Your job contains 1 sequence.
>psy9159
MYSKLFVLSLFQFAFVQFGECAELFAVNNSKYPEIDRLLYYGKKDDKAKAYNLTMELNNK
QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYG
ICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKI
AVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKA
IPVVSYESHDLSTTYSYKR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9159
(259 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1559836 - symbol:Rmdn2 "regulator of microtubule dyna... 320 9.1e-29 1
UNIPROTKB|Q2TBQ7 - symbol:RMDN2 "Regulator of microtubule... 299 1.5e-26 1
UNIPROTKB|Q96LZ7 - symbol:RMDN2 "Regulator of microtubule... 290 1.4e-25 1
MGI|MGI:1913552 - symbol:Rmdn1 "regulator of microtubule ... 288 2.2e-25 1
UNIPROTKB|Q32KL4 - symbol:RMDN1 "Regulator of microtubule... 286 3.6e-25 1
UNIPROTKB|F1P0I6 - symbol:FAM82A2 "Uncharacterized protei... 286 9.8e-25 1
RGD|1308697 - symbol:Rmdn3 "regulator of microtubule dyna... 284 1.5e-24 1
UNIPROTKB|F1NBF8 - symbol:FAM82B "Uncharacterized protein... 280 1.6e-24 1
RGD|1563085 - symbol:Rmdn1 "regulator of microtubule dyna... 280 1.6e-24 1
UNIPROTKB|Q5R6Z1 - symbol:RMDN3 "Regulator of microtubule... 282 2.5e-24 1
UNIPROTKB|F1RXD4 - symbol:FAM82B "Uncharacterized protein... 274 6.8e-24 1
UNIPROTKB|Q96TC7 - symbol:RMDN3 "Regulator of microtubule... 277 9.2e-24 1
MGI|MGI:1915059 - symbol:Rmdn3 "regulator of microtubule ... 277 9.2e-24 1
UNIPROTKB|Q1JQC5 - symbol:RMDN3 "Regulator of microtubule... 277 9.3e-24 1
UNIPROTKB|H0YMB1 - symbol:RMDN3 "Regulator of microtubule... 272 1.1e-23 1
UNIPROTKB|Q96DB5 - symbol:RMDN1 "Regulator of microtubule... 270 1.8e-23 1
WB|WBGene00011501 - symbol:rmd-1 species:6239 "Caenorhabd... 263 1.0e-22 1
UNIPROTKB|F1SSS8 - symbol:FAM82A2 "Uncharacterized protei... 263 3.4e-22 1
ZFIN|ZDB-GENE-070928-17 - symbol:zgc:171674 "zgc:171674" ... 248 3.9e-21 1
WB|WBGene00007786 - symbol:rmd-2 species:6239 "Caenorhabd... 245 1.1e-20 1
UNIPROTKB|E5RH53 - symbol:RMDN1 "Regulator of microtubule... 215 1.2e-17 1
UNIPROTKB|H0YB83 - symbol:RMDN1 "Regulator of microtubule... 209 5.3e-17 1
DICTYBASE|DDB_G0278793 - symbol:DDB_G0278793 "Regulator o... 198 7.7e-16 1
WB|WBGene00009369 - symbol:F33H2.6 species:6239 "Caenorha... 192 4.0e-15 1
UNIPROTKB|H0YB03 - symbol:RMDN1 "Regulator of microtubule... 189 6.9e-15 1
>RGD|1559836 [details] [associations]
symbol:Rmdn2 "regulator of microtubule dynamics 2" species:10116
"Rattus norvegicus" [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] RGD:1559836 GO:GO:0016021
GO:GO:0005739 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00530000063162 eggNOG:NOG84960 CTD:151393
HOGENOM:HOG000015374 HOVERGEN:HBG072518 OMA:GYITANT
OrthoDB:EOG408N8M EMBL:BC100261 IPI:IPI00360061
RefSeq:NP_001032277.1 UniGene:Rn.25365 PRIDE:Q498D5
Ensembl:ENSRNOT00000008045 GeneID:313840 KEGG:rno:313840
UCSC:RGD:1559836 NextBio:666893 Genevestigator:Q498D5
Uniprot:Q498D5
Length = 412
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 66/200 (33%), Positives = 111/200 (55%)
Query: 51 YNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110
+ L + K + + L+RL +A +YD+ +K+ Y G ++A+ AP
Sbjct: 202 FELLCDHKEKFSEEIEFLWRLVRAYGDMYDLSTNTQEKK---HYANVGKTLGERAITRAP 258
Query: 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEI 170
N + WY + G +F+ L+ KI CG +F+ ++ AIQ+ P++ LY LKGRY Y +
Sbjct: 259 MNGHCHLWYALLCGYVSEFEGLQNKINCGHLFKKHLDIAIQLLPEEPVLYYLKGRYCYTV 318
Query: 171 SKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAK 230
SKLS+ E+K+A + ++ T +A+ N LK EEL P N + +AKCY++ GE +
Sbjct: 319 SKLSWIEKKMAATLFGEIPSSTVHEALHNFLKTEELQPGYSVSNYMYVAKCYVDLGESRE 378
Query: 231 AVQWLDKAKAIPVVSYESHD 250
A ++ + A +P+V+ E D
Sbjct: 379 AWKFCNLALLLPIVTKEDKD 398
>UNIPROTKB|Q2TBQ7 [details] [associations]
symbol:RMDN2 "Regulator of microtubule dynamics protein 2"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR011990 GO:GO:0016021 GO:GO:0005739 Gene3D:1.25.40.10
GO:GO:0000922 GO:GO:0005874 GeneTree:ENSGT00530000063162
eggNOG:NOG84960 EMBL:BC109797 EMBL:DV832064 IPI:IPI00708381
IPI:IPI00847088 RefSeq:NP_001035598.1 UniGene:Bt.23919
Ensembl:ENSBTAT00000046712 Ensembl:ENSBTAT00000046717 GeneID:506362
KEGG:bta:506362 CTD:151393 HOGENOM:HOG000015374 HOVERGEN:HBG072518
OMA:GYITANT OrthoDB:EOG408N8M NextBio:20867577 Uniprot:Q2TBQ7
Length = 410
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/200 (31%), Positives = 109/200 (54%)
Query: 51 YNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110
+ L + K ++ + ++R A+A +Y++ +K+ Y G +KA+ AP
Sbjct: 200 FELLCDHKEKFRDEIEFIWRFARAYGDMYELSTNIQEKK---HYANIGKTLGEKAIMRAP 256
Query: 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEI 170
N WY + G +F+ L+ KI G F++ ++KAI+ P++ LY LKGRY Y +
Sbjct: 257 KNGYCHLWYAVLCGYVSEFEGLQNKINYGYRFKEHLDKAIEFLPEEPFLYYLKGRYCYAV 316
Query: 171 SKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAK 230
SKLS+ ERK+A + ++ T ++A+ N LK EEL P K N + +AKCY + +
Sbjct: 317 SKLSWIERKMAATLFGNIPSSTVQEALQNFLKVEELQPGFSKSNYMFMAKCYADLNQIDS 376
Query: 231 AVQWLDKAKAIPVVSYESHD 250
A+++ + A +P ++ E D
Sbjct: 377 AMKFCNLAVLLPCITKEDKD 396
>UNIPROTKB|Q96LZ7 [details] [associations]
symbol:RMDN2 "Regulator of microtubule dynamics protein 2"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR011990 GO:GO:0016021 GO:GO:0005739 EMBL:CH471053
Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874 eggNOG:NOG84960
CTD:151393 HOVERGEN:HBG072518 OMA:GYITANT EMBL:AK057516
EMBL:AK095462 EMBL:AY358269 EMBL:AF435956 EMBL:AC009229
EMBL:AC016689 EMBL:BC024243 EMBL:AH011736 EMBL:BR000689
EMBL:BR000692 IPI:IPI00065438 IPI:IPI00432655 IPI:IPI00845261
IPI:IPI00916110 RefSeq:NP_001164262.1 RefSeq:NP_001164263.1
RefSeq:NP_001164264.1 RefSeq:NP_653314.2 UniGene:Hs.591566
ProteinModelPortal:Q96LZ7 SMR:Q96LZ7 IntAct:Q96LZ7 STRING:Q96LZ7
PhosphoSite:Q96LZ7 DMDM:147643051 PaxDb:Q96LZ7 PRIDE:Q96LZ7
DNASU:151393 Ensembl:ENST00000234195 Ensembl:ENST00000354545
Ensembl:ENST00000406384 Ensembl:ENST00000407257
Ensembl:ENST00000417700 GeneID:151393 KEGG:hsa:151393
UCSC:uc002rqk.1 UCSC:uc002rql.3 UCSC:uc002rqm.3 UCSC:uc002rqn.2
GeneCards:GC02P038150 HGNC:HGNC:26567 HPA:HPA034706 MIM:611872
neXtProt:NX_Q96LZ7 PharmGKB:PA162387925 GenomeRNAi:151393
NextBio:86687 ArrayExpress:Q96LZ7 Bgee:Q96LZ7 CleanEx:HS_FAM82A1
Genevestigator:Q96LZ7 Uniprot:Q96LZ7
Length = 410
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 61/200 (30%), Positives = 111/200 (55%)
Query: 51 YNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110
+ L + K ++ + ++R A+A +Y++ +K+ Y G +++A+ AP
Sbjct: 200 FELLRDHKEKFRDEIEFMWRFARAYGDMYELSTNTQEKK---HYANIGKTLSERAINRAP 256
Query: 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEI 170
N + WY + G +F+ L+ KI G +F++ ++ AI++ P++ LY LKGRY Y +
Sbjct: 257 MNGHCHLWYAVLCGYVSEFEGLQNKINYGHLFKEHLDIAIKLLPEEPFLYYLKGRYCYTV 316
Query: 171 SKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAK 230
SKLS+ E+K+A + + T ++A+ N LKAEEL P N + +AKCY + E
Sbjct: 317 SKLSWIEKKMAATLFGKIPSSTVQEALHNFLKAEELCPGYSNPNYMYLAKCYTDLEENQN 376
Query: 231 AVQWLDKAKAIPVVSYESHD 250
A+++ + A +P V+ E +
Sbjct: 377 ALKFCNLALLLPTVTKEDKE 396
>MGI|MGI:1913552 [details] [associations]
symbol:Rmdn1 "regulator of microtubule dynamics 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001440
InterPro:IPR011990 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
MGI:MGI:1913552 GO:GO:0005739 Gene3D:1.25.40.10 GO:GO:0000922
GO:GO:0005874 CTD:51115 eggNOG:NOG70879
GeneTree:ENSGT00530000063162 HOGENOM:HOG000256907
HOVERGEN:HBG080276 OrthoDB:EOG46DM3V OMA:NAYVIKE EMBL:AK002442
EMBL:AK010421 EMBL:AK029446 EMBL:AL683894 EMBL:BC025158
EMBL:BC096046 EMBL:BR000693 IPI:IPI00387249 RefSeq:NP_079752.3
UniGene:Mm.440686 ProteinModelPortal:Q9DCV4 SMR:Q9DCV4
PhosphoSite:Q9DCV4 PaxDb:Q9DCV4 PRIDE:Q9DCV4
Ensembl:ENSMUST00000029888 GeneID:66302 KEGG:mmu:66302
UCSC:uc008sca.2 InParanoid:Q9DCV4 NextBio:321257 Bgee:Q9DCV4
CleanEx:MM_2410005O16RIK Genevestigator:Q9DCV4
GermOnline:ENSMUSG00000028229 Uniprot:Q9DCV4
Length = 305
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 64/204 (31%), Positives = 112/204 (54%)
Query: 51 YNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYIL-QGIEYAKKAMELA 109
Y L ++ K+ D ++L+RLA+A DI + E +K ++ + ++YAK+A+E
Sbjct: 98 YQLLIQY--KESEDGELLWRLARASR---DIAQLSKTSEEEKKVLVYEALDYAKRALEKK 152
Query: 110 PNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYE 169
++S KWY IC+ G ++ +K KI V ++ KAI++ PKD T L G + Y
Sbjct: 153 ESSSAAHKWYAICISDVGDYEGIKVKIANAYVIKEHFEKAIELNPKDATSIHLMGIWCYT 212
Query: 170 ISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYA 229
+++ +++R+IA ++ ++ T E+A+ KAEE+ P + +N LL+ K Y++
Sbjct: 213 FAEMPWYQRRIAKVLFANPPSSTYEEALRYFHKAEEVDPNFYSKNLLLLGKTYLKLNNKK 272
Query: 230 KAVQWLDKAKAIPVVSYESHDLST 253
A WL KAK P + E + T
Sbjct: 273 LAAFWLVKAKGYPAHTEEDKQIQT 296
>UNIPROTKB|Q32KL4 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9913 "Bos taurus" [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR011990 PROSITE:PS50005 PROSITE:PS50293 GO:GO:0005737
Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874 EMBL:BC110037
IPI:IPI00704781 RefSeq:NP_001032689.1 UniGene:Bt.55894
ProteinModelPortal:Q32KL4 PRIDE:Q32KL4 Ensembl:ENSBTAT00000020889
GeneID:513788 KEGG:bta:513788 CTD:51115 eggNOG:NOG70879
GeneTree:ENSGT00530000063162 HOGENOM:HOG000256907
HOVERGEN:HBG080276 InParanoid:Q32KL4 OMA:KNESSCA OrthoDB:EOG46DM3V
NextBio:20871031 ArrayExpress:Q32KL4 Uniprot:Q32KL4
Length = 317
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 59/195 (30%), Positives = 109/195 (55%)
Query: 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYIL-QGIEYAKKAMELAPNNSNTQKW 118
K+ D ++L+RLA+A D+ + E +K+++ + +EYAK+A+E ++ KW
Sbjct: 113 KESEDAELLWRLARASR---DVAQLSGTSEEEKKFLVYEALEYAKRALEKNESSCAAHKW 169
Query: 119 YGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFER 178
Y IC+G G ++ +K KI + ++ KAI++ PKD T L G + Y ++++ +++R
Sbjct: 170 YAICIGDVGDYEGIKAKIANAYIIKEHFEKAIELNPKDATSIHLMGIWCYTVAEMPWYQR 229
Query: 179 KIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKA 238
+IA ++ + T E+A+ +AE++ P + +N LL+ K Y++ A WL KA
Sbjct: 230 RIAKVLFATPPGSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLTKA 289
Query: 239 KAIPVVSYESHDLST 253
K P + E + T
Sbjct: 290 KDYPAHTEEDKQIQT 304
>UNIPROTKB|F1P0I6 [details] [associations]
symbol:FAM82A2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] InterPro:IPR011990 GO:GO:0005741 GO:GO:0006874
Gene3D:1.25.40.10 GeneTree:ENSGT00530000063162 OMA:FPFARER
EMBL:AADN02040043 IPI:IPI00818795 Ensembl:ENSGALT00000040424
Uniprot:F1P0I6
Length = 478
Score = 286 (105.7 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 64/196 (32%), Positives = 110/196 (56%)
Query: 57 LNNK--QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN 114
LNNK + D L+RLA+A +YDI ++K++ Y G E + A + ++
Sbjct: 272 LNNKLAYADQGDFLWRLARAHSDMYDITEDTDEKKS---YASDGKEELEIAFQKWDQSAE 328
Query: 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174
+WY I G + +S++++I+ G +F++ ++KAI + P+D Y L GR+ Y++S L
Sbjct: 329 CHQWYAILCGQLAEHESIQKRIQTGYIFKEHIDKAIALKPEDPKSYYLLGRWCYQVSHLG 388
Query: 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQW 234
+ E+K A + T +DA+ N LK EEL+P K ++ IAKCY + G + A+ W
Sbjct: 389 WLEKKTASALFETPPTATVQDALQNFLKVEELSPGFSKAVRMYIAKCYKDMGNNSAALLW 448
Query: 235 LDKAKAIPVVSYESHD 250
++ A +PV + E +
Sbjct: 449 MNLASELPVNTKEDSE 464
>RGD|1308697 [details] [associations]
symbol:Rmdn3 "regulator of microtubule dynamics 3" species:10116
"Rattus norvegicus" [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006874 "cellular calcium ion homeostasis" evidence=ISO;ISS]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR011990 RGD:1308697 GO:GO:0016021
GO:GO:0005634 GO:GO:0006915 GO:GO:0030154 GO:GO:0005741
GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00530000063162 eggNOG:NOG84960 HOGENOM:HOG000015374
HOVERGEN:HBG072518 CTD:55177 OMA:FPFARER OrthoDB:EOG4PG61R
EMBL:BC082081 IPI:IPI00471759 RefSeq:NP_001014068.1
UniGene:Rn.18772 ProteinModelPortal:Q66H15 PhosphoSite:Q66H15
PRIDE:Q66H15 Ensembl:ENSRNOT00000016356 GeneID:311328
KEGG:rno:311328 UCSC:RGD:1308697 InParanoid:Q66H15 NextBio:663337
Genevestigator:Q66H15 Uniprot:Q66H15
Length = 471
Score = 284 (105.0 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 62/193 (32%), Positives = 114/193 (59%)
Query: 57 LNNKQP--NDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN 114
LNNK + D L+RLA+A + ++ E++K++ Y L G E A+ A++ ++
Sbjct: 265 LNNKLAYGSRQDFLWRLARAYSDMTELTEEESEKKS---YALNGKEEAEAALKKGDESAA 321
Query: 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174
+ WY + G + + + ++I+ G F++ ++KAI++ P+D + L GR+ Y++S LS
Sbjct: 322 SHLWYAVLCGQLAEHEGISKRIQSGFSFKEHVDKAIELQPEDPRGHFLLGRWCYQVSHLS 381
Query: 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQW 234
+ E+K A + T +DA+ + LKAEEL P K ++ I+KCY E G+ ++A +W
Sbjct: 382 WLEKKTATALFESPLSATVQDALQSFLKAEELQPGFSKAGRVYISKCYRELGKNSEARKW 441
Query: 235 LDKAKAIPVVSYE 247
L+ A+ +P ++ E
Sbjct: 442 LNLAQELPNITNE 454
>UNIPROTKB|F1NBF8 [details] [associations]
symbol:FAM82B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] InterPro:IPR011990
GO:GO:0005739 Gene3D:1.25.40.10 GeneTree:ENSGT00530000063162
OMA:NAYVIKE EMBL:AADN02024796 IPI:IPI00820262
Ensembl:ENSGALT00000036639 Uniprot:F1NBF8
Length = 264
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 62/197 (31%), Positives = 103/197 (52%)
Query: 51 YNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110
Y L ++ N+ D ++L+RLA+A L + +++ Y +EYAK+A+E
Sbjct: 55 YQLLVQHKNRTSEDAELLWRLARASRDLAQLSITSAEEKRQLAY--DSLEYAKRALEKNE 112
Query: 111 NNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEI 170
NS KWY IC+ G ++ +K KI V ++ +AI++ PKD T L G + Y
Sbjct: 113 ANSAAHKWYAICLSDVGDYEGIKVKIGNAFVIKEHFERAIELNPKDATSVHLMGVWCYSF 172
Query: 171 SKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAK 230
++L +++RKIA ++ + T E+A+ AEE P + +N L + K Y++
Sbjct: 173 AELPWYQRKIAAMLFATPPTSTYEEALRYFHMAEEADPNFYSKNLLFLGKTYLKLNNKKM 232
Query: 231 AVQWLDKAKAIPVVSYE 247
A+ WL KAK P + E
Sbjct: 233 ALLWLSKAKEYPAHTEE 249
>RGD|1563085 [details] [associations]
symbol:Rmdn1 "regulator of microtubule dynamics 1" species:10116
"Rattus norvegicus" [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005874 "microtubule"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990 Pfam:PF00515
PROSITE:PS50005 PROSITE:PS50293 RGD:1563085 GO:GO:0005739
Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874 CTD:51115
eggNOG:NOG70879 GeneTree:ENSGT00530000063162 HOGENOM:HOG000256907
HOVERGEN:HBG080276 OrthoDB:EOG46DM3V OMA:NAYVIKE EMBL:BC098713
IPI:IPI00369006 RefSeq:NP_001026833.1 UniGene:Rn.205878
ProteinModelPortal:Q4G069 PhosphoSite:Q4G069 PRIDE:Q4G069
Ensembl:ENSRNOT00000036050 GeneID:500419 KEGG:rno:500419
UCSC:RGD:1563085 InParanoid:Q4G069 NextBio:706151
Genevestigator:Q4G069 Uniprot:Q4G069
Length = 310
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 62/195 (31%), Positives = 108/195 (55%)
Query: 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYIL-QGIEYAKKAMELAPNNSNTQKW 118
K+ D ++L+RLA+A DI + E +K +L + +EYAK+A+E ++ KW
Sbjct: 110 KESEDVELLWRLARASR---DIAQLCKTSEEEKKVLLYEALEYAKRALEKKGSSFAAHKW 166
Query: 119 YGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFER 178
Y IC+ G ++ +K KI V ++ KAI++ PKD T L G + Y +++ +++R
Sbjct: 167 YAICISDVGDYEGIKVKIANAYVIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQR 226
Query: 179 KIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKA 238
+IA ++ ++ T E+A+ +AEE+ P + +N LL+ K Y++ A WL KA
Sbjct: 227 RIAEVLFANPPSSTYEEALKYFHRAEEVDPNFYSKNLLLLGKTYLKLNNKKLAAFWLVKA 286
Query: 239 KAIPVVSYESHDLST 253
K+ P + E + T
Sbjct: 287 KSYPAHTEEDKQIQT 301
>UNIPROTKB|Q5R6Z1 [details] [associations]
symbol:RMDN3 "Regulator of microtubule dynamics protein 3"
species:9601 "Pongo abelii" [GO:0005741 "mitochondrial outer
membrane" evidence=ISS] [GO:0006874 "cellular calcium ion
homeostasis" evidence=ISS] InterPro:IPR011990 GO:GO:0016021
GO:GO:0005634 GO:GO:0006915 GO:GO:0030154 GO:GO:0005741
GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00530000063162 HOVERGEN:HBG072518 CTD:55177
OMA:FPFARER OrthoDB:EOG4PG61R EMBL:CR859250 EMBL:CR860332
RefSeq:NP_001125839.1 UniGene:Pab.18766 ProteinModelPortal:Q5R6Z1
Ensembl:ENSPPYT00000007498 GeneID:100172768 KEGG:pon:100172768
InParanoid:Q5R6Z1 Uniprot:Q5R6Z1
Length = 470
Score = 282 (104.3 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 64/193 (33%), Positives = 111/193 (57%)
Query: 57 LNNK--QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN 114
LNNK + D L+RLA+A + ++ ++K++ Y L G E A+ A+E +++
Sbjct: 264 LNNKLVYGSRQDFLWRLARAYSDMCELTEEVSEKKS---YALDGKEEAEAALEKGDESAD 320
Query: 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174
WY + G + +S++ +I+ G F++ ++KAI + P++ Y L GR+ Y++S LS
Sbjct: 321 CHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQPENPMAYFLLGRWCYQVSHLS 380
Query: 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQW 234
+ E+K A ++ T EDA+ + LKAEEL P K ++ I+KCY E G+ ++A W
Sbjct: 381 WLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAGRVYISKCYRELGKNSEARWW 440
Query: 235 LDKAKAIPVVSYE 247
+ A +P V+ E
Sbjct: 441 MKLALELPDVTKE 453
>UNIPROTKB|F1RXD4 [details] [associations]
symbol:FAM82B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR011990 GO:GO:0005739
Gene3D:1.25.40.10 GeneTree:ENSGT00530000063162 OMA:NAYVIKE
EMBL:CU462951 Ensembl:ENSSSCT00000006729 Uniprot:F1RXD4
Length = 317
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 59/195 (30%), Positives = 106/195 (54%)
Query: 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYIL-QGIEYAKKAMELAPNNSNTQKW 118
K+ D ++L+RLA+A DI + E +K ++ + +EYAK+A+E ++ KW
Sbjct: 113 KESEDAELLWRLARASR---DIAQLSGTSEEEKKLLVYEALEYAKRALEKNESSFAAHKW 169
Query: 119 YGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFER 178
Y IC+ G ++ +K KI + ++ KAI++ PKD T L G + Y +++ +++R
Sbjct: 170 YAICISDVGDYEGIKAKIANAYIIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQR 229
Query: 179 KIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKA 238
+IA ++ + T E+A+ +AE++ P + +N LL+ K Y++ A WL KA
Sbjct: 230 RIAKMLFAAPPSSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLTKA 289
Query: 239 KAIPVVSYESHDLST 253
K P + E + T
Sbjct: 290 KDYPAHTEEDKQVQT 304
>UNIPROTKB|Q96TC7 [details] [associations]
symbol:RMDN3 "Regulator of microtubule dynamics protein 3"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005741 "mitochondrial outer membrane" evidence=IDA]
[GO:0006874 "cellular calcium ion homeostasis" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR011990
GO:GO:0016021 GO:GO:0005634 GO:GO:0006915 GO:GO:0030154
GO:GO:0005741 GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922
GO:GO:0005874 EMBL:CH471125 eggNOG:NOG84960 HOVERGEN:HBG072518
CTD:55177 OMA:FPFARER OrthoDB:EOG4PG61R EMBL:AB000782 EMBL:AY358793
EMBL:AK001441 EMBL:AK025963 EMBL:AK092058 EMBL:AK123282
EMBL:AK123192 EMBL:BC008970 EMBL:BC063844 EMBL:AJ242719
EMBL:BR000691 IPI:IPI00410079 IPI:IPI00845345 RefSeq:NP_060615.1
UniGene:Hs.511067 ProteinModelPortal:Q96TC7 SMR:Q96TC7
IntAct:Q96TC7 MINT:MINT-1631442 STRING:Q96TC7 PhosphoSite:Q96TC7
DMDM:147643203 PaxDb:Q96TC7 PeptideAtlas:Q96TC7 PRIDE:Q96TC7
DNASU:55177 Ensembl:ENST00000260385 Ensembl:ENST00000338376
GeneID:55177 KEGG:hsa:55177 UCSC:uc001zmo.1 GeneCards:GC15M041028
HGNC:HGNC:25550 HPA:HPA009975 MIM:611873 neXtProt:NX_Q96TC7
PharmGKB:PA162387926 InParanoid:Q96TC7 PhylomeDB:Q96TC7
ChiTaRS:FAM82A2 GenomeRNAi:55177 NextBio:58979 ArrayExpress:Q96TC7
Bgee:Q96TC7 CleanEx:HS_FAM82A2 Genevestigator:Q96TC7 Uniprot:Q96TC7
Length = 470
Score = 277 (102.6 bits), Expect = 9.2e-24, P = 9.2e-24
Identities = 63/193 (32%), Positives = 111/193 (57%)
Query: 57 LNNK--QPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN 114
LNNK + D L+RLA+A + ++ ++K++ Y L G E A+ A+E +++
Sbjct: 264 LNNKLVYGSRQDFLWRLARAYSDMCELTEEVSEKKS---YALDGKEEAEAALEKGDESAD 320
Query: 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174
WY + G + +S++ +I+ G F++ ++KAI + P++ + L GR+ Y++S LS
Sbjct: 321 CHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQPENPMAHFLLGRWCYQVSHLS 380
Query: 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQW 234
+ E+K A ++ T EDA+ + LKAEEL P K ++ I+KCY E G+ ++A W
Sbjct: 381 WLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAGRVYISKCYRELGKNSEARWW 440
Query: 235 LDKAKAIPVVSYE 247
+ A +P V+ E
Sbjct: 441 MKLALELPDVTKE 453
>MGI|MGI:1915059 [details] [associations]
symbol:Rmdn3 "regulator of microtubule dynamics 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005741 "mitochondrial outer membrane" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR011990 MGI:MGI:1915059 GO:GO:0016021
GO:GO:0005634 GO:GO:0006915 GO:GO:0030154 GO:GO:0005741
GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874
EMBL:AL772264 GeneTree:ENSGT00530000063162 eggNOG:NOG84960
HOGENOM:HOG000015374 HOVERGEN:HBG072518 CTD:55177 OMA:FPFARER
OrthoDB:EOG4PG61R EMBL:AK146299 EMBL:AK151090 EMBL:AK153369
EMBL:AK153322 EMBL:BC055754 EMBL:BC061186 EMBL:BR000695
IPI:IPI00678532 RefSeq:NP_001028308.1 UniGene:Mm.475909
ProteinModelPortal:Q3UJU9 SMR:Q3UJU9 IntAct:Q3UJU9 STRING:Q3UJU9
PhosphoSite:Q3UJU9 PaxDb:Q3UJU9 PRIDE:Q3UJU9
Ensembl:ENSMUST00000094695 GeneID:67809 KEGG:mmu:67809
UCSC:uc008lte.2 InParanoid:Q3UJU9 NextBio:325611 Bgee:Q3UJU9
CleanEx:MM_1200015F23RIK Genevestigator:Q3UJU9 Uniprot:Q3UJU9
Length = 470
Score = 277 (102.6 bits), Expect = 9.2e-24, P = 9.2e-24
Identities = 62/193 (32%), Positives = 111/193 (57%)
Query: 57 LNNKQP--NDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSN 114
LNNK + D L+RLA+A + D+ E+ K++ Y L G E A+ A++ ++
Sbjct: 265 LNNKLAYGSRQDFLWRLARAYSDMSDLTEEESGKKS---YALNGKEEAEAALKKGDESAA 321
Query: 115 TQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLS 174
WY + G + + + ++I+ G F++ ++KAI++ P+D + L GR+ Y++S L+
Sbjct: 322 CHLWYAVLCGQLAEHEGISKRIQSGFSFKEHVDKAIELQPEDPRGHFLLGRWCYQVSHLN 381
Query: 175 FFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQW 234
+ E+K A + T +DA+ + LKAEEL P K ++ I+KCY E G+ ++A +W
Sbjct: 382 WLEKKTATALFESPLSATVQDALQSFLKAEELQPGFSKAGRVYISKCYRELGKNSEARKW 441
Query: 235 LDKAKAIPVVSYE 247
+ A+ +P V+ E
Sbjct: 442 MKLAQELPDVTNE 454
>UNIPROTKB|Q1JQC5 [details] [associations]
symbol:RMDN3 "Regulator of microtubule dynamics protein 3"
species:9913 "Bos taurus" [GO:0005741 "mitochondrial outer
membrane" evidence=ISS] [GO:0006874 "cellular calcium ion
homeostasis" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] InterPro:IPR011990
GO:GO:0016021 GO:GO:0005634 GO:GO:0006915 GO:GO:0030154
GO:GO:0005741 GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922
GO:GO:0005874 GeneTree:ENSGT00530000063162 eggNOG:NOG84960
HOGENOM:HOG000015374 HOVERGEN:HBG072518 EMBL:BC116057
IPI:IPI00698367 RefSeq:NP_001069147.1 UniGene:Bt.22185
Ensembl:ENSBTAT00000003795 GeneID:514748 KEGG:bta:514748 CTD:55177
InParanoid:Q1JQC5 OMA:FPFARER OrthoDB:EOG4PG61R NextBio:20871490
Uniprot:Q1JQC5
Length = 471
Score = 277 (102.6 bits), Expect = 9.3e-24, P = 9.3e-24
Identities = 66/195 (33%), Positives = 110/195 (56%)
Query: 57 LNNK--QPNDPDVLYRLAKACHCLYDIKRRENDKEASEK--YILQGIEYAKKAMELAPNN 112
LNNK + D L+RLA+A + ++ +EASEK Y L G E A+ A+E N
Sbjct: 265 LNNKLVHGSRQDFLWRLARAYSDMCELT-----EEASEKRSYALSGKEEAEVALEKGNEN 319
Query: 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISK 172
+ +WY + G + + ++ +I+ G F++ ++KAI + P++ + L GR+ Y++S
Sbjct: 320 AECHQWYAVLCGQLAEHEGIQRRIQSGFSFKEHVDKAIALKPENPMAHFLLGRWCYQVSH 379
Query: 173 LSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAV 232
LS+ E+K A + T +DA+++ LKAEEL P K ++ I KCY E G+ +A
Sbjct: 380 LSWLEKKTATALSESPLGATVQDALSSFLKAEELQPGFSKAGRIYICKCYKELGKNPEAK 439
Query: 233 QWLDKAKAIPVVSYE 247
+W+ A +P V+ E
Sbjct: 440 EWMKLALELPNVTKE 454
>UNIPROTKB|H0YMB1 [details] [associations]
symbol:RMDN3 "Regulator of microtubule dynamics protein 3"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011990 GO:GO:0005739 Gene3D:1.25.40.10
EMBL:AC012476 HGNC:HGNC:25550 ChiTaRS:FAM82A2
Ensembl:ENST00000558232 Uniprot:H0YMB1
Length = 306
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 59/182 (32%), Positives = 106/182 (58%)
Query: 66 DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGA 125
D L+RLA+A + ++ ++K++ Y L G E A+ A+E +++ WY + G
Sbjct: 111 DFLWRLARAYSDMCELTEEVSEKKS---YALDGKEEAEAALEKGDESADCHLWYAVLCGQ 167
Query: 126 NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIV 185
+ +S++ +I+ G F++ ++KAI + P++ + L GR+ Y++S LS+ E+K A ++
Sbjct: 168 LAEHESIQRRIQSGFSFKEHVDKAIALQPENPMAHFLLGRWCYQVSHLSWLEKKTATALL 227
Query: 186 SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245
T EDA+ + LKAEEL P K ++ I+KCY E G+ ++A W+ A +P V+
Sbjct: 228 ESPLSATVEDALQSFLKAEELQPGFSKAGRVYISKCYRELGKNSEARWWMKLALELPDVT 287
Query: 246 YE 247
E
Sbjct: 288 KE 289
>UNIPROTKB|Q96DB5 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR011990 PROSITE:PS50005 PROSITE:PS50293 GO:GO:0005739
GO:GO:0005813 Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874
CTD:51115 eggNOG:NOG70879 HOGENOM:HOG000256907 HOVERGEN:HBG080276
EMBL:AF151848 EMBL:BC009671 EMBL:BR000690 IPI:IPI00329696
RefSeq:NP_057117.2 UniGene:Hs.145386 ProteinModelPortal:Q96DB5
SMR:Q96DB5 IntAct:Q96DB5 STRING:Q96DB5 PhosphoSite:Q96DB5
DMDM:73620898 PaxDb:Q96DB5 PRIDE:Q96DB5 DNASU:51115
Ensembl:ENST00000406452 GeneID:51115 KEGG:hsa:51115 UCSC:uc003ydu.3
GeneCards:GC08M087484 HGNC:HGNC:24285 HPA:HPA026495 MIM:611871
neXtProt:NX_Q96DB5 PharmGKB:PA142671849 InParanoid:Q96DB5
OMA:NAYVIKE PhylomeDB:Q96DB5 ChiTaRS:FAM82B GenomeRNAi:51115
NextBio:53881 ArrayExpress:Q96DB5 Bgee:Q96DB5 CleanEx:HS_FAM82B
Genevestigator:Q96DB5 GermOnline:ENSG00000176623 Uniprot:Q96DB5
Length = 314
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 57/194 (29%), Positives = 105/194 (54%)
Query: 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWY 119
K+ D ++L+RLA+A + + R +E + + + +EYAK+A+E ++ + KWY
Sbjct: 110 KESEDAELLWRLARASRDVAQLSR--TSEEEKKLLVYEALEYAKRALEKNESSFASHKWY 167
Query: 120 GICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERK 179
IC+ G ++ +K KI + ++ KAI++ PKD T L G + Y +++ +++R+
Sbjct: 168 AICLSDVGDYEGIKAKIANAYIIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRR 227
Query: 180 IAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAK 239
IA ++ + T E A+ +AE++ P + +N LL+ K Y++ A WL KAK
Sbjct: 228 IAKMLFATPPSSTYEKALGYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLMKAK 287
Query: 240 AIPVVSYESHDLST 253
P + E + T
Sbjct: 288 DYPAHTEEDKQIQT 301
>WB|WBGene00011501 [details] [associations]
symbol:rmd-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR011990
GO:GO:0009792 GO:GO:0005737 GO:GO:0006915 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 GO:GO:0048477 Gene3D:1.25.40.10
GO:GO:0000922 GO:GO:0005874 EMBL:Z27079
GeneTree:ENSGT00530000063162 PIR:S41007 RefSeq:NP_001255029.1
RefSeq:NP_001255030.1 ProteinModelPortal:P34560 STRING:P34560
PaxDb:P34560 GeneID:176379 KEGG:cel:CELE_T05G5.7 CTD:176379
WormBase:T05G5.7a WormBase:T05G5.7b eggNOG:NOG84960
HOGENOM:HOG000017278 InParanoid:P34560 OMA:DWIENLL NextBio:892324
Uniprot:P34560
Length = 226
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 60/180 (33%), Positives = 99/180 (55%)
Query: 66 DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGA 125
D+L+R+ + CH L E + K +++G +Y +AM+L P++ KW I G
Sbjct: 35 DLLWRMCRFCHELSTTMSGEQRR----KMLIEGRDYGLEAMDLDPSSFLAAKWTAIMFGL 90
Query: 126 NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIV 185
KEKI G +D ++KA+++ P DF L L+ R+ Y I+ LS+ ERK A ++
Sbjct: 91 VVDQLPTKEKINDGGRLKDMLDKALELDPTDFALLHLRARFSYTIANLSWLERKAASMLY 150
Query: 186 SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245
S++ + T +DA+ + KA A W EN L ++KC++ E +A + L+KA +P S
Sbjct: 151 SEVPKATIDDALVD-FKAAYNQNADWIENLLFLSKCHLAKKEKQQAREMLNKAIVLPAAS 209
>UNIPROTKB|F1SSS8 [details] [associations]
symbol:FAM82A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] InterPro:IPR011990 GO:GO:0005741 GO:GO:0006874
Gene3D:1.25.40.10 GeneTree:ENSGT00530000063162 OMA:FPFARER
EMBL:CU633257 Ensembl:ENSSSCT00000005264 Uniprot:F1SSS8
Length = 472
Score = 263 (97.6 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/184 (31%), Positives = 107/184 (58%)
Query: 66 DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGA 125
D L+RLA+A + ++ ++K++ + L G E A+ A+E N+ + +WY + G
Sbjct: 275 DFLWRLARAYSDMCELAEEASEKKS---HALSGKEAAEAALEKGDENAESHQWYAVLCGQ 331
Query: 126 NGQFQSLKEKIKCGVVF--RDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVL 183
+ +S++++I+ G + ++ ++KAI + P++ + L GR+ Y++S LS+ E+K A
Sbjct: 332 LAEHESIQKRIQSGFISPPQEHVDKAIALQPENPMTHFLLGRWCYQVSHLSWLEKKTATA 391
Query: 184 IVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPV 243
+ T +DA+ + LKAEEL P K ++ I+KCY E G+ +A QW+ A +P
Sbjct: 392 LSESPLSATVQDALQSFLKAEELKPGFSKAGRIYISKCYRELGKNPEAKQWVKLALELPD 451
Query: 244 VSYE 247
V+ E
Sbjct: 452 VTKE 455
>ZFIN|ZDB-GENE-070928-17 [details] [associations]
symbol:zgc:171674 "zgc:171674" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
ZFIN:ZDB-GENE-070928-17 Gene3D:1.25.40.10
GeneTree:ENSGT00530000063162 OMA:NAYVIKE EMBL:FP102273
IPI:IPI00868415 Ensembl:ENSDART00000112680 ArrayExpress:F1R0C4
Bgee:F1R0C4 Uniprot:F1R0C4
Length = 295
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 59 NKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKW 118
++ D + L+RLA+ C L + E + + Y + +YA A++ KW
Sbjct: 94 HRDSGDAEFLWRLARVCRDLALLSSAEEKRRLT--Y--EAFQYATAALQRDEQCYAAHKW 149
Query: 119 YGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFER 178
+ IC+ G ++ +K KI + R+ + +AIQ+ P+D T + G + + ++L +++R
Sbjct: 150 FAICLSDVGDYEGIKVKIGNSYIIREHLERAIQLNPRDATSIHILGFWCFAFAELPWYQR 209
Query: 179 KIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKA 238
K+A +I T E+A+ L+AEE+ P+ + +N L++ K Y+ + +A WL KA
Sbjct: 210 KVAAVIFGSPPTATYEEALEFFLRAEEVEPSFYSKNLLMLGKTYMMLRDVQQAALWLTKA 269
Query: 239 KAIPVVSYESHDL 251
+ P V+ E +
Sbjct: 270 RDYPAVTEEDRQV 282
>WB|WBGene00007786 [details] [associations]
symbol:rmd-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0071688
"striated muscle myosin thick filament assembly" evidence=IMP]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 GO:GO:0071688 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 GeneTree:ENSGT00530000063162
HOGENOM:HOG000017278 EMBL:Z81042 UniGene:Cel.4644 GeneID:179391
KEGG:cel:CELE_C27H6.4 UCSC:C27H6.4c.1 CTD:179391 NextBio:905196
RefSeq:NP_741608.2 ProteinModelPortal:Q8MQB5 SMR:Q8MQB5
STRING:Q8MQB5 PRIDE:Q8MQB5 EnsemblMetazoa:C27H6.4b
WormBase:C27H6.4b InParanoid:Q8MQB5 OMA:WIENTVY ArrayExpress:Q8MQB5
Uniprot:Q8MQB5
Length = 378
Score = 245 (91.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 62/188 (32%), Positives = 102/188 (54%)
Query: 66 DVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGA 125
DVL+RLAK C+ + + R E DK + I++G +YA +A NN +W + G
Sbjct: 187 DVLWRLAKFCNEIGN--RVEKDKR--KDIIVEGKKYATEAWNTDSNNFLAARWAALMSGK 242
Query: 126 NGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIV 185
++ KEKI+ G ++ +++AI + PK+ L L+GR+ ++ LS+FERK A L+
Sbjct: 243 VTEYLGTKEKIEEGKHCKEYLDRAISIQPKEDALLHLRGRWALSVANLSWFERKAAALLY 302
Query: 186 SDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVS 245
S+ T E+AIA+ A E+ P W EN + + K + G+ A A + ++A I +
Sbjct: 303 SEPPTATVEEAIADFQAAHEINP-DWIENTVYLGKALHQKGDKAAAKPFFEQALKITPTN 361
Query: 246 YESHDLST 253
+L T
Sbjct: 362 DNEKELLT 369
>UNIPROTKB|E5RH53 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR011990 GO:GO:0005813 Gene3D:1.25.40.10 HGNC:HGNC:24285
ChiTaRS:FAM82B EMBL:AC103817 IPI:IPI00977210
ProteinModelPortal:E5RH53 SMR:E5RH53 PRIDE:E5RH53
Ensembl:ENST00000523911 ArrayExpress:E5RH53 Bgee:E5RH53
Uniprot:E5RH53
Length = 248
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 53/197 (26%), Positives = 97/197 (49%)
Query: 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWY 119
K+ D ++L+RLA+A + + R +E + + + +EYAK+A+E ++ + KWY
Sbjct: 66 KESEDAELLWRLARASRDVAQLSR--TSEEEKKLLVYEALEYAKRALEKNESSFASHKWY 123
Query: 120 GICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERK 179
IC+ G ++ +K KI + ++ KAI++ PKD T L G + Y +++ +++R+
Sbjct: 124 AICLSDVGDYEGIKAKIANAYIIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRR 183
Query: 180 IAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAVQWLDKAK 239
IA ++ + T E A+ +AE+ K Y++ A WL KAK
Sbjct: 184 IAKMLFATPPSSTYEKALGYFHRAEQ-------------GKTYLKLHNKKLAAFWLMKAK 230
Query: 240 AIPVVSYESHDLSTTYS 256
P + E + S
Sbjct: 231 DYPAHTEEDKQVKRNRS 247
>UNIPROTKB|H0YB83 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR011990 GO:GO:0005813 Gene3D:1.25.40.10 HGNC:HGNC:24285
ChiTaRS:FAM82B EMBL:AC103817 Ensembl:ENST00000519789 Uniprot:H0YB83
Length = 225
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 42/146 (28%), Positives = 82/146 (56%)
Query: 60 KQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNNSNTQKWY 119
K+ D ++L+RLA+A + + R +E + + + +EYAK+A+E ++ + KWY
Sbjct: 56 KESEDAELLWRLARASRDVAQLSR--TSEEEKKLLVYEALEYAKRALEKNESSFASHKWY 113
Query: 120 GICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISKLSFFERK 179
IC+ G ++ +K KI + ++ KAI++ PKD T L G + Y +++ +++R+
Sbjct: 114 AICLSDVGDYEGIKAKIANAYIIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRR 173
Query: 180 IAVLIVSDLDEPTAEDAIANCLKAEE 205
IA ++ + T E A+ +AE+
Sbjct: 174 IAKMLFATPPSSTYEKALGYFHRAEQ 199
>DICTYBASE|DDB_G0278793 [details] [associations]
symbol:DDB_G0278793 "Regulator of microtubule
dynamics protein 1" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR011990
InterPro:IPR013026 PROSITE:PS50293 dictyBase:DDB_G0278793
GO:GO:0045335 Gene3D:1.25.40.10 EMBL:AAFI02000024
InterPro:IPR013105 Pfam:PF07719 eggNOG:NOG70879 RefSeq:XP_641966.1
ProteinModelPortal:Q54XR4 EnsemblProtists:DDB0206195 GeneID:8621698
KEGG:ddi:DDB_G0278793 InParanoid:Q54XR4 OMA:AKEFYKI
ProtClustDB:CLSZ2430089 Uniprot:Q54XR4
Length = 229
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 55/189 (29%), Positives = 88/189 (46%)
Query: 53 LTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAPNN 112
L E + + P D ++++RLA++ +D +K+ +K I Q +E KA + PN+
Sbjct: 26 LLTEGHKQYPEDVEIMWRLARS---YFDKNEEVANKDEKKKLIEQALELTNKASTINPNH 82
Query: 113 SNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQYEISK 172
KW I + A G S KEKI +D KA ++ P D T L GR+ + IS
Sbjct: 83 WAVHKWLAILISALGDHISSKEKIANAFKIKDHAVKANELKPNDATTLHLLGRWCFSISS 142
Query: 173 LSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEYAKAV 232
+ + ER A + T ++A+ L+A + P + N L Y + AKA
Sbjct: 143 IGWIERTAASALFGTPPTSTYDEALTYFLEAYKCDPTNIR-NALFTGDTYAALKDNAKAK 201
Query: 233 QWLDKAKAI 241
++ A AI
Sbjct: 202 EFYKIAAAI 210
>WB|WBGene00009369 [details] [associations]
symbol:F33H2.6 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR011990 InterPro:IPR013026 PROSITE:PS50293
Gene3D:1.25.40.10 GO:GO:0045132 eggNOG:NOG70879
GeneTree:ENSGT00530000063162 EMBL:Z81526 PIR:T21710
RefSeq:NP_493617.2 ProteinModelPortal:O62216 SMR:O62216
DIP:DIP-25382N IntAct:O62216 MINT:MINT-228202 PaxDb:O62216
EnsemblMetazoa:F33H2.6 GeneID:173369 KEGG:cel:CELE_F33H2.6
UCSC:F33H2.6 CTD:173369 WormBase:F33H2.6 HOGENOM:HOG000114941
InParanoid:O62216 OMA:PTTWHIL NextBio:879363 Uniprot:O62216
Length = 301
Score = 192 (72.6 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 49/197 (24%), Positives = 96/197 (48%)
Query: 51 YNLTMELNNKQPNDPDVLYRLAKACHCLYDIKRRENDKEASEKYILQGIEYAKKAMELAP 110
YN+ + N N ++L+RLA+ C + + D+ ++ IL+ KKA++ P
Sbjct: 85 YNILKKFENS--NCSELLWRLARVV-C--EKGKLSKDQNQRKELILEAYGIVKKALDNEP 139
Query: 111 NNS--NTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNKAIQMAPKDFTLYSLKGRYQY 168
N KWY I + G+ + K +I+ R + KA+ + D T + + G + +
Sbjct: 140 KNGCFGAHKWYAILLDYVGEIEGNKSRIEKSFQVRKHLEKALSIFENDPTTWHILGVWHF 199
Query: 169 EISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAPAPWKENQLLIAKCYIEAGEY 228
+ + + R +A I + T ++A+ LKAE+++P + N I + Y + G+
Sbjct: 200 SFANMGYATRMVAKAIFATPPASTYQEALHYFLKAEQISPGFYSTNTYYIGEVYEQLGQK 259
Query: 229 AKAVQWLDKAKAIPVVS 245
A+A+ ++ +PVV+
Sbjct: 260 AEALDAFKQSFKMPVVT 276
>UNIPROTKB|H0YB03 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR011990 GO:GO:0005813 Gene3D:1.25.40.10 HGNC:HGNC:24285
ChiTaRS:FAM82B EMBL:AC103817 Ensembl:ENST00000520719 Bgee:H0YB03
Uniprot:H0YB03
Length = 165
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 89 EASEKYILQGIEYAKKAMELAPNNSNTQKWYGICVGANGQFQSLKEKIKCGVVFRDQMNK 148
E + + + +EYAK+A+E ++ + KWY IC+ G ++ +K KI + ++ K
Sbjct: 1 EEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEK 60
Query: 149 AIQMAPKDFTLYSLKGRYQYEISKLSFFERKIAVLIVSDLDEPTAEDAIANCLKAEELAP 208
AI++ PKD T L G + Y +++ +++R+IA ++ + T E A+ +AE+
Sbjct: 61 AIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQ--- 117
Query: 209 APWKENQLLIAKCYIEAGEYAKAVQWLDKAKAIPVVSYESHDLST 253
K Y++ A WL KAK P + E + T
Sbjct: 118 ----------GKTYLKLHNKKLAAFWLMKAKDYPAHTEEDKQIQT 152
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 259 251 0.00081 114 3 11 22 0.44 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 606 (64 KB)
Total size of DFA: 200 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.12u 0.11s 22.23t Elapsed: 00:00:01
Total cpu time: 22.13u 0.11s 22.24t Elapsed: 00:00:01
Start: Thu Aug 15 16:14:03 2013 End: Thu Aug 15 16:14:04 2013