RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9169
(440 letters)
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 503
Score = 227 bits (578), Expect = 1e-69
Identities = 177/380 (46%), Positives = 238/380 (62%), Gaps = 8/380 (2%)
Query: 10 RKASFKNAGK-SFDEMRRKRCEMNVELRKAHKDDQLFKRRNIDQLDE-----IEEENVTV 63
R+ +FKN G+ S DE+RR+R VELRKA +D+ L KRRN + E+E+
Sbjct: 6 RRTNFKNKGRFSADELRRRRDTQQVELRKAKRDEALAKRRNFIPPTDGADSDEEDESSVS 65
Query: 64 IEPTCMSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICV 123
+ S ++ +P+M + + S + + ++ AT R++LS+E PPID +I+AGVVP V
Sbjct: 66 ADQQFYSQLQQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLV 125
Query: 124 EL-LDDENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWA 182
E +++ Q EA WALTNIASGTS QT V++A+A+P F+QLL + + + EQA WA
Sbjct: 126 EFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWA 185
Query: 183 LGNIAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKI 242
LGN+AGD RD +L M IL L N P+ +R W +SNLCR K P PD+ +
Sbjct: 186 LGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPS-LIRTATWTLSNLCRGKKPQPDWSVV 244
Query: 243 KICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTI 302
LP L +LI++ D ETL D CWA+SY+SDG + IQAV+D + RLVELL E T +
Sbjct: 245 SQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLV 304
Query: 303 LTAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISNITAGNSRQ 362
T ALR VGNI TGND QT VI AG L ++ LLSS + NI KEA WTISNITAGN+ Q
Sbjct: 305 QTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQ 364
Query: 363 IDHVIQEGELNQMALLVEES 382
I VI + + L+E +
Sbjct: 365 IQAVIDANLIPPLVKLLEVA 384
Score = 66.3 bits (160), Expect = 2e-12
Identities = 53/259 (20%), Positives = 104/259 (40%), Gaps = 1/259 (0%)
Query: 148 TSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNI-AGDGARARDLLLGLGTMPQI 206
+++Q +P+ Q L+S + AT I + + D+++ G +P++
Sbjct: 65 SADQQFYSQLQQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRL 124
Query: 207 LALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKICLPLLNQLIHTTDVETLSDICW 266
+ ++ N P WA++N+ + +PL QL++T VE W
Sbjct: 125 VEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIW 184
Query: 267 ALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRTVGNIATGNDHQTDCVIQ 326
AL ++ D V+ + ++ L +S + +++ A T+ N+ G Q D +
Sbjct: 185 ALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVV 244
Query: 327 AGGLQKMKKLLSSSRVNIVKEAAWTISNITAGNSRQIDHVIQEGELNQMALLVEESGGLE 386
+ L + KL+ S + +A W IS ++ G I VI ++ L+ L
Sbjct: 245 SQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLV 304
Query: 387 KLEALQHHENETVYQKCYK 405
+ AL+ N
Sbjct: 305 QTPALRAVGNIVTGNDLQT 323
Score = 53.9 bits (128), Expect = 2e-08
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
Query: 68 CMSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLD 127
+ I + +P+ + + S + A + +I AGV+P LL
Sbjct: 281 IQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLS 340
Query: 128 DENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIA 187
N + EA W ++NI +G +EQ VI+AN IP ++LL ++A WA+ N +
Sbjct: 341 SPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNAS 400
Query: 188 GDGARARD---LLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCR 231
G + D L+ G + + L++ + + A+ N+ +
Sbjct: 401 SGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRI-IEVTLDALENILK 446
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId:
10090]}
Length = 434
Score = 159 bits (403), Expect = 5e-45
Identities = 152/328 (46%), Positives = 218/328 (66%), Gaps = 5/328 (1%)
Query: 69 MSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELL-D 127
+ +V ++++G+ S+N + ++ AT++ARK+LS+E+ PPID +I AG++P V L
Sbjct: 8 QGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGK 67
Query: 128 DENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIA 187
+ QFE+ WALTNIASGTSEQT V++ AIP F+ LL+SPH +++EQA WALGNIA
Sbjct: 68 TDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIA 127
Query: 188 GDGARARDLLLGLGTMPQILALVQ----PNTPTTFLRNIVWAISNLCRNKNPAPDFEKIK 243
GDG+ RDL++ G + +LAL+ +LRN+ W +SNLCRNKNPAP + ++
Sbjct: 128 GDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVE 187
Query: 244 ICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTIL 303
LP L +L+H D E L+D CWA+SY++DG N++I+ VV GVVP+LV+LL + E I+
Sbjct: 188 QILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIV 247
Query: 304 TAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISNITAGNSRQI 363
T ALR +GNI TG D QT VI AG L LL++ + NI KEA WT+SNITAG QI
Sbjct: 248 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQI 307
Query: 364 DHVIQEGELNQMALLVEESGGLEKLEAL 391
V+ G + + ++ ++ + EA
Sbjct: 308 QQVVNHGLVPFLVGVLSKADFKTQKEAA 335
Score = 107 bits (268), Expect = 3e-26
Identities = 79/354 (22%), Positives = 147/354 (41%), Gaps = 15/354 (4%)
Query: 65 EPTCMSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVE 124
E T +P I + S + + A A ++ + D +I+ G + +
Sbjct: 90 EQTKAVVDGGAIPAFISLLASPHAHISEQAVW-ALGNIAGDGSAFRDLVIKHGAIDPLLA 148
Query: 125 LLDDENPNT-----QFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQA 179
LL + +T TW L+N+ + +P ++LL + +
Sbjct: 149 LLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADS 208
Query: 180 TWALGNIAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDF 239
WA+ + ++++ G +PQ++ + T + + AI N+ +
Sbjct: 209 CWAISYLTDGPNERIEMVVKKGVVPQLVK-LLGATELPIVTPALRAIGNIVTGTDEQTQK 267
Query: 240 EKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEE 299
L + L+ + W +S I+ G D+IQ VV+ G+VP LV +L +
Sbjct: 268 VIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKAD 327
Query: 300 TTILTAALRTVGNIAT-GNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISNITAG 358
A + N + G Q ++ G ++ + LLS+ I++ ISNI
Sbjct: 328 FKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNI--- 384
Query: 359 NSRQIDHVIQEGELNQMALLVEESGGLEKLEALQHHENETVYQKCYKIISMAFN 412
+ GE ++++++EE GGL+K+EALQ HENE+VY+ +I F+
Sbjct: 385 ----FQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFS 434
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 116 bits (290), Expect = 4e-29
Identities = 39/327 (11%), Positives = 84/327 (25%), Gaps = 28/327 (8%)
Query: 119 VPICVELLDDENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQ 178
+P V+ L ++ Q + + + V I K + LL SP+ N+ +
Sbjct: 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63
Query: 179 ATWALGNIAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPD 238
A AL N+ + + + ++L++ + + + NL +
Sbjct: 64 AAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE 123
Query: 239 F--------------EKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVD 284
C N D E + L +S +
Sbjct: 124 LIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNY 183
Query: 285 TGVVPRLVELLDSEETTIL--------------TAALRTVGNIATGNDHQTDCVIQAGGL 330
+G++ L+ + + + R + T A
Sbjct: 184 SGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTE 243
Query: 331 QKMKKLLSSSRVNIVKEAAWTISNITAGNSRQIDHVIQEGELNQMALLVEESGGLEKLEA 390
+ S+ ++ N + + + L+ +S LEA
Sbjct: 244 KSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEA 303
Query: 391 LQHHENETVYQKCYKIISMAFNDSAEN 417
K M+ +
Sbjct: 304 CAGALQNLTASKGLMSSGMSQLIGLKE 330
Score = 95.7 bits (236), Expect = 5e-22
Identities = 47/378 (12%), Positives = 109/378 (28%), Gaps = 37/378 (9%)
Query: 74 MTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNT 133
+T+P+ ++ + S + K + I + + ++ + G + V+LL N N
Sbjct: 2 LTIPKAVQYLSSQDEKYQAIGAY-YIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNV 60
Query: 134 QFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSS-PHLNLAEQATWALGNIAGDGAR 192
Q A AL N+ ++ + N I + + LL + + +Q T L N++
Sbjct: 61 QQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL 120
Query: 193 ARDLLLG-------------LGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDF 239
+L+ G + + N + NL
Sbjct: 121 KEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTM 180
Query: 240 EKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDK--------------IQAVVDT 285
+ L + + D + + HN +
Sbjct: 181 RNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNA 240
Query: 286 GVVPRLVELLDSEETTILTAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIV 345
++ ++ N + + + ++ L+ S+ +
Sbjct: 241 YTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT 300
Query: 346 KEAAWTISNITAGNSRQIDHVIQEGELNQMALLVEESGGLEKLEALQHHENETVYQKCYK 405
EA + + + L+ + GL ++ L N V +
Sbjct: 301 LEACAGALQNLTASKGLMSSGMS-------QLIGLKEKGLPQIARLLQSGNSDVVRSGAS 353
Query: 406 IIS-MAFNDSAENSIENG 422
++S M+ + + N
Sbjct: 354 LLSNMSRHPLLHRVMGNQ 371
Score = 64.1 bits (154), Expect = 1e-11
Identities = 41/276 (14%), Positives = 80/276 (28%), Gaps = 20/276 (7%)
Query: 85 SSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWALTNI 144
+ + + +++ ++ + V C+ +L + + E
Sbjct: 174 DAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRY--- 230
Query: 145 ASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGARARDLLLGLGTMP 204
+ NA S+ + + L +
Sbjct: 231 ----RQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIR 286
Query: 205 QILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKI-----CLPLLNQLIHTTDVE 259
L L+ + L A+ NL +K I LP + +L+ + + +
Sbjct: 287 TYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSD 346
Query: 260 TLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEET------TILTAALRTVGNI 313
+ LS +S + + V+ V P + LL S IL++A TV N+
Sbjct: 347 VVRSGASLLSNMS--RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNL 404
Query: 314 ATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAA 349
+ L + L SS EAA
Sbjct: 405 MASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 440
Score = 60.6 bits (145), Expect = 1e-10
Identities = 47/356 (13%), Positives = 103/356 (28%), Gaps = 45/356 (12%)
Query: 85 SSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWALTNI 144
SS +++ A +L+ P + + +P F AT L N+
Sbjct: 115 SSTDELKEELIADALPVLADRVIIPFSGWCDG----NSNMSREVVDPEVFFNATGCLRNL 170
Query: 145 ASGTSEQTMTVINANAIPKFLQLLSS------PHLNLAEQATWALGNIAGDGARARDLLL 198
+S + + + I + + + E L N++
Sbjct: 171 SSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRY 230
Query: 199 GLGTMPQILALVQPNTPTTF--------LRNIVWAISNLCRNKNPAPDFEKIKICLPLLN 250
A + ++ F N + N + LN
Sbjct: 231 RQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLN 290
Query: 251 QLIHTTDVETLSDICWALSYISDGHNDKIQA-----VVDTGVVPRLVELLDSEETTILTA 305
+ + TL AL ++ + +P++ LL S + ++ +
Sbjct: 291 LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRS 350
Query: 306 ALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVN------IVKEAAWTISNITAGN 359
+ N++ V+ ++ +LL+S N I+ A +T+ N+ A
Sbjct: 351 GASLLSNMS--RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ 408
Query: 360 SRQIDHVIQEGELNQMALLVEESGGLEKLEAL-QHHENETVYQKCYKIISMAFNDS 414
Q+A S L + L + + + ++S ++
Sbjct: 409 P-------------QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 451
Score = 53.3 bits (126), Expect = 3e-08
Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 13/171 (7%)
Query: 75 TVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDE-----LIEAGVVPICVELLDDE 129
+ + M S + A A + L+ + ++ +P LL
Sbjct: 284 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG 343
Query: 130 NPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLN------LAEQATWAL 183
N + L+N++ V+ P+ +LL+S N + A + +
Sbjct: 344 NSDVVRSGASLLSNMSR--HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTV 401
Query: 184 GNIAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKN 234
N+ + + I+ L + + +S++ +K
Sbjct: 402 RNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 452
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 264
Score = 78.5 bits (192), Expect = 5e-17
Identities = 36/237 (15%), Positives = 83/237 (35%), Gaps = 7/237 (2%)
Query: 110 IDELIEAGVVPICVELLDDENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFL-QLL 168
++ + P E + + A L ++ + + + + + L
Sbjct: 10 CLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCE-NMDNAADFCQLSGMHLLVGRYL 68
Query: 169 SSPHLNLAEQATWALGNIAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISN 228
+ L +A +G + + A ++ +LGLG + ++L L+ + T ++AIS
Sbjct: 69 EAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISC 128
Query: 229 LCRNKNPAPDFEKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVV 288
L R + +L + + + + L + GH + + G+V
Sbjct: 129 LVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMV 188
Query: 289 PRLVELLDSEETTILTAALRTVGNIATGNDHQTDCVIQAG-----GLQKMKKLLSSS 340
+LV L+ +E + L + ++ T + L+ +LL
Sbjct: 189 QQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHRCQLLQQH 245
Score = 40.8 bits (94), Expect = 2e-04
Identities = 16/125 (12%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
Query: 83 MKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWALT 142
+ + +R+ A + L +E+ + + + + + + + + ++ + L
Sbjct: 111 DRDACDTVRVKALFA-ISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQ 169
Query: 143 NIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGARARDLLLGLGT 202
N+ G E T+ + + + + L+ + H E AL ++ D +
Sbjct: 170 NLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPEL 229
Query: 203 MPQIL 207
+ L
Sbjct: 230 GLEEL 234
Score = 35.4 bits (80), Expect = 0.008
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)
Query: 278 KIQAVVDTGVVPRLVELLDSEETTILTAALRTVGNIATGNDHQTDCVIQAGGLQKM-KKL 336
V+ + P E + + AL + ++ D+ D Q G+ + +
Sbjct: 9 SCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAAD-FCQLSGMHLLVGRY 67
Query: 337 LSSSRVNIVKEAAWTISNITAGNSRQIDHVIQEGELNQM 375
L + + AA I + + + V+ G L ++
Sbjct: 68 LEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKL 106
Score = 32.7 bits (73), Expect = 0.070
Identities = 13/117 (11%), Positives = 31/117 (26%), Gaps = 5/117 (4%)
Query: 66 PTCMSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVEL 125
+ +++ ++ + + + + L L G+V V L
Sbjct: 135 AGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVAL 194
Query: 126 LDDENPNTQFEATWALTNIASGTSEQTMTVINA-----NAIPKFLQLLSSPHLNLAE 177
+ E+ AL ++ + + + QLL E
Sbjct: 195 VRTEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHRCQLLQQHEEYQEE 251
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 69.9 bits (169), Expect = 2e-13
Identities = 38/273 (13%), Positives = 91/273 (33%), Gaps = 4/273 (1%)
Query: 140 ALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGARARDLLLG 199
A+ N+ + Q + AIP+ +LL+ + +A + ++ A ++
Sbjct: 1 AVVNL---INYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRS 57
Query: 200 LGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKICLPLLNQLIHTTDVE 259
+ I+ +Q R + NL ++ K +P L +++ +
Sbjct: 58 PQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGG-IPALVKMLGSPVDS 116
Query: 260 TLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRTVGNIATGNDH 319
L L + AV G + ++V LL+ L + +A GN
Sbjct: 117 VLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQE 176
Query: 320 QTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISNITAGNSRQIDHVIQEGELNQMALLV 379
++ +GG Q + ++ + + + + + S +++ G + + L +
Sbjct: 177 SKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHL 236
Query: 380 EESGGLEKLEALQHHENETVYQKCYKIISMAFN 412
+ L N + + +
Sbjct: 237 TDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLG 269
Score = 69.5 bits (168), Expect = 2e-13
Identities = 38/256 (14%), Positives = 103/256 (40%), Gaps = 3/256 (1%)
Query: 111 DELIEAGVVPICVELLDDENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSS 170
D + +P +LL+DE+ +A + ++ + + + + + ++ + +
Sbjct: 11 DAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQN 70
Query: 171 P-HLNLAEQATWALGNIAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNL 229
+ A L N++ + G +P ++ ++ + L + + NL
Sbjct: 71 TNDVETARCTAGTLHNLSHH-REGLLAIFKSGGIPALVKMLGSPVDSV-LFYAITTLHNL 128
Query: 230 CRNKNPAPDFEKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVP 289
++ A ++ L + L++ T+V+ L+ L ++ G+ + ++ +G
Sbjct: 129 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 188
Query: 290 RLVELLDSEETTILTAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAA 349
LV ++ + L V + + +++AGG+Q + L+ +V+
Sbjct: 189 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 248
Query: 350 WTISNITAGNSRQIDH 365
WT+ N++ ++Q
Sbjct: 249 WTLRNLSDAATKQEGM 264
Score = 68.4 bits (165), Expect = 5e-13
Identities = 36/249 (14%), Positives = 75/249 (30%), Gaps = 23/249 (9%)
Query: 66 PTCMSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVEL 125
+ I+ V ++ + I +E + + +P+ V+L
Sbjct: 304 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 363
Query: 126 LDDENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGN 185
L + +AT L + + AIP+ +QLL H + + +
Sbjct: 364 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 423
Query: 186 IAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKIC 245
V+ + A+ L R+ + +
Sbjct: 424 ---------------------QQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLN-T 461
Query: 246 LPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTA 305
+PL QL+++ L ++ + +A+ G L ELL S + T
Sbjct: 462 IPLFVQLLYSPIENIQRVAAGVLCELAQ-DKEAAEAIEAEGATAPLTELLHSRNEGVATY 520
Query: 306 ALRTVGNIA 314
A + ++
Sbjct: 521 AAAVLFRMS 529
Score = 68.0 bits (164), Expect = 7e-13
Identities = 58/357 (16%), Positives = 131/357 (36%), Gaps = 12/357 (3%)
Query: 23 EMRRKRCEMNVELRKAHKDDQLFKRRNIDQLDEIEEENVTVIEPTCMSPIKMTVPEMIEG 82
E+ + +L +DQ+ + + ++ ++ + + V ++
Sbjct: 13 ELATRAIPELTKLLND--EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQM---VSAIVRT 67
Query: 83 MKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWALT 142
M+++N T LS R + + ++G +P V++L + F A L
Sbjct: 68 MQNTNDVETARCTAGTLHNLSHHR-EGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLH 126
Query: 143 NIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGARARDLLLGLGT 202
N+ M V A + K + LL+ ++ T L +A ++ ++L G
Sbjct: 127 NLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGG 186
Query: 203 MPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKICLPLLNQLIHTTDVETLS 262
++ +++ T L + L + P + L L +
Sbjct: 187 PQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLV-Q 245
Query: 263 DICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRTVGNIATGNDHQTD 322
+ W L +SD + G++ LV+LL S++ ++T A + N+ N
Sbjct: 246 NCLWTLRNLSDAATKQEGM---EGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKM 302
Query: 323 CVIQAGGLQKMKKLL--SSSRVNIVKEAAWTISNITAGNSRQIDHVIQEGELNQMAL 377
V Q GG++ + + + + R +I + A + ++T+ + + +
Sbjct: 303 MVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 359
Score = 58.0 bits (138), Expect = 1e-09
Identities = 53/367 (14%), Positives = 115/367 (31%), Gaps = 44/367 (11%)
Query: 68 CMSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLD 127
+ + P+ + + + +++ T S + ++EAG + L
Sbjct: 178 KLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLT 237
Query: 128 DENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIA 187
D + W L N++ ++Q + +QLL S +N+ A L N+
Sbjct: 238 DPSQRLVQNCLWTLRNLSDAATKQEG---MEGLLGTLVQLLGSDDINVVTCAAGILSNLT 294
Query: 188 GDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKIC-- 245
+ + + ++ +G + ++ V + +++ + + +
Sbjct: 295 CNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLH 354
Query: 246 --LPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDS------ 297
LP++ +L+H L L + + G +PRLV+LL
Sbjct: 355 YGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQ 414
Query: 298 ----------------EETTILTAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSR 341
I+ + +A ++ + + +LL S
Sbjct: 415 RRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRI-VIRGLNTIPLFVQLLYSPI 473
Query: 342 VNIVKEAAWTISNITAGNSRQIDHVIQEGELNQMALLVEESGGLEKLEALQHHENETVYQ 401
NI + AA + + + A +E G L L H NE V
Sbjct: 474 ENIQRVAAGVLCELAQD--------------KEAAEAIEAEGATAPLTELLHSRNEGVAT 519
Query: 402 KCYKIIS 408
++
Sbjct: 520 YAAAVLF 526
Score = 56.1 bits (133), Expect = 5e-09
Identities = 43/361 (11%), Positives = 103/361 (28%), Gaps = 35/361 (9%)
Query: 21 FDEMRRKRCEMNVELRKAHKDDQLFKRRNIDQLDEIEEENVTVIEPTCMSPIKMTVPEMI 80
+ + ++ ++ + + + +
Sbjct: 177 SKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHL 236
Query: 81 EGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWA 140
+ + R+ +K+ G++ V+LL ++ N A
Sbjct: 237 TDPSQRLVQNCLWTLRNLSDAATKQEG-------MEGLLGTLVQLLGSDDINVVTCAAGI 289
Query: 141 LTNIASGTSEQTMTVINANAIPKFLQLLSSPHLN-----LAEQATWALGNIAGDGARARD 195
L+N+ + M V I ++ + A A L + + A++
Sbjct: 290 LSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQN 349
Query: 196 LLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKICLPLLNQLIHT 255
+ +P ++ L+ P + ++ V I NL + L+ L+
Sbjct: 350 AVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRA 409
Query: 256 TD---------------------VETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVEL 294
E + AL ++ +++ + +P V+L
Sbjct: 410 HQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNR-IVIRGLNTIPLFVQL 468
Query: 295 LDSEETTILTAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISN 354
L S I A + +A + + + G + +LL S + AA +
Sbjct: 469 LYSPIENIQRVAAGVLCELAQDKEAA-EAIEAEGATAPLTELLHSRNEGVATYAAAVLFR 527
Query: 355 I 355
+
Sbjct: 528 M 528
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein
1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 59.4 bits (142), Expect = 6e-10
Identities = 42/310 (13%), Positives = 101/310 (32%), Gaps = 48/310 (15%)
Query: 74 MTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNT 133
+ ++E M SS+ R +AT L K+ +D+ E VV + ++LL+D+N
Sbjct: 3 YHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIK-LDDDSERKVVKMILKLLEDKNGEV 61
Query: 134 QFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGARA 193
Q A L + S E + I + + S L + ++ L +
Sbjct: 62 QNLAVKCLGPLVSKVKEYQVETI----VDTLCTNMLSDKEQLRDISSIGLKTV------- 110
Query: 194 RDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKICLPLLNQLI 253
I L ++ + N+ I+ L + +
Sbjct: 111 ------------IGELPPASSGSALAANVCKKITGR------------------LTSAIA 140
Query: 254 HTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRTVGNI 313
DV + ++ + + + ++ L+ L S + + +G++
Sbjct: 141 KQEDVSVQLEALDIMADMLSRQGGLLVNFHPS-ILTCLLPQLTSPRLAVRKRTIIALGHL 199
Query: 314 ATG-NDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISNITAGNSRQIDHVIQEGEL 372
+ +I+ + +L + ++ + I+ I+ +I +++
Sbjct: 200 VMSCGNIVFVDLIE----HLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIP 255
Query: 373 NQMALLVEES 382
+ +
Sbjct: 256 LVVKFCNVDD 265
Score = 40.1 bits (92), Expect = 5e-04
Identities = 43/316 (13%), Positives = 91/316 (28%), Gaps = 31/316 (9%)
Query: 23 EMRRKRCEMNVELRKAHKDDQLFKRRNIDQLDEIEEENVTVIEPTCMSPIKMTVPEMIEG 82
+ + + EL + L LD + VT + + +
Sbjct: 723 SLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYS 782
Query: 83 MKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWALT 142
S + S K ++ E I + + A +L
Sbjct: 783 --QSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLG 840
Query: 143 NIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIA-------------GD 189
+ L+ SSP + A++ALG+I+
Sbjct: 841 EVGH----HIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEI 896
Query: 190 GARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNP------APDFEKI- 242
++ + L L ++ +I++ ++ NI + C A K+
Sbjct: 897 TSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLT 956
Query: 243 ----KICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSE 298
+ LP L + + S + A+ + H I ++ + ++ L+
Sbjct: 957 LIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLL-KNCIGDFLKTLEDP 1015
Query: 299 ETTILTAALRTVGNIA 314
+ + AL T + A
Sbjct: 1016 DLNVRRVALVTFNSAA 1031
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 56.7 bits (136), Expect = 3e-09
Identities = 39/313 (12%), Positives = 94/313 (30%), Gaps = 28/313 (8%)
Query: 72 IKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENP 131
I++ + + S NP +A ++ + E + I + D
Sbjct: 101 IRLINNAIKNDLASRNPTFMGLALH----CIANVGSREMAEAFAGEIPKIL--VAGDTMD 154
Query: 132 NTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGA 191
+ + A L + + + V + + + LL+ HL + AT + +A
Sbjct: 155 SVKQSAALCLLRLYRTSPD---LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNP 211
Query: 192 RARDLLLGLGTMPQILALVQPNTPTTFL-------RNIVWAISNLCRNKNPAPDFEKIKI 244
+ L + +T + + L + P D
Sbjct: 212 EEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGR 271
Query: 245 CLPLLNQLIHTTDVETLSD------ICWALSY--ISDGHNDKIQAVVDTGVVPRLVELLD 296
L +++ S A+ + IS + + + +L + L
Sbjct: 272 LTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQ 331
Query: 297 SEETTILTAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISNIT 356
ET + AL ++ +A+ ++ + L + V++ + A + +
Sbjct: 332 HRETNLRYLALESMCTLASSEFSHE--AVKTHIETVINALKTERDVSVRQRAVDLLYAMC 389
Query: 357 AGNSRQIDHVIQE 369
+ ++ E
Sbjct: 390 --DRSNAQQIVAE 400
Score = 56.3 bits (135), Expect = 4e-09
Identities = 33/303 (10%), Positives = 92/303 (30%), Gaps = 30/303 (9%)
Query: 69 MSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDD 128
M+ I + ++ A ++ D + V LL+D
Sbjct: 135 MAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSP----DLVPMGDWTSRVVHLLND 190
Query: 129 ENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGN--- 185
++ AT +T +A E+ T ++ A+ + ++++S +L + + +
Sbjct: 191 QHLGVVTAATSLITTLAQKNPEEFKTSVS-LAVSRLSRIVTSASTDLQDYTYYFVPAPWL 249
Query: 186 -----------IAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNK- 233
+ R L A P + N A+ +
Sbjct: 250 SVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLI 309
Query: 234 -NPAPDFEKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLV 292
+ + + L Q + + ++ ++ ++ V T + +
Sbjct: 310 IHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA--SSEFSHEAVKTHIETVIN 367
Query: 293 ELLDSEETTILTAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTI 352
L + ++ A+ + + + + + +M L ++ +I +E +
Sbjct: 368 ALKTERDVSVRQRAVDLLYAMC--DRSNAQQI-----VAEMLSYLETADYSIREEIVLKV 420
Query: 353 SNI 355
+ +
Sbjct: 421 AIL 423
Score = 46.3 bits (109), Expect = 4e-06
Identities = 37/337 (10%), Positives = 98/337 (29%), Gaps = 41/337 (12%)
Query: 34 ELRKAHKDDQLFKRRN-IDQLDEIEEENVTVIEPTCMSPIKMTVPEMIEGMKSSNPKMRM 92
+ D L + + ++N + + + + S
Sbjct: 183 RVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSA---STDLQDY 239
Query: 93 IATRSARKML------SKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWALTNIAS 146
L + +PP ++ G + C+E + ++ +N +
Sbjct: 240 TYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKN 299
Query: 147 GTSEQTMTVINA---------NAIPKFLQLLSSPHLNLAEQATWALGNIAGDGARARDLL 197
+ +++I A + Q L NL A ++ +A +
Sbjct: 300 AVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA---SSEFSHE 356
Query: 198 LGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKICLPLLNQLIHTTD 257
+ ++ ++ + + V + +C N + + + + T D
Sbjct: 357 AVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSN-------AQQIVAEMLSYLETAD 409
Query: 258 VETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRTVGNIATGN 317
+I ++ +++ + VDT ++ L+ + V I
Sbjct: 410 YSIREEIVLKVAILAEKYAVDYTWYVDT-----ILNLIRIAGDYVSEEVWYRVIQIVINR 464
Query: 318 DHQTDCVIQAGGLQKMKKLLSSSRV--NIVKEAAWTI 352
D +Q + + + L + N+VK + +
Sbjct: 465 DD-----VQGYAAKTVFEALQAPACHENLVKVGGYIL 496
Score = 28.2 bits (62), Expect = 2.5
Identities = 18/160 (11%), Positives = 55/160 (34%), Gaps = 18/160 (11%)
Query: 267 ALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRTVGNIATGNDHQTDCVIQ 326
+S + + +++ I+ + + + L S T + AL + N+ + +
Sbjct: 89 FISVLVNSNSELIRLINNA-----IKNDLASRNPTFMGLALHCIANVGS----REMAEAF 139
Query: 327 AGGLQKMKKLLSSSRVNIVKEAAWTISNITAGNSRQIDHVIQEGELNQMALLVEESGGLE 386
AG + K+ + ++ + AA + + + D V +++ L+ +
Sbjct: 140 AGEIPKILVAGDTM-DSVKQSAALCLLRLYRTSP---DLVPMGDWTSRVVHLLNDQHLGV 195
Query: 387 KLEALQ-----HHENETVYQKCYKIISMAFNDSAENSIEN 421
A +N ++ + + ++ +
Sbjct: 196 VTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTD 235
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 458
Score = 54.4 bits (129), Expect = 1e-08
Identities = 25/168 (14%), Positives = 53/168 (31%), Gaps = 6/168 (3%)
Query: 22 DEMRRKRCEMNVELRKAHKDDQLFKRRNIDQLDEIEEENVTVIEPT--CMSPIKMTVPEM 79
DE+ + E + D + +Q E + + + PI
Sbjct: 272 DEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTK 331
Query: 80 IEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATW 139
+ + A +L+ I + +P E + + + + A
Sbjct: 332 QDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHV----LPFIKEHIKNPDWRYRDAAVM 387
Query: 140 ALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIA 187
A I G + + A+P ++L+ P + + + A W +G I
Sbjct: 388 AFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRIC 435
Score = 52.9 bits (125), Expect = 4e-08
Identities = 40/318 (12%), Positives = 88/318 (27%), Gaps = 24/318 (7%)
Query: 22 DEMRRKRCEMNVELRKAHKDDQLFKRRNIDQLDEIEEENVTVIEPTCMSPIKMTVPEMIE 81
+ + E+ +L + + L+ I + + +I+
Sbjct: 119 EIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQ 178
Query: 82 GMKSS--NPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATW 139
GM+ + +++ AT + L + E ++ + E + + A
Sbjct: 179 GMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQ 238
Query: 140 ALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGARARDLLLG 199
L I S + T + ++ + S +A Q N+ +
Sbjct: 239 NLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASE 298
Query: 200 LGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDF-------------------- 239
+ L+ +V ++ ++ D
Sbjct: 299 AAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCC 358
Query: 240 --EKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDS 297
+ + LP + + I D A I +G + +P L+EL+
Sbjct: 359 EDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKD 418
Query: 298 EETTILTAALRTVGNIAT 315
+ A TVG I
Sbjct: 419 PSVVVRDTAAWTVGRICE 436
Score = 36.7 bits (83), Expect = 0.005
Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 72 IKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENP 131
+ +P + E +K+ + + R A + +L + L+ +P +EL+ D +
Sbjct: 363 VPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQ-AMPTLIELMKDPSV 421
Query: 132 NTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLL 168
+ A W + I E IN + LQ L
Sbjct: 422 VVRDTAAWTVGRICELLPEA---AINDVYLAPLLQCL 455
Score = 29.8 bits (65), Expect = 0.70
Identities = 33/251 (13%), Positives = 79/251 (31%), Gaps = 25/251 (9%)
Query: 68 CMSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLD 127
S + + E + + ++R+ A ++ K++S + ++ + + I +E +
Sbjct: 210 KESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSL-YYQYMETYMGPALFAITIEAMK 268
Query: 128 DENPNTQFEATWALTNIASGTSEQTMTVINA----------------NAIPKFLQLLSSP 171
+ + +N+ + + A A+ + +L+
Sbjct: 269 SDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQT 328
Query: 172 HLNLAEQ---ATWALGNIAGDGARARDLLLGLGTMPQILALVQP---NTPTTFLRNIVWA 225
E W AG +P +L ++ N + V A
Sbjct: 329 LTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMA 388
Query: 226 ISNLCRNKNPAPDFEKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDT 285
+ P+ + +P L +L+ V W + I + + A+ D
Sbjct: 389 FGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPE--AAINDV 446
Query: 286 GVVPRLVELLD 296
+ P L L++
Sbjct: 447 YLAPLLQCLIE 457
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 51.3 bits (122), Expect = 1e-07
Identities = 49/325 (15%), Positives = 97/325 (29%), Gaps = 51/325 (15%)
Query: 77 PEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFE 136
P+++ M++ N +++ + +K + D I A V V+ +D NP +
Sbjct: 49 PDVVNCMQTDNLELKKLVYLYL-MNYAKSQP---DMAIMA--VNSFVKDCEDPNPLIRAL 102
Query: 137 ATWALTNIAS--------------------------------GTSEQTMTVINANAIPKF 164
A + I V + +
Sbjct: 103 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSL 162
Query: 165 LQLLSSPHLNLAEQATWALGNIAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVW 224
L++ + + A AL I+ + L L + ++L + T
Sbjct: 163 RDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTE-----WGQI 217
Query: 225 AISNLCRNKNPAPDFEKIKICLPLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVD 284
I + N NP D E IC + +L H LS + + ++ D +
Sbjct: 218 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 277
Query: 285 TGVVPRLVELLDSEETTILTAALRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNI 344
+ + L S E + ALR + I K+ + + + +
Sbjct: 278 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILK------QEIKVFFVKYNDPIYV 331
Query: 345 VKEAAWTISNITAGNSRQIDHVIQE 369
E + + + I V+ E
Sbjct: 332 KLEKLDIMIRLA--SQANIAQVLAE 354
Score = 50.2 bits (119), Expect = 3e-07
Identities = 40/302 (13%), Positives = 91/302 (30%), Gaps = 26/302 (8%)
Query: 73 KMTVPEMIEGMKSSNPKMRMIATRSARK----MLSKERHPPIDELIEAGVVPICVELLDD 128
+ V ++ E + K RK ++K + + G + +L+ D
Sbjct: 109 CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIAD 168
Query: 129 ENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAG 188
NP A AL+ I+ + +N I K L L+ L N
Sbjct: 169 SNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNP 228
Query: 189 DGARARDLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDF--EKIKICL 246
R + + + + + + + V + D+ +K
Sbjct: 229 KDDREAQSIC------ERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLA 282
Query: 247 PLLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAA 306
P L L+ + E ++ I + ++ + + ++ +
Sbjct: 283 PPLVTLLS-GEPEVQYVALRNINLIVQKRPEILKQEIKV------FFVKYNDPIYVKLEK 335
Query: 307 LRTVGNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISNITAGNSRQIDHV 366
L + +A + V L ++K+ + V+ V++A I + +
Sbjct: 336 LDIMIRLA--SQANIAQV-----LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERC 388
Query: 367 IQ 368
+
Sbjct: 389 VS 390
Score = 30.1 bits (67), Expect = 0.57
Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Query: 251 QLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRTV 310
+ T ++E + L + D V++ V+ + I A+RT+
Sbjct: 53 NCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNS-----FVKDCEDPNPLIRALAVRTM 107
Query: 311 GNIATGNDHQTDCVIQAGGLQKMKKLLSSSRVNIVKEAAWTISNITAGNSRQIDHVIQEG 370
G I D T+ + + ++K L + K AA ++ + N++ ++
Sbjct: 108 GCI--RVDKITEYLCEP-----LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLD 160
Query: 371 ELNQM 375
L +
Sbjct: 161 SLRDL 165
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 43.3 bits (100), Expect = 3e-05
Identities = 18/248 (7%), Positives = 50/248 (20%), Gaps = 24/248 (9%)
Query: 73 KMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPN 132
K+ E+ + N R+ + R + ++ V + +E D+N
Sbjct: 18 KLNDDELFRLLDDHNSLKRISSARVLQLRGGQD------------AVRLAIEFCSDKNYI 65
Query: 133 TQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGAR 192
+ + L I + L+ + A +
Sbjct: 66 RRDIGAFILGQIKICKKCEDNVF-----NILNNMALNDKSACVRATAIESTAQRCKKNPI 120
Query: 193 ARD-----LLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKICLP 247
+ + + + +
Sbjct: 121 YSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAIN 180
Query: 248 LLNQLIHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAAL 307
+ + + + + D V+ L + L + +
Sbjct: 181 INKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNT--VYDDII 238
Query: 308 RTVGNIAT 315
G +
Sbjct: 239 EAAGELGD 246
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 42.9 bits (99), Expect = 6e-05
Identities = 16/112 (14%), Positives = 37/112 (33%), Gaps = 7/112 (6%)
Query: 76 VPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQF 135
+P+++ N RM + ++ ++P + + D N +F
Sbjct: 482 IPKVLAMSGDPNYLHRMTTLFCINVLSEVCG----QDITTKHMLPTVLRMAGDPVANVRF 537
Query: 136 EATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIA 187
+L I T + + P +L +++ A AL ++
Sbjct: 538 NVAKSLQKIGPILDNST---LQSEVKPILEKLTQDQDVDVKYFAQEALTVLS 586
Score = 37.8 bits (86), Expect = 0.003
Identities = 32/246 (13%), Positives = 80/246 (32%), Gaps = 27/246 (10%)
Query: 79 MIEGMKSSNPKMRMIATRSARKM---LSKERHPPIDELIEAGVVPICVELLDDENPNTQF 135
+I+ +++ + ++R+ + + + L ER EL+ P + + DE+
Sbjct: 15 LIDELRNEDVQLRLNSIKKLSTIALALGVERT--RSELL-----PFLTDTIYDEDE-VLL 66
Query: 136 EATWALTNIAS-GTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNIAGDGARAR 194
L + + + + +P L + + ++A +L I+ +
Sbjct: 67 ALAEQLGTFTTLVGGPEYVHCL----LPPLESLATVEETVVRDKAVESLRAISHE-HSPS 121
Query: 195 DLLLGLGTMPQILALVQPNTPTTFLRNIVWAISNLCRNKNPAPDFEKIKICLPLLNQLIH 254
DL +P + L + T+ + ++C + + ++ L
Sbjct: 122 DLEAHF--VPLVKRLAGGDWFTSRT--SACGLFSVCYPRVSSAVKAEL---RQYFRNLCS 174
Query: 255 TTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRTVGNIA 314
L + V + ++P L E+ ++ A+ NIA
Sbjct: 175 DDTPMVRRAAASKLGEFAKVLELDN---VKSEIIPMFSNLASDEQDSVRLLAVEACVNIA 231
Query: 315 TGNDHQ 320
+
Sbjct: 232 QLLPQE 237
Score = 37.5 bits (85), Expect = 0.003
Identities = 12/72 (16%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 76 VPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQF 135
+P ++ +R +S +K+ + + ++ PI +L D++ + ++
Sbjct: 521 LPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVK----PILEKLTQDQDVDVKY 576
Query: 136 EATWALTNIASG 147
A ALT ++
Sbjct: 577 FAQEALTVLSLA 588
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 37.4 bits (85), Expect = 0.004
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 110 IDELIEAGVVPICVELLDDENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLS 169
+ + ++ + + + D+ P + + L ++ + I + +P L+
Sbjct: 658 EQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIA-DFMPILGTNLN 716
Query: 170 SPHLNLAEQATWALGNIA-GDGARARDLLLGLGTMPQILALVQ-PNTPTTFLRNIVWAIS 227
+++ ATWA+G I+ G + + + + Q++ ++ PNTP T L N I
Sbjct: 717 PEFISVCNNATWAIGEISIQMGIEMQPYIPMV--LHQLVEIINRPNTPKTLLENTAITIG 774
Query: 228 NLCRNKNPAPDFEKIKICLPLLNQLIHTTDVETLSDICWALSYISD 273
L P P+L Q I C +L I D
Sbjct: 775 RLGY-VCPQ-------EVAPMLQQFIRP--------WCTSLRNIRD 804
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068
{Enterococcus faecalis [TaxId: 1351]}
Length = 213
Score = 30.8 bits (69), Expect = 0.26
Identities = 11/130 (8%), Positives = 27/130 (20%), Gaps = 9/130 (6%)
Query: 35 LRKAHKDDQLFKRRNIDQLDEIEEENVTVIEPTCMSPIKMTVPEMIEGMKSSNPKMRMIA 94
D ++ + ++ + N R +A
Sbjct: 81 FSLEEVVAFKAYVPQKAWWDSVDAWRKFFGSWVALHLTEL-PTIFALFYGAENFWNRRVA 139
Query: 95 TRSARKMLSKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWALTNIASGTSEQTMT 154
L + D L + + E Q W+L + +
Sbjct: 140 LNL---QLMLKEKTNQDLLKK-----AIIYDRTTEEFFIQKAIGWSLRQYSKTNPQWVEE 191
Query: 155 VINANAIPKF 164
++ +
Sbjct: 192 LMKELVLSPL 201
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 29.5 bits (65), Expect = 0.30
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 12/56 (21%)
Query: 126 LDDENPNTQFEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATW 181
+ DEN + + + AL+ + A L+ LS+ + A W
Sbjct: 1 MADENKWVRRDVSTALSRMGD------------EAFEPLLESLSNEDWRIRGAAAW 44
Score = 26.8 bits (58), Expect = 2.2
Identities = 9/89 (10%), Positives = 22/89 (24%), Gaps = 8/89 (8%)
Query: 53 LDEIEEENVTVIEPTCMSPIKMTVPEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDE 112
L+ + E+ + +E + A + L + +
Sbjct: 28 LESLSNEDWRIRGAAAWIIGNFQDERAVEPLIKLLEDDSGFVRSGAARSLEQIGGERVRA 87
Query: 113 LIEAGVVPICVELLDDENPNTQFEATWAL 141
+E +L + + A L
Sbjct: 88 AME--------KLAETGTGFARKVAVNYL 108
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 876
Score = 28.5 bits (62), Expect = 1.9
Identities = 28/220 (12%), Positives = 62/220 (28%), Gaps = 27/220 (12%)
Query: 77 PEMIEGMKSSNPKMRMIATRSARKMLSKERHPPIDELIEAGVVPICVELLDDEN--PNTQ 134
P + G+K+ +A L + I + V+ + +E L +EN + +
Sbjct: 652 PFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDE-VMQLLLENLGNENVHRSVK 710
Query: 135 FEATWALTNIASGTSEQTMTVINANAIPKFLQLLSSPHLNLAEQATWALGNI-------- 186
+ +IA + + + Q + L +
Sbjct: 711 PQILSVFGDIALAIGGEFKKYLE-VVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAY 769
Query: 187 --------AGDGARARDLLLGLGTMPQILALVQ-----PNTPTTFLRNIVWAISNLCRN- 232
D++L + IL+ + + + I +LC
Sbjct: 770 TGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAF 829
Query: 233 -KNPAPDFEKIKICLPLLNQLIHTTDVETLSDICWALSYI 271
K+ E + LL + + + + WA +
Sbjct: 830 GKDVLKLVEARPMIHELLTEGRRSKTNKAKTLARWATKEL 869
>d1bwvs_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate
carboxylase-oxygenase {Galdieria partita [TaxId: 83374]}
Length = 138
Score = 26.0 bits (57), Expect = 5.3
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 110 IDELIEAGVVPICVELLDDENPNTQFEATWALTNIASGTSEQTMTVINA 158
ID +I + +E +D +P + W L + INA
Sbjct: 23 IDYMISKKLAI-GIEYTNDIHPRNAYWEIWGLPLFDVTDPAAVLFEINA 70
>d1jmsa1 a.60.6.1 (A:148-242) Terminal deoxynucleotidyl transferase
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 95
Score = 25.6 bits (56), Expect = 5.6
Identities = 5/44 (11%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 253 IHTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLD 296
+ ++ D + + D I+ +++ G +L+
Sbjct: 53 SLPFPITSMKDTE-GIPCLGDKVKSIIEGIIEDGESSEAKAVLN 95
>d2gf5a2 a.77.1.4 (A:2-83) FADD (Mort1) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 82
Score = 25.0 bits (55), Expect = 7.0
Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 225 AISNLCRNKNPAPDFEKIKICLPLLNQL-----IHTTDVETLSDIC 265
+ LC + E+++ L L + L + E L ++
Sbjct: 21 ELKYLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELLRELL 66
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 959
Score = 26.4 bits (57), Expect = 8.0
Identities = 16/162 (9%), Positives = 39/162 (24%), Gaps = 4/162 (2%)
Query: 103 SKERHPPIDELIEAGVVPICVELLDDENPNTQFEATWALTNIASGTSEQTMTVINANAIP 162
+ + + + V L+ N Q + A+++IA +
Sbjct: 71 DENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWP----TLLS 126
Query: 163 KFLQLLSSPHLNLAEQATWALGNIAGDGARARDLLLGLGTMPQILALVQPNTPTTFLRNI 222
LS+ + + +I + +L +
Sbjct: 127 DLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVD 186
Query: 223 VWAISNLCRNKNPAPDFEKIKICLPLLNQLIHTTDVETLSDI 264
+N + F+ + + + L E D
Sbjct: 187 EQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDN 228
>d1iqca2 a.3.1.5 (A:151-308) Di-heme cytochrome c peroxidase
{Nitrosomonas europaea [TaxId: 915]}
Length = 158
Score = 25.8 bits (56), Expect = 8.1
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 254 HTTDVETLSDICWALSYISDGHNDKIQAVVDTGVVPRLVELLDSEETTILTAALRT 309
+ V TL +I Y DG ++ V+T +L + +E + + A L+T
Sbjct: 76 NVFKVPTLRNIELTYPYFHDGGAATLEQAVETMGRIQLNREFNKDEVSKIVAFLKT 131
>d1s04a_ b.122.1.6 (A:) Hypothetical protein PF0455 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 110
Score = 25.0 bits (55), Expect = 8.3
Identities = 8/26 (30%), Positives = 9/26 (34%)
Query: 405 KIISMAFNDSAENSIENGDTIEFNPQ 430
K I D I+ GD I F
Sbjct: 20 KKIEGRLYDEKRRQIKPGDVISFEGG 45
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.131 0.374
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,567,377
Number of extensions: 72088
Number of successful extensions: 336
Number of sequences better than 10.0: 1
Number of HSP's gapped: 272
Number of HSP's successfully gapped: 56
Length of query: 440
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 352
Effective length of database: 1,199,356
Effective search space: 422173312
Effective search space used: 422173312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.1 bits)