BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9172
(80 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322802943|gb|EFZ23084.1| hypothetical protein SINV_16070 [Solenopsis invicta]
Length = 114
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ 48
+++ Q A+ ++G +TQGGPNTVLRVI+EH+LYPITLD+LYQ
Sbjct: 68 NSNNQVAIAGQNQVSGAGETQGGPNTVLRVIVEHLLYPITLDILYQ 113
>gi|321470924|gb|EFX81898.1| hypothetical protein DAPPUDRAFT_302853 [Daphnia pulex]
Length = 540
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
GQT+TQGGPNTVLRVI+EHM+YP+TLDVL+Q
Sbjct: 156 GQTETQGGPNTVLRVIVEHMVYPVTLDVLFQI 187
>gi|242023546|ref|XP_002432193.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
gi|212517590|gb|EEB19455.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
Length = 513
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ 48
G DTQGGPNTVLRVIIEHM+YP+TLDVLY+
Sbjct: 127 GSIDTQGGPNTVLRVIIEHMVYPVTLDVLYK 157
>gi|328712476|ref|XP_003244820.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 581
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
GQ+D QGGPNTVLRVI+EHM++PI+LDVLY+
Sbjct: 152 GQSDVQGGPNTVLRVIVEHMVFPISLDVLYEI 183
>gi|328712478|ref|XP_001947870.2| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Acyrthosiphon pisum]
Length = 613
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
GQ+D QGGPNTVLRVI+EHM++PI+LDVLY+
Sbjct: 184 GQSDVQGGPNTVLRVIVEHMVFPISLDVLYEI 215
>gi|328712480|ref|XP_003244821.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 3
[Acyrthosiphon pisum]
Length = 632
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
GQ+D QGGPNTVLRVI+EHM++PI+LDVLY+
Sbjct: 184 GQSDVQGGPNTVLRVIVEHMVFPISLDVLYEI 215
>gi|307694571|gb|ADN84938.1| hephaestus [Biston betularia]
Length = 181
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 14 QALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
Q G T+ QGGPNTVLRVIIEHMLYPI LDVLY F Y
Sbjct: 129 QPANGGTEIQGGPNTVLRVIIEHMLYPIVLDVLYSIFQRY 168
>gi|345496639|ref|XP_001603240.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Nasonia
vitripennis]
Length = 587
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
Query: 2 NSASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
N+ S QAA Q ++TQGGPNTVLRVI+EH +YPI+LDVLYQ
Sbjct: 174 NNTSVQAA---GQGQVQGSETQGGPNTVLRVIVEHQIYPISLDVLYQI 218
>gi|357623431|gb|EHJ74585.1| putative polypyrimidine tract binding protein [Danaus plexippus]
Length = 621
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
Q D QGGPNTVLRVIIEHMLYPI LDVLY F Y
Sbjct: 234 QCDLQGGPNTVLRVIIEHMLYPIVLDVLYSIFQRY 268
>gi|328788959|ref|XP_625087.3| PREDICTED: polypyrimidine tract-binding protein 2 [Apis
mellifera]
Length = 449
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 1 MNSASAQAALQAA-QALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
+++++ Q AL Q Q +TQGGPNTVLRVI+E M+YPI+LDVLYQ
Sbjct: 6 LDNSNNQVALPGQNQVAQTQAETQGGPNTVLRVIVEQMVYPISLDVLYQI 55
>gi|198434994|ref|XP_002131704.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 2 [Ciona intestinalis]
Length = 495
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 2 NSASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAFST 60
N AQA LQA Q T+GGPN VLRV++E+MLYPITLDVL+ KFG T
Sbjct: 128 NQVKAQAVLQAMQ------QTEGGPNHVLRVVVENMLYPITLDVLHTIFT-KFGVVLKT 179
>gi|380018871|ref|XP_003693343.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Apis
florea]
Length = 578
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
Q +TQGGPNTVLRVI+E M+YPI+LDVLYQ
Sbjct: 180 QAETQGGPNTVLRVIVEQMVYPISLDVLYQI 210
>gi|198434992|ref|XP_002131695.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 1 [Ciona intestinalis]
Length = 528
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 2 NSASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAFST 60
N AQA LQA Q T+GGPN VLRV++E+MLYPITLDVL+ KFG T
Sbjct: 128 NQVKAQAVLQAMQ------QTEGGPNHVLRVVVENMLYPITLDVLHTIFT-KFGVVLKT 179
>gi|383854460|ref|XP_003702739.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Megachile
rotundata]
Length = 552
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
Q +TQGGPNTVLRVI+E M+YPI+LDVLYQ
Sbjct: 79 QAETQGGPNTVLRVIVEQMVYPISLDVLYQI 109
>gi|350418407|ref|XP_003491847.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
impatiens]
Length = 578
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
Q +TQGGPNTVLRVI+E M+YPI+LDVLYQ
Sbjct: 180 QAETQGGPNTVLRVIVEQMVYPISLDVLYQI 210
>gi|340726548|ref|XP_003401618.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
terrestris]
Length = 578
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
Q +TQGGPNTVLRVI+E M+YPI+LDVLYQ
Sbjct: 180 QAETQGGPNTVLRVIVEQMVYPISLDVLYQI 210
>gi|189241313|ref|XP_966484.2| PREDICTED: similar to polypyrimidine tract binding protein
[Tribolium castaneum]
Length = 822
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 13 AQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLY 47
A +T D QGGPNTVLRVIIEHM+YPI+LD+L+
Sbjct: 414 ATPVTNGQDIQGGPNTVLRVIIEHMIYPISLDILH 448
>gi|270013160|gb|EFA09608.1| hypothetical protein TcasGA2_TC011728 [Tribolium castaneum]
Length = 876
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 13 AQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLY 47
A +T D QGGPNTVLRVIIEHM+YPI+LD+L+
Sbjct: 468 ATPVTNGQDIQGGPNTVLRVIIEHMIYPISLDILH 502
>gi|312097472|ref|XP_003148986.1| hypothetical protein LOAG_13430 [Loa loa]
Length = 255
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 12 AAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
+A AL TQ PN+VLRVIIE+MLYP+TLDVLYQ F Y
Sbjct: 20 SASALDISACTQQQPNSVLRVIIENMLYPVTLDVLYQIFSRY 61
>gi|393904664|gb|EJD73763.1| polypyrimidine tract-binding protein 1 [Loa loa]
Length = 546
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 12 AAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
+A AL TQ PN+VLRVIIE+MLYP+TLDVLYQ F Y
Sbjct: 127 SASALDISACTQQQPNSVLRVIIENMLYPVTLDVLYQIFSRY 168
>gi|61403202|gb|AAH91854.1| Ptbp1b protein [Danio rerio]
Length = 586
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 9/62 (14%)
Query: 2 NSASAQAALQAAQALT------GQTDTQG--GPNTVLRVIIEHMLYPITLDVLYQFDNYK 53
N AQAALQA A+ G D G GP+ VLRVI+E++ YP+TLDVL+Q + K
Sbjct: 177 NQVRAQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLHQIFS-K 235
Query: 54 FG 55
FG
Sbjct: 236 FG 237
>gi|169790993|ref|NP_001116126.1| polypyrimidine tract binding protein-like [Danio rerio]
Length = 564
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 9/62 (14%)
Query: 2 NSASAQAALQAAQALT------GQTDTQG--GPNTVLRVIIEHMLYPITLDVLYQFDNYK 53
N AQAALQA A+ G D G GP+ VLRVI+E++ YP+TLDVL+Q + K
Sbjct: 155 NQVRAQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLHQIFS-K 213
Query: 54 FG 55
FG
Sbjct: 214 FG 215
>gi|28571965|ref|NP_788780.1| hephaestus, isoform H [Drosophila melanogaster]
gi|281362946|ref|NP_001163787.1| hephaestus, isoform O [Drosophila melanogaster]
gi|281362952|ref|NP_001163790.1| hephaestus, isoform R [Drosophila melanogaster]
gi|16303586|gb|AAL14775.1| hephaestus [Drosophila melanogaster]
gi|28381533|gb|AAO41627.1| hephaestus, isoform H [Drosophila melanogaster]
gi|157816746|gb|ABV82366.1| LD04329p [Drosophila melanogaster]
gi|272477264|gb|ACZ95080.1| hephaestus, isoform O [Drosophila melanogaster]
gi|272477267|gb|ACZ95083.1| hephaestus, isoform R [Drosophila melanogaster]
Length = 789
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 394 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 425
>gi|45552115|ref|NP_788776.2| hephaestus, isoform G [Drosophila melanogaster]
gi|45446737|gb|AAO41623.2| hephaestus, isoform G [Drosophila melanogaster]
Length = 615
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 220 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 251
>gi|386766857|ref|NP_001247399.1| hephaestus, isoform Y [Drosophila melanogaster]
gi|383293058|gb|AFH06716.1| hephaestus, isoform Y [Drosophila melanogaster]
Length = 898
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
G T+ GGPNTVLRVI+E ++YP++LD+L+Q F Y
Sbjct: 507 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQIFQRY 542
>gi|24651780|ref|NP_733460.1| hephaestus, isoform B [Drosophila melanogaster]
gi|28571963|ref|NP_733461.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28571967|ref|NP_788773.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28571969|ref|NP_788774.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28571971|ref|NP_788777.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28571973|ref|NP_788778.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28571975|ref|NP_788779.1| hephaestus, isoform K [Drosophila melanogaster]
gi|28571979|ref|NP_788775.1| hephaestus, isoform F [Drosophila melanogaster]
gi|161079548|ref|NP_001097994.1| hephaestus, isoform N [Drosophila melanogaster]
gi|281362948|ref|NP_001163788.1| hephaestus, isoform P [Drosophila melanogaster]
gi|281362960|ref|NP_001163794.1| hephaestus, isoform V [Drosophila melanogaster]
gi|18042167|gb|AAL57860.1|AF455053_1 hephaestus [Drosophila melanogaster]
gi|23172813|gb|AAF57208.2| hephaestus, isoform B [Drosophila melanogaster]
gi|28381525|gb|AAN14297.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28381526|gb|AAO41620.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28381527|gb|AAO41621.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28381528|gb|AAO41622.1| hephaestus, isoform F [Drosophila melanogaster]
gi|28381530|gb|AAO41624.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28381531|gb|AAO41625.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28381532|gb|AAO41626.1| hephaestus, isoform K [Drosophila melanogaster]
gi|158030462|gb|ABW08818.1| hephaestus, isoform N [Drosophila melanogaster]
gi|189182140|gb|ACD81846.1| LD11808p [Drosophila melanogaster]
gi|272477265|gb|ACZ95081.1| hephaestus, isoform P [Drosophila melanogaster]
gi|272477271|gb|ACZ95087.1| hephaestus, isoform V [Drosophila melanogaster]
Length = 608
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 213 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 244
>gi|17864284|ref|NP_524703.1| hephaestus, isoform C [Drosophila melanogaster]
gi|281362954|ref|NP_001163791.1| hephaestus, isoform S [Drosophila melanogaster]
gi|281362956|ref|NP_001163792.1| hephaestus, isoform T [Drosophila melanogaster]
gi|281362958|ref|NP_001163793.1| hephaestus, isoform U [Drosophila melanogaster]
gi|6665714|gb|AAF22979.1|AF211191_1 polypyrimidine tract binding protein [Drosophila melanogaster]
gi|23172814|gb|AAN14296.1| hephaestus, isoform C [Drosophila melanogaster]
gi|272477268|gb|ACZ95084.1| hephaestus, isoform S [Drosophila melanogaster]
gi|272477269|gb|ACZ95085.1| hephaestus, isoform T [Drosophila melanogaster]
gi|272477270|gb|ACZ95086.1| hephaestus, isoform U [Drosophila melanogaster]
Length = 581
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 186 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 217
>gi|386766855|ref|NP_001247398.1| hephaestus, isoform W [Drosophila melanogaster]
gi|383293057|gb|AFH06715.1| hephaestus, isoform W [Drosophila melanogaster]
Length = 799
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 408 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 439
>gi|161079544|ref|NP_001097993.1| hephaestus, isoform M [Drosophila melanogaster]
gi|16589094|gb|AAL27010.1|AF436844_1 hephaestus [Drosophila melanogaster]
gi|158030461|gb|ABW08817.1| hephaestus, isoform M [Drosophila melanogaster]
Length = 568
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 173 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 204
>gi|161079541|ref|NP_001097992.1| hephaestus, isoform L [Drosophila melanogaster]
gi|158030460|gb|ABW08816.1| hephaestus, isoform L [Drosophila melanogaster]
Length = 622
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 227 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 258
>gi|17861972|gb|AAL39463.1| LD03185p [Drosophila melanogaster]
Length = 571
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 213 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 244
>gi|281362950|ref|NP_001163789.1| hephaestus, isoform Q [Drosophila melanogaster]
gi|272477266|gb|ACZ95082.1| hephaestus, isoform Q [Drosophila melanogaster]
Length = 493
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 98 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 129
>gi|50261257|gb|AAT72299.1| polypyrimidine tract binding protein [Drosophila melanogaster]
Length = 493
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
G T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 98 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQI 129
>gi|170576691|ref|XP_001893730.1| hypothetical protein [Brugia malayi]
gi|158600096|gb|EDP37433.1| conserved hypothetical protein [Brugia malayi]
Length = 645
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
+A+ AA+ A+ AL TQ PN+VLRVIIE+MLYP+TLDVL+Q F Y
Sbjct: 391 TATGTAAISAS-ALDISACTQQQPNSVLRVIIENMLYPVTLDVLHQIFSRY 440
>gi|195505570|ref|XP_002099562.1| GE23291 [Drosophila yakuba]
gi|194185663|gb|EDW99274.1| GE23291 [Drosophila yakuba]
Length = 802
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 12 AAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
A A T++ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 405 AVSAAGNNTNSAGGPNTVLRVIVESLMYPVSLDILHQI 442
>gi|402588250|gb|EJW82183.1| hypothetical protein WUBG_06907, partial [Wuchereria bancrofti]
Length = 255
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
+A+ AA+ A+ AL TQ PN+VLRVIIE+MLYP+TLDVL+Q F Y
Sbjct: 12 TATGTAAISAS-ALDISACTQQQPNSVLRVIIENMLYPVTLDVLHQIFSRY 61
>gi|194904631|ref|XP_001981034.1| GG11844 [Drosophila erecta]
gi|190655672|gb|EDV52904.1| GG11844 [Drosophila erecta]
Length = 800
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 12 AAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
A A T++ GGPNTVLRVI+E ++YP++LD+L+Q F Y
Sbjct: 399 AVSAAGNNTNSAGGPNTVLRVIVESLMYPVSLDILHQIFQRY 440
>gi|195110769|ref|XP_001999952.1| GI22798 [Drosophila mojavensis]
gi|193916546|gb|EDW15413.1| GI22798 [Drosophila mojavensis]
Length = 834
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 13 AQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
A A + T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 434 ASAGSNNTNAAGGPNTVLRVIVETLMYPVSLDILHQI 470
>gi|194740822|ref|XP_001952889.1| GF17502 [Drosophila ananassae]
gi|190625948|gb|EDV41472.1| GF17502 [Drosophila ananassae]
Length = 835
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 8 AALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
A LQ + +++ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 392 AILQNNTSAGNNSNSAGGPNTVLRVIVESLMYPVSLDILHQI 433
>gi|291227384|ref|XP_002733659.1| PREDICTED: polypyrimidine tract-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 558
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%), Gaps = 1/35 (2%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
DT GG NTVLRVI+E+MLYP+T+D+L+Q + KFG
Sbjct: 180 DTLGGQNTVLRVIVENMLYPVTVDILHQIFS-KFG 213
>gi|195391604|ref|XP_002054450.1| GJ22800 [Drosophila virilis]
gi|194152536|gb|EDW67970.1| GJ22800 [Drosophila virilis]
Length = 818
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 13 AQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
A A T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 418 ASAAGNNTNAAGGPNTVLRVIVETLMYPVSLDILHQI 454
>gi|195055925|ref|XP_001994863.1| GH17472 [Drosophila grimshawi]
gi|193892626|gb|EDV91492.1| GH17472 [Drosophila grimshawi]
Length = 920
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 13 AQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
A A T+ GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 524 ASAAGNNTNAAGGPNTVLRVIVETLMYPVSLDILHQI 560
>gi|327263703|ref|XP_003216657.1| PREDICTED: regulator of differentiation 1-like [Anolis
carolinensis]
Length = 558
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 12/65 (18%)
Query: 2 NSASAQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFD 50
N A QAALQA A LTG T+GG ++VLR+I+E++ YP+TL+VLYQ
Sbjct: 149 NQARTQAALQAVSAVQSGGLALTGAPATEGGLPPGQSSVLRIIVENLFYPVTLEVLYQIF 208
Query: 51 NYKFG 55
+ KFG
Sbjct: 209 S-KFG 212
>gi|198435860|ref|XP_002127727.1| PREDICTED: similar to polypyrimidine tract binding protein 1 [Ciona
intestinalis]
Length = 516
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 2 NSASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
N QA L+A Q GGPN VLR +IE+MLYPITLDVL+ + KFG
Sbjct: 126 NQLKTQAILEAMQK------RDGGPNHVLRAVIENMLYPITLDVLHTIFS-KFG 172
>gi|324504709|gb|ADY42030.1| Regulator of differentiation 1 [Ascaris suum]
Length = 560
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
Query: 22 TQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
TQ PN+VLRVIIE+MLYP+TLDVL+Q F Y
Sbjct: 148 TQQQPNSVLRVIIENMLYPVTLDVLHQIFSRY 179
>gi|340375863|ref|XP_003386453.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Amphimedon
queenslandica]
Length = 476
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 26/28 (92%)
Query: 22 TQGGPNTVLRVIIEHMLYPITLDVLYQF 49
+QG PN++LRVIIE+M+YPIT+DVL+Q
Sbjct: 124 SQGQPNSILRVIIENMIYPITIDVLHQI 151
>gi|195354540|ref|XP_002043755.1| GM16408 [Drosophila sechellia]
gi|194128955|gb|EDW50998.1| GM16408 [Drosophila sechellia]
Length = 792
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 15 ALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
A+ + GGPNTVLRVI+E ++YP++LDVL+Q
Sbjct: 394 AVNAGGNAAGGPNTVLRVIVESLMYPVSLDVLHQI 428
>gi|195575404|ref|XP_002105669.1| GD16206 [Drosophila simulans]
gi|194201596|gb|EDX15172.1| GD16206 [Drosophila simulans]
Length = 792
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 15 ALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
A+ + GGPNTVLRVI+E ++YP++LDVL+Q
Sbjct: 394 AVNAGGNAAGGPNTVLRVIVESLMYPVSLDVLHQI 428
>gi|195446082|ref|XP_002070619.1| GK10936 [Drosophila willistoni]
gi|194166704|gb|EDW81605.1| GK10936 [Drosophila willistoni]
Length = 629
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 24/26 (92%)
Query: 24 GGPNTVLRVIIEHMLYPITLDVLYQF 49
GGPNTVLRVI+E ++YP++LD+L+Q
Sbjct: 189 GGPNTVLRVIVESLMYPVSLDILHQI 214
>gi|432936644|ref|XP_004082208.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oryzias
latipes]
Length = 577
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 14/67 (20%)
Query: 2 NSASAQAALQAAQALTG----------QTDTQGGP---NTVLRVIIEHMLYPITLDVLYQ 48
N AQAALQA AL G + + GG + VLRVI+E++ YP+TLDVL+Q
Sbjct: 157 NQVRAQAALQAVNALHGSGMGSMAISAEAASMGGAASQSPVLRVIVENLFYPVTLDVLHQ 216
Query: 49 FDNYKFG 55
+ KFG
Sbjct: 217 IFS-KFG 222
>gi|170042024|ref|XP_001848742.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167865565|gb|EDS28948.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 572
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQF 49
PNTVLRVI+E +LYP++LD+LYQ
Sbjct: 148 PNTVLRVIVESLLYPVSLDILYQI 171
>gi|170028938|ref|XP_001842351.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167879401|gb|EDS42784.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 535
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQF 49
PNTVLRVI+E +LYP++LD+LYQ
Sbjct: 147 PNTVLRVIVESLLYPVSLDILYQI 170
>gi|25146814|ref|NP_741042.1| Protein PTB-1, isoform b [Caenorhabditis elegans]
gi|20338919|emb|CAD30435.1| Protein PTB-1, isoform b [Caenorhabditis elegans]
Length = 453
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
+ TQ PN+VLR IIE+M++P++LDVLYQ
Sbjct: 59 EVGTQQQPNSVLRTIIENMMFPVSLDVLYQL 89
>gi|25146811|ref|NP_741041.1| Protein PTB-1, isoform a [Caenorhabditis elegans]
gi|20338920|emb|CAA85411.3| Protein PTB-1, isoform a [Caenorhabditis elegans]
Length = 615
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
+ TQ PN+VLR IIE+M++P++LDVLYQ
Sbjct: 221 EVGTQQQPNSVLRTIIENMMFPVSLDVLYQL 251
>gi|157137151|ref|XP_001663911.1| polypyrimidine tract binding protein [Aedes aegypti]
gi|108869791|gb|EAT34016.1| AAEL013723-PA [Aedes aegypti]
Length = 539
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQF 49
PNTVLRVI+E +LYP++LD+LYQ
Sbjct: 150 PNTVLRVIVESLLYPVSLDILYQI 173
>gi|348522752|ref|XP_003448888.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 654
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 2 NSASAQAALQAAQALTGQTDTQG-GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
N AQAAL+A + DT P+TVLRV++E+++YP+TLD L Q + KFG
Sbjct: 260 NQERAQAALRALS--SSHVDTAAVAPSTVLRVVVENLIYPVTLDALCQIFS-KFG 311
>gi|392341647|ref|XP_003754390.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
gi|392349693|ref|XP_003750446.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
Length = 558
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 14/67 (20%)
Query: 2 NSASAQAALQAAQAL----------TGQTDTQ---GGPNTVLRVIIEHMLYPITLDVLYQ 48
N A QAALQA ++ T D + G ++VLR+I+E++ YP+TLDVL+Q
Sbjct: 142 NQARVQAALQAVNSIQSGNLASAASTAAVDAKMVMAGQSSVLRIIVENLFYPVTLDVLHQ 201
Query: 49 FDNYKFG 55
+ KFG
Sbjct: 202 IFS-KFG 207
>gi|338720441|ref|XP_003364168.1| PREDICTED: regulator of differentiation 1 isoform 2 [Equus
caballus]
Length = 457
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 12/65 (18%)
Query: 2 NSASAQAALQAAQA-------LTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFD 50
N A QAALQA A L G +G G + VLR+IIE++ YP+TL+VL+Q
Sbjct: 48 NQARVQAALQAVSAVQSGSLALPGAPTNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIF 107
Query: 51 NYKFG 55
+ KFG
Sbjct: 108 S-KFG 111
>gi|338720439|ref|XP_001490810.2| PREDICTED: regulator of differentiation 1 isoform 1 [Equus
caballus]
Length = 523
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 12/65 (18%)
Query: 2 NSASAQAALQAAQA-------LTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFD 50
N A QAALQA A L G +G G + VLR+IIE++ YP+TL+VL+Q
Sbjct: 114 NQARVQAALQAVSAVQSGSLALPGAPTNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIF 173
Query: 51 NYKFG 55
+ KFG
Sbjct: 174 S-KFG 177
>gi|66472746|ref|NP_001018313.1| polypyrimidine tract binding protein 1a [Danio rerio]
gi|63100731|gb|AAH95372.1| Polypyrimidine tract binding protein 1a [Danio rerio]
Length = 574
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 9/62 (14%)
Query: 2 NSASAQAALQAAQAL-TGQTDT-------QGGPNTVLRVIIEHMLYPITLDVLYQFDNYK 53
N AQAALQA A+ TG G + VLRVI+E++ YP+TLDVL+Q + K
Sbjct: 158 NQVRAQAALQAVNAVQTGGMSLAAIDGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFS-K 216
Query: 54 FG 55
FG
Sbjct: 217 FG 218
>gi|312378791|gb|EFR25262.1| hypothetical protein AND_09562 [Anopheles darlingi]
Length = 399
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQF 49
PNTVLRVI+E +LYP++LDVL+Q
Sbjct: 161 PNTVLRVIVESLLYPVSLDVLHQI 184
>gi|347970969|ref|XP_318405.4| AGAP003945-PA [Anopheles gambiae str. PEST]
gi|333469570|gb|EAA13599.5| AGAP003945-PA [Anopheles gambiae str. PEST]
Length = 601
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQF 49
PNTVLRVI+E +LYP++LDVL+Q
Sbjct: 212 PNTVLRVIVESLLYPVSLDVLHQI 235
>gi|426216016|ref|XP_004002265.1| PREDICTED: polypyrimidine tract-binding protein 2 [Ovis aries]
Length = 510
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 12/66 (18%)
Query: 1 MNSASAQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQF 49
+N A AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q
Sbjct: 114 LNQARAQAVLQAVTAVQTASTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQI 173
Query: 50 DNYKFG 55
+ KFG
Sbjct: 174 FS-KFG 178
>gi|348531446|ref|XP_003453220.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 523
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 6 AQAALQAAQAL---------TGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AQA LQA A+ G D P+ VLR+II++M YP+TLDVL Q + KFG
Sbjct: 132 AQAVLQAVSAVQDGSSPSSDPGVLDLTPPPSPVLRIIIDNMFYPVTLDVLQQIFS-KFG 189
>gi|115441273|ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|113534447|dbj|BAF06830.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|215697244|dbj|BAG91238.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 439
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ Q PN +L V I HMLYPIT++VL+Q F Y F
Sbjct: 74 SSHQELTTDQSSHGRNPDQEEPNRILLVTIHHMLYPITIEVLHQVFSPYGF 124
>gi|218189437|gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indica Group]
Length = 443
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ Q PN +L V I HMLYPIT++VL+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNPDQEEPNRILLVTIHHMLYPITIEVLHQVFSPYGF 128
>gi|341888906|gb|EGT44841.1| CBN-PTB-1 protein [Caenorhabditis brenneri]
Length = 509
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
+ TQ PN+VLR IIE+M++P++LDVL+Q
Sbjct: 115 EVGTQQQPNSVLRTIIENMMFPVSLDVLHQL 145
>gi|345777899|ref|XP_538790.3| PREDICTED: regulator of differentiation 1 [Canis lupus familiaris]
Length = 610
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 12/63 (19%)
Query: 4 ASAQAALQAAQA-------LTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNY 52
+ AQAALQA A L G +G G + VLR+IIE++ YP+TL+VL+Q +
Sbjct: 203 SRAQAALQAVSAVQSGSLALPGAPTNEGTILPGQSPVLRIIIENLFYPVTLEVLHQIFS- 261
Query: 53 KFG 55
KFG
Sbjct: 262 KFG 264
>gi|363744882|ref|XP_424912.3| PREDICTED: regulator of differentiation 1 [Gallus gallus]
Length = 552
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 12/63 (19%)
Query: 4 ASAQAALQAAQAL----TGQTDT-------QGGPNTVLRVIIEHMLYPITLDVLYQFDNY 52
ASAQAALQ + G T T G ++VLR+IIE++ YP++L+VLYQ +
Sbjct: 163 ASAQAALQVVNTVQCGNVGVTSTFAAESGLPPGHSSVLRIIIENLFYPVSLEVLYQIFS- 221
Query: 53 KFG 55
KFG
Sbjct: 222 KFG 224
>gi|390178277|ref|XP_003736615.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859388|gb|EIM52688.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 572
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 22/24 (91%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQF 49
PNTVLRVI+E ++YP++LD+L+Q
Sbjct: 185 PNTVLRVIVESLMYPVSLDILHQI 208
>gi|198452628|ref|XP_001358876.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132005|gb|EAL28019.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 22/24 (91%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQF 49
PNTVLRVI+E ++YP++LD+L+Q
Sbjct: 398 PNTVLRVIVESLMYPVSLDILHQI 421
>gi|348510807|ref|XP_003442936.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 575
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Query: 2 NSASAQAALQAAQALTG--------------QTDTQGGPNTVLRVIIEHMLYPITLDVLY 47
N AQAALQA AL G + VLRVI+E++ YP+TLDVL+
Sbjct: 156 NQVRAQAALQAVNALHGGGMGSVAISADAGSMAGAAAAQSPVLRVIVENLFYPVTLDVLH 215
Query: 48 QFDNYKFG 55
Q + KFG
Sbjct: 216 QIFS-KFG 222
>gi|413949171|gb|AFW81820.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 529
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQTDTQGG-PNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ QG PN +L V I HM+YPIT+++L+Q F Y F
Sbjct: 163 SSHQELTTDQSSHGRNSDQGSEPNRILLVTIHHMIYPITVEILHQVFKAYGF 214
>gi|125827109|ref|XP_001335967.1| PREDICTED: regulator of differentiation 1 [Danio rerio]
Length = 522
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 13/66 (19%)
Query: 2 NSASAQAALQAAQAL-TGQTDTQG-----------GPNTVLRVIIEHMLYPITLDVLYQF 49
N AQAALQA A+ TG G G + VLR+I+E++ YP++L+VL+Q
Sbjct: 113 NQGRAQAALQAVNAVHTGNMSLSGTATASDGGMMPGQSPVLRIIVENLYYPVSLEVLHQI 172
Query: 50 DNYKFG 55
+ KFG
Sbjct: 173 FS-KFG 177
>gi|241997960|ref|XP_002433623.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
gi|215495382|gb|EEC05023.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
Length = 512
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%), Gaps = 2/37 (5%)
Query: 11 QAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLY 47
Q AQA Q ++ GG NTVLRV++++ +YP++LD+L+
Sbjct: 157 QVAQA--NQGESPGGSNTVLRVVVDNQIYPVSLDLLH 191
>gi|413949172|gb|AFW81821.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 339
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQTDTQGG-PNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ QG PN +L V I HM+YPIT+++L+Q F Y F
Sbjct: 163 SSHQELTTDQSSHGRNSDQGSEPNRILLVTIHHMIYPITVEILHQVFKAYGF 214
>gi|348505292|ref|XP_003440195.1| PREDICTED: regulator of differentiation 1 [Oreochromis niloticus]
Length = 514
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 11/65 (16%)
Query: 1 MNSASAQAALQAAQA-------LTGQTDTQG---GPNTVLRVIIEHMLYPITLDVLYQFD 50
M S AQAALQA A +T + +G G + VLR+I+E++ YP+TL+VL Q
Sbjct: 124 MTSQRAQAALQAINAGAVHSGNMTSGGEGRGIAPGQSPVLRIIVENLFYPVTLEVLQQIF 183
Query: 51 NYKFG 55
+ KFG
Sbjct: 184 S-KFG 187
>gi|213513374|ref|NP_001133504.1| polypyrimidine tract-binding protein 2 [Salmo salar]
gi|209154262|gb|ACI33363.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 520
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 9/58 (15%)
Query: 6 AQAALQAAQALTGQ-TDTQG-------GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AQA LQA A+ G T T G + VLR+II++M YP+TLDVL Q + KFG
Sbjct: 144 AQAVLQAVSAVQGGGTPTSGSDLALTAASSPVLRIIIDNMFYPVTLDVLQQIFS-KFG 200
>gi|293335567|ref|NP_001169470.1| uncharacterized protein LOC100383343 [Zea mays]
gi|224029557|gb|ACN33854.1| unknown [Zea mays]
Length = 444
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQTDTQGG-PNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ QG PN +L V I HM+YPIT+++L+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNSDQGSEPNRILLVTIHHMIYPITVEILHQVFKAYGF 129
>gi|427789193|gb|JAA60048.1| Putative hephaestus [Rhipicephalus pulchellus]
Length = 559
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 15 ALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
AL Q GG NTVLRV++++ +YP+TLD+L+
Sbjct: 176 ALANQGGEGGGANTVLRVVVDNQIYPVTLDLLHSI 210
>gi|432915659|ref|XP_004079197.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 523
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 6 AQAALQAAQAL---------TGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AQA LQA A+ G + P+ VLR+II++M YP+TLDVL Q + KFG
Sbjct: 132 AQAVLQAVSAVQDGSSPSSDPGVLELAPPPSPVLRIIIDNMFYPVTLDVLQQIFS-KFG 189
>gi|427796833|gb|JAA63868.1| Putative hephaestus, partial [Rhipicephalus pulchellus]
Length = 554
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 15 ALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
AL Q GG NTVLRV++++ +YP+TLD+L+
Sbjct: 171 ALANQGGEGGGANTVLRVVVDNQIYPVTLDLLHSI 205
>gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|145324166|ref|NP_001077672.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|75323651|sp|Q6ICX4.1|PTBP3_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 3
gi|48525347|gb|AAT44975.1| At1g43190 [Arabidopsis thaliana]
gi|50198952|gb|AAT70479.1| At1g43190 [Arabidopsis thaliana]
gi|110737368|dbj|BAF00629.1| hypothetical protein [Arabidopsis thaliana]
gi|332193840|gb|AEE31961.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193841|gb|AEE31962.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 432
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 4 ASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
+S Q Q + G+ D PN +L V I HMLYPIT+DVL+Q F Y F
Sbjct: 78 SSHQELTTIEQNIHGREDE---PNRILLVTIHHMLYPITVDVLHQVFSPYGF 126
>gi|297852124|ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339785|gb|EFH70202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 432
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 4 ASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
+S Q Q + G+ D PN +L V I HMLYPIT+DVL+Q F Y F
Sbjct: 78 SSHQELTTIEQNIHGREDE---PNRILLVTIHHMLYPITVDVLHQVFSPYGF 126
>gi|410897873|ref|XP_003962423.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Takifugu rubripes]
Length = 577
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 2 NSASAQAALQAAQALTG--------QTDTQ-----GGPNTVLRVIIEHMLYPITLDVLYQ 48
N AQAALQA AL G TD + VLRVI+E++ YP+TL+VL+Q
Sbjct: 158 NQVRAQAALQAVNALHGGGMGGMAIPTDPASIAGAAAQSPVLRVIVENLFYPVTLEVLHQ 217
Query: 49 FDNYKFG 55
+ KFG
Sbjct: 218 IFS-KFG 223
>gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193842|gb|AEE31963.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 430
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 4 ASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
+S Q Q + G+ D PN +L V I HMLYPIT+DVL+Q F Y F
Sbjct: 76 SSHQELTTIEQNIHGREDE---PNRILLVTIHHMLYPITVDVLHQVFSPYGF 124
>gi|410897871|ref|XP_003962422.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Takifugu rubripes]
Length = 575
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 2 NSASAQAALQAAQALTG--------QTDTQ-----GGPNTVLRVIIEHMLYPITLDVLYQ 48
N AQAALQA AL G TD + VLRVI+E++ YP+TL+VL+Q
Sbjct: 156 NQVRAQAALQAVNALHGGGMGGMAIPTDPASIAGAAAQSPVLRVIVENLFYPVTLEVLHQ 215
Query: 49 FDNYKFG 55
+ KFG
Sbjct: 216 IFS-KFG 221
>gi|449273011|gb|EMC82640.1| Polypyrimidine tract-binding protein 1, partial [Columba livia]
Length = 525
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 8/51 (15%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
++ AA+ A A+ GQ+ VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 135 ASPAAVDAGMAMAGQS-------PVLRIIVENLFYPVTLDVLHQIFS-KFG 177
>gi|300681488|emb|CBH32582.1| RNA recognition domain containing protein,expressed [Triticum
aestivum]
Length = 439
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ Q PN +L V + HMLYP+T++VL+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNPDQDEPNRILLVTVHHMLYPMTVEVLHQVFSPYGF 128
>gi|308509766|ref|XP_003117066.1| CRE-PTB-1 protein [Caenorhabditis remanei]
gi|308241980|gb|EFO85932.1| CRE-PTB-1 protein [Caenorhabditis remanei]
Length = 436
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
+ TQ PN+VLR IIE+M++P++L+VL+Q
Sbjct: 41 EVGTQQQPNSVLRTIIENMMFPVSLEVLHQL 71
>gi|118404352|ref|NP_001072479.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
gi|112418598|gb|AAI21904.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
Length = 531
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQAL----TGQTDTQGGPNTV-------LRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A+ + T T NTV LR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTSNSSVTSTAANENTVSSAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|357126039|ref|XP_003564696.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 443
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ Q PN +L V + HMLYP+T++VL+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNPDQDEPNRILLVTVHHMLYPMTVEVLHQVFSPYGF 128
>gi|300681487|emb|CBH32581.1| RNA recognition domain containing protein [Triticum aestivum]
Length = 277
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ Q PN +L V + HMLYP+T++VL+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNPDQDEPNRILLVTVHHMLYPMTVEVLHQVFSPYGF 128
>gi|268532214|ref|XP_002631235.1| C. briggsae CBR-PTB-1 protein [Caenorhabditis briggsae]
Length = 610
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
+ TQ PN+VLR IIE+M++P++L+VL+Q
Sbjct: 218 EVGTQQQPNSVLRTIIENMMFPVSLEVLHQL 248
>gi|363814551|ref|NP_001242751.1| uncharacterized protein LOC100819672 [Glycine max]
gi|255639782|gb|ACU20184.1| unknown [Glycine max]
Length = 431
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 14 QALTGQTDTQGG---PNTVLRVIIEHMLYPITLDVLYQ 48
Q LT +QG PN +L V + HMLYP+T+DVLYQ
Sbjct: 81 QELTTMEQSQGRGDEPNRILLVTVHHMLYPMTVDVLYQ 118
>gi|356535770|ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 443
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 14 QALTGQTDTQGG---PNTVLRVIIEHMLYPITLDVLYQ 48
Q LT +QG PN +L V + HMLYP+T+DVLYQ
Sbjct: 81 QELTTMDQSQGRGDEPNRILLVTVHHMLYPMTVDVLYQ 118
>gi|443711043|gb|ELU04990.1| hypothetical protein CAPTEDRAFT_200421 [Capitella teleta]
Length = 524
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 20/21 (95%)
Query: 26 PNTVLRVIIEHMLYPITLDVL 46
P TVLRVI+E+MLYP+T+DVL
Sbjct: 136 PKTVLRVIVENMLYPVTIDVL 156
>gi|293335109|ref|NP_001169809.1| uncharacterized protein LOC100383701 [Zea mays]
gi|224031787|gb|ACN34969.1| unknown [Zea mays]
Length = 397
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQ-TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ +D + PN +L V I HM+YPIT++VL+Q F Y F
Sbjct: 31 SSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGF 82
>gi|413933764|gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945515|gb|AFW78164.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQ-TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ +D + PN +L V I HM+YPIT++VL+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGF 129
>gi|413933763|gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 445
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQ-TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ +D + PN +L V I HM+YPIT++VL+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGF 129
>gi|157838029|ref|NP_001093477.1| polypyrimidine tract-binding protein 2 [Danio rerio]
Length = 538
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Query: 6 AQAALQAAQA----------LTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AQA LQA A + ++ P+ VLR+II++M YP+TLDVL Q + KFG
Sbjct: 141 AQAVLQAVSAVQEGGSPSSDMASKSVLTPAPSPVLRIIIDNMFYPVTLDVLQQIFS-KFG 199
>gi|395745998|ref|XP_003778369.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pongo abelii]
Length = 551
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 8/48 (16%)
Query: 8 AALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AA+ A A+ GQ+ VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 169 AAVDAGMAMAGQS-------PVLRIIVENLFYPMTLDVLHQIFS-KFG 208
>gi|413945516|gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQ-TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ +D + PN +L V I HM+YPIT++VL+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGF 129
>gi|242090663|ref|XP_002441164.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
gi|241946449|gb|EES19594.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
Length = 444
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQ-TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ +D + PN +L V I HM+YPIT++VL+Q F Y F
Sbjct: 78 SSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGF 129
>gi|413933762|gb|AFW68313.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 251
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQ-TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ +D + PN +L V I HM+YPIT++VL+Q F Y F
Sbjct: 80 SSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGF 131
>gi|345330029|ref|XP_003431460.1| PREDICTED: regulator of differentiation 1-like [Ornithorhynchus
anatinus]
Length = 670
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 10 LQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
L AA A G + G ++VLR+I+E++ YP+TL+VLYQ +KFG
Sbjct: 163 LTAAPA--GDSGLLPGQSSVLRIIVENLFYPVTLEVLYQIF-FKFG 205
>gi|351706875|gb|EHB09794.1| Polypyrimidine tract-binding protein 1 [Heterocephalus glaber]
Length = 543
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 14/67 (20%)
Query: 2 NSASAQAALQAAQALTGQTDTQ-------------GGPNTVLRVIIEHMLYPITLDVLYQ 48
N A AQAALQ ++ G + VLR+I+E++ YP+TLDVL+Q
Sbjct: 143 NQARAQAALQTVNSVQSGNLALAASVAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQ 202
Query: 49 FDNYKFG 55
+ KFG
Sbjct: 203 IFS-KFG 208
>gi|359480737|ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Vitis vinifera]
Length = 412
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 11 QAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ 48
Q +Q G D Q PN +L V I H+LYPIT++VL+Q
Sbjct: 52 QNSQGRKGDQDAQ--PNRILLVTIHHLLYPITVEVLHQ 87
>gi|223647466|gb|ACN10491.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 540
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQALT--GQTDTQG---------GPNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A+ G ++ P+ VLR+II++M YP+TLDVL Q + KF
Sbjct: 139 AQAVLQAVSAVQDGGSPNSDNSTLDSVLAHAPSPVLRIIIDNMFYPVTLDVLQQIFS-KF 197
Query: 55 G 55
G
Sbjct: 198 G 198
>gi|417411514|gb|JAA52191.1| Putative polypyrimidine tract-binding protein, partial [Desmodus
rotundus]
Length = 541
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
SA L ALT + G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 144 SAVQSGNLALPGALTNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 195
>gi|355558193|gb|EHH14973.1| hypothetical protein EGK_00996, partial [Macaca mulatta]
Length = 529
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
Query: 1 MNSASAQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQF 49
+N AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q
Sbjct: 138 INFQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQI 197
Query: 50 DNYKFG 55
+ KFG
Sbjct: 198 FS-KFG 202
>gi|131529|sp|P17225.2|PTBP1_MOUSE RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|53553|emb|CAA36321.1| 25kDa nuclear protein [Mus musculus]
Length = 527
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 2 NSASAQAALQAAQAL-TGQTDTQ------------GGPNTVLRVIIEHMLYPITLDVLYQ 48
N AQAALQA ++ +G G + VLR+I+E++ YP+TLDVL+Q
Sbjct: 142 NQVRAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQ 201
Query: 49 FDNYKFG 55
+ KFG
Sbjct: 202 IFS-KFG 207
>gi|359480735|ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Vitis vinifera]
Length = 448
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 11 QAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ 48
Q +Q G D Q PN +L V I H+LYPIT++VL+Q
Sbjct: 88 QNSQGRKGDQDAQ--PNRILLVTIHHLLYPITVEVLHQ 123
>gi|148224882|ref|NP_001080169.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|28278766|gb|AAH45068.1| Ptbp1 protein [Xenopus laevis]
Length = 547
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 9/53 (16%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
SASA A + A+ A++GQ+ VLR+I+E++ YP+TLDVL Q + KFG
Sbjct: 162 SASA-AVVDASIAMSGQS-------PVLRIIVENLFYPVTLDVLQQIFS-KFG 205
>gi|345323919|ref|XP_001506947.2| PREDICTED: polypyrimidine tract-binding protein 1 [Ornithorhynchus
anatinus]
Length = 707
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 9/53 (16%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
SASA AA+ A A+ G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 315 SASA-AAVDAGMAIAGLS-------PVLRIIVENLFYPVTLDVLHQIFS-KFG 358
>gi|357443611|ref|XP_003592083.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481131|gb|AES62334.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 407
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 14 QALTGQTDTQGG---PNTVLRVIIEHMLYPITLDVLYQ 48
Q LT +QG PN +L V I H+LYPIT+DVLYQ
Sbjct: 45 QELTTIDQSQGRGDEPNRILLVTIHHVLYPITVDVLYQ 82
>gi|147856398|emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
Length = 476
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 11 QAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ 48
Q +Q G D Q PN +L V I H+LYPIT++VL+Q
Sbjct: 88 QNSQGRKGDQDAQ--PNRILLVTIHHLLYPITVEVLHQ 123
>gi|397507212|ref|XP_003824099.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pan paniscus]
Length = 541
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 8/51 (15%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+ +AA+ A + GQ+ VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 166 APEAAVDAGMGMAGQS-------PVLRIIVENLFYPMTLDVLHQIFS-KFG 208
>gi|357443609|ref|XP_003592082.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481130|gb|AES62333.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|388492616|gb|AFK34374.1| unknown [Medicago truncatula]
Length = 443
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 14 QALTGQTDTQGG---PNTVLRVIIEHMLYPITLDVLYQ 48
Q LT +QG PN +L V I H+LYPIT+DVLYQ
Sbjct: 81 QELTTIDQSQGRGDEPNRILLVTIHHVLYPITVDVLYQ 118
>gi|296082547|emb|CBI21552.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 11 QAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ 48
Q +Q G D Q PN +L V I H+LYPIT++VL+Q
Sbjct: 88 QNSQGRKGDQDAQ--PNRILLVTIHHLLYPITVEVLHQ 123
>gi|90075792|dbj|BAE87576.1| unnamed protein product [Macaca fascicularis]
Length = 226
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|344271491|ref|XP_003407571.1| PREDICTED: regulator of differentiation 1 [Loxodonta africana]
Length = 581
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 8 AALQAAQALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AA + AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 185 AAQPGSLALSGAPTNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 235
>gi|334324359|ref|XP_001381834.2| PREDICTED: polypyrimidine tract-binding protein 2-like [Monodelphis
domestica]
Length = 640
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 249 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 307
Query: 55 G 55
G
Sbjct: 308 G 308
>gi|55669744|pdb|1SJR|A Chain A, Nmr Structure Of Rrm2 From Human Polypyrimidine Tract
Binding Protein Isoform 1 (Ptb1)
Length = 164
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 14/64 (21%)
Query: 5 SAQAALQAAQAL-TGQTDT------------QGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
SAQAALQA ++ +G G + VLR+I+E++ YP+TLDVL+Q +
Sbjct: 9 SAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFS 68
Query: 52 YKFG 55
KFG
Sbjct: 69 -KFG 71
>gi|297270365|ref|XP_001099980.2| PREDICTED: regulator of differentiation 1-like [Macaca mulatta]
Length = 860
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 471 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 514
>gi|13786186|ref|NP_112636.1| polypyrimidine tract-binding protein 3 [Rattus norvegicus]
gi|50401225|sp|Q9Z118.1|PTBP3_RAT RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|4514552|dbj|BAA75465.1| Rod1 [Rattus norvegicus]
Length = 523
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 126 SAVQSGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 177
>gi|344255742|gb|EGW11846.1| Polypyrimidine tract-binding protein 2 [Cricetulus griseus]
Length = 212
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 115 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 173
Query: 55 G 55
G
Sbjct: 174 G 174
>gi|391330010|ref|XP_003739458.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Metaseiulus
occidentalis]
Length = 588
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 19/20 (95%)
Query: 27 NTVLRVIIEHMLYPITLDVL 46
NTVLRVIIE+ LYPITLDVL
Sbjct: 228 NTVLRVIIENQLYPITLDVL 247
>gi|119579506|gb|EAW59102.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Homo
sapiens]
Length = 482
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
Query: 6 AQAALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
A +A+Q+ AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 83 AVSAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 136
>gi|338725424|ref|XP_001490156.3| PREDICTED: polypyrimidine tract-binding protein 2 [Equus caballus]
gi|402855346|ref|XP_003892287.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Papio
anubis]
gi|194379976|dbj|BAG58340.1| unnamed protein product [Homo sapiens]
Length = 325
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 115 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 173
Query: 55 G 55
G
Sbjct: 174 G 174
>gi|296489304|tpg|DAA31417.1| TPA: polypyrimidine tract binding protein 2-like [Bos taurus]
Length = 496
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 115 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 173
Query: 55 G 55
G
Sbjct: 174 G 174
>gi|16580751|dbj|BAB71743.1| PTB-like protein S [Homo sapiens]
gi|119593415|gb|EAW73009.1| polypyrimidine tract binding protein 2, isoform CRA_e [Homo
sapiens]
Length = 356
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|417402381|gb|JAA48040.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 531
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 2 NSASAQAALQAAQAL-TGQTDTQ------------GGPNTVLRVIIEHMLYPITLDVLYQ 48
N A AQAAL A ++ +G G + VLR+I+E++ YP+TLDVL+Q
Sbjct: 143 NQARAQAALHAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQ 202
Query: 49 FDNYKFG 55
+ KFG
Sbjct: 203 IFS-KFG 208
>gi|403283993|ref|XP_003933374.1| PREDICTED: polypyrimidine tract-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 191 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 249
Query: 55 G 55
G
Sbjct: 250 G 250
>gi|395535423|ref|XP_003769725.1| PREDICTED: polypyrimidine tract-binding protein 2 [Sarcophilus
harrisii]
Length = 494
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 108 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 166
Query: 55 G 55
G
Sbjct: 167 G 167
>gi|149037107|gb|EDL91638.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a
[Rattus norvegicus]
Length = 528
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 157 SAVQSGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 208
>gi|55733800|gb|AAV59307.1| putative polypyrimidine track-binding protein [Oryza sativa
Japonica Group]
Length = 389
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 20 TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
+D + PN +L V I HM+YPIT++VL+Q F Y +
Sbjct: 86 SDQESEPNRILLVTIHHMMYPITVEVLHQVFKAYGY 121
>gi|149037108|gb|EDL91639.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
gi|149037109|gb|EDL91640.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
Length = 514
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 117 SAVQSGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 168
>gi|334702287|gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum tuberosum]
Length = 441
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQ 48
PN +L V I HMLYPIT+DVL+Q
Sbjct: 97 PNRILLVTIHHMLYPITVDVLHQ 119
>gi|334332915|ref|XP_001376108.2| PREDICTED: regulator of differentiation 1 [Monodelphis domestica]
Length = 582
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
ALT ++GG + VLR+I+E++ YP+TL+VLYQ + KFG
Sbjct: 193 ALTAAPGSEGGVLPGQSPVLRIIVENLFYPVTLEVLYQIFS-KFG 236
>gi|158519869|ref|NP_001103551.1| polypyrimidine tract-binding protein 2 [Bos taurus]
gi|158455056|gb|AAI22581.1| PTBP2 protein [Bos taurus]
Length = 255
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|417402720|gb|JAA48196.1| Putative polypyrimidine tract-binding protein [Desmodus rotundus]
Length = 557
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 2 NSASAQAALQAAQAL-TGQTDTQ------------GGPNTVLRVIIEHMLYPITLDVLYQ 48
N A AQAAL A ++ +G G + VLR+I+E++ YP+TLDVL+Q
Sbjct: 143 NQARAQAALHAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQ 202
Query: 49 FDNYKFG 55
+ KFG
Sbjct: 203 IFS-KFG 208
>gi|345306392|ref|XP_001508115.2| PREDICTED: polypyrimidine tract-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 606
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 220 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 278
Query: 55 G 55
G
Sbjct: 279 G 279
>gi|426330458|ref|XP_004026228.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3
[Gorilla gorilla gorilla]
Length = 548
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 157 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 215
Query: 55 G 55
G
Sbjct: 216 G 216
>gi|351704481|gb|EHB07400.1| Polypyrimidine tract-binding protein 2 [Heterocephalus glaber]
Length = 539
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|194389558|dbj|BAG61740.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 157 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 215
Query: 55 G 55
G
Sbjct: 216 G 216
>gi|332221975|ref|XP_003260140.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Nomascus leucogenys]
Length = 568
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 177 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 235
Query: 55 G 55
G
Sbjct: 236 G 236
>gi|410967802|ref|XP_003990404.1| PREDICTED: polypyrimidine tract-binding protein 2 [Felis catus]
Length = 566
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 180 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 238
Query: 55 G 55
G
Sbjct: 239 G 239
>gi|348586487|ref|XP_003479000.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cavia
porcellus]
Length = 581
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 195 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 253
Query: 55 G 55
G
Sbjct: 254 G 254
>gi|332809593|ref|XP_003308280.1| PREDICTED: polypyrimidine tract-binding protein 2 [Pan troglodytes]
gi|397474051|ref|XP_003808504.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3 [Pan
paniscus]
Length = 548
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 157 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 215
Query: 55 G 55
G
Sbjct: 216 G 216
>gi|426362704|ref|XP_004048495.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 591
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 164 SAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 215
>gi|194389592|dbj|BAG61757.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 154 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 212
Query: 55 G 55
G
Sbjct: 213 G 213
>gi|16580749|dbj|BAB71742.1| PTB-like protein L [Homo sapiens]
gi|16741546|gb|AAH16582.1| Polypyrimidine tract binding protein 2 [Homo sapiens]
gi|119593413|gb|EAW73007.1| polypyrimidine tract binding protein 2, isoform CRA_c [Homo
sapiens]
gi|123980248|gb|ABM81953.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|157928112|gb|ABW03352.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|410216174|gb|JAA05306.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
gi|410328831|gb|JAA33362.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 532
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|440902651|gb|ELR53420.1| Polypyrimidine tract-binding protein 2, partial [Bos grunniens
mutus]
Length = 524
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 133 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 191
Query: 55 G 55
G
Sbjct: 192 G 192
>gi|25058871|gb|AAH39896.1| Similar to ROD1 regulator of differentiation 1 (S. pombe), partial
[Homo sapiens]
Length = 618
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 206 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 249
>gi|395821709|ref|XP_003784179.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Otolemur garnettii]
Length = 540
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 154 AQAVLQAVTAVQTASTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 212
Query: 55 G 55
G
Sbjct: 213 G 213
>gi|345801647|ref|XP_003434832.1| PREDICTED: polypyrimidine tract-binding protein 2 [Canis lupus
familiaris]
Length = 540
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 154 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 212
Query: 55 G 55
G
Sbjct: 213 G 213
>gi|297279326|ref|XP_001105013.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 2
[Macaca mulatta]
gi|332809591|ref|XP_001158089.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 7 [Pan
troglodytes]
gi|395730217|ref|XP_003775687.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pongo
abelii]
gi|397474049|ref|XP_003808503.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pan
paniscus]
gi|426330456|ref|XP_004026227.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 540
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 154 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 212
Query: 55 G 55
G
Sbjct: 213 G 213
>gi|301758643|ref|XP_002915171.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Ailuropoda
melanoleuca]
gi|395730215|ref|XP_002810624.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pongo
abelii]
gi|22218304|gb|AAM94624.1| non-neuronal splice variant nPTB3 [Homo sapiens]
gi|119593414|gb|EAW73008.1| polypyrimidine tract binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 537
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|395821711|ref|XP_003784180.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Otolemur garnettii]
Length = 531
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTASTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|354504008|ref|XP_003514071.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cricetulus
griseus]
Length = 501
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 115 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 173
Query: 55 G 55
G
Sbjct: 174 G 174
>gi|402855348|ref|XP_003892288.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Papio
anubis]
Length = 506
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 115 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 173
Query: 55 G 55
G
Sbjct: 174 G 174
>gi|10863997|ref|NP_067013.1| polypyrimidine tract-binding protein 2 [Homo sapiens]
gi|332221969|ref|XP_003260137.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Nomascus leucogenys]
gi|332809589|ref|XP_001157727.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
troglodytes]
gi|345801645|ref|XP_547270.3| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Canis
lupus familiaris]
gi|397474047|ref|XP_003808502.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
paniscus]
gi|426330454|ref|XP_004026226.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|74761983|sp|Q9UKA9.1|PTBP2_HUMAN RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=Neurally-enriched homolog of PTB; AltName:
Full=PTB-like protein
gi|6492336|gb|AAF14284.1|AF176085_1 neural polypyrimidine tract binding protein [Homo sapiens]
gi|22711855|tpg|DAA00060.1| TPA_exp: splicing regulator nPTB1 [Homo sapiens]
gi|119593411|gb|EAW73005.1| polypyrimidine tract binding protein 2, isoform CRA_a [Homo
sapiens]
gi|380815182|gb|AFE79465.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|384948520|gb|AFI37865.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|410298260|gb|JAA27730.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 531
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|355745467|gb|EHH50092.1| hypothetical protein EGM_00861, partial [Macaca fascicularis]
Length = 529
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 143 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 201
Query: 55 G 55
G
Sbjct: 202 G 202
>gi|297279324|ref|XP_001105316.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 6
[Macaca mulatta]
gi|22218306|gb|AAM94625.1| non-neuronal splice variant nPTB4 [Homo sapiens]
gi|119593412|gb|EAW73006.1| polypyrimidine tract binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 536
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|410043023|ref|XP_003951547.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 554
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|291398459|ref|XP_002715890.1| PREDICTED: polypyrimidine tract binding protein 2 [Oryctolagus
cuniculus]
Length = 536
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|355567525|gb|EHH23866.1| hypothetical protein EGK_07422, partial [Macaca mulatta]
Length = 558
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 169 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 212
>gi|281349698|gb|EFB25282.1| hypothetical protein PANDA_003123 [Ailuropoda melanoleuca]
Length = 501
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 110 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 168
Query: 55 G 55
G
Sbjct: 169 G 169
>gi|115464105|ref|NP_001055652.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|113579203|dbj|BAF17566.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|215734982|dbj|BAG95704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196864|gb|EEC79291.1| hypothetical protein OsI_20097 [Oryza sativa Indica Group]
gi|222631716|gb|EEE63848.1| hypothetical protein OsJ_18672 [Oryza sativa Japonica Group]
Length = 444
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 20 TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
+D + PN +L V I HM+YPIT++VL+Q F Y +
Sbjct: 94 SDQESEPNRILLVTIHHMMYPITVEVLHQVFKAYGY 129
>gi|431896401|gb|ELK05813.1| Polypyrimidine tract-binding protein 2 [Pteropus alecto]
Length = 485
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 94 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 152
Query: 55 G 55
G
Sbjct: 153 G 153
>gi|297685129|ref|XP_002820148.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pongo
abelii]
Length = 558
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 169 ALSGGPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 212
>gi|73959499|ref|XP_866820.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4 [Canis
lupus familiaris]
gi|119593416|gb|EAW73010.1| polypyrimidine tract binding protein 2, isoform CRA_f [Homo
sapiens]
Length = 480
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 94 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 152
Query: 55 G 55
G
Sbjct: 153 G 153
>gi|349732190|ref|NP_001231826.1| polypyrimidine tract-binding protein 3 isoform 5 [Homo sapiens]
Length = 547
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|349732192|ref|NP_001231827.1| polypyrimidine tract-binding protein 3 isoform 6 [Homo sapiens]
gi|114626184|ref|XP_001149612.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 5 [Pan
troglodytes]
gi|397479183|ref|XP_003810907.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pan
paniscus]
gi|27882560|gb|AAH44585.1| ROD1 protein [Homo sapiens]
gi|119579503|gb|EAW59099.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Homo
sapiens]
Length = 558
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 169 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 212
>gi|344293564|ref|XP_003418492.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Loxodonta
africana]
Length = 686
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 295 AQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 353
Query: 55 G 55
G
Sbjct: 354 G 354
>gi|402896665|ref|XP_003911411.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Papio
anubis]
Length = 521
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 132 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 175
>gi|296190586|ref|XP_002743247.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Callithrix jacchus]
Length = 558
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 169 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 212
>gi|119601315|gb|EAW80909.1| hCG41678, isoform CRA_b [Homo sapiens]
Length = 446
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 8/48 (16%)
Query: 8 AALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AA+ A A+ GQ+ VLR+I+E++ YP TLDVL+Q + KFG
Sbjct: 230 AAVDAGMAMAGQS-------LVLRIIVENLFYPTTLDVLHQIFS-KFG 269
>gi|403266191|ref|XP_003925277.1| PREDICTED: polypyrimidine tract-binding protein 3 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 169 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 212
>gi|390458239|ref|XP_003732081.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Callithrix jacchus]
Length = 524
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|426362706|ref|XP_004048496.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
gi|4514554|dbj|BAA75466.1| Rod1 [Homo sapiens]
Length = 521
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 132 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 175
>gi|355753108|gb|EHH57154.1| hypothetical protein EGM_06734, partial [Macaca fascicularis]
Length = 539
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 150 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 193
>gi|402896661|ref|XP_003911409.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Papio
anubis]
Length = 524
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|375073695|gb|AFA34406.1| polypirimidine tract binding 2 protein, partial [Ostrea edulis]
Length = 142
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 16 LTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAFS 59
+ G +G T LR+I+EH++YP+ ++VLYQ + KFG
Sbjct: 61 VMGGPTEEGQKRTTLRIIVEHLVYPVGIEVLYQIFS-KFGKVLK 103
>gi|395740821|ref|XP_002820150.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pongo
abelii]
Length = 524
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALSGGPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|449441199|ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Cucumis sativus]
Length = 408
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 4 ASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAF 58
+S Q A Q G+ D PN +L V I HMLYPIT++VL+Q F H F
Sbjct: 42 SSHQELTTADQNAQGRGDE---PNRILLVTIHHMLYPITVEVLHQV---FFPHGF 90
>gi|148670262|gb|EDL02209.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Mus
musculus]
Length = 590
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 193 SAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 244
>gi|449503770|ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 4 ASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAF 58
+S Q A Q G+ D PN +L V I HMLYPIT++VL+Q F H F
Sbjct: 78 SSHQELTTADQNAQGRGDE---PNRILLVTIHHMLYPITVEVLHQV---FFPHGF 126
>gi|343959136|dbj|BAK63423.1| regulator of differentiation 1 [Pan troglodytes]
Length = 524
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|13879326|gb|AAH06638.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 520
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 123 SAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 174
>gi|193786069|dbj|BAG50959.1| unnamed protein product [Homo sapiens]
Length = 457
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 68 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 111
>gi|255003738|ref|NP_001157260.1| polypyrimidine tract-binding protein 3 isoform 2 [Homo sapiens]
gi|397479181|ref|XP_003810906.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
paniscus]
gi|410043017|ref|XP_003951545.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
gi|194380114|dbj|BAG63824.1| unnamed protein product [Homo sapiens]
Length = 524
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|30039680|ref|NP_835458.1| polypyrimidine tract-binding protein 3 isoform 2 [Mus musculus]
gi|50401558|sp|Q8BHD7.1|PTBP3_MOUSE RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|26329429|dbj|BAC28453.1| unnamed protein product [Mus musculus]
gi|26353590|dbj|BAC40425.1| unnamed protein product [Mus musculus]
gi|34785867|gb|AAH57641.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 523
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 126 SAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 177
>gi|380801045|gb|AFE72398.1| regulator of differentiation 1 isoform 1, partial [Macaca mulatta]
Length = 456
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 67 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 110
>gi|302782650|ref|XP_002973098.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
gi|302790002|ref|XP_002976769.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300155807|gb|EFJ22438.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300158851|gb|EFJ25472.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
Length = 436
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 11 QAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHA 57
QA Q D PN +L V I H LYPIT+DVL+Q N GH
Sbjct: 88 QATQPRRPAGDQDQQPNRILLVTIHHPLYPITVDVLHQVFN-PHGHV 133
>gi|349732186|ref|NP_001231825.1| polypyrimidine tract-binding protein 3 isoform 4 [Homo sapiens]
gi|332832555|ref|XP_001149256.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
troglodytes]
Length = 457
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 68 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 111
>gi|148670263|gb|EDL02210.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Mus
musculus]
Length = 556
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 159 SAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 210
>gi|449441197|ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Cucumis sativus]
Length = 434
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 4 ASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAF 58
+S Q A Q G+ D PN +L V I HMLYPIT++VL+Q F H F
Sbjct: 80 SSHQELTTADQNAQGRGDE---PNRILLVTIHHMLYPITVEVLHQV---FFPHGF 128
>gi|405953685|gb|EKC21299.1| Regulator of differentiation 1 [Crassostrea gigas]
Length = 764
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 16 LTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAF 58
+ G +G T LR+I+EH++YP+ ++VLYQ + KFG
Sbjct: 381 VMGGPTEEGQKRTTLRIIVEHLVYPVGIEVLYQIFS-KFGKVL 422
>gi|255003744|ref|NP_001157262.1| polypyrimidine tract-binding protein 3 isoform 3 [Homo sapiens]
gi|114626182|ref|XP_528390.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 6 [Pan
troglodytes]
gi|397479185|ref|XP_003810908.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pan
paniscus]
gi|51476645|emb|CAH18301.1| hypothetical protein [Homo sapiens]
Length = 555
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 158 SAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 209
>gi|38569466|ref|NP_005147.3| polypyrimidine tract-binding protein 3 isoform 1 [Homo sapiens]
gi|218511814|sp|O95758.2|PTBP3_HUMAN RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|119579504|gb|EAW59100.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
gi|119579505|gb|EAW59101.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
Length = 552
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 155 SAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 206
>gi|402896663|ref|XP_003911410.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Papio
anubis]
Length = 555
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 158 SAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 209
>gi|444509522|gb|ELV09317.1| Polypyrimidine tract-binding protein 1, partial [Tupaia chinensis]
Length = 522
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLRVI+E++ YP+TLDVL+Q + KFG
Sbjct: 154 GQSPVLRVIVENLFYPVTLDVLHQIFS-KFG 183
>gi|410043020|ref|XP_003951546.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 558
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 161 SAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 212
>gi|291382801|ref|XP_002708166.1| PREDICTED: ROD1 regulator of differentiation 1-like [Oryctolagus
cuniculus]
Length = 1000
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 611 ALPGAPSNEGTILPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 654
>gi|209362272|gb|ACI43571.1| RBP50 [Cucurbita maxima]
Length = 445
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 4 ASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAF 58
+S Q A Q G+ D PN +L V I HMLYPIT++VL+Q F H F
Sbjct: 78 SSHQELTTADQNAQGRGDE---PNRILLVTIHHMLYPITVEVLHQV---FFPHGF 126
>gi|395740824|ref|XP_002820149.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pongo
abelii]
Length = 555
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 158 SAVQSGSLALSGGPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 209
>gi|390332444|ref|XP_003723502.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 5
[Strongylocentrotus purpuratus]
Length = 555
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
DT GG NT+LRVI+E++ Y IT+D L++
Sbjct: 206 DTGGGVNTILRVIVENVTYQITVDTLHEI 234
>gi|148670261|gb|EDL02208.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Mus
musculus]
Length = 528
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 157 SAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 208
>gi|255003709|ref|NP_659153.2| polypyrimidine tract-binding protein 3 isoform 1 [Mus musculus]
Length = 551
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G T +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 154 SAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 205
>gi|444730196|gb|ELW70586.1| Regulator of differentiation 1 [Tupaia chinensis]
Length = 386
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL G ++G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 123 SAVQSGSLALPGAPSSEGPVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 174
>gi|90085391|dbj|BAE91436.1| unnamed protein product [Macaca fascicularis]
Length = 352
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL+G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 63 ALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 106
>gi|390332437|ref|XP_003723500.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 649
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
DT GG NT+LRVI+E++ Y IT+D L++
Sbjct: 266 DTGGGVNTILRVIVENVTYQITVDTLHEI 294
>gi|395514526|ref|XP_003761466.1| PREDICTED: polypyrimidine tract-binding protein 3 [Sarcophilus
harrisii]
Length = 505
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
S AL AAQ G G + VLR+I+E++ YP++L+VLYQ + KFG
Sbjct: 138 SGSLALPAAQGNEG--GVLPGQSPVLRIIVENLFYPVSLEVLYQIFS-KFG 185
>gi|390332446|ref|XP_003723503.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 6
[Strongylocentrotus purpuratus]
Length = 603
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
DT GG NT+LRVI+E++ Y IT+D L++
Sbjct: 254 DTGGGVNTILRVIVENVTYQITVDTLHEI 282
>gi|432103873|gb|ELK30706.1| Polypyrimidine tract-binding protein 2 [Myotis davidii]
Length = 538
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQAL-TGQTDTQG----------GPNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A+ T T G + VLR+II++M YP+TLDVL+Q KF
Sbjct: 112 AQAVLQAVTAVQTANTPLSGTAVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFT-KF 170
Query: 55 G 55
G
Sbjct: 171 G 171
>gi|326925087|ref|XP_003208753.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Meleagris
gallopavo]
Length = 531
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A ++G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQATNAPISGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|294461205|gb|ADE76165.1| unknown [Picea sitchensis]
Length = 461
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 11 QAAQAL-TGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ 48
Q+ QA G D+Q PN +L V I H+LYPIT++VL+Q
Sbjct: 88 QSGQARRNGDQDSQ--PNRILLVTIHHLLYPITVEVLHQ 124
>gi|390332435|ref|XP_003723499.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 631
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
DT GG NT+LRVI+E++ Y IT+D L++
Sbjct: 248 DTGGGVNTILRVIVENVTYQITVDTLHEI 276
>gi|118094291|ref|XP_422322.2| PREDICTED: polypyrimidine tract-binding protein 2 [Gallus gallus]
Length = 531
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A ++G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQATNAPISGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|426219707|ref|XP_004004060.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Ovis
aries]
Length = 526
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL G ++G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALPGAPTSEGTILPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|301781136|ref|XP_002925987.1| PREDICTED: regulator of differentiation 1-like [Ailuropoda
melanoleuca]
Length = 567
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 170 SAVQSGNLALPGAPPNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 221
>gi|327270713|ref|XP_003220133.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Anolis
carolinensis]
Length = 531
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQAL-TGQTDTQG----------GPNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A+ T T G + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQTTNTPISGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|71896363|ref|NP_001026106.1| polypyrimidine tract-binding protein 1 [Gallus gallus]
gi|60098495|emb|CAH65078.1| hypothetical protein RCJMB04_3b17 [Gallus gallus]
Length = 526
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Query: 10 LQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+ A A+ GQ+ VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 141 VDAGMAMAGQS-------PVLRIIVENLFYPVTLDVLHQIFS-KFG 178
>gi|85003003|gb|ABC68595.1| polypyrimidine tract binding protein [Paracentrotus lividus]
Length = 618
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
DT GG NT+LRVI+E++ Y IT+D L++
Sbjct: 236 DTGGGVNTILRVIVENVTYQITVDTLHEI 264
>gi|326934420|ref|XP_003213288.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Meleagris
gallopavo]
Length = 526
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Query: 10 LQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+ A A+ GQ+ VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 141 VDAGMAMAGQS-------PVLRIIVENLFYPVTLDVLHQIFS-KFG 178
>gi|148699703|gb|EDL31650.1| mCG13402, isoform CRA_g [Mus musculus]
Length = 366
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|432101132|gb|ELK29416.1| Polypyrimidine tract-binding protein 1 [Myotis davidii]
Length = 566
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Query: 10 LQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+ A A+ GQ+ VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 VDAGMAMAGQS-------PVLRIIVENLFYPVTLDVLHQIFS-KFG 216
>gi|47198889|emb|CAF88128.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Query: 29 VLRVIIEHMLYPITLDVLYQFDNYKFG 55
VLRVI+E++ YP+TLDVL+Q + KFG
Sbjct: 22 VLRVIVENLFYPVTLDVLHQIFS-KFG 47
>gi|115634663|ref|XP_001176080.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 617
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
DT GG NT+LRVI+E++ Y IT+D L++ F Y
Sbjct: 234 DTGGGVNTILRVIVENVTYQITVDTLHEIFRKY 266
>gi|449508136|ref|XP_002190438.2| PREDICTED: polypyrimidine tract-binding protein 2 [Taeniopygia
guttata]
Length = 537
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQA LQA A ++G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQAVLQAVTAVQASNAPISGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|431918462|gb|ELK17686.1| Regulator of differentiation 1 [Pteropus alecto]
Length = 523
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
SA +L A T + G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 126 SAVQSGSLALPGAPTNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 177
>gi|332255809|ref|XP_003277021.1| PREDICTED: polypyrimidine tract-binding protein 1 [Nomascus
leucogenys]
Length = 505
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 14/63 (22%)
Query: 6 AQAALQAAQAL-TGQTDTQ------------GGPNTVLRVIIEHMLYPITLDVLYQFDNY 52
AQAALQA ++ +G G + VLR+I+E++ YP+TLDVL+Q +
Sbjct: 116 AQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFS- 174
Query: 53 KFG 55
KFG
Sbjct: 175 KFG 177
>gi|390332442|ref|XP_003723501.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 4
[Strongylocentrotus purpuratus]
Length = 662
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
DT GG NT+LRVI+E++ Y IT+D L++
Sbjct: 313 DTGGGVNTILRVIVENVTYQITVDTLHEI 341
>gi|354480918|ref|XP_003502650.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 591
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 214 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 243
>gi|149034650|gb|EDL89387.1| polypyrimidine tract binding protein 1, isoform CRA_d [Rattus
norvegicus]
Length = 500
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 148 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 177
>gi|148699697|gb|EDL31644.1| mCG13402, isoform CRA_b [Mus musculus]
Length = 499
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 148 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 177
>gi|19911240|dbj|BAB86943.1| polypirimidine tract binding protein [Mus musculus]
Length = 528
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|266862|sp|Q00438.1|PTBP1_RAT RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I; AltName: Full=Pyrimidine-binding protein;
Short=PYBP
Length = 555
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|28849152|dbj|BAC65159.1| polypirimidine tract binding protein [Mus musculus]
Length = 554
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|55824722|gb|AAH86489.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|351714013|gb|EHB16932.1| Polypyrimidine tract-binding protein 1, partial [Heterocephalus
glaber]
Length = 548
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 168 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 197
>gi|149025820|gb|EDL82063.1| polypyrimidine tract binding protein 2, isoform CRA_c [Rattus
norvegicus]
Length = 243
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQ LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|20809354|gb|AAH28848.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|224089408|ref|XP_002188238.1| PREDICTED: polypyrimidine tract-binding protein 3 [Taeniopygia
guttata]
Length = 488
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Query: 28 TVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+VLR+I+E++ YP+TLD+LYQ + KFG
Sbjct: 147 SVLRIIVENVFYPVTLDILYQIFS-KFG 173
>gi|402743987|ref|NP_001257986.1| polypyrimidine tract-binding protein 1 isoform a [Rattus
norvegicus]
gi|38197632|gb|AAH61858.1| Ptbp1 protein [Rattus norvegicus]
gi|149034647|gb|EDL89384.1| polypyrimidine tract binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 556
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|149034648|gb|EDL89385.1| polypyrimidine tract binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 490
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 138 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 167
>gi|148699701|gb|EDL31648.1| mCG13402, isoform CRA_e [Mus musculus]
Length = 454
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 194 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 223
>gi|116517301|ref|NP_001070831.1| polypyrimidine tract-binding protein 1 isoform 1 [Mus musculus]
gi|13938631|gb|AAH07472.1| Polypyrimidine tract binding protein 1 [Mus musculus]
gi|26328983|dbj|BAC28230.1| unnamed protein product [Mus musculus]
gi|26334239|dbj|BAC30837.1| unnamed protein product [Mus musculus]
gi|26335929|dbj|BAC31665.1| unnamed protein product [Mus musculus]
gi|26341260|dbj|BAC34292.1| unnamed protein product [Mus musculus]
gi|26353506|dbj|BAC40383.1| unnamed protein product [Mus musculus]
gi|74191391|dbj|BAE30277.1| unnamed protein product [Mus musculus]
gi|148699699|gb|EDL31646.1| mCG13402, isoform CRA_c [Mus musculus]
Length = 555
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|42490826|gb|AAH66210.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|74178228|dbj|BAE29899.1| unnamed protein product [Mus musculus]
Length = 529
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|281345981|gb|EFB21565.1| hypothetical protein PANDA_015565 [Ailuropoda melanoleuca]
Length = 444
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ AL G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 116 SAVQSGNLALPGAPPNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 167
>gi|74196849|dbj|BAE43140.1| unnamed protein product [Mus musculus]
Length = 530
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|402765974|ref|NP_071961.2| polypyrimidine tract-binding protein 1 isoform b [Rattus
norvegicus]
gi|149034649|gb|EDL89386.1| polypyrimidine tract binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 530
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|116517303|ref|NP_032982.2| polypyrimidine tract-binding protein 1 isoform 2 [Mus musculus]
gi|26336949|dbj|BAC32158.1| unnamed protein product [Mus musculus]
gi|26342100|dbj|BAC34712.1| unnamed protein product [Mus musculus]
gi|26349809|dbj|BAC38544.1| unnamed protein product [Mus musculus]
gi|74211646|dbj|BAE29183.1| unnamed protein product [Mus musculus]
gi|74212275|dbj|BAE40295.1| unnamed protein product [Mus musculus]
gi|148699696|gb|EDL31643.1| mCG13402, isoform CRA_a [Mus musculus]
gi|148699698|gb|EDL31645.1| mCG13402, isoform CRA_a [Mus musculus]
Length = 529
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|26331660|dbj|BAC29560.1| unnamed protein product [Mus musculus]
gi|148699700|gb|EDL31647.1| mCG13402, isoform CRA_d [Mus musculus]
Length = 489
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 138 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 167
>gi|57002|emb|CAA43202.1| pyrimidine binding protein 1 [Rattus norvegicus]
Length = 530
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|159163719|pdb|2ADB|A Chain A, Solution Structure Of Polypyrimidine Tract Binding
Protein Rbd2 Complexed With Cucucu Rna
Length = 148
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Query: 10 LQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+ A A+ GQ+ VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 21 MDAGMAMAGQS-------PVLRIIVENLFYPVTLDVLHQIFS-KFG 58
>gi|74152131|dbj|BAE32096.1| unnamed protein product [Mus musculus]
Length = 555
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|395750059|ref|XP_003779055.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Pongo abelii]
Length = 782
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 404 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 433
>gi|74193172|dbj|BAE20599.1| unnamed protein product [Mus musculus]
gi|74193487|dbj|BAE20681.1| unnamed protein product [Mus musculus]
gi|74193495|dbj|BAE20685.1| unnamed protein product [Mus musculus]
Length = 241
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQ LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|355714176|gb|AES04919.1| polypyrimidine tract binding protein 1 [Mustela putorius furo]
Length = 353
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|74194434|dbj|BAE37269.1| unnamed protein product [Mus musculus]
Length = 520
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|390332439|ref|XP_780392.3| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 7
[Strongylocentrotus purpuratus]
Length = 659
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
DT GG NT+LRVI+E++ Y IT+D L++ F Y
Sbjct: 276 DTGGGVNTILRVIVENVTYQITVDTLHEIFRKY 308
>gi|440893263|gb|ELR46101.1| Polypyrimidine tract-binding protein 1, partial [Bos grunniens
mutus]
Length = 548
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 170 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 199
>gi|354508326|ref|XP_003516204.1| PREDICTED: polypyrimidine tract-binding protein 1-like, partial
[Cricetulus griseus]
Length = 214
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 14/65 (21%)
Query: 4 ASAQAALQAAQALTGQT-------------DTQGGPNTVLRVIIEHMLYPITLDVLYQFD 50
A AQAALQA ++ + G + VLRV++E++ YP+TLDVL Q
Sbjct: 144 ARAQAALQAVNSVHSRNLALAASAAAVDAGMAMAGQSPVLRVLVENLFYPVTLDVLNQIF 203
Query: 51 NYKFG 55
+ KFG
Sbjct: 204 S-KFG 207
>gi|119581561|gb|EAW61157.1| polypyrimidine tract binding protein 1, isoform CRA_f [Homo
sapiens]
Length = 520
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 149 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 178
>gi|26353062|dbj|BAC40161.1| unnamed protein product [Mus musculus]
Length = 299
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|431922192|gb|ELK19283.1| Polypyrimidine tract-binding protein 1 [Pteropus alecto]
Length = 566
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 185 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 214
>gi|395831594|ref|XP_003788880.1| PREDICTED: polypyrimidine tract-binding protein 1 [Otolemur
garnettii]
Length = 582
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 211 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 240
>gi|355717047|gb|AES05805.1| ROD1 regulator of differentiation 1 [Mustela putorius furo]
Length = 497
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
SA +L A T + G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 101 SAVQSGSLALPGAPTNEGTILPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 152
>gi|62087400|dbj|BAD92147.1| polypyrimidine tract-binding protein 1 isoform c variant [Homo
sapiens]
Length = 329
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 196 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 225
>gi|158454983|gb|AAI03384.1| PTBP1 protein [Bos taurus]
Length = 446
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|73987389|ref|XP_542215.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Canis
lupus familiaris]
Length = 557
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|194212378|ref|XP_001915461.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Equus caballus]
Length = 596
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 226 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 255
>gi|119581557|gb|EAW61153.1| polypyrimidine tract binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 527
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 149 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 178
>gi|426229473|ref|XP_004008815.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Ovis
aries]
Length = 550
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|47523538|ref|NP_999396.1| polypyrimidine tract-binding protein 1 [Sus scrofa]
gi|2500586|sp|Q29099.1|PTBP1_PIG RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|1122433|emb|CAA63597.1| polypyrimidine tract-binding protein [Sus scrofa]
Length = 557
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|426386366|ref|XP_004059656.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 559
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|426229469|ref|XP_004008813.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Ovis
aries]
Length = 557
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|4506243|ref|NP_002810.1| polypyrimidine tract-binding protein 1 isoform a [Homo sapiens]
gi|332850812|ref|XP_001172084.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Pan
troglodytes]
gi|32354|emb|CAA47386.1| nuclear ribonucleoprotein [Homo sapiens]
gi|35772|emb|CAA46444.1| polypirimidine tract binding protein [Homo sapiens]
gi|12803183|gb|AAH02397.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|15489171|gb|AAH13694.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|30582477|gb|AAP35465.1| polypyrimidine tract binding protein 1 [Homo sapiens]
gi|61359435|gb|AAX41718.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|61359442|gb|AAX41719.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|119581558|gb|EAW61154.1| polypyrimidine tract binding protein 1, isoform CRA_c [Homo
sapiens]
gi|410218528|gb|JAA06483.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301208|gb|JAA29204.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 557
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|119581562|gb|EAW61158.1| polypyrimidine tract binding protein 1, isoform CRA_g [Homo
sapiens]
Length = 501
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 149 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 178
>gi|30583817|gb|AAP36157.1| Homo sapiens polypyrimidine tract binding protein 1 [synthetic
construct]
gi|61369451|gb|AAX43339.1| polypyrimidine tract binding protein 1 [synthetic construct]
Length = 558
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|344243367|gb|EGV99470.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 528
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 151 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 180
>gi|297275608|ref|XP_001092088.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Macaca
mulatta]
Length = 556
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|14165464|ref|NP_114367.1| polypyrimidine tract-binding protein 1 isoform b [Homo sapiens]
gi|332850820|ref|XP_003316018.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Pan
troglodytes]
gi|35770|emb|CAA46443.1| polypirimidine tract binding protein [Homo sapiens]
gi|119581556|gb|EAW61152.1| polypyrimidine tract binding protein 1, isoform CRA_a [Homo
sapiens]
gi|410218532|gb|JAA06485.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 550
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|73987397|ref|XP_868637.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 6 [Canis
lupus familiaris]
Length = 550
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|410949959|ref|XP_003981684.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Felis catus]
Length = 508
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|402903490|ref|XP_003914598.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Papio
anubis]
Length = 549
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|348550210|ref|XP_003460925.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Cavia porcellus]
Length = 557
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|297275604|ref|XP_002801040.1| PREDICTED: polypyrimidine tract-binding protein 1 [Macaca mulatta]
Length = 549
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|27806103|ref|NP_776867.1| polypyrimidine tract-binding protein 1 [Bos taurus]
gi|426229471|ref|XP_004008814.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Ovis
aries]
gi|75073578|sp|Q8WN55.1|PTBP1_BOVIN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB
gi|17298537|gb|AAL38169.1|AF445640_1 polypyrimidine-tract binding protein [Bos taurus]
gi|296485353|tpg|DAA27468.1| TPA: polypyrimidine tract-binding protein 1 [Bos taurus]
Length = 531
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|402903486|ref|XP_003914596.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Papio
anubis]
gi|380814964|gb|AFE79356.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
gi|384948416|gb|AFI37813.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
Length = 556
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|426386370|ref|XP_004059658.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 552
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|432091564|gb|ELK24589.1| Regulator of differentiation 1 [Myotis davidii]
Length = 524
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 15 ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
AL G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 135 ALPGAPTNEGTMLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 178
>gi|14165466|ref|NP_114368.1| polypyrimidine tract-binding protein 1 isoform c [Homo sapiens]
gi|332850814|ref|XP_003316017.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Pan
troglodytes]
gi|131528|sp|P26599.1|PTBP1_HUMAN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=57 kDa RNA-binding protein PPTB-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|35768|emb|CAA43973.1| polypirimidine tract binding protein [Homo sapiens]
gi|35774|emb|CAA43056.1| polypyrimidine tract-binding protein (pPTB) [Homo sapiens]
gi|4096061|gb|AAC99798.1| PTB_HUMAN [Homo sapiens]
gi|13325140|gb|AAH04383.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|119581559|gb|EAW61155.1| polypyrimidine tract binding protein 1, isoform CRA_d [Homo
sapiens]
gi|261860774|dbj|BAI46909.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|410218530|gb|JAA06484.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301206|gb|JAA29203.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 531
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|355702910|gb|EHH29401.1| hypothetical protein EGK_09820, partial [Macaca mulatta]
Length = 555
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 177 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 206
>gi|297275606|ref|XP_001092214.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 530
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|73987401|ref|XP_868641.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 8 [Canis
lupus familiaris]
Length = 531
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|348550212|ref|XP_003460926.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Cavia porcellus]
Length = 531
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|224066621|ref|XP_002302167.1| predicted protein [Populus trichocarpa]
gi|222843893|gb|EEE81440.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 3/31 (9%)
Query: 21 DTQGG---PNTVLRVIIEHMLYPITLDVLYQ 48
+TQG PN +L V I HMLYPIT++VL+Q
Sbjct: 89 NTQGRGDEPNRILLVTIHHMLYPITVEVLHQ 119
>gi|426386368|ref|XP_004059657.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 533
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|148680405|gb|EDL12352.1| polypyrimidine tract binding protein 2, isoform CRA_b [Mus
musculus]
Length = 529
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQ LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 143 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 201
Query: 55 G 55
G
Sbjct: 202 G 202
>gi|402903488|ref|XP_003914597.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Papio
anubis]
gi|380814966|gb|AFE79357.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
gi|384948418|gb|AFI37814.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
Length = 530
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 178 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 207
>gi|148680404|gb|EDL12351.1| polypyrimidine tract binding protein 2, isoform CRA_a [Mus
musculus]
Length = 528
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQ LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 143 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 201
Query: 55 G 55
G
Sbjct: 202 G 202
>gi|116175255|ref|NP_001070683.1| regulator of differentiation 1 [Sus scrofa]
gi|115371761|gb|ABI96205.1| ROD1 [Sus scrofa]
Length = 523
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 3 SASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
SA +L A T + G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 124 SAVQSGSLGLPGAPTNEGTILPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 175
>gi|16307418|gb|AAH10255.1| Polypyrimidine tract binding protein 2 [Mus musculus]
Length = 531
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQ LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|281341342|gb|EFB16926.1| hypothetical protein PANDA_012716 [Ailuropoda melanoleuca]
Length = 540
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 167 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 196
>gi|301776290|ref|XP_002923578.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 526
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 179 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|53850638|ref|NP_001005555.1| polypyrimidine tract-binding protein 2 [Rattus norvegicus]
gi|81910658|sp|Q66H20.1|PTBP2_RAT RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=PTB-like protein
gi|93140675|sp|Q91Z31.2|PTBP2_MOUSE RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Brain-enriched polypyrimidine tract-binding
protein; Short=Brain-enriched PTB; AltName: Full=Neural
polypyrimidine tract-binding protein; AltName:
Full=RRM-type RNA-binding protein brPTB
gi|51859313|gb|AAH82076.1| Polypyrimidine tract binding protein 2 [Rattus norvegicus]
gi|149025819|gb|EDL82062.1| polypyrimidine tract binding protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 531
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQ LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|25392158|pir||JC7526 polypyrimidine tract-binding protein-like protein - rat
Length = 532
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQ LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|9507003|ref|NP_062423.1| polypyrimidine tract-binding protein 2 [Mus musculus]
gi|8358154|gb|AAF21807.2|AF095718_1 RRM-type RNA-binding protein brPTB [Mus musculus]
gi|5824110|emb|CAB54073.1| PTB-like protein [Rattus rattus]
gi|22711857|tpg|DAA00061.1| TPA_exp: splicing regulator nPTB2 [Mus musculus]
gi|74209570|dbj|BAE23317.1| unnamed protein product [Mus musculus]
Length = 532
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 6 AQAALQAAQA-------LTGQTDTQGG----PNTVLRVIIEHMLYPITLDVLYQFDNYKF 54
AQ LQA A L+G T ++ + VLR+II++M YP+TLDVL+Q + KF
Sbjct: 146 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFS-KF 204
Query: 55 G 55
G
Sbjct: 205 G 205
>gi|365813382|pdb|3ZZY|A Chain A, Crystal Structure Of A Raver1 Pri3 Peptide In Complex
With Polypyrimidine Tract Binding Protein Rrm2
gi|365813383|pdb|3ZZY|B Chain B, Crystal Structure Of A Raver1 Pri3 Peptide In Complex
With Polypyrimidine Tract Binding Protein Rrm2
gi|365813386|pdb|3ZZZ|A Chain A, Crystal Structure Of A Raver1 Pri4 Peptide In Complex
With Polypyrimidine Tract Binding Protein Rrm2
gi|365813387|pdb|3ZZZ|B Chain B, Crystal Structure Of A Raver1 Pri4 Peptide In Complex
With Polypyrimidine Tract Binding Protein Rrm2
Length = 130
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 24 GGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 23 AGQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 53
>gi|224087659|ref|XP_002196400.1| PREDICTED: polypyrimidine tract-binding protein 1 [Taeniopygia
guttata]
Length = 525
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 149 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 178
>gi|47218405|emb|CAG12676.1| unnamed protein product [Tetraodon nigroviridis]
Length = 582
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 7 QAALQAAQAL----TGQTDTQ----GGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAF 58
QA LQA A+ + +D Q + VLR+II++M YP+TLDVL Q F H
Sbjct: 158 QAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFYPVTLDVLQQV---AFPHPL 214
Query: 59 STSLA 63
S+
Sbjct: 215 PPSVG 219
>gi|432964272|ref|XP_004086906.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 541
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 3 SASAQAALQAAQALTG-----QTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
S QA LQA A+ Q + VLR+II++M YP+TLDVL Q + KFG
Sbjct: 162 SQRTQAVLQAVSAVQPPGSEVQDVLAAASSPVLRIIIDNMFYPVTLDVLQQIFS-KFG 218
>gi|410928343|ref|XP_003977560.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Takifugu
rubripes]
Length = 534
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 2 NSASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
N AQAAL+A A + ++VLRV++E++LYP++LD L Q + KFG
Sbjct: 134 NQERAQAALRAFGA-SHMAPCAVASSSVLRVVVENLLYPVSLDALCQIFS-KFG 185
>gi|356499519|ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQ 48
PN +L V + HMLYPIT DVL+Q
Sbjct: 96 PNRILLVTVHHMLYPITADVLHQ 118
>gi|356559629|ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQ 48
PN +L V + HMLYPIT DVL+Q
Sbjct: 96 PNRILLVTVHHMLYPITADVLHQ 118
>gi|354486792|ref|XP_003505562.1| PREDICTED: regulator of differentiation 1-like [Cricetulus griseus]
Length = 643
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 246 SAVQSGNLSLPGAPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 297
>gi|344244560|gb|EGW00664.1| Regulator of differentiation 1 [Cricetulus griseus]
Length = 523
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 8 AALQAAQ-ALTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+A+Q+ +L G +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 126 SAVQSGNLSLPGAPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 177
>gi|403308155|ref|XP_003944537.1| PREDICTED: uncharacterized protein LOC101029560 [Saimiri
boliviensis boliviensis]
Length = 1167
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 24 GGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 413 AGQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 443
>gi|395824362|ref|XP_003785435.1| PREDICTED: polypyrimidine tract-binding protein 3 [Otolemur
garnettii]
Length = 534
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Query: 16 LTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
L G + +G G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 146 LPGASSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 188
>gi|313234966|emb|CBY24911.1| unnamed protein product [Oikopleura dioica]
Length = 788
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVL 46
+ +GG N VLRV++E+M YP TL+VL
Sbjct: 248 EAEGGSNHVLRVVVENMTYPTTLEVL 273
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 21 DTQGGPNTVLRVIIEHMLYPITLDVL 46
+ +GG N VLRV++E+M YP TL+VL
Sbjct: 418 EAEGGSNHVLRVVVENMTYPTTLEVL 443
>gi|52545658|emb|CAH56358.1| hypothetical protein [Homo sapiens]
Length = 216
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 91 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 124
>gi|334326796|ref|XP_001375584.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Monodelphis
domestica]
Length = 557
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Query: 29 VLRVIIEHMLYPITLDVLYQFDNYKFG 55
VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 183 VLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|395513379|ref|XP_003760903.1| PREDICTED: polypyrimidine tract-binding protein 1 [Sarcophilus
harrisii]
Length = 557
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Query: 29 VLRVIIEHMLYPITLDVLYQFDNYKFG 55
VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 183 VLRIIVENLFYPVTLDVLHQIFS-KFG 208
>gi|120612455|ref|YP_972133.1| hypothetical protein Aave_3814 [Acidovorax citrulli AAC00-1]
gi|120590919|gb|ABM34359.1| protein of unknown function DUF1185 [Acidovorax citrulli AAC00-1]
Length = 181
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 5 SAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
+ +A L AQ++ T +GGP T+L V + H+L P + D FD FG
Sbjct: 104 AVRAGLPGAQSIMPSTAKRGGPGTLLDVPVHHVLDPWSFD---HFDAVTFG 151
>gi|354504485|ref|XP_003514305.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 322
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+++E++ YP+TLDVL+Q + KFG
Sbjct: 134 GQSPVLRILVENLFYPVTLDVLHQIFS-KFG 163
>gi|348556107|ref|XP_003463864.1| PREDICTED: regulator of differentiation 1-like [Cavia porcellus]
Length = 688
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 313 GQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 342
>gi|253723235|pdb|2E5I|A Chain A, Solution Structure Of Rna Binding Domain 2 In
Heterogeneous Nuclear Ribonucleoprotein L-Like
Length = 124
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 14 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 47
>gi|344251032|gb|EGW07136.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 323
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+++E++ YP+TLDVL+Q + KFG
Sbjct: 174 GQSPVLRILVENLFYPVTLDVLHQIFS-KFG 203
>gi|74222755|dbj|BAE42243.1| unnamed protein product [Mus musculus]
Length = 172
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 52 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 85
>gi|119620775|gb|EAX00370.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_c
[Homo sapiens]
Length = 175
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 52 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 85
>gi|351710810|gb|EHB13729.1| Regulator of differentiation 1, partial [Heterocephalus glaber]
Length = 539
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+IIE++ YP+TL+VL+Q + KFG
Sbjct: 164 GQSPVLRIIIENLFYPVTLEVLHQIFS-KFG 193
>gi|320170468|gb|EFW47367.1| polypyrimidine tract-binding protein PTB-2 [Capsaspora owczarzaki
ATCC 30864]
Length = 546
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 AAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAF 58
A+ + +G D+ P VLRV I ++LY +TLDVL+Q + KFG+
Sbjct: 158 ASGSHSGNNDSSFEPKPVLRVEIHNVLYVVTLDVLHQIFS-KFGNVL 203
>gi|224082480|ref|XP_002306709.1| predicted protein [Populus trichocarpa]
gi|222856158|gb|EEE93705.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 21 DTQGG---PNTVLRVIIEHMLYPITLDVLYQ 48
+TQG PN +L + I HM YPIT+DVL+Q
Sbjct: 89 NTQGRGEEPNRILLITIHHMQYPITVDVLHQ 119
>gi|348540154|ref|XP_003457553.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 511
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 29 VLRVIIEHMLYPITLDVLYQFDNYKFG 55
VLR+II++M YP+TLDVL Q + KFG
Sbjct: 167 VLRIIIDNMFYPVTLDVLQQIFS-KFG 192
>gi|156392443|ref|XP_001636058.1| predicted protein [Nematostella vectensis]
gi|156223157|gb|EDO43995.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 8 AALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQF 49
+L + + G+ + G +LR+I+E+MLYPIT++VL Q
Sbjct: 104 GSLTSGLGIAGELPSVNG--CILRIIVENMLYPITIEVLNQI 143
>gi|67678144|gb|AAH97557.1| VgRBP60 protein [Xenopus laevis]
Length = 472
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL Q + KFG
Sbjct: 182 GQSPVLRIIVENLFYPVTLDVLQQIFS-KFG 211
>gi|147906715|ref|NP_001083815.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|6002571|gb|AAF00041.1|AF091370_1 hnRNP I-related RNA transport protein VgRBP60 [Xenopus laevis]
Length = 552
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL Q + KFG
Sbjct: 182 GQSPVLRIIVENLFYPVTLDVLQQIFS-KFG 211
>gi|58331982|ref|NP_001011140.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|54261503|gb|AAH84469.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|89272472|emb|CAJ82472.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 554
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL Q + KFG
Sbjct: 182 GQSPVLRIIVENLFYPVTLDVLQQIFS-KFG 211
>gi|426226432|ref|XP_004007347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Ovis
aries]
Length = 507
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 122 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 155
>gi|326915072|ref|XP_003203845.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Meleagris gallopavo]
Length = 489
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 104 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 137
>gi|449274548|gb|EMC83649.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Columba livia]
Length = 471
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 88 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 121
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 254 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 287
>gi|363731463|ref|XP_414998.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gallus
gallus]
Length = 514
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 129 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 162
>gi|359493143|ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
[Vitis vinifera]
Length = 432
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQ 48
PN +L V I H+LYPIT++VL+Q
Sbjct: 97 PNRILLVTIHHLLYPITVEVLHQ 119
>gi|359493141|ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
[Vitis vinifera]
Length = 445
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQ 48
PN +L V I H+LYPIT++VL+Q
Sbjct: 99 PNRILLVTIHHLLYPITVEVLHQ 121
>gi|296081200|emb|CBI18226.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQ 48
PN +L V I H+LYPIT++VL+Q
Sbjct: 97 PNRILLVTIHHLLYPITVEVLHQ 119
>gi|281350475|gb|EFB26059.1| hypothetical protein PANDA_013339 [Ailuropoda melanoleuca]
Length = 368
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 160 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 193
>gi|294460075|gb|ADE75620.1| unknown [Picea sitchensis]
Length = 471
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 17 TGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ 48
+G D+Q PN +L V I H+L+PIT++VL+Q
Sbjct: 95 SGDQDSQ--PNRILLVTIHHLLFPITVEVLHQ 124
>gi|357133525|ref|XP_003568375.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 444
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 5 SAQAALQAAQALTGQ-TDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNYKF 54
S+ L Q+ G+ +D PN +L I HM+YPIT++VL+Q F Y +
Sbjct: 78 SSHQELTTDQSSHGRNSDQDSEPNRILLATIHHMIYPITVEVLHQVFKAYGY 129
>gi|119601314|gb|EAW80908.1| hCG41678, isoform CRA_a [Homo sapiens]
Length = 183
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP TLDVL+Q + KFG
Sbjct: 5 GQSLVLRIIVENLFYPTTLDVLHQIFS-KFG 34
>gi|31416927|gb|AAH08217.2| HNRPLL protein [Homo sapiens]
Length = 275
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 152 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 185
>gi|395508191|ref|XP_003758397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Sarcophilus harrisii]
Length = 500
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 115 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 148
>gi|12849891|dbj|BAB28521.1| unnamed protein product [Mus musculus]
Length = 588
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 203 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 236
>gi|351715514|gb|EHB18433.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Heterocephalus glaber]
Length = 479
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 94 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 127
>gi|335308902|ref|XP_003361415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Sus
scrofa]
Length = 552
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 168 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 201
>gi|335775957|gb|AEH58745.1| heterogeneous nuclear ribonucleoprotein L-lik-like protein [Equus
caballus]
Length = 424
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 39 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 72
>gi|148699702|gb|EDL31649.1| mCG13402, isoform CRA_f [Mus musculus]
Length = 257
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 24 GGPNTVLRVIIEHMLYPITLDVLYQ 48
G + VLR+I+E++ YP+TLDVL+Q
Sbjct: 204 AGQSPVLRIIVENLFYPVTLDVLHQ 228
>gi|25988650|gb|AAN76190.1| BLOCK24 variant [Homo sapiens]
Length = 262
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 152 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 185
>gi|402890610|ref|XP_003908576.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
3 [Papio anubis]
Length = 413
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 52 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 85
>gi|344288860|ref|XP_003416164.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Loxodonta
africana]
Length = 489
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 104 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 137
>gi|187608032|ref|NP_001120518.1| polypyrimidine tract binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|170287806|gb|AAI61422.1| LOC100145652 protein [Xenopus (Silurana) tropicalis]
Length = 519
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TL+VL+Q + KFG
Sbjct: 146 GQSPVLRIIVENLFYPVTLEVLHQIFS-KFG 175
>gi|402890608|ref|XP_003908575.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
2 [Papio anubis]
Length = 403
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 52 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 85
>gi|67972328|dbj|BAE02506.1| unnamed protein product [Macaca fascicularis]
Length = 437
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 52 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 85
>gi|332227246|ref|XP_003262804.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Nomascus leucogenys]
Length = 542
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|223647470|gb|ACN10493.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 27/78 (34%)
Query: 2 NSASAQAALQAAQALTGQT-----------------DTQGGP---------NTVLRVIIE 35
N QAALQA A+ G T GG + VLRVI+E
Sbjct: 147 NQVRVQAALQAVNAVQGGTMLGSTMSGMGGGMGASMSVGGGEMGARGMATQSPVLRVIVE 206
Query: 36 HMLYPITLDVLYQ-FDNY 52
++ YP+TL+VL+Q F Y
Sbjct: 207 NLFYPVTLEVLHQIFSKY 224
>gi|224046933|ref|XP_002199365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Taeniopygia guttata]
Length = 546
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 161 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 194
>gi|402890606|ref|XP_003908574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform
1 [Papio anubis]
gi|119620774|gb|EAX00369.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_b
[Homo sapiens]
Length = 437
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 52 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 85
>gi|213513392|ref|NP_001133760.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
gi|209155238|gb|ACI33851.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 27/78 (34%)
Query: 2 NSASAQAALQAAQALTGQT-----------------DTQGGP---------NTVLRVIIE 35
N QAALQA A+ G T GG + VLRVI+E
Sbjct: 147 NQVRVQAALQAVNAVQGGTMLGSTMSGMGGGMGATMSVGGGEMGARGMATQSPVLRVIVE 206
Query: 36 HMLYPITLDVLYQ-FDNY 52
++ YP+TL+VL+Q F Y
Sbjct: 207 NLFYPVTLEVLHQIFSKY 224
>gi|417398360|gb|JAA46213.1| Putative heteroproteinous nuclear ribonucleoprotein l [Desmodus
rotundus]
Length = 285
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|397493591|ref|XP_003817687.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Pan paniscus]
Length = 505
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 154 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 187
>gi|397493589|ref|XP_003817686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pan paniscus]
Length = 539
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 154 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 187
>gi|116004021|ref|NP_001070368.1| heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|115305250|gb|AAI23452.1| Heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|296482596|tpg|DAA24711.1| TPA: heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
Length = 541
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 156 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 189
>gi|440907649|gb|ELR57769.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Bos
grunniens mutus]
Length = 541
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 156 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 189
>gi|20149709|ref|NP_612403.2| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Homo
sapiens]
gi|62286941|sp|Q8WVV9.1|HNRLL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like;
Short=hnRNPLL; AltName: Full=Stromal RNA-regulating
factor
gi|17028350|gb|AAH17480.1| Heterogeneous nuclear ribonucleoprotein L-like [Homo sapiens]
gi|62988915|gb|AAY24302.1| unknown [Homo sapiens]
gi|158256360|dbj|BAF84151.1| unnamed protein product [Homo sapiens]
gi|380784945|gb|AFE64348.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|383409735|gb|AFH28081.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|410214350|gb|JAA04394.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410253266|gb|JAA14600.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289230|gb|JAA23215.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410329931|gb|JAA33912.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 542
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|410955436|ref|XP_003984359.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Felis catus]
Length = 510
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 159 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 192
>gi|359321615|ref|XP_003639639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
Length = 545
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 160 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 193
>gi|343961675|dbj|BAK62427.1| heterogeneous nuclear ribonucleoprotein L-like protein [Pan
troglodytes]
Length = 513
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 152 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 185
>gi|296224059|ref|XP_002757888.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Callithrix jacchus]
Length = 509
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 158 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 191
>gi|390474560|ref|XP_002757889.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Callithrix jacchus]
Length = 543
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 158 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 191
>gi|158257950|dbj|BAF84948.1| unnamed protein product [Homo sapiens]
Length = 537
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 152 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 185
>gi|403269680|ref|XP_003926844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Saimiri
boliviensis boliviensis]
gi|33518884|gb|AAQ20083.1| stromal RNA regulating factor [Homo sapiens]
Length = 508
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|109102687|ref|XP_001109883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Macaca mulatta]
Length = 508
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|431912753|gb|ELK14771.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Pteropus
alecto]
Length = 484
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|37514843|gb|AAH12849.2| Hnrpll protein [Mus musculus]
Length = 594
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 209 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 242
>gi|217416379|ref|NP_001136122.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo
sapiens]
gi|25988649|gb|AAN76189.1| BLOCK24 variant [Homo sapiens]
gi|67005958|gb|AAQ20084.2| stromal RNA regulating factor [Homo sapiens]
gi|383409737|gb|AFH28082.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|384950354|gb|AFI38782.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|410214348|gb|JAA04393.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289228|gb|JAA23214.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 537
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 152 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 185
>gi|417402541|gb|JAA48116.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 542
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|417401975|gb|JAA47851.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 502
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|410955434|ref|XP_003984358.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Felis catus]
Length = 544
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 159 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 192
>gi|410035018|ref|XP_003949838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Pan
troglodytes]
Length = 513
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 152 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 185
>gi|387018124|gb|AFJ51180.1| Heterogeneous nuclear ribonucleoprotein L-like [Crotalus
adamanteus]
Length = 539
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 154 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 187
>gi|395846042|ref|XP_003795724.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Otolemur
garnettii]
Length = 536
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 151 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 184
>gi|355565619|gb|EHH22048.1| hypothetical protein EGK_05237 [Macaca mulatta]
Length = 542
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|354488933|ref|XP_003506620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 576
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 184 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 217
>gi|348574608|ref|XP_003473082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Cavia
porcellus]
Length = 541
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 156 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 189
>gi|338714336|ref|XP_001918049.2| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Equus caballus]
Length = 543
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 158 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 191
>gi|334313145|ref|XP_001365024.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 538
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 153 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 186
>gi|301777342|ref|XP_002924098.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Ailuropoda melanoleuca]
Length = 281
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 183 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 216
>gi|395731919|ref|XP_002812155.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pongo abelii]
Length = 509
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 158 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 191
>gi|291386909|ref|XP_002709957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryctolagus cuniculus]
Length = 547
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 162 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 195
>gi|410035016|ref|XP_001168474.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 4
[Pan troglodytes]
gi|426335280|ref|XP_004029156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gorilla
gorilla gorilla]
gi|119620773|gb|EAX00368.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_a [Homo
sapiens]
Length = 537
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 152 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 185
>gi|119620776|gb|EAX00371.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
gi|119620777|gb|EAX00372.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
Length = 542
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|110347535|ref|NP_659051.3| heterogeneous nuclear ribonucleoprotein L-like [Mus musculus]
gi|62286942|sp|Q921F4.3|HNRLL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like
Length = 591
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 206 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 239
>gi|291386911|ref|XP_002709958.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryctolagus cuniculus]
Length = 541
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 156 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 189
>gi|26330256|dbj|BAC28858.1| unnamed protein product [Mus musculus]
Length = 326
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 206 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 239
>gi|109102683|ref|XP_001109932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Macaca mulatta]
Length = 542
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 157 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 190
>gi|327262697|ref|XP_003216160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 551
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 166 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 199
>gi|109102685|ref|XP_001109971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Macaca mulatta]
Length = 537
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 152 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 185
>gi|293347913|ref|XP_001063027.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
gi|293359746|ref|XP_233805.5| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
Length = 591
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 206 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 239
>gi|74147193|dbj|BAE27500.1| unnamed protein product [Mus musculus]
Length = 670
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 285 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 318
>gi|281210224|gb|EFA84392.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 468
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQF 49
PN +L V I +++YP+T+DVLYQ
Sbjct: 135 PNNILLVTISNIIYPVTIDVLYQL 158
>gi|410904361|ref|XP_003965660.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Takifugu
rubripes]
Length = 481
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 11/64 (17%)
Query: 2 NSASAQAALQA-------AQALTGQTDTQG---GPNTVLRVIIEHMLYPITLDVLYQFDN 51
N + +AALQA + + +D +G G + VLR+I+E++ YP+TL+VL Q +
Sbjct: 108 NLTNQRAALQAISTAAMHSGTMAPGSDGRGVVHGQSPVLRIIVENLFYPVTLEVLQQIFS 167
Query: 52 YKFG 55
KFG
Sbjct: 168 -KFG 170
>gi|149050609|gb|EDM02782.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 261
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 206 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 239
>gi|47209150|emb|CAF89890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 569
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 11/64 (17%)
Query: 2 NSASAQAALQA-------AQALTGQTDTQGGPNT---VLRVIIEHMLYPITLDVLYQFDN 51
N + +AALQA + ++ D +GG + VLR+I+E++ YP++L+VL Q +
Sbjct: 89 NLTNQRAALQAISTASMHSGSMAAGGDGRGGVHAQSPVLRIIVENLFYPVSLEVLQQIFS 148
Query: 52 YKFG 55
KFG
Sbjct: 149 -KFG 151
>gi|334702289|gb|AEG89704.1| polypyrimidine tract-binding protein 6 [Solanum tuberosum]
Length = 444
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 26 PNTVLRVIIEHMLYPITLDVLYQ 48
PN +L V I H+LYPIT++VL+Q
Sbjct: 97 PNRILLVSIHHVLYPITVEVLHQ 119
>gi|441622594|ref|XP_003264050.2| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 3 isoform 1 [Nomascus leucogenys]
Length = 555
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 2 NSASAQAALQAAQA-------LTGQTDTQG----GPNTVLRVIIEHMLYPITLDVLYQFD 50
N A AQ ALQA A L+G +G G + VL +IIE++ Y TL+VL+Q
Sbjct: 146 NQARAQDALQAVSAVQSGSLALSGGRSNEGTVLPGQSPVLXIIIENLFYRGTLEVLHQIF 205
Query: 51 NYKFG 55
+ KFG
Sbjct: 206 S-KFG 209
>gi|390457006|ref|ZP_10242534.1| CRISPR-associated endonuclease Cas [Paenibacillus peoriae KCTC
3763]
Length = 903
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 7 QAALQAAQALTGQTDTQGGPNTVLRVIIEHML--YPITLDVLYQFDNYKFGHAFSTSLAM 64
+ L+A AL G+ DT+ RV++E L YP+TL F NY FG +LA
Sbjct: 416 EGELEAEAALEGK-DTEPDNTDFKRVLLERQLLQYPVTLTSHVNFFNYLFGTGREANLAF 474
Query: 65 PR--------DELAGFRSE 75
DE+ +R+E
Sbjct: 475 AHLCNSVIVLDEIQSYRNE 493
>gi|148700268|gb|EDL32215.1| mCG50057 [Mus musculus]
Length = 253
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + LR+I+E++ YP+TLD+++Q + KFG
Sbjct: 189 GQSPALRIIVENLFYPVTLDMVHQIFS-KFG 218
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.129 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,073,953,951
Number of Sequences: 23463169
Number of extensions: 33375690
Number of successful extensions: 73877
Number of sequences better than 100.0: 424
Number of HSP's better than 100.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 73320
Number of HSP's gapped (non-prelim): 491
length of query: 80
length of database: 8,064,228,071
effective HSP length: 51
effective length of query: 29
effective length of database: 6,867,606,452
effective search space: 199160587108
effective search space used: 199160587108
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)