AmiGO: BLAST Results


BLAST match view associations BLAST with heph heph heph hephaestus	protein from Drosophila melanogaster	7.3e-12
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Homo sapiens	4.5e-11
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Homo sapiens	5.8e-11
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Homo sapiens	7.4e-11
BLAST match view associations BLAST with Ptbp1 Ptbp1 Ptbp1 Polypyrimidine tract-binding protein 1	protein from Rattus norvegicus	3.7e-10
BLAST match view associations BLAST with Ptbp1 Ptbp1 Ptbp1 polypyrimidine tract binding protein 1	gene from Rattus norvegicus	3.7e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Bos taurus	5.3e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Bos taurus	7.2e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Homo sapiens	7.2e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Uncharacterized protein	protein from Canis lupus familiaris	7.8e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Sus scrofa	7.8e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Sus scrofa	7.8e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Uncharacterized protein	protein from Canis lupus familiaris	7.8e-10
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Uncharacterized protein	protein from Bos taurus	8.5e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Uncharacterized protein	protein from Gallus gallus	1.2e-09
BLAST match view associations BLAST with Ptbp1 Ptbp1 Ptbp1 polypyrimidine tract binding protein 1	protein from Mus musculus	1.5e-09
BLAST match view associations BLAST with F1LY02 F1LY02 F1LY02 Uncharacterized protein	protein from Rattus norvegicus	1.7e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Polypyrimidine tract-binding protein 2	protein from Homo sapiens	2.6e-09
BLAST match view associations BLAST with ptbp3 ptbp3 ptbp3 polypyrimidine tract binding protein 3	gene_product from Danio rerio	3.1e-09
BLAST match view associations BLAST with PTBP3 PTBP3 PTBP3 Polypyrimidine tract-binding protein 3	protein from Homo sapiens	4.3e-09
BLAST match view associations BLAST with Ptbp3 Ptbp3 Ptbp3 polypyrimidine tract binding protein 3	protein from Mus musculus	5.1e-09
BLAST match view associations BLAST with Ptbp3 Ptbp3 Ptbp3 polypyrimidine tract binding protein 3	gene from Rattus norvegicus	5.1e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Polypyrimidine tract-binding protein 2	protein from Homo sapiens	6.7e-09
BLAST match view associations BLAST with Ptbp2 Ptbp2 Ptbp2 polypyrimidine tract binding protein 2	protein from Mus musculus	6.7e-09
BLAST match view associations BLAST with Ptbp2 Ptbp2 Ptbp2 polypyrimidine tract binding protein 2	gene from Rattus norvegicus	6.7e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Uncharacterized protein	protein from Gallus gallus	6.7e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Uncharacterized protein	protein from Canis lupus familiaris	6.7e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Polypyrimidine tract-binding protein 2	protein from Homo sapiens	7.0e-09
BLAST match view associations BLAST with F1MPG6 F1MPG6 F1MPG6 Uncharacterized protein	protein from Bos taurus	1.1e-08
BLAST match view associations BLAST with ROD1 ROD1 ROD1	protein from Sus scrofa	1.1e-08
BLAST match view associations BLAST with ROD1 ROD1 ROD1 Uncharacterized protein	protein from Gallus gallus	4.2e-08
BLAST match view associations BLAST with ptbp1b ptbp1b ptbp1b polypyrimidine tract binding protein 1b	gene_product from Danio rerio	7.2e-08
BLAST match view associations BLAST with ptbp2b ptbp2b ptbp2b polypyrimidine tract binding protein 2b	gene_product from Danio rerio	8.2e-08
BLAST match view associations BLAST with ptbp2a ptbp2a ptbp2a polypyrimidine tract binding protein 2a	gene_product from Danio rerio	1.2e-07
BLAST match view associations BLAST with ptbp1a ptbp1a ptbp1a polypyrimidine tract binding protein 1a	gene_product from Danio rerio	5.1e-07
BLAST match view associations BLAST with Smptb Smptb Smptb polypyrimidine tract-binding protein	gene from Rattus norvegicus	8.0e-06
BLAST match view associations BLAST with PTB3 PTB3 PTB3 AT1G43190	protein from Arabidopsis thaliana	1.1e-05
BLAST match view associations BLAST with PTB1 PTB1 PTB1 AT3G01150	protein from Arabidopsis thaliana	3.3e-05
BLAST match view associations BLAST with PTB2 PTB2 PTB2 AT5G53180	protein from Arabidopsis thaliana	0.00010
BLAST match view associations BLAST with ptb-1 ptb-1 ptb-1	gene from Caenorhabditis elegans	0.00013
BLAST match view associations BLAST with DDB_G0284321 DDB_G0284321 DDB_G0284321 putative polypyrimidine tract binding protein (PTBP1)	gene from Dictyostelium discoideum	0.00020

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy9170
        (94 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0011224 - symbol:heph "hephaestus" species:7227 "D...   172  7.3e-12   1
UNIPROTKB|K7EKJ7 - symbol:PTBP1 "Polypyrimidine tract-bin...   153  4.5e-11   1
UNIPROTKB|K7ELW5 - symbol:PTBP1 "Polypyrimidine tract-bin...   152  5.8e-11   1
UNIPROTKB|K7ES59 - symbol:PTBP1 "Polypyrimidine tract-bin...   151  7.4e-11   1
UNIPROTKB|D4AB53 - symbol:Ptbp1 "Polypyrimidine tract-bin...   154  3.4e-10   1
UNIPROTKB|F1LM18 - symbol:Ptbp1 "Polypyrimidine tract-bin...   154  3.7e-10   1
RGD|62047 - symbol:Ptbp1 "polypyrimidine tract binding pr...   154  3.7e-10   1
UNIPROTKB|Q6P736 - symbol:Ptbp1 "Polypyrimidine tract bin...   154  3.7e-10   1
UNIPROTKB|A8YXY5 - symbol:PTBP1 "PTBP1 protein" species:9...   151  5.3e-10   1
UNIPROTKB|Q8WN55 - symbol:PTBP1 "Polypyrimidine tract-bin...   151  7.2e-10   1
UNIPROTKB|P26599 - symbol:PTBP1 "Polypyrimidine tract-bin...   151  7.2e-10   1
UNIPROTKB|J9P5T5 - symbol:PTBP1 "Uncharacterized protein"...   151  7.8e-10   1
UNIPROTKB|F1S6R7 - symbol:PTBP1 "Polypyrimidine tract-bin...   151  7.8e-10   1
UNIPROTKB|Q29099 - symbol:PTBP1 "Polypyrimidine tract-bin...   151  7.8e-10   1
UNIPROTKB|F1PCJ7 - symbol:PTBP1 "Uncharacterized protein"...   151  7.8e-10   1
UNIPROTKB|F6Q0P6 - symbol:PTBP2 "Uncharacterized protein"...   142  8.5e-10   1
UNIPROTKB|F1P5K0 - symbol:PTBP1 "Uncharacterized protein"...   149  1.2e-09   1
UNIPROTKB|E1BVR1 - symbol:PTBP1 "Uncharacterized protein"...   149  1.2e-09   1
MGI|MGI:97791 - symbol:Ptbp1 "polypyrimidine tract bindin...   148  1.5e-09   1
UNIPROTKB|F1LY02 - symbol:F1LY02 "Uncharacterized protein...   147  1.7e-09   1
UNIPROTKB|B4DI28 - symbol:PTBP2 "cDNA FLJ55578, highly si...   142  2.6e-09   1
ZFIN|ZDB-GENE-091116-1 - symbol:ptbp3 "polypyrimidine tra...   145  3.1e-09   1
UNIPROTKB|O95758 - symbol:PTBP3 "Polypyrimidine tract-bin...   144  4.3e-09   1
MGI|MGI:1923334 - symbol:Ptbp3 "polypyrimidine tract bind...   143  5.1e-09   1
RGD|621671 - symbol:Ptbp3 "polypyrimidine tract binding p...   143  5.1e-09   1
UNIPROTKB|Q9UKA9 - symbol:PTBP2 "Polypyrimidine tract-bin...   142  6.7e-09   1
MGI|MGI:1860489 - symbol:Ptbp2 "polypyrimidine tract bind...   142  6.7e-09   1
RGD|1359267 - symbol:Ptbp2 "polypyrimidine tract binding ...   142  6.7e-09   1
UNIPROTKB|F1NRD6 - symbol:PTBP2 "Uncharacterized protein"...   142  6.7e-09   1
UNIPROTKB|E2RSK4 - symbol:PTBP2 "Uncharacterized protein"...   142  6.7e-09   1
UNIPROTKB|B4DSS8 - symbol:PTBP2 "Polypyrimidine tract-bin...   142  7.0e-09   1
UNIPROTKB|F1MPG6 - symbol:F1MPG6 "Uncharacterized protein...   140  1.1e-08   1
UNIPROTKB|Q06A95 - symbol:ROD1 "ROD1" species:9823 "Sus s...   140  1.1e-08   1
UNIPROTKB|E1C5J2 - symbol:E1C5J2 "Uncharacterized protein...   132  2.5e-08   1
UNIPROTKB|F1ND44 - symbol:F1ND44 "Uncharacterized protein...   132  4.2e-08   1
ZFIN|ZDB-GENE-030131-9796 - symbol:ptbp1b "polypyrimidine...   133  7.2e-08   1
ZFIN|ZDB-GENE-060810-49 - symbol:ptbp2b "polypyrimidine t...   132  8.2e-08   1
ZFIN|ZDB-GENE-050320-141 - symbol:ptbp2a "polypyrimidine ...   130  1.2e-07   1
ZFIN|ZDB-GENE-050522-492 - symbol:ptbp1a "polypyrimidine ...   125  5.1e-07   1
RGD|727953 - symbol:Smptb "polypyrimidine tract-binding p...   114  8.0e-06   1
TAIR|locus:2018630 - symbol:PTB3 "polypyrimidine tract-bi...   111  1.1e-05   1
TAIR|locus:2102142 - symbol:PTB1 "polypyrimidine tract-bi...   106  3.3e-05   1
TAIR|locus:2163746 - symbol:PTB2 "AT5G53180" species:3702...   102  0.00010   1
WB|WBGene00004207 - symbol:ptb-1 species:6239 "Caenorhabd...   103  0.00013   1
DICTYBASE|DDB_G0284321 - symbol:DDB_G0284321 "putative po...   103  0.00020   1


>FB|FBgn0011224 [details] [associations]
            symbol:heph "hephaestus" species:7227 "Drosophila
            melanogaster" [GO:0007286 "spermatid development" evidence=IMP]
            [GO:0008187 "poly-pyrimidine tract binding" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=ISS] [GO:0007219 "Notch
            signaling pathway" evidence=IMP] [GO:0008586 "imaginal disc-derived
            wing vein morphogenesis" evidence=IMP] [GO:0008587 "imaginal
            disc-derived wing margin morphogenesis" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0007319 "negative regulation of oskar mRNA
            translation" evidence=IMP] [GO:0008103 "oocyte microtubule
            cytoskeleton polarization" evidence=IMP] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IDA] [GO:0000900 "translation repressor activity,
            nucleic acid binding" evidence=IMP] [GO:0030529 "ribonucleoprotein
            complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:2001020 "regulation of response to DNA damage stimulus"
            evidence=IGI] [GO:0006974 "response to DNA damage stimulus"
            evidence=IMP] [GO:0007291 "sperm individualization" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008103 GO:GO:0000166 GO:GO:0008586
            Gene3D:3.30.70.330 GO:GO:0007291 GO:GO:0003730 GO:GO:0030529
            GO:GO:0000398 GO:GO:0000900 GO:GO:0008587 GO:GO:0007319
            GO:GO:0008187 CTD:9843 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 KO:K14948 UniGene:Dm.19417
            GeneID:48571 KEGG:dme:Dmel_CG31000 FlyBase:FBgn0011224 ChiTaRS:HEPH
            GenomeRNAi:48571 NextBio:839481 HSSP:P26599 EMBL:AY052367
            EMBL:BT030984 RefSeq:NP_001163787.1 RefSeq:NP_001163790.1
            RefSeq:NP_788780.1 SMR:Q95UI6 STRING:Q95UI6
            EnsemblMetazoa:FBtr0085881 EnsemblMetazoa:FBtr0300263
            EnsemblMetazoa:FBtr0300266 UCSC:CG31000-RH InParanoid:Q95UI6
            Uniprot:Q95UI6
        Length = 789

 Score = 172 (65.6 bits), Expect = 7.3e-12, P = 7.3e-12
 Identities = 32/50 (64%), Positives = 42/50 (84%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EMADE +A++MV+ +T    Q+RGR VYVQFSNH+ELKTDQ H+N+
Sbjct:   292 QAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNS 341


>UNIPROTKB|K7EKJ7 [details] [associations]
            symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
            Ensembl:ENST00000589575 Uniprot:K7EKJ7
        Length = 236

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 30/53 (56%), Positives = 39/53 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLL 60
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A  L
Sbjct:    96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQAAAL 148


>UNIPROTKB|K7ELW5 [details] [associations]
            symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
            Ensembl:ENST00000585535 Uniprot:K7ELW5
        Length = 233

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 29/51 (56%), Positives = 39/51 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNAL 58
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A+
Sbjct:    96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQAV 146


>UNIPROTKB|K7ES59 [details] [associations]
            symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
            Ensembl:ENST00000586481 Uniprot:K7ES59
        Length = 209

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    66 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 115


>UNIPROTKB|D4AB53 [details] [associations]
            symbol:Ptbp1 "Polypyrimidine tract-binding protein 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 RGD:62047 GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
            IPI:IPI00390801 Ensembl:ENSRNOT00000030365 ArrayExpress:D4AB53
            Uniprot:D4AB53
        Length = 528

 Score = 154 (59.3 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM+ E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSSPNQA 144


>UNIPROTKB|F1LM18 [details] [associations]
            symbol:Ptbp1 "Polypyrimidine tract-binding protein 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 RGD:62047 GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 IPI:IPI00562850
            Ensembl:ENSRNOT00000044865 ArrayExpress:F1LM18 Uniprot:F1LM18
        Length = 554

 Score = 154 (59.3 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM+ E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSSPNQA 144


>RGD|62047 [details] [associations]
            symbol:Ptbp1 "polypyrimidine tract binding protein 1"
           species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
           evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
           via spliceosome" evidence=ISO;ISS] [GO:0003697 "single-stranded DNA
           binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=IEA;TAS]
           [GO:0004519 "endonuclease activity" evidence=TAS] [GO:0005634
           "nucleus" evidence=IEA;ISO] [GO:0006397 "mRNA processing"
           evidence=IEA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0033119
           "negative regulation of RNA splicing" evidence=ISO] [GO:0036002
           "pre-mRNA binding" evidence=ISO] [GO:0048025 "negative regulation of
           mRNA splicing, via spliceosome" evidence=ISO;ISS] [GO:0051148
           "negative regulation of muscle cell differentiation"
           evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR006536
           InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:62047
           GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
           Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697 GO:GO:0004519
           GO:GO:0048025 GO:GO:0000381 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
           GO:GO:0051148 eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X60789
           EMBL:X60790 EMBL:X74565 IPI:IPI00231555 IPI:IPI00390239 PIR:S15552
           PIR:S36629 UniGene:Rn.64440 ProteinModelPortal:Q00438 SMR:Q00438
           STRING:Q00438 PhosphoSite:Q00438 PRIDE:Q00438 UCSC:RGD:62047
           InParanoid:Q00438 ChEMBL:CHEMBL2786 NextBio:609388
           ArrayExpress:Q00438 Genevestigator:Q00438
           GermOnline:ENSRNOG00000010448 Uniprot:Q00438
        Length = 555

 Score = 154 (59.3 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM+ E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSSPNQA 144


>UNIPROTKB|Q6P736 [details] [associations]
            symbol:Ptbp1 "Polypyrimidine tract binding protein 1,
            isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            RGD:62047 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH474029 TIGRFAMs:TIGR01649
            CTD:5725 HOVERGEN:HBG069548 KO:K13218 HOGENOM:HOG000231699
            OrthoDB:EOG4GMTXQ IPI:IPI00390239 UniGene:Rn.64440 EMBL:BC061858
            RefSeq:NP_001257986.1 RefSeq:NP_071961.2 SMR:Q6P736 STRING:Q6P736
            Ensembl:ENSRNOT00000030357 GeneID:29497 KEGG:rno:29497
            InParanoid:Q6P736 Genevestigator:Q6P736 Uniprot:Q6P736
        Length = 556

 Score = 154 (59.3 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM+ E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    95 QAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSSPNQA 144


>UNIPROTKB|A8YXY5 [details] [associations]
            symbol:PTBP1 "PTBP1 protein" species:9913 "Bos taurus"
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            UniGene:Bt.9031 HOVERGEN:HBG069548 EMBL:DAAA02020232 EMBL:BC103383
            IPI:IPI00968681 SMR:A8YXY5 Ensembl:ENSBTAT00000066124
            Uniprot:A8YXY5
        Length = 446

 Score = 151 (58.2 bits), Expect = 5.3e-10, P = 5.3e-10
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    96 QAFIEMHTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145


>UNIPROTKB|Q8WN55 [details] [associations]
            symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
            species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0051148 "negative regulation of muscle cell differentiation"
            evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0048025 "negative regulation of
            mRNA splicing, via spliceosome" evidence=IEA] [GO:0036002 "pre-mRNA
            binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0048025 GO:GO:0000381 GO:GO:0036002 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 EMBL:AF445640 IPI:IPI00712263
            RefSeq:NP_776867.1 UniGene:Bt.9031 ProteinModelPortal:Q8WN55
            SMR:Q8WN55 PRIDE:Q8WN55 Ensembl:ENSBTAT00000066209 GeneID:282018
            KEGG:bta:282018 CTD:5725 HOVERGEN:HBG069548 KO:K13218 OMA:SEECAQT
            NextBio:20805882 ArrayExpress:Q8WN55 GO:GO:0051148 Uniprot:Q8WN55
        Length = 531

 Score = 151 (58.2 bits), Expect = 7.2e-10, P = 7.2e-10
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    96 QAFIEMHTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145


>UNIPROTKB|P26599 [details] [associations]
            symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IDA] [GO:0051148 "negative regulation of
            muscle cell differentiation" evidence=IDA] [GO:0036002 "pre-mRNA
            binding" evidence=IDA] [GO:0033119 "negative regulation of RNA
            splicing" evidence=IDA] [GO:0048025 "negative regulation of mRNA
            splicing, via spliceosome" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
            [GO:0005730 "nucleolus" evidence=TAS] [GO:0008187 "poly-pyrimidine
            tract binding" evidence=TAS] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
            [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] Reactome:REACT_71 InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0000398 EMBL:CH471242
            GO:GO:0048025 GO:GO:0000381 GO:GO:0008187 GO:GO:0036002
            TIGRFAMs:TIGR01649 CTD:5725 HOVERGEN:HBG069548 KO:K13218
            OMA:SEECAQT GO:GO:0051148 EMBL:X62006 EMBL:X65371 EMBL:X65372
            EMBL:X60648 EMBL:X66975 EMBL:BT006819 EMBL:AC006273 EMBL:BC002397
            EMBL:BC004383 EMBL:BC013694 IPI:IPI00179964 IPI:IPI00183626
            IPI:IPI00334175 PIR:S23016 RefSeq:NP_002810.1 RefSeq:NP_114367.1
            RefSeq:NP_114368.1 UniGene:Hs.172550 PDB:1QM9 PDB:1SJQ PDB:1SJR
            PDB:2AD9 PDB:2ADB PDB:2ADC PDB:2EVZ PDB:3ZZY PDB:3ZZZ PDBsum:1QM9
            PDBsum:1SJQ PDBsum:1SJR PDBsum:2AD9 PDBsum:2ADB PDBsum:2ADC
            PDBsum:2EVZ PDBsum:3ZZY PDBsum:3ZZZ ProteinModelPortal:P26599
            SMR:P26599 IntAct:P26599 MINT:MINT-1348690 STRING:P26599
            PhosphoSite:P26599 DMDM:131528 SWISS-2DPAGE:P26599 PaxDb:P26599
            PRIDE:P26599 DNASU:5725 Ensembl:ENST00000349038
            Ensembl:ENST00000356948 Ensembl:ENST00000394601 GeneID:5725
            KEGG:hsa:5725 UCSC:uc002lpq.2 UCSC:uc002lpr.2 GeneCards:GC19P000797
            H-InvDB:HIX0137476 HGNC:HGNC:9583 HPA:CAB013507 MIM:600693
            neXtProt:NX_P26599 PharmGKB:PA33934 eggNOG:NOG263741
            HOGENOM:HOG000231699 ChEMBL:CHEMBL1293230 EvolutionaryTrace:P26599
            GenomeRNAi:5725 NextBio:22252 PMAP-CutDB:P26599 ArrayExpress:P26599
            Bgee:P26599 CleanEx:HS_PTBP1 Genevestigator:P26599
            GermOnline:ENSG00000011304 Uniprot:P26599
        Length = 531

 Score = 151 (58.2 bits), Expect = 7.2e-10, P = 7.2e-10
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145


>UNIPROTKB|J9P5T5 [details] [associations]
            symbol:PTBP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 CTD:5725 KO:K13218 EMBL:AAEX03012673
            RefSeq:XP_542215.2 ProteinModelPortal:J9P5T5
            Ensembl:ENSCAFT00000049054 GeneID:485097 KEGG:cfa:485097
            Uniprot:J9P5T5
        Length = 557

 Score = 151 (58.2 bits), Expect = 7.8e-10, P = 7.8e-10
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145


>UNIPROTKB|F1S6R7 [details] [associations]
            symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
            species:9823 "Sus scrofa" [GO:0051148 "negative regulation of
            muscle cell differentiation" evidence=IEA] [GO:0048025 "negative
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0048025 GO:GO:0000381
            GO:GO:0036002 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            OMA:SEECAQT GO:GO:0051148 EMBL:FP015903 Ensembl:ENSSSCT00000014665
            Uniprot:F1S6R7
        Length = 557

 Score = 151 (58.2 bits), Expect = 7.8e-10, P = 7.8e-10
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145


>UNIPROTKB|Q29099 [details] [associations]
            symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
            species:9823 "Sus scrofa" [GO:0051148 "negative regulation of
            muscle cell differentiation" evidence=ISS] [GO:0000381 "regulation
            of alternative mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0048025 GO:GO:0000381 TIGRFAMs:TIGR01649
            CTD:5725 HOVERGEN:HBG069548 KO:K13218 GO:GO:0051148
            eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X93009 PIR:S68857
            RefSeq:NP_999396.1 UniGene:Ssc.16210 ProteinModelPortal:Q29099
            SMR:Q29099 STRING:Q29099 PRIDE:Q29099 GeneID:397461 KEGG:ssc:397461
            OrthoDB:EOG4GMTXQ Uniprot:Q29099
        Length = 557

 Score = 151 (58.2 bits), Expect = 7.8e-10, P = 7.8e-10
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    96 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 145


>UNIPROTKB|F1PCJ7 [details] [associations]
            symbol:PTBP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0051148 "negative regulation of muscle cell
            differentiation" evidence=IEA] [GO:0048025 "negative regulation of
            mRNA splicing, via spliceosome" evidence=IEA] [GO:0036002 "pre-mRNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0048025 GO:GO:0000381
            GO:GO:0036002 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            OMA:SEECAQT GO:GO:0051148 EMBL:AAEX03012673
            Ensembl:ENSCAFT00000031317 Uniprot:F1PCJ7
        Length = 558

 Score = 151 (58.2 bits), Expect = 7.8e-10, P = 7.8e-10
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD + + A
Sbjct:    97 QAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQA 146


>UNIPROTKB|F6Q0P6 [details] [associations]
            symbol:PTBP2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000177 "regulation of neural precursor cell
            proliferation" evidence=IEA] [GO:0033119 "negative regulation of
            RNA splicing" evidence=IEA] [GO:0006376 "mRNA splice site
            selection" evidence=IEA] [GO:0005681 "spliceosomal complex"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0033119
            GO:GO:0006376 GeneTree:ENSGT00550000074508 EMBL:DAAA02007826
            IPI:IPI00876801 Ensembl:ENSBTAT00000011602 OMA:HICNACC
            Uniprot:F6Q0P6
        Length = 236

 Score = 142 (55.0 bits), Expect = 8.5e-10, P = 8.5e-10
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE+A E AA TMV Y++     LR + +Y+Q+SNHKELKTD T
Sbjct:    96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141


>UNIPROTKB|F1P5K0 [details] [associations]
            symbol:PTBP1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            EMBL:AADN02066656 EMBL:AADN02066657 EMBL:AADN02066658
            EMBL:AADN02066659 IPI:IPI00571435 Ensembl:ENSGALT00000003039
            ArrayExpress:F1P5K0 Uniprot:F1P5K0
        Length = 527

 Score = 149 (57.5 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+TT    LR + +Y+QFSNHKELKTD + + A
Sbjct:    66 QAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQA 115


>UNIPROTKB|E1BVR1 [details] [associations]
            symbol:PTBP1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0036002 "pre-mRNA binding"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0051148 "negative regulation of
            muscle cell differentiation" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0048025 GO:GO:0000381 GO:GO:0036002 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 OMA:SEECAQT GO:GO:0051148
            EMBL:AADN02066656 EMBL:AADN02066657 EMBL:AADN02066658
            EMBL:AADN02066659 IPI:IPI00684956 ProteinModelPortal:E1BVR1
            Ensembl:ENSGALT00000003042 ArrayExpress:E1BVR1 Uniprot:E1BVR1
        Length = 532

 Score = 149 (57.5 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM  E AA+TMV Y+TT    LR + +Y+QFSNHKELKTD + + A
Sbjct:    66 QAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQA 115


>MGI|MGI:97791 [details] [associations]
            symbol:Ptbp1 "polypyrimidine tract binding protein 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0033119 "negative regulation of RNA
            splicing" evidence=ISO] [GO:0036002 "pre-mRNA binding"
            evidence=ISO] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=ISO] [GO:0051148 "negative regulation of
            muscle cell differentiation" evidence=ISO] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:97791 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0048025
            GO:GO:0000381 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548 GO:GO:0051148
            eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X52101 IPI:IPI00749991
            UniGene:Mm.265610 ProteinModelPortal:P17225 SMR:P17225
            MINT:MINT-1862139 STRING:P17225 PhosphoSite:P17225 PaxDb:P17225
            PRIDE:P17225 ChiTaRS:PTBP1 CleanEx:MM_PTBP1 Genevestigator:P17225
            GermOnline:ENSMUSG00000006498 Uniprot:P17225
        Length = 527

 Score = 148 (57.2 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 28/46 (60%), Positives = 36/46 (78%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAF+EM  E AA+TMV Y+T+    LRG+ +Y+QFSNHKELKTD +
Sbjct:    95 QAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELKTDSS 140


>UNIPROTKB|F1LY02 [details] [associations]
            symbol:F1LY02 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00550000074508
            IPI:IPI00778797 Ensembl:ENSRNOT00000036047 Uniprot:F1LY02
        Length = 494

 Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 28/50 (56%), Positives = 40/50 (80%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAF+EM+   AA+TMV+Y+T+ V  LRG+ +Y+QFS+HKELKTD + + A
Sbjct:    90 QAFIEMSTVEAANTMVSYYTSVVPVLRGQPIYIQFSDHKELKTDNSPNQA 139


>UNIPROTKB|B4DI28 [details] [associations]
            symbol:PTBP2 "cDNA FLJ55578, highly similar to
            Polypyrimidine tract-binding protein 2" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
            HOGENOM:HOG000231699 EMBL:AL357150 IPI:IPI00647067
            UniGene:Hs.269895 UniGene:Hs.596061 HGNC:HGNC:17662 ChiTaRS:PTBP2
            EMBL:AK295384 SMR:B4DI28 STRING:B4DI28 Ensembl:ENST00000541987
            Uniprot:B4DI28
        Length = 325

 Score = 142 (55.0 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE+A E AA TMV Y++     LR + +Y+Q+SNHKELKTD T
Sbjct:    65 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 110


>ZFIN|ZDB-GENE-091116-1 [details] [associations]
            symbol:ptbp3 "polypyrimidine tract binding protein 3"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-091116-1 GO:GO:0005634
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 CTD:9991
            OMA:PPSVTMD EMBL:BX510369 EMBL:CR931761 IPI:IPI00493597
            RefSeq:XP_001335967.1 UniGene:Dr.40305 Ensembl:ENSDART00000040308
            Ensembl:ENSDART00000146727 GeneID:798982 KEGG:dre:798982
            NextBio:20933630 Uniprot:E7FB37
        Length = 522

 Score = 145 (56.1 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 27/44 (61%), Positives = 34/44 (77%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
             QAF+EMA E AA TMV Y+TT    +R + VY+Q+SNH+ELKTD
Sbjct:    66 QAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTD 109


>UNIPROTKB|O95758 [details] [associations]
            symbol:PTBP3 "Polypyrimidine tract-binding protein 3"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0043249 "erythrocyte maturation"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0045595 "regulation of cell
            differentiation" evidence=IEA] [GO:0033119 "negative regulation of
            RNA splicing" evidence=IDA] [GO:0009653 "anatomical structure
            morphogenesis" evidence=TAS] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0045595 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471105
            GO:GO:0033119 GO:GO:0009653 GO:GO:0043249 TIGRFAMs:TIGR01649
            HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
            OrthoDB:EOG4GMTXQ EMBL:AK001685 EMBL:AK302558 EMBL:CR749471
            EMBL:AL158824 EMBL:AL359073 EMBL:BC039896 EMBL:BC044585
            EMBL:BI463123 EMBL:AB023967 IPI:IPI00159072 IPI:IPI00384710
            IPI:IPI00470879 IPI:IPI00640632 IPI:IPI00915287 IPI:IPI00915299
            IPI:IPI00915400 RefSeq:NP_001157260.1 RefSeq:NP_001157262.1
            RefSeq:NP_001231826.1 RefSeq:NP_001231827.1 RefSeq:NP_005147.3
            UniGene:Hs.269988 ProteinModelPortal:O95758 SMR:O95758
            IntAct:O95758 STRING:O95758 PhosphoSite:O95758 PaxDb:O95758
            PRIDE:O95758 Ensembl:ENST00000210227 Ensembl:ENST00000334318
            Ensembl:ENST00000343327 Ensembl:ENST00000374255
            Ensembl:ENST00000374257 Ensembl:ENST00000458258 GeneID:9991
            KEGG:hsa:9991 UCSC:uc004bfv.3 UCSC:uc004bfw.3 UCSC:uc004bfx.3
            UCSC:uc004bfz.3 CTD:9991 GeneCards:GC09M114981 H-InvDB:HIX0008290
            HGNC:HGNC:10253 MIM:607527 neXtProt:NX_O95758 PharmGKB:PA34625
            OMA:PPSVTMD GenomeRNAi:9991 NextBio:37743 ArrayExpress:O95758
            Bgee:O95758 CleanEx:HS_ROD1 Genevestigator:O95758
            GermOnline:ENSG00000119314 Uniprot:O95758
        Length = 552

 Score = 144 (55.7 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 29/50 (58%), Positives = 35/50 (70%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAFLEMA E AA TMV Y+T     LR + VY+Q+SNH+ELKTD   + A
Sbjct:    96 QAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQA 145


>MGI|MGI:1923334 [details] [associations]
            symbol:Ptbp3 "polypyrimidine tract binding protein 3"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0033119 "negative regulation of
            RNA splicing" evidence=ISO] [GO:0043249 "erythrocyte maturation"
            evidence=IEA] [GO:0045595 "regulation of cell differentiation"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1923334
            GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0043249 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548 eggNOG:NOG263741
            HOGENOM:HOG000231699 OrthoDB:EOG4GMTXQ CTD:9991 EMBL:AK033732
            EMBL:AK088560 EMBL:AL824704 EMBL:BC006638 EMBL:BC057641
            IPI:IPI00221840 IPI:IPI00975110 RefSeq:NP_659153.2
            RefSeq:NP_835458.1 UniGene:Mm.331640 ProteinModelPortal:Q8BHD7
            SMR:Q8BHD7 STRING:Q8BHD7 PhosphoSite:Q8BHD7 PaxDb:Q8BHD7
            PRIDE:Q8BHD7 Ensembl:ENSMUST00000030076 Ensembl:ENSMUST00000148331
            Ensembl:ENSMUST00000172768 GeneID:230257 KEGG:mmu:230257
            UCSC:uc008szw.2 UCSC:uc008szx.2 InParanoid:A2ANH0 ChiTaRS:PTBP3
            NextBio:379861 Bgee:Q8BHD7 CleanEx:MM_ROD1 Genevestigator:Q8BHD7
            GermOnline:ENSMUSG00000028382 Uniprot:Q8BHD7
        Length = 523

 Score = 143 (55.4 bits), Expect = 5.1e-09, P = 5.1e-09
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAFLEMA E AA TM+ Y+T     LR + VY+Q+SNH+ELKTD   + A
Sbjct:    67 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQA 116


>RGD|621671 [details] [associations]
            symbol:Ptbp3 "polypyrimidine tract binding protein 3"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0033119 "negative
            regulation of RNA splicing" evidence=IEA;ISO] [GO:0043249
            "erythrocyte maturation" evidence=IEA] [GO:0045595 "regulation of
            cell differentiation" evidence=IMP] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            RGD:621671 GO:GO:0005634 GO:GO:0045595 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0033119
            GO:GO:0043249 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
            OrthoDB:EOG4GMTXQ CTD:9991 OMA:PPSVTMD EMBL:AB023966
            IPI:IPI00326775 RefSeq:NP_112636.1 UniGene:Rn.162818
            ProteinModelPortal:Q9Z118 SMR:Q9Z118 STRING:Q9Z118 PRIDE:Q9Z118
            Ensembl:ENSRNOT00000022107 GeneID:83515 KEGG:rno:83515
            UCSC:RGD:621671 InParanoid:Q9Z118 NextBio:615974
            Genevestigator:Q9Z118 GermOnline:ENSRNOG00000016334 Uniprot:Q9Z118
        Length = 523

 Score = 143 (55.4 bits), Expect = 5.1e-09, P = 5.1e-09
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAFLEMA E AA TM+ Y+T     LR + VY+Q+SNH+ELKTD   + A
Sbjct:    67 QAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQA 116


>UNIPROTKB|Q9UKA9 [details] [associations]
            symbol:PTBP2 "Polypyrimidine tract-binding protein 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005681
            "spliceosomal complex" evidence=IEA] [GO:0006376 "mRNA splice site
            selection" evidence=IEA] [GO:2000177 "regulation of neural
            precursor cell proliferation" evidence=IEA] [GO:0033119 "negative
            regulation of RNA splicing" evidence=IDA] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
            GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649 KO:K14948
            HOVERGEN:HBG069548 eggNOG:NOG263741 EMBL:AF176085 EMBL:AB051232
            EMBL:AB051233 EMBL:AF530580 EMBL:AF530581 EMBL:AF530582
            EMBL:AF530583 EMBL:BK000526 EMBL:AL357150 EMBL:BC016582
            IPI:IPI00254162 IPI:IPI00514064 IPI:IPI00641664 IPI:IPI00647067
            IPI:IPI00743676 IPI:IPI00748295 RefSeq:NP_067013.1
            UniGene:Hs.269895 UniGene:Hs.596061 PDB:2CQ1 PDBsum:2CQ1
            ProteinModelPortal:Q9UKA9 SMR:Q9UKA9 IntAct:Q9UKA9
            MINT:MINT-1483252 STRING:Q9UKA9 PhosphoSite:Q9UKA9 DMDM:74761983
            REPRODUCTION-2DPAGE:IPI00647067 PaxDb:Q9UKA9 PRIDE:Q9UKA9
            DNASU:58155 Ensembl:ENST00000236228 Ensembl:ENST00000370197
            Ensembl:ENST00000370198 Ensembl:ENST00000426398 GeneID:58155
            KEGG:hsa:58155 UCSC:uc001drn.2 UCSC:uc001dro.2 UCSC:uc001drq.3
            UCSC:uc001drr.3 CTD:58155 GeneCards:GC01P097187 HGNC:HGNC:17662
            HPA:HPA047420 MIM:608449 neXtProt:NX_Q9UKA9 PharmGKB:PA33935
            OrthoDB:EOG473PSG ChiTaRS:PTBP2 EvolutionaryTrace:Q9UKA9
            GenomeRNAi:58155 NextBio:64859 ArrayExpress:Q9UKA9 Bgee:Q9UKA9
            CleanEx:HS_PTBP2 Genevestigator:Q9UKA9 GermOnline:ENSG00000117569
            Uniprot:Q9UKA9
        Length = 531

 Score = 142 (55.0 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE+A E AA TMV Y++     LR + +Y+Q+SNHKELKTD T
Sbjct:    96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141


>MGI|MGI:1860489 [details] [associations]
            symbol:Ptbp2 "polypyrimidine tract binding protein 2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=IDA] [GO:0006376 "mRNA splice site selection"
            evidence=IMP;IDA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0033119 "negative
            regulation of RNA splicing" evidence=ISO] [GO:2000177 "regulation
            of neural precursor cell proliferation" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1860489 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0033119
            GO:GO:0006376 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            GO:GO:2000177 KO:K14948 HOVERGEN:HBG069548 eggNOG:NOG263741
            HOGENOM:HOG000231699 CTD:58155 OrthoDB:EOG473PSG ChiTaRS:PTBP2
            EMBL:AF095718 EMBL:AK013734 EMBL:AK137348 EMBL:BC010255
            EMBL:AY333752 EMBL:BK000527 IPI:IPI00136002 IPI:IPI00751759
            RefSeq:NP_062423.1 UniGene:Mm.29966 ProteinModelPortal:Q91Z31
            SMR:Q91Z31 IntAct:Q91Z31 STRING:Q91Z31 PhosphoSite:Q91Z31
            PaxDb:Q91Z31 PRIDE:Q91Z31 Ensembl:ENSMUST00000029780 GeneID:56195
            KEGG:mmu:56195 UCSC:uc008rdi.1 UCSC:uc008rdk.2 InParanoid:Q91Z31
            OMA:QSQLAMS NextBio:312010 Bgee:Q91Z31 CleanEx:MM_PTBP2
            Genevestigator:Q91Z31 GermOnline:ENSMUSG00000028134 Uniprot:Q91Z31
        Length = 531

 Score = 142 (55.0 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE+A E AA TMV Y++     LR + +Y+Q+SNHKELKTD T
Sbjct:    96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141


>RGD|1359267 [details] [associations]
            symbol:Ptbp2 "polypyrimidine tract binding protein 2"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO]
            [GO:0005681 "spliceosomal complex" evidence=IEA;ISO] [GO:0006376
            "mRNA splice site selection" evidence=IEA;ISO] [GO:0033119
            "negative regulation of RNA splicing" evidence=IEA;ISO] [GO:2000177
            "regulation of neural precursor cell proliferation"
            evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1359267
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
            GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 KO:K14948 HOVERGEN:HBG069548
            eggNOG:NOG263741 HOGENOM:HOG000231699 CTD:58155 OrthoDB:EOG473PSG
            EMBL:AJ010585 EMBL:BC082076 EMBL:AY333750 IPI:IPI00471764
            IPI:IPI00758469 RefSeq:NP_001005555.1 UniGene:Rn.64916
            ProteinModelPortal:Q66H20 SMR:Q66H20 STRING:Q66H20 PRIDE:Q66H20
            Ensembl:ENSRNOT00000015036 GeneID:310820 KEGG:rno:310820
            UCSC:RGD:1359267 InParanoid:Q66H20 NextBio:662705
            Genevestigator:Q66H20 GermOnline:ENSRNOG00000010827 Uniprot:Q66H20
        Length = 531

 Score = 142 (55.0 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE+A E AA TMV Y++     LR + +Y+Q+SNHKELKTD T
Sbjct:    96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141


>UNIPROTKB|F1NRD6 [details] [associations]
            symbol:PTBP2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
            evidence=IEA] [GO:0006376 "mRNA splice site selection"
            evidence=IEA] [GO:0033119 "negative regulation of RNA splicing"
            evidence=IEA] [GO:2000177 "regulation of neural precursor cell
            proliferation" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0033119
            GO:GO:0006376 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            OMA:QSQLAMS EMBL:AADN02012892 IPI:IPI00602746
            Ensembl:ENSGALT00000008906 ArrayExpress:F1NRD6 Uniprot:F1NRD6
        Length = 532

 Score = 142 (55.0 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE+A E AA TMV Y++     LR + +Y+Q+SNHKELKTD T
Sbjct:    96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141


>UNIPROTKB|E2RSK4 [details] [associations]
            symbol:PTBP2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000177 "regulation of neural precursor cell
            proliferation" evidence=IEA] [GO:0033119 "negative regulation of
            RNA splicing" evidence=IEA] [GO:0006376 "mRNA splice site
            selection" evidence=IEA] [GO:0005681 "spliceosomal complex"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
            GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 OMA:QSQLAMS EMBL:AAEX03004787
            EMBL:AAEX03004788 EMBL:AAEX03004789 EMBL:AAEX03004790
            ProteinModelPortal:E2RSK4 PRIDE:E2RSK4 Ensembl:ENSCAFT00000031985
            Uniprot:E2RSK4
        Length = 532

 Score = 142 (55.0 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE+A E AA TMV Y++     LR + +Y+Q+SNHKELKTD T
Sbjct:    96 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 141


>UNIPROTKB|B4DSS8 [details] [associations]
            symbol:PTBP2 "Polypyrimidine tract-binding protein 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
            HOVERGEN:HBG069548 HOGENOM:HOG000231699 EMBL:AL357150
            IPI:IPI00254162 UniGene:Hs.269895 UniGene:Hs.596061 HGNC:HGNC:17662
            ChiTaRS:PTBP2 OMA:QSQLAMS EMBL:AK299897 SMR:B4DSS8 STRING:B4DSS8
            Ensembl:ENST00000394184 UCSC:uc010otz.1 Uniprot:B4DSS8
        Length = 548

 Score = 142 (55.0 bits), Expect = 7.0e-09, P = 7.0e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE+A E AA TMV Y++     LR + +Y+Q+SNHKELKTD T
Sbjct:   107 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNT 152


>UNIPROTKB|F1MPG6 [details] [associations]
            symbol:F1MPG6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0033119 "negative regulation of RNA splicing"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0033119 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            OMA:PPSVTMD EMBL:DAAA02024547 IPI:IPI00700660
            Ensembl:ENSBTAT00000022272 Uniprot:F1MPG6
        Length = 523

 Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAFLEMA E AA TMV Y+T     LR + V++Q+SNH+ELKTD   + A
Sbjct:    65 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTDNLPNQA 114


>UNIPROTKB|Q06A95 [details] [associations]
            symbol:ROD1 "ROD1" species:9823 "Sus scrofa" [GO:0033119
            "negative regulation of RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0033119 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548 eggNOG:NOG263741
            HOGENOM:HOG000231699 OrthoDB:EOG4GMTXQ OMA:PPSVTMD EMBL:CU234201
            EMBL:DQ972969 RefSeq:NP_001070683.1 UniGene:Ssc.16910 SMR:Q06A95
            Ensembl:ENSSSCT00000006012 GeneID:768100 KEGG:ssc:768100
            CTD:100701891 Uniprot:Q06A95
        Length = 523

 Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAFLEMA E AA TMV Y+T     LR + V++Q+SNH+ELKTD   + A
Sbjct:    65 QAFLEMASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTDNLPNQA 114


>UNIPROTKB|E1C5J2 [details] [associations]
            symbol:E1C5J2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 EMBL:AADN02057711 EMBL:AADN02057712
            EMBL:AADN02057713 IPI:IPI00822931 Ensembl:ENSGALT00000037624
            ArrayExpress:E1C5J2 Uniprot:E1C5J2
        Length = 288

 Score = 132 (51.5 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAFLEMA E  A +MV Y +T +  +  + VYVQ+SNH+ELKTD   S A
Sbjct:    79 QAFLEMASEENAVSMVNYCSTAIPHIHNQPVYVQYSNHRELKTDSLPSQA 128


>UNIPROTKB|F1ND44 [details] [associations]
            symbol:F1ND44 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0033119 "negative regulation of RNA splicing" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0033119
            TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 EMBL:AADN02057711
            EMBL:AADN02057712 EMBL:AADN02057713 IPI:IPI00604250
            Ensembl:ENSGALT00000025267 OMA:FLEMASI ArrayExpress:F1ND44
            Uniprot:F1ND44
        Length = 364

 Score = 132 (51.5 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNA 57
             QAFLEMA E  A +MV Y +T +  +  + VYVQ+SNH+ELKTD   S A
Sbjct:    95 QAFLEMASEENAVSMVNYCSTAIPHIHNQPVYVQYSNHRELKTDSLPSQA 144


>ZFIN|ZDB-GENE-030131-9796 [details] [associations]
            symbol:ptbp1b "polypyrimidine tract binding
            protein 1b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-9796
            GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
            eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:BC091854 IPI:IPI00613822
            UniGene:Dr.75263 ProteinModelPortal:Q58EL3 STRING:Q58EL3
            InParanoid:Q58EL3 ArrayExpress:Q58EL3 Bgee:Q58EL3 Uniprot:Q58EL3
        Length = 586

 Score = 133 (51.9 bits), Expect = 7.2e-08, P = 7.2e-08
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLEM  E AA TMVTY+++    +R   +++Q+SNHKELKTD +
Sbjct:   130 QAFLEMNSEEAAQTMVTYYSSVTPVIRNHPIFMQYSNHKELKTDNS 175


>ZFIN|ZDB-GENE-060810-49 [details] [associations]
            symbol:ptbp2b "polypyrimidine tract binding protein
            2b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-060810-49 GO:GO:0005634
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 KO:K14948
            HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
            OrthoDB:EOG4GMTXQ EMBL:BX005269 IPI:IPI00855280
            RefSeq:NP_001093477.1 UniGene:Dr.75530 SMR:A5PM68
            Ensembl:ENSDART00000038648 GeneID:562434 KEGG:dre:562434 CTD:562434
            OMA:YTAVTPQ NextBio:20884409 Uniprot:A5PM68
        Length = 538

 Score = 132 (51.5 bits), Expect = 8.2e-08, P = 8.2e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTD 51
             QAFLE+  E AA TMV Y+T    Q+R   V++Q+SNHKELKTD
Sbjct:    91 QAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELKTD 134


>ZFIN|ZDB-GENE-050320-141 [details] [associations]
            symbol:ptbp2a "polypyrimidine tract binding protein
            2a" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-050320-141
            GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            EMBL:CU896585 IPI:IPI00996240 Ensembl:ENSDART00000123275
            Bgee:F1QG05 Uniprot:F1QG05
        Length = 512

 Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 25/46 (54%), Positives = 33/46 (71%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLE++ E AA TMV Y++     +R   VY+Q+SNHKELKTD +
Sbjct:    97 QAFLELSTEEAAMTMVNYYSAVTPHVRSVPVYIQYSNHKELKTDNS 142


>ZFIN|ZDB-GENE-050522-492 [details] [associations]
            symbol:ptbp1a "polypyrimidine tract binding protein
            1a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0060472 "positive regulation of cortical granule exocytosis by
            elevation of cytosolic calcium ion concentration" evidence=IMP]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
            [GO:0045746 "negative regulation of Notch signaling pathway"
            evidence=IMP] [GO:0060729 "intestinal epithelial structure
            maintenance" evidence=IMP] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-050522-492 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0009953 GO:GO:0045746
            TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548
            KO:K13218 OMA:SEECAQT eggNOG:NOG263741 HOGENOM:HOG000231699
            OrthoDB:EOG4GMTXQ GO:GO:0060729 EMBL:CR788230 EMBL:BC095372
            IPI:IPI00607308 RefSeq:NP_001018313.1 UniGene:Dr.45492 SMR:Q503D3
            Ensembl:ENSDART00000017668 GeneID:323490 KEGG:dre:323490 CTD:323490
            InParanoid:Q503D3 NextBio:20808275 GO:GO:0060472 Uniprot:Q503D3
        Length = 574

 Score = 125 (49.1 bits), Expect = 5.1e-07, P = 5.1e-07
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQT 53
             QAFLEM  E +A TMV+Y+++    +R   +++Q+SNHKELKTD +
Sbjct:   111 QAFLEMNTEESAQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNS 156


>RGD|727953 [details] [associations]
            symbol:Smptb "polypyrimidine tract-binding protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000380 "alternative mRNA splicing, via spliceosome"
            evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR000504 InterPro:IPR006536
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:727953
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0000380 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
            HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
            OrthoDB:EOG4GMTXQ HSSP:P26599 EMBL:CH474078 EMBL:AY223520
            IPI:IPI00331913 RefSeq:NP_877970.1 UniGene:Rn.97598 SMR:Q80XZ1
            Ensembl:ENSRNOT00000014611 GeneID:302879 KEGG:rno:302879
            UCSC:RGD:727953 CTD:302879 NextBio:650282 Genevestigator:Q80XZ1
            Uniprot:Q80XZ1
        Length = 588

 Score = 114 (45.2 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 22/53 (41%), Positives = 37/53 (69%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLL 60
             QAF+EM+ E +A+TM+ Y+T     LRG+ V++QF++++ELK   + S  + L
Sbjct:    66 QAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISL 118


>TAIR|locus:2018630 [details] [associations]
            symbol:PTB3 "polypyrimidine tract-binding protein 3"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
            body" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0006417 "regulation of translation" evidence=IEP] [GO:0043484
            "regulation of RNA splicing" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006417 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0043484 GO:GO:0000932 EMBL:AC005687 KO:K14948
            eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:BT014899 EMBL:BT015028
            IPI:IPI00544143 RefSeq:NP_001077672.1 RefSeq:NP_175010.2
            UniGene:At.22472 ProteinModelPortal:Q6ICX4 SMR:Q6ICX4 STRING:Q6ICX4
            PaxDb:Q6ICX4 PRIDE:Q6ICX4 EnsemblPlants:AT1G43190.1
            EnsemblPlants:AT1G43190.2 GeneID:840918 KEGG:ath:AT1G43190
            GeneFarm:5076 TAIR:At1g43190 InParanoid:Q6ICX4 OMA:IKMHNHK
            PhylomeDB:Q6ICX4 ProtClustDB:CLSN2690441 Genevestigator:Q6ICX4
            GermOnline:AT1G43190 Uniprot:Q6ICX4
        Length = 432

 Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 33/81 (40%), Positives = 47/81 (58%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKT-DQT-HS-----NALLL 60
             QA L+M D  +A + + +FT     +RGR VYVQFS+H+EL T +Q  H      N +LL
Sbjct:    43 QALLQMQDVSSAVSALQFFTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILL 102

Query:    61 HLTIGIILRPATHYQVHLIRS 81
              +TI  +L P T   +H + S
Sbjct:   103 -VTIHHMLYPITVDVLHQVFS 122


>TAIR|locus:2102142 [details] [associations]
            symbol:PTB1 "polypyrimidine tract-binding protein 1"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0009846 "pollen germination" evidence=IGI] [GO:0000932
            "cytoplasmic mRNA processing body" evidence=IDA] [GO:0006417
            "regulation of translation" evidence=IEP] [GO:0043484 "regulation
            of RNA splicing" evidence=IDA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IMP]
            [GO:0009845 "seed germination" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0043484 GO:GO:0000932 GO:GO:0009846 EMBL:AC008261
            EMBL:AF076924 IPI:IPI00548173 PIR:T51814 RefSeq:NP_186764.1
            UniGene:At.18320 ProteinModelPortal:Q9MAC5 SMR:Q9MAC5 STRING:Q9MAC5
            PaxDb:Q9MAC5 PRIDE:Q9MAC5 EnsemblPlants:AT3G01150.1 GeneID:821129
            KEGG:ath:AT3G01150 GeneFarm:5074 TAIR:At3g01150 eggNOG:NOG307589
            HOGENOM:HOG000238077 InParanoid:Q9MAC5 KO:K14948 OMA:ESHEVSI
            PhylomeDB:Q9MAC5 ProtClustDB:CLSN2684978 Genevestigator:Q9MAC5
            GermOnline:AT3G01150 Uniprot:Q9MAC5
        Length = 399

 Score = 106 (42.4 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 28/80 (35%), Positives = 46/80 (57%)

Query:     8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNA---LLLHL 62
             QAF+E AD   A +MV+Y+ +    AQ+RG+ VY+Q+SN  E+  +Q+  +    +LL  
Sbjct:    56 QAFVEFADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVT 115

Query:    63 TIGIILRPATHYQVHLIRSA 82
               G+     +   +HL+ SA
Sbjct:   116 FEGVESHEVSIDVIHLVFSA 135


>TAIR|locus:2163746 [details] [associations]
            symbol:PTB2 "AT5G53180" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0009846 "pollen germination" evidence=IGI] [GO:0000932
            "cytoplasmic mRNA processing body" evidence=IDA] [GO:0006417
            "regulation of translation" evidence=IEP] [GO:0043484 "regulation
            of RNA splicing" evidence=IDA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IMP]
            [GO:0009845 "seed germination" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006417 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0043484 GO:GO:0000932 GO:GO:0009846 EMBL:AB025622
            HOGENOM:HOG000238077 KO:K14948 EMBL:BT015760 EMBL:BT020199
            IPI:IPI00533493 RefSeq:NP_200130.1 UniGene:At.43107
            ProteinModelPortal:Q9FGL9 SMR:Q9FGL9 IntAct:Q9FGL9 STRING:Q9FGL9
            PaxDb:Q9FGL9 PRIDE:Q9FGL9 EnsemblPlants:AT5G53180.1 GeneID:835399
            KEGG:ath:AT5G53180 GeneFarm:5075 TAIR:At5g53180 eggNOG:NOG263807
            InParanoid:Q9FGL9 OMA:KKMEPES PhylomeDB:Q9FGL9
            ProtClustDB:CLSN2720458 Genevestigator:Q9FGL9 GermOnline:AT5G53180
            Uniprot:Q9FGL9
        Length = 429

 Score = 102 (41.0 bits), Expect = 0.00010, P = 0.00010
 Identities = 28/80 (35%), Positives = 49/80 (61%)

Query:     8 QAFLEMADECAASTMVTYFTTCV--AQLRGRAVYVQFSNHKELKTDQTHSNAL--LLHLT 63
             QAF+E  D   A  M++Y+ +    AQ+RG+ VY+Q+SN +E+  ++T ++ +  +L +T
Sbjct:    57 QAFIEFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVT 116

Query:    64 I-GIILRPATHYQVHLIRSA 82
             I G   R  +   +HL+ SA
Sbjct:   117 IEGDDARMVSIDVLHLVFSA 136


>WB|WBGene00004207 [details] [associations]
            symbol:ptb-1 species:6239 "Caenorhabditis elegans"
            [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
            InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0000398 EMBL:Z36948 TIGRFAMs:TIGR01649
            GeneTree:ENSGT00550000074508 eggNOG:NOG263741 HOGENOM:HOG000231699
            OMA:IKMHNHK PIR:A88299 PIR:T20381 RefSeq:NP_741041.1 HSSP:P26599
            ProteinModelPortal:Q18999 SMR:Q18999 DIP:DIP-24857N IntAct:Q18999
            MINT:MINT-1089938 STRING:Q18999 PaxDb:Q18999 PRIDE:Q18999
            EnsemblMetazoa:D2089.4a GeneID:174647 KEGG:cel:CELE_D2089.4
            UCSC:D2089.4a CTD:174647 WormBase:D2089.4a InParanoid:Q18999
            NextBio:884900 ArrayExpress:Q18999 Uniprot:Q18999
        Length = 615

 Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQ 52
             QAF+E  +E +A+  V+  T    Q+RGR ++ Q+S H+ELK D+
Sbjct:   158 QAFVEYEEEASAAAFVSGMTAVPIQIRGRTLFAQYSTHRELKFDK 202


>DICTYBASE|DDB_G0284321 [details] [associations]
            symbol:DDB_G0284321 "putative polypyrimidine tract
            binding protein (PTBP1)" species:44689 "Dictyostelium discoideum"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
            dictyBase:DDB_G0284321 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AAFI02000064 eggNOG:NOG263741 OMA:DATENEI
            RefSeq:XP_638677.1 ProteinModelPortal:Q54PW8 SMR:Q54PW8
            EnsemblProtists:DDB0233645 GeneID:8624506 KEGG:ddi:DDB_G0284321
            InParanoid:Q54PW8 Uniprot:Q54PW8
        Length = 892

 Score = 103 (41.3 bits), Expect = 0.00020, P = 0.00020
 Identities = 20/57 (35%), Positives = 35/57 (61%)

Query:     8 QAFLEMADECAASTMVTYFTTCVAQLRGRAVYVQFSNHKELKTDQTHSNALLLHLTI 64
             QA ++M +  +A++ + Y+TT    +R + +Y QFSN KE+   +   N +LL +TI
Sbjct:   350 QALVQMVELSSATSFIQYYTTVQGSIRSKIIYAQFSNRKEISPAKETPNCILL-VTI 405


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.330   0.137   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       94        94   0.00091  102 3  11 22  0.38    29
                                                     29  0.42    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  45
  No. of states in DFA:  520 (55 KB)
  Total size of DFA:  108 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.44u 0.10s 9.54t   Elapsed:  00:00:07
  Total cpu time:  9.44u 0.10s 9.54t   Elapsed:  00:00:07
  Start:  Thu Aug 15 17:01:18 2013   End:  Thu Aug 15 17:01:25 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with heph heph heph hephaestus	protein from Drosophila melanogaster	7.3e-12
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Homo sapiens	4.5e-11
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Homo sapiens	5.8e-11
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Homo sapiens	7.4e-11
BLAST match view associations BLAST with Ptbp1 Ptbp1 Ptbp1 Polypyrimidine tract-binding protein 1	protein from Rattus norvegicus	3.7e-10
BLAST match view associations BLAST with Ptbp1 Ptbp1 Ptbp1 polypyrimidine tract binding protein 1	gene from Rattus norvegicus	3.7e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Bos taurus	5.3e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Bos taurus	7.2e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Homo sapiens	7.2e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Uncharacterized protein	protein from Canis lupus familiaris	7.8e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Sus scrofa	7.8e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Polypyrimidine tract-binding protein 1	protein from Sus scrofa	7.8e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Uncharacterized protein	protein from Canis lupus familiaris	7.8e-10
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Uncharacterized protein	protein from Bos taurus	8.5e-10
BLAST match view associations BLAST with PTBP1 PTBP1 PTBP1 Uncharacterized protein	protein from Gallus gallus	1.2e-09
BLAST match view associations BLAST with Ptbp1 Ptbp1 Ptbp1 polypyrimidine tract binding protein 1	protein from Mus musculus	1.5e-09
BLAST match view associations BLAST with F1LY02 F1LY02 F1LY02 Uncharacterized protein	protein from Rattus norvegicus	1.7e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Polypyrimidine tract-binding protein 2	protein from Homo sapiens	2.6e-09
BLAST match view associations BLAST with ptbp3 ptbp3 ptbp3 polypyrimidine tract binding protein 3	gene_product from Danio rerio	3.1e-09
BLAST match view associations BLAST with PTBP3 PTBP3 PTBP3 Polypyrimidine tract-binding protein 3	protein from Homo sapiens	4.3e-09
BLAST match view associations BLAST with Ptbp3 Ptbp3 Ptbp3 polypyrimidine tract binding protein 3	protein from Mus musculus	5.1e-09
BLAST match view associations BLAST with Ptbp3 Ptbp3 Ptbp3 polypyrimidine tract binding protein 3	gene from Rattus norvegicus	5.1e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Polypyrimidine tract-binding protein 2	protein from Homo sapiens	6.7e-09
BLAST match view associations BLAST with Ptbp2 Ptbp2 Ptbp2 polypyrimidine tract binding protein 2	protein from Mus musculus	6.7e-09
BLAST match view associations BLAST with Ptbp2 Ptbp2 Ptbp2 polypyrimidine tract binding protein 2	gene from Rattus norvegicus	6.7e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Uncharacterized protein	protein from Gallus gallus	6.7e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Uncharacterized protein	protein from Canis lupus familiaris	6.7e-09
BLAST match view associations BLAST with PTBP2 PTBP2 PTBP2 Polypyrimidine tract-binding protein 2	protein from Homo sapiens	7.0e-09
BLAST match view associations BLAST with F1MPG6 F1MPG6 F1MPG6 Uncharacterized protein	protein from Bos taurus	1.1e-08
BLAST match view associations BLAST with ROD1 ROD1 ROD1	protein from Sus scrofa	1.1e-08
BLAST match view associations BLAST with ROD1 ROD1 ROD1 Uncharacterized protein	protein from Gallus gallus	4.2e-08
BLAST match view associations BLAST with ptbp1b ptbp1b ptbp1b polypyrimidine tract binding protein 1b	gene_product from Danio rerio	7.2e-08
BLAST match view associations BLAST with ptbp2b ptbp2b ptbp2b polypyrimidine tract binding protein 2b	gene_product from Danio rerio	8.2e-08
BLAST match view associations BLAST with ptbp2a ptbp2a ptbp2a polypyrimidine tract binding protein 2a	gene_product from Danio rerio	1.2e-07
BLAST match view associations BLAST with ptbp1a ptbp1a ptbp1a polypyrimidine tract binding protein 1a	gene_product from Danio rerio	5.1e-07
BLAST match view associations BLAST with Smptb Smptb Smptb polypyrimidine tract-binding protein	gene from Rattus norvegicus	8.0e-06
BLAST match view associations BLAST with PTB3 PTB3 PTB3 AT1G43190	protein from Arabidopsis thaliana	1.1e-05
BLAST match view associations BLAST with PTB1 PTB1 PTB1 AT3G01150	protein from Arabidopsis thaliana	3.3e-05
BLAST match view associations BLAST with PTB2 PTB2 PTB2 AT5G53180	protein from Arabidopsis thaliana	0.00010
BLAST match view associations BLAST with ptb-1 ptb-1 ptb-1	gene from Caenorhabditis elegans	0.00013
BLAST match view associations BLAST with DDB_G0284321 DDB_G0284321 DDB_G0284321 putative polypyrimidine tract binding protein (PTBP1)	gene from Dictyostelium discoideum	0.00020