BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9170
(94 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328712480|ref|XP_003244821.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 3
[Acyrthosiphon pisum]
Length = 632
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/47 (87%), Positives = 44/47 (93%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEMADE +AS MVTYFTTC AQLRGRAV++QFSNHKELKTDQTH
Sbjct: 119 QAFLEMADETSASAMVTYFTTCTAQLRGRAVFIQFSNHKELKTDQTH 165
>gi|328712478|ref|XP_001947870.2| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Acyrthosiphon pisum]
Length = 613
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/47 (87%), Positives = 44/47 (93%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEMADE +AS MVTYFTTC AQLRGRAV++QFSNHKELKTDQTH
Sbjct: 119 QAFLEMADETSASAMVTYFTTCTAQLRGRAVFIQFSNHKELKTDQTH 165
>gi|328712476|ref|XP_003244820.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 581
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/47 (87%), Positives = 44/47 (93%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEMADE +AS MVTYFTTC AQLRGRAV++QFSNHKELKTDQTH
Sbjct: 87 QAFLEMADETSASAMVTYFTTCTAQLRGRAVFIQFSNHKELKTDQTH 133
>gi|380018871|ref|XP_003693343.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Apis
florea]
Length = 578
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
QAFLEMADE AA+TMV Y+ +C+AQLRGRAVYVQFSNH+ELKTDQTH+N
Sbjct: 112 QAFLEMADENAAATMVNYYASCMAQLRGRAVYVQFSNHRELKTDQTHTN 160
>gi|350418407|ref|XP_003491847.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
impatiens]
Length = 578
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
QAFLEMADE AA+TMV Y+ +C+AQLRGRAVYVQFSNH+ELKTDQTH+N
Sbjct: 112 QAFLEMADENAAATMVNYYASCMAQLRGRAVYVQFSNHRELKTDQTHTN 160
>gi|340726548|ref|XP_003401618.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
terrestris]
Length = 578
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
QAFLEMADE AA+TMV Y+ +C+AQLRGRAVYVQFSNH+ELKTDQTH+N
Sbjct: 112 QAFLEMADENAAATMVNYYASCMAQLRGRAVYVQFSNHRELKTDQTHTN 160
>gi|332027758|gb|EGI67825.1| Polypyrimidine tract-binding protein 1 [Acromyrmex echinatior]
Length = 225
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 45/55 (81%)
Query: 9 AFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHLT 63
AFLEM DE AA+TMV Y+ T VAQLRGRAVYVQFSNH+ELKTDQTHSN + T
Sbjct: 149 AFLEMGDENAAATMVNYYATGVAQLRGRAVYVQFSNHRELKTDQTHSNNAVSSPT 203
>gi|383854460|ref|XP_003702739.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Megachile
rotundata]
Length = 552
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 47/51 (92%)
Query: 6 EIQAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
E+ AFLEMADE AA+T+V+Y+ +C+AQLRGR VYVQFSNH+ELKTDQTH+N
Sbjct: 9 ELGAFLEMADENAAATIVSYYASCIAQLRGRPVYVQFSNHRELKTDQTHAN 59
>gi|189241313|ref|XP_966484.2| PREDICTED: similar to polypyrimidine tract binding protein
[Tribolium castaneum]
Length = 822
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/51 (76%), Positives = 47/51 (92%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAFLEM +E +A+TMV YF++ +AQLRGRAVYVQ+SNHKELKTDQTHSNA+
Sbjct: 339 QAFLEMGEESSATTMVNYFSSSMAQLRGRAVYVQYSNHKELKTDQTHSNAV 389
>gi|345496639|ref|XP_001603240.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Nasonia
vitripennis]
Length = 587
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/51 (78%), Positives = 46/51 (90%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAFLEMADE +A+TMVTY +C AQLRGRAVYVQFSNH+ELKTDQ H+NA+
Sbjct: 112 QAFLEMADEGSAATMVTYCASCPAQLRGRAVYVQFSNHRELKTDQGHNNAV 162
>gi|307694571|gb|ADN84938.1| hephaestus [Biston betularia]
Length = 181
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEMA+E +A MV YF CVAQLRGRAVYVQFSNHKELKTDQTH
Sbjct: 49 QAFLEMAEEISAVAMVAYFGGCVAQLRGRAVYVQFSNHKELKTDQTH 95
>gi|357623431|gb|EHJ74585.1| putative polypyrimidine tract binding protein [Danaus plexippus]
Length = 621
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEMA+E +A MV YF CVAQLRGRAVYVQFSNHKELKTDQTH
Sbjct: 145 QAFLEMAEEISAVAMVAYFGGCVAQLRGRAVYVQFSNHKELKTDQTH 191
>gi|270013160|gb|EFA09608.1| hypothetical protein TcasGA2_TC011728 [Tribolium castaneum]
Length = 876
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/47 (76%), Positives = 43/47 (91%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEM +E +A+TMV YF++ +AQLRGRAVYVQ+SNHKELKTDQTH
Sbjct: 391 QAFLEMGEESSATTMVNYFSSSMAQLRGRAVYVQYSNHKELKTDQTH 437
>gi|322802926|gb|EFZ23067.1| hypothetical protein SINV_04117 [Solenopsis invicta]
Length = 82
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 41/44 (93%)
Query: 13 MADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
MADE AA+TMVTY+ + VAQLRGRAVYVQFSNH+ELKTDQTHSN
Sbjct: 1 MADENAAATMVTYYASGVAQLRGRAVYVQFSNHRELKTDQTHSN 44
>gi|390178277|ref|XP_003736615.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859388|gb|EIM52688.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 572
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 44/51 (86%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAF+EMADE AA++MV+ +T Q+RGR VYVQFSNH+ELKTDQ+H+N++
Sbjct: 71 QAFIEMADEMAATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHNNSV 121
>gi|198452628|ref|XP_001358876.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132005|gb|EAL28019.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 44/51 (86%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAF+EMADE AA++MV+ +T Q+RGR VYVQFSNH+ELKTDQ+H+N++
Sbjct: 284 QAFIEMADEMAATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHNNSV 334
>gi|195505570|ref|XP_002099562.1| GE23291 [Drosophila yakuba]
gi|194185663|gb|EDW99274.1| GE23291 [Drosophila yakuba]
Length = 802
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 45/52 (86%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALL 59
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ+H+N+++
Sbjct: 306 QAFIEMADEISATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHNNSIV 357
>gi|194740822|ref|XP_001952889.1| GF17502 [Drosophila ananassae]
gi|190625948|gb|EDV41472.1| GF17502 [Drosophila ananassae]
Length = 835
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 45/52 (86%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALL 59
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ+H+N+++
Sbjct: 303 QAFIEMADEISATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHNNSVV 354
>gi|195391604|ref|XP_002054450.1| GJ22800 [Drosophila virilis]
gi|194152536|gb|EDW67970.1| GJ22800 [Drosophila virilis]
Length = 818
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 43/50 (86%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ+H+N+
Sbjct: 315 QAFIEMADEISATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHNNS 364
>gi|195110769|ref|XP_001999952.1| GI22798 [Drosophila mojavensis]
gi|193916546|gb|EDW15413.1| GI22798 [Drosophila mojavensis]
Length = 834
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 43/50 (86%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ+H+N+
Sbjct: 331 QAFIEMADEISATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHNNS 380
>gi|157137151|ref|XP_001663911.1| polypyrimidine tract binding protein [Aedes aegypti]
gi|108869791|gb|EAT34016.1| AAEL013723-PA [Aedes aegypti]
Length = 539
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE AA++MVT FT +RGR VYVQFSNH+ELKTDQ H+
Sbjct: 52 QAFLEMADETAATSMVTMFTATPPIVRGRTVYVQFSNHRELKTDQNHT 99
>gi|170028938|ref|XP_001842351.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167879401|gb|EDS42784.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 535
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE AA++MVT FT +RGR VYVQFSNH+ELKTDQ H+
Sbjct: 60 QAFLEMADESAATSMVTMFTATPPIVRGRTVYVQFSNHRELKTDQNHT 107
>gi|170042024|ref|XP_001848742.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167865565|gb|EDS28948.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 572
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE AA++MVT FT +RGR VYVQFSNH+ELKTDQ H+
Sbjct: 61 QAFLEMADESAATSMVTMFTATPPIVRGRTVYVQFSNHRELKTDQNHT 108
>gi|194904631|ref|XP_001981034.1| GG11844 [Drosophila erecta]
gi|190655672|gb|EDV52904.1| GG11844 [Drosophila erecta]
Length = 800
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 45/52 (86%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALL 59
QAF+EMADE +A+++V+ +T Q+RGR VYVQFSNH+ELKTDQ+H+N+++
Sbjct: 300 QAFIEMADEISATSLVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHNNSIV 351
>gi|45552115|ref|NP_788776.2| hephaestus, isoform G [Drosophila melanogaster]
gi|45446737|gb|AAO41623.2| hephaestus, isoform G [Drosophila melanogaster]
Length = 615
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 118 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 167
>gi|24651780|ref|NP_733460.1| hephaestus, isoform B [Drosophila melanogaster]
gi|28571963|ref|NP_733461.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28571967|ref|NP_788773.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28571969|ref|NP_788774.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28571971|ref|NP_788777.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28571973|ref|NP_788778.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28571975|ref|NP_788779.1| hephaestus, isoform K [Drosophila melanogaster]
gi|28571979|ref|NP_788775.1| hephaestus, isoform F [Drosophila melanogaster]
gi|161079548|ref|NP_001097994.1| hephaestus, isoform N [Drosophila melanogaster]
gi|281362948|ref|NP_001163788.1| hephaestus, isoform P [Drosophila melanogaster]
gi|281362960|ref|NP_001163794.1| hephaestus, isoform V [Drosophila melanogaster]
gi|18042167|gb|AAL57860.1|AF455053_1 hephaestus [Drosophila melanogaster]
gi|23172813|gb|AAF57208.2| hephaestus, isoform B [Drosophila melanogaster]
gi|28381525|gb|AAN14297.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28381526|gb|AAO41620.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28381527|gb|AAO41621.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28381528|gb|AAO41622.1| hephaestus, isoform F [Drosophila melanogaster]
gi|28381530|gb|AAO41624.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28381531|gb|AAO41625.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28381532|gb|AAO41626.1| hephaestus, isoform K [Drosophila melanogaster]
gi|158030462|gb|ABW08818.1| hephaestus, isoform N [Drosophila melanogaster]
gi|189182140|gb|ACD81846.1| LD11808p [Drosophila melanogaster]
gi|272477265|gb|ACZ95081.1| hephaestus, isoform P [Drosophila melanogaster]
gi|272477271|gb|ACZ95087.1| hephaestus, isoform V [Drosophila melanogaster]
Length = 608
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 111 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 160
>gi|17864284|ref|NP_524703.1| hephaestus, isoform C [Drosophila melanogaster]
gi|281362954|ref|NP_001163791.1| hephaestus, isoform S [Drosophila melanogaster]
gi|281362956|ref|NP_001163792.1| hephaestus, isoform T [Drosophila melanogaster]
gi|281362958|ref|NP_001163793.1| hephaestus, isoform U [Drosophila melanogaster]
gi|6665714|gb|AAF22979.1|AF211191_1 polypyrimidine tract binding protein [Drosophila melanogaster]
gi|23172814|gb|AAN14296.1| hephaestus, isoform C [Drosophila melanogaster]
gi|272477268|gb|ACZ95084.1| hephaestus, isoform S [Drosophila melanogaster]
gi|272477269|gb|ACZ95085.1| hephaestus, isoform T [Drosophila melanogaster]
gi|272477270|gb|ACZ95086.1| hephaestus, isoform U [Drosophila melanogaster]
Length = 581
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 84 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 133
>gi|28571965|ref|NP_788780.1| hephaestus, isoform H [Drosophila melanogaster]
gi|281362946|ref|NP_001163787.1| hephaestus, isoform O [Drosophila melanogaster]
gi|281362952|ref|NP_001163790.1| hephaestus, isoform R [Drosophila melanogaster]
gi|16303586|gb|AAL14775.1| hephaestus [Drosophila melanogaster]
gi|28381533|gb|AAO41627.1| hephaestus, isoform H [Drosophila melanogaster]
gi|157816746|gb|ABV82366.1| LD04329p [Drosophila melanogaster]
gi|272477264|gb|ACZ95080.1| hephaestus, isoform O [Drosophila melanogaster]
gi|272477267|gb|ACZ95083.1| hephaestus, isoform R [Drosophila melanogaster]
Length = 789
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 292 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 341
>gi|386766857|ref|NP_001247399.1| hephaestus, isoform Y [Drosophila melanogaster]
gi|383293058|gb|AFH06716.1| hephaestus, isoform Y [Drosophila melanogaster]
Length = 898
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 405 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 454
>gi|386766855|ref|NP_001247398.1| hephaestus, isoform W [Drosophila melanogaster]
gi|383293057|gb|AFH06715.1| hephaestus, isoform W [Drosophila melanogaster]
Length = 799
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 306 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 355
>gi|161079541|ref|NP_001097992.1| hephaestus, isoform L [Drosophila melanogaster]
gi|158030460|gb|ABW08816.1| hephaestus, isoform L [Drosophila melanogaster]
Length = 622
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 125 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 174
>gi|17861972|gb|AAL39463.1| LD03185p [Drosophila melanogaster]
Length = 571
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 111 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 160
>gi|161079544|ref|NP_001097993.1| hephaestus, isoform M [Drosophila melanogaster]
gi|16589094|gb|AAL27010.1|AF436844_1 hephaestus [Drosophila melanogaster]
gi|158030461|gb|ABW08817.1| hephaestus, isoform M [Drosophila melanogaster]
Length = 568
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 71 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 120
>gi|195575404|ref|XP_002105669.1| GD16206 [Drosophila simulans]
gi|194201596|gb|EDX15172.1| GD16206 [Drosophila simulans]
Length = 792
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 43/51 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N++
Sbjct: 295 QAFIEMADEISATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQGHNNSI 345
>gi|195354540|ref|XP_002043755.1| GM16408 [Drosophila sechellia]
gi|194128955|gb|EDW50998.1| GM16408 [Drosophila sechellia]
Length = 792
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 43/51 (84%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N++
Sbjct: 295 QAFIEMADEISATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQGHNNSI 345
>gi|195446082|ref|XP_002070619.1| GK10936 [Drosophila willistoni]
gi|194166704|gb|EDW81605.1| GK10936 [Drosophila willistoni]
Length = 629
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAF+EMADE AA++MV+ +T Q+RGR VYVQFSNH+ELKTDQ+H+
Sbjct: 71 QAFIEMADEVAATSMVSCYTVSPPQMRGRMVYVQFSNHRELKTDQSHN 118
>gi|321470924|gb|EFX81898.1| hypothetical protein DAPPUDRAFT_302853 [Daphnia pulex]
Length = 540
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 8 QAFLEMADECAASTMVTYFTT-CVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAFLEMADE AA +MV YF++ AQLRGR V+VQ+SNH LKTDQ+HSNA+
Sbjct: 72 QAFLEMADEGAAISMVNYFSSGTSAQLRGRNVFVQYSNHVALKTDQSHSNAV 123
>gi|242023546|ref|XP_002432193.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
gi|212517590|gb|EEB19455.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
Length = 513
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/39 (82%), Positives = 36/39 (92%)
Query: 16 ECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
E +AS MV+YFT+C AQLRGRAV+VQFSNHKELKTDQTH
Sbjct: 70 ELSASEMVSYFTSCAAQLRGRAVFVQFSNHKELKTDQTH 108
>gi|195055925|ref|XP_001994863.1| GH17472 [Drosophila grimshawi]
gi|193892626|gb|EDV91492.1| GH17472 [Drosophila grimshawi]
Length = 920
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAF+EMADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ+H+
Sbjct: 420 QAFIEMADEISATSMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHN 467
>gi|442755235|gb|JAA69777.1| Putative polypyrimidine tract binding protein 1 [Ixodes ricinus]
Length = 274
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
QAFLEM+DE +A +MV YFT +RGR VYVQFSNH+ELKT+ H N
Sbjct: 132 QAFLEMSDEASAVSMVDYFTKASPTVRGRVVYVQFSNHRELKTEGMHGN 180
>gi|347970969|ref|XP_318405.4| AGAP003945-PA [Anopheles gambiae str. PEST]
gi|333469570|gb|EAA13599.5| AGAP003945-PA [Anopheles gambiae str. PEST]
Length = 601
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHLT 63
QAF+EM DE AASTMV+ F LRGR VYVQ+SNH+ELK DQ H+ A+ LT
Sbjct: 109 QAFIEMGDETAASTMVSVFHANPPPLRGRTVYVQYSNHRELKIDQNHAIAVTQDLT 164
>gi|427796833|gb|JAA63868.1| Putative hephaestus, partial [Rhipicephalus pulchellus]
Length = 554
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/47 (68%), Positives = 35/47 (74%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEMADE +A MV YFT +RGR VYVQFSNH+ELKTD H
Sbjct: 123 QAFLEMADEGSAVAMVDYFTKASPSVRGRVVYVQFSNHRELKTDNVH 169
>gi|427789193|gb|JAA60048.1| Putative hephaestus [Rhipicephalus pulchellus]
Length = 559
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/47 (68%), Positives = 35/47 (74%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEMADE +A MV YFT +RGR VYVQFSNH+ELKTD H
Sbjct: 128 QAFLEMADEGSAVAMVDYFTKASPSVRGRVVYVQFSNHRELKTDNVH 174
>gi|241997960|ref|XP_002433623.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
gi|215495382|gb|EEC05023.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
Length = 512
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
QAFLEM+DE +A +MV YFT +RGR VYVQFSNH+ELKT+ H N
Sbjct: 87 QAFLEMSDEASAVSMVDYFTKASPTVRGRVVYVQFSNHRELKTEGMHGN 135
>gi|55669743|pdb|1SJQ|A Chain A, Nmr Structure Of Rrm1 From Human Polypyrimidine Tract
Binding Protein Isoform 1 (Ptb1)
Length = 105
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + + A
Sbjct: 54 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 103
>gi|253722484|pdb|2AD9|A Chain A, Solution Structure Of Polypyrimidine Tract Binding Protein
Rbd1 Complexed With Cucucu Rna
Length = 119
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + + A
Sbjct: 69 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 118
>gi|291227384|ref|XP_002733659.1| PREDICTED: polypyrimidine tract-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 558
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEM +E AA+TMV Y++ A +RGR VYVQFSNHKELKT+
Sbjct: 106 QAFLEMENETAATTMVNYYSHVTANIRGRPVYVQFSNHKELKTE 149
>gi|351714013|gb|EHB16932.1| Polypyrimidine tract-binding protein 1, partial [Heterocephalus
glaber]
Length = 548
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLH 61
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + + A+ H
Sbjct: 84 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQAVRAH 137
>gi|148699702|gb|EDL31649.1| mCG13402, isoform CRA_f [Mus musculus]
Length = 257
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + +
Sbjct: 122 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSSPN 169
>gi|312378791|gb|EFR25262.1| hypothetical protein AND_09562 [Anopheles darlingi]
Length = 399
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 36/48 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAF+EMADE AAS MV+ F +RGR VYVQ+SNH+ELK DQ H+
Sbjct: 46 QAFIEMADESAASAMVSMFHANPPFVRGRTVYVQYSNHRELKIDQNHA 93
>gi|50261257|gb|AAT72299.1| polypyrimidine tract binding protein [Drosophila melanogaster]
Length = 493
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 13 MADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
MADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 1 MADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 45
>gi|281362950|ref|NP_001163789.1| hephaestus, isoform Q [Drosophila melanogaster]
gi|272477266|gb|ACZ95082.1| hephaestus, isoform Q [Drosophila melanogaster]
Length = 493
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 13 MADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
MADE +A++MV+ +T Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct: 1 MADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 45
>gi|354507573|ref|XP_003515830.1| PREDICTED: polypyrimidine tract-binding protein 1-like, partial
[Cricetulus griseus]
Length = 217
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYLQFSNHKELKTDSSPN 142
>gi|397485367|ref|XP_003813820.1| PREDICTED: polypyrimidine tract-binding protein 1 [Pan paniscus]
Length = 783
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + + A+
Sbjct: 445 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQAV 495
>gi|74152131|dbj|BAE32096.1| unnamed protein product [Mus musculus]
Length = 555
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV YFT+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYFTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|118404352|ref|NP_001072479.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
gi|112418598|gb|AAI21904.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
Length = 531
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLE+A E AASTMV Y+TT LR + +Y+Q+SNHKELKTD
Sbjct: 96 QAFLELATEEAASTMVNYYTTITPHLRNQPIYIQYSNHKELKTD 139
>gi|149034650|gb|EDL89387.1| polypyrimidine tract binding protein 1, isoform CRA_d [Rattus
norvegicus]
Length = 500
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM+ E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 65 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 110
>gi|149034648|gb|EDL89385.1| polypyrimidine tract binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 490
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM+ E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 55 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 100
>gi|402765974|ref|NP_071961.2| polypyrimidine tract-binding protein 1 isoform b [Rattus
norvegicus]
gi|149034649|gb|EDL89386.1| polypyrimidine tract binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 530
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM+ E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|402743987|ref|NP_001257986.1| polypyrimidine tract-binding protein 1 isoform a [Rattus
norvegicus]
gi|38197632|gb|AAH61858.1| Ptbp1 protein [Rattus norvegicus]
gi|149034647|gb|EDL89384.1| polypyrimidine tract binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 556
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM+ E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|397524|emb|CAA52653.1| polypyrimidine tract binding protein [Rattus norvegicus]
Length = 556
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM+ E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|57002|emb|CAA43202.1| pyrimidine binding protein 1 [Rattus norvegicus]
Length = 530
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM+ E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|266862|sp|Q00438.1|PTBP1_RAT RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I; AltName: Full=Pyrimidine-binding protein;
Short=PYBP
Length = 555
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM+ E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|417402720|gb|JAA48196.1| Putative polypyrimidine tract-binding protein [Desmodus rotundus]
Length = 557
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + + A
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145
>gi|417402381|gb|JAA48040.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 531
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + + A
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145
>gi|351706875|gb|EHB09794.1| Polypyrimidine tract-binding protein 1 [Heterocephalus glaber]
Length = 543
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + + A
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145
>gi|444509522|gb|ELV09317.1| Polypyrimidine tract-binding protein 1, partial [Tupaia chinensis]
Length = 522
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD + + A
Sbjct: 84 QAFIEMNAEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 133
>gi|431922192|gb|ELK19283.1| Polypyrimidine tract-binding protein 1 [Pteropus alecto]
Length = 566
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +YVQFSNHKELKTD +
Sbjct: 102 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYVQFSNHKELKTDSS 147
>gi|432101132|gb|ELK29416.1| Polypyrimidine tract-binding protein 1 [Myotis davidii]
Length = 566
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 104 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 149
>gi|426386370|ref|XP_004059658.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 552
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|426386368|ref|XP_004059657.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 533
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|426386366|ref|XP_004059656.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 559
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|30583817|gb|AAP36157.1| Homo sapiens polypyrimidine tract binding protein 1 [synthetic
construct]
gi|61369451|gb|AAX43339.1| polypyrimidine tract binding protein 1 [synthetic construct]
Length = 558
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|73987389|ref|XP_542215.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Canis
lupus familiaris]
Length = 557
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|73987397|ref|XP_868637.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 6 [Canis
lupus familiaris]
Length = 550
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|73987401|ref|XP_868641.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 8 [Canis
lupus familiaris]
Length = 531
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|47523538|ref|NP_999396.1| polypyrimidine tract-binding protein 1 [Sus scrofa]
gi|2500586|sp|Q29099.1|PTBP1_PIG RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|1122433|emb|CAA63597.1| polypyrimidine tract-binding protein [Sus scrofa]
Length = 557
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|14165466|ref|NP_114368.1| polypyrimidine tract-binding protein 1 isoform c [Homo sapiens]
gi|332850814|ref|XP_003316017.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Pan
troglodytes]
gi|131528|sp|P26599.1|PTBP1_HUMAN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=57 kDa RNA-binding protein PPTB-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|35768|emb|CAA43973.1| polypirimidine tract binding protein [Homo sapiens]
gi|35774|emb|CAA43056.1| polypyrimidine tract-binding protein (pPTB) [Homo sapiens]
gi|4096061|gb|AAC99798.1| PTB_HUMAN [Homo sapiens]
gi|13325140|gb|AAH04383.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|119581559|gb|EAW61155.1| polypyrimidine tract binding protein 1, isoform CRA_d [Homo
sapiens]
gi|261860774|dbj|BAI46909.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|410218530|gb|JAA06484.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301206|gb|JAA29203.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 531
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|410949959|ref|XP_003981684.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Felis catus]
Length = 508
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|403308155|ref|XP_003944537.1| PREDICTED: uncharacterized protein LOC101029560 [Saimiri
boliviensis boliviensis]
Length = 1167
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 331 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 376
>gi|402903490|ref|XP_003914598.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Papio
anubis]
Length = 549
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 140
>gi|395831594|ref|XP_003788880.1| PREDICTED: polypyrimidine tract-binding protein 1 [Otolemur
garnettii]
Length = 582
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 128 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 173
>gi|395750059|ref|XP_003779055.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Pongo abelii]
Length = 782
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 321 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 366
>gi|402903488|ref|XP_003914597.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Papio
anubis]
gi|380814966|gb|AFE79357.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
gi|384948418|gb|AFI37814.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
Length = 530
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 140
>gi|402903486|ref|XP_003914596.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Papio
anubis]
gi|380814964|gb|AFE79356.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
gi|384948416|gb|AFI37813.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
Length = 556
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 140
>gi|355714176|gb|AES04919.1| polypyrimidine tract binding protein 1 [Mustela putorius furo]
Length = 353
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|332255809|ref|XP_003277021.1| PREDICTED: polypyrimidine tract-binding protein 1 [Nomascus
leucogenys]
Length = 505
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 66 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 111
>gi|301776290|ref|XP_002923578.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 526
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|297275608|ref|XP_001092088.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Macaca
mulatta]
Length = 556
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 140
>gi|297275606|ref|XP_001092214.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 530
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 140
>gi|297275604|ref|XP_002801040.1| PREDICTED: polypyrimidine tract-binding protein 1 [Macaca mulatta]
Length = 549
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 140
>gi|281341342|gb|EFB16926.1| hypothetical protein PANDA_012716 [Ailuropoda melanoleuca]
Length = 540
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 84 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 129
>gi|194212378|ref|XP_001915461.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Equus caballus]
Length = 596
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 143 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 188
>gi|119581562|gb|EAW61158.1| polypyrimidine tract binding protein 1, isoform CRA_g [Homo
sapiens]
Length = 501
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 66 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 111
>gi|119581557|gb|EAW61153.1| polypyrimidine tract binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 527
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 66 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 111
>gi|119581561|gb|EAW61157.1| polypyrimidine tract binding protein 1, isoform CRA_f [Homo
sapiens]
Length = 520
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 66 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 111
>gi|62087400|dbj|BAD92147.1| polypyrimidine tract-binding protein 1 isoform c variant [Homo
sapiens]
Length = 329
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 113 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 158
>gi|14165464|ref|NP_114367.1| polypyrimidine tract-binding protein 1 isoform b [Homo sapiens]
gi|332850820|ref|XP_003316018.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Pan
troglodytes]
gi|35770|emb|CAA46443.1| polypirimidine tract binding protein [Homo sapiens]
gi|119581556|gb|EAW61152.1| polypyrimidine tract binding protein 1, isoform CRA_a [Homo
sapiens]
gi|410218532|gb|JAA06485.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 550
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|4506243|ref|NP_002810.1| polypyrimidine tract-binding protein 1 isoform a [Homo sapiens]
gi|332850812|ref|XP_001172084.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Pan
troglodytes]
gi|32354|emb|CAA47386.1| nuclear ribonucleoprotein [Homo sapiens]
gi|35772|emb|CAA46444.1| polypirimidine tract binding protein [Homo sapiens]
gi|12803183|gb|AAH02397.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|15489171|gb|AAH13694.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|30582477|gb|AAP35465.1| polypyrimidine tract binding protein 1 [Homo sapiens]
gi|61359435|gb|AAX41718.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|61359442|gb|AAX41719.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|119581558|gb|EAW61154.1| polypyrimidine tract binding protein 1, isoform CRA_c [Homo
sapiens]
gi|410218528|gb|JAA06483.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301208|gb|JAA29204.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 557
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|440893263|gb|ELR46101.1| Polypyrimidine tract-binding protein 1, partial [Bos grunniens
mutus]
Length = 548
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 87 QAFIEMHTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 132
>gi|426229473|ref|XP_004008815.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Ovis
aries]
Length = 550
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMHTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|426229469|ref|XP_004008813.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Ovis
aries]
Length = 557
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMHTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|27806103|ref|NP_776867.1| polypyrimidine tract-binding protein 1 [Bos taurus]
gi|426229471|ref|XP_004008814.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Ovis
aries]
gi|75073578|sp|Q8WN55.1|PTBP1_BOVIN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB
gi|17298537|gb|AAL38169.1|AF445640_1 polypyrimidine-tract binding protein [Bos taurus]
gi|296485353|tpg|DAA27468.1| TPA: polypyrimidine tract-binding protein 1 [Bos taurus]
Length = 531
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMHTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|158454983|gb|AAI03384.1| PTBP1 protein [Bos taurus]
Length = 446
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMHTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 141
>gi|55824722|gb|AAH86489.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|42490826|gb|AAH66210.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|74196849|dbj|BAE43140.1| unnamed protein product [Mus musculus]
Length = 530
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|74194434|dbj|BAE37269.1| unnamed protein product [Mus musculus]
Length = 520
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|74178228|dbj|BAE29899.1| unnamed protein product [Mus musculus]
Length = 529
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|28849152|dbj|BAC65159.1| polypirimidine tract binding protein [Mus musculus]
Length = 554
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|131529|sp|P17225.2|PTBP1_MOUSE RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|53553|emb|CAA36321.1| 25kDa nuclear protein [Mus musculus]
Length = 527
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|354480918|ref|XP_003502650.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 591
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 131 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 176
>gi|344243367|gb|EGV99470.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 528
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 68 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 113
>gi|148699701|gb|EDL31648.1| mCG13402, isoform CRA_e [Mus musculus]
Length = 454
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 111 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 156
>gi|148699697|gb|EDL31644.1| mCG13402, isoform CRA_b [Mus musculus]
Length = 499
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 65 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 110
>gi|148699703|gb|EDL31650.1| mCG13402, isoform CRA_g [Mus musculus]
Length = 366
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|116517301|ref|NP_001070831.1| polypyrimidine tract-binding protein 1 isoform 1 [Mus musculus]
gi|13938631|gb|AAH07472.1| Polypyrimidine tract binding protein 1 [Mus musculus]
gi|26328983|dbj|BAC28230.1| unnamed protein product [Mus musculus]
gi|26334239|dbj|BAC30837.1| unnamed protein product [Mus musculus]
gi|26335929|dbj|BAC31665.1| unnamed protein product [Mus musculus]
gi|26341260|dbj|BAC34292.1| unnamed protein product [Mus musculus]
gi|26353506|dbj|BAC40383.1| unnamed protein product [Mus musculus]
gi|74191391|dbj|BAE30277.1| unnamed protein product [Mus musculus]
gi|148699699|gb|EDL31646.1| mCG13402, isoform CRA_c [Mus musculus]
Length = 555
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|116517303|ref|NP_032982.2| polypyrimidine tract-binding protein 1 isoform 2 [Mus musculus]
gi|26336949|dbj|BAC32158.1| unnamed protein product [Mus musculus]
gi|26342100|dbj|BAC34712.1| unnamed protein product [Mus musculus]
gi|26349809|dbj|BAC38544.1| unnamed protein product [Mus musculus]
gi|74211646|dbj|BAE29183.1| unnamed protein product [Mus musculus]
gi|74212275|dbj|BAE40295.1| unnamed protein product [Mus musculus]
gi|148699696|gb|EDL31643.1| mCG13402, isoform CRA_a [Mus musculus]
gi|148699698|gb|EDL31645.1| mCG13402, isoform CRA_a [Mus musculus]
Length = 529
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|26353062|dbj|BAC40161.1| unnamed protein product [Mus musculus]
Length = 299
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|20809354|gb|AAH28848.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140
>gi|26331660|dbj|BAC29560.1| unnamed protein product [Mus musculus]
gi|148699700|gb|EDL31647.1| mCG13402, isoform CRA_d [Mus musculus]
Length = 489
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 55 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 100
>gi|395513379|ref|XP_003760903.1| PREDICTED: polypyrimidine tract-binding protein 1 [Sarcophilus
harrisii]
Length = 557
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E A++TMV+Y+TT LR + +Y+QFSNHKELKTD +
Sbjct: 96 QAFLEMNTEEASNTMVSYYTTVTPVLRSQPIYIQFSNHKELKTDNS 141
>gi|334326796|ref|XP_001375584.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Monodelphis
domestica]
Length = 557
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E A++TMV+Y+TT LR + +Y+QFSNHKELKTD +
Sbjct: 96 QAFLEMNTEEASNTMVSYYTTVTPVLRSQPIYIQFSNHKELKTDNS 141
>gi|387017724|gb|AFJ50980.1| Polypyrimidine tract-binding protein 1-like [Crotalus adamanteus]
Length = 556
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV+Y+TT LR + +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVSYYTTIAPVLRSQQIYIQFSNHKELKTDNS 141
>gi|449273011|gb|EMC82640.1| Polypyrimidine tract-binding protein 1, partial [Columba livia]
Length = 525
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QAF+EM E A++TMV Y+TT LR + +Y+QFSNHKELKTD + + A+
Sbjct: 58 QAFIEMNTEEASNTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDSSANQAV 108
>gi|405953685|gb|EKC21299.1| Regulator of differentiation 1 [Crassostrea gigas]
Length = 764
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 36/48 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLE DE AA TMV++ AQ+R + VYVQFSNHKELKTDQ +S
Sbjct: 318 QAFLEFLDEQAAVTMVSFHQQNPAQIRMKPVYVQFSNHKELKTDQANS 365
>gi|19911240|dbj|BAB86943.1| polypirimidine tract binding protein [Mus musculus]
Length = 528
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AASTMV Y+T+ LRG+ Y+QFSNHKELKTD +
Sbjct: 95 QAFIEMNTEEAASTMVNYYTSVAPVLRGQPNYIQFSNHKELKTDSS 140
>gi|348550212|ref|XP_003460926.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Cavia porcellus]
Length = 531
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVPPVLRGQPIYIQFSNHKELKTDSS 141
>gi|348550210|ref|XP_003460925.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Cavia porcellus]
Length = 557
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHKELKTD +
Sbjct: 96 QAFIEMNTEEAANTMVNYYTSVPPVLRGQPIYIQFSNHKELKTDSS 141
>gi|326934420|ref|XP_003213288.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Meleagris
gallopavo]
Length = 526
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+TT LR + +Y+QFSNHKELKTD +
Sbjct: 66 QAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNS 111
>gi|71896363|ref|NP_001026106.1| polypyrimidine tract-binding protein 1 [Gallus gallus]
gi|60098495|emb|CAH65078.1| hypothetical protein RCJMB04_3b17 [Gallus gallus]
Length = 526
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+TT LR + +Y+QFSNHKELKTD +
Sbjct: 66 QAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNS 111
>gi|441622594|ref|XP_003264050.2| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 3 isoform 1 [Nomascus leucogenys]
Length = 555
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD + A
Sbjct: 99 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQA 148
>gi|327263703|ref|XP_003216657.1| PREDICTED: regulator of differentiation 1-like [Anolis
carolinensis]
Length = 558
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD + A
Sbjct: 102 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQA 151
>gi|125827109|ref|XP_001335967.1| PREDICTED: regulator of differentiation 1 [Danio rerio]
Length = 522
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAF+EMA E AA TMV Y+TT +R + VY+Q+SNH+ELKTD
Sbjct: 66 QAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTD 109
>gi|426216016|ref|XP_004002265.1| PREDICTED: polypyrimidine tract-binding protein 2 [Ovis aries]
Length = 510
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T + A
Sbjct: 68 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQA 117
>gi|444730196|gb|ELW70586.1| Regulator of differentiation 1 [Tupaia chinensis]
Length = 386
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 64 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTD 107
>gi|395514526|ref|XP_003761466.1| PREDICTED: polypyrimidine tract-binding protein 3 [Sarcophilus
harrisii]
Length = 505
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 75 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTD 118
>gi|354486792|ref|XP_003505562.1| PREDICTED: regulator of differentiation 1-like [Cricetulus griseus]
Length = 643
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 187 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTD 230
>gi|351710810|gb|EHB13729.1| Regulator of differentiation 1, partial [Heterocephalus glaber]
Length = 539
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 83 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTD 126
>gi|348556107|ref|XP_003463864.1| PREDICTED: regulator of differentiation 1-like [Cavia porcellus]
Length = 688
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 232 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTD 275
>gi|344271491|ref|XP_003407571.1| PREDICTED: regulator of differentiation 1 [Loxodonta africana]
Length = 581
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 125 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTD 168
>gi|344244560|gb|EGW00664.1| Regulator of differentiation 1 [Cricetulus griseus]
Length = 523
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 67 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTD 110
>gi|291382801|ref|XP_002708166.1| PREDICTED: ROD1 regulator of differentiation 1-like [Oryctolagus
cuniculus]
Length = 1000
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 544 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTD 587
>gi|345323919|ref|XP_001506947.2| PREDICTED: polypyrimidine tract-binding protein 1 [Ornithorhynchus
anatinus]
Length = 707
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV+Y+TT LR + +++QFSNHKELKTD +
Sbjct: 246 QAFIEMNTEEAANTMVSYYTTVAPVLRSQPIFIQFSNHKELKTDNS 291
>gi|426362704|ref|XP_004048495.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 591
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 105 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 148
>gi|25058871|gb|AAH39896.1| Similar to ROD1 regulator of differentiation 1 (S. pombe), partial
[Homo sapiens]
Length = 618
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 139 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 182
>gi|410043023|ref|XP_003951547.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 554
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 111
>gi|410043020|ref|XP_003951546.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 558
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 102 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 145
>gi|403266191|ref|XP_003925277.1| PREDICTED: polypyrimidine tract-binding protein 3 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 102 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 145
>gi|402896665|ref|XP_003911411.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Papio
anubis]
Length = 521
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 65 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 108
>gi|402896663|ref|XP_003911410.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Papio
anubis]
Length = 555
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 99 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 142
>gi|402896661|ref|XP_003911409.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Papio
anubis]
Length = 524
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 111
>gi|395740824|ref|XP_002820149.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pongo
abelii]
Length = 555
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 99 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 142
>gi|395740821|ref|XP_002820150.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pongo
abelii]
Length = 524
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 111
>gi|355753108|gb|EHH57154.1| hypothetical protein EGM_06734, partial [Macaca fascicularis]
Length = 539
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 83 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 126
>gi|355567525|gb|EHH23866.1| hypothetical protein EGK_07422, partial [Macaca mulatta]
Length = 558
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 102 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 145
>gi|349732190|ref|NP_001231826.1| polypyrimidine tract-binding protein 3 isoform 5 [Homo sapiens]
Length = 547
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 111
>gi|343959136|dbj|BAK63423.1| regulator of differentiation 1 [Pan troglodytes]
Length = 524
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 111
>gi|297685129|ref|XP_002820148.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pongo
abelii]
Length = 558
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 102 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 145
>gi|297270365|ref|XP_001099980.2| PREDICTED: regulator of differentiation 1-like [Macaca mulatta]
Length = 860
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 404 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 447
>gi|255003738|ref|NP_001157260.1| polypyrimidine tract-binding protein 3 isoform 2 [Homo sapiens]
gi|397479181|ref|XP_003810906.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
paniscus]
gi|410043017|ref|XP_003951545.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
gi|194380114|dbj|BAG63824.1| unnamed protein product [Homo sapiens]
Length = 524
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 111
>gi|67678144|gb|AAH97557.1| VgRBP60 protein [Xenopus laevis]
Length = 472
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM+ E AA+TM++Y+T LR + +Y+Q+SNHKELKTD +
Sbjct: 99 QAFLEMSTEEAANTMISYYTNVAPVLRSQPIYIQYSNHKELKTDNS 144
>gi|255003744|ref|NP_001157262.1| polypyrimidine tract-binding protein 3 isoform 3 [Homo sapiens]
gi|114626182|ref|XP_528390.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 6 [Pan
troglodytes]
gi|397479185|ref|XP_003810908.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pan
paniscus]
gi|51476645|emb|CAH18301.1| hypothetical protein [Homo sapiens]
Length = 555
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 99 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 142
>gi|38569466|ref|NP_005147.3| polypyrimidine tract-binding protein 3 isoform 1 [Homo sapiens]
gi|218511814|sp|O95758.2|PTBP3_HUMAN RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|119579504|gb|EAW59100.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
gi|119579505|gb|EAW59101.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
Length = 552
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 96 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 139
>gi|349732192|ref|NP_001231827.1| polypyrimidine tract-binding protein 3 isoform 6 [Homo sapiens]
gi|114626184|ref|XP_001149612.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 5 [Pan
troglodytes]
gi|397479183|ref|XP_003810907.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pan
paniscus]
gi|27882560|gb|AAH44585.1| ROD1 protein [Homo sapiens]
gi|119579503|gb|EAW59099.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Homo
sapiens]
Length = 558
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 102 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 145
>gi|426362706|ref|XP_004048496.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
gi|4514554|dbj|BAA75466.1| Rod1 [Homo sapiens]
Length = 521
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 65 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 108
>gi|410978917|ref|XP_003995834.1| PREDICTED: polypyrimidine tract-binding protein 3 [Felis catus]
Length = 540
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALL 59
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD + A+
Sbjct: 139 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTDNLPNQAIF 190
>gi|345306392|ref|XP_001508115.2| PREDICTED: polypyrimidine tract-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 606
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + VY+Q+SNHKELKTD T
Sbjct: 170 QAFLELATEEAAITMVNYYSAVTPHLRNQPVYIQYSNHKELKTDNT 215
>gi|432964272|ref|XP_004086906.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 541
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 43/82 (52%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHLTIGII 67
QAFLEM E AA TMV Y+ T +R VYVQFSNHKELKTD + + +
Sbjct: 116 QAFLEMGTEEAAITMVNYYNTVPPHVRNSPVYVQFSNHKELKTDAASQRTQAVLQAVSAV 175
Query: 68 LRPATHYQVHLIRSACQVYLIV 89
P + Q L ++ V I+
Sbjct: 176 QPPGSEVQDVLAAASSPVLRII 197
>gi|147906715|ref|NP_001083815.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|6002571|gb|AAF00041.1|AF091370_1 hnRNP I-related RNA transport protein VgRBP60 [Xenopus laevis]
Length = 552
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM+ E AA+TM++Y+T LR + +Y+Q+SNHKELKTD +
Sbjct: 99 QAFLEMSTEEAANTMISYYTNVAPVLRSQPIYIQYSNHKELKTDDS 144
>gi|432103873|gb|ELK30706.1| Polypyrimidine tract-binding protein 2 [Myotis davidii]
Length = 538
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 62 QAFLELATEEAAVTMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 107
>gi|74193172|dbj|BAE20599.1| unnamed protein product [Mus musculus]
gi|74193487|dbj|BAE20681.1| unnamed protein product [Mus musculus]
gi|74193495|dbj|BAE20685.1| unnamed protein product [Mus musculus]
Length = 241
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|149025820|gb|EDL82063.1| polypyrimidine tract binding protein 2, isoform CRA_c [Rattus
norvegicus]
Length = 243
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|355714182|gb|AES04921.1| polypyrimidine tract binding protein 2 [Mustela putorius furo]
Length = 121
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 41 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 86
>gi|344255742|gb|EGW11846.1| Polypyrimidine tract-binding protein 2 [Cricetulus griseus]
Length = 212
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 65 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 110
>gi|158519869|ref|NP_001103551.1| polypyrimidine tract-binding protein 2 [Bos taurus]
gi|158455056|gb|AAI22581.1| PTBP2 protein [Bos taurus]
Length = 255
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|13879326|gb|AAH06638.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 520
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 64 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 107
>gi|13786186|ref|NP_112636.1| polypyrimidine tract-binding protein 3 [Rattus norvegicus]
gi|50401225|sp|Q9Z118.1|PTBP3_RAT RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|4514552|dbj|BAA75465.1| Rod1 [Rattus norvegicus]
Length = 523
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 67 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 110
>gi|255003709|ref|NP_659153.2| polypyrimidine tract-binding protein 3 isoform 1 [Mus musculus]
Length = 551
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 95 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 138
>gi|149037108|gb|EDL91639.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
gi|149037109|gb|EDL91640.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
Length = 514
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 58 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 101
>gi|149037107|gb|EDL91638.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a
[Rattus norvegicus]
Length = 528
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 98 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 141
>gi|148670261|gb|EDL02208.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Mus
musculus]
Length = 528
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 98 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 141
>gi|148670263|gb|EDL02210.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Mus
musculus]
Length = 556
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 100 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 143
>gi|148670262|gb|EDL02209.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Mus
musculus]
Length = 590
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 134 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 177
>gi|30039680|ref|NP_835458.1| polypyrimidine tract-binding protein 3 isoform 2 [Mus musculus]
gi|50401558|sp|Q8BHD7.1|PTBP3_MOUSE RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|26329429|dbj|BAC28453.1| unnamed protein product [Mus musculus]
gi|26353590|dbj|BAC40425.1| unnamed protein product [Mus musculus]
gi|34785867|gb|AAH57641.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 523
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TM+ Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 67 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTD 110
>gi|90075792|dbj|BAE87576.1| unnamed protein product [Macaca fascicularis]
Length = 226
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|397507212|ref|XP_003824099.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pan paniscus]
Length = 541
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF++M+ E AA+TMV Y+T+ LRG+ +Y+QFSNHK LKTD + + A
Sbjct: 96 QAFIKMSTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKGLKTDSSPNQA 145
>gi|449508136|ref|XP_002190438.2| PREDICTED: polypyrimidine tract-binding protein 2 [Taeniopygia
guttata]
Length = 537
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|440902651|gb|ELR53420.1| Polypyrimidine tract-binding protein 2, partial [Bos grunniens
mutus]
Length = 524
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 83 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 128
>gi|431896401|gb|ELK05813.1| Polypyrimidine tract-binding protein 2 [Pteropus alecto]
Length = 485
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 44 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 89
>gi|426330458|ref|XP_004026228.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3
[Gorilla gorilla gorilla]
Length = 548
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 107 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 152
>gi|4001819|gb|AAC94999.1| putative polypyrimidine tract-binding protein [Carassius auratus]
Length = 165
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQ 52
QAFLEMA E AA TMV Y+TT +R + VY+Q+SNH+ELKTD
Sbjct: 118 QAFLEMASEEAAITMVNYYTTATPLVRNQPVYIQYSNHRELKTDN 162
>gi|73959499|ref|XP_866820.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Canis lupus familiaris]
gi|119593416|gb|EAW73010.1| polypyrimidine tract binding protein 2, isoform CRA_f [Homo
sapiens]
Length = 480
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 44 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 89
>gi|9507003|ref|NP_062423.1| polypyrimidine tract-binding protein 2 [Mus musculus]
gi|8358154|gb|AAF21807.2|AF095718_1 RRM-type RNA-binding protein brPTB [Mus musculus]
gi|5824110|emb|CAB54073.1| PTB-like protein [Rattus rattus]
gi|22711857|tpg|DAA00061.1| TPA_exp: splicing regulator nPTB2 [Mus musculus]
gi|74209570|dbj|BAE23317.1| unnamed protein product [Mus musculus]
Length = 532
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|410967802|ref|XP_003990404.1| PREDICTED: polypyrimidine tract-binding protein 2 [Felis catus]
Length = 566
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 130 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 175
>gi|403283993|ref|XP_003933374.1| PREDICTED: polypyrimidine tract-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 141 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 186
>gi|395821711|ref|XP_003784180.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Otolemur garnettii]
Length = 531
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|395821709|ref|XP_003784179.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Otolemur garnettii]
Length = 540
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 104 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 149
>gi|390466248|ref|XP_003733548.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 2 [Callithrix jacchus]
Length = 499
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 104 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 149
>gi|355745467|gb|EHH50092.1| hypothetical protein EGM_00861, partial [Macaca fascicularis]
Length = 529
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 93 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 138
>gi|354504008|ref|XP_003514071.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cricetulus
griseus]
Length = 501
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 65 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 110
>gi|351704481|gb|EHB07400.1| Polypyrimidine tract-binding protein 2 [Heterocephalus glaber]
Length = 539
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|348586487|ref|XP_003479000.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cavia
porcellus]
Length = 581
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 145 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 190
>gi|345801647|ref|XP_003434832.1| PREDICTED: polypyrimidine tract-binding protein 2 [Canis lupus
familiaris]
Length = 540
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 104 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 149
>gi|344293564|ref|XP_003418492.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Loxodonta
africana]
Length = 686
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 245 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 290
>gi|332809593|ref|XP_003308280.1| PREDICTED: polypyrimidine tract-binding protein 2 [Pan troglodytes]
gi|397474051|ref|XP_003808504.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3 [Pan
paniscus]
Length = 548
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 107 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 152
>gi|332221975|ref|XP_003260140.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Nomascus leucogenys]
Length = 568
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 127 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 172
>gi|327270713|ref|XP_003220133.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Anolis
carolinensis]
Length = 531
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|326925087|ref|XP_003208753.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Meleagris
gallopavo]
Length = 531
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|297279326|ref|XP_001105013.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 2
[Macaca mulatta]
gi|332809591|ref|XP_001158089.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 7 [Pan
troglodytes]
gi|395730217|ref|XP_003775687.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pongo
abelii]
gi|397474049|ref|XP_003808503.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pan
paniscus]
gi|426330456|ref|XP_004026227.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 540
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 104 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 149
>gi|296489304|tpg|DAA31417.1| TPA: polypyrimidine tract binding protein 2-like [Bos taurus]
Length = 496
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 65 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 110
>gi|281349698|gb|EFB25282.1| hypothetical protein PANDA_003123 [Ailuropoda melanoleuca]
Length = 501
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 60 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 105
>gi|194389592|dbj|BAG61757.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 104 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 149
>gi|194389558|dbj|BAG61740.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 107 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 152
>gi|338725424|ref|XP_001490156.3| PREDICTED: polypyrimidine tract-binding protein 2 [Equus caballus]
gi|402855346|ref|XP_003892287.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Papio
anubis]
gi|194379976|dbj|BAG58340.1| unnamed protein product [Homo sapiens]
Length = 325
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 65 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 110
>gi|402855348|ref|XP_003892288.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Papio
anubis]
Length = 506
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 65 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 110
>gi|148680405|gb|EDL12352.1| polypyrimidine tract binding protein 2, isoform CRA_b [Mus
musculus]
Length = 529
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 93 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 138
>gi|148680404|gb|EDL12351.1| polypyrimidine tract binding protein 2, isoform CRA_a [Mus
musculus]
Length = 528
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 93 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 138
>gi|118094291|ref|XP_422322.2| PREDICTED: polypyrimidine tract-binding protein 2 [Gallus gallus]
Length = 531
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|16307418|gb|AAH10255.1| Polypyrimidine tract binding protein 2 [Mus musculus]
Length = 531
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|301758643|ref|XP_002915171.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Ailuropoda
melanoleuca]
gi|395730215|ref|XP_002810624.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pongo
abelii]
gi|22218304|gb|AAM94624.1| non-neuronal splice variant nPTB3 [Homo sapiens]
gi|119593414|gb|EAW73008.1| polypyrimidine tract binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 537
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|297279324|ref|XP_001105316.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 6
[Macaca mulatta]
gi|22218306|gb|AAM94625.1| non-neuronal splice variant nPTB4 [Homo sapiens]
gi|119593412|gb|EAW73006.1| polypyrimidine tract binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 536
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|53850638|ref|NP_001005555.1| polypyrimidine tract-binding protein 2 [Rattus norvegicus]
gi|81910658|sp|Q66H20.1|PTBP2_RAT RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=PTB-like protein
gi|93140675|sp|Q91Z31.2|PTBP2_MOUSE RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Brain-enriched polypyrimidine tract-binding
protein; Short=Brain-enriched PTB; AltName: Full=Neural
polypyrimidine tract-binding protein; AltName:
Full=RRM-type RNA-binding protein brPTB
gi|51859313|gb|AAH82076.1| Polypyrimidine tract binding protein 2 [Rattus norvegicus]
gi|149025819|gb|EDL82062.1| polypyrimidine tract binding protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 531
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|16580751|dbj|BAB71743.1| PTB-like protein S [Homo sapiens]
gi|119593415|gb|EAW73009.1| polypyrimidine tract binding protein 2, isoform CRA_e [Homo
sapiens]
Length = 356
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|16580749|dbj|BAB71742.1| PTB-like protein L [Homo sapiens]
gi|16741546|gb|AAH16582.1| Polypyrimidine tract binding protein 2 [Homo sapiens]
gi|119593413|gb|EAW73007.1| polypyrimidine tract binding protein 2, isoform CRA_c [Homo
sapiens]
gi|123980248|gb|ABM81953.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|157928112|gb|ABW03352.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|410216174|gb|JAA05306.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
gi|410328831|gb|JAA33362.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 532
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|10863997|ref|NP_067013.1| polypyrimidine tract-binding protein 2 [Homo sapiens]
gi|332221969|ref|XP_003260137.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Nomascus leucogenys]
gi|332809589|ref|XP_001157727.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
troglodytes]
gi|345801645|ref|XP_547270.3| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Canis
lupus familiaris]
gi|397474047|ref|XP_003808502.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
paniscus]
gi|426330454|ref|XP_004026226.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|74761983|sp|Q9UKA9.1|PTBP2_HUMAN RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=Neurally-enriched homolog of PTB; AltName:
Full=PTB-like protein
gi|6492336|gb|AAF14284.1|AF176085_1 neural polypyrimidine tract binding protein [Homo sapiens]
gi|22711855|tpg|DAA00060.1| TPA_exp: splicing regulator nPTB1 [Homo sapiens]
gi|119593411|gb|EAW73005.1| polypyrimidine tract binding protein 2, isoform CRA_a [Homo
sapiens]
gi|380815182|gb|AFE79465.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|384948520|gb|AFI37865.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|410298260|gb|JAA27730.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 531
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|25392158|pir||JC7526 polypyrimidine tract-binding protein-like protein - rat
Length = 532
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141
>gi|390458239|ref|XP_003732081.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Callithrix jacchus]
Length = 524
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAVTMVNYYTPFTPHLRSQPVYIQYSNHRELKTD 111
>gi|296190586|ref|XP_002743247.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Callithrix jacchus]
Length = 558
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 102 QAFLEMASEEAAVTMVNYYTPFTPHLRSQPVYIQYSNHRELKTD 145
>gi|223647466|gb|ACN10491.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 540
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+ E AA TMV Y+T + Q+R V++QFSNHKELKTD T
Sbjct: 89 QAFLELGTEEAAVTMVNYYTAVMPQVRNVPVFIQFSNHKELKTDST 134
>gi|224087659|ref|XP_002196400.1| PREDICTED: polypyrimidine tract-binding protein 1 [Taeniopygia
guttata]
Length = 525
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E A+TMV Y+TT LR + +Y+QFSNHKELKTD +
Sbjct: 66 QAFIEMNTEETANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNS 111
>gi|355702910|gb|EHH29401.1| hypothetical protein EGK_09820, partial [Macaca mulatta]
Length = 555
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+EM E AA+TMV Y+T+ LRG+ +Y+QFSNHK LKTD +
Sbjct: 94 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKGLKTDSS 139
>gi|338720439|ref|XP_001490810.2| PREDICTED: regulator of differentiation 1 isoform 1 [Equus
caballus]
Length = 523
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD + A
Sbjct: 67 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTDNLPNQA 116
>gi|62088112|dbj|BAD92503.1| polypyrimidine tract binding protein 2 variant [Homo sapiens]
Length = 177
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 118 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 163
>gi|148700268|gb|EDL32215.1| mCG50057 [Mus musculus]
Length = 253
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF EM E A+TMV Y+T+ LRG+ +Y+QFSNHKEL+TD +
Sbjct: 106 QAFTEMNTEETANTMVNYYTSVAPVLRGQPIYIQFSNHKELETDSS 151
>gi|426219707|ref|XP_004004060.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Ovis
aries]
Length = 526
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTD 111
>gi|355717047|gb|AES05805.1| ROD1 regulator of differentiation 1 [Mustela putorius furo]
Length = 497
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD
Sbjct: 42 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTD 85
>gi|345330029|ref|XP_003431460.1| PREDICTED: regulator of differentiation 1-like [Ornithorhynchus
anatinus]
Length = 670
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD
Sbjct: 94 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTD 137
>gi|334332915|ref|XP_001376108.2| PREDICTED: regulator of differentiation 1 [Monodelphis domestica]
Length = 582
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD
Sbjct: 126 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTD 169
>gi|301781136|ref|XP_002925987.1| PREDICTED: regulator of differentiation 1-like [Ailuropoda
melanoleuca]
Length = 567
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD
Sbjct: 111 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTD 154
>gi|281345981|gb|EFB21565.1| hypothetical protein PANDA_015565 [Ailuropoda melanoleuca]
Length = 444
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD
Sbjct: 57 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTD 100
>gi|116175255|ref|NP_001070683.1| regulator of differentiation 1 [Sus scrofa]
gi|115371761|gb|ABI96205.1| ROD1 [Sus scrofa]
Length = 523
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD
Sbjct: 65 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTD 108
>gi|334324359|ref|XP_001381834.2| PREDICTED: polypyrimidine tract-binding protein 2-like [Monodelphis
domestica]
Length = 640
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E +A TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 199 QAFLELATEESAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 244
>gi|58331982|ref|NP_001011140.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|54261503|gb|AAH84469.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|89272472|emb|CAJ82472.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 554
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E AA+TM+ Y+T LR + +Y+Q+SNHKELKTD +
Sbjct: 99 QAFLEMNTEEAANTMINYYTNVAPVLRSQPIYIQYSNHKELKTDNS 144
>gi|431918462|gb|ELK17686.1| Regulator of differentiation 1 [Pteropus alecto]
Length = 523
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + +++Q+SNH+ELKTD
Sbjct: 67 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPIFIQYSNHRELKTD 110
>gi|291398459|ref|XP_002715890.1| PREDICTED: polypyrimidine tract binding protein 2 [Oryctolagus
cuniculus]
Length = 536
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+A E AA TMV Y++ LR + +++Q+SNHKELKTD T
Sbjct: 96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIFIQYSNHKELKTDNT 141
>gi|432091564|gb|ELK24589.1| Regulator of differentiation 1 [Myotis davidii]
Length = 524
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + +++Q+SNH+ELKTD
Sbjct: 68 QAFLEMASEEAAITMVNYYTPVTPHLRSQPIFIQYSNHRELKTD 111
>gi|417411514|gb|JAA52191.1| Putative polypyrimidine tract-binding protein, partial [Desmodus
rotundus]
Length = 541
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA TMV Y+T LR + +++Q+SNH+ELKTD
Sbjct: 85 QAFLEMASEEAAITMVNYYTPVTPHLRSQPIFIQYSNHRELKTD 128
>gi|380801045|gb|AFE72398.1| regulator of differentiation 1 isoform 1, partial [Macaca
mulatta]
Length = 456
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 9 AFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
AFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 1 AFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 43
>gi|193786069|dbj|BAG50959.1| unnamed protein product [Homo sapiens]
Length = 457
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 9 AFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
AFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 2 AFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 44
>gi|349732186|ref|NP_001231825.1| polypyrimidine tract-binding protein 3 isoform 4 [Homo sapiens]
gi|332832555|ref|XP_001149256.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
troglodytes]
Length = 457
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 9 AFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
AFLEMA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 2 AFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 44
>gi|395535423|ref|XP_003769725.1| PREDICTED: polypyrimidine tract-binding protein 2 [Sarcophilus
harrisii]
Length = 494
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
+AFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKTD T
Sbjct: 58 EAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 103
>gi|148224882|ref|NP_001080169.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|28278766|gb|AAH45068.1| Ptbp1 protein [Xenopus laevis]
Length = 547
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E AA+T++ Y++ LRG+ +Y+Q+SNHKELKTD +
Sbjct: 93 QAFLEMNTEEAANTIINYYSNVAPVLRGQPIYIQYSNHKELKTDNS 138
>gi|354508326|ref|XP_003516204.1| PREDICTED: polypyrimidine tract-binding protein 1-like, partial
[Cricetulus griseus]
Length = 214
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
Q F+EM E A+TMV Y+ + LRG+ +Y+QFSNHKELKTD +
Sbjct: 95 QPFIEMNTEEVANTMVNYYMSLAPVLRGQPIYLQFSNHKELKTDNS 140
>gi|390332437|ref|XP_003723500.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 649
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE A T + ++T + GR +Y QFS HKELKTD H+
Sbjct: 101 QAFLEMADEATAQTFINHYTHMPRNVHGRQIYCQFSKHKELKTDFAHT 148
>gi|348505292|ref|XP_003440195.1| PREDICTED: regulator of differentiation 1 [Oreochromis niloticus]
Length = 514
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMA E AA TMV Y+T+ +R + VY+Q+S H+ELKTD S
Sbjct: 79 QAFLEMASEEAAVTMVNYYTSATPSIRSQPVYIQYSTHRELKTDNMTS 126
>gi|115634663|ref|XP_001176080.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 617
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE A T + ++T + GR +Y QFS HKELKTD H+
Sbjct: 148 QAFLEMADEATAQTFINHYTHMPRNVHGRQIYCQFSKHKELKTDFAHT 195
>gi|85003003|gb|ABC68595.1| polypyrimidine tract binding protein [Paracentrotus lividus]
Length = 618
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE A T + ++T + GR +Y QFS HKELKTD H+
Sbjct: 146 QAFLEMADEATAQTFINHYTHMPRNVHGRQIYCQFSKHKELKTDFAHT 193
>gi|338720441|ref|XP_003364168.1| PREDICTED: regulator of differentiation 1 isoform 2 [Equus
caballus]
Length = 457
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 9 AFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
AFLEMA E AA TMV Y+T LR + V++Q+SNH+ELKTD + A
Sbjct: 2 AFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTDNLPNQA 50
>gi|390332444|ref|XP_003723502.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 5
[Strongylocentrotus purpuratus]
Length = 555
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE A T + ++T + GR +Y QFS HKELKTD H+
Sbjct: 120 QAFLEMADEATAQTFINHYTHMPRNVHGRQIYCQFSKHKELKTDFAHT 167
>gi|390332442|ref|XP_003723501.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 4
[Strongylocentrotus purpuratus]
Length = 662
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE A T + ++T + GR +Y QFS HKELKTD H+
Sbjct: 148 QAFLEMADEATAQTFINHYTHMPRNVHGRQIYCQFSKHKELKTDFAHT 195
>gi|390332435|ref|XP_003723499.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 631
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE A T + ++T + GR +Y QFS HKELKTD H+
Sbjct: 83 QAFLEMADEATAQTFINHYTHMPRNVHGRQIYCQFSKHKELKTDFAHT 130
>gi|348522752|ref|XP_003448888.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 654
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E AA +V Y++T V +R VYVQFSNHKELKTD +
Sbjct: 213 QAFLEMNSEEAAQNLVGYYSTMVPIIRHHPVYVQFSNHKELKTDNS 258
>gi|187608032|ref|NP_001120518.1| polypyrimidine tract binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|170287806|gb|AAI61422.1| LOC100145652 protein [Xenopus (Silurana) tropicalis]
Length = 519
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEMA E AA +MV Y+T +R + VY+Q+SNH+ELKTD
Sbjct: 65 QAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTD 108
>gi|390332446|ref|XP_003723503.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 6
[Strongylocentrotus purpuratus]
Length = 603
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE A T + ++T + GR +Y QFS HKELKTD H+
Sbjct: 89 QAFLEMADEATAQTFINHYTHMPRNVHGRQIYCQFSKHKELKTDFAHT 136
>gi|390332439|ref|XP_780392.3| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 7
[Strongylocentrotus purpuratus]
Length = 659
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAFLEMADE A T + ++T + GR +Y QFS HKELKTD H+
Sbjct: 111 QAFLEMADEATAQTFINHYTHMPRNVHGRQIYCQFSKHKELKTDFAHT 158
>gi|348531446|ref|XP_003453220.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 523
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLE+ E AA TMV Y+T Q+R V++Q+SNHKELKTD
Sbjct: 82 QAFLELGTEEAAVTMVNYYTAVTPQVRNTPVFIQYSNHKELKTD 125
>gi|159163853|pdb|2CQ1|A Chain A, Solution Structure Of Rna Binding Domain In Ptb-Like
Protein L
Length = 101
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
QAFLE+A E AA TMV Y++ LR + +Y+Q+SNHKELKT S
Sbjct: 53 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTSGPSSG 101
>gi|432915659|ref|XP_004079197.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 523
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLE+ E AA TMV Y+T Q+R V++Q+SNHKELKTD
Sbjct: 82 QAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHKELKTD 125
>gi|169790993|ref|NP_001116126.1| polypyrimidine tract binding protein-like [Danio rerio]
Length = 564
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E AA TMVTY+++ +R +++Q+SNHKELKTD +
Sbjct: 108 QAFLEMNSEEAAQTMVTYYSSVTPVIRNHPIFMQYSNHKELKTDNS 153
>gi|61403202|gb|AAH91854.1| Ptbp1b protein [Danio rerio]
Length = 586
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E AA TMVTY+++ +R +++Q+SNHKELKTD +
Sbjct: 130 QAFLEMNSEEAAQTMVTYYSSVTPVIRNHPIFMQYSNHKELKTDNS 175
>gi|410928343|ref|XP_003977560.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Takifugu
rubripes]
Length = 534
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E AA MV Y++T + +R + VYVQFSNHKELKTD +
Sbjct: 87 QAFLEMNCEDAACNMVGYYSTVMPVIRHQPVYVQFSNHKELKTDNS 132
>gi|157838029|ref|NP_001093477.1| polypyrimidine tract-binding protein 2 [Danio rerio]
Length = 538
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLE+ E AA TMV Y+T Q+R V++Q+SNHKELKTD
Sbjct: 91 QAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELKTD 134
>gi|47218405|emb|CAG12676.1| unnamed protein product [Tetraodon nigroviridis]
Length = 582
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 7 IQAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
+QAFLEM E AA TMV Y+ T +R V++Q+SNHKELKTD
Sbjct: 107 LQAFLEMGTEEAAITMVNYYATVTPHVRNVPVFIQYSNHKELKTD 151
>gi|363744882|ref|XP_424912.3| PREDICTED: regulator of differentiation 1 [Gallus gallus]
Length = 552
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAFLEMA E A +MV Y +T + + + VYVQ+SNH+ELKTD S A
Sbjct: 114 QAFLEMASEENAVSMVNYCSTAIPHIHNQPVYVQYSNHRELKTDSLPSQA 163
>gi|213513374|ref|NP_001133504.1| polypyrimidine tract-binding protein 2 [Salmo salar]
gi|209154262|gb|ACI33363.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 520
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAFLE+ E AA TMV Y++T +R V++Q+SNHKELKTD + A
Sbjct: 95 QAFLELGTEEAAITMVNYYSTVTPHVRNVPVFIQYSNHKELKTDAGNQRA 144
>gi|410933304|ref|XP_003980031.1| PREDICTED: polypyrimidine tract-binding protein 2-like, partial
[Takifugu rubripes]
Length = 345
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAFLEM E AA TMV Y+ T +R V++Q+SNHKELKTD
Sbjct: 67 QAFLEMGTEEAAITMVNYYATVTPHVRNIPVFIQYSNHKELKTD 110
>gi|395745998|ref|XP_003778369.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pongo abelii]
Length = 551
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+E+ E AA+T+ Y+T+ LRG+ +Y+QFSNHK LKTD + + A
Sbjct: 96 QAFIELRTEGAANTVENYYTSVTPVLRGQPIYIQFSNHKGLKTDSSPNQA 145
>gi|375073695|gb|AFA34406.1| polypirimidine tract binding 2 protein, partial [Ostrea edulis]
Length = 142
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 11 LEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
LE DE A TMV++ AQ+R + VYVQFSNHKELKTDQ +S
Sbjct: 1 LEFLDEQAGVTMVSFHQQNPAQIRMKPVYVQFSNHKELKTDQANS 45
>gi|410904361|ref|XP_003965660.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Takifugu
rubripes]
Length = 481
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
Q FLEMA E AA TM+ Y+T+ +R + V++Q+SNH+ELKTD
Sbjct: 64 QGFLEMASEEAAVTMMNYYTSAPPTIRNQPVFIQYSNHRELKTD 107
>gi|66472746|ref|NP_001018313.1| polypyrimidine tract binding protein 1a [Danio rerio]
gi|63100731|gb|AAH95372.1| Polypyrimidine tract binding protein 1a [Danio rerio]
Length = 574
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM E +A TMV+Y+++ +R +++Q+SNHKELKTD +
Sbjct: 111 QAFLEMNTEESAQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNS 156
>gi|348540154|ref|XP_003457553.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 511
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHLTIGII 67
QAFLEM E AA TMV Y++ +R V++Q+SNHKELKTD + + +
Sbjct: 90 QAFLEMGTEEAAVTMVNYYSKVTPLIRNIQVFIQYSNHKELKTDAANQRTQAVLQAVSAA 149
Query: 68 LRPATHYQ 75
P + Q
Sbjct: 150 QSPGSEVQ 157
>gi|391330010|ref|XP_003739458.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Metaseiulus
occidentalis]
Length = 588
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 8 QAFLEMADECAASTMVTYF--TTCVAQLRGRAVYVQFSNHKELKTDQTHSNALL 59
QAFLEM E +A MV YF T+ Q+RGR +YVQ SNH+ELK + LL
Sbjct: 144 QAFLEMETEVSAGQMVEYFAKTSSPPQIRGRTIYVQQSNHRELKVNDNGHGMLL 197
>gi|198435860|ref|XP_002127727.1| PREDICTED: similar to polypyrimidine tract binding protein 1 [Ciona
intestinalis]
Length = 516
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM DE A+ MV+ +R R +YVQFSNHKELKTD +
Sbjct: 79 QAFLEMEDEEIANQMVSSSGISPPTIRQRIIYVQFSNHKELKTDSS 124
>gi|348510807|ref|XP_003442936.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 575
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+ E A TMV+Y+++ +R +Y+Q+S HKELKTD +
Sbjct: 109 QAFLELNSEECAQTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNS 154
>gi|432936644|ref|XP_004082208.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oryzias
latipes]
Length = 577
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE E A TMV+Y+++ +R +Y+Q+S HKELKTD +
Sbjct: 110 QAFLEFGSEECAQTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNS 155
>gi|410897873|ref|XP_003962423.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Takifugu rubripes]
Length = 577
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+ E A TMV Y+++ +R +Y+Q+S HKELKTD +
Sbjct: 111 QAFLELNSEECAQTMVNYYSSVTPYIRNHPIYMQYSTHKELKTDNS 156
>gi|410897871|ref|XP_003962422.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Takifugu rubripes]
Length = 575
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLE+ E A TMV Y+++ +R +Y+Q+S HKELKTD +
Sbjct: 109 QAFLELNSEECAQTMVNYYSSVTPYIRNHPIYMQYSTHKELKTDNS 154
>gi|47209150|emb|CAF89890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 569
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
Q FLEMA E AA TM+ Y+T+ +R + V++Q+S H+ELKTD
Sbjct: 45 QGFLEMASEEAAITMMNYYTSAPPTIRNQPVFIQYSTHRELKTD 88
>gi|223647470|gb|ACN10493.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM A TMV Y+ T +R + V++Q+SNHKELKTD +
Sbjct: 100 QAFLEMNTVDQAQTMVNYYATVTPLIRQQPVFMQYSNHKELKTDNS 145
>gi|213513392|ref|NP_001133760.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
gi|209155238|gb|ACI33851.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM A TMV Y+ T +R + V++Q+SNHKELKTD +
Sbjct: 100 QAFLEMNTVDQAQTMVNYYATVTPLIRQQPVFMQYSNHKELKTDNS 145
>gi|224089408|ref|XP_002188238.1| PREDICTED: polypyrimidine tract-binding protein 3 [Taeniopygia
guttata]
Length = 488
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAFLEMA AA +MV Y+ L + VY+Q+S +KEL+TD H+ A
Sbjct: 63 QAFLEMASIDAAVSMVNYYAPATPHLHHQPVYIQYSKYKELRTDNQHNQA 112
>gi|90085391|dbj|BAE91436.1| unnamed protein product [Macaca fascicularis]
Length = 352
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 13 MADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
MA E AA TMV Y+T LR + VY+Q+SNH+ELKTD
Sbjct: 1 MASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTD 39
>gi|413949172|gb|AFW81821.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 339
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 128 QALLQMEDLHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 173
>gi|359493141|ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
[Vitis vinifera]
Length = 445
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT---------DQTHSNAL 58
QA L+M D +A+ + ++T +RGR VYVQFS+H+EL T D+ N +
Sbjct: 43 QALLQMQDVPSAANAMQFYTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEVSPNRI 102
Query: 59 LLHLTIGIILRPATHYQVHLIRS 81
LL +TI +L P T +H + S
Sbjct: 103 LL-VTIHHLLYPITVEVLHQVFS 124
>gi|293335567|ref|NP_001169470.1| uncharacterized protein LOC100383343 [Zea mays]
gi|224029557|gb|ACN33854.1| unknown [Zea mays]
Length = 444
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 43 QALLQMEDLHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 88
>gi|413949171|gb|AFW81820.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 529
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 128 QALLQMEDLHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 173
>gi|242090663|ref|XP_002441164.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
gi|241946449|gb|EES19594.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
Length = 444
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 43 QALLQMEDIHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 88
>gi|357126039|ref|XP_003564696.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 443
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA ++M D A+ + + Y+TT +RGR VY+Q+S+H+EL TDQ+
Sbjct: 43 QALVQMEDLAASVSAIQYYTTIQPSVRGRNVYLQYSSHQELTTDQS 88
>gi|413922344|gb|AFW62276.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 458
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 115
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ T +HL+ SA
Sbjct: 116 FE-GVQPNDVTIEVIHLVFSA 135
>gi|413922343|gb|AFW62275.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 462
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 115
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ T +HL+ SA
Sbjct: 116 FE-GVQPNDVTIEVIHLVFSA 135
>gi|242079253|ref|XP_002444395.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
gi|241940745|gb|EES13890.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
Length = 462
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 115
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ T +HL+ SA
Sbjct: 116 FE-GVQPNDVTIEVIHLVFSA 135
>gi|33414511|ref|NP_877970.1| polypyrimidine tract-binding protein [Rattus norvegicus]
gi|29824910|gb|AAO92353.1| SMPTB [Rattus norvegicus]
gi|149028489|gb|EDL83874.1| polypyrimidine tract-binding protein [Rattus norvegicus]
Length = 588
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLL 60
QAF+EM+ E +A+TM+ Y+T LRG+ V++QF++++ELK + S + L
Sbjct: 66 QAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISL 118
>gi|300681488|emb|CBH32582.1| RNA recognition domain containing protein,expressed [Triticum
aestivum]
Length = 439
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA ++M D A+ + + Y+TT +RGR VY+Q+S+H+EL TDQ+
Sbjct: 43 QALVQMEDLSASISAIQYYTTIQPSVRGRNVYLQYSSHQELTTDQS 88
>gi|219363125|ref|NP_001137030.1| uncharacterized protein LOC100217199 [Zea mays]
gi|194698066|gb|ACF83117.1| unknown [Zea mays]
gi|414870440|tpg|DAA48997.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 296
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 115
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ T +HL+ SA
Sbjct: 116 FE-GVQPNDVTIEVIHLVFSA 135
>gi|357133525|ref|XP_003568375.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 444
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA L+M D ++ + + Y+TT +RGR +Y+QFS+H+EL TDQ+
Sbjct: 43 QALLQMQDIHSSVSALQYYTTVQPSVRGRNIYMQFSSHQELTTDQS 88
>gi|340375863|ref|XP_003386453.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Amphimedon
queenslandica]
Length = 476
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAF+E+A+ A +V F+T AQ++ R VY+QFS H+ELK+ T
Sbjct: 58 QAFVELAELSTACALVDAFSTRPAQIKDRTVYIQFSKHQELKSGST 103
>gi|296082547|emb|CBI21552.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT----------DQTHSNA 57
QA L+M D +A + + Y+ +RGR VYVQFS+H+EL T DQ
Sbjct: 43 QALLQMQDVASAVSALQYYANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPN 102
Query: 58 LLLHLTIGIILRPATHYQVHLIRS 81
+L +TI +L P T +H + S
Sbjct: 103 RILLVTIHHLLYPITVEVLHQVFS 126
>gi|294460075|gb|ADE75620.1| unknown [Picea sitchensis]
Length = 471
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-----------DQTHSN 56
QA L+M AA + Y++T +RGR VY+QFS+H+EL T DQ
Sbjct: 43 QALLQMHHVSAAIDALQYYSTVQPSVRGRNVYIQFSSHQELTTVEHPTHARQSGDQDSQP 102
Query: 57 ALLLHLTIGIILRPATHYQVHLIRSAC 83
+L +TI +L P T +H + S C
Sbjct: 103 NRILLVTIHHLLFPITVEVLHQVFSPC 129
>gi|222619594|gb|EEE55726.1| hypothetical protein OsJ_04208 [Oryza sativa Japonica Group]
Length = 309
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA ++M D +A ++ Y+ T +RGR VY+Q+S+H+EL TDQ+
Sbjct: 43 QALVQMEDLASAVNVIQYYNTIQPSVRGRNVYLQYSSHQELTTDQS 88
>gi|414870439|tpg|DAA48996.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 314
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 115
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ T +HL+ SA
Sbjct: 116 FE-GVQPNDVTIEVIHLVFSA 135
>gi|357119737|ref|XP_003561590.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Brachypodium distachyon]
Length = 522
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 60 QAFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVT 119
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +HL+ SA
Sbjct: 120 IE-GVQASDVTIDVIHLVFSA 139
>gi|326511767|dbj|BAJ92028.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 60 QAFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVT 119
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +HL+ SA
Sbjct: 120 IE-GVQASDVTIDVIHLVFSA 139
>gi|300681487|emb|CBH32581.1| RNA recognition domain containing protein [Triticum aestivum]
Length = 277
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA ++M D A+ + + Y+TT +RGR VY+Q+S+H+EL TDQ+
Sbjct: 43 QALVQMEDLSASISAIQYYTTIQPSVRGRNVYLQYSSHQELTTDQS 88
>gi|115453245|ref|NP_001050223.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|18921326|gb|AAL82531.1|AC084766_17 putative polypyrimidine tract-binding protein [Oryza sativa
Japonica Group]
gi|108708433|gb|ABF96228.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113548694|dbj|BAF12137.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|215692946|dbj|BAG88366.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192927|gb|EEC75354.1| hypothetical protein OsI_11790 [Oryza sativa Indica Group]
gi|222625006|gb|EEE59138.1| hypothetical protein OsJ_11035 [Oryza sativa Japonica Group]
Length = 464
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 60 QAFVEFTDINQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIVNNKSPGETAGNVLLVT 119
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +HL+ SA
Sbjct: 120 IE-GVQANDVTIDVIHLVFSA 139
>gi|334702289|gb|AEG89704.1| polypyrimidine tract-binding protein 6 [Solanum tuberosum]
Length = 444
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA L+M D AA + +++ +RGR+VYVQFS+H+EL T DQ N +LL
Sbjct: 43 QALLQMQDIAAAVNAMQFYSNVQPSIRGRSVYVQFSSHQELTTVDQNAQGRGDEPNRILL 102
Query: 61 HLTIGIILRPATHYQVHLIRS 81
++I +L P T +H + S
Sbjct: 103 -VSIHHVLYPITVEVLHQVFS 122
>gi|218189437|gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indica Group]
Length = 443
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA ++M D +A ++ Y+ T +RGR VY+Q+S+H+EL TDQ+
Sbjct: 43 QALVQMEDLASAVNVIQYYNTIQPSVRGRNVYLQYSSHQELTTDQS 88
>gi|296081200|emb|CBI18226.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA L+M D +A+ + ++T +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 43 QALLQMQDVPSAANAMQFYTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEPNRILL 102
Query: 61 HLTIGIILRPATHYQVHLIRS 81
+TI +L P T +H + S
Sbjct: 103 -VTIHHLLYPITVEVLHQVFS 122
>gi|221126625|ref|XP_002156158.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Hydra
magnipapillata]
Length = 494
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSN 56
QAFLE+ D A TM+ Y+T +R + V++QFS H+EL+T+ +++
Sbjct: 69 QAFLELQDVDCAKTMINYYTYVSPTIRNQPVFLQFSQHQELRTNNQNNH 117
>gi|359493143|ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
[Vitis vinifera]
Length = 432
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA L+M D +A+ + ++T +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 43 QALLQMQDVPSAANAMQFYTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEPNRILL 102
Query: 61 HLTIGIILRPATHYQVHLIRS 81
+TI +L P T +H + S
Sbjct: 103 -VTIHHLLYPITVEVLHQVFS 122
>gi|413933762|gb|AFW68313.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 251
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 5 DEIQAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
++ Q L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 42 NQAQTLLQMEDIHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 90
>gi|168017642|ref|XP_001761356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687362|gb|EDQ73745.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT 53
QA L+M D +A ++ Y+TT +RGR VY+QFS+HKEL T DQ
Sbjct: 43 QALLQMQDVPSAINVMQYYTTVQPSVRGRNVYMQFSSHKELTTPDQN 89
>gi|413933765|gb|AFW68316.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945517|gb|AFW78166.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 128
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
Q L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 43 QTLLQMEDIHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 88
>gi|414870438|tpg|DAA48995.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 140
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTC--VAQLRGRAVYVQFSNHKEL----KTDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 115
Query: 62 LTIGIILRPATHYQVHLIRSACQVYL 87
G+ T +HL+ + +Y+
Sbjct: 116 FE-GVQPNDVTIEVIHLVSFSIYMYV 140
>gi|359480735|ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Vitis vinifera]
Length = 448
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT----------DQTHSNA 57
QA L+M D +A + + Y+ +RGR VYVQFS+H+EL T DQ
Sbjct: 43 QALLQMQDVASAVSALQYYANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPN 102
Query: 58 LLLHLTIGIILRPATHYQVHLIRS 81
+L +TI +L P T +H + S
Sbjct: 103 RILLVTIHHLLYPITVEVLHQVFS 126
>gi|359480737|ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Vitis vinifera]
Length = 412
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT----------DQTHSNA 57
QA L+M D +A + + Y+ +RGR VYVQFS+H+EL T DQ
Sbjct: 7 QALLQMQDVASAVSALQYYANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPN 66
Query: 58 LLLHLTIGIILRPATHYQVHLIRS 81
+L +TI +L P T +H + S
Sbjct: 67 RILLVTIHHLLYPITVEVLHQVFS 90
>gi|54290862|dbj|BAD61523.1| polypyrimidine tract-binding protein 1-like [Oryza sativa Japonica
Group]
gi|125571201|gb|EAZ12716.1| hypothetical protein OsJ_02633 [Oryza sativa Japonica Group]
gi|215740848|dbj|BAG97004.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKEL----KTDQTHSNALLLH 61
QAF+E AD+ A M++YF + AQ+RG+ VY+Q+SN +E+ + + N LL+
Sbjct: 55 QAFVEFADQNQAIAMISYFASSAEPAQVRGKNVYLQYSNRQEIVNSKSSGEAAGNVLLVS 114
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G++ + +HL+ SA
Sbjct: 115 ME-GVLPDAVSIDVLHLVFSA 134
>gi|147856398|emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
Length = 476
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT----------DQTHSNA 57
QA L+M D +A + + Y+ +RGR VYVQFS+H+EL T DQ
Sbjct: 43 QALLQMQDVASAVSALQYYANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPN 102
Query: 58 LLLHLTIGIILRPATHYQVHLIRS 81
+L +TI +L P T +H + S
Sbjct: 103 RILLVTIHHLLYPITVEVLHQVFS 126
>gi|357130514|ref|XP_003566893.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Brachypodium distachyon]
Length = 544
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNAL--LLHLT 63
QAF+E AD+ A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++ +A +L +T
Sbjct: 56 QAFIEFADQNQAIAMISYYASSAEPAQVRGKNVYLQYSNRQEIVNSKSTGDAAGNVLLVT 115
Query: 64 IGIILRPATHYQV-HLIRSA 82
+ +L A V HL+ SA
Sbjct: 116 MEGVLPDAVSIDVLHLVFSA 135
>gi|413945516|gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
Q L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 43 QTLLQMEDIHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 88
>gi|413933763|gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 445
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
Q L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 43 QTLLQMEDIHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 88
>gi|413933764|gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945515|gb|AFW78164.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
Q L+M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 43 QTLLQMEDIHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 88
>gi|326494672|dbj|BAJ94455.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528325|dbj|BAJ93344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 55 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 114
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ + +HL+ SA
Sbjct: 115 FE-GVQPNDVSIDVIHLVFSA 134
>gi|414867006|tpg|DAA45563.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 504
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 58 QAFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVT 117
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +H++ SA
Sbjct: 118 IE-GVQASDVTIDVIHMVFSA 137
>gi|268532214|ref|XP_002631235.1| C. briggsae CBR-PTB-1 protein [Caenorhabditis briggsae]
Length = 610
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAF+E +E +A+ VT T Q+RGR ++ Q+S H+ELK D+++
Sbjct: 154 QAFVEYEEETSAAAFVTGMTAVPIQIRGRTLFAQYSTHRELKFDKSN 200
>gi|357497749|ref|XP_003619163.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494178|gb|AES75381.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 318
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTHS-----NALLLH 61
QA ++M D +A + + ++ +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 7 QALVQMQDVASADSAIQFYINSQPSIRGRNVYVQFSSHRELTTMDQNQGREDEPNRILL- 65
Query: 62 LTIGIILRPAT 72
+T+ +L P T
Sbjct: 66 VTVHQVLYPMT 76
>gi|357497747|ref|XP_003619162.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494177|gb|AES75380.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 354
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTHS-----NALLLH 61
QA ++M D +A + + ++ +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 43 QALVQMQDVASADSAIQFYINSQPSIRGRNVYVQFSSHRELTTMDQNQGREDEPNRILL- 101
Query: 62 LTIGIILRPAT 72
+T+ +L P T
Sbjct: 102 VTVHQVLYPMT 112
>gi|354498135|ref|XP_003511171.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
gi|344255182|gb|EGW11286.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 575
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QA +EM+ E A+ MV Y+T LRG+ +++QFS++KELK + S
Sbjct: 66 QALMEMSTEENANAMVNYYTWVTPVLRGQPIHIQFSHYKELKVSRPRS 113
>gi|115476578|ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|42407521|dbj|BAD10638.1| putative polypyrimidine tract-binding protein homolog [Oryza sativa
Japonica Group]
gi|113623854|dbj|BAF23799.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|215695278|dbj|BAG90469.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640621|gb|EEE68753.1| hypothetical protein OsJ_27445 [Oryza sativa Japonica Group]
Length = 461
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 115
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ + +HL+ SA
Sbjct: 116 FE-GVQPNDISIDVIHLVFSA 135
>gi|218201199|gb|EEC83626.1| hypothetical protein OsI_29352 [Oryza sativa Indica Group]
Length = 461
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 115
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ + +HL+ SA
Sbjct: 116 FE-GVQPNDISIDVIHLVFSA 135
>gi|198434994|ref|XP_002131704.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 2 [Ciona intestinalis]
Length = 495
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM + A MV +R R +YVQ+SNHKELKTD +
Sbjct: 81 QAFLEMENSEVAREMVNECAISPPTIRQRVLYVQYSNHKELKTDSS 126
>gi|224135279|ref|XP_002322027.1| predicted protein [Populus trichocarpa]
gi|222869023|gb|EEF06154.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++A +LL
Sbjct: 57 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADAGGNVLLIT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 IEGADARLVSIDVLHLVFSA 136
>gi|223972751|gb|ACN30563.1| unknown [Zea mays]
gi|223973771|gb|ACN31073.1| unknown [Zea mays]
Length = 487
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 58 QAFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVT 117
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +H++ SA
Sbjct: 118 IE-GVQSSDVTIDVIHMVFSA 137
>gi|226495275|ref|NP_001151769.1| polypyrimidine tract-binding protein [Zea mays]
gi|195649587|gb|ACG44261.1| polypyrimidine tract-binding protein [Zea mays]
Length = 487
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 58 QAFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVT 117
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +H++ SA
Sbjct: 118 IE-GVQSSDVTIDVIHMVFSA 137
>gi|312107424|ref|XP_003150915.1| hypothetical protein LOAG_15376 [Loa loa]
gi|307753920|gb|EFO13154.1| hypothetical protein LOAG_15376, partial [Loa loa]
Length = 121
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT------DQTHSNALLLH 61
QAF+E DE +A T+VT C +R R ++ QFS H+ELKT D SN ++ H
Sbjct: 58 QAFVEYEDERSAQTLVTVNIACPVAIRDRTIFCQFSTHQELKTNHHLRADSNRSNLIIDH 117
>gi|198434992|ref|XP_002131695.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 1 [Ciona intestinalis]
Length = 528
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QAFLEM + A MV +R R +YVQ+SNHKELKTD +
Sbjct: 81 QAFLEMENSEVAREMVNECAISPPTIRQRVLYVQYSNHKELKTDSS 126
>gi|357147881|ref|XP_003574527.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Brachypodium distachyon]
Length = 459
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLL 60
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 55 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLV 113
>gi|326506386|dbj|BAJ86511.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLLH 61
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 55 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVT 114
Query: 62 LTIGIILRPATHYQVHLIRSA 82
G+ + +HL+ SA
Sbjct: 115 FE-GVQPNDVSIDVIHLVFSA 134
>gi|242040789|ref|XP_002467789.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
gi|241921643|gb|EER94787.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
Length = 486
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 58 QAFVEFTDVNQAIAMVSYFASSSEPAQIRGKPVYIQYSNRQEIVNNKSPGETAGNVLLVT 117
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +H++ SA
Sbjct: 118 ME-GVQASDVTIDVIHMVFSA 137
>gi|294461205|gb|ADE76165.1| unknown [Picea sitchensis]
Length = 461
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-----------DQTHSN 56
QA ++M D +A T++ +++T +RGR VY+QFS+H+EL T DQ
Sbjct: 43 QALMQMNDIPSAITVLDHYSTVQPSIRGRNVYIQFSSHQELTTTEQSGQARRNGDQDSQP 102
Query: 57 ALLLHLTIGIILRPATHYQVHLIRS 81
+L +TI +L P T +H + S
Sbjct: 103 NRILLVTIHHLLYPITVEVLHQVFS 127
>gi|302782650|ref|XP_002973098.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
gi|302790002|ref|XP_002976769.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300155807|gb|EFJ22438.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300158851|gb|EFJ25472.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
Length = 436
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT------------DQTHS 55
QA L+M D AA + + Y+T+ +RGR VY+QFS+H+EL T DQ
Sbjct: 43 QALLQMQDVNAAISAMQYYTSVQPSVRGRNVYIQFSSHQELTTSDQATQPRRPAGDQDQQ 102
Query: 56 NALLLHLTIGIILRPATHYQVHLI 79
+L +TI L P T +H +
Sbjct: 103 PNRILLVTIHHPLYPITVDVLHQV 126
>gi|108708434|gb|ABF96229.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 318
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTC--VAQLRGRAVYVQFSNHKEL----KTDQTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ +T N LL+
Sbjct: 60 QAFVEFTDINQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIVNNKSPGETAGNVLLVT 119
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +HL+ SA
Sbjct: 120 IE-GVQANDVTIDVIHLVFSA 139
>gi|115464105|ref|NP_001055652.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|113579203|dbj|BAF17566.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|215734982|dbj|BAG95704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196864|gb|EEC79291.1| hypothetical protein OsI_20097 [Oryza sativa Indica Group]
gi|222631716|gb|EEE63848.1| hypothetical protein OsJ_18672 [Oryza sativa Japonica Group]
Length = 444
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
QA L+M D + + + Y++T +RGR VY+QFS+H+EL TDQ
Sbjct: 43 QALLQMQDLHNSVSALQYYSTVQPSVRGRNVYMQFSSHQELTTDQN 88
>gi|108708435|gb|ABF96230.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 300
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 60 QAFVEFTDINQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIVNNKSPGETAGNVLLVT 119
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +HL+ SA
Sbjct: 120 IE-GVQANDVTIDVIHLVFSA 139
>gi|66809907|ref|XP_638677.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467316|gb|EAL65349.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 892
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLL------- 60
QA ++M + +A++ + Y+TT +R + +Y QFSN KE+ + N +LL
Sbjct: 350 QALVQMVELSSATSFIQYYTTVQGSIRSKIIYAQFSNRKEISPAKETPNCILLVTISNYF 409
Query: 61 -HLTIGIILRPATHY 74
++TI + + +HY
Sbjct: 410 YNITIDELFKVFSHY 424
>gi|125526877|gb|EAY74991.1| hypothetical protein OsI_02889 [Oryza sativa Indica Group]
Length = 583
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF+E AD+ A M++YF + AQ+RG+ VY+Q+SN +E+ ++ A
Sbjct: 55 QAFVEFADQNQAIAMISYFASSAEPAQVRGKNVYLQYSNRQEIVNSKSSGEA 106
>gi|238013298|gb|ACR37684.1| unknown [Zea mays]
gi|414867005|tpg|DAA45562.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 317
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTD----QTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ + +T N LL+
Sbjct: 58 QAFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVT 117
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +H++ SA
Sbjct: 118 IE-GVQASDVTIDVIHMVFSA 137
>gi|402586462|gb|EJW80400.1| hypothetical protein WUBG_08691, partial [Wuchereria bancrofti]
Length = 229
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQ 52
QAF+E DE +A T+VT C +R R ++ QFS H+ELKT++
Sbjct: 166 QAFVEYEDERSAQTLVTVNIACPVAIRDRTIFCQFSTHQELKTNR 210
>gi|242058047|ref|XP_002458169.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
gi|241930144|gb|EES03289.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
Length = 553
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD+ A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T
Sbjct: 56 QAFIEFADQNQAIAMISYYASSAEPAQVRGKNVYLQYSNRQEIINNKT 103
>gi|357147883|ref|XP_003574528.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Brachypodium distachyon]
Length = 313
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELK----TDQTHSNALLL 60
QAF+E AD+ A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 55 QAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLV 113
>gi|196010463|ref|XP_002115096.1| hypothetical protein TRIADDRAFT_28601 [Trichoplax adhaerens]
gi|190582479|gb|EDV22552.1| hypothetical protein TRIADDRAFT_28601, partial [Trichoplax
adhaerens]
Length = 476
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
Q FLE+ DE M+ Y+ LRG VY+Q+SNH +L TD +
Sbjct: 39 QCFLELEDENKTRKMMNYYKYVAPNLRGHPVYMQYSNHTQLVTDSS 84
>gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|145324166|ref|NP_001077672.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|75323651|sp|Q6ICX4.1|PTBP3_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 3
gi|48525347|gb|AAT44975.1| At1g43190 [Arabidopsis thaliana]
gi|50198952|gb|AAT70479.1| At1g43190 [Arabidopsis thaliana]
gi|110737368|dbj|BAF00629.1| hypothetical protein [Arabidopsis thaliana]
gi|332193840|gb|AEE31961.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193841|gb|AEE31962.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 432
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT 50
QA L+M D +A + + +FT +RGR VYVQFS+H+EL T
Sbjct: 43 QALLQMQDVSSAVSALQFFTNVQPTIRGRNVYVQFSSHQELTT 85
>gi|168012956|ref|XP_001759167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689480|gb|EDQ75851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT 53
QA L+M D +A ++ Y+TT +RGR VY+QFS+H EL T DQ+
Sbjct: 20 QALLQMQDIPSAINLMQYYTTVQPSVRGRNVYMQFSSHPELTTPDQS 66
>gi|297852124|ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339785|gb|EFH70202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 432
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT 50
QA L+M D +A + + +FT +RGR VYVQFS+H+EL T
Sbjct: 43 QALLQMQDVSSAISALQFFTNVQPTIRGRNVYVQFSSHQELTT 85
>gi|308509800|ref|XP_003117083.1| hypothetical protein CRE_02201 [Caenorhabditis remanei]
gi|308241997|gb|EFO85949.1| hypothetical protein CRE_02201 [Caenorhabditis remanei]
Length = 273
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAF+E +E +A+ VT T Q+RGR ++ Q+S H+ELK D+ +
Sbjct: 172 QAFVEYEEETSAAAFVTSMTAVPIQIRGRTLFAQYSTHRELKFDKNKA 219
>gi|359490453|ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Vitis vinifera]
Length = 446
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 57 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLVT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 IEGADARLVSIDVLHLVFSA 136
>gi|302143674|emb|CBI22535.3| unnamed protein product [Vitis vinifera]
Length = 1311
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 57 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLVT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 IEGADARLVSIDVLHLVFSA 136
>gi|186509647|ref|NP_001118547.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|332640096|gb|AEE73617.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 370
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +Q+
Sbjct: 56 QAFVEFADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQS 103
>gi|297832822|ref|XP_002884293.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
gi|297330133|gb|EFH60552.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +Q+
Sbjct: 56 QAFVEFADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQS 103
>gi|15232047|ref|NP_186764.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|75336151|sp|Q9MAC5.1|PTBP1_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 1
gi|6714473|gb|AAF26159.1|AC008261_16 putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
gi|222423255|dbj|BAH19604.1| AT3G01150 [Arabidopsis thaliana]
gi|332640095|gb|AEE73616.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 399
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +Q+
Sbjct: 56 QAFVEFADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQS 103
>gi|413955317|gb|AFW87966.1| hypothetical protein ZEAMMB73_428640 [Zea mays]
Length = 229
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTC--VAQLRGRAVYVQFSNHKEL----KTDQTHSNALLLH 61
QAF+E D A +MV+YF + AQ+RG+ VY+Q+SN +E+ +T N LL+
Sbjct: 58 QAFVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVT 117
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ T +H++ SA
Sbjct: 118 IE-GVQSSDVTIDVIHMVFSA 137
>gi|449522938|ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Cucumis sativus]
Length = 457
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 57 QAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 IEGTDARLVSIDVLHLVFSA 136
>gi|449456492|ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Cucumis sativus]
Length = 776
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 380 QAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVT 439
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 440 IEGTDARLVSIDVLHLVFSA 459
>gi|356509289|ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 433
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 57 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVPGNVLLVT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 IEGADARLVSIDVLHLVFSA 136
>gi|147804914|emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
Length = 755
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 366 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLVT 425
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 426 IEGADARLVSIDVLHLVFSA 445
>gi|356516021|ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 432
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 57 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 IEGADARLVSIDVLHLVFSA 136
>gi|356499519|ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTHS-----NALLLH 61
QA L+M D +A + ++ +RGR VYVQFS+H+EL T DQ + N +LL
Sbjct: 43 QALLQMQDIPSAVNALQFYANVQPSIRGRNVYVQFSSHQELTTMDQNQAREDEPNRILL- 101
Query: 62 LTIGIILRPATHYQVHLIRS 81
+T+ +L P T +H + S
Sbjct: 102 VTVHHMLYPITADVLHQVFS 121
>gi|294463038|gb|ADE77057.1| unknown [Picea sitchensis]
Length = 528
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKEL----KTDQTHSNALLLH 61
QAF+E AD A +MV+Y+ + AQ+RG+ VY+Q+SN +E+ T SN LL+
Sbjct: 57 QAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYLQYSNRQEIVNSKNTGDVASNVLLVT 116
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ + +HL+ SA
Sbjct: 117 IE-GVEAGDVSIDVLHLVFSA 136
>gi|168027197|ref|XP_001766117.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682760|gb|EDQ69176.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 488
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTH----SNALLLH 61
QAF+E AD A MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + SN LL+
Sbjct: 57 QAFVEFADLNQAIAMVSYYASSSEPAQVRGKTVYLQYSNRQEIVTSKNSGDVASNVLLVT 116
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ + +HL+ SA
Sbjct: 117 IE-GVEAGDVSIDVLHLVFSA 136
>gi|168060645|ref|XP_001782305.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666235|gb|EDQ52895.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTH----SNALLLH 61
QAF+E AD A MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + SN LL+
Sbjct: 57 QAFVEFADLNQAIAMVSYYASSSEPAQVRGKTVYLQYSNRQEIVTSKNSGDVASNVLLVT 116
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ + +HL+ SA
Sbjct: 117 IE-GVEAGDVSIDVLHLVFSA 136
>gi|440793956|gb|ELR15127.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 515
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLL 60
QA LE AD AA +M ++ + +RGR VY++FS H++L N +LL
Sbjct: 202 QALLEFADIAAAISMSNFYLSTQPNIRGRKVYMRFSRHQQLTASAAGPNRILL 254
>gi|116787007|gb|ABK24339.1| unknown [Picea sitchensis]
Length = 491
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKEL----KTDQTHSNALLL 60
QAF+E AD A MV+Y+ + AQ+RG++VY+Q+SN +E+ T SN LL+
Sbjct: 57 QAFVEFADLNQAIAMVSYYASSSEPAQVRGKSVYLQYSNRQEIVNNKSTGDVASNVLLV 115
>gi|356559629|ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTHS-----NALLLH 61
QA L+M D +A + ++ +RGR VYVQFS+H+EL T DQ + N +LL
Sbjct: 43 QALLQMQDIPSAVNALQFYANVQPSIRGRNVYVQFSSHQELTTMDQNQAREDEPNRILL- 101
Query: 62 LTIGIILRPATHYQVHLIRS 81
+T+ +L P T +H + S
Sbjct: 102 VTVHHMLYPITADVLHQVFS 121
>gi|209362272|gb|ACI43571.1| RBP50 [Cucurbita maxima]
Length = 445
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA ++M D +A + +F +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 43 QALIQMQDVPSAVNALQFFANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILL 102
Query: 61 HLTIGIILRPATHYQVHLI 79
+TI +L P T +H +
Sbjct: 103 -VTIHHMLYPITVEVLHQV 120
>gi|449441199|ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Cucumis sativus]
Length = 408
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA ++M D +A + +F +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 7 QALMQMQDVPSAVNALQFFANLQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILL 66
Query: 61 HLTIGIILRPATHYQVHLI 79
+TI +L P T +H +
Sbjct: 67 -VTIHHMLYPITVEVLHQV 84
>gi|334702287|gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum tuberosum]
Length = 441
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA L+M D +A + +++ +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 43 QALLQMQDVPSAVKALQFYSNVQPSIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNRILL 102
Query: 61 HLTIGIILRPATHYQVHLIRS 81
+TI +L P T +H + S
Sbjct: 103 -VTIHHMLYPITVDVLHQVFS 122
>gi|324528885|gb|ADY48963.1| Polypyrimidine tract-binding protein 1 [Ascaris suum]
Length = 122
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQ 52
QAF+E +E A +VT + C +R R ++ QFS H+ELKTD+
Sbjct: 54 QAFVEYEEEQGAQILVTMSSACPVAIRDRTIFCQFSTHQELKTDK 98
>gi|156392443|ref|XP_001636058.1| predicted protein [Nematostella vectensis]
gi|156223157|gb|EDO43995.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAFLEM + A ++ ++ +RGR +Y+Q+SNH+EL T+++
Sbjct: 40 QAFLEMKTKENAMALMNSYSYIPPSIRGRQIYIQYSNHQELTTNESQ 86
>gi|357443611|ref|XP_003592083.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481131|gb|AES62334.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 407
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTHS-----NALLLH 61
QA ++M D +A + + ++ +RGR VYVQFS+H+EL T DQ+ N +LL
Sbjct: 7 QALIQMQDVPSAVSALHFYGNTQPSIRGRNVYVQFSSHQELTTIDQSQGRGDEPNRILL- 65
Query: 62 LTIGIILRPAT 72
+TI +L P T
Sbjct: 66 VTIHHVLYPIT 76
>gi|357443609|ref|XP_003592082.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481130|gb|AES62333.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|388492616|gb|AFK34374.1| unknown [Medicago truncatula]
Length = 443
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTHS-----NALLLH 61
QA ++M D +A + + ++ +RGR VYVQFS+H+EL T DQ+ N +LL
Sbjct: 43 QALIQMQDVPSAVSALHFYGNTQPSIRGRNVYVQFSSHQELTTIDQSQGRGDEPNRILL- 101
Query: 62 LTIGIILRPAT 72
+TI +L P T
Sbjct: 102 VTIHHVLYPIT 112
>gi|449503770|ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA ++M D +A + +F +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 43 QALMQMQDVPSAVNALQFFANLQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILL 102
Query: 61 HLTIGIILRPATHYQVHLI 79
+TI +L P T +H +
Sbjct: 103 -VTIHHMLYPITVEVLHQV 120
>gi|55733800|gb|AAV59307.1| putative polypyrimidine track-binding protein [Oryza sativa
Japonica Group]
Length = 389
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 9 AFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
A L+M D + + + Y++T +RGR VY+QFS+H+EL TDQ
Sbjct: 36 ALLQMQDLHNSVSALQYYSTVQPSVRGRNVYMQFSSHQELTTDQN 80
>gi|3395938|gb|AAC62015.1| polypyrimidine tract-binding protein homolog [Arabidopsis thaliana]
Length = 418
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 8 QAFLEMADECAASTMVTYFTTC--VAQLRGRAVYVQFSNHKELKTDQTHSN 56
QAF+E AD A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +Q+ +
Sbjct: 56 QAFVEFADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGD 106
>gi|449441197|ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Cucumis sativus]
Length = 434
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA ++M D +A + +F +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 45 QALMQMQDVPSAVNALQFFANLQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILL 104
Query: 61 HLTIGIILRPATHYQVHLI 79
+TI +L P T +H +
Sbjct: 105 -VTIHHMLYPITVEVLHQV 122
>gi|224118028|ref|XP_002317715.1| predicted protein [Populus trichocarpa]
gi|222858388|gb|EEE95935.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 4 YDEIQAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT 50
+D+ AFL++ D + + Y+T+ +RGR+VYVQFS+H+EL T
Sbjct: 27 HDKNHAFLQIQDVISTINALQYYTSVQLTIRGRSVYVQFSSHQELTT 73
>gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein homologue [Cicer arietinum]
Length = 442
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTH 54
QA L+M D +A + + ++ +RGR VYVQFS+HKEL T DQ+
Sbjct: 43 QALLQMEDIPSAISALQFYANAQPSIRGRNVYVQFSSHKELTTMDQSQ 90
>gi|115441273|ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|113534447|dbj|BAF06830.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|215697244|dbj|BAG91238.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 439
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 7 IQAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
++A +M D +A ++ Y+ T +RGR VY+Q+S+H+EL TDQ+
Sbjct: 38 LRAKNQMEDLASAVNVIQYYNTIQPSVRGRNVYLQYSSHQELTTDQS 84
>gi|443711043|gb|ELU04990.1| hypothetical protein CAPTEDRAFT_200421 [Capitella teleta]
Length = 524
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QA+LEM D +A +V+ + Q+RGR VYVQFSN+ LKT+
Sbjct: 70 QAWLEMVDVQSAQAVVSCYHDRPPQIRGRTVYVQFSNYDILKTE 113
>gi|356546193|ref|XP_003541515.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 428
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSN 56
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++
Sbjct: 57 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAAD 107
>gi|357463843|ref|XP_003602203.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355491251|gb|AES72454.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 828
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 381 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVHNKTAADVAGNVLLVT 440
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 441 VEGEDARLVSIDVLHLVFSA 460
>gi|118488039|gb|ABK95840.1| unknown [Populus trichocarpa]
Length = 442
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E +D A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 57 QAFIEFSDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVGGNVLLVT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 IEGADARLVSIDVLHLVFSA 136
>gi|356535770|ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 443
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTHS-----NALLLH 61
QA ++M D +A + ++ +RGR VYVQFS+H+EL T DQ+ N +LL
Sbjct: 43 QALIQMQDVPSAVNALQFYANVQPSIRGRNVYVQFSSHQELTTMDQSQGRGDEPNRILL- 101
Query: 62 LTIGIILRPAT 72
+T+ +L P T
Sbjct: 102 VTVHHMLYPMT 112
>gi|224082480|ref|XP_002306709.1| predicted protein [Populus trichocarpa]
gi|222856158|gb|EEE93705.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT 53
QA L+M D +A + Y+T +RGR VY+QFS+H+EL T DQ
Sbjct: 43 QALLQMQDVPSAINALQYYTDVQPTIRGRNVYIQFSSHQELTTMDQN 89
>gi|281210224|gb|EFA84392.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 468
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKEL---KTDQTHSNALLLHLTI 64
Q F++MAD +A+ + ++TT +R + +VQ+SN +E+ + +T +N LL +TI
Sbjct: 86 QGFIQMADLTSATAFIQFYTTIQGSIRSKNFFVQYSNREEITSYSSVETPNNILL--VTI 143
Query: 65 GIILRPAT 72
I+ P T
Sbjct: 144 SNIIYPVT 151
>gi|407405096|gb|EKF30263.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 336
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYF-TTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F T A++ GR VY+++SNH+EL Q S LL+ +
Sbjct: 114 QALVEMESTKSAQQLVDFFRQTGYAEIDGRRVYIRYSNHQELTATQHTSKTLLVSM 169
>gi|407844094|gb|EKG01787.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYF-TTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F T A++ GR VY+++SNH+EL Q S LL+ +
Sbjct: 114 QALVEMESTKSAQQLVDFFRQTGYAEIDGRRVYIRYSNHQELTATQHTSKTLLVSM 169
>gi|330840158|ref|XP_003292087.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
gi|325077693|gb|EGC31389.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
Length = 748
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLL 60
QA ++M + +A + + Y+TT +R + +Y QFSN KE+ + N +LL
Sbjct: 212 QALVQMVEISSAISFIQYYTTVQGSIRSKTIYTQFSNRKEISPAKETPNCILL 264
>gi|71423973|ref|XP_812637.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70877443|gb|EAN90786.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYF-TTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F T A++ GR VY+++SNH+EL Q S LL+ +
Sbjct: 114 QALVEMESTKSAQQLVDFFRQTGYAEIDGRRVYIRYSNHQELTATQHTSKTLLVSM 169
>gi|414881408|tpg|DAA58539.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
Length = 560
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKEL----KTDQTHSNALLL 60
QAF+E D+ A M++Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+
Sbjct: 56 QAFIEFGDQNQAIAMISYYASSTEPAQVRGKNVYLQYSNRQEIVNNKATGEGSGNVLLV 114
>gi|293335109|ref|NP_001169809.1| uncharacterized protein LOC100383701 [Zea mays]
gi|224031787|gb|ACN34969.1| unknown [Zea mays]
Length = 397
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 13 MADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
M D A+ + + Y+T+ +RGR VY+QFS+H+EL TDQ+
Sbjct: 1 MEDIHASVSALQYYTSVQPSIRGRNVYMQFSSHQELTTDQS 41
>gi|255545042|ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223547490|gb|EEF48985.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 447
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E D A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 57 QAFIEFMDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 IEGADARLVSIDVLHLVFSA 136
>gi|224066621|ref|XP_002302167.1| predicted protein [Populus trichocarpa]
gi|222843893|gb|EEE81440.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT------HSNALLL 60
QA L+M D +A + +T +RGR VYVQFS+H+EL T DQ N +LL
Sbjct: 43 QALLQMQDVPSAINALQLYTNIQPTIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILL 102
Query: 61 HLTIGIILRPATHYQVHLIRS 81
+TI +L P T +H + S
Sbjct: 103 -VTIHHMLYPITVEVLHQVFS 122
>gi|81076794|gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
Length = 442
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKS 103
>gi|334702291|gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum]
Length = 467
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKS 103
>gi|77745463|gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum]
Length = 437
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKS 103
>gi|118488224|gb|ABK95931.1| unknown [Populus trichocarpa]
Length = 473
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E D+ A MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFVDQNQAIQMVSYYASSSDPAQVRGKTVYIQYSNRHEIVNNKS 103
>gi|224141415|ref|XP_002324068.1| predicted protein [Populus trichocarpa]
gi|222867070|gb|EEF04201.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E A++ A MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFAEQNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKS 103
>gi|255584813|ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223527087|gb|EEF29269.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 483
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFADLNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKS 103
>gi|340056209|emb|CCC50538.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 314
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYF-TTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F T A++ GR VY+++SNH+EL Q S LL+ +
Sbjct: 118 QALVEMESTKSAQQLVDFFRETGYAEIDGRRVYIRYSNHQELTATQHTSKTLLVSM 173
>gi|363807178|ref|NP_001242348.1| uncharacterized protein LOC100810102 [Glycine max]
gi|255645249|gb|ACU23122.1| unknown [Glycine max]
Length = 428
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSN 56
QAF+E AD A M++Y+ + AQ+RG+ VY+Q+S+ +E+ ++T ++
Sbjct: 57 QAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSDRQEIVNNKTAAD 107
>gi|342183429|emb|CCC92909.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 320
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYF-TTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F T A + GR VY+++SNH+EL Q S LL+ +
Sbjct: 122 QALVEMESTKSAQQLVDFFRETGYADIDGRRVYIRYSNHQELTATQHTSKTLLVSM 177
>gi|297796143|ref|XP_002865956.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
gi|297311791|gb|EFH42215.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E D A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ +LL
Sbjct: 57 QAFIEFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVT 116
Query: 63 TIGIILRPATHYQVHLIRSA 82
G R + +HL+ SA
Sbjct: 117 VEGEDARMVSIDVLHLVFSA 136
>gi|388491010|gb|AFK33571.1| unknown [Lotus japonicus]
Length = 457
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
QAF+E D A +MV+Y+ + AQ+RG+ VY+Q+SN E+ ++ + +LL
Sbjct: 56 QAFVEFGDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKAPGDVPGNVLLVT 115
Query: 63 TIGIILRPATHYQVHLIRSA 82
G+ T +HL+ SA
Sbjct: 116 MEGVEAGDVTIDVIHLVFSA 135
>gi|302789199|ref|XP_002976368.1| hypothetical protein SELMODRAFT_104811 [Selaginella moellendorffii]
gi|302811042|ref|XP_002987211.1| hypothetical protein SELMODRAFT_125500 [Selaginella moellendorffii]
gi|300145108|gb|EFJ11787.1| hypothetical protein SELMODRAFT_125500 [Selaginella moellendorffii]
gi|300155998|gb|EFJ22628.1| hypothetical protein SELMODRAFT_104811 [Selaginella moellendorffii]
Length = 440
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKEL----KTDQTHSNALLL 60
QAF+E AD A MV+++ + AQ+RG+ VY+Q+SN +E+ T SN LL+
Sbjct: 57 QAFVEFADLNQAIAMVSFYASSSEPAQVRGKTVYLQYSNRQEIVNSKNTGDVASNVLLV 115
>gi|363814551|ref|NP_001242751.1| uncharacterized protein LOC100819672 [Glycine max]
gi|255639782|gb|ACU20184.1| unknown [Glycine max]
Length = 431
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQTHS-----NALLLH 61
QA ++M D +A + ++ +RGR VYVQFS+H+EL T +Q+ N +LL
Sbjct: 43 QALIQMQDVPSAVNALQFYANVQPSIRGRNVYVQFSSHQELTTMEQSQGRGDEPNRILL- 101
Query: 62 LTIGIILRPAT 72
+T+ +L P T
Sbjct: 102 VTVHHMLYPMT 112
>gi|15238677|ref|NP_200130.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
gi|75333813|sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2
gi|9757999|dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
gi|53749130|gb|AAU90050.1| At5g53180 [Arabidopsis thaliana]
gi|55733737|gb|AAV59265.1| At5g53180 [Arabidopsis thaliana]
gi|332008935|gb|AED96318.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
Length = 429
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNAL--LLHLT 63
QAF+E D A M++Y+ + AQ+RG+ VY+Q+SN +E+ ++T ++ + +L +T
Sbjct: 57 QAFIEFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVT 116
Query: 64 I-GIILRPATHYQVHLIRSA 82
I G R + +HL+ SA
Sbjct: 117 IEGDDARMVSIDVLHLVFSA 136
>gi|71745136|ref|XP_827198.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831363|gb|EAN76868.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261331414|emb|CBH14408.1| DRBD4 [Trypanosoma brucei gambiense DAL972]
Length = 327
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYFTTC-VAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F A++ GR VY+++SNH+EL Q S LL+ +
Sbjct: 119 QALVEMESTKSAQQLVDFFREAGYAEIDGRRVYIRYSNHQELTATQHTSKTLLVSM 174
>gi|225452861|ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
[Vitis vinifera]
Length = 420
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E D A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFLDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKS 103
>gi|225452859|ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
[Vitis vinifera]
gi|296082938|emb|CBI22239.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E D A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFLDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKS 103
>gi|356531752|ref|XP_003534440.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 467
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A +MV+Y+ + A +RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFADLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKS 103
>gi|356531750|ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 505
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A +MV+Y+ + A +RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFADLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKS 103
>gi|356531748|ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E AD A +MV+Y+ + A +RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFADLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKS 103
>gi|255566638|ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223536394|gb|EEF38043.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 437
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QA L+M D +A + ++ +RGR VYVQFS+H+EL T +S
Sbjct: 43 QALLQMQDIPSAINALQFYGNVQPTIRGRNVYVQFSSHQELTTMDQNSQG 92
>gi|440804444|gb|ELR25321.1| hnRNPL/PTB/hephaestus splicing factor subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 575
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 6 EIQAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELK--TDQTHSNALLLHLT 63
+ Q F++M D +AS +V ++ +RG+ VY Q+S H+ + T SN +LL +T
Sbjct: 153 KTQGFVQMQDVQSASALVQCYSQAQVNIRGKPVYFQYSQHQAVNTATGDEQSNHILL-VT 211
Query: 64 IGIILRPATHYQVHLIRS 81
+ ++ P T +H + S
Sbjct: 212 VTNLVYPVTIDILHQVFS 229
>gi|301103606|ref|XP_002900889.1| polypyrimidine tract-binding protein, putative [Phytophthora
infestans T30-4]
gi|262101644|gb|EEY59696.1| polypyrimidine tract-binding protein, putative [Phytophthora
infestans T30-4]
Length = 655
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
QAF+++ D +AS +VT++ T A +RG+ ++ ++SN E+ H
Sbjct: 62 QAFVQLPDVTSASNLVTFYQTRDALIRGKKIFFEYSNRNEITVRPEH 108
>gi|148701925|gb|EDL33872.1| mCG9934 [Mus musculus]
Length = 559
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQ-FSNH-KELKTDQTHS 55
QAF+EM+ E +A MV Y+T LRG+ V++Q ++ H KEL+ T S
Sbjct: 66 QAFMEMSTEESAKAMVNYYTWMTPVLRGQPVHIQVYTPHCKELRVSNTPS 115
>gi|356568678|ref|XP_003552537.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 467
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E D A +MV+Y+ + A +RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKS 103
>gi|356568676|ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E D A +MV+Y+ + A +RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKS 103
>gi|71409156|ref|XP_806939.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70870824|gb|EAN85088.1| RNA-binding protein, putative, partial [Trypanosoma cruzi]
Length = 165
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 8 QAFLEMADECAASTMVTYF-TTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
QA +EM +A +V +F T A++ GR VY+++SNH+EL Q S L
Sbjct: 114 QALVEMESTKSAQQLVDFFRQTGYAEIDGRRVYIRYSNHQELTATQHTSKTL 165
>gi|384245764|gb|EIE19256.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 5 DEIQAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKEL----KTDQTHSNAL 58
++ QAF+E D A MV+YF A++RG+ VY+Q+S +E+ ++ + N L
Sbjct: 51 NKNQAFVEFPDMNMAIQMVSYFANAADPAKVRGKTVYLQYSTRQEIVNSTRSAEQGGNVL 110
Query: 59 LLHL 62
L+ L
Sbjct: 111 LVSL 114
>gi|392341647|ref|XP_003754390.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
gi|392349693|ref|XP_003750446.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
Length = 558
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 8 QAFLEM-ADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
QAF EM +E A+T+V Y T+ L + Y+ FSNH+ELKT + + A
Sbjct: 94 QAFTEMNTEEEDANTVVNYXTSVEPVLCRQPTYIXFSNHEELKTHSSPNQA 144
>gi|255636160|gb|ACU18422.1| unknown [Glycine max]
Length = 304
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E D A +MV+Y+ + A +RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKS 103
>gi|294461640|gb|ADE76380.1| unknown [Picea sitchensis]
Length = 511
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 8 QAFLEMADECAASTMVTYFTTC--VAQLRGRAVYVQFSNHKELKTDQTH----SNALLLH 61
QAF+E A+ A MV+Y + AQ+RG+ VY+Q+SN E+ + SN LL+
Sbjct: 57 QAFVEFAELNQAIAMVSYHASSPEQAQVRGKTVYLQYSNRHEIVNSKNSGDEASNVLLVT 116
Query: 62 LTIGIILRPATHYQVHLIRSA 82
+ G+ + +HL+ SA
Sbjct: 117 IE-GVEAGDVSIDVLHLVFSA 136
>gi|356568680|ref|XP_003552538.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 304
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
QAF+E D A +MV+Y+ + A +RG+ VY+Q+SN E+ +++
Sbjct: 56 QAFVEFVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKS 103
>gi|348686489|gb|EGZ26304.1| hypothetical protein PHYSODRAFT_350288 [Phytophthora sojae]
Length = 649
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKEL 48
QAF+++ D +A +VT++ T A +RG+ ++ +FSN E+
Sbjct: 62 QAFVQLPDVTSAVNLVTFYQTRDALIRGKKIFFEFSNRNEI 102
>gi|328867981|gb|EGG16362.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 656
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD---QTHSNALLLHLTI 64
Q F++ + +AS+ + ++TT +R + +VQ+SN +E+ + +T +N LL +TI
Sbjct: 286 QGFIQFLELTSASSFIQFYTTIQGCIRAKNFFVQYSNREEITSTSAVETPNNILL--VTI 343
Query: 65 GIILRPAT 72
I+ P T
Sbjct: 344 SNIVYPVT 351
>gi|395824362|ref|XP_003785435.1| PREDICTED: polypyrimidine tract-binding protein 3 [Otolemur
garnettii]
Length = 534
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 27 TTCVAQLRGRAVYVQFSNHKELKTD 51
T QLR + VY+Q+SNH+ELKTD
Sbjct: 97 TPVTPQLRSQPVYIQYSNHRELKTD 121
>gi|341888865|gb|EGT44800.1| hypothetical protein CAEBREN_15314 [Caenorhabditis brenneri]
Length = 229
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAF+E +E +A+ VT T Q+RGR ++ Q+S H+ELK D+ +
Sbjct: 159 QAFVEYEEEASAAAFVTGMTAVPIQIRGRTLFAQYSTHRELKFDKNKA 206
>gi|401414770|ref|XP_003871882.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488102|emb|CBZ23349.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 301
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYFTT-CVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F A++ GR VY++FS H+ L Q + LL+ +
Sbjct: 110 QALIEMKSPKSAEQLVDFFKEPGYAEIDGRRVYIRFSTHQNLTATQHATRTLLVSM 165
>gi|146076563|ref|XP_001462957.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|398009965|ref|XP_003858181.1| RNA-binding protein, putative [Leishmania donovani]
gi|134067038|emb|CAM65144.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|322496386|emb|CBZ31457.1| RNA-binding protein, putative [Leishmania donovani]
Length = 311
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYFTT-CVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F A++ GR VY++FS H+ L Q + LL+ +
Sbjct: 120 QALIEMKSPKSAEQLVDFFKEPGYAEIDGRRVYIRFSTHQNLTATQHATRTLLVSM 175
>gi|76363834|ref|XP_888628.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|12311843|emb|CAC22661.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 311
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYFTT-CVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F A++ GR VY++FS H+ L Q + LL+ +
Sbjct: 120 QALIEMKSPKSAEQLVDFFKEPGYAEIDGRRVYIRFSTHQNLTATQHATRTLLVSM 175
>gi|357496461|ref|XP_003618519.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355493534|gb|AES74737.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 483
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKEL 48
QAF++ A+ A +MV+Y+ + AQ+RG+ VY+Q+SN +
Sbjct: 57 QAFVQFAELNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHHI 99
>gi|356541547|ref|XP_003539236.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Glycine max]
Length = 447
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 8 QAFLEMADECAASTMVTYF-TTCVAQLRGRAVYVQFSNHKELKTDQ-THSNALLLHL 62
Q F+E D A+++V+Y+ ++ QLRG+ +YVQ+S EL ++ T N L++ +
Sbjct: 63 QGFVEFEDINEANSIVSYYLSSNPVQLRGKTIYVQYSERPELVINKYTKGNILIVTM 119
>gi|154331968|ref|XP_001561801.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059121|emb|CAM41596.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 315
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 8 QAFLEMADECAASTMVTYFTT-CVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHL 62
QA +EM +A +V +F A++ GR VY++FS H+ L Q + LL+ +
Sbjct: 124 QALIEMKSPKSAEQLVDFFKEPGYAEIDGRRVYIRFSTHQNLTATQHATRTLLVSM 179
>gi|302791034|ref|XP_002977284.1| hypothetical protein SELMODRAFT_54589 [Selaginella
moellendorffii]
gi|300155260|gb|EFJ21893.1| hypothetical protein SELMODRAFT_54589 [Selaginella
moellendorffii]
Length = 414
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKEL 48
QAF++M D A ++ +F + A +RGR V +QFS KEL
Sbjct: 38 QAFVQMQDIAKAFLVIRHFASRQATVRGRDVSIQFSARKEL 78
>gi|325187058|emb|CCA21600.1| polypyrimidine tractbinding protein putative [Albugo laibachii
Nc14]
Length = 614
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT 50
QAF+++ D +A+ ++ ++ T A +RG ++ ++SN E+ T
Sbjct: 69 QAFVQLPDVSSATNLINFYQTRDAMIRGARIFFEYSNRSEITT 111
>gi|357501941|ref|XP_003621259.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496274|gb|AES77477.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 780
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 1 MYDYDEIQAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
+YD + + D+ A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 165 VYDRTLWCNLIHVVDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKS 219
>gi|302821012|ref|XP_002992171.1| hypothetical protein SELMODRAFT_44533 [Selaginella
moellendorffii]
gi|300140097|gb|EFJ06826.1| hypothetical protein SELMODRAFT_44533 [Selaginella
moellendorffii]
Length = 414
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKEL 48
QAF++M D A ++ +F + A +RGR V +QFS KEL
Sbjct: 38 QAFVQMQDIAKAFLVIRHFASRQATVRGRDVSIQFSARKEL 78
>gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193842|gb|AEE31963.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 430
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT 50
QA L+M D +A + + +FT +R VYVQFS+H+EL T
Sbjct: 43 QALLQMQDVSSAVSALQFFTNVQPTIRN--VYVQFSSHQELTT 83
>gi|449267533|gb|EMC78469.1| Regulator of differentiation 1, partial [Columba livia]
Length = 499
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
QAF E+ E A ++ Y+ + L + +++Q+SN +EL+TD
Sbjct: 51 QAFSEVGTEEPAVNVMNYYASAAPLLHSQPLFIQYSNPRELRTD 94
>gi|25146811|ref|NP_741041.1| Protein PTB-1, isoform a [Caenorhabditis elegans]
gi|20338920|emb|CAA85411.3| Protein PTB-1, isoform a [Caenorhabditis elegans]
Length = 615
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHS 55
QAF+E +E +A+ V+ T Q+RGR ++ Q+S H+ELK D+ +
Sbjct: 158 QAFVEYEEEASAAAFVSGMTAVPIQIRGRTLFAQYSTHRELKFDKNKA 205
>gi|357501945|ref|XP_003621261.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496276|gb|AES77479.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 592
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 1 MYDYDEIQAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
+YD + + D+ A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 165 VYDRTLWCNLIHVVDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKS 219
>gi|357501943|ref|XP_003621260.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496275|gb|AES77478.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 618
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 1 MYDYDEIQAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQT 53
+YD + + D+ A +MV+Y+ + AQ+RG+ VY+Q+SN E+ +++
Sbjct: 165 VYDRTLWCNLIHVVDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKS 219
>gi|414870437|tpg|DAA48994.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 227
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 22 MVTYFTTC--VAQLRGRAVYVQFSNHKEL----KTDQTHSNALLLHLTIGIILRPATHYQ 75
MV+Y+ + AQ+RG+ VY+Q+SN +E+ T + N LL+ G+ T
Sbjct: 1 MVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFE-GVQPNDVTIEV 59
Query: 76 VHLIRSA 82
+HL+ SA
Sbjct: 60 IHLVFSA 66
>gi|313234966|emb|CBY24911.1| unnamed protein product [Oikopleura dioica]
Length = 788
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKEL 48
QAFLE+ + A M Y+ +R R +++QFSNHK+L
Sbjct: 188 QAFLEVDNIEMAREMAQYYLLNPPCIRQRTIHLQFSNHKQL 228
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKEL 48
QAFLE+ + A M Y+ +R R +++QFSNHK+L
Sbjct: 358 QAFLEVDNIEMAREMAQYYLLNPPCIRQRTIHLQFSNHKQL 398
>gi|320170468|gb|EFW47367.1| polypyrimidine tract-binding protein PTB-2 [Capsaspora owczarzaki
ATCC 30864]
Length = 546
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTH 54
Q F+EM AA ++ +RGR VY Q SNH +LK ++ H
Sbjct: 106 QGFIEMEQLDAAKNLLAASEANPQFIRGRRVYFQPSNHVQLKRNEQH 152
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.330 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,292,598,719
Number of Sequences: 23463169
Number of extensions: 38300284
Number of successful extensions: 87591
Number of sequences better than 100.0: 467
Number of HSP's better than 100.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 87138
Number of HSP's gapped (non-prelim): 468
length of query: 94
length of database: 8,064,228,071
effective HSP length: 64
effective length of query: 30
effective length of database: 6,562,585,255
effective search space: 196877557650
effective search space used: 196877557650
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 69 (31.2 bits)