKSLSKAISTGAKIDVMLTIARLGF 179 (429)
T ss_dssp HHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHHHCCCTTH----------HHHHHHHHHHHTCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHcCCHHHH----------HHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 44555555555443333455566788899999999999864 34555544432222 234444444454
Q ss_pred HhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh---CCCCcH---HhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 169 EISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL---APAPWK---ENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l---~P~~~~---~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
.. +++..+..++.++-.+ .+ ++. .....-|..+...++|.+|-+.|-.++..
T Consensus 180 ~~--------------------~d~~~~~~~~~ka~~~~~~~~-d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 180 FY--------------------NDQLYVKEKLEAVNSMIEKGG-DWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HH--------------------TCHHHHHHHHHHHHHHHTTCC-CTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred Hh--------------------ccHHHHHHHHHHHHHhhhcCC-CHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 43 6788888888888665 23 221 22445677777889999999999887654
No 248
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=76.99 E-value=12 Score=27.75 Aligned_cols=58 Identities=16% Similarity=0.165 Sum_probs=42.2
Q ss_pred HHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhC
Q psy9159 35 IDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELA 109 (259)
Q Consensus 35 ~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~ 109 (259)
.+.+. .. |+-++--+.+...+.-.|-+|++++.+|.+|...|+.. +|-+...+|-+..
T Consensus 98 Ld~lv--~~-~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r--------------~a~eLl~~AC~kG 155 (172)
T 1wy6_A 98 LDILV--IQ-GKRDKLEEIGREILKNNEVSASILVAIANALRRVGDER--------------DATTLLIEACKKG 155 (172)
T ss_dssp HHHHH--HT-TCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHHTT
T ss_pred HHHHH--Hh-ccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchh--------------hHHHHHHHHHHhh
Confidence 44455 44 77777777777777777788999999999999999865 6666666665543
No 249
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=76.51 E-value=38 Score=33.46 Aligned_cols=48 Identities=6% Similarity=0.050 Sum_probs=40.4
Q ss_pred CcHHHHHHHHHHHHhh--CCCCcHHhHHHHHHHHHHhCC-HHHHHHHHHHHhc
Q psy9159 191 PTAEDAIANCLKAEEL--APAPWKENQLLIAKCYIEAGE-YAKAVQWLDKAKA 240 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l--~P~~~~~~~~~la~~~~~~g~-~~eA~~~~~kal~ 240 (259)
|+.++|.+.|++..+. .| +...|..+-.++.+.|+ .++|.+.+++-.+
T Consensus 179 G~~~eA~~Lf~eM~~~G~~P--DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 179 GAFKELVYVLFMVKDAGLTP--DLLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp TCHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCC--cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 8899999999999875 47 47778889999999998 4788888887765
No 250
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.87 E-value=11 Score=37.57 Aligned_cols=47 Identities=19% Similarity=0.037 Sum_probs=35.1
Q ss_pred CcHHHHHHHHHHHHhhCCCCcHH----hHHHHHHHHHHhCCHHHHHHHHHH
Q psy9159 191 PTAEDAIANCLKAEELAPAPWKE----NQLLIAKCYIEAGEYAKAVQWLDK 237 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~~----~~~~la~~~~~~g~~~eA~~~~~k 237 (259)
|.++.++++.+.|++..+.+... .|..+-.....+|+|++|-..+..
T Consensus 913 ~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 913 SAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp SCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 67888999999999876423321 467778888899999998776643
No 251
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=73.13 E-value=58 Score=30.00 Aligned_cols=49 Identities=16% Similarity=0.008 Sum_probs=41.0
Q ss_pred CcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 191 PTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
|+++.|..+|.+.-.-.+ ......+.+|.++..+|+.++|..+|+++..
T Consensus 299 ~d~~~a~~~~~~l~~~~~-~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 299 GDRRGLNTWLARLPMEAK-EKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp TCHHHHHHHHHHSCTTGG-GSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcccccc-ccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 889999999987655333 3467789999999999999999999999875
No 252
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=72.54 E-value=29 Score=26.39 Aligned_cols=30 Identities=27% Similarity=0.070 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchh
Q psy9159 96 LQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQ 130 (259)
Q Consensus 96 ~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~ 130 (259)
+.|.+.+++. ++...|..+|......|++.
T Consensus 22 ~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~ 51 (177)
T 3mkq_B 22 DAALDEAKKL-----NDSITWERLIQEALAQGNAS 51 (177)
T ss_dssp HHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHh-----CCHHHHHHHHHHHHHcCChH
Confidence 4888877654 67888999999888888876
No 253
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.71 E-value=11 Score=36.67 Aligned_cols=78 Identities=17% Similarity=0.029 Sum_probs=58.2
Q ss_pred HHHHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh-------------------
Q psy9159 146 MNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL------------------- 206 (259)
Q Consensus 146 ~~kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l------------------- 206 (259)
..+.+..-|.++..-|.+|+++... |++++|..+|+||-.-
T Consensus 829 a~eL~~~~~~t~~~~yv~gr~~L~~--------------------ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~ 888 (950)
T 4gq2_M 829 CMQLIGWLNSDPIAVYLKALIYLKS--------------------KEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAE 888 (950)
T ss_dssp HHHHGGGCCSSHHHHHHHHHHHHHT--------------------TCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHH
T ss_pred HHHHHhhcCCChHHHHHHHHHHHHc--------------------CCHHHHHHHHHHHhhhcccCcccccchhhhhhccC
Confidence 3455677788887788899988876 7788888888776521
Q ss_pred --CCC-CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCC
Q psy9159 207 --APA-PWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPV 243 (259)
Q Consensus 207 --~P~-~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p 243 (259)
.++ .....|.+....+...+-++-+++..+.|++.-.
T Consensus 889 ~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~ 928 (950)
T 4gq2_M 889 KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 928 (950)
T ss_dssp HTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC
T ss_pred cccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcc
Confidence 110 1123578899999999999999999999998543
No 254
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=70.89 E-value=28 Score=25.75 Aligned_cols=51 Identities=12% Similarity=-0.082 Sum_probs=38.5
Q ss_pred CcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 191 PTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
|+-+.=-+.+...+..+| -+++..+-+|.+|.+.|+..+|.+.+++|.+-.
T Consensus 105 ~KkDqLdki~~~~l~n~~-~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 105 GKRDKLEEIGREILKNNE-VSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp TCHHHHHHHHHHHC--CC-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred ccHhHHHHHHHHHhccCC-CChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 555555555555445555 468889999999999999999999999998754
No 255
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=70.72 E-value=37 Score=27.09 Aligned_cols=32 Identities=6% Similarity=-0.069 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQP-NDPDVLYRLAKACH 76 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p-~~~~~~~~la~~~~ 76 (259)
++|++.+...+++.+.+| =+++=...++.+|-
T Consensus 19 eRyddm~~~mk~v~~~~~eLt~EERnLLsvayK 51 (234)
T 2br9_A 19 ERYDEMVESMKKVAGMDVELTVEERNLLSVAYK 51 (234)
T ss_dssp TCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH
Confidence 899999999999988654 44555566676664
No 256
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=69.60 E-value=16 Score=36.22 Aligned_cols=80 Identities=18% Similarity=0.041 Sum_probs=59.6
Q ss_pred HHHccCCCChhHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhh--------------------C
Q psy9159 148 KAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEEL--------------------A 207 (259)
Q Consensus 148 kAl~l~P~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l--------------------~ 207 (259)
..+..-|.++..-+.+|++++.. |++++|..+|++|-.- .
T Consensus 833 ~l~~~~~~~~~~~yl~g~~~L~~--------------------ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~ 892 (1139)
T 4fhn_B 833 QLIGWLNSDPIAVYLKALIYLKS--------------------KEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 892 (1139)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTT
T ss_pred HHhhhccCCcHHHHHHHHHHHhc--------------------CCHHHHHHHHHHHhhhhcccchhhhhhcccccccccc
Confidence 34556788888889999999886 7789999999887321 1
Q ss_pred C--CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCcc
Q psy9159 208 P--APWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYE 247 (259)
Q Consensus 208 P--~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~~ 247 (259)
+ +..+..|+.+...+...|.++.+++.-+.|++..+.+++
T Consensus 893 ~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~ 934 (1139)
T 4fhn_B 893 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDE 934 (1139)
T ss_dssp TSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCH
T ss_pred cccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCCh
Confidence 1 012345777888999999999999999999986654443
No 257
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=68.58 E-value=44 Score=26.94 Aligned_cols=34 Identities=6% Similarity=-0.072 Sum_probs=24.8
Q ss_pred CCcCCHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQP-NDPDVLYRLAKACH 76 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p-~~~~~~~~la~~~~ 76 (259)
.. ++|++.....+++.+.++ =+.+=...|+.+|-
T Consensus 16 qa-eRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYK 50 (248)
T 3uzd_A 16 QA-ERYDDMAAAMKNVTELNEPLSNEERNLLSVAYK 50 (248)
T ss_dssp HT-TCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred Hh-cCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHH
Confidence 44 899999999999988765 34555566666664
No 258
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=67.46 E-value=6.9 Score=25.82 Aligned_cols=17 Identities=47% Similarity=0.429 Sum_probs=10.7
Q ss_pred CCcHHHHHHHHHHHHhh
Q psy9159 190 EPTAEDAIANCLKAEEL 206 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l 206 (259)
.|+|++|+.+|..|++.
T Consensus 24 ~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 24 EGKVEDAITYYKKAIEV 40 (83)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHH
Confidence 46666666666666653
No 259
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.44 E-value=27 Score=31.49 Aligned_cols=18 Identities=22% Similarity=0.062 Sum_probs=15.5
Q ss_pred CcHHHHHHHHHHHHhhCC
Q psy9159 191 PTAEDAIANCLKAEELAP 208 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P 208 (259)
++|.+|.+++..|+..-|
T Consensus 284 ~~Y~eA~~~L~~A~rkap 301 (523)
T 4b4t_S 284 LDYSTANEYIIAAIRKAP 301 (523)
T ss_dssp TCHHHHHHHHHHHTSSCS
T ss_pred ccHHHHHHHHHHHHHhCC
Confidence 788999999999988776
No 260
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=65.05 E-value=46 Score=27.03 Aligned_cols=32 Identities=9% Similarity=0.021 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHhhcC--C-CCHHHHHHHHHHHH
Q psy9159 45 DDKAKAYNLTMELNNKQ--P-NDPDVLYRLAKACH 76 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~--p-~~~~~~~~la~~~~ 76 (259)
++|++.+...+++.+.+ | =+++=...|..+|-
T Consensus 22 eRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYK 56 (260)
T 1o9d_A 22 ERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYK 56 (260)
T ss_dssp TCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHH
Confidence 89999999999998866 3 45666666777774
No 261
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=64.53 E-value=17 Score=33.73 Aligned_cols=50 Identities=10% Similarity=-0.039 Sum_probs=43.8
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchh
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIK 82 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~ 82 (259)
.++..+...+ .. |+|.-|.++...++..+|+|.++...++.+|.++|-..
T Consensus 451 ~~~~~a~~~~--~~-g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 451 RLLEQARASY--AR-GEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHH--HT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH--HC-CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 4566777777 56 99999999999999999999999999999999998543
No 262
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=64.37 E-value=57 Score=27.90 Aligned_cols=16 Identities=6% Similarity=-0.128 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHhhc
Q psy9159 65 PDVLYRLAKACHCLYD 80 (259)
Q Consensus 65 ~~~~~~la~~~~~~g~ 80 (259)
..+++++|.+|.+++.
T Consensus 114 a~VLfNiaal~sq~A~ 129 (376)
T 3r9m_A 114 ISMGFNVALWYTKYAS 129 (376)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5778888888888764
No 263
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=64.17 E-value=67 Score=27.31 Aligned_cols=45 Identities=16% Similarity=0.035 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhhchhcccC--cHHHHHHHHHHHHHHHHHHHHhC
Q psy9159 65 PDVLYRLAKACHCLYDIKRREN--DKEASEKYILQGIEYAKKAMELA 109 (259)
Q Consensus 65 ~~~~~~la~~~~~~g~~~~~~~--~~~~~~~~~~~A~~~~~kal~~~ 109 (259)
..+++++|.+|.++|....+.. ........+..|..+|+-..+.-
T Consensus 117 a~VLfNiaal~s~~a~~~~r~~~~glK~A~~~fq~AAG~f~~l~~~~ 163 (363)
T 3rau_A 117 ACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHF 163 (363)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6788888888888875321101 11233445555655555554433
No 264
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=62.47 E-value=12 Score=25.27 Aligned_cols=25 Identities=32% Similarity=0.360 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHh
Q psy9159 215 QLLIAKCYIEAGEYAKAVQWLDKAK 239 (259)
Q Consensus 215 ~~~la~~~~~~g~~~eA~~~~~kal 239 (259)
+-.+|..+...|+|++||++.++|.
T Consensus 18 ~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 18 QSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4456677777788888877776665
No 265
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=60.81 E-value=82 Score=27.18 Aligned_cols=61 Identities=21% Similarity=0.150 Sum_probs=46.5
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHHHhh----C-CCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 179 KIAVLIVSDLDEPTAEDAIANCLKAEEL----A-PAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 179 ~~~~~~~~~~~~g~~~eAi~~~~kAi~l----~-P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
+++..++. .|+|.+|.+.+.+..+- + +....+++..-..+|..+|++.++...+.+|....
T Consensus 104 kL~~l~~~---~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 104 RLIALYFD---TALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTA 169 (394)
T ss_dssp HHHHHHHH---TTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---hhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 33444544 59999999999988873 2 21334678888899999999999999999997654
No 266
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=58.36 E-value=58 Score=26.55 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=37.8
Q ss_pred HHHHHHhhchhhHHHHHhcHHHHHHHHHHHHc-----c--CCCChhHH---HHHHHHHHHhhccchHHHHHHHHHhcCCC
Q psy9159 120 GICVGANGQFQSLKEKIKCGVVFRDQMNKAIQ-----M--APKDFTLY---SLKGRYQYEISKLSFFERKIAVLIVSDLD 189 (259)
Q Consensus 120 a~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~-----l--~P~~~~~~---~~lG~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (259)
|-.+..+..+....++......+.+.|++|.+ + .|+||.-+ .+.+.+|++.
T Consensus 149 GDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEI------------------- 209 (268)
T 3efz_A 149 GDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDL------------------- 209 (268)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTT-------------------
T ss_pred chHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHH-------------------
Confidence 44444444443333444444556677777653 5 88888322 2223344433
Q ss_pred CCcHHHHHHHHHHHHhh
Q psy9159 190 EPTAEDAIANCLKAEEL 206 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l 206 (259)
.++.++|+...++|++-
T Consensus 210 ln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 210 LGNPEGAMKFANRAIQA 226 (268)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 37788888888887765
No 267
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=58.32 E-value=78 Score=27.15 Aligned_cols=26 Identities=15% Similarity=0.155 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHh
Q psy9159 214 NQLLIAKCYIEAGEYAKAVQWLDKAK 239 (259)
Q Consensus 214 ~~~~la~~~~~~g~~~eA~~~~~kal 239 (259)
+++..|..+...+++.+|+.+++.|.
T Consensus 259 A~y~~a~~~~e~~k~GeaIa~L~~A~ 284 (392)
T 1zb1_A 259 SAYYHGLHLEEENRVGEAIAFLDFSM 284 (392)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHH
Confidence 35556666777778888877777665
No 268
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=56.82 E-value=85 Score=26.13 Aligned_cols=48 Identities=8% Similarity=-0.009 Sum_probs=28.4
Q ss_pred chhHHHHHhhcCCcCCHHHHHHHHHHHhhcC------CCCHHHHHHHHHHHHHhhch
Q psy9159 31 KYPEIDRLLYYGKKDDKAKAYNLTMELNNKQ------PNDPDVLYRLAKACHCLYDI 81 (259)
Q Consensus 31 ~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~------p~~~~~~~~la~~~~~~g~~ 81 (259)
.+.+....+ .. |+|=||.+.++....+. .+..++++.-+..+...|+.
T Consensus 16 ~l~rl~~~I--~~-G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~ 69 (312)
T 2wpv_A 16 TLQRFENKI--KA-GDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQG 69 (312)
T ss_dssp HHHHHHHHH--HH-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHh--hc-cChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCc
Confidence 445555555 45 88888887776665431 23445555556666666654
No 269
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.92 E-value=7.6 Score=27.45 Aligned_cols=45 Identities=11% Similarity=0.007 Sum_probs=29.4
Q ss_pred cHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCC
Q psy9159 192 TAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 192 ~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~ 245 (259)
.+++|..+..+|+++|-. |.--..+.-|.+.++.+++++.++..-
T Consensus 18 ~h~~AF~~Is~AL~~DE~---------g~k~~Al~lYk~GI~eLe~Gl~I~~~~ 62 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL---------GQKEEAKNYYKQGIGHLLRGISISSKE 62 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH---------TCHHHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred HHHHHHHHHHHHhhhhhc---------CCHHHHHHHHHHHHHHHHHhccccccC
Confidence 478999999999998751 111122223566677777888887653
No 270
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=55.64 E-value=79 Score=25.44 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=36.4
Q ss_pred HHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHH-----HhCCCChHHHHHHHHHHHH-------hhchhhHHHHHhc
Q psy9159 71 LAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAM-----ELAPNNSNTQKWYGICVGA-------NGQFQSLKEKIKC 138 (259)
Q Consensus 71 la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal-----~~~P~~~~~~~~la~~~~~-------~~~~~~~~~~~~~ 138 (259)
.|..|..+..+. ..+++....+.|...|++|. .+.|.||- .||.++.. +++...+
T Consensus 127 KGDyyRYlAE~~----~g~~r~~~~~~a~~aY~~A~~iA~~~L~pthPi---rLGLaLNfSVFyYEIln~~~~A------ 193 (248)
T 3uzd_A 127 KGDYYRYLAEVA----TGEKRATVVESSEKAYSEAHEISKEHMQPTHPI---RLGLALNYSVFYYEIQNAPEQA------ 193 (248)
T ss_dssp HHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHH---HHHHHHHHHHHHHHTSCCHHHH------
T ss_pred hhhHHHHHHHhc----CchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcH---HHHHHHHHHHHHHHHcCCHHHH------
Confidence 355554444332 23345555667777777765 47788884 45544432 2222221
Q ss_pred HHHHHHHHHHHHc
Q psy9159 139 GVVFRDQMNKAIQ 151 (259)
Q Consensus 139 ~~~a~~~~~kAl~ 151 (259)
+..|+..|+.|+.
T Consensus 194 c~lAk~Afd~Ai~ 206 (248)
T 3uzd_A 194 CHLAKTAFDDAIA 206 (248)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 2245667777765
No 271
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=54.94 E-value=79 Score=25.20 Aligned_cols=34 Identities=9% Similarity=-0.096 Sum_probs=25.5
Q ss_pred CCcCCHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQP-NDPDVLYRLAKACH 76 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p-~~~~~~~~la~~~~ 76 (259)
.. ++|++..+..+++.+.++ =+.+=...|+.+|-
T Consensus 20 qa-eRyddM~~~mk~v~~~~~eLs~EERnLLSvaYK 54 (236)
T 3iqu_A 20 QA-ERYEDMAAFMKGAVEKGEELSCEERNLLSVAYK 54 (236)
T ss_dssp HT-TCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHH
T ss_pred Hh-ccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHH
Confidence 45 999999999999988765 34555666777764
No 272
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=53.49 E-value=53 Score=26.25 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHH-----HhCCCChHHHHHHHHHH
Q psy9159 91 SEKYILQGIEYAKKAM-----ELAPNNSNTQKWYGICV 123 (259)
Q Consensus 91 ~~~~~~~A~~~~~kal-----~~~P~~~~~~~~la~~~ 123 (259)
+....+.|...|++|. .+.|.||- .||.++
T Consensus 145 r~~~~e~a~~aY~~A~~iA~~~L~pthPi---rLGLaL 179 (236)
T 3iqu_A 145 KKRIIDSARSAYQEAMDISKKEMPPTNPI---RLGLAL 179 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTCHH---HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCcH---HHHHHH
Confidence 3344456666666554 47788884 455444
No 273
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=52.70 E-value=29 Score=23.31 Aligned_cols=35 Identities=9% Similarity=0.132 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchh
Q psy9159 93 KYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQ 130 (259)
Q Consensus 93 ~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~ 130 (259)
+...+++....++++.+|+||..+ |.....++++.
T Consensus 30 ~~~~~~l~~Al~~L~~~psNPa~L---Ae~Qa~lseyn 64 (92)
T 2g0u_A 30 KDLNKQLQDAQANLTKNPSDPTAL---ANYQMIMSEYN 64 (92)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHH---HHHHHHHHHHH
Confidence 345577777778889999999754 44455555544
No 274
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=52.05 E-value=80 Score=27.23 Aligned_cols=38 Identities=18% Similarity=0.085 Sum_probs=23.4
Q ss_pred CCcHHHHHHHHHHHHhhCCC----CcHHhHHHHHHHHHHhCC
Q psy9159 190 EPTAEDAIANCLKAEELAPA----PWKENQLLIAKCYIEAGE 227 (259)
Q Consensus 190 ~g~~~eAi~~~~kAi~l~P~----~~~~~~~~la~~~~~~g~ 227 (259)
.++|.+|-.+|-.+++--.. ....+..+++.|-+..++
T Consensus 194 ~rdyk~A~~~F~eaf~~f~~~~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 194 ERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHcCC
Confidence 38899999999988753220 112344556666666665
No 275
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=51.54 E-value=71 Score=27.47 Aligned_cols=57 Identities=14% Similarity=0.034 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhhC----CCCcHHhHHHHHHHHHHhCCHHHHHHHHHHH---hcCCCCCccchhh
Q psy9159 195 DAIANCLKAEELA----PAPWKENQLLIAKCYIEAGEYAKAVQWLDKA---KAIPVVSYESHDL 251 (259)
Q Consensus 195 eAi~~~~kAi~l~----P~~~~~~~~~la~~~~~~g~~~eA~~~~~ka---l~l~p~~~~~~~~ 251 (259)
.++..|.+||... .|+....|.++|-++.+.+++.+|++..-.| +..-.-+-||.++
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEI 338 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEM 338 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHH
Confidence 3788888888753 2245677899999999999999999988776 3444444555444
No 276
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=51.34 E-value=81 Score=24.23 Aligned_cols=178 Identities=14% Similarity=0.020 Sum_probs=99.4
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHH--
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAM-- 106 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal-- 106 (259)
+-.+.-.-.++ -+ |.|.+++-.+... +.....+--+.+|..+.++. .|+...++.+
T Consensus 34 eY~lL~~I~Ly--yn-gEY~R~Lf~L~~l-----NT~Ts~YYk~LCy~klKdYk--------------kA~~~le~il~~ 91 (242)
T 3kae_A 34 EYRMLMSIVLY--LN-GEYTRALFHLHKL-----NTCTSKYYESLCYKKKKDYK--------------KAIKSLESILEG 91 (242)
T ss_dssp CTHHHHHHHHH--HT-TCHHHHHHHHHTC-----CBHHHHHHHHHHHHHTTCHH--------------HHHHHHHHHHTT
T ss_pred HHHhhhhhhhh--hc-chHhHHHHHHHhc-----chHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHhc
Confidence 33344444566 47 9999998877664 55666677778888887765 8888888888
Q ss_pred Hh---------------CCCChHHHH-HHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhHHHHHHHHHHHh
Q psy9159 107 EL---------------APNNSNTQK-WYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEI 170 (259)
Q Consensus 107 ~~---------------~P~~~~~~~-~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~~~~lG~~~~~~ 170 (259)
.+ ||.+-+.++ .+|.++...|+-+ +++.++.......|-.+.+-..+= +.
T Consensus 92 kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~----------EaI~y~~~Sf~~~~lf~~vEnliy----eN 157 (242)
T 3kae_A 92 KVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYRE----------EGIGHYVRSFGKSFLFSPVENLLL----EN 157 (242)
T ss_dssp CSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHH----------HHHHHHHHHHHHCCCHHHHHHHHH----TT
T ss_pred ccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHH----------HhhhHhhhhcCCccccchHHHHHh----hc
Confidence 22 344555543 4677777777655 456677777776665554432221 00
Q ss_pred hccc-hHHHHHHHHHhcCCC--CCcHHHHH--------HHHHHHHhhCCCCc-HHhHHHHHHHHHHhCCHHHHHHHHHHH
Q psy9159 171 SKLS-FFERKIAVLIVSDLD--EPTAEDAI--------ANCLKAEELAPAPW-KENQLLIAKCYIEAGEYAKAVQWLDKA 238 (259)
Q Consensus 171 ~~~~-~~~~~~~~~~~~~~~--~g~~~eAi--------~~~~kAi~l~P~~~-~~~~~~la~~~~~~g~~~eA~~~~~ka 238 (259)
..+ ...+. .....|..+ ...+.+.+ ...++=..--| .. +..-..-|..|..+|-.+++..+|...
T Consensus 158 -~vp~~~d~~-~i~~~~~~~i~~~y~~d~~~lHe~~s~~~ikkY~n~iP-GiGSY~va~aa~~yf~lg~~d~s~~lf~~l 234 (242)
T 3kae_A 158 -KVPQKRDKE-NVRQTGRRGIEEEYVSDSIEFHESLSPSLVKKYMEHVP-GIGSYFISNAARRYFNLGMNDKSKACFELV 234 (242)
T ss_dssp -CCCCCC------------CHHHHHHHHHHHHHHHCCHHHHHHHHTSTT-THHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -CCCcccchH-HHHhhhhccchhhhhhhHHHHHHhccHHHHHHHHHhCC-CchhHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 000 00000 000000000 00011111 12222223335 32 122345678899999999999999999
Q ss_pred hcCCCCC
Q psy9159 239 KAIPVVS 245 (259)
Q Consensus 239 l~l~p~~ 245 (259)
...+|..
T Consensus 235 R~kDP~F 241 (242)
T 3kae_A 235 RRKDPMF 241 (242)
T ss_dssp HHHSTTT
T ss_pred HhcCCCc
Confidence 9988863
No 277
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=51.22 E-value=24 Score=22.69 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=23.6
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhcCCCCC
Q psy9159 216 LLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245 (259)
Q Consensus 216 ~~la~~~~~~g~~~eA~~~~~kal~l~p~~ 245 (259)
..+|..+...|++++|...|-+|+..-|..
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 557888888888888888888888877553
No 278
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=49.97 E-value=74 Score=31.48 Aligned_cols=49 Identities=10% Similarity=-0.103 Sum_probs=42.1
Q ss_pred CcHHHHHHHHHHHH-----hhCCCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 191 PTAEDAIANCLKAE-----ELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 191 g~~~eAi~~~~kAi-----~l~P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
|+.++|.+.|.+.. ...| +...|..|-..|.+.|+.++|.+.|++-.+.
T Consensus 141 G~leeA~~Lf~eM~~m~~kG~~P--dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~ 194 (1134)
T 3spa_A 141 DQLPLAHHLLVVHHGQRQKRKLL--TLDMYNAVMLGWARQGAFKELVYVLFMVKDA 194 (1134)
T ss_dssp TCHHHHHHHHHHHHHSHHHHTTC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhhcCCCC--CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHc
Confidence 88999999997644 3567 4788999999999999999999999998764
No 279
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=48.37 E-value=1.3e+02 Score=25.68 Aligned_cols=26 Identities=8% Similarity=0.109 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 215 QLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 215 ~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
++..|......+++.+|+.+++.|.+
T Consensus 278 ~y~~a~~~~e~~k~GeaIa~L~~A~~ 303 (380)
T 3c3r_A 278 EYHQSILAKQQKKFGEEIARLQHAAE 303 (380)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 45556667777888888888877754
No 280
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=45.40 E-value=1.2e+02 Score=24.54 Aligned_cols=34 Identities=6% Similarity=-0.079 Sum_probs=25.4
Q ss_pred CCcCCHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQP-NDPDVLYRLAKACH 76 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~p-~~~~~~~~la~~~~ 76 (259)
.. ++|++.++..+++.+.++ =+.+=...|+.+|-
T Consensus 43 qa-eRYddMv~~MK~v~~~~~eLt~EERNLLSvAYK 77 (261)
T 3ubw_A 43 QA-ERYDEMVESMKKVAGMDVELTVEERNLLSVAYK 77 (261)
T ss_dssp HT-TCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred Hh-ccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHH
Confidence 44 999999999999988765 34555566777764
No 281
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=44.99 E-value=59 Score=21.13 Aligned_cols=24 Identities=21% Similarity=0.308 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCh
Q psy9159 90 ASEKYILQGIEYAKKAMELAPNNS 113 (259)
Q Consensus 90 ~~~~~~~~A~~~~~kal~~~P~~~ 113 (259)
+....+.+|++++.+++..+|+..
T Consensus 29 eAl~lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 29 DAITYYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHH
Confidence 777888899999999999888654
No 282
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=44.25 E-value=20 Score=23.31 Aligned_cols=26 Identities=19% Similarity=0.354 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 215 QLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 215 ~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
...+|.=|..+|+|+.|+.+|+.+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 56788888899999999999988875
No 283
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=43.40 E-value=2e+02 Score=26.41 Aligned_cols=26 Identities=4% Similarity=-0.243 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 216 LLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 216 ~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
+..+..+...|....|......++..
T Consensus 385 ~~r~~~L~~~g~~~~a~~ew~~~~~~ 410 (618)
T 1qsa_A 385 MARVRELMYWNLDNTARSEWANLVKS 410 (618)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCChhhHHHHHHHHHhc
Confidence 45677788889988888777777653
No 284
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=43.03 E-value=69 Score=21.06 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q psy9159 93 KYILQGIEYAKKAMELAPNNSNTQKWYGICVGA 125 (259)
Q Consensus 93 ~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~ 125 (259)
+...+++....++|+.+|+||..+..|-..+..
T Consensus 24 ~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~e 56 (85)
T 2ca5_A 24 QTLQGELTLALDKLAKNPSNPQLLAEYQSKLSE 56 (85)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 445677888888999999999865555444433
No 285
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=43.03 E-value=60 Score=25.04 Aligned_cols=32 Identities=19% Similarity=-0.117 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHhhccchHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCC
Q psy9159 158 TLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPA 209 (259)
Q Consensus 158 ~~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~ 209 (259)
.+.|.+|++++.. ++|.+|.+++..|+..-|.
T Consensus 15 ~Y~YYlGr~~~~~--------------------~~y~~A~~~L~~A~~~~~~ 46 (203)
T 3t5x_A 15 TYKYYVGRKAMFD--------------------SDFKQAEEYLSFAFEHCHR 46 (203)
T ss_dssp HHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHH--------------------hCHHHHHHHHHHHHHHCCH
Confidence 5778899987763 7899999999999998773
No 286
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=42.52 E-value=28 Score=26.97 Aligned_cols=36 Identities=11% Similarity=0.032 Sum_probs=31.4
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCc
Q psy9159 211 WKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSY 246 (259)
Q Consensus 211 ~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p~~~ 246 (259)
.....+++|..++..+++.+|.+.+..|+..-|.+.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 355678899999999999999999999999877654
No 287
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=42.02 E-value=1.3e+02 Score=23.90 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHH-----HhCCCChHHHHHHHHHH
Q psy9159 89 EASEKYILQGIEYAKKAM-----ELAPNNSNTQKWYGICV 123 (259)
Q Consensus 89 ~~~~~~~~~A~~~~~kal-----~~~P~~~~~~~~la~~~ 123 (259)
+++....+.|...|++|+ .+.|.||- .||.++
T Consensus 140 ~~r~~~~e~a~~aY~~A~~iA~~~L~pthPi---rLgLaL 176 (234)
T 2br9_A 140 NDRKEAAENSLVAYKAASDIAMTELPPTHPI---RLGLAL 176 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTCHH---HHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccCCCCCcH---HHHHHH
Confidence 455566677777777776 46788874 455444
No 288
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=40.28 E-value=65 Score=28.21 Aligned_cols=46 Identities=13% Similarity=-0.001 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhhC----CCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHh
Q psy9159 194 EDAIANCLKAEELA----PAPWKENQLLIAKCYIEAGEYAKAVQWLDKAK 239 (259)
Q Consensus 194 ~eAi~~~~kAi~l~----P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal 239 (259)
..++..|.+||... -+.....|.++|-.+...+++.+|++.+-.+-
T Consensus 281 p~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa 330 (489)
T 4gq4_A 281 PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 330 (489)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhh
Confidence 35667777777742 22345668999999999999999999998873
No 289
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=46.26 E-value=6 Score=36.95 Aligned_cols=51 Identities=20% Similarity=0.090 Sum_probs=43.9
Q ss_pred CCchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchh
Q psy9159 29 NSKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIK 82 (259)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~ 82 (259)
+.++..+...+ .. |+|+-|.+++..++..+|+|.++...++.+|.++|-..
T Consensus 462 ~~~~~~a~~~~--~~-g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~ 512 (668)
T 2yhe_A 462 DAVLKQMRAAI--DK-GDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQT 512 (668)
Confidence 34566777777 66 99999999999999999999999999999999998543
No 290
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=40.02 E-value=2.3e+02 Score=26.32 Aligned_cols=26 Identities=8% Similarity=0.022 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 215 QLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 215 ~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
+++.|......+++.+|+.+++.|..
T Consensus 263 ~y~~a~~~~e~~k~GeaIa~L~~A~~ 288 (704)
T 2xs1_A 263 EYHQSILAKQQYYFGEEIARLQHAAE 288 (704)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHhHHHHHHHHHHHHHH
Confidence 45556666677888888888877754
No 291
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=39.84 E-value=1.5e+02 Score=23.98 Aligned_cols=35 Identities=6% Similarity=-0.056 Sum_probs=26.6
Q ss_pred CCcCCHHHHHHHHHHHhhcC----CCCHHHHHHHHHHHHH
Q psy9159 42 GKKDDKAKAYNLTMELNNKQ----PNDPDVLYRLAKACHC 77 (259)
Q Consensus 42 ~~~~~~~~A~~~~~~~~~~~----p~~~~~~~~la~~~~~ 77 (259)
.. ++|++.+...+++.+.+ .=+.+=...|+.+|-.
T Consensus 40 qa-eRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKN 78 (260)
T 2npm_A 40 QA-ERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKN 78 (260)
T ss_dssp HT-TCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHH
T ss_pred Hh-cCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Confidence 45 99999999999999865 3456666677777743
No 292
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=37.59 E-value=35 Score=27.74 Aligned_cols=30 Identities=23% Similarity=0.235 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhcCCCC
Q psy9159 215 QLLIAKCYIEAGEYAKAVQWLDKAKAIPVV 244 (259)
Q Consensus 215 ~~~la~~~~~~g~~~eA~~~~~kal~l~p~ 244 (259)
...+|.+....++|++.++.++++.++++.
T Consensus 34 lv~~AKLaeqaeRYddMv~~MK~v~~~~~e 63 (261)
T 3ubw_A 34 LVYQAKLAEQAERYDEMVESMKKVAGMDVE 63 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhcCCc
Confidence 444555555555555555555555555544
No 293
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=37.55 E-value=81 Score=29.20 Aligned_cols=36 Identities=11% Similarity=0.041 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhch
Q psy9159 94 YILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQF 129 (259)
Q Consensus 94 ~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~ 129 (259)
.+.-|.+....++..+|+|..+...++.++.++|-.
T Consensus 464 ~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 464 EYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999888743
No 294
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=35.65 E-value=30 Score=24.33 Aligned_cols=16 Identities=19% Similarity=0.121 Sum_probs=11.7
Q ss_pred CcHHHHHHHHHHHHhh
Q psy9159 191 PTAEDAIANCLKAEEL 206 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l 206 (259)
|+|++|+.+|..|+++
T Consensus 32 g~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 32 GNYEEALQLYQHAVQY 47 (117)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH
Confidence 7777777777777763
No 295
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=34.18 E-value=1.9e+02 Score=23.51 Aligned_cols=32 Identities=19% Similarity=0.421 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHH-----h--CCCChHHHHHHHHHHH
Q psy9159 90 ASEKYILQGIEYAKKAME-----L--APNNSNTQKWYGICVG 124 (259)
Q Consensus 90 ~~~~~~~~A~~~~~kal~-----~--~P~~~~~~~~la~~~~ 124 (259)
++....+.|...|++|.+ + .|.+|- .||.++.
T Consensus 163 erk~~~e~a~~aYq~A~eiA~~~L~~~pThPi---RLGLaLN 201 (268)
T 3efz_A 163 EKNQCIKQAVEFYEDALQRERSFLEKYPSDPL---YLATILN 201 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCChH---HHHHHHH
Confidence 444555566666666553 3 788874 4555443
No 296
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=32.58 E-value=81 Score=27.92 Aligned_cols=50 Identities=22% Similarity=0.260 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhhCCCCc----------HHhHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 193 AEDAIANCLKAEELAPAPW----------KENQLLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P~~~----------~~~~~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
|+..++-++.|+.+-|... ..++..+|.+|+..|++++|++..++++...
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 5666667777777655211 2357789999999999999999999998643
No 297
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=32.57 E-value=2.1e+02 Score=27.69 Aligned_cols=22 Identities=18% Similarity=0.047 Sum_probs=16.9
Q ss_pred CcHHHHHHHHHHHHhhCCCCcH
Q psy9159 191 PTAEDAIANCLKAEELAPAPWK 212 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P~~~~ 212 (259)
+.++-++.+.+.||+.-..+..
T Consensus 911 ~a~~~vi~fA~lAI~~~~~dd~ 932 (950)
T 4gq2_M 911 SAYIDALEFSLLADASKETDDE 932 (950)
T ss_dssp TCHHHHHHHHHHHHHTCCSCCH
T ss_pred CCHHHHHHHHHHHHhhcccCCc
Confidence 7799999999999986432443
No 298
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=31.60 E-value=43 Score=27.19 Aligned_cols=27 Identities=15% Similarity=0.266 Sum_probs=13.5
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 216 LLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 216 ~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
.++|.+....++|++.+++++++.+++
T Consensus 32 v~~AkLaeqaeRyddmv~~mk~v~~~~ 58 (260)
T 2npm_A 32 VYMAKLAEQAERYDEMAKYMKDVVEAR 58 (260)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcc
Confidence 344444445555555555555555544
No 299
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=30.46 E-value=1.1e+02 Score=19.81 Aligned_cols=24 Identities=17% Similarity=0.127 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCh
Q psy9159 90 ASEKYILQGIEYAKKAMELAPNNS 113 (259)
Q Consensus 90 ~~~~~~~~A~~~~~kal~~~P~~~ 113 (259)
+....+.+|++++..++..+|+..
T Consensus 37 eAl~lY~~aie~l~~alk~e~d~~ 60 (83)
T 2w2u_A 37 EAITNYKKAIEVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHH
Confidence 777888899999999999988654
No 300
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=29.25 E-value=41 Score=22.76 Aligned_cols=28 Identities=25% Similarity=0.404 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhcCCC
Q psy9159 216 LLIAKCYIEAGEYAKAVQWLDKAKAIPV 243 (259)
Q Consensus 216 ~~la~~~~~~g~~~eA~~~~~kal~l~p 243 (259)
..+|..+...|+++.|+..|-+|+..-|
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 3466667777777777777777766543
No 301
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=28.99 E-value=1.3e+02 Score=19.96 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCCh
Q psy9159 46 DKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNS 113 (259)
Q Consensus 46 ~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~ 113 (259)
-.+.|++++.++++. -..|++. +....+..|++++..++..+|+..
T Consensus 11 ~l~~Ai~lv~~Ave~---------------D~~g~y~-------eAl~~Y~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 11 DSTAAVAVLKRAVEL---------------DAESRYQ-------QALVCYQEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHHHHHH---------------HHTTCHH-------HHHHHHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHH---------------HHhCCHH-------HHHHHHHHHHHHHHHHHHHCCCHH
Confidence 456677777777543 2234443 677788899999999999988654
No 302
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.37 E-value=1.1e+02 Score=21.48 Aligned_cols=46 Identities=22% Similarity=0.293 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN 112 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~ 112 (259)
..|++|+.++.++++.+. .| +++..+..|.+|+..++++|.+..+-
T Consensus 17 ~~h~~AF~~Is~AL~~DE---------------~g-------~k~~Al~lYk~GI~eLe~Gl~I~~~~ 62 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDE---------------LG-------QKEEAKNYYKQGIGHLLRGISISSKE 62 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH---------------HT-------CHHHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred HHHHHHHHHHHHHhhhhh---------------cC-------CHHHHHHHHHHHHHHHHHhccccccC
Confidence 456688888888877542 12 45577888899999999999999853
No 303
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=27.91 E-value=36 Score=26.86 Aligned_cols=19 Identities=32% Similarity=0.375 Sum_probs=9.6
Q ss_pred HHhCCHHHHHHHHHHHhcC
Q psy9159 223 IEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 223 ~~~g~~~eA~~~~~kal~l 241 (259)
++.|.|++|.+.+++...-
T Consensus 125 iek~~f~kA~eiLkr~~~~ 143 (235)
T 3bu8_A 125 IKNKEFEKASKILKKHMSK 143 (235)
T ss_dssp HHTTCHHHHHHHHHHHSTT
T ss_pred HHhcchHHHHHHHHHHhcC
Confidence 4445555555555555443
No 304
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=27.78 E-value=2.5e+02 Score=22.99 Aligned_cols=193 Identities=11% Similarity=-0.010 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchh-------cc---cCcHHHHHHHHHHHHHHHHHHHHhCCCC----
Q psy9159 47 KAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIK-------RR---ENDKEASEKYILQGIEYAKKAMELAPNN---- 112 (259)
Q Consensus 47 ~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~-------~~---~~~~~~~~~~~~~A~~~~~kal~~~P~~---- 112 (259)
++.|++..+-.++..|+++...+.++++..+.-+.. +. ..-+......+++|..++++.-+.-|..
T Consensus 101 FDaALERielGLe~~p~s~~L~la~SKILlqrI~~~~~~~s~eE~~~~~p~~~ta~kmi~qa~~~l~~Laqk~~e~~t~~ 180 (346)
T 3qtm_A 101 IDAAIERAQLGLDAPGNESRLFLALARAYLEKVRVLVWRHDNEESLANIPVTQLVNPYIEKAIQYLRPLAQDSTEYFDAL 180 (346)
T ss_dssp HHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHHHHHHHHHHHSTTSCCCTTC
T ss_pred HHHHHHHHHhhhhhCCCChhHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHHHHHhhChhhcccc
Confidence 568999999999999999999999999987643211 00 0114556778889999888554433432
Q ss_pred ----hHHHHHHHHHHHHhhchhhHHHHHhcHHHHHHHHHHHHccCCCChhH-----HHHHHHHHHHhhc-------cc--
Q psy9159 113 ----SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTL-----YSLKGRYQYEISK-------LS-- 174 (259)
Q Consensus 113 ----~~~~~~la~~~~~~~~~~~~~~~~~~~~~a~~~~~kAl~l~P~~~~~-----~~~lG~~~~~~~~-------~~-- 174 (259)
..-.+-+...+.+.|+.-.-.-.+.-+.. ...+--+...+|+-+.. +-.+|.++....+ -.
T Consensus 181 tld~~rpl~~lS~yl~~~~~~~SE~flldvc~~-~t~l~lks~~d~nTpa~~kl~Aq~av~t~~t~vAeyy~DLlDd~es 259 (346)
T 3qtm_A 181 TPDSLRPLYILSSYLFQFGDQFSEAFLLDVCSI-ITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFAEYYMDLLDNSES 259 (346)
T ss_dssp CTTTTTTHHHHHHHHHHTGGGSCHHHHHHHHHH-HHHHHHHTTCSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred ccchhhHHHHHHHHHHHhccchHHHHHHHHHHH-HHHHHHHHhhccCChhHHHHHHHHHHhhhhhHHHHHHHHHhcccch
Confidence 22334444444444432211000110111 11112223567776653 2333333322211 00
Q ss_pred hHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhCCCCcHHhHHHHHHHHHHhCC-----------HHHHHHHHHHHhcCCC
Q psy9159 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGE-----------YAKAVQWLDKAKAIPV 243 (259)
Q Consensus 175 ~~~~~~~~~~~~~~~~g~~~eAi~~~~kAi~l~P~~~~~~~~~la~~~~~~g~-----------~~eA~~~~~kal~l~p 243 (259)
-....+..+ ......||+.+++..-++. ..+..+.+|.+.+..++ +.||....++|..+..
T Consensus 260 ~vdd~~~kA------~~~L~~aid~~~~~y~ldk--~~e~l~~lAd~kmdlan~~~~Ed~Qdk~l~EA~~~ireAq~~Gv 331 (346)
T 3qtm_A 260 NVDDLINKA------SSWLNNSVDTWNVIYTLDK--SPERLLKLADIKMDLAQIVQDEASQDNYLKEACNAIKEAQGSGV 331 (346)
T ss_dssp -CHHHHHHH------HHHHHHHHHHHHHHHHHSC--CGGGHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHH------HHHHHHHHHHHHHHHhccc--CHHHHHHHHHHHHHHHHHccChhhHHHHHHHHHHHHHHHHhcCC
Confidence 000000000 1235677777777776776 35677888888777765 6789999999988887
Q ss_pred CCccc
Q psy9159 244 VSYES 248 (259)
Q Consensus 244 ~~~~~ 248 (259)
+-++|
T Consensus 332 ~l~~d 336 (346)
T 3qtm_A 332 ELSPD 336 (346)
T ss_dssp CCCHH
T ss_pred CCChH
Confidence 65543
No 305
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=27.70 E-value=2.6e+02 Score=23.12 Aligned_cols=44 Identities=9% Similarity=-0.069 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhchhhHH
Q psy9159 90 ASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLK 133 (259)
Q Consensus 90 ~~~~~~~~A~~~~~kal~~~P~~~~~~~~la~~~~~~~~~~~~~ 133 (259)
.+.....+|+.+..+.=...-.++..|..+|..+...+++..+.
T Consensus 111 ~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~ 154 (312)
T 2wpv_A 111 NLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAE 154 (312)
T ss_dssp THHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHH
Confidence 35566677777766553323468888999999999888776443
No 306
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=27.20 E-value=1.6e+02 Score=25.61 Aligned_cols=49 Identities=18% Similarity=0.116 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhCCCC-------cHHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 193 AEDAIANCLKAEELAPAP-------WKENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P~~-------~~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
|+..++-++.|+.+-|.. ...++..+|.+|...|++++|++..++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 566666777777765521 1345778999999999999999999999863
No 307
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=26.84 E-value=55 Score=17.88 Aligned_cols=17 Identities=29% Similarity=0.518 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHhhhhh
Q psy9159 5 LFVLSLFQFAFVQFGEC 21 (259)
Q Consensus 5 ~~~~~~~~~~~~~~~~~ 21 (259)
+|++||+.|+|++.-+.
T Consensus 13 ~ffvsLFiFGfLsnDP~ 29 (38)
T 3arc_I 13 TFFVLLFVFGFLSGDPA 29 (38)
T ss_dssp HHHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHccccCCCCC
Confidence 46677777777766544
No 308
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=26.81 E-value=1.6e+02 Score=20.45 Aligned_cols=25 Identities=4% Similarity=0.183 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChH
Q psy9159 90 ASEKYILQGIEYAKKAMELAPNNSN 114 (259)
Q Consensus 90 ~~~~~~~~A~~~~~kal~~~P~~~~ 114 (259)
+....|.+|+++|..++...|.++.
T Consensus 36 eAl~lY~~Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 36 EALQLYQHAVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHH
Confidence 6778888999999999999877765
No 309
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=26.71 E-value=1.9e+02 Score=21.21 Aligned_cols=49 Identities=12% Similarity=-0.097 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhhC--CCCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhcCCC
Q psy9159 194 EDAIANCLKAEELA--PAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPV 243 (259)
Q Consensus 194 ~eAi~~~~kAi~l~--P~~~~~~~~~la~~~~~~g~~~eA~~~~~kal~l~p 243 (259)
+++.+.|.-..... - ..+.-|...|..+...|++++|.+.|+++++...
T Consensus 82 ~dp~~if~~L~~~~IG~-~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 132 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGT-LSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQA 132 (152)
T ss_dssp SCHHHHHHHHHTTTTTT-TBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHCCCcH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 33666666666543 3 4566688889999999999999999999998763
No 310
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=26.44 E-value=1.6e+02 Score=25.60 Aligned_cols=48 Identities=21% Similarity=0.324 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhhCCCC-------cHHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 193 AEDAIANCLKAEELAPAP-------WKENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P~~-------~~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
++..++-++.|+.+-|.. ...++..+|.+|...|++++|++..++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 456666777777765521 134578899999999999999999999986
No 311
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.73 E-value=3.2e+02 Score=23.56 Aligned_cols=12 Identities=8% Similarity=-0.042 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHH
Q psy9159 95 ILQGIEYAKKAM 106 (259)
Q Consensus 95 ~~~A~~~~~kal 106 (259)
+.+|...+....
T Consensus 153 ~~eA~~iL~~l~ 164 (445)
T 4b4t_P 153 IDEAADILCELQ 164 (445)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 347776666554
No 312
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=25.46 E-value=1.7e+02 Score=25.82 Aligned_cols=28 Identities=21% Similarity=0.228 Sum_probs=24.0
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 212 KENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 212 ~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
.++++..|.|+..+|+ .+|+..++++.+
T Consensus 347 aEv~Li~AEA~~~~g~-~~A~~~lN~vR~ 374 (495)
T 3lew_A 347 AEIYLINAEAKAHLND-PDAINKLNDLKT 374 (495)
T ss_dssp HHHHHHHHHHHHHTTC-TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCC-HHHHHHHHHHHH
Confidence 6789999999999999 899888887654
No 313
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=25.31 E-value=2e+02 Score=25.22 Aligned_cols=56 Identities=11% Similarity=-0.048 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhC----CCCcHHhHHHHHHHHHHhCCHHHHHHHHHHH---hcCCCCCccchhh
Q psy9159 196 AIANCLKAEELA----PAPWKENQLLIAKCYIEAGEYAKAVQWLDKA---KAIPVVSYESHDL 251 (259)
Q Consensus 196 Ai~~~~kAi~l~----P~~~~~~~~~la~~~~~~g~~~eA~~~~~ka---l~l~p~~~~~~~~ 251 (259)
++..|.+||... -|+....|.++|-++...+++.+|+...-.| +..-.-.-||.++
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEI 360 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEI 360 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHH
Confidence 677788877752 2245677999999999999999999988766 4444445555544
No 314
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=25.19 E-value=1.2e+02 Score=20.21 Aligned_cols=43 Identities=7% Similarity=-0.096 Sum_probs=29.9
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVLYRLAKACH 76 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~ 76 (259)
+.+..+..+| .. |+|=+|-+.++.+-...|. ++-.+.-|.+..
T Consensus 3 ~~~~~~~~lf--n~-g~~~eaHEvlE~~W~~~~~-~~~~~~qGLIq~ 45 (94)
T 2cwy_A 3 PDWEEVLGLW--RA-GRYYEVHEVLEPYWLKATG-EERRLLQGVILL 45 (94)
T ss_dssp CCHHHHHHHH--HT-TCHHHHHHHHHHHHHHCCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHH--hC-CChHHHHHHHHHHHhhCCC-chHHHHHHHHHH
Confidence 3466777888 67 9999999999999877754 443333444433
No 315
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=24.02 E-value=1.5e+02 Score=19.25 Aligned_cols=24 Identities=13% Similarity=0.169 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCC
Q psy9159 89 EASEKYILQGIEYAKKAMELAPNN 112 (259)
Q Consensus 89 ~~~~~~~~~A~~~~~kal~~~P~~ 112 (259)
.+....+.+|++++..++..+|+.
T Consensus 33 ~eAl~lY~~Aie~ll~alk~e~d~ 56 (86)
T 4a5x_A 33 PQALVCYQEGIDLLLQVLKGTKDN 56 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCH
Confidence 367888889999999999988864
No 316
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=23.21 E-value=1.8e+02 Score=25.29 Aligned_cols=29 Identities=31% Similarity=0.434 Sum_probs=25.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhc
Q psy9159 212 KENQLLIAKCYIEAGEYAKAVQWLDKAKA 240 (259)
Q Consensus 212 ~~~~~~la~~~~~~g~~~eA~~~~~kal~ 240 (259)
.++++..|.|+..+|+..+|+..++++.+
T Consensus 338 aEv~Li~AEA~~~~g~~~~A~~~lN~vR~ 366 (461)
T 3kez_A 338 SEAYLNAAEAAVQTGDNAKAVKYLNSIVQ 366 (461)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCchHHHHHHHHHHH
Confidence 56799999999999999999999887654
No 317
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=22.50 E-value=2.4e+02 Score=20.90 Aligned_cols=32 Identities=6% Similarity=-0.134 Sum_probs=26.2
Q ss_pred CchhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCC
Q psy9159 30 SKYPEIDRLLYYGKKDDKAKAYNLTMELNNKQPND 64 (259)
Q Consensus 30 ~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~ 64 (259)
..+..+..+| .. |+|-+|-+.++.+-...|..
T Consensus 34 ~~~~~~i~lF--n~-g~yfeaHEvLEe~W~~~~~~ 65 (161)
T 2ijq_A 34 RAVVHGVRLY--NS-GEFHESHDCFEDEWYNYGRG 65 (161)
T ss_dssp HHHHHHHHHH--HT-TCHHHHHHHHHHHTTTTCSS
T ss_pred HHHHHHHHHH--hC-CCchHHHHHHHHHHHhcCCC
Confidence 4577788888 67 99999999999998876554
No 318
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=22.43 E-value=3.2e+02 Score=22.37 Aligned_cols=68 Identities=16% Similarity=0.129 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhchhcccCcHHHHHHHHHHHHHHHHHHHHhCCCChHHH
Q psy9159 45 DDKAKAYNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQ 116 (259)
Q Consensus 45 ~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~kal~~~P~~~~~~ 116 (259)
.....|++-+...-..+ ++++.++++|.+-++.|+.. .+.+.+.+.+.+|....++|-...-+-++-+
T Consensus 270 ~~L~~aid~~~~~y~ld-k~~e~l~~lAd~kmdlan~~---~~Ed~Qdk~l~EA~~~ireAq~~Gv~l~~dy 337 (346)
T 3qtm_A 270 SWLNNSVDTWNVIYTLD-KSPERLLKLADIKMDLAQIV---QDEASQDNYLKEACNAIKEAQGSGVELSPDY 337 (346)
T ss_dssp HHHHHHHHHHHHHHHHS-CCGGGHHHHHHHHHHHHHHC---SCHHHHHHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHHHHHHHHhcc-cCHHHHHHHHHHHHHHHHHc---cChhhHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 45566777776665444 56899999999999999987 3556777889999999999988877766654
No 319
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=22.29 E-value=1.9e+02 Score=25.15 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhhCCCC-------cHHhHHHHHHHHHHhCCHHHHHHHHHHHhcC
Q psy9159 193 AEDAIANCLKAEELAPAP-------WKENQLLIAKCYIEAGEYAKAVQWLDKAKAI 241 (259)
Q Consensus 193 ~~eAi~~~~kAi~l~P~~-------~~~~~~~la~~~~~~g~~~eA~~~~~kal~l 241 (259)
++..++-++.|+.+-|.. -..++..+|.+|...|++++|++..++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 566677778887765521 1245778999999999999999999999864
No 320
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=21.38 E-value=1.7e+02 Score=18.63 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=28.6
Q ss_pred hhHHHHHhhcCCcCCHHHHHHHHHHHhhcCCCCHHHH
Q psy9159 32 YPEIDRLLYYGKKDDKAKAYNLTMELNNKQPNDPDVL 68 (259)
Q Consensus 32 ~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 68 (259)
++.++.+. .. |++++|...+-+++...|+=.+.+
T Consensus 21 V~~GE~L~--~~-g~~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 21 IQLGEELL--AQ-GDYEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHH--HT-TCHHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHH--HC-CCHHHHHHHHHHHHHHcCCHHHHH
Confidence 57788888 67 999999999999999998876654
No 321
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.97 E-value=2.1e+02 Score=25.00 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=26.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Q psy9159 213 ENQLLIAKCYIEAGEYAKAVQWLDKAKAIP 242 (259)
Q Consensus 213 ~~~~~la~~~~~~g~~~eA~~~~~kal~l~ 242 (259)
.++..+|.+|+..|++++|.+..++++...
T Consensus 192 aA~aLlARvyL~~~~~~~A~~~a~~vi~~~ 221 (460)
T 3snx_A 192 VVNGLMARAYLLTGQWGEAAKAAEAARKGY 221 (460)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 457889999999999999999999999754
No 322
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=20.64 E-value=2.3e+02 Score=25.31 Aligned_cols=38 Identities=16% Similarity=-0.091 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHhhchh
Q psy9159 45 DDKAKAYNLTMELN-NKQPNDPDVLYRLAKACHCLYDIK 82 (259)
Q Consensus 45 ~~~~~A~~~~~~~~-~~~p~~~~~~~~la~~~~~~g~~~ 82 (259)
..|++|++.++++- ..+|+.+..+..++.-|-..|++.
T Consensus 453 ~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDyy 491 (526)
T 2wb7_A 453 DEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDYY 491 (526)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHHH
Confidence 57888888888886 567777788888888888888765
No 323
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=20.58 E-value=50 Score=22.06 Aligned_cols=18 Identities=11% Similarity=-0.071 Sum_probs=14.8
Q ss_pred CcHHHHHHHHHHHHhhCC
Q psy9159 191 PTAEDAIANCLKAEELAP 208 (259)
Q Consensus 191 g~~~eAi~~~~kAi~l~P 208 (259)
..++.|..+..+|+..|-
T Consensus 11 ~~h~~AF~~Is~aL~~DE 28 (89)
T 3eab_A 11 VFHKQAFEYISIALRIDE 28 (89)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 347999999999999874
No 324
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=20.25 E-value=2.2e+02 Score=24.64 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=25.1
Q ss_pred HHhHHHHHHHHHHhC--CHHHHHHHHHHHhc
Q psy9159 212 KENQLLIAKCYIEAG--EYAKAVQWLDKAKA 240 (259)
Q Consensus 212 ~~~~~~la~~~~~~g--~~~eA~~~~~kal~ 240 (259)
.++++..|.|+..+| +..+|+..++++.+
T Consensus 335 aEv~Li~AEA~~~~gg~~~~~A~~~lN~vR~ 365 (454)
T 3myv_A 335 SEVYLIAAEAGCKLGGDAAVQGLGYLNEIVK 365 (454)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 567999999999999 89999998887754
Done!