BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9171
(118 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189241313|ref|XP_966484.2| PREDICTED: similar to polypyrimidine tract binding protein
[Tribolium castaneum]
Length = 822
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+ KLD+Q + KPSRVIHIRNIPN+V+EAEI+HLGIPFGRVTNVLVLKGKNQ L + E
Sbjct: 288 KVKLDQQNNVGKPSRVIHIRNIPNDVSEAEIVHLGIPFGRVTNVLVLKGKNQAFLEMGEE 347
>gi|270013160|gb|EFA09608.1| hypothetical protein TcasGA2_TC011728 [Tribolium castaneum]
Length = 876
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+ KLD+Q + KPSRVIHIRNIPN+V+EAEI+HLGIPFGRVTNVLVLKGKNQ L + E
Sbjct: 340 KVKLDQQNNVGKPSRVIHIRNIPNDVSEAEIVHLGIPFGRVTNVLVLKGKNQAFLEMGEE 399
>gi|322802929|gb|EFZ23070.1| hypothetical protein SINV_06072 [Solenopsis invicta]
Length = 127
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 13 VMVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLL 70
++ Q KLD+ S KPSRVIHIRNIPNEVTEAEIIHLG+PFGRVTNVLVLKGKNQ L
Sbjct: 35 FLLFQVKLDKSHSG-KPSRVIHIRNIPNEVTEAEIIHLGLPFGRVTNVLVLKGKNQYL 91
>gi|328712478|ref|XP_001947870.2| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Acyrthosiphon pisum]
Length = 613
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
KLD+ ++ KPSRVIHIRNIPNEVTEAE+IHLGIPFG+VTNVLVLKGKNQ L + E
Sbjct: 71 KLDKTANN-KPSRVIHIRNIPNEVTEAEVIHLGIPFGKVTNVLVLKGKNQAFLEMADET 128
>gi|328712476|ref|XP_003244820.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 581
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
KLD+ ++ KPSRVIHIRNIPNEVTEAE+IHLGIPFG+VTNVLVLKGKNQ L + E
Sbjct: 39 KLDKTANN-KPSRVIHIRNIPNEVTEAEVIHLGIPFGKVTNVLVLKGKNQAFLEMADET 96
>gi|328712480|ref|XP_003244821.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 3
[Acyrthosiphon pisum]
Length = 632
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
KLD+ ++ KPSRVIHIRNIPNEVTEAE+IHLGIPFG+VTNVLVLKGKNQ L + E
Sbjct: 71 KLDKTANN-KPSRVIHIRNIPNEVTEAEVIHLGIPFGKVTNVLVLKGKNQAFLEMADET 128
>gi|345496639|ref|XP_001603240.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Nasonia
vitripennis]
Length = 587
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+AKLD+ ++ KPSRVIHIRNIPNEV+E EIIHLG+PFGRVTNVLVLKGKNQ L + E
Sbjct: 62 KAKLDKSQNG-KPSRVIHIRNIPNEVSEGEIIHLGMPFGRVTNVLVLKGKNQAFLEMADE 120
>gi|321470924|gb|EFX81898.1| hypothetical protein DAPPUDRAFT_302853 [Daphnia pulex]
Length = 540
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 24 KSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+S KPSRV+HIRNIPN+VTEAEI+HLGIPFGRVTNVLVLKGKNQ L + E
Sbjct: 28 RSPAKPSRVVHIRNIPNDVTEAEIVHLGIPFGRVTNVLVLKGKNQAFLEMADE 80
>gi|383854458|ref|XP_003702738.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Megachile
rotundata]
Length = 196
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQL 69
KLD+ + KPSRVIHIRNIPNEV+E EIIHLG+PFGRVTNVLVLKGKNQL
Sbjct: 49 KLDKSH-NGKPSRVIHIRNIPNEVSEGEIIHLGVPFGRVTNVLVLKGKNQL 98
>gi|307694571|gb|ADN84938.1| hephaestus [Biston betularia]
Length = 181
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 43/50 (86%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
KPSRVIHIRNIPNE TEAEII LG+PFGRVTNVLVLKGKNQ L + EI
Sbjct: 9 KPSRVIHIRNIPNETTEAEIIQLGLPFGRVTNVLVLKGKNQAFLEMAEEI 58
>gi|380018871|ref|XP_003693343.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Apis
florea]
Length = 578
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KLD+ + K SRVIHIRNIPNEV+E EIIHLGIPFGRVTNVLVLKGKNQ L + E
Sbjct: 64 KLDKSHNG-KLSRVIHIRNIPNEVSEGEIIHLGIPFGRVTNVLVLKGKNQAFLEMADE 120
>gi|242023546|ref|XP_002432193.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
gi|212517590|gb|EEB19455.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
Length = 513
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KLD+ + + KPS+VIHIRNIP++V+E EIIHLGIPFGRVTNVLVLKGKNQ+ L A
Sbjct: 18 KLDKNQ-NVKPSKVIHIRNIPSDVSEPEIIHLGIPFGRVTNVLVLKGKNQVRYELSAS 74
>gi|340726548|ref|XP_003401618.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
terrestris]
Length = 578
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KLD+ + K SRVIHIRNIPNEV+E EIIHLG+PFGRVTNVLVLKGKNQ L + E
Sbjct: 64 KLDKSHNG-KLSRVIHIRNIPNEVSEGEIIHLGVPFGRVTNVLVLKGKNQAFLEMADE 120
>gi|350418407|ref|XP_003491847.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
impatiens]
Length = 578
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KLD+ + K SRVIHIRNIPNEV+E EIIHLG+PFGRVTNVLVLKGKNQ L + E
Sbjct: 64 KLDKSHNG-KLSRVIHIRNIPNEVSEGEIIHLGVPFGRVTNVLVLKGKNQAFLEMADE 120
>gi|170042024|ref|XP_001848742.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167865565|gb|EDS28948.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 572
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/53 (67%), Positives = 44/53 (83%)
Query: 24 KSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+S KPSRV+HIRNIPNE +E +++HLG+PFGRVTNVLVLKGKNQ L + E
Sbjct: 17 RSTSKPSRVVHIRNIPNESSEVDVMHLGVPFGRVTNVLVLKGKNQAFLEMADE 69
>gi|157137151|ref|XP_001663911.1| polypyrimidine tract binding protein [Aedes aegypti]
gi|108869791|gb|EAT34016.1| AAEL013723-PA [Aedes aegypti]
Length = 539
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D + S KPSRV+HIRNIPNE +E +++HLG+PFGRVTNVLVLKGKNQ L + E
Sbjct: 3 KTDTRLSVPKPSRVVHIRNIPNESSEVDVMHLGVPFGRVTNVLVLKGKNQAFLEMADE 60
>gi|357623431|gb|EHJ74585.1| putative polypyrimidine tract binding protein [Danaus plexippus]
Length = 621
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/41 (92%), Positives = 39/41 (95%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
KPSRVIHIRNIPNE TEAEII LG+PFGRVTNVLVLKGKNQ
Sbjct: 71 KPSRVIHIRNIPNETTEAEIIQLGLPFGRVTNVLVLKGKNQ 111
>gi|170028938|ref|XP_001842351.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167879401|gb|EDS42784.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 535
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KPSRV+HIRNIPNE +E +++HLG+PFGRVTNVLVLKGKNQ L + E
Sbjct: 20 KPSRVVHIRNIPNESSEVDVMHLGVPFGRVTNVLVLKGKNQAFLEMADE 68
>gi|442755235|gb|JAA69777.1| Putative polypyrimidine tract binding protein 1 [Ixodes ricinus]
Length = 274
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
KPSRV+HIRNIPN+ T+ +I+HLGIPFG+VTNVL LKGKNQ L + E
Sbjct: 92 KPSRVVHIRNIPNDATDTDIVHLGIPFGKVTNVLQLKGKNQAFLEMSDEA 141
>gi|241997960|ref|XP_002433623.1| polypyrimidine tract binding protein, putative [Ixodes
scapularis]
gi|215495382|gb|EEC05023.1| polypyrimidine tract binding protein, putative [Ixodes
scapularis]
Length = 512
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KPSRV+HIRNIPN+ T+ +I+HLGIPFG+VTNVL LKGKNQ L + E
Sbjct: 47 KPSRVVHIRNIPNDATDTDIVHLGIPFGKVTNVLQLKGKNQAFLEMSDE 95
>gi|312378791|gb|EFR25262.1| hypothetical protein AND_09562 [Anopheles darlingi]
Length = 399
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 48/73 (65%), Gaps = 8/73 (10%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE--------IIH 79
K SRV+HIRNIPNE +E EI+HLG+PFGRVTNVLVLKGKNQ + + E + H
Sbjct: 6 KTSRVVHIRNIPNESSEVEIMHLGLPFGRVTNVLVLKGKNQAFIEMADESAASAMVSMFH 65
Query: 80 LGIPFGRVTNVLV 92
PF R V V
Sbjct: 66 ANPPFVRGRTVYV 78
>gi|427789193|gb|JAA60048.1| Putative hephaestus [Rhipicephalus pulchellus]
Length = 559
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KPSRV+HIRNIPN+ T+ +I+HLG+PFG+VTNVL LKGKNQ L + E
Sbjct: 88 KPSRVVHIRNIPNDATDTDIVHLGVPFGKVTNVLQLKGKNQAFLEMADE 136
>gi|427796833|gb|JAA63868.1| Putative hephaestus, partial [Rhipicephalus pulchellus]
Length = 554
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KPSRV+HIRNIPN+ T+ +I+HLG+PFG+VTNVL LKGKNQ L + E
Sbjct: 83 KPSRVVHIRNIPNDATDTDIVHLGVPFGKVTNVLQLKGKNQAFLEMADE 131
>gi|347970969|ref|XP_318405.4| AGAP003945-PA [Anopheles gambiae str. PEST]
gi|333469570|gb|EAA13599.5| AGAP003945-PA [Anopheles gambiae str. PEST]
Length = 601
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K SRV+HIRNIPNEV+EAEI+ LG+PFGRVTNVLVLKGKNQ + + E
Sbjct: 69 KTSRVVHIRNIPNEVSEAEIMQLGLPFGRVTNVLVLKGKNQAFIEMGDE 117
>gi|157838029|ref|NP_001093477.1| polypyrimidine tract-binding protein 2 [Danio rerio]
Length = 538
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
D PSRVIHIR +PNEV+E E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 49 DSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTE 99
>gi|62088112|dbj|BAD92503.1| polypyrimidine tract binding protein 2 variant [Homo sapiens]
Length = 177
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 72 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 126
>gi|327263703|ref|XP_003216657.1| PREDICTED: regulator of differentiation 1-like [Anolis
carolinensis]
Length = 558
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K +S PSRV+H+R IPN+VTEAE+I LG+PFGRVTN+L+LKGK+Q L + +E
Sbjct: 53 KFKGDRSPCSPSRVLHLRKIPNDVTEAEVISLGLPFGRVTNLLMLKGKSQAFLEMASE 110
>gi|74193172|dbj|BAE20599.1| unnamed protein product [Mus musculus]
gi|74193487|dbj|BAE20681.1| unnamed protein product [Mus musculus]
gi|74193495|dbj|BAE20685.1| unnamed protein product [Mus musculus]
Length = 241
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|149025820|gb|EDL82063.1| polypyrimidine tract binding protein 2, isoform CRA_c [Rattus
norvegicus]
Length = 243
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|195505570|ref|XP_002099562.1| GE23291 [Drosophila yakuba]
gi|194185663|gb|EDW99274.1| GE23291 [Drosophila yakuba]
Length = 802
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
D K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 264 DAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 315
>gi|16580751|dbj|BAB71743.1| PTB-like protein S [Homo sapiens]
gi|119593415|gb|EAW73009.1| polypyrimidine tract binding protein 2, isoform CRA_e [Homo
sapiens]
Length = 356
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|338725424|ref|XP_001490156.3| PREDICTED: polypyrimidine tract-binding protein 2 [Equus
caballus]
gi|402855346|ref|XP_003892287.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Papio anubis]
gi|194379976|dbj|BAG58340.1| unnamed protein product [Homo sapiens]
Length = 325
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 19 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 73
>gi|344255742|gb|EGW11846.1| Polypyrimidine tract-binding protein 2 [Cricetulus griseus]
Length = 212
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 19 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 73
>gi|187608032|ref|NP_001120518.1| polypyrimidine tract binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|170287806|gb|AAI61422.1| LOC100145652 protein [Xenopus (Silurana) tropicalis]
Length = 519
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K +S PSRV+HIR IPN+VTE+EII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 16 KFKGDRSPCSPSRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 73
>gi|119579506|gb|EAW59102.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Homo
sapiens]
Length = 482
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEII 78
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEA 78
Query: 79 HLGIPFGRV-TNVLVLKG--KNQVSLISGYRNRQSAALMMIIK 118
+ + V + L L G N+ +++ G QS L +II+
Sbjct: 79 AVTMAVSAVQSGSLALSGGPSNEGTVLPG----QSPVLRIIIE 117
>gi|158519869|ref|NP_001103551.1| polypyrimidine tract-binding protein 2 [Bos taurus]
gi|158455056|gb|AAI22581.1| PTBP2 protein [Bos taurus]
Length = 255
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|118094291|ref|XP_422322.2| PREDICTED: polypyrimidine tract-binding protein 2 [Gallus gallus]
Length = 531
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGSPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|432915659|ref|XP_004079197.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 523
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+HIR +PNEVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 43 PSRVLHIRKLPNEVTETEVIALGLPFGKVTNILMLKGKNQAFLELGTE 90
>gi|351704481|gb|EHB07400.1| Polypyrimidine tract-binding protein 2 [Heterocephalus glaber]
Length = 539
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|327270713|ref|XP_003220133.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Anolis
carolinensis]
Length = 531
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|326925087|ref|XP_003208753.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Meleagris
gallopavo]
Length = 531
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|410967802|ref|XP_003990404.1| PREDICTED: polypyrimidine tract-binding protein 2 [Felis catus]
Length = 566
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 84 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 138
>gi|53850638|ref|NP_001005555.1| polypyrimidine tract-binding protein 2 [Rattus norvegicus]
gi|81910658|sp|Q66H20.1|PTBP2_RAT RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=PTB-like protein
gi|93140675|sp|Q91Z31.2|PTBP2_MOUSE RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Brain-enriched polypyrimidine tract-binding
protein; Short=Brain-enriched PTB; AltName: Full=Neural
polypyrimidine tract-binding protein; AltName:
Full=RRM-type RNA-binding protein brPTB
gi|51859313|gb|AAH82076.1| Polypyrimidine tract binding protein 2 [Rattus norvegicus]
gi|149025819|gb|EDL82062.1| polypyrimidine tract binding protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 531
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|395821711|ref|XP_003784180.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Otolemur garnettii]
Length = 531
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|10863997|ref|NP_067013.1| polypyrimidine tract-binding protein 2 [Homo sapiens]
gi|332221969|ref|XP_003260137.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Nomascus leucogenys]
gi|332809589|ref|XP_001157727.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
troglodytes]
gi|345801645|ref|XP_547270.3| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Canis
lupus familiaris]
gi|397474047|ref|XP_003808502.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
paniscus]
gi|426330454|ref|XP_004026226.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|74761983|sp|Q9UKA9.1|PTBP2_HUMAN RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=Neurally-enriched homolog of PTB; AltName:
Full=PTB-like protein
gi|6492336|gb|AAF14284.1|AF176085_1 neural polypyrimidine tract binding protein [Homo sapiens]
gi|22711855|tpg|DAA00060.1| TPA_exp: splicing regulator nPTB1 [Homo sapiens]
gi|119593411|gb|EAW73005.1| polypyrimidine tract binding protein 2, isoform CRA_a [Homo
sapiens]
gi|380815182|gb|AFE79465.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|384948520|gb|AFI37865.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|410298260|gb|JAA27730.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 531
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|9507003|ref|NP_062423.1| polypyrimidine tract-binding protein 2 [Mus musculus]
gi|8358154|gb|AAF21807.2|AF095718_1 RRM-type RNA-binding protein brPTB [Mus musculus]
gi|5824110|emb|CAB54073.1| PTB-like protein [Rattus rattus]
gi|22711857|tpg|DAA00061.1| TPA_exp: splicing regulator nPTB2 [Mus musculus]
gi|74209570|dbj|BAE23317.1| unnamed protein product [Mus musculus]
Length = 532
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|297279324|ref|XP_001105316.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 6
[Macaca mulatta]
gi|22218306|gb|AAM94625.1| non-neuronal splice variant nPTB4 [Homo sapiens]
gi|119593412|gb|EAW73006.1| polypyrimidine tract binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 536
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|25392158|pir||JC7526 polypyrimidine tract-binding protein-like protein - rat
Length = 532
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|440902651|gb|ELR53420.1| Polypyrimidine tract-binding protein 2, partial [Bos grunniens
mutus]
Length = 524
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 37 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 91
>gi|301758643|ref|XP_002915171.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Ailuropoda
melanoleuca]
gi|395730215|ref|XP_002810624.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pongo
abelii]
gi|22218304|gb|AAM94624.1| non-neuronal splice variant nPTB3 [Homo sapiens]
gi|119593414|gb|EAW73008.1| polypyrimidine tract binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 537
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|16580749|dbj|BAB71742.1| PTB-like protein L [Homo sapiens]
gi|16741546|gb|AAH16582.1| Polypyrimidine tract binding protein 2 [Homo sapiens]
gi|119593413|gb|EAW73007.1| polypyrimidine tract binding protein 2, isoform CRA_c [Homo
sapiens]
gi|123980248|gb|ABM81953.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|157928112|gb|ABW03352.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|410216174|gb|JAA05306.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
gi|410328831|gb|JAA33362.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 532
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|403283993|ref|XP_003933374.1| PREDICTED: polypyrimidine tract-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 95 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 149
>gi|390466248|ref|XP_003733548.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 2 [Callithrix jacchus]
Length = 499
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 58 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 112
>gi|17864284|ref|NP_524703.1| hephaestus, isoform C [Drosophila melanogaster]
gi|281362954|ref|NP_001163791.1| hephaestus, isoform S [Drosophila melanogaster]
gi|281362956|ref|NP_001163792.1| hephaestus, isoform T [Drosophila melanogaster]
gi|281362958|ref|NP_001163793.1| hephaestus, isoform U [Drosophila melanogaster]
gi|6665714|gb|AAF22979.1|AF211191_1 polypyrimidine tract binding protein [Drosophila melanogaster]
gi|23172814|gb|AAN14296.1| hephaestus, isoform C [Drosophila melanogaster]
gi|272477268|gb|ACZ95084.1| hephaestus, isoform S [Drosophila melanogaster]
gi|272477269|gb|ACZ95085.1| hephaestus, isoform T [Drosophila melanogaster]
gi|272477270|gb|ACZ95086.1| hephaestus, isoform U [Drosophila melanogaster]
Length = 581
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 44 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 93
>gi|355745467|gb|EHH50092.1| hypothetical protein EGM_00861, partial [Macaca fascicularis]
Length = 529
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 47 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 101
>gi|148680404|gb|EDL12351.1| polypyrimidine tract binding protein 2, isoform CRA_a [Mus
musculus]
Length = 528
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 47 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 101
>gi|148680405|gb|EDL12352.1| polypyrimidine tract binding protein 2, isoform CRA_b [Mus
musculus]
Length = 529
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 47 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 101
>gi|159163853|pdb|2CQ1|A Chain A, Solution Structure Of Rna Binding Domain In Ptb-Like
Protein L
Length = 101
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%)
Query: 23 QKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 8 DKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 61
>gi|344293564|ref|XP_003418492.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Loxodonta
africana]
Length = 686
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 199 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 253
>gi|402855348|ref|XP_003892288.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Papio anubis]
Length = 506
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 19 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 73
>gi|426330458|ref|XP_004026228.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3
[Gorilla gorilla gorilla]
Length = 548
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 61 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 115
>gi|345801647|ref|XP_003434832.1| PREDICTED: polypyrimidine tract-binding protein 2 [Canis lupus
familiaris]
Length = 540
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 58 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 112
>gi|328788961|ref|XP_003251212.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Apis
mellifera]
Length = 100
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
KLD+ + K SRVIHIRNIP +V+E EIIHLGIPFGRVTNVLVLKGKNQ
Sbjct: 49 KLDKSH-NGKLSRVIHIRNIPKKVSEGEIIHLGIPFGRVTNVLVLKGKNQ 97
>gi|354504008|ref|XP_003514071.1| PREDICTED: polypyrimidine tract-binding protein 2-like
[Cricetulus griseus]
Length = 501
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 19 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 73
>gi|395821709|ref|XP_003784179.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Otolemur garnettii]
Length = 540
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 58 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 112
>gi|194389558|dbj|BAG61740.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 61 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 115
>gi|195575404|ref|XP_002105669.1| GD16206 [Drosophila simulans]
gi|194201596|gb|EDX15172.1| GD16206 [Drosophila simulans]
Length = 792
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 255 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 304
>gi|332809593|ref|XP_003308280.1| PREDICTED: polypyrimidine tract-binding protein 2 [Pan troglodytes]
gi|397474051|ref|XP_003808504.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3 [Pan
paniscus]
Length = 548
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 61 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 115
>gi|161079544|ref|NP_001097993.1| hephaestus, isoform M [Drosophila melanogaster]
gi|16589094|gb|AAL27010.1|AF436844_1 hephaestus [Drosophila melanogaster]
gi|158030461|gb|ABW08817.1| hephaestus, isoform M [Drosophila melanogaster]
Length = 568
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 31 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 80
>gi|297279326|ref|XP_001105013.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 2
[Macaca mulatta]
gi|332809591|ref|XP_001158089.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 7 [Pan
troglodytes]
gi|395730217|ref|XP_003775687.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pongo
abelii]
gi|397474049|ref|XP_003808503.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pan
paniscus]
gi|426330456|ref|XP_004026227.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 540
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 58 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 112
>gi|291398459|ref|XP_002715890.1| PREDICTED: polypyrimidine tract binding protein 2 [Oryctolagus
cuniculus]
Length = 536
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGTPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|449508136|ref|XP_002190438.2| PREDICTED: polypyrimidine tract-binding protein 2 [Taeniopygia
guttata]
Length = 537
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 41/53 (77%)
Query: 24 KSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 52 KMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|426216016|ref|XP_004002265.1| PREDICTED: polypyrimidine tract-binding protein 2 [Ovis aries]
Length = 510
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 22 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 76
>gi|332221975|ref|XP_003260140.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Nomascus leucogenys]
Length = 568
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 81 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 135
>gi|432103873|gb|ELK30706.1| Polypyrimidine tract-binding protein 2 [Myotis davidii]
Length = 538
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 16 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 70
>gi|348586487|ref|XP_003479000.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cavia
porcellus]
Length = 581
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 99 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 153
>gi|348540154|ref|XP_003457553.1| PREDICTED: polypyrimidine tract-binding protein 2-like
[Oreochromis niloticus]
Length = 511
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +PNE +EAE+I LG+PFG+VTN+L LKGKNQ L + E
Sbjct: 51 PSRVIHIRKLPNEASEAEVIALGLPFGKVTNILTLKGKNQAFLEMGTE 98
>gi|281349698|gb|EFB25282.1| hypothetical protein PANDA_003123 [Ailuropoda melanoleuca]
Length = 501
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 14 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 68
>gi|45552115|ref|NP_788776.2| hephaestus, isoform G [Drosophila melanogaster]
gi|45446737|gb|AAO41623.2| hephaestus, isoform G [Drosophila melanogaster]
Length = 615
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 78 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 127
>gi|24651780|ref|NP_733460.1| hephaestus, isoform B [Drosophila melanogaster]
gi|28571963|ref|NP_733461.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28571967|ref|NP_788773.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28571969|ref|NP_788774.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28571971|ref|NP_788777.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28571973|ref|NP_788778.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28571975|ref|NP_788779.1| hephaestus, isoform K [Drosophila melanogaster]
gi|28571979|ref|NP_788775.1| hephaestus, isoform F [Drosophila melanogaster]
gi|161079548|ref|NP_001097994.1| hephaestus, isoform N [Drosophila melanogaster]
gi|281362948|ref|NP_001163788.1| hephaestus, isoform P [Drosophila melanogaster]
gi|281362960|ref|NP_001163794.1| hephaestus, isoform V [Drosophila melanogaster]
gi|18042167|gb|AAL57860.1|AF455053_1 hephaestus [Drosophila melanogaster]
gi|23172813|gb|AAF57208.2| hephaestus, isoform B [Drosophila melanogaster]
gi|28381525|gb|AAN14297.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28381526|gb|AAO41620.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28381527|gb|AAO41621.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28381528|gb|AAO41622.1| hephaestus, isoform F [Drosophila melanogaster]
gi|28381530|gb|AAO41624.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28381531|gb|AAO41625.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28381532|gb|AAO41626.1| hephaestus, isoform K [Drosophila melanogaster]
gi|158030462|gb|ABW08818.1| hephaestus, isoform N [Drosophila melanogaster]
gi|189182140|gb|ACD81846.1| LD11808p [Drosophila melanogaster]
gi|272477265|gb|ACZ95081.1| hephaestus, isoform P [Drosophila melanogaster]
gi|272477271|gb|ACZ95087.1| hephaestus, isoform V [Drosophila melanogaster]
Length = 608
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 71 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 120
>gi|386766857|ref|NP_001247399.1| hephaestus, isoform Y [Drosophila melanogaster]
gi|383293058|gb|AFH06716.1| hephaestus, isoform Y [Drosophila melanogaster]
Length = 898
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 365 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 414
>gi|296489304|tpg|DAA31417.1| TPA: polypyrimidine tract binding protein 2-like [Bos taurus]
Length = 496
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 19 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 73
>gi|334324359|ref|XP_001381834.2| PREDICTED: polypyrimidine tract-binding protein 2-like [Monodelphis
domestica]
Length = 640
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/53 (64%), Positives = 41/53 (77%)
Query: 24 KSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 155 KMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 207
>gi|161079541|ref|NP_001097992.1| hephaestus, isoform L [Drosophila melanogaster]
gi|158030460|gb|ABW08816.1| hephaestus, isoform L [Drosophila melanogaster]
Length = 622
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 85 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 134
>gi|345306392|ref|XP_001508115.2| PREDICTED: polypyrimidine tract-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 606
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 124 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 178
>gi|410043020|ref|XP_003951546.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 558
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 53 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 110
>gi|441622594|ref|XP_003264050.2| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 3 isoform 1 [Nomascus leucogenys]
Length = 555
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 50 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 107
>gi|343959136|dbj|BAK63423.1| regulator of differentiation 1 [Pan troglodytes]
Length = 524
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 76
>gi|297685129|ref|XP_002820148.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pongo
abelii]
Length = 558
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 53 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 110
>gi|395740824|ref|XP_002820149.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pongo
abelii]
Length = 555
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 50 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 107
>gi|395740821|ref|XP_002820150.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3
[Pongo abelii]
Length = 524
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 76
>gi|349732192|ref|NP_001231827.1| polypyrimidine tract-binding protein 3 isoform 6 [Homo sapiens]
gi|114626184|ref|XP_001149612.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 5 [Pan
troglodytes]
gi|397479183|ref|XP_003810907.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pan
paniscus]
gi|27882560|gb|AAH44585.1| ROD1 protein [Homo sapiens]
gi|119579503|gb|EAW59099.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Homo
sapiens]
Length = 558
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 53 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 110
>gi|355567525|gb|EHH23866.1| hypothetical protein EGK_07422, partial [Macaca mulatta]
Length = 558
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 53 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 110
>gi|402896665|ref|XP_003911411.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3
[Papio anubis]
Length = 521
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 16 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 73
>gi|402896661|ref|XP_003911409.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Papio anubis]
Length = 524
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 76
>gi|426362706|ref|XP_004048496.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
gi|4514554|dbj|BAA75466.1| Rod1 [Homo sapiens]
Length = 521
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 16 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 73
>gi|255003738|ref|NP_001157260.1| polypyrimidine tract-binding protein 3 isoform 2 [Homo sapiens]
gi|397479181|ref|XP_003810906.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
paniscus]
gi|410043017|ref|XP_003951545.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan
troglodytes]
gi|194380114|dbj|BAG63824.1| unnamed protein product [Homo sapiens]
Length = 524
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 76
>gi|355753108|gb|EHH57154.1| hypothetical protein EGM_06734, partial [Macaca fascicularis]
Length = 539
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 34 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 91
>gi|402896663|ref|XP_003911410.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Papio
anubis]
Length = 555
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 50 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 107
>gi|38569466|ref|NP_005147.3| polypyrimidine tract-binding protein 3 isoform 1 [Homo sapiens]
gi|218511814|sp|O95758.2|PTBP3_HUMAN RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|119579504|gb|EAW59100.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
gi|119579505|gb|EAW59101.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
Length = 552
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 47 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 104
>gi|255003744|ref|NP_001157262.1| polypyrimidine tract-binding protein 3 isoform 3 [Homo sapiens]
gi|114626182|ref|XP_528390.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 6 [Pan
troglodytes]
gi|397479185|ref|XP_003810908.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pan
paniscus]
gi|51476645|emb|CAH18301.1| hypothetical protein [Homo sapiens]
Length = 555
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 50 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 107
>gi|344271491|ref|XP_003407571.1| PREDICTED: regulator of differentiation 1 [Loxodonta africana]
Length = 581
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IPN+VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 76 KFKGDRPPCSPSRVLHLRKIPNDVTEAEVISLGLPFGKVTNLLILKGKSQAFLEMASE 133
>gi|17861972|gb|AAL39463.1| LD03185p [Drosophila melanogaster]
Length = 571
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 71 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 120
>gi|28571965|ref|NP_788780.1| hephaestus, isoform H [Drosophila melanogaster]
gi|281362946|ref|NP_001163787.1| hephaestus, isoform O [Drosophila melanogaster]
gi|281362952|ref|NP_001163790.1| hephaestus, isoform R [Drosophila melanogaster]
gi|16303586|gb|AAL14775.1| hephaestus [Drosophila melanogaster]
gi|28381533|gb|AAO41627.1| hephaestus, isoform H [Drosophila melanogaster]
gi|157816746|gb|ABV82366.1| LD04329p [Drosophila melanogaster]
gi|272477264|gb|ACZ95080.1| hephaestus, isoform O [Drosophila melanogaster]
gi|272477267|gb|ACZ95083.1| hephaestus, isoform R [Drosophila melanogaster]
Length = 789
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 252 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 301
>gi|386766855|ref|NP_001247398.1| hephaestus, isoform W [Drosophila melanogaster]
gi|383293057|gb|AFH06715.1| hephaestus, isoform W [Drosophila melanogaster]
Length = 799
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 266 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 315
>gi|195354540|ref|XP_002043755.1| GM16408 [Drosophila sechellia]
gi|194128955|gb|EDW50998.1| GM16408 [Drosophila sechellia]
Length = 792
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 255 KASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 304
>gi|297270365|ref|XP_001099980.2| PREDICTED: regulator of differentiation 1-like [Macaca mulatta]
Length = 860
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 355 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 412
>gi|348531446|ref|XP_003453220.1| PREDICTED: polypyrimidine tract-binding protein 2-like
[Oreochromis niloticus]
Length = 523
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+HIR +PNEV+E E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 43 PSRVLHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTE 90
>gi|25058871|gb|AAH39896.1| Similar to ROD1 regulator of differentiation 1 (S. pombe), partial
[Homo sapiens]
Length = 618
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 90 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 147
>gi|73959499|ref|XP_866820.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Canis lupus familiaris]
gi|119593416|gb|EAW73010.1| polypyrimidine tract binding protein 2, isoform CRA_f [Homo
sapiens]
Length = 480
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 2 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 52
>gi|431896401|gb|ELK05813.1| Polypyrimidine tract-binding protein 2 [Pteropus alecto]
Length = 485
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 2 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 52
>gi|4001819|gb|AAC94999.1| putative polypyrimidine tract-binding protein [Carassius auratus]
Length = 165
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 23 QKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
++S PSRV+HIR +P EV+EAE++ LG+PFG+VTN+L+LKGKNQ L + +E
Sbjct: 73 ERSPCDPSRVLHIRRVPIEVSEAEVVTLGVPFGKVTNLLLLKGKNQAFLEMASE 126
>gi|395514526|ref|XP_003761466.1| PREDICTED: polypyrimidine tract-binding protein 3 [Sarcophilus
harrisii]
Length = 505
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K +S PSRV+H+R IPN+VTE E+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 26 KFKGDRSPCSPSRVLHLRKIPNDVTETEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 83
>gi|118404352|ref|NP_001072479.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
gi|112418598|gb|AAI21904.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
Length = 531
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 24 KSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 52 KMEAAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 104
>gi|195446082|ref|XP_002070619.1| GK10936 [Drosophila willistoni]
gi|194166704|gb|EDW81605.1| GK10936 [Drosophila willistoni]
Length = 629
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE E+++I LGIPFGRVTNVLVLKGKNQ + + E+
Sbjct: 31 KASKVIHLRNIPNESGESDVISLGIPFGRVTNVLVLKGKNQAFIEMADEV 80
>gi|349732190|ref|NP_001231826.1| polypyrimidine tract-binding protein 3 isoform 5 [Homo sapiens]
Length = 547
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 76
>gi|426362704|ref|XP_004048495.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 591
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 56 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 113
>gi|410043023|ref|XP_003951547.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan
troglodytes]
Length = 554
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASE 76
>gi|194740822|ref|XP_001952889.1| GF17502 [Drosophila ananassae]
gi|190625948|gb|EDV41472.1| GF17502 [Drosophila ananassae]
Length = 835
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+V+H+RNIPNE E+++I LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 263 KASKVVHLRNIPNESGESDVIALGIPFGRVTNVLVLKGKNQAFIEMADEI 312
>gi|410933304|ref|XP_003980031.1| PREDICTED: polypyrimidine tract-binding protein 2-like, partial
[Takifugu rubripes]
Length = 345
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+HIR +PNE TE EII LG+PFG+VTN+L LKGKNQ L + E
Sbjct: 28 PSRVLHIRKLPNEATETEIIALGLPFGKVTNILTLKGKNQAFLEMGTE 75
>gi|223647466|gb|ACN10491.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 540
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 21 DRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
DR +S PSRV+HIR +P+EV+E E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 44 DRMES--PPSRVLHIRKLPSEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTE 97
>gi|66472746|ref|NP_001018313.1| polypyrimidine tract binding protein 1a [Danio rerio]
gi|63100731|gb|AAH95372.1| Polypyrimidine tract binding protein 1a [Danio rerio]
Length = 574
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +PN++ EAE+I LG+PFG+VTN+L+LKGKNQ L + E
Sbjct: 72 PSRVIHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTE 119
>gi|213513374|ref|NP_001133504.1| polypyrimidine tract-binding protein 2 [Salmo salar]
gi|209154262|gb|ACI33363.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 520
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+HIR +PNE +E E+I LG+PFG+VTN+L LKGKNQ L L E
Sbjct: 56 PSRVLHIRKLPNETSETEVIALGLPFGKVTNILTLKGKNQAFLELGTE 103
>gi|195055925|ref|XP_001994863.1| GH17472 [Drosophila grimshawi]
gi|193892626|gb|EDV91492.1| GH17472 [Drosophila grimshawi]
Length = 920
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE E++++ LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 380 KASKVIHLRNIPNESGESDVVALGIPFGRVTNVLVLKGKNQAFIEMADEI 429
>gi|194212378|ref|XP_001915461.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Equus caballus]
Length = 596
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +PN+VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 104 PSRVIHIRKLPNDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 151
>gi|444509522|gb|ELV09317.1| Polypyrimidine tract-binding protein 1, partial [Tupaia
chinensis]
Length = 522
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 24 KSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+S PSRVIHIR +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + AE
Sbjct: 40 RSAGTPSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNAE 92
>gi|334332915|ref|XP_001376108.2| PREDICTED: regulator of differentiation 1 [Monodelphis domestica]
Length = 582
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K +S PSRV+H+R IPN+VTE E+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 77 KFKGDRSPCSPSRVLHLRKIPNDVTETEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 134
>gi|395513379|ref|XP_003760903.1| PREDICTED: polypyrimidine tract-binding protein 1 [Sarcophilus
harrisii]
Length = 557
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P +VTEAE+I LG+PFG+VTN+L+LKGKNQ L + E
Sbjct: 57 PSRVIHVRKLPGDVTEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTE 104
>gi|387017724|gb|AFJ50980.1| Polypyrimidine tract-binding protein 1-like [Crotalus adamanteus]
Length = 556
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTEAE+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|449273011|gb|EMC82640.1| Polypyrimidine tract-binding protein 1, partial [Columba livia]
Length = 525
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTEAE+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 19 PSRVIHIRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 66
>gi|90075792|dbj|BAE87576.1| unnamed protein product [Macaca fascicularis]
Length = 226
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I L +PFG+VTN+L+LKGKNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALKLPFGKVTNILMLKGKNQAFLELATE 104
>gi|334326796|ref|XP_001375584.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Monodelphis
domestica]
Length = 557
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P +VTEAE+I LG+PFG+VTN+L+LKGKNQ L + E
Sbjct: 57 PSRVIHVRKLPGDVTEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTE 104
>gi|195110769|ref|XP_001999952.1| GI22798 [Drosophila mojavensis]
gi|193916546|gb|EDW15413.1| GI22798 [Drosophila mojavensis]
Length = 834
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE E++++ LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 291 KASKVIHLRNIPNESGESDVVALGIPFGRVTNVLVLKGKNQAFIEMADEI 340
>gi|410897873|ref|XP_003962423.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Takifugu rubripes]
Length = 577
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R +PN++ EAE+I LG+PFG+VTN+L+LKGKNQ L L +E
Sbjct: 72 PSRVVHVRKLPNDINEAEVIGLGLPFGKVTNLLMLKGKNQAFLELNSE 119
>gi|410897871|ref|XP_003962422.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Takifugu rubripes]
Length = 575
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R +PN++ EAE+I LG+PFG+VTN+L+LKGKNQ L L +E
Sbjct: 70 PSRVVHVRKLPNDINEAEVIGLGLPFGKVTNLLMLKGKNQAFLELNSE 117
>gi|390178277|ref|XP_003736615.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859388|gb|EIM52688.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 572
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIPFGRV 87
K S+VIH+RNIPNE E+++I LG+PFGRVTNVLVLKGKNQ + + E+ +
Sbjct: 31 KASKVIHLRNIPNESGESDVIALGVPFGRVTNVLVLKGKNQAFIEMADEMAATSMVSCYT 90
Query: 88 TNVLVLKGK 96
N ++G+
Sbjct: 91 VNPPQMRGR 99
>gi|195391604|ref|XP_002054450.1| GJ22800 [Drosophila virilis]
gi|194152536|gb|EDW67970.1| GJ22800 [Drosophila virilis]
Length = 818
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE E++++ LGIPFGRVTNVLVLKGKNQ + + EI
Sbjct: 275 KASKVIHLRNIPNESGESDVVALGIPFGRVTNVLVLKGKNQAFIEMADEI 324
>gi|291227384|ref|XP_002733659.1| PREDICTED: polypyrimidine tract-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 558
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
KLD KS+ K SRV+HIRN+ + TE+EII LG+PFGRVTN+L+LKGK+Q L +E E
Sbjct: 58 KLDT-KSNGKASRVVHIRNVVADATESEIIALGVPFGRVTNILLLKGKSQAFLEMENE 114
>gi|348510807|ref|XP_003442936.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 575
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R +PN++ EAE+I LG+PFG+VTN+L+LKGKNQ L L +E
Sbjct: 70 PSRVVHVRKLPNDINEAEVIGLGLPFGKVTNLLMLKGKNQAFLELNSE 117
>gi|61403202|gb|AAH91854.1| Ptbp1b protein [Danio rerio]
Length = 586
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +PN++ EAE+I LG+PFG+VTN+L+LKGKNQ L + +E
Sbjct: 91 PSRVIHVRKLPNDINEAEVIALGLPFGKVTNLLMLKGKNQAFLEMNSE 138
>gi|169790993|ref|NP_001116126.1| polypyrimidine tract binding protein-like [Danio rerio]
Length = 564
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +PN++ EAE+I LG+PFG+VTN+L+LKGKNQ L + +E
Sbjct: 69 PSRVIHVRKLPNDINEAEVIALGLPFGKVTNLLMLKGKNQAFLEMNSE 116
>gi|194904631|ref|XP_001981034.1| GG11844 [Drosophila erecta]
gi|190655672|gb|EDV52904.1| GG11844 [Drosophila erecta]
Length = 800
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 40/50 (80%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE EA++I LGIPFGRVT VLVLKGKNQ + + EI
Sbjct: 260 KASKVIHLRNIPNESGEADVIALGIPFGRVTKVLVLKGKNQAFIEMADEI 309
>gi|345330029|ref|XP_003431460.1| PREDICTED: regulator of differentiation 1-like [Ornithorhynchus
anatinus]
Length = 670
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K ++ PSRV+H+R IPN+VTE E+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 45 KFKGDRTPCSPSRVLHLRKIPNDVTETEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 102
>gi|125827109|ref|XP_001335967.1| PREDICTED: regulator of differentiation 1 [Danio rerio]
Length = 522
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
Q K DR S PSRV+H+R +P EV+EAE++ LG+PFG+VTN+L+LKGKNQ + + +E
Sbjct: 17 QYKGDR--SPCAPSRVLHVRKVPIEVSEAEVVSLGVPFGKVTNLLMLKGKNQAFIEMASE 74
>gi|390458239|ref|XP_003732081.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Callithrix jacchus]
Length = 524
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFGRVTN+L+LK K Q L + +E
Sbjct: 19 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGRVTNLLMLKEKRQAFLEMASE 76
>gi|296190586|ref|XP_002743247.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Callithrix jacchus]
Length = 558
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFGRVTN+L+LK K Q L + +E
Sbjct: 53 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGRVTNLLMLKEKRQAFLEMASE 110
>gi|403266191|ref|XP_003925277.1| PREDICTED: polypyrimidine tract-binding protein 3 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K R + PSRV+H+R IP +VTEAEII LG+PFGRVTN+L+LK K Q L + +E
Sbjct: 53 KFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGRVTNLLMLKEKRQAFLEMASE 110
>gi|71896363|ref|NP_001026106.1| polypyrimidine tract-binding protein 1 [Gallus gallus]
gi|60098495|emb|CAH65078.1| hypothetical protein RCJMB04_3b17 [Gallus gallus]
Length = 526
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTEAE+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 27 PSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 74
>gi|326934420|ref|XP_003213288.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Meleagris
gallopavo]
Length = 526
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTEAE+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 27 PSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 74
>gi|281345981|gb|EFB21565.1| hypothetical protein PANDA_015565 [Ailuropoda melanoleuca]
Length = 444
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 8 KFKGDRPPCSPSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 65
>gi|16307418|gb|AAH10255.1| Polypyrimidine tract binding protein 2 [Mus musculus]
Length = 531
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LK KNQ L L E
Sbjct: 50 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKEKNQAFLELATE 104
>gi|426219707|ref|XP_004004060.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Ovis
aries]
Length = 526
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKGDRPPCSPSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 76
>gi|148699703|gb|EDL31650.1| mCG13402, isoform CRA_g [Mus musculus]
Length = 366
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|431918462|gb|ELK17686.1| Regulator of differentiation 1 [Pteropus alecto]
Length = 523
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 18 KFKGDRPPCSPSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 75
>gi|338720439|ref|XP_001490810.2| PREDICTED: regulator of differentiation 1 isoform 1 [Equus
caballus]
Length = 523
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 18 KFKGDRPPCSPSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 75
>gi|224087659|ref|XP_002196400.1| PREDICTED: polypyrimidine tract-binding protein 1 [Taeniopygia
guttata]
Length = 525
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTEAE+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 27 PSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 74
>gi|194389592|dbj|BAG61757.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LK KNQ L L E
Sbjct: 58 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKEKNQAFLELATE 112
>gi|116175255|ref|NP_001070683.1| regulator of differentiation 1 [Sus scrofa]
gi|115371761|gb|ABI96205.1| ROD1 [Sus scrofa]
Length = 523
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 16 KFKGDRPPCSPSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 73
>gi|432091564|gb|ELK24589.1| Regulator of differentiation 1 [Myotis davidii]
Length = 524
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 19 KFKGDRPPCSPSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 76
>gi|301781136|ref|XP_002925987.1| PREDICTED: regulator of differentiation 1-like [Ailuropoda
melanoleuca]
Length = 567
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 62 KFKGDRPPCSPSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 119
>gi|344251032|gb|EGW07136.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 323
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R++P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRSLPSDVTEDEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|26353062|dbj|BAC40161.1| unnamed protein product [Mus musculus]
Length = 299
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|355714176|gb|AES04919.1| polypyrimidine tract binding protein 1 [Mustela putorius furo]
Length = 353
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|198452628|ref|XP_001358876.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132005|gb|EAL28019.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
K S+VIH+RNIPNE E+++I LG+PFGRVTNVLVLKGKNQ + + E+
Sbjct: 244 KASKVIHLRNIPNESGESDVIALGVPFGRVTNVLVLKGKNQAFIEMADEM 293
>gi|354504485|ref|XP_003514305.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 322
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R++P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRSLPSDVTEDEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|417411514|gb|JAA52191.1| Putative polypyrimidine tract-binding protein, partial [Desmodus
rotundus]
Length = 541
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K DR S PSRV+H+R IP++ TEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 38 KGDRPPS--SPSRVLHLRKIPSDATEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 93
>gi|432936644|ref|XP_004082208.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oryzias
latipes]
Length = 577
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R +PN++ EAE+I LG+PFG+VTN+L+LKGKNQ L +E
Sbjct: 71 PSRVVHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEFGSE 118
>gi|148670261|gb|EDL02208.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Mus
musculus]
Length = 528
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 49 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 106
>gi|348522752|ref|XP_003448888.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 654
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P+++TEAE+I LG+PFG VTN+L+LK KNQ L + +E
Sbjct: 174 PSRVIHIRKLPSDITEAEVISLGVPFGDVTNLLMLKAKNQAFLEMNSE 221
>gi|432101132|gb|ELK29416.1| Polypyrimidine tract-binding protein 1 [Myotis davidii]
Length = 566
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 65 PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 112
>gi|13786186|ref|NP_112636.1| polypyrimidine tract-binding protein 3 [Rattus norvegicus]
gi|50401225|sp|Q9Z118.1|PTBP3_RAT RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|4514552|dbj|BAA75465.1| Rod1 [Rattus norvegicus]
Length = 523
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 18 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 75
>gi|417402720|gb|JAA48196.1| Putative polypyrimidine tract-binding protein [Desmodus rotundus]
Length = 557
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|255003709|ref|NP_659153.2| polypyrimidine tract-binding protein 3 isoform 1 [Mus musculus]
Length = 551
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 46 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 103
>gi|149037107|gb|EDL91638.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a
[Rattus norvegicus]
Length = 528
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 49 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 106
>gi|355717047|gb|AES05805.1| ROD1 regulator of differentiation 1 [Mustela putorius furo]
Length = 497
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 42/49 (85%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 2 SPSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 50
>gi|131529|sp|P17225.2|PTBP1_MOUSE RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|53553|emb|CAA36321.1| 25kDa nuclear protein [Mus musculus]
Length = 527
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|149037108|gb|EDL91639.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
gi|149037109|gb|EDL91640.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
Length = 514
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 9 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 66
>gi|351714013|gb|EHB16932.1| Polypyrimidine tract-binding protein 1, partial [Heterocephalus
glaber]
Length = 548
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 45 PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 92
>gi|444730196|gb|ELW70586.1| Regulator of differentiation 1 [Tupaia chinensis]
Length = 386
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 15 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 72
>gi|417402381|gb|JAA48040.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 531
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|47523538|ref|NP_999396.1| polypyrimidine tract-binding protein 1 [Sus scrofa]
gi|2500586|sp|Q29099.1|PTBP1_PIG RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|1122433|emb|CAA63597.1| polypyrimidine tract-binding protein [Sus scrofa]
Length = 557
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|395831594|ref|XP_003788880.1| PREDICTED: polypyrimidine tract-binding protein 1 [Otolemur
garnettii]
Length = 582
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 89 PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 136
>gi|403308155|ref|XP_003944537.1| PREDICTED: uncharacterized protein LOC101029560 [Saimiri
boliviensis boliviensis]
Length = 1167
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 292 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 339
>gi|397485367|ref|XP_003813820.1| PREDICTED: polypyrimidine tract-binding protein 1 [Pan paniscus]
Length = 783
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 406 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 453
>gi|410978917|ref|XP_003995834.1| PREDICTED: polypyrimidine tract-binding protein 3 [Felis catus]
Length = 540
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 42/48 (87%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 100 PSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 147
>gi|149034650|gb|EDL89387.1| polypyrimidine tract binding protein 1, isoform CRA_d [Rattus
norvegicus]
Length = 500
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 26 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTE 73
>gi|402765974|ref|NP_071961.2| polypyrimidine tract-binding protein 1 isoform b [Rattus
norvegicus]
gi|149034649|gb|EDL89386.1| polypyrimidine tract binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 530
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTE 103
>gi|402743987|ref|NP_001257986.1| polypyrimidine tract-binding protein 1 isoform a [Rattus
norvegicus]
gi|38197632|gb|AAH61858.1| Ptbp1 protein [Rattus norvegicus]
gi|149034647|gb|EDL89384.1| polypyrimidine tract binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 556
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTE 103
>gi|57002|emb|CAA43202.1| pyrimidine binding protein 1 [Rattus norvegicus]
Length = 530
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTE 103
>gi|410949959|ref|XP_003981684.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Felis catus]
Length = 508
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|344244560|gb|EGW00664.1| Regulator of differentiation 1 [Cricetulus griseus]
Length = 523
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 18 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 75
>gi|148699702|gb|EDL31649.1| mCG13402, isoform CRA_f [Mus musculus]
Length = 257
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 83 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 130
>gi|74194434|dbj|BAE37269.1| unnamed protein product [Mus musculus]
Length = 520
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|345777899|ref|XP_538790.3| PREDICTED: regulator of differentiation 1 [Canis lupus familiaris]
Length = 610
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 42/49 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
PSRV+H+R IP++VTEAE+I LG+PFG+VTN+L+LKGK+Q L + E+
Sbjct: 127 PSRVLHLRKIPSDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLKMNKEL 175
>gi|266862|sp|Q00438.1|PTBP1_RAT RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I; AltName: Full=Pyrimidine-binding protein;
Short=PYBP
Length = 555
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTE 103
>gi|19911240|dbj|BAB86943.1| polypirimidine tract binding protein [Mus musculus]
Length = 528
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|351710810|gb|EHB13729.1| Regulator of differentiation 1, partial [Heterocephalus glaber]
Length = 539
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 34 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 91
>gi|28849152|dbj|BAC65159.1| polypirimidine tract binding protein [Mus musculus]
Length = 554
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|42490826|gb|AAH66210.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|74178228|dbj|BAE29899.1| unnamed protein product [Mus musculus]
Length = 529
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|426229473|ref|XP_004008815.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Ovis
aries]
Length = 550
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTE 104
>gi|426229469|ref|XP_004008813.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Ovis
aries]
Length = 557
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTE 104
>gi|20809354|gb|AAH28848.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|74196849|dbj|BAE43140.1| unnamed protein product [Mus musculus]
Length = 530
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|148699701|gb|EDL31648.1| mCG13402, isoform CRA_e [Mus musculus]
Length = 454
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 72 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 119
>gi|116517303|ref|NP_032982.2| polypyrimidine tract-binding protein 1 isoform 2 [Mus musculus]
gi|26336949|dbj|BAC32158.1| unnamed protein product [Mus musculus]
gi|26342100|dbj|BAC34712.1| unnamed protein product [Mus musculus]
gi|26349809|dbj|BAC38544.1| unnamed protein product [Mus musculus]
gi|74211646|dbj|BAE29183.1| unnamed protein product [Mus musculus]
gi|74212275|dbj|BAE40295.1| unnamed protein product [Mus musculus]
gi|148699696|gb|EDL31643.1| mCG13402, isoform CRA_a [Mus musculus]
gi|148699698|gb|EDL31645.1| mCG13402, isoform CRA_a [Mus musculus]
Length = 529
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|55824722|gb|AAH86489.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|73987389|ref|XP_542215.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Canis
lupus familiaris]
Length = 557
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|148699697|gb|EDL31644.1| mCG13402, isoform CRA_b [Mus musculus]
Length = 499
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 26 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 73
>gi|116517301|ref|NP_001070831.1| polypyrimidine tract-binding protein 1 isoform 1 [Mus musculus]
gi|13938631|gb|AAH07472.1| Polypyrimidine tract binding protein 1 [Mus musculus]
gi|26328983|dbj|BAC28230.1| unnamed protein product [Mus musculus]
gi|26334239|dbj|BAC30837.1| unnamed protein product [Mus musculus]
gi|26335929|dbj|BAC31665.1| unnamed protein product [Mus musculus]
gi|26341260|dbj|BAC34292.1| unnamed protein product [Mus musculus]
gi|26353506|dbj|BAC40383.1| unnamed protein product [Mus musculus]
gi|74191391|dbj|BAE30277.1| unnamed protein product [Mus musculus]
gi|148699699|gb|EDL31646.1| mCG13402, isoform CRA_c [Mus musculus]
Length = 555
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|158454983|gb|AAI03384.1| PTBP1 protein [Bos taurus]
Length = 446
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTE 104
>gi|73987397|ref|XP_868637.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 6 [Canis
lupus familiaris]
Length = 550
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|354480918|ref|XP_003502650.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 591
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 92 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 139
>gi|395750059|ref|XP_003779055.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Pongo abelii]
Length = 782
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 282 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 329
>gi|440893263|gb|ELR46101.1| Polypyrimidine tract-binding protein 1, partial [Bos grunniens
mutus]
Length = 548
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 48 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTE 95
>gi|27806103|ref|NP_776867.1| polypyrimidine tract-binding protein 1 [Bos taurus]
gi|426229471|ref|XP_004008814.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Ovis
aries]
gi|75073578|sp|Q8WN55.1|PTBP1_BOVIN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB
gi|17298537|gb|AAL38169.1|AF445640_1 polypyrimidine-tract binding protein [Bos taurus]
gi|296485353|tpg|DAA27468.1| TPA: polypyrimidine tract-binding protein 1 [Bos taurus]
Length = 531
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTE 104
>gi|73987401|ref|XP_868641.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 8 [Canis
lupus familiaris]
Length = 531
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|348550210|ref|XP_003460925.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Cavia porcellus]
Length = 557
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|148700268|gb|EDL32215.1| mCG50057 [Mus musculus]
Length = 253
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + E
Sbjct: 67 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFTEMNTE 114
>gi|348550212|ref|XP_003460926.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Cavia porcellus]
Length = 531
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|291382801|ref|XP_002708166.1| PREDICTED: ROD1 regulator of differentiation 1-like [Oryctolagus
cuniculus]
Length = 1000
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 505 PSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 552
>gi|344243367|gb|EGV99470.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 528
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 29 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 76
>gi|301776290|ref|XP_002923578.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 526
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|355558193|gb|EHH14973.1| hypothetical protein EGK_00996, partial [Macaca mulatta]
Length = 529
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
K D PSRV+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ
Sbjct: 47 EDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQ 93
>gi|281341342|gb|EFB16926.1| hypothetical protein PANDA_012716 [Ailuropoda melanoleuca]
Length = 540
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 45 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 92
>gi|67678144|gb|AAH97557.1| VgRBP60 protein [Xenopus laevis]
Length = 472
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
SRVIH+R +P +VTEAE+I LG+PFG+VTN+L+LKGKNQ L + E
Sbjct: 61 SRVIHLRKLPGDVTEAEVISLGLPFGKVTNILMLKGKNQAFLEMSTE 107
>gi|74152131|dbj|BAE32096.1| unnamed protein product [Mus musculus]
Length = 555
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|47218405|emb|CAG12676.1| unnamed protein product [Tetraodon nigroviridis]
Length = 582
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQL 69
PSRV+HIR +PNE TE EII LG+PFG+VTN+L LKGKNQ+
Sbjct: 40 PSRVLHIRKLPNEATETEIIALGLPFGKVTNILTLKGKNQV 80
>gi|148670262|gb|EDL02209.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Mus
musculus]
Length = 590
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 95 PSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 142
>gi|397524|emb|CAA52653.1| polypyrimidine tract binding protein [Rattus norvegicus]
Length = 556
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
P+RVIH+R +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PTRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTE 103
>gi|147906715|ref|NP_001083815.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|6002571|gb|AAF00041.1|AF091370_1 hnRNP I-related RNA transport protein VgRBP60 [Xenopus laevis]
Length = 552
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
SRVIH+R +P +VTEAE+I LG+PFG+VTN+L+LKGKNQ L + E
Sbjct: 61 SRVIHLRKLPGDVTEAEVISLGLPFGKVTNILMLKGKNQAFLEMSTE 107
>gi|62087400|dbj|BAD92147.1| polypyrimidine tract-binding protein 1 isoform c variant [Homo
sapiens]
Length = 329
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 74 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 121
>gi|348556107|ref|XP_003463864.1| PREDICTED: regulator of differentiation 1-like [Cavia porcellus]
Length = 688
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 193 PSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 240
>gi|148224882|ref|NP_001080169.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|28278766|gb|AAH45068.1| Ptbp1 protein [Xenopus laevis]
Length = 547
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
SRVIH+R +P +VTEAE+I LG+PFG+VTN+L+LKGKNQ L + E
Sbjct: 55 SRVIHVRKLPGDVTEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTE 101
>gi|345323919|ref|XP_001506947.2| PREDICTED: polypyrimidine tract-binding protein 1 [Ornithorhynchus
anatinus]
Length = 707
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
SRVIH+R +P++VTEAE+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 208 SRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 254
>gi|354486792|ref|XP_003505562.1| PREDICTED: regulator of differentiation 1-like [Cricetulus griseus]
Length = 643
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 148 PSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 195
>gi|148670263|gb|EDL02210.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Mus
musculus]
Length = 556
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 61 PSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 108
>gi|58331982|ref|NP_001011140.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|54261503|gb|AAH84469.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|89272472|emb|CAJ82472.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 554
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
SRVIH+R +P +VTEAE+I LG+PFG+VTN+L+LKGKNQ L + E
Sbjct: 61 SRVIHVRKLPGDVTEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTE 107
>gi|391330010|ref|XP_003739458.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Metaseiulus
occidentalis]
Length = 588
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 40/47 (85%)
Query: 31 RVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEI 77
RV+H+RN+PN+ +++EI+ LGIPFG++TN+L L+GKNQ L +E E+
Sbjct: 107 RVVHLRNVPNDASDSEILQLGIPFGKITNILQLRGKNQAFLEMETEV 153
>gi|13879326|gb|AAH06638.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 520
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 25 PSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 72
>gi|30039680|ref|NP_835458.1| polypyrimidine tract-binding protein 3 isoform 2 [Mus musculus]
gi|50401558|sp|Q8BHD7.1|PTBP3_MOUSE RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|26329429|dbj|BAC28453.1| unnamed protein product [Mus musculus]
gi|26353590|dbj|BAC40425.1| unnamed protein product [Mus musculus]
gi|34785867|gb|AAH57641.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 523
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q L + +E
Sbjct: 28 PSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASE 75
>gi|354508326|ref|XP_003516204.1| PREDICTED: polypyrimidine tract-binding protein 1-like, partial
[Cricetulus griseus]
Length = 214
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R++P++VT+ E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRSLPSDVTDGEVISLGLPFGKVTNLLMLKGKNQPFIEMNTE 103
>gi|354507573|ref|XP_003515830.1| PREDICTED: polypyrimidine tract-binding protein 1-like, partial
[Cricetulus griseus]
Length = 217
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 41/48 (85%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIH+R++P++VTE ++I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHVRSLPSDVTEGKVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|363744882|ref|XP_424912.3| PREDICTED: regulator of differentiation 1 [Gallus gallus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R IP+ TEA++I LG+PFG+VTNVL+L+GK+Q L + +E
Sbjct: 75 PSRVLHLRQIPDNATEADVISLGLPFGKVTNVLILRGKSQAFLEMASE 122
>gi|332255809|ref|XP_003277021.1| PREDICTED: polypyrimidine tract-binding protein 1 [Nomascus
leucogenys]
Length = 505
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 27 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 74
>gi|30583817|gb|AAP36157.1| Homo sapiens polypyrimidine tract binding protein 1 [synthetic
construct]
gi|61369451|gb|AAX43339.1| polypyrimidine tract binding protein 1 [synthetic construct]
Length = 558
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|119581557|gb|EAW61153.1| polypyrimidine tract binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 527
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 27 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 74
>gi|14165466|ref|NP_114368.1| polypyrimidine tract-binding protein 1 isoform c [Homo sapiens]
gi|332850814|ref|XP_003316017.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Pan
troglodytes]
gi|131528|sp|P26599.1|PTBP1_HUMAN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=57 kDa RNA-binding protein PPTB-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|35768|emb|CAA43973.1| polypirimidine tract binding protein [Homo sapiens]
gi|35774|emb|CAA43056.1| polypyrimidine tract-binding protein (pPTB) [Homo sapiens]
gi|4096061|gb|AAC99798.1| PTB_HUMAN [Homo sapiens]
gi|13325140|gb|AAH04383.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|119581559|gb|EAW61155.1| polypyrimidine tract binding protein 1, isoform CRA_d [Homo
sapiens]
gi|261860774|dbj|BAI46909.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|410218530|gb|JAA06484.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301206|gb|JAA29203.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 531
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|4506243|ref|NP_002810.1| polypyrimidine tract-binding protein 1 isoform a [Homo sapiens]
gi|332850812|ref|XP_001172084.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Pan
troglodytes]
gi|32354|emb|CAA47386.1| nuclear ribonucleoprotein [Homo sapiens]
gi|35772|emb|CAA46444.1| polypirimidine tract binding protein [Homo sapiens]
gi|12803183|gb|AAH02397.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|15489171|gb|AAH13694.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|30582477|gb|AAP35465.1| polypyrimidine tract binding protein 1 [Homo sapiens]
gi|61359435|gb|AAX41718.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|61359442|gb|AAX41719.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|119581558|gb|EAW61154.1| polypyrimidine tract binding protein 1, isoform CRA_c [Homo
sapiens]
gi|410218528|gb|JAA06483.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301208|gb|JAA29204.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 557
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|14165464|ref|NP_114367.1| polypyrimidine tract-binding protein 1 isoform b [Homo sapiens]
gi|332850820|ref|XP_003316018.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Pan
troglodytes]
gi|35770|emb|CAA46443.1| polypirimidine tract binding protein [Homo sapiens]
gi|119581556|gb|EAW61152.1| polypyrimidine tract binding protein 1, isoform CRA_a [Homo
sapiens]
gi|410218532|gb|JAA06485.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 550
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|402903490|ref|XP_003914598.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Papio
anubis]
Length = 549
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|297275608|ref|XP_001092088.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Macaca
mulatta]
Length = 556
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|432964272|ref|XP_004086906.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 541
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P E +AE+I LG+PFG+VTN+L L+GKNQ L + E
Sbjct: 77 PSRVIHIRRLPTEAMDAEVIALGLPFGKVTNILTLRGKNQAFLEMGTE 124
>gi|297275604|ref|XP_002801040.1| PREDICTED: polypyrimidine tract-binding protein 1 [Macaca mulatta]
Length = 549
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|119581561|gb|EAW61157.1| polypyrimidine tract binding protein 1, isoform CRA_f [Homo
sapiens]
Length = 520
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 27 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 74
>gi|402903488|ref|XP_003914597.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Papio
anubis]
gi|380814966|gb|AFE79357.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
gi|384948418|gb|AFI37814.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
Length = 530
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|402903486|ref|XP_003914596.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Papio
anubis]
gi|380814964|gb|AFE79356.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
gi|384948416|gb|AFI37813.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
Length = 556
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|297275606|ref|XP_001092214.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 530
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 56 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 103
>gi|355702910|gb|EHH29401.1| hypothetical protein EGK_09820, partial [Macaca mulatta]
Length = 555
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 55 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 102
>gi|119581562|gb|EAW61158.1| polypyrimidine tract binding protein 1, isoform CRA_g [Homo
sapiens]
Length = 501
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 27 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 74
>gi|426386368|ref|XP_004059657.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 533
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|426386370|ref|XP_004059658.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 552
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|426386366|ref|XP_004059656.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 559
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>gi|156392443|ref|XP_001636058.1| predicted protein [Nematostella vectensis]
gi|156223157|gb|EDO43995.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PS+V+H+RN+ E T+AEII LGIP+GRVTNVL+LKGKNQ L ++ +
Sbjct: 1 PSKVLHLRNVAAEATDAEIIALGIPYGRVTNVLMLKGKNQAFLEMKTK 48
>gi|253722484|pdb|2AD9|A Chain A, Solution Structure Of Polypyrimidine Tract Binding
Protein Rbd1 Complexed With Cucucu Rna
Length = 119
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 30 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 77
>gi|55669743|pdb|1SJQ|A Chain A, Nmr Structure Of Rrm1 From Human Polypyrimidine Tract
Binding Protein Isoform 1 (Ptb1)
Length = 105
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P +VTE E+I LG+PFG+VTN+L+LKGKNQ + + E
Sbjct: 15 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 62
>gi|431922192|gb|ELK19283.1| Polypyrimidine tract-binding protein 1 [Pteropus alecto]
Length = 566
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P+++TE E+I LG+PFG+VTN+L+LKGK+Q + + E
Sbjct: 63 PSRVIHIRKLPSDITEGEVISLGLPFGKVTNLLMLKGKSQAFIEMNTE 110
>gi|224089408|ref|XP_002188238.1| PREDICTED: polypyrimidine tract-binding protein 3 [Taeniopygia
guttata]
Length = 488
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
PSRV+HIR IPNEVT AE++ LG+PFG+VTN+L+L+GK Q L + +
Sbjct: 23 SPSRVLHIRQIPNEVTGAEVVSLGLPFGKVTNLLMLRGKGQAFLEMAS 70
>gi|405953685|gb|EKC21299.1| Regulator of differentiation 1 [Crassostrea gigas]
Length = 764
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 13 VMVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLH 72
V V+Q KL+ Q S PSRV+HIR++P + TEA+++ LG+P+G+++NVL+LK KNQ L
Sbjct: 264 VSVLQVKLE-QNSPNGPSRVVHIRSLPPDCTEADVVQLGMPYGKMSNVLLLKQKNQAFLE 322
Query: 73 LEAE 76
E
Sbjct: 323 FLDE 326
>gi|198434992|ref|XP_002131695.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 1 [Ciona intestinalis]
Length = 528
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ DR SD + S+VIHIR++P++V+E E+I LG+ FG+VTN+L+LKGKNQ L +E
Sbjct: 33 RTDRINSD-QVSKVIHIRSLPSDVSEQEVIQLGLSFGKVTNLLMLKGKNQAFLEME 87
>gi|395824362|ref|XP_003785435.1| PREDICTED: polypyrimidine tract-binding protein 3 [Otolemur
garnettii]
Length = 534
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
K + PSRV+H+R IP +VTEAE+I LG+PFG+VTN+L+LKGK+Q
Sbjct: 38 KFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQ 87
>gi|198434994|ref|XP_002131704.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 2 [Ciona intestinalis]
Length = 495
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ DR SD + S+VIHIR++P++V+E E+I LG+ FG+VTN+L+LKGKNQ L +E
Sbjct: 33 RTDRINSD-QVSKVIHIRSLPSDVSEQEVIQLGLSFGKVTNLLMLKGKNQAFLEME 87
>gi|351706875|gb|EHB09794.1| Polypyrimidine tract-binding protein 1 [Heterocephalus glaber]
Length = 543
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHIR +P++VTE E+I L +PFG+VTN+L++KGKNQ + + E
Sbjct: 57 PSRVIHIRKLPSDVTEGEVISLVLPFGKVTNLLMVKGKNQAFIEMNTE 104
>gi|410928343|ref|XP_003977560.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Takifugu
rubripes]
Length = 534
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PS+V+HIR +P+++TE E+I LG+PFG V+N+L+LK KNQ L + E
Sbjct: 48 PSKVVHIRKLPDDITETEVISLGLPFGNVSNLLMLKTKNQAFLEMNCE 95
>gi|196010463|ref|XP_002115096.1| hypothetical protein TRIADDRAFT_28601 [Trichoplax adhaerens]
gi|190582479|gb|EDV22552.1| hypothetical protein TRIADDRAFT_28601, partial [Trichoplax
adhaerens]
Length = 476
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
SRVIHIRNIP + ++ EI LG+PFG+VTN+L L KNQ L LE E
Sbjct: 1 SRVIHIRNIPTDSSDVEIAALGVPFGKVTNILRLNAKNQCFLELEDE 47
>gi|390332437|ref|XP_003723500.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 649
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K+ R+ S PSRV+HIRN+ NE +A+++ L +P GRVT L+LKGKNQ L + E
Sbjct: 52 KVKRENSASSPSRVVHIRNLANEALDADVLSLALPIGRVTKYLMLKGKNQAFLEMADE 109
>gi|390332444|ref|XP_003723502.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 5
[Strongylocentrotus purpuratus]
Length = 555
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K+ R+ S PSRV+HIRN+ NE +A+++ L +P GRVT L+LKGKNQ L + E
Sbjct: 71 KVKRENSASSPSRVVHIRNLANEALDADVLSLALPIGRVTKYLMLKGKNQAFLEMADE 128
>gi|390332435|ref|XP_003723499.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 631
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K+ R+ S PSRV+HIRN+ NE +A+++ L +P GRVT L+LKGKNQ L + E
Sbjct: 34 KVKRENSASSPSRVVHIRNLANEALDADVLSLALPIGRVTKYLMLKGKNQAFLEMADE 91
>gi|213513392|ref|NP_001133760.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
gi|209155238|gb|ACI33851.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 24 KSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
+S PSRVIH+R +P ++ ++E+I +G+PFG+VTN+L++KGKNQ L +
Sbjct: 56 RSPSAPSRVIHLRQLPGDIQDSEVISMGMPFGKVTNLLMMKGKNQAFLEM 105
>gi|223647470|gb|ACN10493.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 24 KSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
+S PSRVIH+R +P ++ ++E+I +G+PFG+VTN+L++KGKNQ L +
Sbjct: 56 RSPSAPSRVIHLRQLPGDIQDSEVISMGMPFGKVTNLLMMKGKNQAFLEM 105
>gi|85003003|gb|ABC68595.1| polypyrimidine tract binding protein [Paracentrotus lividus]
Length = 618
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K+ R+ S PSRV+HIRN+ NE +A+++ L +P GRVT L+LKGKNQ L + E
Sbjct: 97 KVKRENSASSPSRVVHIRNLANEALDADVLSLALPIGRVTKYLMLKGKNQAFLEMADE 154
>gi|115634663|ref|XP_001176080.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 617
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K+ R+ S PSRV+HIRN+ NE +A+++ L +P GRVT L+LKGKNQ L + E
Sbjct: 99 KVKRENSASSPSRVVHIRNLANEALDADVLSLALPIGRVTKYLMLKGKNQAFLEMADE 156
>gi|390332446|ref|XP_003723503.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 6
[Strongylocentrotus purpuratus]
Length = 603
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K+ R+ S PSRV+HIRN+ NE +A+++ L +P GRVT L+LKGKNQ L + E
Sbjct: 40 KVKRENSASSPSRVVHIRNLANEALDADVLSLALPIGRVTKYLMLKGKNQAFLEMADE 97
>gi|390332442|ref|XP_003723501.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 4
[Strongylocentrotus purpuratus]
Length = 662
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K+ R+ S PSRV+HIRN+ NE +A+++ L +P GRVT L+LKGKNQ L + E
Sbjct: 99 KVKRENSASSPSRVVHIRNLANEALDADVLSLALPIGRVTKYLMLKGKNQAFLEMADE 156
>gi|395745998|ref|XP_003778369.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pongo abelii]
Length = 551
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
K DR+ + PSRV HI+ +P +VTE E+I L +PFG VTN+L+LKGKNQ + L E
Sbjct: 48 KGDRRSAGV-PSRVTHIQKLPXDVTEGEVISLELPFGNVTNLLMLKGKNQAFIELRTE 104
>gi|392341647|ref|XP_003754390.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
gi|392349693|ref|XP_003750446.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
Length = 558
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSR IH+ +P++VTE E+I LG+PFG+VTN+L+LKGKNQ + E
Sbjct: 55 PSRDIHVCKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFTEMNTE 102
>gi|354498135|ref|XP_003511171.1| PREDICTED: polypyrimidine tract-binding protein 1-like
[Cricetulus griseus]
gi|344255182|gb|EGW11286.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 575
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PS+VIHI +PN VTE E++ L +PFG+V+N+++LKGKNQ L+ + E
Sbjct: 27 PSKVIHIHRMPNSVTEREVLCLALPFGKVSNLMLLKGKNQALMEMSTE 74
>gi|390332439|ref|XP_780392.3| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 7
[Strongylocentrotus purpuratus]
Length = 659
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
R+ S PSRV+HIRN+ NE +A+++ L +P GRVT L+LKGKNQ L + E
Sbjct: 65 RENSASSPSRVVHIRNLANEALDADVLSLALPIGRVTKYLMLKGKNQAFLEMADE 119
>gi|198435860|ref|XP_002127727.1| PREDICTED: similar to polypyrimidine tract binding protein 1
[Ciona intestinalis]
Length = 516
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEII 78
S+V+H+R++P +VT+ E+I LG+ +G VTNVL+LKGKNQ L +E E I
Sbjct: 41 SKVVHLRSLPGDVTDNEVIQLGLSYGHVTNVLMLKGKNQAFLEMEDEEI 89
>gi|221126625|ref|XP_002156158.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Hydra
magnipapillata]
Length = 494
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 22 RQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ K D PS+VIHIR IP + TE EI LG+PFG VTN+L+++ K+Q L L+
Sbjct: 23 KSKQDQTPSKVIHIRQIPMDATEPEIKSLGLPFGEVTNMLLMRSKSQAFLELQ 75
>gi|195144760|ref|XP_002013364.1| GL24102 [Drosophila persimilis]
gi|194102307|gb|EDW24350.1| GL24102 [Drosophila persimilis]
Length = 494
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGK 66
K S+VIH+RNIPNE E+++I LG+PFGRVTNVLVL G+
Sbjct: 87 KASKVIHLRNIPNESGESDVIALGVPFGRVTNVLVLNGQ 125
>gi|324528885|gb|ADY48963.1| Polypyrimidine tract-binding protein 1 [Ascaris suum]
Length = 122
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 38/49 (77%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+PS+ +H+RNIP+++TE E++H +P+G++ N L+LKGKNQ + E E
Sbjct: 14 RPSKGVHLRNIPSDMTELELLHFCMPYGKLVNYLMLKGKNQAFVEYEEE 62
>gi|148701925|gb|EDL33872.1| mCG9934 [Mus musculus]
Length = 559
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRVIHI ++P VTE+EI+ L +PFG+V+N+L LK KNQ + + E
Sbjct: 27 PSRVIHIHSLPTSVTESEILCLALPFGKVSNLLFLKAKNQAFMEMSTE 74
>gi|312107424|ref|XP_003150915.1| hypothetical protein LOAG_15376 [Loa loa]
gi|307753920|gb|EFO13154.1| hypothetical protein LOAG_15376, partial [Loa loa]
Length = 121
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
SRV+H+RNIP+++T+ E++H +P+G++ N L+LKG+NQ + E E
Sbjct: 20 SRVVHLRNIPSDMTDLELVHFCMPYGKLVNYLLLKGRNQAFVEYEDE 66
>gi|402586462|gb|EJW80400.1| hypothetical protein WUBG_08691, partial [Wuchereria bancrofti]
Length = 229
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
SRV+H+RNIP+++T+ E+IH +P+G++ N L+L+G+NQ + E E
Sbjct: 128 SRVVHLRNIPSDMTDLELIHFCMPYGKLINYLLLRGRNQAFVEYEDE 174
>gi|47209150|emb|CAF89890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 569
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R +P ++TE E++ L +PFGRV+ ++ LK KNQ L + +E
Sbjct: 6 PSRVLHLRQLPFDITEQEVLALALPFGRVSKLITLKAKNQGFLEMASE 53
>gi|449267533|gb|EMC78469.1| Regulator of differentiation 1, partial [Columba livia]
Length = 499
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/42 (57%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 27 FKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
+ PSRV+H+R+IP++ TE E++ L +PFG+VTN+L+LKGK Q
Sbjct: 11 YSPSRVLHLRHIPSDATE-EVLSLALPFGKVTNILMLKGKRQ 51
>gi|355714182|gb|AES04921.1| polypyrimidine tract binding protein 2 [Mustela putorius furo]
Length = 121
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 5/49 (10%)
Query: 33 IHIRNIPNEVTE-----AEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+HIR +P EVTE E+I LG+PFG+VTN+L+LKGKNQ L L E
Sbjct: 1 LHIRKLPGEVTEGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATE 49
>gi|348505292|ref|XP_003440195.1| PREDICTED: regulator of differentiation 1 [Oreochromis niloticus]
Length = 514
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R +P +V+E E++ L +PFGRV+ ++ LK KNQ L + +E
Sbjct: 40 PSRVLHLRQLPPDVSEQEVLSLALPFGRVSKLITLKTKNQAFLEMASE 87
>gi|410904361|ref|XP_003965660.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Takifugu
rubripes]
Length = 481
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV+H+R +P +TE E++ L +PFGRV+ ++ LK KNQ L + +E
Sbjct: 25 PSRVLHLRQLPFNITEQEVLALALPFGRVSKLITLKAKNQGFLEMASE 72
>gi|397507212|ref|XP_003824099.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pan paniscus]
Length = 541
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSRV HI+ P +V E E+I L +PFG+V N+L+LKGKNQ + + E
Sbjct: 57 PSRVTHIQKXPIDVIEGEVISLELPFGKVINLLMLKGKNQAFIKMSTE 104
>gi|443711043|gb|ELU04990.1| hypothetical protein CAPTEDRAFT_200421 [Capitella teleta]
Length = 524
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
KPS+V+H R +P + TE E++ LG+PFG +TN+++ K KNQ L +
Sbjct: 30 KPSKVLHFRGVPADATEGEVVQLGLPFGHMTNLVLAKKKNQAWLEM 75
>gi|256077460|ref|XP_002575022.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360043943|emb|CCD81489.1| putative polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 597
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA-EIIHLGIPFGRV 87
PS+V+HIRN+P++ TE EI LGIPFG + N+++ K NQ LL ++ E + + + R
Sbjct: 28 PSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQCLESAIMMVSYYRE 87
Query: 88 TNVLVLKGKNQVSLISGYR 106
V L+G+N V S ++
Sbjct: 88 YQV-TLRGRNLVMQYSKHQ 105
>gi|440804444|gb|ELR25321.1| hnRNPL/PTB/hephaestus splicing factor subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 575
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 17 QAKLDRQKSD--FKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
Q+ + KSD PS V+H+RN+P + TE E++ + PFGRV VL+LKGK Q + ++
Sbjct: 102 QSLRKKPKSDPPSGPSSVLHVRNLPMDCTEQELVTIACPFGRVEKVLLLKGKTQGFVQMQ 161
>gi|33414511|ref|NP_877970.1| polypyrimidine tract-binding protein [Rattus norvegicus]
gi|29824910|gb|AAO92353.1| SMPTB [Rattus norvegicus]
gi|149028489|gb|EDL83874.1| polypyrimidine tract-binding protein [Rattus norvegicus]
Length = 588
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PSR++HI +P+ VTE EI+ L +PFG V+N+L L+ KNQ + + E
Sbjct: 27 PSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTE 74
>gi|281210224|gb|EFA84392.1| RNA-binding region RNP-1 domain-containing protein
[Polysphondylium pallidum PN500]
Length = 468
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 17 QAKLDRQKS-DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
Q+K +QK+ PS+V+H+RN+P + TE EI+ L PFG+V ++L+LKGK+Q + +
Sbjct: 34 QSKSKKQKNYTPTPSKVVHLRNLPIDCTEHEIMALASPFGQVEHILILKGKSQGFIQM 91
>gi|76157758|gb|AAX28586.2| SJCHGC05650 protein [Schistosoma japonicum]
Length = 381
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
PS+V+HIRN+P++ TE EI LGIPFG + N+++ K NQ LL ++
Sbjct: 54 PSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQC 100
>gi|226468146|emb|CAX76300.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
PS+V+HIRN+P++ TE EI LGIPFG + N+++ K NQ LL ++
Sbjct: 54 PSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQC 100
>gi|226472642|emb|CAX71007.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
PS+V+HIRN+P++ TE EI LGIPFG + N+++ K NQ LL ++
Sbjct: 54 PSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQC 100
>gi|226468148|emb|CAX76301.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 610
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
PS+V+HIRN+P++ TE EI LGIPFG + N+++ K NQ LL ++
Sbjct: 42 PSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQC 88
>gi|226472640|emb|CAX71006.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 596
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
PS+V+HIRN+P++ TE EI LGIPFG + N+++ K NQ LL ++
Sbjct: 28 PSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQC 74
>gi|226468144|emb|CAX76299.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 436
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
PS+V+HIRN+P++ TE EI LGIPFG + N+++ K NQ LL ++
Sbjct: 42 PSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQC 88
>gi|328867981|gb|EGG16362.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 656
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 34/41 (82%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
+PS+VIH+RN+P + TE EI+ + PFG+V ++L+LKGK+Q
Sbjct: 246 QPSKVIHLRNLPIDCTEHEIMAIAAPFGQVDHILILKGKSQ 286
>gi|413933765|gb|AFW68316.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945517|gb|AFW78166.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 128
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ LL +E
Sbjct: 3 EPSKVIHIRNVGHEIAESDLLQLLQPFGVVSKIVMLRAKNQTLLQME 49
>gi|330840158|ref|XP_003292087.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
gi|325077693|gb|EGC31389.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
Length = 748
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
PS+V+H+RN+P + TE EII L PFG + N++++KGK+Q L+ +
Sbjct: 173 PSKVVHLRNLPPDCTEQEIISLIEPFGAIENMIIIKGKSQALVQM 217
>gi|115464105|ref|NP_001055652.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|113579203|dbj|BAF17566.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|215734982|dbj|BAG95704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196864|gb|EEC79291.1| hypothetical protein OsI_20097 [Oryza sativa Indica Group]
gi|222631716|gb|EEE63848.1| hypothetical protein OsJ_18672 [Oryza sativa Japonica Group]
Length = 444
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ EA+++ L PFG V+ +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHIRNVGHEIAEADLLQLLQPFGNVSKIVMLRAKNQALLQMQ 49
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLK--GKNQLLLHLEAE 76
P+++IHI +P E+TE I++ G V N + + GK Q L+ E+E
Sbjct: 365 PTKMIHISALPQEITEDAILNHVSEHGSVVNTKLFEVNGKRQALIQFESE 414
>gi|413949172|gb|AFW81821.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 339
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ LL +E
Sbjct: 88 EPSKVIHIRNVGHEIAESDLLQLLQPFGMVSKIVMLRAKNQALLQME 134
>gi|358332176|dbj|GAA36554.2| polypyrimidine tract-binding protein 1 [Clonorchis sinensis]
Length = 543
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PSRVIH+RN+P++V E EI L IPFG + N+++ K NQ L+ +E
Sbjct: 8 PSRVIHVRNMPSDVNENEIALLAIPFGLIKNMVLSKKNNQALIEME 53
>gi|413949171|gb|AFW81820.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 529
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ LL +E
Sbjct: 88 EPSKVIHIRNVGHEIAESDLLQLLQPFGMVSKIVMLRAKNQALLQME 134
>gi|293335567|ref|NP_001169470.1| uncharacterized protein LOC100383343 [Zea mays]
gi|224029557|gb|ACN33854.1| unknown [Zea mays]
Length = 444
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ LL +E
Sbjct: 3 EPSKVIHIRNVGHEIAESDLLQLLQPFGMVSKIVMLRAKNQALLQME 49
>gi|413933763|gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 445
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ LL +E
Sbjct: 3 EPSKVIHIRNVGHEIAESDLLQLLQPFGVVSKIVMLRAKNQTLLQME 49
>gi|413933764|gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945515|gb|AFW78164.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ LL +E
Sbjct: 3 EPSKVIHIRNVGHEIAESDLLQLLQPFGVVSKIVMLRAKNQTLLQME 49
>gi|413945516|gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ LL +E
Sbjct: 3 EPSKVIHIRNVGHEIAESDLLQLLQPFGVVSKIVMLRAKNQTLLQME 49
>gi|413933762|gb|AFW68313.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 251
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGI 82
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ L+ E IH +
Sbjct: 3 EPSKVIHIRNVGHEIAESDLLQLLQPFGVVSKIVMLRAKNQAQTLLQMEDIHASV 57
>gi|357126039|ref|XP_003564696.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 443
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 36/46 (78%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PSRVIHIRN+ +E++E++++ + PFG V +++L+ KNQ L+ +E
Sbjct: 4 PSRVIHIRNVGHEISESDLLQVVQPFGTVAKLVMLRAKNQALVQME 49
>gi|242090663|ref|XP_002441164.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
gi|241946449|gb|EES19594.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
Length = 444
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E+ E++++ L PFG V+ +++L+ KNQ LL +E
Sbjct: 3 EPSKVIHIRNVGHEIAESDLLQLLQPFGVVSKIVMLRAKNQALLQME 49
>gi|66809907|ref|XP_638677.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467316|gb|EAL65349.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 892
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 35/45 (77%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
PS+VIH+RN+P++ T+ EI + PFG + N++++KGKNQ L+ +
Sbjct: 311 PSKVIHLRNLPSDCTDQEIKSMVEPFGVIENLIIIKGKNQALVQM 355
>gi|256076159|ref|XP_002574381.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 639
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLL--LHLE 74
++++DR ++ PSRVIHIRN+P + TE EI IPFG + N+++ K NQ L +H+
Sbjct: 78 KSRVDRLEA--SPSRVIHIRNMPGDATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVL 135
Query: 75 AEIIHL 80
E + L
Sbjct: 136 EEAVQL 141
>gi|256076161|ref|XP_002574382.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 463
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLL--LHLE 74
++++DR ++ PSRVIHIRN+P + TE EI IPFG + N+++ K NQ L +H+
Sbjct: 78 KSRVDRLEA--SPSRVIHIRNMPGDATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVL 135
Query: 75 AEIIHL 80
E + L
Sbjct: 136 EEAVQL 141
>gi|350644875|emb|CCD60411.1| polypyrimidine tract binding protein, putative [Schistosoma
mansoni]
Length = 592
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLL--LHLE 74
++++DR ++ PSRVIHIRN+P + TE EI IPFG + N+++ K NQ L +H+
Sbjct: 42 KSRVDRLEA--SPSRVIHIRNMPGDATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVL 99
Query: 75 AEIIHL 80
E + L
Sbjct: 100 EEAVQL 105
>gi|350644874|emb|CCD60410.1| polypyrimidine tract binding protein, putative [Schistosoma
mansoni]
Length = 427
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLL--LHLE 74
++++DR ++ PSRVIHIRN+P + TE EI IPFG + N+++ K NQ L +H+
Sbjct: 42 KSRVDRLEA--SPSRVIHIRNMPGDATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVL 99
Query: 75 AEIIHL 80
E + L
Sbjct: 100 EEAVQL 105
>gi|222619594|gb|EEE55726.1| hypothetical protein OsJ_04208 [Oryza sativa Japonica Group]
Length = 309
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E++E+E++ + PFG V +++L+ KNQ L+ +E
Sbjct: 3 EPSKVIHIRNVGHEISESELLQVVQPFGTVAKLVMLRAKNQALVQME 49
>gi|327267525|ref|XP_003218551.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
20-like [Anolis carolinensis]
Length = 1193
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 29 PSRVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
P RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 492 PGRVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 537
>gi|218189437|gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indica Group]
Length = 443
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIHIRN+ +E++E+E++ + PFG V +++L+ KNQ L+ +E
Sbjct: 3 EPSKVIHIRNVGHEISESELLQVVQPFGTVAKLVMLRAKNQALVQME 49
>gi|300681488|emb|CBH32582.1| RNA recognition domain containing protein,expressed [Triticum
aestivum]
Length = 439
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PSRVIHIRN+ +E++E +++ + PFG V +++L+ KNQ L+ +E
Sbjct: 3 EPSRVIHIRNVGHEISETDLLQVVQPFGAVAKLVMLRTKNQALVQME 49
>gi|226487296|emb|CAX75513.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 571
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
++++DR ++ PSRVIHIRN+P + TE EI IPFG + N+++ K NQ L+ +
Sbjct: 10 KSRVDRLEA--SPSRVIHIRNMPADATENEIALFAIPFGLLKNMVLSKRNNQALIEM 64
>gi|296082547|emb|CBI21552.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ E++E +++ L PFG VT +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQ 49
>gi|226487300|emb|CAX75515.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
gi|226487302|emb|CAX75516.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 603
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
++++DR ++ PSRVIHIRN+P + TE EI IPFG + N+++ K NQ L+ +
Sbjct: 42 KSRVDRLEA--SPSRVIHIRNMPADATENEIALFAIPFGLLKNMVLSKRNNQALIEM 96
>gi|268532214|ref|XP_002631235.1| C. briggsae CBR-PTB-1 protein [Caenorhabditis briggsae]
Length = 610
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIPFGRVTN 89
SRV+H+RNIP ++ + E++ L I +G V+N ++LKGK+Q + E E G
Sbjct: 116 SRVVHVRNIPPDLVDVELMQLCIQYGPVSNYMMLKGKSQAFVEYEEETSAAAFVTGMTAV 175
Query: 90 VLVLKGKNQVSLISGYR 106
+ ++G+ + S +R
Sbjct: 176 PIQIRGRTLFAQYSTHR 192
>gi|226487298|emb|CAX75514.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 197
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
++++DR ++ PSRVIHIRN+P + TE EI IPFG + N+++ K NQ L+ +
Sbjct: 42 KSRVDRLEA--SPSRVIHIRNMPADATENEIALFAIPFGLLKNMVLSKRNNQALIEMH 97
>gi|300681487|emb|CBH32581.1| RNA recognition domain containing protein [Triticum aestivum]
Length = 277
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PSRVIHIRN+ +E++E +++ + PFG V +++L+ KNQ L+ +E
Sbjct: 3 EPSRVIHIRNVGHEISETDLLQVVQPFGAVAKLVMLRTKNQALVQME 49
>gi|356559629|ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|76155644|gb|AAX26933.2| SJCHGC05534 protein [Schistosoma japonicum]
Length = 219
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
++++DR ++ PSRVIHIRN+P + TE EI IPFG + N+++ K NQ L+ +
Sbjct: 39 KSRVDRLEA--SPSRVIHIRNMPADATENEIALFAIPFGLLKNMVLSKRNNQALIEMH 94
>gi|255566638|ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223536394|gb|EEF38043.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 437
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|348525068|ref|XP_003450044.1| PREDICTED: probable RNA-binding protein 20-like [Oreochromis
niloticus]
Length = 1094
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE-AEIIHLGIPFGRVT 88
RV+HI N+P TE ++I+LGIPFG+VTN ++++ +Q L + E H + + ++T
Sbjct: 465 RVVHICNLPEGSCTETDVINLGIPFGKVTNYILMRSTHQAFLEMAYVEAAHAMVQYYQLT 524
Query: 89 NVLVLKGKNQVSLISGYRNRQ 109
++ K + + Y+ Q
Sbjct: 525 PAMINNQKLLIRMSKRYKELQ 545
>gi|356499519|ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN--VLVLKGKNQLLLHLEAE 76
P+++IH+ +P ++TE EI+ L G + N V + GK Q L+ E E
Sbjct: 359 SPTKMIHLSTLPQDITEEEIVSLLEEHGTIVNSKVFEMNGKKQALVQFETE 409
>gi|359493141|ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform
1 [Vitis vinifera]
Length = 445
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|359493143|ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform
2 [Vitis vinifera]
Length = 432
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|296081200|emb|CBI18226.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|224082480|ref|XP_002306709.1| predicted protein [Populus trichocarpa]
gi|222856158|gb|EEE93705.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|226489711|emb|CAX75006.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 351
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 17 QAKLDRQKSDFKP-SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
+A+LD S+ P SRV+H+R +P +V+E+E+ L IPFG + N+++ + Q L+ ++
Sbjct: 28 KARLDSTSSNAMPESRVLHLRGLPPDVSESEVAMLAIPFGSIANMILTRKSCQALVEMDT 87
>gi|294461640|gb|ADE76380.1| unknown [Picea sitchensis]
Length = 511
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG++ N V G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKIVNTKVNVGSNR 55
>gi|76157413|gb|AAX28348.2| SJCHGC04555 protein [Schistosoma japonicum]
Length = 304
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 17 QAKLDRQKSDFKP-SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
+A+LD S+ P SRV+H+R +P +V+E+E+ L IPFG + N+++ + Q L+ ++
Sbjct: 28 KARLDSTSSNAMPESRVLHLRGLPPDVSESEVAMLAIPFGSIANMILTRKSCQALVEMDT 87
>gi|440793956|gb|ELR15127.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 515
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
PS+V+H RN+ +E+T+ +I+ L PFG V V++L KNQ LL
Sbjct: 163 PSKVLHFRNVTSELTQEDIMELAAPFGTVEKVVMLTSKNQALLEF 207
>gi|224066621|ref|XP_002302167.1| predicted protein [Populus trichocarpa]
gi|222843893|gb|EEE81440.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|294909465|ref|XP_002777772.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239885734|gb|EER09567.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 632
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+PS+V+++RN+P VTE +II + FGRV N+L+L+ K + E E
Sbjct: 56 QPSKVLYVRNVPESVTEQDIIAYCLTFGRVVNILLLRDKRHGFIEFEDE 104
>gi|334702289|gb|AEG89704.1| polypyrimidine tract-binding protein 6 [Solanum tuberosum]
Length = 444
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGQEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|226470156|emb|CAX70359.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 415
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 17 QAKLDRQKSDFKP-SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+A+LD S+ P SRV+H+R +P +V+E+E+ L IPFG + N+++ + Q L+ ++
Sbjct: 28 KARLDSTSSNAMPESRVLHLRGLPPDVSESEVAMLAIPFGSIANMILTRKSCQALVEMD 86
>gi|226489713|emb|CAX75007.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 583
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 17 QAKLDRQKSDFKP-SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+A+LD S+ P SRV+H+R +P +V+E+E+ L IPFG + N+++ + Q L+ ++
Sbjct: 28 KARLDSTSSNAMPESRVLHLRGLPPDVSESEVAMLAIPFGSIANMILTRKSCQALVEMD 86
>gi|294463038|gb|ADE77057.1| unknown [Picea sitchensis]
Length = 528
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG++ N V G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKIINTKVNVGANR 55
>gi|339254280|ref|XP_003372363.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316967235|gb|EFV51692.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 284
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
SRV+H+RN+P+ +TE E++ I +G++ VL+LKGKNQ L
Sbjct: 104 SRVVHLRNLPSNLTEVELVQHFISYGKIEKVLLLKGKNQGFLQF 147
>gi|357133525|ref|XP_003568375.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 444
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ S+VIHIRN+ +E+ EA+++ L PFG V+ +++L+ KNQ LL ++
Sbjct: 3 EASKVIHIRNVGHEIAEADLLQLLQPFGAVSKIVMLRAKNQALLQMQ 49
>gi|226470154|emb|CAX70358.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 474
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 17 QAKLDRQKSDFKP-SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+A+LD S+ P SRV+H+R +P +V+E+E+ L IPFG + N+++ + Q L+ ++
Sbjct: 28 KARLDSTSSNAMPESRVLHLRGLPPDVSESEVAMLAIPFGSIANMILTRKSCQALVEMD 86
>gi|302782650|ref|XP_002973098.1| hypothetical protein SELMODRAFT_173175 [Selaginella
moellendorffii]
gi|302790002|ref|XP_002976769.1| hypothetical protein SELMODRAFT_105564 [Selaginella
moellendorffii]
gi|300155807|gb|EFJ22438.1| hypothetical protein SELMODRAFT_105564 [Selaginella
moellendorffii]
gi|300158851|gb|EFJ25472.1| hypothetical protein SELMODRAFT_173175 [Selaginella
moellendorffii]
Length = 436
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+V+H+RN+ E+TE++++ L PFG V+ +++L+ KNQ LL ++
Sbjct: 3 EPSKVLHVRNVGQEITESDLLGLVQPFGSVSKMVLLRTKNQALLQMQ 49
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 20 LDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLK--GKNQLLLHLEAE 76
L K P+++IH+ ++P ++TE ++++ P G + NV + + GK Q L+H + E
Sbjct: 348 LKNYKYCCSPTKMIHVSSLPTDITEVDLMNHLSPHGNILNVKIFEANGKKQALVHFDNE 406
>gi|449503770|ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ L+ ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALMQMQ 49
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN--VLVLKGKNQLLLHLEAEIIHLGIPFG 85
P+++IHI ++ EVTE EI+ L G + N + + GK Q L+ + E
Sbjct: 352 SPTKMIHISSLSQEVTEEEIVSLLEEHGPIVNSKLFEMNGKKQALIMFDTE--------E 403
Query: 86 RVTNVLVLKGKNQVSLISG 104
+ T LV K SL+SG
Sbjct: 404 QATEALVCK---HASLLSG 419
>gi|395502142|ref|XP_003755444.1| PREDICTED: probable RNA-binding protein 20 [Sarcophilus harrisii]
Length = 1186
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 2 KDIGGNVKYTLVMVVQAKLDRQKSDFKPS--------------RVIHIRNIPN-EVTEAE 46
+D N+ + +V + F P+ RV+HI N+P TE +
Sbjct: 436 EDFASNIGSSFAVVPTRSFAQSNPTFSPTASGTNFSQRKSTAGRVVHICNLPEGSCTEND 495
Query: 47 IIHLGIPFGRVTNVLVLKGKNQLLLHL 73
+I+LG+PFG+VTN +++K NQ L +
Sbjct: 496 VINLGLPFGKVTNYILMKSTNQAFLEM 522
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 493 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 530
>gi|334314078|ref|XP_003339987.1| PREDICTED: probable RNA-binding protein 20 [Monodelphis domestica]
Length = 1252
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 2 KDIGGNVKYTLVMVVQAKLDRQKSDFKPS--------------RVIHIRNIPN-EVTEAE 46
+D N+ + +V + F P+ RV+HI N+P TE +
Sbjct: 479 EDFASNIGSSFAVVPTRSFAQSNPTFSPTASGTNFSQRKATAGRVVHICNLPEGSCTEND 538
Query: 47 IIHLGIPFGRVTNVLVLKGKNQLLLHL 73
+I+LG+PFG+VTN +++K NQ L +
Sbjct: 539 VINLGLPFGKVTNYILMKSTNQAFLEM 565
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 536 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 573
>gi|334702287|gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum tuberosum]
Length = 441
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 36/46 (78%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS+V+H+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 4 PSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|359480735|ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Vitis vinifera]
Length = 448
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ E++E +++ L PFG VT +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQ 49
>gi|294955170|ref|XP_002788430.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239903853|gb|EER20226.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 366
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+PS+V+++RN+P VTE +II + FGRV N+L+L+ K + E E
Sbjct: 11 QPSKVLYVRNVPESVTEQDIIAYCLTFGRVVNILLLRDKRHGFIEFEDE 59
>gi|147856398|emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
Length = 476
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ E++E +++ L PFG VT +++L+ KNQ LL ++
Sbjct: 3 EPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQ 49
>gi|308509800|ref|XP_003117083.1| hypothetical protein CRE_02201 [Caenorhabditis remanei]
gi|308241997|gb|EFO85949.1| hypothetical protein CRE_02201 [Caenorhabditis remanei]
Length = 273
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
S+V+H+RNIP ++ + E++ L I +G V+N ++LKGK+Q + E E
Sbjct: 134 SKVVHVRNIPPDLVDLELMQLCIQYGPVSNYMMLKGKSQAFVEYEEE 180
>gi|388522351|gb|AFK49237.1| unknown [Lotus japonicus]
Length = 86
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 55
>gi|356535770|ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 443
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ L+ ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQ 49
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN--VLVLKGKNQLLLHLEAEIIHLGIPFGR 86
P+++IH+ +P ++TE EI+ L G + N V + GK Q L+ E E +
Sbjct: 364 PTKMIHLSTLPLDITEEEIVSLVEEHGIIVNSKVFEMNGKKQALVQFENE--------EQ 415
Query: 87 VTNVLVLKGKNQVSLISG 104
T LV K S +SG
Sbjct: 416 ATEALVCK---HASTLSG 430
>gi|363814551|ref|NP_001242751.1| uncharacterized protein LOC100819672 [Glycine max]
gi|255639782|gb|ACU20184.1| unknown [Glycine max]
Length = 431
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ L+ ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQ 49
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN--VLVLKGKNQLLLHL 73
P+++IH+ +P ++TE EI+ L G + N V + GK Q L+
Sbjct: 363 SPTKMIHLSTLPQDITEEEIVSLVEEHGTIVNSKVFEMNGKKQALVQF 410
>gi|256077594|ref|XP_002575087.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360045192|emb|CCD82740.1| putative polypyrimidine tract binding protein [Schistosoma
mansoni]
Length = 584
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 17 QAKLDRQKSDFKP-SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+A+LD S+ P SRV+HIR +P++V E E+ L IPFG + N+++ + Q L+ ++
Sbjct: 28 KARLDSTSSNSLPESRVLHIRGLPSDVNELEVSTLAIPFGSIANMILTRKNCQALIEMD 86
>gi|209362272|gb|ACI43571.1| RBP50 [Cucurbita maxima]
Length = 445
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ L+ ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQ 49
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRV--TNVLVLKGKNQLLLHLEAEIIHLGIPFG 85
P+++IHI ++ EVTE EI++L G + T + + GK Q L+ + E
Sbjct: 365 SPTKMIHISSLSQEVTEEEIVNLLEEHGPIINTKLFEMNGKKQALIMFDTE--------E 416
Query: 86 RVTNVLVLKGKNQVS 100
+ T LV K + +S
Sbjct: 417 QATEALVCKHASSLS 431
>gi|357443609|ref|XP_003592082.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481130|gb|AES62333.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|388492616|gb|AFK34374.1| unknown [Medicago truncatula]
Length = 443
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 37/47 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ L+ ++
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQ 49
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN--VLVLKGKNQLLLHLEAEIIHLGIPFG 85
P+++IH+ +P ++TE EI+ L G + N V + GK Q L+ E E
Sbjct: 363 SPTKMIHLSTLPQDITEDEIVTLLEEHGTIVNSKVFEMNGKKQGLVQFETE--------D 414
Query: 86 RVTNVLVLKGKNQVS 100
+ T LV K +S
Sbjct: 415 QATEALVCKHATSLS 429
>gi|414870438|tpg|DAA48995.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 140
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKG--KNQLLLHL--EAEIIHLGIPF 84
PS+V+H+RN+P E TE E++ L PFGRV N + G +NQ + + + I + +
Sbjct: 15 PSKVLHLRNMPWECTEEELVDLCKPFGRVVNTMCNVGANRNQAFVEFADQNQAISMVSYY 74
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 75 ASSSEPAQVRGK---TVYIQYSNRQ 96
>gi|449275589|gb|EMC84402.1| putative RNA-binding protein 20 [Columba livia]
Length = 1192
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 481 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 524
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 495 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYSEAAQA 532
>gi|444709487|gb|ELW50499.1| putative RNA-binding protein 20 [Tupaia chinensis]
Length = 1148
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 389 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 432
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 403 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 440
>gi|440906853|gb|ELR57070.1| Putative RNA-binding protein 20, partial [Bos grunniens mutus]
Length = 1155
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 463 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 506
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 477 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 514
>gi|431895444|gb|ELK04960.1| Putative RNA-binding protein 20 [Pteropus alecto]
Length = 1096
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 420 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 463
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 434 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 471
>gi|426366180|ref|XP_004050140.1| PREDICTED: RNA-binding protein 20 [Gorilla gorilla gorilla]
Length = 1227
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 518 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 561
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 532 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 569
>gi|426253103|ref|XP_004020240.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 20 [Ovis aries]
Length = 1214
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 512 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 555
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 526 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 563
>gi|74209138|dbj|BAE24961.1| unnamed protein product [Mus musculus]
Length = 809
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 520 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 563
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 534 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 571
>gi|410976123|ref|XP_003994473.1| PREDICTED: probable RNA-binding protein 20 [Felis catus]
Length = 1171
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 463 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 506
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 477 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 514
>gi|403259521|ref|XP_003922258.1| PREDICTED: probable RNA-binding protein 20 [Saimiri boliviensis
boliviensis]
Length = 1219
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 510 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 553
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 524 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 561
>gi|402881480|ref|XP_003904299.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 20
[Papio anubis]
Length = 1232
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 523 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 566
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 537 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 574
>gi|397510485|ref|XP_003825626.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 20
[Pan paniscus]
Length = 1225
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 516 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 559
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 530 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 567
>gi|395828098|ref|XP_003787223.1| PREDICTED: probable RNA-binding protein 20 [Otolemur garnettii]
Length = 1219
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 516 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 559
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 530 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 567
>gi|363735340|ref|XP_421755.3| PREDICTED: probable RNA-binding protein 20 [Gallus gallus]
Length = 1203
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 498 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 541
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 512 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYSEAAQA 549
>gi|355783096|gb|EHH65017.1| hypothetical protein EGM_18356, partial [Macaca fascicularis]
Length = 618
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 9 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 52
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 23 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 60
>gi|355562776|gb|EHH19370.1| hypothetical protein EGK_20061, partial [Macaca mulatta]
Length = 1182
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 473 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 516
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 487 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 524
>gi|354497495|ref|XP_003510855.1| PREDICTED: probable RNA-binding protein 20-like [Cricetulus
griseus]
Length = 1198
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 497 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 540
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 511 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 548
>gi|351706804|gb|EHB09723.1| Putative RNA-binding protein 20, partial [Heterocephalus glaber]
Length = 1165
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 455 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 498
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 469 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 506
>gi|348578985|ref|XP_003475262.1| PREDICTED: probable RNA-binding protein 20-like [Cavia porcellus]
Length = 1175
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 465 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 508
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 479 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 516
>gi|345792797|ref|XP_544017.3| PREDICTED: probable RNA-binding protein 20 [Canis lupus familiaris]
Length = 1233
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 524 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 567
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 538 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 575
>gi|345324051|ref|XP_003430775.1| PREDICTED: probable RNA-binding protein 20 [Ornithorhynchus
anatinus]
Length = 1226
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 525 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 568
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 37 NIPN-EVTEAEIIHL-GIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIPFGRVTNVLVLK 94
N P +VT ++H+ +P G T E ++I+LG+PFG+VTN +++K
Sbjct: 515 NYPQRKVTAGRVVHICNLPEGSCT---------------ENDVINLGLPFGKVTNYILMK 559
Query: 95 GKNQVSLISGYRNRQSA 111
NQ L Y A
Sbjct: 560 STNQAFLEMAYTEAAQA 576
>gi|344274393|ref|XP_003409001.1| PREDICTED: probable RNA-binding protein 20-like [Loxodonta
africana]
Length = 1425
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 722 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 765
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 736 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 773
>gi|344249836|gb|EGW05940.1| putative RNA-binding protein 20 [Cricetulus griseus]
Length = 756
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 421 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 464
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 435 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 472
>gi|338716450|ref|XP_003363456.1| PREDICTED: probable RNA-binding protein 20 [Equus caballus]
Length = 1224
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 516 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 559
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 530 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 567
>gi|332835299|ref|XP_508032.3| PREDICTED: probable RNA-binding protein 20 [Pan troglodytes]
Length = 1227
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 518 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 561
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 532 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 569
>gi|332212803|ref|XP_003255508.1| PREDICTED: RNA-binding protein 20 [Nomascus leucogenys]
Length = 1228
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 518 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 561
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 532 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 569
>gi|350593070|ref|XP_001925009.4| PREDICTED: probable RNA-binding protein 20 [Sus scrofa]
Length = 1175
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 472 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 515
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 486 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 523
>gi|326923965|ref|XP_003208203.1| PREDICTED: probable RNA-binding protein 20-like [Meleagris
gallopavo]
Length = 1364
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 653 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 696
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 667 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYSEAAQA 704
>gi|301755542|ref|XP_002913621.1| PREDICTED: probable RNA-binding protein 20-like [Ailuropoda
melanoleuca]
Length = 1202
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 491 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 534
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 505 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 542
>gi|297687372|ref|XP_002821189.1| PREDICTED: probable RNA-binding protein 20 [Pongo abelii]
Length = 1227
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 518 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 561
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 532 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 569
>gi|300797636|ref|NP_001179542.1| probable RNA-binding protein 20 [Bos taurus]
Length = 1210
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 518 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 561
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 532 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 569
>gi|297301843|ref|XP_001087170.2| PREDICTED: probable RNA-binding protein 20 [Macaca mulatta]
Length = 1235
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 526 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 569
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 540 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 577
>gi|296472625|tpg|DAA14740.1| TPA: RNA binding motif protein 20 [Bos taurus]
Length = 1210
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 518 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 561
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 532 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 569
>gi|296221207|ref|XP_002756638.1| PREDICTED: probable RNA-binding protein 20 [Callithrix jacchus]
Length = 1234
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 525 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 568
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 539 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 576
>gi|281347756|gb|EFB23340.1| hypothetical protein PANDA_001427 [Ailuropoda melanoleuca]
Length = 594
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 10 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 53
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 24 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 61
>gi|255982592|ref|NP_001101081.2| RNA-binding protein 20 [Rattus norvegicus]
gi|189170132|gb|ACD80091.1| RNA binding motif protein 20 [Rattus norvegicus]
Length = 1207
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 521 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 564
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 535 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 572
>gi|224052803|ref|XP_002194174.1| PREDICTED: RNA-binding protein 20 [Taeniopygia guttata]
Length = 1198
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 488 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 531
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 502 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYSEAAQA 539
>gi|197276594|ref|NP_001127835.1| RNA-binding protein 20 [Homo sapiens]
gi|317373512|sp|Q5T481.3|RBM20_HUMAN RecName: Full=RNA-binding protein 20; AltName: Full=RNA-binding
motif protein 20
gi|194338895|gb|ACF49364.1| RNA binding protein [Homo sapiens]
Length = 1227
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 518 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 561
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 532 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 569
>gi|410591659|sp|E9PT37.1|RBM20_RAT RecName: Full=RNA-binding protein 20; AltName: Full=RNA-binding
motif protein 20
Length = 1207
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 521 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 564
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 535 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 572
>gi|283046745|ref|NP_001164318.1| RNA-binding protein 20 [Mus musculus]
gi|410516938|sp|Q3UQS8.3|RBM20_MOUSE RecName: Full=RNA-binding protein 20; AltName: Full=RNA-binding
motif protein 20
Length = 1199
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 520 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 563
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 534 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 571
>gi|119569941|gb|EAW49556.1| hCG2036763 [Homo sapiens]
Length = 1244
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
RV+HI N+P TE ++I+LG+PFG+VTN +++K NQ L +
Sbjct: 507 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEM 550
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++I+LG+PFG+VTN +++K NQ L Y A
Sbjct: 521 ENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQA 558
>gi|357147883|ref|XP_003574528.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Brachypodium distachyon]
Length = 313
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 14 PSKVLHLRNMPWEATEEELVELCKPFGRVVNTMCNVGANR 53
>gi|326678801|ref|XP_683222.4| PREDICTED: probable RNA-binding protein 20-like [Danio rerio]
Length = 781
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 29 PSRVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
P RV+HI N+P TE ++I+LG+PFG+VTN ++++ +Q L +
Sbjct: 201 PGRVVHICNLPEGSCTENDVINLGLPFGKVTNYILMRSTHQAFLEM 246
>gi|449522938|ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Cucumis sativus]
Length = 457
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 55
>gi|359490453|ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Vitis vinifera]
Length = 446
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 55
>gi|356516021|ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 432
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 55
>gi|356509289|ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 433
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 55
>gi|302143674|emb|CBI22535.3| unnamed protein product [Vitis vinifera]
Length = 1311
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 55
>gi|363807178|ref|NP_001242348.1| uncharacterized protein LOC100810102 [Glycine max]
gi|255645249|gb|ACU23122.1| unknown [Glycine max]
Length = 428
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 55
>gi|414870439|tpg|DAA48996.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 314
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 15 PSKVLHLRNMPWECTEEELVDLCKPFGRVVNTMCNVGANR 54
>gi|255545042|ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223547490|gb|EEF48985.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 447
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 55
>gi|219363125|ref|NP_001137030.1| uncharacterized protein LOC100217199 [Zea mays]
gi|194698066|gb|ACF83117.1| unknown [Zea mays]
gi|414870440|tpg|DAA48997.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 296
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 15 PSKVLHLRNMPWECTEEELVDLCKPFGRVVNTMCNVGANR 54
>gi|115441273|ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|113534447|dbj|BAF06830.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|215697244|dbj|BAG91238.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 439
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 34/42 (80%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQL 69
+PS+VIHIRN+ +E++E+E++ + PFG V +++L+ KNQ+
Sbjct: 3 EPSKVIHIRNVGHEISESELLQVVQPFGTVAKLVMLRAKNQM 44
>gi|449456492|ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Cucumis sativus]
Length = 776
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 339 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 378
>gi|297796143|ref|XP_002865956.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
gi|297311791|gb|EFH42215.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGI 82
PS+V+H+RN+P E TE E+I LG PFG V N G N+ +E E ++ I
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAI 69
>gi|15238677|ref|NP_200130.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
gi|75333813|sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2
gi|9757999|dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
gi|53749130|gb|AAU90050.1| At5g53180 [Arabidopsis thaliana]
gi|55733737|gb|AAV59265.1| At5g53180 [Arabidopsis thaliana]
gi|332008935|gb|AED96318.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
Length = 429
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGI 82
PS+V+H+RN+P E TE E+I LG PFG V N G N+ +E E ++ I
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAI 69
>gi|326506386|dbj|BAJ86511.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 14 PSKVLHLRNMPWESTEEELVELCKPFGRVVNTMCNVGANR 53
>gi|357147881|ref|XP_003574527.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Brachypodium distachyon]
Length = 459
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 14 PSKVLHLRNMPWEATEEELVELCKPFGRVVNTMCNVGANR 53
>gi|125526877|gb|EAY74991.1| hypothetical protein OsI_02889 [Oryza sativa Indica Group]
Length = 583
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKG--KNQLLLHL--EAEIIHLGIPF 84
PS+VIH+RN+P + TE E++ LG PFG+V N G +NQ + + + I + F
Sbjct: 14 PSKVIHLRNLPWDCTEEELVELGSPFGKVVNTKCNVGANRNQAFVEFADQNQAIAMISYF 73
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
++GKN + Y NRQ
Sbjct: 74 ASSAEPAQVRGKN---VYLQYSNRQ 95
>gi|54290862|dbj|BAD61523.1| polypyrimidine tract-binding protein 1-like [Oryza sativa Japonica
Group]
gi|125571201|gb|EAZ12716.1| hypothetical protein OsJ_02633 [Oryza sativa Japonica Group]
gi|215740848|dbj|BAG97004.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKG--KNQLLLHL--EAEIIHLGIPF 84
PS+VIH+RN+P + TE E++ LG PFG+V N G +NQ + + + I + F
Sbjct: 14 PSKVIHLRNLPWDCTEEELVELGSPFGKVVNTKCNVGANRNQAFVEFADQNQAIAMISYF 73
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
++GKN + Y NRQ
Sbjct: 74 ASSAEPAQVRGKN---VYLQYSNRQ 95
>gi|168017642|ref|XP_001761356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687362|gb|EDQ73745.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+V+HIRN+ EV E++++ L FG V V++L+ KNQ LL ++
Sbjct: 3 EPSKVLHIRNVGPEVAESDLLQLAQSFGVVQKVVMLRAKNQALLQMQ 49
>gi|301627572|ref|XP_002942947.1| PREDICTED: probable RNA-binding protein 20-like [Xenopus (Silurana)
tropicalis]
Length = 1015
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 28 KPS--RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
KP+ RV+HI NIP E ++++LG+PFG+VTN +++K NQ L +
Sbjct: 374 KPAIGRVVHICNIPEGSCNENDVVNLGLPFGKVTNYILMKSTNQAFLEM 422
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 74 EAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
E ++++LG+PFG+VTN +++K NQ L Y A
Sbjct: 393 ENDVVNLGLPFGKVTNYILMKSTNQAFLEMAYTEAAEA 430
>gi|115476578|ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|42407521|dbj|BAD10638.1| putative polypyrimidine tract-binding protein homolog [Oryza
sativa Japonica Group]
gi|113623854|dbj|BAF23799.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|215695278|dbj|BAG90469.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640621|gb|EEE68753.1| hypothetical protein OsJ_27445 [Oryza sativa Japonica Group]
Length = 461
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 15 PSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANR 54
>gi|413922344|gb|AFW62276.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 458
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 15 PSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANR 54
>gi|413922343|gb|AFW62275.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 462
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 15 PSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANR 54
>gi|242079253|ref|XP_002444395.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
gi|241940745|gb|EES13890.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
Length = 462
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 15 PSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANR 54
>gi|218201199|gb|EEC83626.1| hypothetical protein OsI_29352 [Oryza sativa Indica Group]
Length = 461
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 15 PSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANR 54
>gi|147804914|emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
Length = 755
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 325 PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANR 364
>gi|118488039|gb|ABK95840.1| unknown [Populus trichocarpa]
Length = 442
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ LG PFG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELVELGKPFGKVVNTKCNVGPNR 55
>gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein homologue [Cicer arietinum]
Length = 442
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +E++E +++ L FG +T +++L+ KNQ LL +E
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQTFGVITKLVMLRTKNQALLQME 49
>gi|357463843|ref|XP_003602203.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355491251|gb|AES72454.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 828
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG PFG+V N G N+
Sbjct: 340 PSKVLHLRNLPWECTEEELIELGNPFGKVVNTKCNVGSNR 379
>gi|218188676|gb|EEC71103.1| hypothetical protein OsI_02887 [Oryza sativa Indica Group]
Length = 796
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+VIH+RN+P + TE E++ LG PFG+V N G N+
Sbjct: 14 PSKVIHLRNLPWDCTEEELVELGSPFGKVVNTKCNVGANR 53
>gi|326494672|dbj|BAJ94455.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528325|dbj|BAJ93344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFGRV N + G N+
Sbjct: 14 PSKVLHLRNMPWESTEEELVELCKPFGRVVNTMCNVGANR 53
>gi|119601315|gb|EAW80909.1| hCG41678, isoform CRA_b [Homo sapiens]
Length = 446
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 39 PNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
P +V E E+I L +PFG+VTN+L+LKGKNQ + + E
Sbjct: 170 PIDVIEGEVISLELPFGKVTNLLMLKGKNQAFIKMSTE 207
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 73 LEAEIIHLGIPFGRVTNVLVLKGKNQ 98
+E E+I L +PFG+VTN+L+LKGKNQ
Sbjct: 174 IEGEVISLELPFGKVTNLLMLKGKNQ 199
>gi|340375863|ref|XP_003386453.1| PREDICTED: polypyrimidine tract-binding protein 2-like
[Amphimedon queenslandica]
Length = 476
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
SRV+HIRN+P++ TEA++ L +G V+ VL+L+ KNQ + L
Sbjct: 20 SRVLHIRNLPSDATEADVFMLMSTYGAVSKVLLLRQKNQAFVEL 63
>gi|297852124|ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339785|gb|EFH70202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 432
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ S+VIH+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 ESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|358337425|dbj|GAA28121.2| regulator of differentiation 1 [Clonorchis sinensis]
Length = 757
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 11 TLVMVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLL 70
T V +++ ++ PSRV+ IRN+P ++TE E+ +L +PFG ++N+++ K L
Sbjct: 191 TGVKKLKSSFEQSAEGTAPSRVLFIRNLPLDITETEVANLALPFGVISNMVITKRSGLAL 250
Query: 71 LHL 73
+ L
Sbjct: 251 IEL 253
>gi|108708434|gb|ABF96229.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 318
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E E E++ L PFGR+ N G N+ +E I+ I F
Sbjct: 19 PSKVLHLRNLPWECAEEELVELCNPFGRIVNTKCGVGANRNQAFVEFTDINQAISMVSYF 78
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 79 ASSSEPAQIRGK---TVYIQYSNRQ 100
>gi|356541547|ref|XP_003539236.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Glycine max]
Length = 447
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
V A+ ++Q + PS+V+H RN+P + +E E+I L PFG+V N++ G N+ +E
Sbjct: 11 VSAQTEKQFT--VPSKVVHFRNLPKQCSEEELIKLCSPFGKVVNIMSGVGPNRNQGFVEF 68
Query: 76 EIIHLG---IPFGRVTNVLVLKGK 96
E I+ + + +N + L+GK
Sbjct: 69 EDINEANSIVSYYLSSNPVQLRGK 92
>gi|108708435|gb|ABF96230.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 300
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E E E++ L PFGR+ N G N+ +E I+ I F
Sbjct: 19 PSKVLHLRNLPWECAEEELVELCNPFGRIVNTKCGVGANRNQAFVEFTDINQAISMVSYF 78
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 79 ASSSEPAQIRGK---TVYIQYSNRQ 100
>gi|357130514|ref|XP_003566893.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Brachypodium distachyon]
Length = 544
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+VIH+RN+P E T+ E+ LG PFG+V N G N+
Sbjct: 15 PSKVIHVRNLPWECTDEELAELGSPFGKVVNTKCNVGANR 54
>gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|145324166|ref|NP_001077672.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|75323651|sp|Q6ICX4.1|PTBP3_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 3
gi|48525347|gb|AAT44975.1| At1g43190 [Arabidopsis thaliana]
gi|50198952|gb|AAT70479.1| At1g43190 [Arabidopsis thaliana]
gi|110737368|dbj|BAF00629.1| hypothetical protein [Arabidopsis thaliana]
gi|332193840|gb|AEE31961.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193841|gb|AEE31962.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 432
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ S+V+H+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 ESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193842|gb|AEE31963.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 430
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 36/47 (76%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ S+V+H+RN+ +E++E +++ L PFG +T +++L+ KNQ LL ++
Sbjct: 3 ESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQ 49
>gi|224135279|ref|XP_002322027.1| predicted protein [Populus trichocarpa]
gi|222869023|gb|EEF06154.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ LG PFG V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEEELVELGKPFGNVVNTKCNVGPNR 55
>gi|432848554|ref|XP_004066403.1| PREDICTED: RNA-binding protein 20-like [Oryzias latipes]
Length = 1088
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 27 FKPS-----RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
F PS RV+HI N+P TE ++I+LG+PFG+VTN ++++ +Q L +
Sbjct: 495 FAPSQASAGRVVHICNLPEGSCTENDVINLGLPFGKVTNYILMRSTHQAFLEM 547
>gi|341888865|gb|EGT44800.1| hypothetical protein CAEBREN_15314 [Caenorhabditis brenneri]
Length = 229
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 32/42 (76%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLL 71
S+V+H+RNIP ++ + E++ L I +G V+N ++LKGK+Q +
Sbjct: 121 SKVVHVRNIPPDLVDVELMQLCIQYGPVSNYMMLKGKSQAFV 162
>gi|357497747|ref|XP_003619162.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494177|gb|AES75380.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 354
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 35/45 (77%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
S+VIH+RN+ +E++E +++ L PFG VT +++L+ KNQ L+ ++
Sbjct: 5 SKVIHVRNVGHEISENDLLQLFQPFGVVTKLVMLRAKNQALVQMQ 49
>gi|118488224|gb|ABK95931.1| unknown [Populus trichocarpa]
Length = 473
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I L PFGR+ N G N+
Sbjct: 15 PSKVLHLRNLPWECTEEELIELCKPFGRIVNTKCNVGANR 54
>gi|168060645|ref|XP_001782305.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666235|gb|EDQ52895.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+I L PFG+V N V G N
Sbjct: 16 PSKVLHVRNLPWECSEEELIELCKPFGKVVNTKVNVGANH 55
>gi|413955317|gb|AFW87966.1| hypothetical protein ZEAMMB73_428640 [Zea mays]
Length = 229
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E E E++ L PFGR+ N G N +E ++ I F
Sbjct: 17 PSKVLHLRNLPWECAEEELVELCKPFGRIVNTKSGVGANHNQAFVEFTDVNQAISMVSYF 76
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 77 ASSSEPAQIRGK---TVYIQYSNRQ 98
>gi|168027197|ref|XP_001766117.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682760|gb|EDQ69176.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 488
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+I L PFG+V N V G N
Sbjct: 16 PSKVLHVRNLPWECSEEELIELCKPFGKVVNTKVNVGANH 55
>gi|414881408|tpg|DAA58539.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
Length = 560
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVL--VLKGKNQLLLHL--EAEIIHLGIPF 84
PS+V+H+RN+P + T E++ LG PFG+V N V +NQ + + + I + +
Sbjct: 15 PSKVLHLRNLPWDCTPEELVELGTPFGKVVNTKCGVGANRNQAFIEFGDQNQAIAMISYY 74
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
T ++GKN + Y NRQ
Sbjct: 75 ASSTEPAQVRGKN---VYLQYSNRQ 96
>gi|410917077|ref|XP_003972013.1| PREDICTED: probable RNA-binding protein 20-like [Takifugu rubripes]
Length = 1125
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 31 RVIHIRNIPN-EVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE-AEIIHLGIPFGRVT 88
RV+HI N+P TE ++I+LG+PFG+VTN ++++ +Q L + E + + ++T
Sbjct: 479 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMRSTHQAFLEMAYVEAAQAMVQYYQLT 538
Query: 89 NVLVLKGKNQVSLISGYRNRQ 109
++ K + + Y+ Q
Sbjct: 539 PAMINNQKLLIRMSKRYKELQ 559
>gi|116787007|gb|ABK24339.1| unknown [Picea sitchensis]
Length = 491
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I L PFGR+ N G N
Sbjct: 16 PSKVLHLRNLPWECTEEELIELCKPFGRIVNTKCNVGANH 55
>gi|238013298|gb|ACR37684.1| unknown [Zea mays]
gi|414867005|tpg|DAA45562.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 317
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E E E++ L PFGR+ N G N+ +E ++ I F
Sbjct: 17 PSKVLHLRNLPWECAEEELVELCKPFGRIINTKSGVGANRNQAFVEFTDVNQAISMVSYF 76
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 77 ASSSEPAQIRGK---TVYIQYSNRQ 98
>gi|294460075|gb|ADE75620.1| unknown [Picea sitchensis]
Length = 471
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLL---HLEAEI 77
+PS+V+HIRN+ +E++E ++++L FG VT +++L+ KNQ LL H+ A I
Sbjct: 3 EPSKVLHIRNVGHEISENDLLNLVQQFGLVTKLVMLRAKNQALLQMHHVSAAI 55
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRV--TNVLVLKGKNQLLLHLEAE 76
P+++IH+ ++P +VTE EII P G V + + + GK Q L+ E E
Sbjct: 389 PTKMIHVSSLPPDVTEDEIISHLEPHGNVVDSKLFEVNGKKQALVLFENE 438
>gi|313234966|emb|CBY24911.1| unnamed protein product [Oikopleura dioica]
Length = 788
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPF---GRVTNVLVLKGKNQLLLHLE 74
+ + K++ + SRV+H+R +P++VTE EI L +PF G + N + LK KNQ L ++
Sbjct: 136 EFKKMKTEDEGSRVLHVRGLPDDVTEHEIWKLVLPFKTLGLMVNFMHLKSKNQAFLEVD 194
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 14 MVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPF---GRVTNVLVLKGKNQLL 70
M ++ K++ + SRV+H+R +P++VTE EI L +PF G + N + LK KNQ
Sbjct: 301 MDCESNAQAMKTEDEGSRVLHVRGLPDDVTEHEIWKLVLPFKTLGLMVNFMHLKSKNQAF 360
Query: 71 LHLE 74
L ++
Sbjct: 361 LEVD 364
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN 59
PS +H+ NIP E+ E I L +PFG + N
Sbjct: 704 PSETLHLSNIPPEIEEDRIRELFVPFGNIKN 734
>gi|357119737|ref|XP_003561590.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Brachypodium distachyon]
Length = 522
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E TE E++ L PFGR+ N G N+ +E ++ I F
Sbjct: 19 PSKVLHLRNLPWECTEEELVELCKPFGRIVNTKSGVGANRNQAFVEFTDVNQAISMVSYF 78
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 79 ASSSEPAQIRGK---TVYIQYSNRQ 100
>gi|25146811|ref|NP_741041.1| Protein PTB-1, isoform a [Caenorhabditis elegans]
gi|20338920|emb|CAA85411.3| Protein PTB-1, isoform a [Caenorhabditis elegans]
Length = 615
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 31/39 (79%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
S+V+H+RNIP ++ + E++ L I +G V+N ++LKGK+Q
Sbjct: 120 SKVVHVRNIPPDLVDVELMQLCIQYGPVSNYMMLKGKSQ 158
>gi|326511767|dbj|BAJ92028.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E TE E++ L PFGR+ N G N+ +E ++ I F
Sbjct: 19 PSKVLHLRNLPWECTEDELVELCRPFGRIVNTKSGVGANRNQAFVEFTDVNQAISMVSYF 78
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 79 ASSSEPAQIRGK---TVYIQYSNRQ 100
>gi|242058047|ref|XP_002458169.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
gi|241930144|gb|EES03289.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
Length = 553
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P + T E++ LG PFG+V N G N+
Sbjct: 15 PSKVLHLRNLPWDCTPEELVELGTPFGKVVNTKCGVGANR 54
>gi|224141415|ref|XP_002324068.1| predicted protein [Populus trichocarpa]
gi|222867070|gb|EEF04201.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECTEEELIELCEPFGKIVNTKCNVGNNR 54
>gi|255584813|ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223527087|gb|EEF29269.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 483
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECTEEELIELCKPFGKIVNTKCNVGANR 54
>gi|290993108|ref|XP_002679175.1| predicted protein [Naegleria gruberi]
gi|284092791|gb|EFC46431.1| predicted protein [Naegleria gruberi]
Length = 482
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
PS+VIH R IP + T+ +++++ PFG VTN+L+LK L+ E +
Sbjct: 19 PSKVIHFRRIPIDTTQNDLMNMCQPFGTVTNILLLKNGQGLVQFAEVD 66
>gi|359497338|ref|XP_003635487.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein homolog 2-like, partial [Vitis vinifera]
Length = 273
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS+V H+RN+P E T E+I +G PFG++ N G N+ + +E
Sbjct: 16 PSKVFHLRNLPWECTGEELIEMGKPFGKIVNTKCNVGANRNQIFIE 61
>gi|357501943|ref|XP_003621260.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496275|gb|AES77478.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 618
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E++ L PFGR+ N G N+
Sbjct: 17 PSKVLHLRNLPWECSEEELVELCSPFGRIVNTKCNVGANR 56
>gi|357501941|ref|XP_003621259.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496274|gb|AES77477.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 780
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E++ L PFGR+ N G N+
Sbjct: 17 PSKVLHLRNLPWECSEEELVELCSPFGRIVNTKCNVGANR 56
>gi|357501945|ref|XP_003621261.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496276|gb|AES77479.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 592
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E++ L PFGR+ N G N+
Sbjct: 17 PSKVLHLRNLPWECSEEELVELCSPFGRIVNTKCNVGANR 56
>gi|115453245|ref|NP_001050223.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|18921326|gb|AAL82531.1|AC084766_17 putative polypyrimidine tract-binding protein [Oryza sativa
Japonica Group]
gi|108708433|gb|ABF96228.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113548694|dbj|BAF12137.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|215692946|dbj|BAG88366.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192927|gb|EEC75354.1| hypothetical protein OsI_11790 [Oryza sativa Indica Group]
gi|222625006|gb|EEE59138.1| hypothetical protein OsJ_11035 [Oryza sativa Japonica Group]
Length = 464
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E E E++ L PFGR+ N G N+ +E I+ I F
Sbjct: 19 PSKVLHLRNLPWECAEEELVELCNPFGRIVNTKCGVGANRNQAFVEFTDINQAISMVSYF 78
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 79 ASSSEPAQIRGK---TVYIQYSNRQ 100
>gi|225452861|ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform
2 [Vitis vinifera]
Length = 420
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANR 54
>gi|225452859|ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform
1 [Vitis vinifera]
gi|296082938|emb|CBI22239.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E++ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANR 54
>gi|320170468|gb|EFW47367.1| polypyrimidine tract-binding protein PTB-2 [Capsaspora owczarzaki
ATCC 30864]
Length = 546
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 31 RVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+V+H+RN+P +VTE E+I +G +G V N L+L K Q + +E
Sbjct: 69 KVLHVRNMPLDVTEPELIAIGAKYGPVANTLLLHNKGQGFIEME 112
>gi|388491010|gb|AFK33571.1| unknown [Lotus japonicus]
Length = 457
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H RN+P E TE E++ L PFG+V N G N+
Sbjct: 15 PSKVLHFRNLPWECTEDELVQLCCPFGQVMNTKCNVGANK 54
>gi|356546193|ref|XP_003541515.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 428
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E TE E+I LG FG+V N G N+
Sbjct: 16 PSKVLHLRNLPWECTEDELIELGKLFGKVVNTKCNVGANR 55
>gi|33772111|gb|AAQ54492.1| polypyrimidine tract-binding protein [Malus x domestica]
Length = 53
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E E E+I L PFG++ N G N+
Sbjct: 9 PSKVLHLRNLPWECAEEELIELCKPFGKIVNTKCNVGANR 48
>gi|223972751|gb|ACN30563.1| unknown [Zea mays]
gi|223973771|gb|ACN31073.1| unknown [Zea mays]
Length = 487
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E E E++ L PFGR+ N G N +E ++ I F
Sbjct: 17 PSKVLHLRNLPWECAEEELVELCKPFGRIVNTKSGVGANHNQAFVEFTDVNQAISMVSYF 76
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 77 ASSSEPAQIRGK---TVYIQYSNRQ 98
>gi|226495275|ref|NP_001151769.1| polypyrimidine tract-binding protein [Zea mays]
gi|195649587|gb|ACG44261.1| polypyrimidine tract-binding protein [Zea mays]
Length = 487
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E E E++ L PFGR+ N G N +E ++ I F
Sbjct: 17 PSKVLHLRNLPWECAEEELVELCKPFGRIVNTKSGVGANHNQAFVEFTDVNQAISMVSYF 76
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 77 ASSSEPAQIRGK---TVYIQYSNRQ 98
>gi|226481683|emb|CAX73739.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ PS V+HIR +P E +++ + P+GR+ +V ++ KNQ L+ E
Sbjct: 20 EIDPSPVVHIRGLPRHSVELDVVKVFQPYGRIRDVAMMPQKNQALVEFE 68
>gi|226481681|emb|CAX73738.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ PS V+HIR +P E +++ + P+GR+ +V ++ KNQ L+ E
Sbjct: 20 EIDPSPVVHIRGLPRHSVELDVVKVFQPYGRIRDVAMMPQKNQALVEFE 68
>gi|226467722|emb|CAX69737.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 562
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+ PS V+HIR +P E +++ + P+GR+ +V ++ KNQ L+ E
Sbjct: 20 EIDPSPVVHIRGLPRHSVELDVVKVFQPYGRIRDVAMMPQKNQALVEFE 68
>gi|414867006|tpg|DAA45563.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 504
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIP----F 84
PS+V+H+RN+P E E E++ L PFGR+ N G N+ +E ++ I F
Sbjct: 17 PSKVLHLRNLPWECAEEELVELCKPFGRIINTKSGVGANRNQAFVEFTDVNQAISMVSYF 76
Query: 85 GRVTNVLVLKGKNQVSLISGYRNRQ 109
+ ++GK ++ Y NRQ
Sbjct: 77 ASSSEPAQIRGK---TVYIQYSNRQ 98
>gi|242040789|ref|XP_002467789.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
gi|241921643|gb|EER94787.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
Length = 486
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN 59
PS+V+H+RN+P E E E++ L PFGR+ N
Sbjct: 17 PSKVLHLRNLPWECAEEELVELCKPFGRIVN 47
>gi|55733800|gb|AAV59307.1| putative polypyrimidine track-binding protein [Oryza sativa
Japonica Group]
Length = 389
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLK 64
+PS+VIHIRN+ +E+ EA+++ L PFG V+ + +L+
Sbjct: 3 EPSKVIHIRNVGHEIAEADLLQLLQPFGNVSKIALLQ 39
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLK--GKNQLLLHLEAE 76
P+++IHI +P E+TE I++ G V N + + GK Q L+ E+E
Sbjct: 310 PTKMIHISALPQEITEDAILNHVSEHGSVVNTKLFEVNGKRQALIQFESE 359
>gi|302789199|ref|XP_002976368.1| hypothetical protein SELMODRAFT_104811 [Selaginella
moellendorffii]
gi|302811042|ref|XP_002987211.1| hypothetical protein SELMODRAFT_125500 [Selaginella
moellendorffii]
gi|300145108|gb|EFJ11787.1| hypothetical protein SELMODRAFT_125500 [Selaginella
moellendorffii]
gi|300155998|gb|EFJ22628.1| hypothetical protein SELMODRAFT_104811 [Selaginella
moellendorffii]
Length = 440
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+HIRN+P E TE E+I L FG+V N G N+
Sbjct: 16 PSKVLHIRNLPWECTEEELIELCKMFGKVVNTKCNVGTNR 55
>gi|294946321|ref|XP_002785022.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239898406|gb|EER16818.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 566
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
S+V+++RNIP ++E +I FG+VTN+L+L+ K + E E
Sbjct: 36 SKVLYVRNIPMSLSEQNLIAYCQSFGQVTNILILRDKRHGFIEFENE 82
>gi|356568680|ref|XP_003552538.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 304
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECSEEELRELCRPFGKIVNTKCNVGANR 54
>gi|255636160|gb|ACU18422.1| unknown [Glycine max]
Length = 304
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECSEEELRELCRPFGKIVNTKCNVGANR 54
>gi|294461205|gb|ADE76165.1| unknown [Picea sitchensis]
Length = 461
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
+ S+V+HIRN+ E++E +++ L FG VT +++L+ KNQ L+ +
Sbjct: 3 EASKVLHIRNVGAEISENDLLQLVQRFGTVTKLVMLRAKNQALMQM 48
>gi|302821012|ref|XP_002992171.1| hypothetical protein SELMODRAFT_44533 [Selaginella
moellendorffii]
gi|300140097|gb|EFJ06826.1| hypothetical protein SELMODRAFT_44533 [Selaginella
moellendorffii]
Length = 414
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 31 RVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+V+H+RN+ +V E +++ L PFGRV+ +++L+ NQ + ++
Sbjct: 1 KVLHLRNLAQDVAEDDLVELVRPFGRVSGIVLLRTWNQAFVQMQ 44
>gi|302791034|ref|XP_002977284.1| hypothetical protein SELMODRAFT_54589 [Selaginella
moellendorffii]
gi|300155260|gb|EFJ21893.1| hypothetical protein SELMODRAFT_54589 [Selaginella
moellendorffii]
Length = 414
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 31 RVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+V+H+RN+ +V E +++ L PFGRV+ +++L+ NQ + ++
Sbjct: 1 KVLHLRNLAQDVAEDDLVELVRPFGRVSGIVLLRTWNQAFVQMQ 44
>gi|149598834|ref|XP_001518090.1| PREDICTED: matrin-3 [Ornithorhynchus anatinus]
Length = 836
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + QK + KP RVIH+ N+P+ +++ +I L P+G++ N ++++
Sbjct: 472 KYKRIKKPEGGKSEQKFEPKPELGRVIHLSNLPHSGYSDSAVIKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|356568678|ref|XP_003552537.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 467
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECSEEELRELCRPFGKIVNTKCNVGANR 54
>gi|356568676|ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECSEEELRELCRPFGKIVNTKCNVGANR 54
>gi|356531752|ref|XP_003534440.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 467
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECSEEELRELCKPFGKIINTKCNVGANR 54
>gi|356531750|ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 505
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECSEEELRELCKPFGKIINTKCNVGANR 54
>gi|356531748|ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E +E E+ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWECSEEELRELCKPFGKIINTKCNVGANR 54
>gi|326928257|ref|XP_003210297.1| PREDICTED: matrin-3-like [Meleagris gallopavo]
Length = 902
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + ++K D++ KP RVIH+ N+P+ ++ ++ L P+G++ N ++++
Sbjct: 463 KYKRIKKPESKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRM 522
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 523 KSQAFIEME 531
>gi|403358967|gb|EJY79143.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 479
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIH-LGIPFGRVTNVLVLKGKNQLLLHLE 74
+ K Q FKP++V+ +RN+P +VTE E++ L +G V VL++ K + +
Sbjct: 84 INDKQSNQNHQFKPTKVLFLRNLPKDVTEQELMRVLSYQYGFVEKVLIMIQKAHAFIQFD 143
Query: 75 A 75
+
Sbjct: 144 S 144
>gi|81076794|gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
Length = 442
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P + ++ E++ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANR 54
>gi|77745463|gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum]
Length = 437
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P + ++ E++ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANR 54
>gi|70953578|ref|XP_745881.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526340|emb|CAH77570.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 535
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 23 QKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKN 67
+ D KP R++ ++NIP E TE E++ L PFG + N+ + KN
Sbjct: 22 HRFDDKPLRILCVKNIPKETTENELLELFKPFGSIENINLKVNKN 66
>gi|334702291|gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum]
Length = 467
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P + ++ E++ L PFG++ N G N+
Sbjct: 15 PSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANR 54
>gi|449267288|gb|EMC78254.1| Matrin-3 [Columba livia]
Length = 902
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D++ KP RVIH+ N+P+ ++ ++ L P+G++ N ++++
Sbjct: 463 KYKRIKKPEGKPDQKNEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRM 522
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 523 KSQAFIEME 531
>gi|395504625|ref|XP_003756648.1| PREDICTED: matrin-3 [Sarcophilus harrisii]
Length = 851
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 23 QKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
QK + KP RVIH+ N+P+ +++ +I L P+G++ N ++++ K+Q + +E
Sbjct: 486 QKFEQKPELGRVIHLSNLPHSGYSDSAVIKLAEPYGKIKNYILMRMKSQAFIEME 540
>gi|327532756|ref|NP_001192193.1| matrin-3 [Monodelphis domestica]
Length = 851
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 23 QKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
QK + KP RVIH+ N+P+ +++ +I L P+G++ N ++++ K+Q + +E
Sbjct: 486 QKFEQKPELGRVIHLSNLPHSGYSDSAVIKLAEPYGKIKNYILMRMKSQAFIEME 540
>gi|82595873|ref|XP_726028.1| erythrocyte membrane protein [Plasmodium yoelii yoelii 17XNL]
gi|23481263|gb|EAA17593.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [Plasmodium yoelii yoelii]
Length = 568
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 23 QKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKN 67
+ D KP R++ ++NIP E TE E++ L PFG + N+ + KN
Sbjct: 22 HRFDDKPLRILCVKNIPKETTENELLELFKPFGSIENINLKVNKN 66
>gi|327532717|ref|NP_001192185.1| matrin-3 [Taeniopygia guttata]
Length = 903
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D++ KP RVIH+ N+P+ ++ ++ L P+G++ N ++++
Sbjct: 463 KYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRM 522
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 523 KSQAFIEME 531
>gi|403370184|gb|EJY84954.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 734
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 8 VKYTLVMVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIH-LGIPFGRVTNVLVLKGK 66
++ + + K Q FKP++V+ +RN+P +VTE E++ L +G V VL++ K
Sbjct: 125 IQSNMKSFINDKQSNQNHQFKPTKVLFLRNLPKDVTEQELMRVLSYQYGFVEQVLIMIQK 184
Query: 67 NQLLLHLEA 75
+ ++
Sbjct: 185 AHAFIQFDS 193
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 8 VKYTLVMVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIH-LGIPFGRVTNVLVLKGK 66
++ + + K Q FKP++V+ +RN+P +VTE E++ L +G V VL++ K
Sbjct: 331 IQSNMKSFINDKQSNQNHQFKPTKVLFLRNLPKDVTEQELMRVLSYQYGFVEKVLIMIQK 390
Query: 67 NQLLLHLEA 75
+ ++
Sbjct: 391 AHAFIQFDS 399
>gi|344264996|ref|XP_003404575.1| PREDICTED: matrin-3 [Loxodonta africana]
Length = 842
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L PFG++ N ++++
Sbjct: 470 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPFGKIKNYILMRM 528
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 529 KSQAFIEME 537
>gi|45383822|ref|NP_989478.1| matrin-3 [Gallus gallus]
gi|17221616|dbj|BAB78469.1| nuclear protein matrin 3 [Gallus gallus]
Length = 902
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D++ KP RVIH+ N+P+ ++ ++ L P+G++ N ++++
Sbjct: 463 KYKRIKKPEGKPDQKTEAPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRM 522
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 523 KSQAFIEME 531
>gi|326430347|gb|EGD75917.1| polypyrimidine tract-binding protein 1 isoform d [Salpingoeca sp.
ATCC 50818]
Length = 496
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLL 70
KPSRVIHIRN+P+ T A+++ + + +NV+++ K L+
Sbjct: 30 KPSRVIHIRNLPDSATAADLLPHLMKYATPSNVIMMTNKQALV 72
>gi|428170649|gb|EKX39572.1| hypothetical protein GUITHDRAFT_114298 [Guillardia theta CCMP2712]
Length = 580
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLH---LEAEIIHLG--- 81
+PS+V+HIRN+P E E ++ L FG V V L K+Q + LE L
Sbjct: 7 EPSKVLHIRNLPEECNEGDLKTLASRFGEVRRVFHLSRKHQAFVEFVSLEDSARMLAECE 66
Query: 82 -IPFGRVTNVLVLKGKNQVSL 101
+P T V+V + N+ L
Sbjct: 67 SVPIRVGTRVIVAQYSNKTEL 87
>gi|449441197|ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Cucumis sativus]
Length = 434
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 28 KPSRVIHIRNI--PNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+PS+VIH+RN+ +++ +++ L PFG +T +++L+ KNQ L+ ++
Sbjct: 3 EPSKVIHVRNVGLSLSLSQNDLLQLFQPFGVITKLVMLRAKNQALMQMQ 51
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN--VLVLKGKNQLLLHLEAEIIHLGIPFG 85
P+++IHI ++ EVTE EI+ L G + N + + GK Q L+ + E
Sbjct: 354 SPTKMIHISSLSQEVTEEEIVSLLEEHGPIVNSKLFEMNGKKQALIMFDTE--------E 405
Query: 86 RVTNVLVLKGKNQVSLISG 104
+ T LV K SL+SG
Sbjct: 406 QATEALVCK---HASLLSG 421
>gi|357496461|ref|XP_003618519.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355493534|gb|AES74737.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 483
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 22 RQKSDFK----PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
+Q+ F+ PS+V+H RN+P E ++ E+ L PFG+V + G NQ
Sbjct: 5 KQQQQFRCTQIPSKVLHFRNLPWECSDEELADLCSPFGKVMSTKCNVGVNQ 55
>gi|149034648|gb|EDL89385.1| polypyrimidine tract binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 490
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 51 GIPFGRVTNVLVLKGKNQLLLHLEAE 76
G+PFG+VTN+L+LKGKNQ + + E
Sbjct: 38 GLPFGKVTNLLMLKGKNQAFIEMSTE 63
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 81 GIPFGRVTNVLVLKGKNQV 99
G+PFG+VTN+L+LKGKNQ
Sbjct: 38 GLPFGKVTNLLMLKGKNQA 56
>gi|3395938|gb|AAC62015.1| polypyrimidine tract-binding protein homolog [Arabidopsis
thaliana]
Length = 418
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E E E+I L FG++ N G N+
Sbjct: 15 PSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANR 54
>gi|297832822|ref|XP_002884293.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
gi|297330133|gb|EFH60552.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E E E+I L FG++ N G N+
Sbjct: 15 PSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANR 54
>gi|186509647|ref|NP_001118547.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|332640096|gb|AEE73617.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 370
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E E E+I L FG++ N G N+
Sbjct: 15 PSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANR 54
>gi|15232047|ref|NP_186764.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|75336151|sp|Q9MAC5.1|PTBP1_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 1
gi|6714473|gb|AAF26159.1|AC008261_16 putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
gi|222423255|dbj|BAH19604.1| AT3G01150 [Arabidopsis thaliana]
gi|332640095|gb|AEE73616.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 399
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQ 68
PS+V+H+RN+P E E E+I L FG++ N G N+
Sbjct: 15 PSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANR 54
>gi|26331660|dbj|BAC29560.1| unnamed protein product [Mus musculus]
gi|148699700|gb|EDL31647.1| mCG13402, isoform CRA_d [Mus musculus]
Length = 489
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 51 GIPFGRVTNVLVLKGKNQLLLHLEAE 76
G+PFG+VTN+L+LKGKNQ + + E
Sbjct: 38 GLPFGKVTNLLMLKGKNQAFIEMNTE 63
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 81 GIPFGRVTNVLVLKGKNQVSLISGYRNRQSAALMMI 116
G+PFG+VTN+L+LKGKNQ + N + AA M+
Sbjct: 38 GLPFGKVTNLLMLKGKNQAFI---EMNTEEAANTMV 70
>gi|291224827|ref|XP_002732404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Saccoglossus kowalevskii]
Length = 423
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE------------AE 76
PS V+H+R + + V EA+++ FG ++ V+++ K Q L+ E +
Sbjct: 45 PSPVVHVRGLSDTVIEADLVEAVQHFGPISYVIMMPRKRQALIEFEDIEGAKACVNYAQD 104
Query: 77 IIH-LGIPFGRVTNVLVLKGKNQVSLISGY 105
++H + PFG V +++ K KN V + Y
Sbjct: 105 VMHTICNPFGPVQRIVIFK-KNGVQTMIEY 133
>gi|440902365|gb|ELR53162.1| Matrin-3 [Bos grunniens mutus]
Length = 898
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 474 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 532
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 533 KSQAFIEME 541
>gi|426350159|ref|XP_004042648.1| PREDICTED: matrin-3 [Gorilla gorilla gorilla]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|426229640|ref|XP_004008897.1| PREDICTED: matrin-3 isoform 4 [Ovis aries]
Length = 561
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|426229634|ref|XP_004008894.1| PREDICTED: matrin-3 isoform 1 [Ovis aries]
gi|426229636|ref|XP_004008895.1| PREDICTED: matrin-3 isoform 2 [Ovis aries]
Length = 849
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|6563246|gb|AAF17217.1|AF117236_1 matrin 3 [Homo sapiens]
Length = 848
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 474 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 532
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 533 KSQAFIEME 541
>gi|9956070|gb|AAG02007.1| similar to Homo sapiens mRNA for KIAA0723 protein with GenBank
Accession Number AB018266.1 [Homo sapiens]
Length = 407
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 33 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 91
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 92 KSQAFIEME 100
>gi|327532722|ref|NP_001192187.1| matrin-3 [Canis lupus familiaris]
Length = 849
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|74203843|dbj|BAE28522.1| unnamed protein product [Mus musculus]
Length = 393
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 20 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 78
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 79 KSQAFIEME 87
>gi|74180469|dbj|BAE34177.1| unnamed protein product [Mus musculus]
Length = 650
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 277 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 335
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 336 KSQAFIEME 344
>gi|71059973|emb|CAJ18530.1| Matr3 [Mus musculus]
Length = 846
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|40788339|dbj|BAA34443.2| KIAA0723 protein [Homo sapiens]
Length = 853
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 479 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 537
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 538 KSQAFIEME 546
>gi|37360062|dbj|BAC98009.1| mKIAA0723 protein [Mus musculus]
gi|148664715|gb|EDK97131.1| mCG121979, isoform CRA_c [Mus musculus]
Length = 852
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 479 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 537
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 538 KSQAFIEME 546
>gi|61889073|ref|NP_062022.2| matrin-3 [Rattus norvegicus]
gi|60458501|dbj|BAD90681.1| nuclear scaffold protein P130/MAT3 [Rattus norvegicus]
gi|149017207|gb|EDL76258.1| rCG49469, isoform CRA_a [Rattus norvegicus]
Length = 845
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|25141233|ref|NP_034901.2| matrin-3 [Mus musculus]
gi|55976533|sp|Q8K310.1|MATR3_MOUSE RecName: Full=Matrin-3
gi|20810077|gb|AAH29070.1| Matrin 3 [Mus musculus]
gi|26352840|dbj|BAC40050.1| unnamed protein product [Mus musculus]
gi|60552524|gb|AAH90833.1| Matrin 3 [Mus musculus]
gi|74189445|dbj|BAE22731.1| unnamed protein product [Mus musculus]
Length = 846
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|106964|pir||B40016 matrin 3 - human (fragment)
Length = 417
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 43 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 101
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 102 KSQAFIEME 110
>gi|417412746|gb|JAA52742.1| Putative hnrnp-l/ptb/hephaestus splicing factor family, partial
[Desmodus rotundus]
Length = 801
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 479 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 537
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 538 KSQAFIEME 546
>gi|417412735|gb|JAA52739.1| Putative hnrnp-l/ptb/hephaestus splicing factor family, partial
[Desmodus rotundus]
Length = 800
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 479 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 537
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 538 KSQAFIEME 546
>gi|417412733|gb|JAA52738.1| Putative hnrnp-l/ptb/hephaestus splicing factor family, partial
[Desmodus rotundus]
Length = 800
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 479 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 537
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 538 KSQAFIEME 546
>gi|417411548|gb|JAA52205.1| Putative hnrnp-l/ptb/hephaestus splicing factor family, partial
[Desmodus rotundus]
Length = 545
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 170 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 228
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 229 KSQAFIEME 237
>gi|417404935|gb|JAA49198.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 843
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|417404931|gb|JAA49196.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 842
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|410948273|ref|XP_003980865.1| PREDICTED: matrin-3 [Felis catus]
Length = 561
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|403285314|ref|XP_003933976.1| PREDICTED: matrin-3 isoform 5 [Saimiri boliviensis boliviensis]
Length = 559
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|403285306|ref|XP_003933972.1| PREDICTED: matrin-3 isoform 1 [Saimiri boliviensis boliviensis]
gi|403285308|ref|XP_003933973.1| PREDICTED: matrin-3 isoform 2 [Saimiri boliviensis boliviensis]
gi|403285310|ref|XP_003933974.1| PREDICTED: matrin-3 isoform 3 [Saimiri boliviensis boliviensis]
gi|403285312|ref|XP_003933975.1| PREDICTED: matrin-3 isoform 4 [Saimiri boliviensis boliviensis]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|402896770|ref|XP_003911459.1| PREDICTED: matrin-3-like, partial [Papio anubis]
Length = 747
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 373 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 431
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 432 KSQAFIEME 440
>gi|395817478|ref|XP_003782197.1| PREDICTED: matrin-3 isoform 1 [Otolemur garnettii]
gi|395817480|ref|XP_003782198.1| PREDICTED: matrin-3 isoform 2 [Otolemur garnettii]
gi|395817482|ref|XP_003782199.1| PREDICTED: matrin-3 isoform 3 [Otolemur garnettii]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|355701324|gb|AES01646.1| matrin 3 [Mustela putorius furo]
Length = 779
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 479 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 537
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 538 KSQAFIEME 546
>gi|355750230|gb|EHH54568.1| hypothetical protein EGM_15437 [Macaca fascicularis]
Length = 895
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|351699410|gb|EHB02329.1| Matrin-3 [Heterocephalus glaber]
Length = 1033
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 429 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 487
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 488 KSQAFIEME 496
>gi|350581152|ref|XP_003480972.1| PREDICTED: matrin-3 [Sus scrofa]
Length = 561
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|348582860|ref|XP_003477194.1| PREDICTED: matrin-3-like [Cavia porcellus]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|354490419|ref|XP_003507355.1| PREDICTED: matrin-3-like [Cricetulus griseus]
gi|344241519|gb|EGV97622.1| Matrin-3 [Cricetulus griseus]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|332234598|ref|XP_003266492.1| PREDICTED: matrin-3 isoform 3 [Nomascus leucogenys]
Length = 559
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|327365344|ref|NP_001192167.1| matrin-3 isoform 2 [Macaca mulatta]
gi|387539856|gb|AFJ70555.1| matrin-3 isoform b [Macaca mulatta]
Length = 559
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|311250254|ref|XP_003124025.1| PREDICTED: matrin-3 isoform 1 [Sus scrofa]
gi|335283551|ref|XP_003354341.1| PREDICTED: matrin-3 [Sus scrofa]
gi|350581147|ref|XP_003480970.1| PREDICTED: matrin-3 [Sus scrofa]
gi|350581149|ref|XP_003480971.1| PREDICTED: matrin-3 [Sus scrofa]
Length = 849
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|301753641|ref|XP_002912628.1| PREDICTED: matrin-3-like isoform 2 [Ailuropoda melanoleuca]
Length = 849
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|301753639|ref|XP_002912627.1| PREDICTED: matrin-3-like isoform 1 [Ailuropoda melanoleuca]
Length = 897
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|426229638|ref|XP_004008896.1| PREDICTED: matrin-3 isoform 3 [Ovis aries]
gi|296485280|tpg|DAA27395.1| TPA: matrin 3 [Bos taurus]
Length = 844
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|327365358|ref|NP_001192169.1| matrin-3 [Callithrix jacchus]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|327532719|ref|NP_001192186.1| matrin-3 [Oryctolagus cuniculus]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|281345448|gb|EFB21032.1| hypothetical protein PANDA_000394 [Ailuropoda melanoleuca]
Length = 889
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|303227928|ref|NP_001181885.1| matrin-3 isoform b [Homo sapiens]
gi|221046228|dbj|BAH14791.1| unnamed protein product [Homo sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|194387940|dbj|BAG61383.1| unnamed protein product [Homo sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|194375966|dbj|BAG57327.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 135 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 193
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 194 KSQAFIEME 202
>gi|327532735|ref|NP_001192190.1| matrin-3 [Equus caballus]
Length = 849
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|148664713|gb|EDK97129.1| mCG121979, isoform CRA_a [Mus musculus]
Length = 508
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 135 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 193
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 194 KSQAFIEME 202
>gi|148664714|gb|EDK97130.1| mCG121979, isoform CRA_b [Mus musculus]
Length = 845
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 472 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 530
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 531 KSQAFIEME 539
>gi|156523084|ref|NP_001095956.1| matrin-3 [Bos taurus]
gi|134024643|gb|AAI34451.1| MATR3 protein [Bos taurus]
Length = 844
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|327365329|ref|NP_001192161.1| matrin-3 isoform 1 [Pan troglodytes]
gi|397518149|ref|XP_003829258.1| PREDICTED: matrin-3 isoform 1 [Pan paniscus]
gi|397518151|ref|XP_003829259.1| PREDICTED: matrin-3 isoform 2 [Pan paniscus]
gi|410227480|gb|JAA10959.1| matrin 3 [Pan troglodytes]
gi|410227482|gb|JAA10960.1| matrin 3 [Pan troglodytes]
gi|410255482|gb|JAA15708.1| matrin 3 [Pan troglodytes]
gi|410255484|gb|JAA15709.1| matrin 3 [Pan troglodytes]
gi|410351935|gb|JAA42571.1| matrin 3 [Pan troglodytes]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|327365331|ref|NP_001192162.1| matrin-3 isoform 2 [Pan troglodytes]
gi|397518153|ref|XP_003829260.1| PREDICTED: matrin-3 isoform 3 [Pan paniscus]
gi|410227484|gb|JAA10961.1| matrin 3 [Pan troglodytes]
Length = 559
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 185 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 243
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 244 KSQAFIEME 252
>gi|327365342|ref|NP_001192166.1| matrin-3 isoform 1 [Macaca mulatta]
gi|328447201|ref|NP_001128910.2| matrin-3 isoform 1 [Pongo abelii]
gi|109078820|ref|XP_001114262.1| PREDICTED: matrin-3 isoform 2 [Macaca mulatta]
gi|332234594|ref|XP_003266490.1| PREDICTED: matrin-3 isoform 1 [Nomascus leucogenys]
gi|332234596|ref|XP_003266491.1| PREDICTED: matrin-3 isoform 2 [Nomascus leucogenys]
gi|402872652|ref|XP_003900220.1| PREDICTED: matrin-3 isoform 1 [Papio anubis]
gi|402872654|ref|XP_003900221.1| PREDICTED: matrin-3 isoform 2 [Papio anubis]
gi|380783363|gb|AFE63557.1| matrin-3 isoform a [Macaca mulatta]
gi|380783365|gb|AFE63558.1| matrin-3 isoform a [Macaca mulatta]
gi|383409099|gb|AFH27763.1| matrin-3 isoform a [Macaca mulatta]
gi|384942512|gb|AFI34861.1| matrin-3 isoform a [Macaca mulatta]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|197101369|ref|NP_001126563.1| matrin-3 isoform 1 [Pongo abelii]
gi|55731929|emb|CAH92673.1| hypothetical protein [Pongo abelii]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|55733482|emb|CAH93419.1| hypothetical protein [Pongo abelii]
Length = 615
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|55732173|emb|CAH92791.1| hypothetical protein [Pongo abelii]
Length = 459
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 37 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 95
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 96 KSQAFIEME 104
>gi|51476906|emb|CAH18419.1| hypothetical protein [Homo sapiens]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|21626466|ref|NP_061322.2| matrin-3 isoform a [Homo sapiens]
gi|62750354|ref|NP_954659.1| matrin-3 isoform a [Homo sapiens]
gi|303227924|ref|NP_001181883.1| matrin-3 isoform a [Homo sapiens]
gi|303227926|ref|NP_001181884.1| matrin-3 isoform a [Homo sapiens]
gi|12643409|sp|P43243.2|MATR3_HUMAN RecName: Full=Matrin-3
gi|15929154|gb|AAH15031.1| Matrin 3 [Homo sapiens]
gi|119582518|gb|EAW62114.1| hCG1981097, isoform CRA_a [Homo sapiens]
gi|119582519|gb|EAW62115.1| hCG1981097, isoform CRA_a [Homo sapiens]
gi|119582520|gb|EAW62116.1| hCG1981097, isoform CRA_a [Homo sapiens]
gi|119582521|gb|EAW62117.1| hCG1981097, isoform CRA_a [Homo sapiens]
gi|123995323|gb|ABM85263.1| matrin 3 [synthetic construct]
gi|157928841|gb|ABW03706.1| matrin 3 [synthetic construct]
gi|168267532|dbj|BAG09822.1| matrin-3 [synthetic construct]
Length = 847
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|149017209|gb|EDL76260.1| rCG49469, isoform CRA_c [Rattus norvegicus]
Length = 507
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 135 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 193
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 194 KSQAFIEME 202
>gi|328447203|ref|NP_001192198.1| matrin-3 isoform 2 [Pongo abelii]
gi|55728816|emb|CAH91147.1| hypothetical protein [Pongo abelii]
Length = 509
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 135 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 193
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 194 KSQAFIEME 202
>gi|193785533|dbj|BAG50899.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 135 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 193
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 194 KSQAFIEME 202
>gi|60219493|emb|CAI56758.1| hypothetical protein [Homo sapiens]
Length = 509
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 135 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 193
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 194 KSQAFIEME 202
>gi|156368308|ref|XP_001627637.1| predicted protein [Nematostella vectensis]
gi|156214552|gb|EDO35537.1| predicted protein [Nematostella vectensis]
Length = 203
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
PSRVIH R + + E ++I + PFG +T V +L Q L+ E+
Sbjct: 5 PSRVIHCRAVADGCKETDLIQVLQPFGTITYVTLLPKIRQALVEFES 51
>gi|74145585|dbj|BAE36204.1| unnamed protein product [Mus musculus]
Length = 846
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYVLMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|349602744|gb|AEP98788.1| Matrin-3-like protein, partial [Equus caballus]
Length = 392
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 148 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 206
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 207 KSQAFIEME 215
>gi|363747104|ref|XP_423682.3| PREDICTED: zinc finger protein 638-like [Gallus gallus]
Length = 194
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 31 RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
+ +H+ N+P E E E++ +G+ FG+V + +VLK +N+ +L LE+
Sbjct: 45 QFVHLGNLPEEGYREFEVVCVGLRFGKVDHYVVLKNRNKAILQLES 90
>gi|281205212|gb|EFA79405.1| RNA-binding region RNP-1 domain-containing protein
[Polysphondylium pallidum PN500]
Length = 437
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 27 FKPSRVIHIRNIPNEVTEAEIIHLGIPFGRV 57
+PS V+H R +P + EAEI L PFGRV
Sbjct: 55 LQPSAVVHCRGLPYNIGEAEITSLLAPFGRV 85
>gi|226481403|emb|CAX73599.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 535
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
D +PS VIHIR +P E ++I + FG + ++ ++ K Q L+ +
Sbjct: 14 DLEPSPVIHIRELPEHTLELDLIRVFEQFGSIRDIAMIPHKGQALIEFD 62
>gi|71745136|ref|XP_827198.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831363|gb|EAN76868.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261331414|emb|CBH14408.1| DRBD4 [Trypanosoma brucei gambiense DAL972]
Length = 327
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
SRVIH+RNI VT+ I +L FG + ++++L+ NQ L+ +E+
Sbjct: 81 SRVIHMRNITPNVTQLSIQNLVQNFGNIKHIVMLRQMNQALVEMES 126
>gi|66816231|ref|XP_642125.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60470245|gb|EAL68225.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 530
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 12 LVMVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLL- 70
L + ++ ++D+ +PS VIH R +P VT+A+I L PFG+V V +++ L+
Sbjct: 27 LKLEIENEIDKS---IEPSPVIHCRGLPYSVTDADIHALLSPFGKVEAVCLMRMGQALIE 83
Query: 71 ---LHLEAEIIHLGI--PF 84
+ II L I PF
Sbjct: 84 MDSIQTSTSIISLSITKPF 102
>gi|340056209|emb|CCC50538.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 314
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
SRVIH+RNI VT+ I +L FG + ++++L+ NQ L+ +E+
Sbjct: 80 SRVIHMRNITPNVTQLSIQNLVQNFGSIKHIVMLRQMNQALVEMES 125
>gi|71423973|ref|XP_812637.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70877443|gb|EAN90786.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
SRVIH+RNI VT+ I +L FG + ++++L+ NQ L+ +E+
Sbjct: 76 SRVIHMRNITPNVTQLSIQNLVQNFGNIKHIVMLRQMNQALVEMES 121
>gi|432889400|ref|XP_004075258.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
3 [Oryzias latipes]
Length = 490
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+R + + VTEA+++ FG ++ V+V+ K Q L+ E
Sbjct: 36 PSVVVHVRGLVDGVTEADLVEALQEFGAISYVVVMPNKRQALVEYE 81
>gi|432889398|ref|XP_004075257.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
2 [Oryzias latipes]
Length = 526
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+R + + VTEA+++ FG ++ V+V+ K Q L+ E
Sbjct: 36 PSVVVHVRGLVDGVTEADLVEALQEFGAISYVVVMPNKRQALVEYE 81
>gi|432889396|ref|XP_004075256.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
1 [Oryzias latipes]
Length = 519
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+R + + VTEA+++ FG ++ V+V+ K Q L+ E
Sbjct: 36 PSVVVHVRGLVDGVTEADLVEALQEFGAISYVVVMPNKRQALVEYE 81
>gi|348522989|ref|XP_003449006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
2 [Oreochromis niloticus]
Length = 492
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+R + + VTEA+++ FG ++ V+V+ K Q L+ E
Sbjct: 36 PSVVVHVRGLVDGVTEADLVEALQEFGAISYVVVMPNKRQALVEYE 81
>gi|348522987|ref|XP_003449005.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
1 [Oreochromis niloticus]
Length = 527
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+R + + VTEA+++ FG ++ V+V+ K Q L+ E
Sbjct: 36 PSVVVHVRGLVDGVTEADLVEALQEFGAISYVVVMPNKRQALVEYE 81
>gi|256080365|ref|XP_002576452.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|238661720|emb|CAZ32689.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 544
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
D +PS VIHIR +P E ++I + FG + ++ ++ K Q L+ +
Sbjct: 23 DLEPSPVIHIRELPEHTLELDLIRVFEQFGSIRDIAMIPHKGQALIEFD 71
>gi|407405096|gb|EKF30263.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 336
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
SRVIH+RNI VT+ I +L FG + ++++L+ NQ L+ +E+
Sbjct: 76 SRVIHMRNITPNVTQLSIQNLVQNFGNIKHIVMLRQMNQALVEMES 121
>gi|407844094|gb|EKG01787.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
SRVIH+RNI VT+ I +L FG + ++++L+ NQ L+ +E+
Sbjct: 76 SRVIHMRNITPNVTQLSIQNLVQNFGNIKHIVMLRQMNQALVEMES 121
>gi|324504331|gb|ADY41870.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 536
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAE 76
+PS V+H+RN+ + TEA+++ FG + V + GK L+ E E
Sbjct: 69 EPSVVVHVRNLSSTTTEADLLDALCFFGEIAYVRCIPGKGMALVEFEEE 117
>gi|159163530|pdb|1X4F|A Chain A, Solution Structure Of The Second Rrm Domain In Matrin 3
Length = 112
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 31 RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
RVIH+ N+P+ +++ ++ L P+G++ N ++++ K+Q + +E
Sbjct: 26 RVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEME 70
>gi|342183429|emb|CCC92909.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 320
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
SRVIH+RNI VT+ I +L FG + ++++L+ NQ L+ +E+
Sbjct: 84 SRVIHMRNITPNVTQLSIQNLVQNFGNIKHIVMLRQMNQALVEMES 129
>gi|327260974|ref|XP_003215307.1| PREDICTED: matrin-3-like [Anolis carolinensis]
Length = 883
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 31 RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
RVIH+ N+P+ +++ ++ L P+G+V N ++++ K+Q + +E
Sbjct: 487 RVIHLSNLPHSGYSDSAVLKLAEPYGKVKNYILMRMKSQAFIEME 531
>gi|431892605|gb|ELK03038.1| Matrin-3 [Pteropus alecto]
Length = 727
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 23 QKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++ K+Q + +E
Sbjct: 322 QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEME 376
>gi|111944|pir||A40016 matrin 3 - rat
Length = 845
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D +K D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-EKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|12643398|sp|P43244.2|MATR3_RAT RecName: Full=Matrin-3; AltName: Full=Nuclear scaffold protein
p130/MAT3
gi|2276402|gb|AAB63955.1| matrin 3 [Rattus norvegicus]
Length = 845
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D +K D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 473 KYKRIKKPEGKPD-EKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 531
Query: 66 KNQLLLHLE 74
K+Q + +E
Sbjct: 532 KSQAFIEME 540
>gi|47214762|emb|CAG01297.1| unnamed protein product [Tetraodon nigroviridis]
Length = 898
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 43 TEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE-AEIIHLGIPFGRVTNVLVLKGKNQVSL 101
TE ++I+LG+PFG+VTN ++++ +Q L + E + + ++T ++ K + +
Sbjct: 291 TENDVINLGLPFGKVTNYILMRSTHQAFLEMAYVEAAQAMVQYYQLTPAMINNQKLLIRM 350
Query: 102 ISGYRNRQ 109
Y+ Q
Sbjct: 351 SKRYKELQ 358
>gi|71409156|ref|XP_806939.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70870824|gb|EAN85088.1| RNA-binding protein, putative, partial [Trypanosoma cruzi]
Length = 165
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
SRVIH+RNI VT+ I +L FG + ++++L+ NQ L+ +E+
Sbjct: 76 SRVIHMRNITPNVTQLSIQNLVQNFGNIKHIVMLRQMNQALVEMES 121
>gi|357443611|ref|XP_003592083.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481131|gb|AES62334.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 407
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 28 KPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN--VLVLKGKNQLLLHLEAEIIHLGIPFG 85
P+++IH+ +P ++TE EI+ L G + N V + GK Q L+ E E
Sbjct: 327 SPTKMIHLSTLPQDITEDEIVTLLEEHGTIVNSKVFEMNGKKQGLVQFETE--------D 378
Query: 86 RVTNVLVLKGKNQVS 100
+ T LV K +S
Sbjct: 379 QATEALVCKHATSLS 393
>gi|390474376|ref|XP_002757685.2| PREDICTED: zinc finger protein 638 [Callithrix jacchus]
Length = 2078
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+Q KL +++S S V+ I +P + TE ++ L PFG+V +VL++ + + L +E
Sbjct: 761 LQRKLRKEQS-LHCSSVLLISELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME 819
Query: 75 AEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQS 110
+ I T L++KGKN + G + Q+
Sbjct: 820 FKEAVTAIMKHIETTPLMIKGKNVKICVPGKKKAQN 855
>gi|395508625|ref|XP_003758610.1| PREDICTED: zinc finger protein 638 [Sarcophilus harrisii]
Length = 2020
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
+A LD S F +H+ N+P + TE E++ +G+ FG+V + + +N+++L L++
Sbjct: 1005 EANLDTIHSHF-----VHLGNLPEDGYTEHEVVCVGLQFGKVDRYVFINNRNKVILQLDS 1059
>gi|154331968|ref|XP_001561801.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059121|emb|CAM41596.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 315
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
S VIH+RN+ EVT+ I +L FG + ++++L+ NQ L+ +++
Sbjct: 86 SSVIHMRNVTPEVTQLSIQNLAQNFGDIKHIVMLRQMNQALIEMKS 131
>gi|76363834|ref|XP_888628.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|12311843|emb|CAC22661.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 311
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
S VIH+RN+ EVT+ I +L FG + ++++L+ NQ L+ +++
Sbjct: 82 SSVIHMRNVTPEVTQLSIQNLAQNFGDIKHIVMLRQMNQALIEMKS 127
>gi|432090285|gb|ELK23718.1| Matrin-3 [Myotis davidii]
Length = 854
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 9 KYTLVMVVQAKLDRQKSDFKPS--RVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKG 65
KY + + K D QK D K RVIH+ N+P+ +++ ++ L P+G++ N ++++
Sbjct: 436 KYKRIKKPEGKPD-QKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM 494
Query: 66 KNQL 69
K+Q+
Sbjct: 495 KSQI 498
>gi|146076563|ref|XP_001462957.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|398009965|ref|XP_003858181.1| RNA-binding protein, putative [Leishmania donovani]
gi|134067038|emb|CAM65144.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|322496386|emb|CBZ31457.1| RNA-binding protein, putative [Leishmania donovani]
Length = 311
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
S VIH+RN+ EVT+ I +L FG + ++++L+ NQ L+ +++
Sbjct: 82 SSVIHMRNVTPEVTQLSIQNLAQNFGDIKHIVMLRQMNQALIEMKS 127
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLV 62
Q+K++ K+ F I+++N+ EVT+ E + L PFGR+T+ ++
Sbjct: 177 QSKIEEMKNQFTN---IYVKNVDPEVTQEEFVQLFEPFGRITSAVL 219
>gi|41055393|ref|NP_957393.1| heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|28278846|gb|AAH45336.1| Zgc:55429 [Danio rerio]
gi|182890552|gb|AAI64693.1| Zgc:55429 protein [Danio rerio]
Length = 536
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+R + + +TEA+++ FG ++ V+++ K Q L+ E
Sbjct: 39 PSLVVHVRGLIDGITEADLVEALQEFGTISYVVLMPKKRQALVEFE 84
>gi|417414052|gb|JAA53328.1| Putative titin, partial [Desmodus rotundus]
Length = 2035
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+Q KL + + + S V+ I +P + TE +II + PFG+V +VL++ + + L +E
Sbjct: 724 LQRKLRKDQPLYYGS-VLLISELPEDGYTEEDIIKIFQPFGKVNDVLIVPYRKEAYLKME 782
Query: 75 -AEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQS 110
E ++ + + T +LV KGKN + G + Q+
Sbjct: 783 FKEAVNAVMKYIETTPLLV-KGKNVKVCVPGKKKTQN 818
>gi|350854988|emb|CAZ32696.2| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 522
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE----AEIIHLG 81
+ PS V+H+R +P E +++ +GR+ +V ++ K Q L+ E AE +
Sbjct: 20 EIDPSPVVHVRGLPRHSVEFDVVKAFESYGRIRDVTMMPQKKQALVEFEDISSAEALIER 79
Query: 82 IPFGRVTNVLVLKGKNQVSLISGYRNRQSAA 112
P ++ N LV Q+S + Q AA
Sbjct: 80 NPEVKILNSLV-----QISFSTSKHIVQRAA 105
>gi|256080379|ref|XP_002576459.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 597
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 26 DFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE----AEIIHLG 81
+ PS V+H+R +P E +++ +GR+ +V ++ K Q L+ E AE +
Sbjct: 95 EIDPSPVVHVRGLPRHSVEFDVVKAFESYGRIRDVTMMPQKKQALVEFEDISSAEALIER 154
Query: 82 IPFGRVTNVLVLKGKNQVSLISGYRNRQSAA 112
P ++ N LV Q+S + Q AA
Sbjct: 155 NPEVKILNSLV-----QISFSTSKHIVQRAA 180
>gi|401414770|ref|XP_003871882.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488102|emb|CBZ23349.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 301
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
S VIH+RN+ EVT+ I +L FG + ++++L+ NQ L+ +++
Sbjct: 72 SSVIHMRNVTPEVTQLSIQNLAQNFGDIKHIVMLRQMNQALIEMKS 117
>gi|410955163|ref|XP_003984227.1| PREDICTED: zinc finger protein 638 [Felis catus]
Length = 1977
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+Q KL + +S S V+ I +P + TE EI + PFG+V +VL++ + + L +E
Sbjct: 658 LQRKLRKDQSSHYGS-VLLISELPEDGCTEEEIRKMFQPFGKVNDVLIVPYRKEAYLEME 716
Query: 75 AEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRN 107
+ + T L++KGKN + G +N
Sbjct: 717 FKEAVTAVMKYIETTPLLIKGKNVKICVPGKKN 749
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 27/35 (77%)
Query: 33 IHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKN 67
+++ NIP+ + +A+++ L +PFGR+T+ +V++ N
Sbjct: 522 LYVCNIPSSMNKAKLVELFLPFGRITHAMVVEQSN 556
>gi|254474227|ref|ZP_05087618.1| FAD dependent oxidoreductase [Pseudovibrio sp. JE062]
gi|211956757|gb|EEA91966.1| FAD dependent oxidoreductase [Pseudovibrio sp. JE062]
Length = 404
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 45 AEIIHLGI--PFGRVTNVLVLKGKNQLLLHLEAEIIHLGIPFGRVTNVLVLKGKNQVSLI 102
+E++H GI P + + ++GK L E G+P+ RV ++V ++QVS++
Sbjct: 47 SEVVHAGIYYPKDSLKSKACVQGKEMLYSFCE----EYGVPYKRVGKLIVATDESQVSML 102
Query: 103 SGYRNRQSA 111
G R R +A
Sbjct: 103 DGIRARAAA 111
>gi|449441199|ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Cucumis sativus]
Length = 408
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTN--VLVLKGKNQLLLHLEAEIIHLGIPFGR 86
P+++IHI ++ EVTE EI+ L G + N + + GK Q L+ + E +
Sbjct: 329 PTKMIHISSLSQEVTEEEIVSLLEEHGPIVNSKLFEMNGKKQALIMFDTE--------EQ 380
Query: 87 VTNVLVLKGKNQVSLISG 104
T LV K SL+SG
Sbjct: 381 ATEALVCK---HASLLSG 395
>gi|300121045|emb|CBK21427.2| unnamed protein product [Blastocystis hominis]
Length = 457
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 21 DRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKN 67
D +K+ + + + + NIP E+ EAEI PFG + + +LK KN
Sbjct: 237 DGEKTGYDIEKCVLMHNIPRELEEAEIHTFCEPFGGLKKIYMLKDKN 283
>gi|374332104|ref|YP_005082288.1| FAD-dependent oxidoreductase [Pseudovibrio sp. FO-BEG1]
gi|359344892|gb|AEV38266.1| FAD-dependent oxidoreductase [Pseudovibrio sp. FO-BEG1]
Length = 418
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 45 AEIIHLGI--PFGRVTNVLVLKGKNQLLLHLEAEIIHLGIPFGRVTNVLVLKGKNQVSLI 102
+E++H GI P + + ++GK L E G+P+ RV ++V ++QVS++
Sbjct: 61 SEVVHAGIYYPKDSLKSKACVQGKEMLYSFCE----EYGVPYKRVGKLIVATEESQVSML 116
Query: 103 SGYRNRQSA 111
G R R +A
Sbjct: 117 DGIRARAAA 125
>gi|112820307|gb|ABI24015.1| Rxr2 [Oikopleura dioica]
Length = 300
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 30 SRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIPFGRVTN 89
RV +++ NE+T A+I H + F +L GKN++L +A ++ I FGRV
Sbjct: 153 DRVYLVQSAWNEITIADIAHRSMEF----EDKLLIGKNEILTRGQATSTNVDIIFGRVIT 208
Query: 90 VLVLKGKN 97
LV K K
Sbjct: 209 ELVYKMKE 216
>gi|330789887|ref|XP_003283030.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
gi|325087102|gb|EGC40483.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
Length = 488
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEA 75
++ + D +PS V+H R +P +TE+++ L PFG++ V +L+ Q L+ +++
Sbjct: 27 LKTESDEIDRSIEPSPVVHCRGLPITITESDLHSLLSPFGKIQAVCMLR-MGQALIEMDS 85
>gi|409046171|gb|EKM55651.1| hypothetical protein PHACADRAFT_256428 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1287
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 5 GGNVKYTLVMVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLK 64
GGNV A +D Q P+R + I +IP+ T A I+ + PFG + + VL
Sbjct: 545 GGNVSKNASNAGLAGMDAQLQS-TPTRALWIGSIPSTTTPATILSVFSPFGPIESARVLT 603
Query: 65 GKNQLLLHLE 74
KN ++ E
Sbjct: 604 HKNCGFINFE 613
>gi|294461076|gb|ADE76105.1| unknown [Picea sitchensis]
Length = 218
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRV--TNVLVLKGKNQLLLHLEAE 76
P+++IH+ ++P +VTE EII P G V + + + GK Q L+ E E
Sbjct: 136 PTKMIHVSSLPPDVTEDEIISHLEPHGNVVDSKLFEVNGKKQALVLFENE 185
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 17 QAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLV 62
QAKLD QK F ++++NI E + E L PFG VT+ ++
Sbjct: 222 QAKLDEQKKQFTN---VYVKNIDPEANDDEFRELFTPFGNVTSAVL 264
>gi|440297145|gb|ELP89867.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
invadens IP1]
Length = 388
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGK 66
P+R + +R +P +V E E+ ++ FG V NV+ +K K
Sbjct: 106 PNRTVFVRGVPKDVEEGELKNIFWEFGDVKNVIFVKNK 143
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 35/61 (57%)
Query: 2 KDIGGNVKYTLVMVVQAKLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVL 61
KD+GGN++ + + ++ + ++ R I++ N+P + TE +++ L +G V +V
Sbjct: 938 KDLGGNLRLVVKISDPSQRQVRSGAYEEGREIYVCNLPYKTTEGDLVELFTAYGDVESVR 997
Query: 62 V 62
+
Sbjct: 998 I 998
>gi|149392187|gb|ABR25946.1| ab1 polypyrimidine tract-binding protein [Oryza sativa Indica
Group]
Length = 121
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLK--GKNQLLLHLEAE 76
P+++IHI +P E+TE I++ G V N + + GK Q L+ E+E
Sbjct: 42 PTKMIHISALPQEITEDAILNHVSEHGSVVNTKLFEVNGKRQALIQFESE 91
>gi|403260440|ref|XP_003922681.1| PREDICTED: zinc finger protein 638 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1960
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+Q KL +++S V+ I +P + TE ++ L PFG+V +VL++ + + L +E
Sbjct: 664 LQRKLRKEQS-LHCGSVLLISELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME 722
Query: 75 AEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQS 110
+ I T L +KGKN + G + Q+
Sbjct: 723 FKEAITAIMKHIETTPLTIKGKNVKICVPGKKKAQN 758
>gi|403260436|ref|XP_003922679.1| PREDICTED: zinc finger protein 638 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403260438|ref|XP_003922680.1| PREDICTED: zinc finger protein 638 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1981
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
+Q KL +++S V+ I +P + TE ++ L PFG+V +VL++ + + L +E
Sbjct: 664 LQRKLRKEQS-LHCGSVLLISELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME 722
Query: 75 AEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQS 110
+ I T L +KGKN + G + Q+
Sbjct: 723 FKEAITAIMKHIETTPLTIKGKNVKICVPGKKKAQN 758
>gi|442761301|gb|JAA72809.1| Putative polypyrimidine tract-binding protein, partial [Ixodes
ricinus]
Length = 161
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 51 GIPFGRVTNVLVLKGKNQLLLHLEAE 76
G FG+VTN+L+LKGKNQ + + E
Sbjct: 10 GTAFGKVTNLLMLKGKNQAFIEMNTE 35
>gi|392543132|ref|ZP_10290269.1| FAD-dependent oxidoreductase [Pseudoalteromonas piscicida JCM
20779]
Length = 361
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 14 MVVQAKLDRQKSDF---KPSRVIHIRNIPNEVTEAEIIHLGI--PFGRVTNVLVLKGKNQ 68
+ + AKL +S K SRV + N +E+IH GI P+G + + L ++GK
Sbjct: 16 LAIAAKLSHSRSVIVIDKESRVGEHTSSRN----SEVIHAGIYYPYGSLKHQLCVRGKAL 71
Query: 69 LLLHLEAEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQSA 111
L H E L IPF R+ +V + + + R A
Sbjct: 72 LYTHCE----QLNIPFHRLGKFIVATNAEEAQSLEQIKTRAHA 110
>gi|313230320|emb|CBY08024.1| unnamed protein product [Oikopleura dioica]
Length = 420
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 31 RVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLEAEIIHLGIPFGRVTNV 90
RV +++ NE+T A+I H + F +L GKN++L +A ++ I FGRV
Sbjct: 262 RVYLVQSAWNEITIADIAHRSMEF----EDKLLIGKNEILTRGQATSTNVDIIFGRVITE 317
Query: 91 LVLKGK 96
LV K K
Sbjct: 318 LVYKMK 323
>gi|440909326|gb|ELR59244.1| Zinc finger protein 638 [Bos grunniens mutus]
Length = 1967
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 16 VQAKLDR-QKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
+Q KL + Q S + P V+ I +P + TE EI + PFG+V +VL++ + + L +
Sbjct: 659 LQRKLRKDQSSHYGP--VLLISELPEDGCTEEEIRKIFQPFGKVNDVLIVPYRKEAYLEM 716
Query: 74 E-AEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQS 110
E E I + + T +L+ KGK+ + G + Q+
Sbjct: 717 EFKEAITAVMEYIETTPLLI-KGKSVKVCVPGKKKSQN 753
>gi|300794828|ref|NP_001179405.1| zinc finger protein 638 [Bos taurus]
Length = 1971
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 16 VQAKLDR-QKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHL 73
+Q KL + Q S + P V+ I +P + TE EI + PFG+V +VL++ + + L +
Sbjct: 659 LQRKLRKDQSSHYGP--VLLISELPEDGCTEEEIRKIFQPFGKVNDVLIVPYRKEAYLEM 716
Query: 74 E-AEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQS 110
E E I + + T +L+ KGK+ + G + Q+
Sbjct: 717 EFKEAITAVMEYIETTPLLI-KGKSVKVCVPGKKKSQN 753
>gi|348524683|ref|XP_003449852.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
2 [Oreochromis niloticus]
Length = 518
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+HIR + + V EA+++ FG ++ V+++ K Q L+ E
Sbjct: 39 PSPVVHIRGLVDGVMEADLVEALQEFGTISFVVMMPKKRQALVEYE 84
>gi|348524681|ref|XP_003449851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
1 [Oreochromis niloticus]
Length = 529
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+HIR + + V EA+++ FG ++ V+++ K Q L+ E
Sbjct: 39 PSPVVHIRGLVDGVMEADLVEALQEFGTISFVVMMPKKRQALVEYE 84
>gi|344283925|ref|XP_003413721.1| PREDICTED: zinc finger protein 638 [Loxodonta africana]
Length = 1968
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 16 VQAKLDRQKSDFKPSRVIHIRNIPNE-VTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
VQ KL R+ V+ + +P + TE +I + PFG+V++VL++ + + L +E
Sbjct: 653 VQRKL-RKDQSLNYGSVLVVSELPEDGCTEEDIRKVFQPFGKVSDVLIVPYRKEAYLKME 711
Query: 75 -AEIIHLGIPFGRVTNVLVLKGKNQVSLISGYRNRQS 110
E I + + T L++KGK+ + G + QS
Sbjct: 712 FKEAITAVMKYAE-TMPLLIKGKSVKVCVPGKKKSQS 747
>gi|402594034|gb|EJW87961.1| hypothetical protein WUBG_01127 [Wuchereria bancrofti]
Length = 608
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+RN+ + TEA+++ FG ++ + GK L+ E
Sbjct: 33 PSIVVHVRNLSPKATEADLLEALSHFGPISYATCMPGKRMALVEFE 78
>gi|324504296|gb|ADY41855.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 626
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+RN+ + TEA+++ FG ++ + GK L+ E
Sbjct: 23 PSIVVHVRNLSPKATEADLLEALSHFGPISYATCMPGKRMALVEFE 68
>gi|324503755|gb|ADY41626.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 614
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+RN+ + TEA+++ FG ++ + GK L+ E
Sbjct: 23 PSIVVHVRNLSPKATEADLLEALSHFGPISYATCMPGKRMALVEFE 68
>gi|170576159|ref|XP_001893522.1| RNA binding protein [Brugia malayi]
gi|158600425|gb|EDP37644.1| RNA binding protein, putative [Brugia malayi]
Length = 659
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+RN+ + TEA+++ FG ++ + GK L+ E
Sbjct: 33 PSIVVHVRNLSPKATEADLLEALSHFGPISYATCMPGKRMALVEFE 78
>gi|432895625|ref|XP_004076081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Oryzias latipes]
Length = 529
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+HIR + + V EA+++ FG ++ V+++ K Q L+ E
Sbjct: 39 PSPVVHIRGLVDGVMEADLVDALQEFGAISYVVMMPKKRQALVEYE 84
>gi|393907053|gb|EJD74501.1| serologically defined colon cancer antigen 1 [Loa loa]
Length = 1568
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+RN+ + TEA+++ FG ++ + GK L+ E
Sbjct: 961 PSIVVHVRNLSPKATEADLLEALSHFGPISYATCMPGKRMALVEFE 1006
>gi|170582502|ref|XP_001896158.1| hypothetical protein [Brugia malayi]
gi|158596691|gb|EDP34993.1| conserved hypothetical protein [Brugia malayi]
Length = 643
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLKGKNQLLLHLE 74
PS V+H+RN+ + TEA+++ FG ++ + GK L+ E
Sbjct: 448 PSIVVHVRNLSPKATEADLLEALSHFGPISYATCMPGKRMALVEFE 493
>gi|66820074|ref|XP_643683.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
gi|60471793|gb|EAL69748.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
Length = 695
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIP--FGRVTNVLVLKGKNQLLLHLEA 75
PS V+HIR+IP TE ++ + FG+ +V +L+ +Q LL +++
Sbjct: 14 PSAVLHIRSIPQGTTENDLFKITFDHKFGKCVSVRILERFHQALLEMDS 62
>gi|359480737|ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Vitis vinifera]
Length = 412
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 29 PSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLVLK--GKNQLLLHLEAEIIHLGIPFGR 86
P+++IH+ +P ++TE EI+ G + N + + GK Q L+ E E +
Sbjct: 333 PTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETE--------EQ 384
Query: 87 VTNVLVLKGKNQVSLISGYRNRQSAALMMII 117
T LV K SLI G R S + + I
Sbjct: 385 ATEALVCK---HASLIDGSTIRISFSQLQAI 412
>gi|156103277|ref|XP_001617331.1| polyadenylate-binding protein [Plasmodium vivax Sal-1]
gi|148806205|gb|EDL47604.1| polyadenylate-binding protein, putative [Plasmodium vivax]
Length = 883
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 KLDRQKSDFKPSRVIHIRNIPNEVTEAEIIHLGIPFGRVTNVLV 62
K +R +D K + ++++N P+ VTEA + L PFG +T+++V
Sbjct: 182 KSERATNDTKFTN-LYVKNFPDSVTEAHLKQLFSPFGEITSMIV 224
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.141 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,572,425,822
Number of Sequences: 23463169
Number of extensions: 55187465
Number of successful extensions: 123095
Number of sequences better than 100.0: 718
Number of HSP's better than 100.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 121272
Number of HSP's gapped (non-prelim): 1926
length of query: 118
length of database: 8,064,228,071
effective HSP length: 85
effective length of query: 33
effective length of database: 6,069,858,706
effective search space: 200305337298
effective search space used: 200305337298
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)