Your job contains 1 sequence.
>psy9172
MNSASAQAALQAAQALTGQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDNYKFGHAFST
SLAMPRDELAGFRSEATEFS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9172
(80 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011224 - symbol:heph "hephaestus" species:7227 "D... 119 3.4e-06 1
ZFIN|ZDB-GENE-030131-9796 - symbol:ptbp1b "polypyrimidine... 102 0.00015 1
WB|WBGene00004207 - symbol:ptb-1 species:6239 "Caenorhabd... 102 0.00016 1
UNIPROTKB|K7ES59 - symbol:PTBP1 "Polypyrimidine tract-bin... 89 0.00072 1
UNIPROTKB|K7EKJ7 - symbol:PTBP1 "Polypyrimidine tract-bin... 89 0.00094 1
UNIPROTKB|C9JJZ7 - symbol:HNRPLL "Heterogeneous nuclear r... 84 0.00097 1
>FB|FBgn0011224 [details] [associations]
symbol:heph "hephaestus" species:7227 "Drosophila
melanogaster" [GO:0007286 "spermatid development" evidence=IMP]
[GO:0008187 "poly-pyrimidine tract binding" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0007219 "Notch
signaling pathway" evidence=IMP] [GO:0008586 "imaginal disc-derived
wing vein morphogenesis" evidence=IMP] [GO:0008587 "imaginal
disc-derived wing margin morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0007319 "negative regulation of oskar mRNA
translation" evidence=IMP] [GO:0008103 "oocyte microtubule
cytoskeleton polarization" evidence=IMP] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0000900 "translation repressor activity,
nucleic acid binding" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IGI] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007291 "sperm individualization" evidence=IMP]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0008103 GO:GO:0000166 GO:GO:0008586
Gene3D:3.30.70.330 GO:GO:0007291 GO:GO:0003730 GO:GO:0030529
GO:GO:0000398 GO:GO:0000900 GO:GO:0008587 GO:GO:0007319
GO:GO:0008187 CTD:9843 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 KO:K14948 UniGene:Dm.19417
GeneID:48571 KEGG:dme:Dmel_CG31000 FlyBase:FBgn0011224 ChiTaRS:HEPH
GenomeRNAi:48571 NextBio:839481 HSSP:P26599 EMBL:AY052367
EMBL:BT030984 RefSeq:NP_001163787.1 RefSeq:NP_001163790.1
RefSeq:NP_788780.1 SMR:Q95UI6 STRING:Q95UI6
EnsemblMetazoa:FBtr0085881 EnsemblMetazoa:FBtr0300263
EnsemblMetazoa:FBtr0300266 UCSC:CG31000-RH InParanoid:Q95UI6
Uniprot:Q95UI6
Length = 789
Score = 119 (46.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
G T+ GGPNTVLRVI+E ++YP++LD+L+Q F Y
Sbjct: 394 GNTNAAGGPNTVLRVIVESLMYPVSLDILHQIFQRY 429
>ZFIN|ZDB-GENE-030131-9796 [details] [associations]
symbol:ptbp1b "polypyrimidine tract binding
protein 1b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-9796
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:BC091854 IPI:IPI00613822
UniGene:Dr.75263 ProteinModelPortal:Q58EL3 STRING:Q58EL3
InParanoid:Q58EL3 ArrayExpress:Q58EL3 Bgee:Q58EL3 Uniprot:Q58EL3
Length = 586
Score = 102 (41.0 bits), Expect = 0.00015, P = 0.00015
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 18 GQTDTQG--GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G D G GP+ VLRVI+E++ YP+TLDVL+Q + KFG
Sbjct: 199 GGVDPSGMTGPSPVLRVIVENLFYPVTLDVLHQIFS-KFG 237
>WB|WBGene00004207 [details] [associations]
symbol:ptb-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0000398 EMBL:Z36948 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 eggNOG:NOG263741 HOGENOM:HOG000231699
OMA:IKMHNHK PIR:A88299 PIR:T20381 RefSeq:NP_741041.1 HSSP:P26599
ProteinModelPortal:Q18999 SMR:Q18999 DIP:DIP-24857N IntAct:Q18999
MINT:MINT-1089938 STRING:Q18999 PaxDb:Q18999 PRIDE:Q18999
EnsemblMetazoa:D2089.4a GeneID:174647 KEGG:cel:CELE_D2089.4
UCSC:D2089.4a CTD:174647 WormBase:D2089.4a InParanoid:Q18999
NextBio:884900 ArrayExpress:Q18999 Uniprot:Q18999
Length = 615
Score = 102 (41.0 bits), Expect = 0.00016, P = 0.00016
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 19 QTDTQGGPNTVLRVIIEHMLYPITLDVLYQ-FDNY 52
+ TQ PN+VLR IIE+M++P++LDVLYQ F Y
Sbjct: 221 EVGTQQQPNSVLRTIIENMMFPVSLDVLYQLFTRY 255
>UNIPROTKB|K7ES59 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
Ensembl:ENST00000586481 Uniprot:K7ES59
Length = 209
Score = 89 (36.4 bits), Expect = 0.00072, P = 0.00072
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 149 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 178
>UNIPROTKB|K7EKJ7 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
Ensembl:ENST00000589575 Uniprot:K7EKJ7
Length = 236
Score = 89 (36.4 bits), Expect = 0.00094, P = 0.00094
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 25 GPNTVLRVIIEHMLYPITLDVLYQFDNYKFG 55
G + VLR+I+E++ YP+TLDVL+Q + KFG
Sbjct: 176 GQSPVLRIIVENLFYPVTLDVLHQIFS-KFG 205
>UNIPROTKB|C9JJZ7 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC011247 HGNC:HGNC:25127 HOGENOM:HOG000168824 IPI:IPI00915954
ProteinModelPortal:C9JJZ7 SMR:C9JJZ7 STRING:C9JJZ7
Ensembl:ENST00000425682 ArrayExpress:C9JJZ7 Bgee:C9JJZ7
Uniprot:C9JJZ7
Length = 149
Score = 84 (34.6 bits), Expect = 0.00097, P = 0.00097
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 18 GQTDTQGGPNTVLRVIIEHMLYPITLDVLYQFDN 51
G TD G N VL + I++ LYPIT+DVLY N
Sbjct: 96 GNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCN 129
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 80 66 0.00091 102 3 11 22 0.42 28
29 0.48 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 435 (46 KB)
Total size of DFA: 78 KB (2064 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 6.86u 0.10s 6.96t Elapsed: 00:00:01
Total cpu time: 6.86u 0.10s 6.96t Elapsed: 00:00:01
Start: Thu Aug 15 17:03:53 2013 End: Thu Aug 15 17:03:54 2013