Query psy9182
Match_columns 486
No_of_seqs 915 out of 3979
Neff 11.1
Searched_HMMs 29240
Date Fri Aug 16 21:02:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.2E-43 3.2E-47 338.7 40.8 314 102-467 116-443 (445)
2 1vyh_C Platelet-activating fac 100.0 4.3E-43 1.5E-47 336.6 37.1 276 101-465 105-410 (410)
3 2ymu_A WD-40 repeat protein; u 100.0 7E-41 2.4E-45 336.6 42.5 323 102-463 219-577 (577)
4 3ow8_A WD repeat-containing pr 100.0 6.1E-41 2.1E-45 310.5 38.7 276 101-465 29-320 (321)
5 1got_B GT-beta; complex (GTP-b 100.0 1.7E-40 5.9E-45 310.5 41.4 274 101-463 52-340 (340)
6 2ynn_A Coatomer subunit beta'; 100.0 2.4E-40 8.2E-45 304.5 39.0 276 102-466 11-302 (304)
7 1nr0_A Actin interacting prote 100.0 2.2E-40 7.4E-45 334.3 41.4 322 102-468 16-357 (611)
8 1nr0_A Actin interacting prote 100.0 6.9E-40 2.4E-44 330.6 42.4 320 101-468 56-399 (611)
9 4gqb_B Methylosome protein 50; 100.0 7.2E-40 2.5E-44 305.6 37.2 229 239-470 89-335 (344)
10 1p22_A F-BOX/WD-repeat protein 100.0 4.2E-40 1.5E-44 318.8 34.7 277 103-472 132-420 (435)
11 2pbi_B Guanine nucleotide-bind 100.0 2.9E-39 1E-43 303.6 39.1 280 101-463 61-354 (354)
12 4ery_A WD repeat-containing pr 100.0 3.1E-39 1E-43 298.6 38.6 277 101-465 20-311 (312)
13 2ymu_A WD-40 repeat protein; u 100.0 1.2E-38 3.9E-43 320.4 45.4 324 101-465 177-538 (577)
14 4g56_B MGC81050 protein; prote 100.0 9.1E-40 3.1E-44 307.4 33.2 280 101-469 39-346 (357)
15 1r5m_A SIR4-interacting protei 100.0 2.7E-39 9.1E-44 312.1 35.9 316 101-465 42-424 (425)
16 3iz6_a 40S ribosomal protein R 100.0 6.6E-40 2.3E-44 311.4 30.1 298 125-468 45-377 (380)
17 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5E-38 1.7E-42 305.3 40.4 287 131-468 103-393 (445)
18 3frx_A Guanine nucleotide-bind 100.0 7E-38 2.4E-42 290.1 39.3 275 101-467 14-318 (319)
19 1erj_A Transcriptional repress 100.0 5.6E-38 1.9E-42 299.5 39.1 295 102-466 62-389 (393)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-38 1.5E-42 294.8 37.6 284 102-472 13-341 (345)
21 3v7d_B Cell division control p 100.0 5.6E-38 1.9E-42 306.8 39.8 310 102-463 119-460 (464)
22 1pgu_A Actin interacting prote 100.0 4.4E-38 1.5E-42 318.5 40.0 363 101-466 60-614 (615)
23 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-37 3.8E-42 301.9 36.6 273 213-485 112-384 (435)
24 1gxr_A ESG1, transducin-like e 100.0 6.4E-37 2.2E-41 285.9 40.3 317 102-465 7-336 (337)
25 3iz6_a 40S ribosomal protein R 100.0 1.1E-38 3.7E-43 303.0 28.1 289 101-428 63-377 (380)
26 2pm9_A Protein WEB1, protein t 100.0 4.9E-39 1.7E-43 309.6 24.1 319 104-467 12-415 (416)
27 3vl1_A 26S proteasome regulato 100.0 2.4E-37 8.2E-42 298.2 35.8 312 106-466 58-419 (420)
28 2hes_X YDR267CP; beta-propelle 100.0 1.1E-36 3.6E-41 283.5 38.7 287 135-466 3-328 (330)
29 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-37 4.2E-42 340.1 36.7 365 102-470 655-1162(1249)
30 4aow_A Guanine nucleotide-bind 100.0 3.8E-36 1.3E-40 281.2 40.6 292 133-468 25-339 (340)
31 2ynn_A Coatomer subunit beta'; 100.0 2.8E-36 9.6E-41 277.4 38.4 227 240-468 21-261 (304)
32 2xzm_R RACK1; ribosome, transl 100.0 7.1E-37 2.4E-41 286.5 34.7 274 101-467 18-341 (343)
33 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-36 5E-41 317.4 39.6 344 101-467 14-606 (902)
34 1pgu_A Actin interacting prote 100.0 1.2E-36 3.9E-41 308.2 37.1 322 100-465 14-365 (615)
35 3sfz_A APAF-1, apoptotic pepti 100.0 4.3E-37 1.5E-41 335.8 36.2 339 101-469 612-1119(1249)
36 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-36 4.2E-41 317.9 34.9 345 103-464 57-659 (902)
37 1vyh_C Platelet-activating fac 100.0 5.3E-36 1.8E-40 287.3 36.5 225 241-468 117-371 (410)
38 2hes_X YDR267CP; beta-propelle 100.0 7.7E-36 2.7E-40 277.7 34.1 285 101-426 11-328 (330)
39 3odt_A Protein DOA1; ubiquitin 100.0 5.7E-35 1.9E-39 269.8 37.8 274 101-469 15-299 (313)
40 1sq9_A Antiviral protein SKI8; 100.0 1.3E-35 4.5E-40 283.8 31.9 280 101-467 13-396 (397)
41 3k26_A Polycomb protein EED; W 100.0 7.1E-36 2.4E-40 282.2 28.7 285 99-465 13-365 (366)
42 3zwl_B Eukaryotic translation 100.0 1.7E-34 5.9E-39 272.9 38.1 280 98-467 26-347 (369)
43 4aez_A CDC20, WD repeat-contai 100.0 1.3E-34 4.5E-39 277.2 37.3 281 101-471 88-385 (401)
44 4aow_A Guanine nucleotide-bind 100.0 7.6E-35 2.6E-39 272.3 34.8 280 101-428 35-339 (340)
45 4gga_A P55CDC, cell division c 100.0 5.1E-34 1.7E-38 274.8 41.2 279 101-468 100-397 (420)
46 3gre_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 285.0 32.4 321 101-463 60-437 (437)
47 1k8k_C P40, ARP2/3 complex 41 100.0 9.5E-35 3.3E-39 275.2 34.5 279 102-467 6-362 (372)
48 3dm0_A Maltose-binding peripla 100.0 2E-34 7E-39 295.4 38.4 274 101-465 379-692 (694)
49 3ow8_A WD repeat-containing pr 100.0 4.1E-34 1.4E-38 264.7 36.4 235 230-467 28-280 (321)
50 4ggc_A P55CDC, cell division c 100.0 1.5E-33 5.3E-38 260.9 40.1 277 101-466 20-315 (318)
51 3v7d_B Cell division control p 100.0 1.1E-33 3.7E-38 276.4 40.1 290 127-469 101-424 (464)
52 3vl1_A 26S proteasome regulato 100.0 2E-34 7E-39 277.7 33.2 270 171-470 66-369 (420)
53 3dwl_C Actin-related protein 2 100.0 1.6E-35 5.6E-40 281.2 25.0 274 103-464 10-377 (377)
54 3ei3_B DNA damage-binding prot 100.0 2.9E-34 9.9E-39 273.2 33.1 276 101-466 70-382 (383)
55 1got_B GT-beta; complex (GTP-b 100.0 3.5E-33 1.2E-37 260.9 39.3 224 242-468 65-303 (340)
56 4gqb_B Methylosome protein 50; 100.0 5.1E-34 1.7E-38 266.1 32.8 235 103-428 81-333 (344)
57 1r5m_A SIR4-interacting protei 100.0 9.9E-34 3.4E-38 273.0 35.3 303 125-468 24-363 (425)
58 4a11_B DNA excision repair pro 100.0 1.5E-34 5E-39 277.4 29.0 321 100-465 39-404 (408)
59 4a11_B DNA excision repair pro 100.0 8.2E-34 2.8E-38 272.2 34.1 312 123-470 20-369 (408)
60 4e54_B DNA damage-binding prot 100.0 9.6E-35 3.3E-39 281.1 27.5 280 102-468 117-432 (435)
61 4h5i_A Guanine nucleotide-exch 100.0 1.6E-33 5.4E-38 265.5 34.4 293 105-468 15-345 (365)
62 2j04_B YDR362CP, TAU91; beta p 100.0 3.9E-35 1.3E-39 287.2 23.3 328 104-467 133-518 (524)
63 3i2n_A WD repeat-containing pr 100.0 4.3E-34 1.5E-38 269.0 29.0 280 101-467 15-354 (357)
64 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-33 6.1E-38 294.3 36.2 317 101-466 10-386 (814)
65 1gxr_A ESG1, transducin-like e 100.0 2.1E-32 7.2E-37 255.3 36.9 274 102-424 49-335 (337)
66 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-32 8.8E-37 255.6 36.3 247 226-472 10-289 (345)
67 4ery_A WD repeat-containing pr 100.0 3.4E-32 1.1E-36 251.3 36.6 227 239-468 30-270 (312)
68 1yfq_A Cell cycle arrest prote 100.0 5.9E-33 2E-37 259.8 31.9 275 101-464 8-322 (342)
69 2pbi_B Guanine nucleotide-bind 100.0 4.6E-32 1.6E-36 254.6 37.8 223 243-468 75-317 (354)
70 2pm7_B Protein transport prote 100.0 2.5E-32 8.5E-37 250.1 33.6 226 240-466 17-285 (297)
71 2pm9_A Protein WEB1, protein t 100.0 1.6E-33 5.5E-38 271.0 26.8 287 148-471 14-342 (416)
72 1erj_A Transcriptional repress 100.0 2.9E-32 1E-36 259.9 33.4 235 106-427 125-390 (393)
73 3mmy_A MRNA export factor; mRN 100.0 5.4E-32 1.8E-36 255.7 32.4 295 128-466 21-346 (368)
74 3frx_A Guanine nucleotide-bind 100.0 4.6E-31 1.6E-35 244.2 37.9 197 265-467 56-268 (319)
75 4g56_B MGC81050 protein; prote 100.0 3.6E-32 1.2E-36 255.5 28.5 236 102-428 92-345 (357)
76 2pm7_B Protein transport prote 100.0 6.3E-32 2.1E-36 247.4 29.0 243 101-385 6-284 (297)
77 3f3f_A Nucleoporin SEH1; struc 100.0 4.3E-32 1.5E-36 254.1 27.8 292 101-468 8-339 (351)
78 3bg1_A Protein SEC13 homolog; 100.0 1.4E-32 4.8E-37 254.0 23.2 241 101-425 10-292 (316)
79 3bg1_A Protein SEC13 homolog; 100.0 4.8E-32 1.6E-36 250.5 25.6 235 232-466 11-293 (316)
80 3mkq_A Coatomer beta'-subunit; 100.0 8.1E-31 2.8E-35 274.1 36.3 286 137-468 4-304 (814)
81 3dw8_B Serine/threonine-protei 100.0 2.7E-31 9.1E-36 258.1 30.3 310 103-464 27-444 (447)
82 3gre_A Serine/threonine-protei 100.0 3.5E-31 1.2E-35 256.6 30.6 267 111-468 34-361 (437)
83 2xzm_R RACK1; ribosome, transl 100.0 6.1E-30 2.1E-34 239.4 36.5 235 230-468 17-287 (343)
84 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-30 3.8E-35 249.4 29.5 290 102-455 13-350 (588)
85 3vu4_A KMHSV2; beta-propeller 100.0 2.4E-30 8.4E-35 243.0 31.6 288 130-469 3-339 (355)
86 3mmy_A MRNA export factor; mRN 100.0 6E-31 2E-35 248.5 26.2 278 101-424 36-344 (368)
87 3jrp_A Fusion protein of prote 100.0 6.1E-30 2.1E-34 242.7 32.4 224 242-466 21-287 (379)
88 3odt_A Protein DOA1; ubiquitin 100.0 8.6E-29 2.9E-33 228.3 37.6 219 242-468 27-257 (313)
89 3k26_A Polycomb protein EED; W 100.0 8.1E-31 2.8E-35 247.5 23.2 241 101-426 66-366 (366)
90 1sq9_A Antiviral protein SKI8; 100.0 2.3E-29 7.8E-34 240.5 32.8 242 225-467 7-323 (397)
91 3dm0_A Maltose-binding peripla 100.0 3.5E-29 1.2E-33 256.6 36.1 222 245-468 396-634 (694)
92 3jrp_A Fusion protein of prote 100.0 2E-29 6.8E-34 239.1 31.3 243 101-427 8-288 (379)
93 2j04_B YDR362CP, TAU91; beta p 100.0 8E-31 2.7E-35 256.7 21.8 225 241-467 170-429 (524)
94 2aq5_A Coronin-1A; WD40 repeat 100.0 3.6E-30 1.2E-34 246.6 25.9 270 108-467 38-343 (402)
95 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.2E-29 1.8E-33 242.0 34.2 325 105-467 5-392 (450)
96 1k8k_C P40, ARP2/3 complex 41 100.0 8E-29 2.7E-33 234.4 33.5 233 233-466 9-274 (372)
97 4gq1_A NUP37; propeller, trans 100.0 1.9E-29 6.7E-34 240.3 28.8 228 237-465 94-388 (393)
98 2w18_A PALB2, fancn, partner a 100.0 5.2E-29 1.8E-33 223.5 29.6 260 118-464 56-355 (356)
99 3lrv_A PRE-mRNA-splicing facto 100.0 2.3E-29 7.9E-34 235.5 28.6 268 108-464 40-331 (343)
100 4gga_A P55CDC, cell division c 100.0 6.6E-29 2.3E-33 239.1 31.7 248 102-441 145-410 (420)
101 4aez_A CDC20, WD repeat-contai 100.0 5.2E-28 1.8E-32 231.3 35.8 229 236-467 95-337 (401)
102 3dwl_C Actin-related protein 2 100.0 3.3E-30 1.1E-34 244.6 20.1 231 233-465 12-280 (377)
103 3i2n_A WD repeat-containing pr 100.0 1.1E-28 3.6E-33 232.2 28.4 247 102-429 63-356 (357)
104 3zwl_B Eukaryotic translation 100.0 5.1E-27 1.8E-31 221.5 38.8 235 232-468 30-306 (369)
105 3ei3_B DNA damage-binding prot 100.0 4.8E-28 1.6E-32 230.2 30.9 216 245-468 87-341 (383)
106 3jro_A Fusion protein of prote 100.0 1.1E-28 3.8E-33 254.4 27.2 226 242-468 19-287 (753)
107 3dw8_B Serine/threonine-protei 100.0 2.4E-28 8.3E-33 237.2 26.7 233 234-468 30-375 (447)
108 1l0q_A Surface layer protein; 100.0 2.6E-26 9E-31 218.8 40.3 300 116-468 2-344 (391)
109 4ggc_A P55CDC, cell division c 100.0 2.9E-27 9.8E-32 218.6 31.9 235 102-428 65-317 (318)
110 1yfq_A Cell cycle arrest prote 100.0 3.3E-27 1.1E-31 220.7 31.5 232 232-468 9-284 (342)
111 3jro_A Fusion protein of prote 100.0 2.8E-28 9.6E-33 251.3 26.2 242 101-426 6-285 (753)
112 2xyi_A Probable histone-bindin 100.0 2.2E-27 7.5E-32 229.0 29.9 234 234-467 130-411 (430)
113 2xyi_A Probable histone-bindin 100.0 2.4E-27 8.3E-32 228.7 28.9 246 100-426 124-410 (430)
114 3bws_A Protein LP49; two-domai 100.0 2.9E-26 9.9E-31 221.6 35.9 268 105-465 123-431 (433)
115 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-26 5.2E-31 217.1 32.5 227 233-468 20-273 (355)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.8E-26 9.7E-31 222.7 31.9 231 233-464 5-337 (450)
117 4e54_B DNA damage-binding prot 100.0 8.7E-27 3E-31 225.3 25.9 221 244-468 132-389 (435)
118 2aq5_A Coronin-1A; WD40 repeat 100.0 4.5E-27 1.6E-31 225.0 23.7 240 101-429 78-345 (402)
119 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-26 3.9E-31 221.9 24.4 254 144-465 13-296 (588)
120 4h5i_A Guanine nucleotide-exch 100.0 2.3E-26 8E-31 216.5 26.1 189 236-426 137-343 (365)
121 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-26 4.7E-31 216.6 23.9 221 242-468 46-294 (343)
122 1nir_A Nitrite reductase; hemo 99.9 4.1E-25 1.4E-29 218.0 30.8 313 109-468 142-516 (543)
123 1l0q_A Surface layer protein; 99.9 8.1E-24 2.8E-28 201.5 36.0 257 174-468 3-277 (391)
124 4gq1_A NUP37; propeller, trans 99.9 9.1E-26 3.1E-30 214.9 21.5 241 105-424 90-387 (393)
125 2w18_A PALB2, fancn, partner a 99.9 2.1E-24 7.2E-29 193.8 25.0 217 99-384 106-355 (356)
126 3f3f_A Nucleoporin SEH1; struc 99.9 2E-23 6.8E-28 195.1 26.9 201 268-468 5-251 (351)
127 3bws_A Protein LP49; two-domai 99.9 1.1E-21 3.9E-26 189.4 35.9 226 237-468 127-392 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 5E-22 1.7E-26 190.2 28.2 302 106-447 64-407 (415)
129 2ecf_A Dipeptidyl peptidase IV 99.9 2.8E-21 9.5E-26 199.8 29.1 314 104-467 36-460 (741)
130 1nir_A Nitrite reductase; hemo 99.9 1.7E-20 5.9E-25 185.1 32.9 267 171-470 147-462 (543)
131 1k32_A Tricorn protease; prote 99.9 3.7E-20 1.3E-24 198.0 31.8 220 236-465 248-501 (1045)
132 3u4y_A Uncharacterized protein 99.9 8.5E-19 2.9E-23 162.7 32.2 227 240-468 47-306 (331)
133 3vgz_A Uncharacterized protein 99.9 1.8E-18 6E-23 162.0 34.3 218 239-457 95-335 (353)
134 1xfd_A DIP, dipeptidyl aminope 99.9 6.4E-20 2.2E-24 189.0 26.6 306 103-454 15-428 (723)
135 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-19 4.4E-24 173.4 26.7 216 244-468 143-389 (415)
136 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-19 5.9E-24 185.3 28.5 307 107-468 28-437 (706)
137 1pby_B Quinohemoprotein amine 99.8 1.1E-18 3.7E-23 162.3 29.5 268 117-438 2-322 (337)
138 1ri6_A Putative isomerase YBHE 99.8 9.7E-18 3.3E-22 156.2 33.2 280 118-445 7-330 (343)
139 1k32_A Tricorn protease; prote 99.8 8.9E-19 3E-23 187.3 29.5 305 106-468 246-639 (1045)
140 1ri6_A Putative isomerase YBHE 99.8 8.2E-18 2.8E-22 156.7 29.5 229 234-465 39-307 (343)
141 2ojh_A Uncharacterized protein 99.8 2.8E-18 9.6E-23 156.1 21.7 212 241-457 50-293 (297)
142 2z3z_A Dipeptidyl aminopeptida 99.8 1.2E-17 4.2E-22 171.5 28.9 319 105-464 82-474 (706)
143 2ecf_A Dipeptidyl peptidase IV 99.8 5.5E-18 1.9E-22 175.1 24.5 296 146-466 36-413 (741)
144 1pby_B Quinohemoprotein amine 99.8 8.3E-18 2.9E-22 156.2 22.9 257 175-468 3-312 (337)
145 3o4h_A Acylamino-acid-releasin 99.8 1.1E-17 3.8E-22 167.7 24.4 265 105-426 22-315 (582)
146 1z68_A Fibroblast activation p 99.8 5.6E-18 1.9E-22 174.4 21.6 313 108-468 19-445 (719)
147 1jmx_B Amine dehydrogenase; ox 99.8 2.1E-16 7.3E-21 147.5 28.5 276 109-436 4-335 (349)
148 2oit_A Nucleoporin 214KDA; NH2 99.8 9.6E-16 3.3E-20 147.0 30.6 203 106-345 38-280 (434)
149 3vgz_A Uncharacterized protein 99.8 1.5E-15 5.1E-20 142.0 30.8 227 236-468 44-305 (353)
150 3scy_A Hypothetical bacterial 99.8 3.5E-15 1.2E-19 140.1 33.1 290 113-445 10-359 (361)
151 2oit_A Nucleoporin 214KDA; NH2 99.8 2.6E-17 9E-22 157.9 18.5 208 254-468 23-280 (434)
152 3hfq_A Uncharacterized protein 99.8 2.5E-15 8.7E-20 140.2 31.6 231 235-466 42-317 (347)
153 3hfq_A Uncharacterized protein 99.8 5.9E-15 2E-19 137.7 34.0 264 124-430 14-323 (347)
154 3scy_A Hypothetical bacterial 99.7 1.2E-14 4.1E-19 136.4 33.4 233 233-466 50-337 (361)
155 1jmx_B Amine dehydrogenase; ox 99.7 4.6E-16 1.6E-20 145.2 23.5 222 240-468 7-327 (349)
156 1xfd_A DIP, dipeptidyl aminope 99.7 2.2E-16 7.4E-21 162.7 22.7 266 171-467 26-394 (723)
157 2oiz_A Aromatic amine dehydrog 99.7 1E-14 3.6E-19 136.4 32.0 284 113-445 12-355 (361)
158 2ojh_A Uncharacterized protein 99.7 9.2E-16 3.2E-20 139.3 23.0 212 250-468 18-260 (297)
159 3q7m_A Lipoprotein YFGL, BAMB; 99.7 1.1E-14 3.9E-19 137.4 31.2 296 115-463 52-375 (376)
160 4a5s_A Dipeptidyl peptidase 4 99.7 5.9E-15 2E-19 152.0 28.2 315 104-467 16-450 (740)
161 3u4y_A Uncharacterized protein 99.7 1.1E-14 3.7E-19 134.9 27.1 222 242-469 7-255 (331)
162 3pe7_A Oligogalacturonate lyas 99.7 9.9E-15 3.4E-19 138.4 27.1 221 240-466 88-382 (388)
163 3o4h_A Acylamino-acid-releasin 99.7 3.1E-15 1.1E-19 149.9 22.7 224 234-464 23-274 (582)
164 3azo_A Aminopeptidase; POP fam 99.6 2E-13 6.9E-18 139.0 27.2 318 104-465 23-410 (662)
165 1z68_A Fibroblast activation p 99.6 1.5E-14 5.2E-19 148.8 18.4 295 106-434 61-451 (719)
166 3q7m_A Lipoprotein YFGL, BAMB; 99.6 1E-12 3.5E-17 124.0 28.5 227 240-468 99-339 (376)
167 1jof_A Carboxy-CIS,CIS-muconat 99.6 1E-12 3.5E-17 123.4 27.6 232 234-467 41-342 (365)
168 3c5m_A Oligogalacturonate lyas 99.6 2.5E-13 8.5E-18 129.0 23.3 286 130-465 14-381 (396)
169 1jof_A Carboxy-CIS,CIS-muconat 99.6 4.9E-12 1.7E-16 118.7 30.5 266 118-427 4-342 (365)
170 3fvz_A Peptidyl-glycine alpha- 99.6 8.3E-12 2.8E-16 115.3 31.4 232 235-467 26-323 (329)
171 1qks_A Cytochrome CD1 nitrite 99.6 1.1E-11 3.9E-16 121.9 33.1 311 112-468 163-540 (567)
172 1q7f_A NHL, brain tumor CG1071 99.6 1.1E-11 3.8E-16 112.0 30.8 222 238-466 35-280 (286)
173 3no2_A Uncharacterized protein 99.6 5.6E-12 1.9E-16 112.9 27.7 206 243-453 4-230 (276)
174 2dg1_A DRP35, lactonase; beta 99.6 1.7E-11 5.7E-16 113.5 31.9 210 241-456 53-300 (333)
175 2bkl_A Prolyl endopeptidase; m 99.5 2.3E-12 7.9E-17 131.7 28.1 274 111-429 74-400 (695)
176 2oiz_A Aromatic amine dehydrog 99.5 1.3E-12 4.3E-17 122.2 23.8 226 237-467 54-335 (361)
177 3fvz_A Peptidyl-glycine alpha- 99.5 5.5E-12 1.9E-16 116.5 27.8 246 105-386 24-322 (329)
178 3azo_A Aminopeptidase; POP fam 99.5 1.6E-12 5.5E-17 132.3 26.3 222 242-467 88-370 (662)
179 2gop_A Trilobed protease; beta 99.5 8.5E-12 2.9E-16 116.2 28.5 214 239-465 65-330 (347)
180 4a5s_A Dipeptidyl peptidase 4 99.5 1.4E-12 4.9E-17 134.2 22.9 264 171-465 26-397 (740)
181 3sjl_D Methylamine dehydrogena 99.5 3.6E-11 1.2E-15 111.0 29.8 281 108-436 36-373 (386)
182 3no2_A Uncharacterized protein 99.5 1.9E-11 6.4E-16 109.5 26.5 227 115-436 4-262 (276)
183 1q7f_A NHL, brain tumor CG1071 99.5 2.2E-11 7.6E-16 110.0 27.2 234 105-387 30-281 (286)
184 3dsm_A Uncharacterized protein 99.5 8.6E-12 3E-16 115.0 24.4 269 123-445 14-319 (328)
185 3c5m_A Oligogalacturonate lyas 99.5 4E-12 1.4E-16 120.6 22.5 286 107-429 38-387 (396)
186 3hxj_A Pyrrolo-quinoline quino 99.5 1.1E-11 3.9E-16 114.4 24.0 291 116-467 30-325 (330)
187 2mad_H Methylamine dehydrogena 99.5 5.8E-10 2E-14 104.3 35.3 280 111-433 27-357 (373)
188 2xdw_A Prolyl endopeptidase; a 99.5 1.4E-10 4.7E-15 118.9 33.9 227 238-468 130-416 (710)
189 1qks_A Cytochrome CD1 nitrite 99.4 1.5E-10 5.3E-15 113.8 31.1 264 172-467 166-478 (567)
190 3dsm_A Uncharacterized protein 99.4 1.8E-10 6.3E-15 106.1 28.6 217 241-465 50-301 (328)
191 2xdw_A Prolyl endopeptidase; a 99.4 8.9E-11 3.1E-15 120.3 27.7 251 106-428 126-416 (710)
192 3e5z_A Putative gluconolactona 99.4 2.3E-10 7.8E-15 103.9 26.5 219 236-466 31-286 (296)
193 2z2n_A Virginiamycin B lyase; 99.4 3.4E-09 1.2E-13 96.0 34.1 271 105-427 15-296 (299)
194 1rwi_B Serine/threonine-protei 99.4 9.7E-11 3.3E-15 104.7 22.9 228 237-468 28-266 (270)
195 2z2n_A Virginiamycin B lyase; 99.4 7E-09 2.4E-13 93.9 35.3 221 238-466 62-295 (299)
196 2gop_A Trilobed protease; beta 99.4 1.7E-10 6E-15 107.2 24.9 258 105-438 59-341 (347)
197 3pe7_A Oligogalacturonate lyas 99.4 8.2E-11 2.8E-15 111.3 21.2 225 239-468 42-331 (388)
198 1kb0_A Quinohemoprotein alcoho 99.3 6.8E-10 2.3E-14 112.2 28.5 225 243-469 127-510 (677)
199 1yr2_A Prolyl oligopeptidase; 99.3 8.2E-10 2.8E-14 113.6 29.7 227 238-468 168-443 (741)
200 2mad_H Methylamine dehydrogena 99.3 6.9E-09 2.3E-13 97.0 33.0 230 237-470 70-354 (373)
201 1yiq_A Quinohemoprotein alcoho 99.3 3.6E-09 1.2E-13 107.2 32.9 304 115-450 69-532 (689)
202 3e5z_A Putative gluconolactona 99.3 4.2E-10 1.4E-14 102.1 23.6 232 107-389 30-289 (296)
203 2hz6_A Endoplasmic reticulum t 99.3 1.6E-14 5.4E-19 135.5 -6.2 210 246-465 51-278 (369)
204 1rwi_B Serine/threonine-protei 99.3 2.1E-10 7.1E-15 102.5 20.6 235 106-388 25-266 (270)
205 2bkl_A Prolyl endopeptidase; m 99.3 1.1E-10 3.7E-15 119.3 19.9 225 237-468 125-399 (695)
206 3c75_H MADH, methylamine dehyd 99.3 3.1E-09 1.1E-13 100.0 27.9 275 111-433 79-409 (426)
207 1yr2_A Prolyl oligopeptidase; 99.3 5.8E-10 2E-14 114.8 23.9 179 254-434 243-448 (741)
208 3sjl_D Methylamine dehydrogena 99.3 5.9E-09 2E-13 96.3 27.8 227 238-468 83-365 (386)
209 1xip_A Nucleoporin NUP159; bet 99.3 5.1E-10 1.7E-14 103.8 20.0 168 234-412 39-230 (388)
210 1xip_A Nucleoporin NUP159; bet 99.2 6.3E-10 2.2E-14 103.2 20.1 164 278-452 43-230 (388)
211 1yiq_A Quinohemoprotein alcoho 99.2 1.4E-09 4.7E-14 110.2 23.6 227 242-469 119-508 (689)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.2E-08 4E-13 93.2 27.8 225 237-467 22-300 (314)
213 2qc5_A Streptogramin B lactona 99.2 1.2E-07 4.1E-12 85.7 33.5 213 243-464 72-298 (300)
214 2hz6_A Endoplasmic reticulum t 99.2 6E-12 2E-16 117.9 3.6 190 243-442 8-207 (369)
215 1kb0_A Quinohemoprotein alcoho 99.2 2.8E-08 9.7E-13 100.4 30.7 184 283-466 253-567 (677)
216 2dg1_A DRP35, lactonase; beta 99.2 5.9E-09 2E-13 96.2 23.4 221 240-466 13-263 (333)
217 1kv9_A Type II quinohemoprotei 99.2 7.5E-08 2.6E-12 97.3 32.0 320 115-467 65-553 (668)
218 3hxj_A Pyrrolo-quinoline quino 99.1 7.5E-10 2.6E-14 102.1 15.5 209 244-464 70-282 (330)
219 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 5.3E-08 1.8E-12 88.9 27.0 177 247-426 85-299 (314)
220 3c75_H MADH, methylamine dehyd 99.1 4.8E-08 1.7E-12 91.9 26.6 230 237-469 122-405 (426)
221 3hrp_A Uncharacterized protein 99.1 5.4E-08 1.8E-12 92.2 26.6 225 237-464 135-408 (409)
222 3iuj_A Prolyl endopeptidase; h 99.1 5.9E-08 2E-12 98.9 26.0 174 254-429 208-408 (693)
223 2ad6_A Methanol dehydrogenase 99.0 3.8E-07 1.3E-11 90.2 30.5 225 243-469 114-497 (571)
224 3g4e_A Regucalcin; six bladed 99.0 8.7E-07 3E-11 80.1 30.5 210 238-454 18-260 (297)
225 1w6s_A Methanol dehydrogenase 99.0 8.3E-07 2.9E-11 87.7 32.4 286 116-436 62-513 (599)
226 2qc5_A Streptogramin B lactona 99.0 1.4E-06 4.8E-11 78.6 31.7 222 237-465 24-259 (300)
227 3iuj_A Prolyl endopeptidase; h 99.0 1.2E-07 4.1E-12 96.6 25.7 226 238-467 134-406 (693)
228 1mda_H Methylamine dehydrogena 98.9 1.2E-07 4.1E-12 87.7 21.3 270 127-445 47-364 (368)
229 1kv9_A Type II quinohemoprotei 98.9 1.8E-07 6.1E-12 94.5 23.8 226 243-469 116-491 (668)
230 1w6s_A Methanol dehydrogenase 98.9 1.1E-06 3.7E-11 86.9 28.0 223 246-469 123-506 (599)
231 2ghs_A AGR_C_1268P; regucalcin 98.9 7.5E-06 2.6E-10 75.0 32.0 207 238-455 54-291 (326)
232 3hrp_A Uncharacterized protein 98.9 7.7E-07 2.6E-11 84.3 25.6 181 238-424 176-408 (409)
233 4a2l_A BT_4663, two-component 98.9 1.6E-05 5.6E-10 82.3 36.7 317 107-467 175-527 (795)
234 3g4e_A Regucalcin; six bladed 98.9 5.2E-06 1.8E-10 75.0 28.9 167 236-406 57-249 (297)
235 1flg_A Protein (quinoprotein e 98.8 2.3E-06 8E-11 84.6 27.8 226 243-469 116-519 (582)
236 4a2l_A BT_4663, two-component 98.8 1.8E-05 6.2E-10 82.0 35.4 222 244-467 225-481 (795)
237 3nol_A Glutamine cyclotransfer 98.8 4.1E-06 1.4E-10 72.2 24.1 186 265-455 32-244 (262)
238 2ad6_A Methanol dehydrogenase 98.8 7.3E-06 2.5E-10 81.0 29.5 142 295-436 273-504 (571)
239 2iwa_A Glutamine cyclotransfer 98.8 9.6E-06 3.3E-10 70.8 26.4 190 237-427 25-238 (266)
240 2qe8_A Uncharacterized protein 98.8 5.5E-07 1.9E-11 83.3 19.0 193 253-462 92-317 (343)
241 3dr2_A Exported gluconolactona 98.7 2.7E-06 9.2E-11 77.2 22.8 209 238-458 50-299 (305)
242 3nol_A Glutamine cyclotransfer 98.7 1E-05 3.5E-10 69.8 24.6 174 239-414 49-243 (262)
243 3nok_A Glutaminyl cyclase; bet 98.7 1.1E-05 3.9E-10 69.5 24.7 174 239-414 59-254 (268)
244 2iwa_A Glutamine cyclotransfer 98.7 1.3E-05 4.5E-10 69.9 25.5 199 265-467 10-238 (266)
245 3nok_A Glutaminyl cyclase; bet 98.7 4.3E-06 1.5E-10 72.1 21.8 184 265-454 44-253 (268)
246 1mda_H Methylamine dehydrogena 98.7 2.1E-06 7.2E-11 79.4 20.9 223 237-468 69-348 (368)
247 3v9f_A Two-component system se 98.7 6.5E-05 2.2E-09 77.7 34.5 232 235-467 258-525 (781)
248 3dr2_A Exported gluconolactona 98.7 4.4E-06 1.5E-10 75.8 22.0 118 294-418 169-299 (305)
249 2ghs_A AGR_C_1268P; regucalcin 98.7 5.3E-05 1.8E-09 69.3 29.1 169 240-414 97-290 (326)
250 3mbr_X Glutamine cyclotransfer 98.6 3.3E-05 1.1E-09 66.0 24.7 186 265-455 10-223 (243)
251 3mbr_X Glutamine cyclotransfer 98.6 4.5E-05 1.5E-09 65.2 25.2 175 238-413 24-222 (243)
252 3v9f_A Two-component system se 98.6 9.4E-05 3.2E-09 76.5 32.7 231 235-467 313-569 (781)
253 2p64_A F-BOX/WD repeat protein 98.4 1.5E-07 5E-12 56.4 3.1 51 54-104 2-52 (52)
254 2ece_A 462AA long hypothetical 98.3 0.00047 1.6E-08 64.3 26.1 161 253-414 163-399 (462)
255 1npe_A Nidogen, entactin; glyc 98.3 0.0014 4.7E-08 57.8 29.2 217 246-468 3-240 (267)
256 2ece_A 462AA long hypothetical 98.3 0.00061 2.1E-08 63.6 25.5 209 243-454 94-399 (462)
257 1k3i_A Galactose oxidase precu 98.3 8.4E-05 2.9E-09 75.1 20.9 173 242-415 296-530 (656)
258 2fp8_A Strictosidine synthase; 98.2 0.00075 2.6E-08 61.4 25.1 224 238-467 24-314 (322)
259 2qe8_A Uncharacterized protein 98.2 1.8E-05 6.1E-10 73.1 13.8 212 236-465 20-277 (343)
260 1flg_A Protein (quinoprotein e 98.2 0.00027 9.2E-09 69.9 22.7 192 244-435 68-364 (582)
261 1k3i_A Galactose oxidase precu 98.2 0.00032 1.1E-08 70.8 23.2 218 238-455 248-530 (656)
262 1npe_A Nidogen, entactin; glyc 98.1 0.0041 1.4E-07 54.7 28.0 204 238-445 41-258 (267)
263 2vpj_A Kelch-like protein 12; 98.1 0.00055 1.9E-08 61.6 20.4 224 243-467 14-279 (301)
264 1fwx_A Nitrous oxide reductase 98.1 0.0007 2.4E-08 65.5 21.4 222 243-467 100-432 (595)
265 2xn4_A Kelch-like protein 2; s 98.0 0.00092 3.1E-08 60.2 21.4 224 243-467 15-277 (302)
266 2vpj_A Kelch-like protein 12; 98.0 0.0018 6.1E-08 58.2 21.5 188 240-428 59-280 (301)
267 3ii7_A Kelch-like protein 7; p 97.9 0.0014 4.8E-08 59.0 20.6 222 245-467 13-273 (306)
268 3v65_B Low-density lipoprotein 97.9 0.015 5.1E-07 54.2 28.6 217 246-467 89-319 (386)
269 1fwx_A Nitrous oxide reductase 97.9 0.0035 1.2E-07 60.8 23.0 217 247-466 18-361 (595)
270 3v64_C Agrin; beta propeller, 97.8 0.017 6E-07 52.9 26.7 155 237-394 120-283 (349)
271 3v65_B Low-density lipoprotein 97.8 0.023 7.9E-07 52.9 26.8 205 238-445 121-337 (386)
272 2fp8_A Strictosidine synthase; 97.8 0.019 6.6E-07 51.9 26.0 127 293-425 164-312 (322)
273 2xn4_A Kelch-like protein 2; s 97.8 0.0043 1.5E-07 55.7 21.1 187 241-428 59-278 (302)
274 2uvk_A YJHT; unknown function, 97.8 0.0052 1.8E-07 56.7 21.8 227 241-468 17-344 (357)
275 3ii7_A Kelch-like protein 7; p 97.7 0.0065 2.2E-07 54.6 21.5 188 240-428 52-274 (306)
276 1zgk_A Kelch-like ECH-associat 97.7 0.0026 8.9E-08 57.4 17.7 227 240-467 21-288 (308)
277 4asc_A Kelch repeat and BTB do 97.7 0.0087 3E-07 54.1 21.2 218 247-467 8-278 (315)
278 3v64_C Agrin; beta propeller, 97.6 0.037 1.3E-06 50.7 29.3 216 246-467 46-276 (349)
279 2xzh_A Clathrin heavy chain 1; 97.6 0.034 1.1E-06 49.3 32.2 222 239-467 73-333 (365)
280 2xe4_A Oligopeptidase B; hydro 97.5 0.0043 1.5E-07 63.5 18.6 104 238-341 276-398 (751)
281 3amr_A 3-phytase; beta-propell 97.4 0.062 2.1E-06 48.5 24.4 177 284-465 40-262 (355)
282 2woz_A Kelch repeat and BTB do 97.4 0.038 1.3E-06 49.8 22.0 219 246-467 18-288 (318)
283 1bpo_A Protein (clathrin); cla 97.4 0.079 2.7E-06 49.0 33.6 222 239-467 72-332 (494)
284 2p4o_A Hypothetical protein; p 97.4 0.073 2.5E-06 47.7 27.8 218 237-457 36-279 (306)
285 1zgk_A Kelch-like ECH-associat 97.4 0.019 6.5E-07 51.6 19.1 187 241-428 68-289 (308)
286 3qhy_B Beta-lactamase inhibito 97.3 0.039 1.3E-06 48.8 20.1 222 237-468 26-248 (282)
287 2be1_A Serine/threonine-protei 97.3 0.00076 2.6E-08 61.0 8.9 184 245-431 11-236 (339)
288 3ei3_A DNA damage-binding prot 97.2 0.33 1.1E-05 51.9 36.9 127 335-465 808-954 (1158)
289 2p4o_A Hypothetical protein; p 97.2 0.12 4.1E-06 46.2 26.9 177 238-416 77-278 (306)
290 1ijq_A LDL receptor, low-densi 97.2 0.13 4.4E-06 46.3 28.9 227 126-394 10-246 (316)
291 2uvk_A YJHT; unknown function, 97.1 0.074 2.5E-06 48.8 20.8 191 241-432 63-348 (357)
292 1ijq_A LDL receptor, low-densi 97.1 0.14 4.8E-06 46.1 29.8 209 253-467 9-239 (316)
293 3ott_A Two-component system se 97.1 0.2 6.9E-06 51.3 25.8 228 234-467 21-261 (758)
294 3m0c_C LDL receptor, low-densi 97.1 0.31 1.1E-05 49.8 28.8 212 252-467 402-633 (791)
295 3p5b_L Low density lipoprotein 97.0 0.21 7.4E-06 46.6 31.5 244 118-403 85-337 (400)
296 4asc_A Kelch repeat and BTB do 97.0 0.034 1.2E-06 50.1 17.0 188 240-428 42-279 (315)
297 3ei3_A DNA damage-binding prot 97.0 0.51 1.8E-05 50.5 36.3 307 117-468 524-915 (1158)
298 3tc9_A Hypothetical hydrolase; 97.0 0.2 6.9E-06 47.3 22.5 224 236-465 140-429 (430)
299 3p5b_L Low density lipoprotein 97.0 0.24 8.3E-06 46.2 30.9 213 252-468 90-322 (400)
300 2be1_A Serine/threonine-protei 96.9 0.0046 1.6E-07 55.9 10.0 143 284-428 10-185 (339)
301 3m0c_C LDL receptor, low-densi 96.9 0.45 1.6E-05 48.6 29.8 158 236-394 474-640 (791)
302 2xe4_A Oligopeptidase B; hydro 96.8 0.057 1.9E-06 55.3 18.2 130 335-464 248-398 (751)
303 3sov_A LRP-6, low-density lipo 96.7 0.3 1E-05 43.9 27.5 155 237-394 83-246 (318)
304 2woz_A Kelch repeat and BTB do 96.7 0.1 3.5E-06 47.0 17.7 188 240-428 53-289 (318)
305 1n7d_A LDL receptor, low-densi 96.7 0.014 4.7E-07 59.1 12.7 205 238-445 411-633 (699)
306 3amr_A 3-phytase; beta-propell 96.7 0.33 1.1E-05 43.8 25.8 187 243-434 39-272 (355)
307 3ott_A Two-component system se 96.7 0.7 2.4E-05 47.3 28.7 219 237-462 65-303 (758)
308 3sov_A LRP-6, low-density lipo 96.7 0.34 1.2E-05 43.5 28.5 212 253-468 12-240 (318)
309 1xi4_A Clathrin heavy chain; a 96.6 0.16 5.4E-06 54.4 19.5 220 240-466 73-331 (1630)
310 1n7d_A LDL receptor, low-densi 96.6 0.019 6.5E-07 58.1 12.7 157 238-395 458-623 (699)
311 3s94_A LRP-6, low-density lipo 96.4 0.84 2.9E-05 45.3 31.3 231 236-467 174-468 (619)
312 3s94_A LRP-6, low-density lipo 96.3 1 3.4E-05 44.7 31.4 317 107-467 42-424 (619)
313 2xbg_A YCF48-like protein; pho 96.3 0.61 2.1E-05 42.0 31.4 219 239-464 84-320 (327)
314 2xbg_A YCF48-like protein; pho 96.2 0.63 2.2E-05 41.9 28.8 175 243-424 132-320 (327)
315 3qhy_B Beta-lactamase inhibito 96.2 0.32 1.1E-05 42.8 16.9 186 276-470 25-211 (282)
316 2zwa_A Leucine carboxyl methyl 96.1 0.3 1E-05 49.3 18.2 188 242-429 396-638 (695)
317 4a0p_A LRP6, LRP-6, low-densit 96.1 1.3 4.4E-05 44.0 29.0 191 238-433 42-244 (628)
318 3qqz_A Putative uncharacterize 96.0 0.64 2.2E-05 40.0 25.5 192 269-463 21-250 (255)
319 4hw6_A Hypothetical protein, I 96.0 1.1 3.6E-05 42.3 23.5 223 237-465 143-432 (433)
320 2xzh_A Clathrin heavy chain 1; 96.0 0.8 2.7E-05 40.7 29.2 207 254-468 49-292 (365)
321 2p9w_A MAL S 1 allergenic prot 95.7 1.1 3.6E-05 40.1 20.9 189 276-465 14-264 (334)
322 3qqz_A Putative uncharacterize 95.7 0.93 3.2E-05 39.0 23.2 185 238-425 32-252 (255)
323 3kci_A Probable E3 ubiquitin-p 95.6 1.4 4.7E-05 40.8 30.0 231 237-467 55-346 (389)
324 2zwa_A Leucine carboxyl methyl 95.5 0.83 2.8E-05 46.1 18.5 185 282-467 396-636 (695)
325 3mvd_K Regulator of chromosome 95.5 1.7 5.9E-05 40.7 37.9 231 236-467 76-375 (423)
326 4d9s_A UVB-resistance protein 95.2 2 6.9E-05 40.0 32.5 233 234-466 15-305 (406)
327 1bpo_A Protein (clathrin); cla 94.9 2.5 8.5E-05 39.3 29.9 209 253-468 47-291 (494)
328 4a0p_A LRP6, LRP-6, low-densit 94.5 4.1 0.00014 40.4 39.2 92 375-467 360-466 (628)
329 3kci_A Probable E3 ubiquitin-p 94.2 3.5 0.00012 38.1 28.4 191 236-426 108-345 (389)
330 3of7_A Regulator of chromosome 93.8 4.8 0.00017 38.3 32.3 232 234-466 66-405 (473)
331 1a12_A RCC1, regulator of chro 93.6 4.7 0.00016 37.6 34.9 229 235-466 59-365 (413)
332 3tc9_A Hypothetical hydrolase; 93.5 4.4 0.00015 38.0 17.5 144 317-466 139-301 (430)
333 3kya_A Putative phosphatase; s 93.4 5.5 0.00019 37.9 24.9 229 236-468 142-477 (496)
334 1xi4_A Clathrin heavy chain; a 93.2 3.6 0.00012 44.4 17.1 167 235-403 106-306 (1630)
335 4d9s_A UVB-resistance protein 93.1 5.5 0.00019 37.0 39.7 232 236-467 69-358 (406)
336 2p9w_A MAL S 1 allergenic prot 92.0 6.4 0.00022 35.1 23.5 189 239-427 19-266 (334)
337 3mvd_K Regulator of chromosome 90.9 10 0.00035 35.3 36.0 191 236-426 128-374 (423)
338 4hw6_A Hypothetical protein, I 89.0 15 0.00051 34.4 20.2 145 277-425 141-303 (433)
339 3of7_A Regulator of chromosome 88.6 17 0.00058 34.5 25.9 188 235-425 148-404 (473)
340 3f7f_A Nucleoporin NUP120; nuc 86.4 11 0.00037 37.6 13.2 71 398-468 222-307 (729)
341 3pbp_A Nucleoporin NUP82; beta 85.6 23 0.00078 32.9 18.8 142 239-382 27-208 (452)
342 3pbp_A Nucleoporin NUP82; beta 85.2 24 0.00081 32.8 18.5 127 333-461 40-207 (452)
343 3f7f_A Nucleoporin NUP120; nuc 84.9 15 0.00053 36.5 13.5 69 358-426 222-305 (729)
344 3kya_A Putative phosphatase; s 81.4 38 0.0013 32.2 17.4 148 317-466 141-341 (496)
345 3s25_A Hypothetical 7-bladed b 80.4 30 0.001 30.4 26.7 210 241-467 22-256 (302)
346 1a12_A RCC1, regulator of chro 80.1 37 0.0013 31.3 33.6 188 236-425 112-364 (413)
347 4gq2_M Nucleoporin NUP120; bet 70.1 45 0.0015 34.9 12.6 36 359-394 237-274 (950)
348 2ism_A Putative oxidoreductase 67.7 69 0.0024 28.7 23.5 65 237-304 35-115 (352)
349 4fhn_B Nucleoporin NUP120; pro 56.2 2.1E+02 0.0073 30.6 16.1 29 366-394 248-276 (1139)
350 3a9g_A Putative uncharacterize 52.4 1.3E+02 0.0044 26.9 21.9 48 107-156 31-82 (354)
351 1cru_A Protein (soluble quinop 51.8 1.5E+02 0.0053 27.6 13.0 50 107-156 29-86 (454)
352 3sre_A PON1, serum paraoxonase 49.9 1.4E+02 0.005 26.7 18.7 131 332-466 81-252 (355)
353 2g8s_A Glucose/sorbosone dehyd 49.8 1.4E+02 0.0049 26.6 17.6 28 107-134 20-47 (353)
354 3sbq_A Nitrous-oxide reductase 49.6 91 0.0031 30.2 9.4 92 362-454 329-453 (638)
355 4fhn_B Nucleoporin NUP120; pro 49.5 9.2 0.00032 41.0 3.2 38 106-143 239-276 (1139)
356 4gq2_M Nucleoporin NUP120; bet 47.1 10 0.00034 39.8 3.0 38 106-143 237-274 (950)
357 3uc1_A DNA gyrase subunit A; D 46.8 1.5E+02 0.0053 26.2 16.2 180 285-466 4-228 (327)
358 2ism_A Putative oxidoreductase 45.0 1.7E+02 0.0058 26.1 21.7 66 276-344 32-115 (352)
359 1tl2_A L10, protein (tachylect 40.6 67 0.0023 26.8 6.3 28 106-135 42-69 (236)
360 3sbq_A Nitrous-oxide reductase 33.5 1.6E+02 0.0056 28.5 8.4 119 295-414 299-453 (638)
361 3s25_A Hypothetical 7-bladed b 31.4 2.6E+02 0.0089 24.3 27.7 211 238-465 58-292 (302)
362 1tl2_A L10, protein (tachylect 30.5 2.4E+02 0.0081 23.5 13.0 100 234-338 42-158 (236)
363 1suu_A DNA gyrase subunit A; t 25.9 3.3E+02 0.011 23.7 19.7 180 283-466 7-231 (312)
364 4hvt_A Ritya.17583.B, post-pro 22.1 6E+02 0.02 25.4 23.8 96 332-428 318-431 (711)
365 3sre_A PON1, serum paraoxonase 21.6 4.4E+02 0.015 23.6 21.9 129 253-385 138-297 (355)
366 3das_A Putative oxidoreductase 21.3 4.4E+02 0.015 23.5 23.8 50 107-156 34-89 (347)
No 1
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.2e-43 Score=338.69 Aligned_cols=314 Identities=34% Similarity=0.598 Sum_probs=279.9
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
.|...+.. ++++++++|++|+.||.|++||+.+++.+..+.+|...|.+++|++ ..+++++.
T Consensus 116 ~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-----------------~~l~s~~~ 177 (445)
T 2ovr_B 116 GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD-----------------NIIISGST 177 (445)
T ss_dssp CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET-----------------TEEEEEET
T ss_pred ccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC-----------------CEEEEEeC
Confidence 34444433 3456799999999999999999999999999999999999999954 35778888
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR 261 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~ 261 (486)
||+|++||+.++... . ....+...+.++.++++.+++|+.||.|++||+
T Consensus 178 dg~i~vwd~~~~~~~----------------------------~---~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~ 226 (445)
T 2ovr_B 178 DRTLKVWNAETGECI----------------------------H---TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 226 (445)
T ss_dssp TSCEEEEETTTTEEE----------------------------E---EECCCSSCEEEEEEETTEEEEEETTSEEEEEES
T ss_pred CCeEEEEECCcCcEE----------------------------E---EECCCCCcEEEEEecCCEEEEEeCCCEEEEEEC
Confidence 999999998553211 1 123566778899999999999999999999999
Q ss_pred CCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEEC
Q psy9182 262 VSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM 341 (486)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~ 341 (486)
.+++.+..+.+|...|.++.++++++++|+.||.|++||+++++.+..+..|...+.++.+++..+++++.||.|++||+
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~ 306 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDV 306 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred CCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcC---CcccEEEEEeCCCEEEEEeCCCc
Q psy9182 342 VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSGSSDNT 418 (486)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~dg~ 418 (486)
++++.. ..+.+|...+.++.++++++++++.||.|++||+++++.+..+.. |...|.++.++++++++|+.||.
T Consensus 307 ~~~~~~---~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~ 383 (445)
T 2ovr_B 307 ETGNCI---HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT 383 (445)
T ss_dssp TTCCEE---EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSE
T ss_pred CCCCEE---EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCe
Confidence 988754 556688999999999999999999999999999999999999986 88899999999999999999999
Q ss_pred EEEEECCCCeeeEEe-----cCcccCeEEEEe--cCCEEEEEeCCCc----EEEEeCCCC
Q psy9182 419 IRLWDIECGACLRVL-----EGHEELVRCIRF--DAKRIVSGAYDGK----IKVWNLVAA 467 (486)
Q Consensus 419 v~iwd~~~~~~~~~~-----~~h~~~v~~~~~--~~~~l~s~~~dg~----v~iwdl~~~ 467 (486)
|++||+.+++.+..+ .+|.+.|++++| ++.+|++|+.||+ |.+||++..
T Consensus 384 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 384 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 999999999999888 578889999999 6778999999998 999999854
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-43 Score=336.58 Aligned_cols=276 Identities=30% Similarity=0.560 Sum_probs=250.6
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
..|...|.++.|+|++.+|++|+.||+|+|||+.+++.+.++.+|...|.+++|+
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~------------------------- 159 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD------------------------- 159 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEEC-------------------------
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEc-------------------------
Confidence 4678899999999999999999999999999999999999999999999999885
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
+++++|++|+.||+|++||
T Consensus 160 -------------------------------------------------------------~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 160 -------------------------------------------------------------HSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp -------------------------------------------------------------TTSSEEEEEETTSCCCEEE
T ss_pred -------------------------------------------------------------CCCCEEEEEeCCCeEEEEe
Confidence 2455677777888888888
Q ss_pred CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcE
Q psy9182 261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSI 336 (486)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i 336 (486)
+.+++++..+.+|...|.+++| +++++++|+.|++|++||++++.++..+.+|...|.++.++++ .+++|+.|+.|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 8778888888899999999999 7889999999999999999999999999999999999999864 89999999999
Q ss_pred EEEECCCCCceeeEEeeecCcccEEEEEeC----------------------CCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFD----------------------EKYIVSASGDRTIKVWNTSSCEFVRTLN 394 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~----------------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 394 (486)
++||+.+++.. ..+.+|...|.++.|. +.++++|+.|+.|++||+++++++..+.
T Consensus 259 ~vwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 259 RVWVVATKECK---AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp EEEETTTCCEE---EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCcee---eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence 99999887654 4567899999999983 5689999999999999999999999999
Q ss_pred CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 395 GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 395 ~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
+|...|.++.++ +++|++|+.||.|++||+.+++++..+.+|...|++++| ++.+|++|+.||+|++|+++
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999985 789999999999999999999999999999999999999 77899999999999999964
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7e-41 Score=336.59 Aligned_cols=323 Identities=32% Similarity=0.569 Sum_probs=273.3
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceecc--------
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYR-------- 171 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~-------- 171 (486)
.|...+.+++++|++++|++++.||.|++||. +++.+..+.+|...|.+++|. ++.+++++.|+.+++|
T Consensus 219 ~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~ 297 (577)
T 2ymu_A 219 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQ 297 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE
T ss_pred cCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEE
Confidence 45677889999999999999999999999996 478889999999999999996 3467777777766653
Q ss_pred ----------------CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCcc
Q psy9182 172 ----------------DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSK 235 (486)
Q Consensus 172 ----------------~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (486)
++..+++++.|+.|++||.... ....+.. .....
T Consensus 298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-----------------------------~~~~~~~-~~~~v 347 (577)
T 2ymu_A 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-----------------------------HLQTLTG-HSSSV 347 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-----------------------------EEEEECC-CSSCE
T ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----------------------------eeEEEeC-CCCCE
Confidence 3456777777777777775321 1111211 11223
Q ss_pred ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH 313 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 313 (486)
..++++++++++++|+.||.|++||. +++.+..+.+|...|.++++ ++++|++++.|+.|++||. +++.+..+..|
T Consensus 348 ~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~ 425 (577)
T 2ymu_A 348 WGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH 425 (577)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCC
Confidence 34556778999999999999999995 67788889999999999998 7899999999999999995 57888899999
Q ss_pred CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE
Q psy9182 314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF 389 (486)
Q Consensus 314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~ 389 (486)
...|.+++|+++ .+++++.|+.|++||... + ....+.+|...|.+++| ++++|++++.|+.|++||. ++++
T Consensus 426 ~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~---~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~ 500 (577)
T 2ymu_A 426 SSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-Q---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL 500 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTS-C---EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCE
T ss_pred CCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-C---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCE
Confidence 999999999865 899999999999999643 3 23566789999999998 8899999999999999995 6888
Q ss_pred EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182 390 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463 (486)
Q Consensus 390 ~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd 463 (486)
+..+.+|...|++++|+ +++|++++.||.|++||. +++++..+.+|...|++++| |+++|+|++.||+|++||
T Consensus 501 ~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 501 LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999984 889999999999999996 58899999999999999999 899999999999999997
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=310.55 Aligned_cols=276 Identities=22% Similarity=0.407 Sum_probs=246.8
Q ss_pred ccccccccccCCccC----cceEEEeecCceeeecccccccc--eeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182 101 PMLQRDFISLLPNFD----EKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~----~~~l~tg~~dg~v~iWd~~~~~~--~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~ 174 (486)
..|...|.+++++++ +.+|+||+.||+|+|||+.+++. ...+.+|...|.+++|+
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~------------------- 89 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDIS------------------- 89 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-------------------
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEEC-------------------
Confidence 357889999999874 67999999999999999987653 45688999888888774
Q ss_pred eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254 (486)
Q Consensus 175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 254 (486)
+++..+++++.|+
T Consensus 90 -------------------------------------------------------------------~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 90 -------------------------------------------------------------------HTLPIAASSSLDA 102 (321)
T ss_dssp -------------------------------------------------------------------SSSSEEEEEETTS
T ss_pred -------------------------------------------------------------------CCCCEEEEEeCCC
Confidence 3456788899999
Q ss_pred eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEE
Q psy9182 255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTC 330 (486)
Q Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~ 330 (486)
.|++||+.+++.+..+..|...+.+++| ++++|++|+.||.|++||+++++....+..+...+.+++|+++ ++++|
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEE
Confidence 9999999999999999888888888887 7899999999999999999999999999999999999999865 89999
Q ss_pred eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--
Q psy9182 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-- 406 (486)
Q Consensus 331 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-- 406 (486)
+.||.|++||+++++.. ..+.+|...|.++.| ++++|++++.|+.|++||+++++....+.+|...|.+++|+
T Consensus 183 ~~dg~i~iwd~~~~~~~---~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLL---HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp ETTSCEEEEETTTTEEE---EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cCCCeEEEEECCCCcEE---EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCC
Confidence 99999999999887543 556789999999999 78899999999999999999999999999999999999984
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 407 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
+.+|++++.|++|++||+++++++..+.+|...|.+++| ++++|++++.||.|++||..
T Consensus 260 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 260 DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 789999999999999999999999999999999999999 78899999999999999964
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.7e-40 Score=310.54 Aligned_cols=274 Identities=23% Similarity=0.448 Sum_probs=238.5
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
..|...|.++.++|++++|++|+.||+|+|||+.+++.+..+..|...|.+++|+ +
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s---------------~--------- 107 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA---------------P--------- 107 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEEC---------------T---------
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEEC---------------C---------
Confidence 3577889999999999999999999999999999999999999999889888885 2
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
+++++++|+.|+.|++||
T Consensus 108 --------------------------------------------------------------~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 108 --------------------------------------------------------------SGNYVACGGLDNICSIYN 125 (340)
T ss_dssp --------------------------------------------------------------TSSEEEEEETTCEEEEEE
T ss_pred --------------------------------------------------------------CCCEEEEEeCCCeEEEEE
Confidence 344455555555555555
Q ss_pred CCCc----eeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCC
Q psy9182 261 RVSL----QCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKD 333 (486)
Q Consensus 261 ~~~~----~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~d 333 (486)
+.+. .....+.+|.+.|.++.| ++..+++++.||.|++||+++++.+..+.+|...|.+++|+++ .+++|+.|
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 5443 345567789999999998 5667999999999999999999999999999999999999865 89999999
Q ss_pred CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC--CcccEEEEEeC--C
Q psy9182 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG--HKRGIACLQYR--D 407 (486)
Q Consensus 334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~--~ 407 (486)
+.|++||++++... ..+.+|...|.++.| ++++|++++.|+.|++||+++++.+..+.. +...|.+++|+ +
T Consensus 206 ~~v~~wd~~~~~~~---~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 206 ASAKLWDVREGMCR---QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp SCEEEEETTTCSEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred CcEEEEECCCCeeE---EEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence 99999999987644 556789999999999 789999999999999999999988877753 33578888884 8
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463 (486)
Q Consensus 408 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd 463 (486)
++|++|+.||.|++||+.+++.+..+.+|...|.+++| ++.+|++|+.||+|++||
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999 888999999999999997
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-40 Score=304.53 Aligned_cols=276 Identities=22% Similarity=0.379 Sum_probs=242.5
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
.|...|.++.|+|++++|++|+.||+|++||+.+++.+..+.+|..+|.+++|.
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~-------------------------- 64 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFI-------------------------- 64 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--------------------------
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEe--------------------------
Confidence 467789999999999999999999999999999999999999999888888774
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR 261 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~ 261 (486)
+++++|++|+.|+.|++||+
T Consensus 65 ------------------------------------------------------------~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 65 ------------------------------------------------------------ARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp ------------------------------------------------------------GGGTEEEEEETTSEEEEEET
T ss_pred ------------------------------------------------------------CCCCEEEEECCCCEEEEEEC
Confidence 35677899999999999999
Q ss_pred CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcC---CeEEEEeCCCc
Q psy9182 262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRS 335 (486)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~ 335 (486)
.+++.+..+.+|...|.++++ +++++++|+.||+|++||++++ .....+.+|...|.+++|+| ..+++|+.|+.
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 999999999999999999998 6789999999999999999887 45667889999999999986 38999999999
Q ss_pred EEEEECCCCCceeeEEeeecCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCE
Q psy9182 336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRL 409 (486)
Q Consensus 336 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~ 409 (486)
|++||++...... ....++...+..+.+ ++.++++++.|+.|++||+++++++..+.+|...|.++.++ +.+
T Consensus 165 v~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 165 VKVWSLGQSTPNF--TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI 242 (304)
T ss_dssp EEEEETTCSSCSE--EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred EEEEECCCCCccc--eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCE
Confidence 9999998766443 333456677877777 56799999999999999999999999999999999999885 789
Q ss_pred EEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCC--EEEEEeCCCcEEEEeCCC
Q psy9182 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK--RIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 410 l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~--~l~s~~~dg~v~iwdl~~ 466 (486)
|++|+.||+|++||+++++++..+..|...+.+++| ++. ++++|+.|| +.+|++..
T Consensus 243 l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 243 IISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 999999999999999999999999999999999998 443 477776554 88888864
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.2e-40 Score=334.28 Aligned_cols=322 Identities=19% Similarity=0.257 Sum_probs=271.3
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
..+....++.++|||++||+++ ++.|++||+.+++....+.+|...|.+++|+ +++.+|++++.
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~s---------------pdg~~lasg~~ 79 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTS---------------PSGYYCASGDV 79 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEEC---------------TTSSEEEEEET
T ss_pred cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEEC---------------CCCcEEEEEeC
Confidence 3456678889999999999987 5699999999999999999999999999998 68899999999
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecC----CeEE
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD----NTIK 257 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----g~i~ 257 (486)
|++|++||+.+.... ....+.. .......+++++++++|++++.+ +.|+
T Consensus 80 d~~v~lWd~~~~~~~--------------------------~~~~~~~-~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~ 132 (611)
T 1nr0_A 80 HGNVRIWDTTQTTHI--------------------------LKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVF 132 (611)
T ss_dssp TSEEEEEESSSTTCC--------------------------EEEEEEC-SSSCEEEEEECTTSCEEEEEECCSSCSEEEE
T ss_pred CCCEEEeECCCCcce--------------------------eeEeecc-cCCceEEEEECCCCCEEEEEECCCCceeEEE
Confidence 999999997432210 1111221 12334456677789999988865 4677
Q ss_pred EEECCCceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182 258 VWDRVSLQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK 332 (486)
Q Consensus 258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~ 332 (486)
+|| .++....+.+|...|.+++| ++. .|++|+.|++|++||..+++....+.+|...|.+++|+|+ ++++++.
T Consensus 133 ~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 133 LFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp ETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred Eee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence 777 56667788999999999999 444 6999999999999999999999999999999999999875 8999999
Q ss_pred CCcEEEEECCCCCceeeEEe----eecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCC---cccEEEE
Q psy9182 333 DRSIAVWDMVSPNEITLRRV----LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACL 403 (486)
Q Consensus 333 dg~i~i~d~~~~~~~~~~~~----~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~v~~~ 403 (486)
|+.|++||+.+++....... ..+|...|.++.| ++++|++++.|++|++||+++++.+..+..+ ......+
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 99999999988775432110 1179999999999 7899999999999999999999998888643 3456777
Q ss_pred EeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 404 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 404 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
.+++..+++++.|+.|++||..+++....+.+|...|++++| ++++|++++.||+|++||+.++.
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 889999999999999999999999999999999999999999 89999999999999999998764
No 8
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.9e-40 Score=330.60 Aligned_cols=320 Identities=17% Similarity=0.271 Sum_probs=269.9
Q ss_pred ccccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
..|...+.+++|+|+|++||+|+.||+|+|||+.+++ ...++.+|.+.|.+++|+ +++..|++
T Consensus 56 ~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs---------------~dg~~l~~ 120 (611)
T 1nr0_A 56 TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWD---------------SESKRIAA 120 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEEC---------------TTSCEEEE
T ss_pred cCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEEC---------------CCCCEEEE
Confidence 3567789999999999999999999999999997554 456788999999999998 57777777
Q ss_pred CCCC----CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCC-EEEEEe
Q psy9182 179 SSHD----DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDH-KIVSGL 251 (486)
Q Consensus 179 ~s~d----g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~-~l~~~~ 251 (486)
++.+ +.|++||... .... ..+|...+ ++++|++. .|++|+
T Consensus 121 ~~~~~~~~~~v~~wd~~~--~~~~-------------------------------l~gh~~~v~~v~f~p~~~~~l~s~s 167 (611)
T 1nr0_A 121 VGEGRERFGHVFLFDTGT--SNGN-------------------------------LTGQARAMNSVDFKPSRPFRIISGS 167 (611)
T ss_dssp EECCSSCSEEEEETTTCC--BCBC-------------------------------CCCCSSCEEEEEECSSSSCEEEEEE
T ss_pred EECCCCceeEEEEeeCCC--Ccce-------------------------------ecCCCCCceEEEECCCCCeEEEEEe
Confidence 7654 4788888422 1100 11344444 44556665 699999
Q ss_pred cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec-------ccCccEEEEEE
Q psy9182 252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-------HHCEAVLHLRF 322 (486)
Q Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------~~~~~i~~~~~ 322 (486)
.|++|++||..++++...+.+|...|.+++| ++++|++|+.||+|++||+.+++.+..+. .|...|.+++|
T Consensus 168 ~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 168 DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEE
Confidence 9999999999999999999999999999999 78999999999999999999999988884 68999999999
Q ss_pred cCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccE
Q psy9182 323 SNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400 (486)
Q Consensus 323 ~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v 400 (486)
+++ .+++++.|+.|++||+.+++..........+......+.++++.+++++.|+.+++||...++....+.+|...|
T Consensus 248 spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v 327 (611)
T 1nr0_A 248 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAI 327 (611)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCE
Confidence 865 899999999999999998765543332233455667778899999999999999999999999889999999999
Q ss_pred EEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 401 ACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 401 ~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
.+++++ +++|++++.|+.|++||+.+++....+ .+|...|.+++| .+..|++++.|+.+++|++....
T Consensus 328 ~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 328 TALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSG 399 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSS
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcc
Confidence 999984 899999999999999999999887766 679999999999 66789999999999999987653
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=305.62 Aligned_cols=229 Identities=17% Similarity=0.256 Sum_probs=190.1
Q ss_pred EEEeCCCEEEEEecCCeEEEEECCCceeeEE----EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q psy9182 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV----LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 312 (486)
+++++ +.+++|+.||.|++||+.+++.+.. ..+|...|.+++| ++++|++|+.||+|++||+++++++..+.+
T Consensus 89 ~~s~d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~ 167 (344)
T 4gqb_B 89 TWVGE-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA 167 (344)
T ss_dssp EEETT-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEeCC-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 33444 4678889999999999888765543 4489999999999 789999999999999999999999999999
Q ss_pred cCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCC
Q psy9182 313 HCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSS 386 (486)
Q Consensus 313 ~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~ 386 (486)
|...|.+++|+++ .+++++.|+.|++||+++++..... ....+...+.++.+ +++++++|+.|+.|++||+++
T Consensus 168 h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 168 HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC-C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred cCCceEEEEecCCCCCceeeeccccccccccccccceeeee-ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 9999999999753 7899999999999999988765322 12345567888887 467899999999999999999
Q ss_pred ceEEEEEcCCcccEEEEEeC--C-CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCC-EEEEEeCCCcEE
Q psy9182 387 CEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK-RIVSGAYDGKIK 460 (486)
Q Consensus 387 ~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~~dg~v~ 460 (486)
++++..+.+|...|.+++|+ + ++|++|+.|++|+|||+++++++ .+.+|.+.|++++| ++. .|+++|.||+|+
T Consensus 247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 99999999999999999995 4 68999999999999999988765 57899999999999 554 577999999999
Q ss_pred EEeCCCCCCC
Q psy9182 461 VWNLVAALDP 470 (486)
Q Consensus 461 iwdl~~~~~~ 470 (486)
+|++.+...|
T Consensus 326 ~w~v~~~~~~ 335 (344)
T 4gqb_B 326 HHVVPTEPLP 335 (344)
T ss_dssp EEECCC----
T ss_pred EEECCCCCCC
Confidence 9999876443
No 10
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.2e-40 Score=318.84 Aligned_cols=277 Identities=31% Similarity=0.639 Sum_probs=239.5
Q ss_pred ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD 182 (486)
Q Consensus 103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d 182 (486)
+...+.++.+ ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---------------------------- 181 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---------------------------- 181 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC----------------------------
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE----------------------------
Confidence 3345666655 6788888888888888888888888888777777766655
Q ss_pred CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262 (486)
Q Consensus 183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~ 262 (486)
+++++++|+.||.|++||+.
T Consensus 182 ------------------------------------------------------------~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 182 ------------------------------------------------------------DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp ------------------------------------------------------------CSSEEEEEETTSCEEEEESS
T ss_pred ------------------------------------------------------------CCCEEEEEcCCCeEEEEECC
Confidence 45578889999999999999
Q ss_pred CceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEE---EEecccCccEEEEEEcCCeEEEEeCCCcEEEE
Q psy9182 263 SLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMV---NTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVW 339 (486)
Q Consensus 263 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~ 339 (486)
+++.+..+.+|...|.++.++++.+++|+.||.|++||+++++.. ..+.+|...|.++.+.++.+++|+.||.|++|
T Consensus 202 ~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 202 TGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW 281 (435)
T ss_dssp SCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred CCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEE
Confidence 999999999999999999999999999999999999999887654 66788999999999999999999999999999
Q ss_pred ECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcE
Q psy9182 340 DMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 419 (486)
Q Consensus 340 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v 419 (486)
|+++++.. ..+.+|...+.++.++++++++|+.||.|++||+++++.+..+.+|...|.++.+++.+|++|+.||.|
T Consensus 282 d~~~~~~~---~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i 358 (435)
T 1p22_A 282 NTSTCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 358 (435)
T ss_dssp ETTTCCEE---EEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCE
T ss_pred ECCcCcEE---EEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcE
Confidence 99988654 556689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCe---------eeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy9182 420 RLWDIECGA---------CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRA 472 (486)
Q Consensus 420 ~iwd~~~~~---------~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~~~~~~ 472 (486)
++||+.+++ ++..+.+|...|.+++|++.+|++++.||.|++||+........
T Consensus 359 ~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 359 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp EEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC---------
T ss_pred EEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 999997765 88899999999999999999999999999999999988765443
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.9e-39 Score=303.64 Aligned_cols=280 Identities=23% Similarity=0.380 Sum_probs=240.3
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
..|...|.++.++|++++|+||+.||+|+|||..+++....+..|...|.+++|+ +++..+++++
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~s---------------p~g~~lasg~ 125 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYA---------------PSGCAIACGG 125 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEEC---------------TTSSEEEEES
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEEC---------------CCCCEEEEee
Confidence 4577899999999999999999999999999999999999999999899999887 4666677777
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
.|+.+++|++......
T Consensus 126 ~d~~i~v~~~~~~~~~---------------------------------------------------------------- 141 (354)
T 2pbi_B 126 LDNKCSVYPLTFDKNE---------------------------------------------------------------- 141 (354)
T ss_dssp TTSEEEEEECCCCTTC----------------------------------------------------------------
T ss_pred CCCCEEEEEEeccccc----------------------------------------------------------------
Confidence 7777777775221000
Q ss_pred CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC----CeEEEEeCCC
Q psy9182 261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN----GMMVTCSKDR 334 (486)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~----~~l~~~~~dg 334 (486)
........+.+|...|.++.| ++..|++++.||+|++||+++++.+..+.+|...|.++.+.+ +.+++|+.||
T Consensus 142 -~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg 220 (354)
T 2pbi_B 142 -NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 220 (354)
T ss_dssp -CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS
T ss_pred -cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC
Confidence 001223345568899999998 678999999999999999999999999999999999999864 4899999999
Q ss_pred cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc--ccEEEEEeC--CC
Q psy9182 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK--RGIACLQYR--DR 408 (486)
Q Consensus 335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~v~~~~~~--~~ 408 (486)
.|++||+++++.. ..+.+|...|.++.| ++.++++++.|++|++||+++++.+..+..+. ..+.++.++ +.
T Consensus 221 ~v~~wd~~~~~~~---~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 221 KAMVWDMRSGQCV---QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR 297 (354)
T ss_dssp CEEEEETTTCCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred eEEEEECCCCcEE---EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC
Confidence 9999999988654 556789999999999 78999999999999999999988877776443 467788774 89
Q ss_pred EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182 409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463 (486)
Q Consensus 409 ~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd 463 (486)
+|++|+.|+.|++||+.+++.+..+.+|...|++++| ++++|++|+.||+|++|+
T Consensus 298 ~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 298 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999999999 889999999999999996
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-39 Score=298.59 Aligned_cols=277 Identities=31% Similarity=0.587 Sum_probs=245.8
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
..|...|.++.++|++++|++|+.||.|++||..+++....+.+|...|.+++|+
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~------------------------- 74 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS------------------------- 74 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-------------------------
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEc-------------------------
Confidence 4577889999999999999999999999999999999999999999999888874
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
+++++|++|+.||.|++||
T Consensus 75 -------------------------------------------------------------~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 75 -------------------------------------------------------------SDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp -------------------------------------------------------------TTSSEEEEEETTSEEEEEE
T ss_pred -------------------------------------------------------------CCCCEEEEECCCCEEEEEE
Confidence 3566788888999999999
Q ss_pred CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcE
Q psy9182 261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSI 336 (486)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i 336 (486)
+.+++.+..+.+|...|.++.| +++++++|+.||.|++||+++++.+..+..|...|.++.|+++ .+++++.||.|
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 9999999999999999999998 6889999999999999999999999999999999999999864 89999999999
Q ss_pred EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE----EEEe-CCCE
Q psy9182 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA----CLQY-RDRL 409 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~----~~~~-~~~~ 409 (486)
++||+++++... .....+...+..+.+ +++++++++.|+.|++||+++++.+..+.+|..... .+.. ++.+
T Consensus 174 ~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 174 RIWDTASGQCLK--TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp EEEETTTCCEEE--EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred EEEECCCCceee--EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 999999876543 333456677888887 789999999999999999999999999998876432 2222 4789
Q ss_pred EEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEe--CCCcEEEEeCC
Q psy9182 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA--YDGKIKVWNLV 465 (486)
Q Consensus 410 l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~--~dg~v~iwdl~ 465 (486)
|++|+.||.|++||+++++.+..+.+|...|.+++| ++++|++++ .|++|++|+.+
T Consensus 252 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999999999999999999999999 788899987 69999999975
No 13
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-38 Score=320.43 Aligned_cols=324 Identities=32% Similarity=0.581 Sum_probs=267.7
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeec--ceeEecCCCCceecc-------
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYR------- 171 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~--~~~~~~~~d~~i~~~------- 171 (486)
..+...+.++.++|++++|++++.||.|++||. +++.+..+.+|...|.+++|++ +.+++++.|+.+++|
T Consensus 177 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~ 255 (577)
T 2ymu_A 177 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL 255 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred cCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEE
Confidence 345567788899999999999999999999996 5788999999999999999973 355666666655543
Q ss_pred -----------------CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCc
Q psy9182 172 -----------------DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234 (486)
Q Consensus 172 -----------------~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (486)
++..+++++.|+.|++||.. ......+. .+.
T Consensus 256 ~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-----------------------------~~~~~~~~---~h~ 303 (577)
T 2ymu_A 256 QTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-----------------------------GQLLQTLT---GHS 303 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------------------------SCEEEEEC---CCS
T ss_pred EEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-----------------------------CcEEEEEe---cCC
Confidence 23445556666666666532 11222222 333
Q ss_pred cce--EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182 235 KGV--YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL 310 (486)
Q Consensus 235 ~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 310 (486)
..+ ++++++++.+++++.||.|++||... ..+..+.+|...+.++++ +++++++++.||.|++||. +++.+..+
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~ 381 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL 381 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEe
Confidence 344 45667899999999999999999765 456778899999999988 7899999999999999995 57888899
Q ss_pred cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC
Q psy9182 311 IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS 386 (486)
Q Consensus 311 ~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~ 386 (486)
..|...|.+++|+++ .+++++.|+.|++||.. ++ ....+.+|...|.++.| ++++|++++.|+.|++||. +
T Consensus 382 ~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~---~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~ 456 (577)
T 2ymu_A 382 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ---LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-N 456 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-T
T ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CC---EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-C
Confidence 999999999999865 89999999999999964 33 33566789999999998 7899999999999999996 5
Q ss_pred ceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182 387 CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462 (486)
Q Consensus 387 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iw 462 (486)
++.+..+.+|...|.+++++ +++|++++.|+.|++||. +++++..+.+|...|++++| ++++|++++.||.|++|
T Consensus 457 ~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 457 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 78888999999999999984 899999999999999995 58899999999999999999 88999999999999999
Q ss_pred eCC
Q psy9182 463 NLV 465 (486)
Q Consensus 463 dl~ 465 (486)
|..
T Consensus 536 d~~ 538 (577)
T 2ymu_A 536 NRN 538 (577)
T ss_dssp CTT
T ss_pred eCC
Confidence 964
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.1e-40 Score=307.37 Aligned_cols=280 Identities=18% Similarity=0.295 Sum_probs=220.7
Q ss_pred ccccccccccCCccCcceEEEeec------Cceeeecccccccce----eeecCcccceeEEEeecceeEecCCCCceec
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASG------DRTIKVWNTSSCEFV----RTLNGHKRGIACLQYRDRLVVSGSSDNTIRY 170 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~------dg~v~iWd~~~~~~~----~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~ 170 (486)
..|...|.++.|+|||++||+|+. ||.|++|+..++... ....+|...|.+++|++
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-------------- 104 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVS-------------- 104 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEET--------------
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcC--------------
Confidence 357788999999999999999997 677888887766543 33356777788888752
Q ss_pred cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG 250 (486)
Q Consensus 171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 250 (486)
++ .++++
T Consensus 105 -d~------------------------------------------------------------------------~~l~~ 111 (357)
T 4g56_B 105 -EK------------------------------------------------------------------------GILVA 111 (357)
T ss_dssp -TT------------------------------------------------------------------------EEEEE
T ss_pred -CC------------------------------------------------------------------------CEEEE
Confidence 22 22334
Q ss_pred ecCCeEEEEECCCceee----EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC
Q psy9182 251 LRDNTIKVWDRVSLQCI----KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN 324 (486)
Q Consensus 251 ~~dg~i~i~d~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~ 324 (486)
+.||.|++||+.+++.. ....+|...|.+++| ++++|++|+.||.|++||+++++.+..+..|...|.+++|++
T Consensus 112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 44445555554444322 233478999999998 789999999999999999999999999999999999999975
Q ss_pred C---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc
Q psy9182 325 G---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398 (486)
Q Consensus 325 ~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 398 (486)
+ .+++++.||.|++||+++++.... .....+...+.++.| ++.++++|+.|+.|++||+++++.+..+.+|..
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~ 270 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATR-IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ 270 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCB-CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS
T ss_pred CCCceeeeeccCCceEEEECCCCceeee-eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccce
Confidence 3 789999999999999998765432 223456778899998 357899999999999999999999999999999
Q ss_pred cEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 399 GIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 399 ~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
.|.+++|+ +++|++|+.|++|+|||+++++++..+ +|.+.|++++| ++.+|++++.||+|++|++.+..+
T Consensus 271 ~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 271 NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 99999984 368999999999999999999887665 79999999999 578999999999999999986543
No 15
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-39 Score=312.07 Aligned_cols=316 Identities=13% Similarity=0.223 Sum_probs=265.0
Q ss_pred ccccccccccCCccCcc-eEEEeecCceeeeccc----cccc------ceeeecC----------cccceeEEEeeccee
Q psy9182 101 PMLQRDFISLLPNFDEK-YIVSASGDRTIKVWNT----SSCE------FVRTLNG----------HKRGIACLQYRDRLV 159 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~-~l~tg~~dg~v~iWd~----~~~~------~~~~l~~----------h~~~V~~~~~~~~~~ 159 (486)
..|...|.++.++|+++ +||+|+.||.|++||+ .+++ ....+.. |...|.+++|+
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---- 117 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS---- 117 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC----
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc----
Confidence 34557899999999999 9999999999999999 8888 4555554 78899999997
Q ss_pred EecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE
Q psy9182 160 VSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC 239 (486)
Q Consensus 160 ~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 239 (486)
+++.+|++++.||.|++||... . ....+.. .......++
T Consensus 118 -----------~~~~~l~~~~~dg~i~i~~~~~-~----------------------------~~~~~~~-~~~~v~~~~ 156 (425)
T 1r5m_A 118 -----------HDGNSIVTGVENGELRLWNKTG-A----------------------------LLNVLNF-HRAPIVSVK 156 (425)
T ss_dssp -----------TTSSEEEEEETTSCEEEEETTS-C----------------------------EEEEECC-CCSCEEEEE
T ss_pred -----------CCCCEEEEEeCCCeEEEEeCCC-C----------------------------eeeeccC-CCccEEEEE
Confidence 5778899999999999999321 1 1111111 122333445
Q ss_pred EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCccc---------------EEEEEe-cCCEEEEEeCCCcEEEEECCC
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS---------------VLCLQY-DERVIISGSSDSTVRVWDVNT 303 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------------v~~~~~-~~~~l~~~~~dg~i~vwd~~~ 303 (486)
+++++++|++++.||.|++||+.+++.+..+..+... +.++.+ .+..+++++.+|.|++||+++
T Consensus 157 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~ 236 (425)
T 1r5m_A 157 WNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE 236 (425)
T ss_dssp ECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTC
T ss_pred ECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCC
Confidence 5668999999999999999999999999999887776 778887 567899999999999999999
Q ss_pred CcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcE
Q psy9182 304 GEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTI 379 (486)
Q Consensus 304 ~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i 379 (486)
++.+..+..|...|.+++|+++ .+++++.|+.|++||+++++.. ..+..|...+.++.+ ++ ++++++.|+.|
T Consensus 237 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i 312 (425)
T 1r5m_A 237 KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ---NCFYGHSQSIVSASWVGDD-KVISCSMDGSV 312 (425)
T ss_dssp SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCS---EEECCCSSCEEEEEEETTT-EEEEEETTSEE
T ss_pred CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccc---eEecCCCccEEEEEECCCC-EEEEEeCCCcE
Confidence 9999999999999999999864 8999999999999999887654 445678899999999 45 99999999999
Q ss_pred EEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCe--------------------eeEEecCcc
Q psy9182 380 KVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA--------------------CLRVLEGHE 437 (486)
Q Consensus 380 ~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~--------------------~~~~~~~h~ 437 (486)
++||+++++.+..+..|...+.++.++ +++|++++.||.|++||+++++ .+..+.+|.
T Consensus 313 ~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (425)
T 1r5m_A 313 RLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQ 392 (425)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTT
T ss_pred EEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcc
Confidence 999999999999999999999999985 8899999999999999999888 889999997
Q ss_pred c--CeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 438 E--LVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 438 ~--~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
. .|++++| ++++|++++.||.|++||++
T Consensus 393 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 393 DNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 6 9999999 78899999999999999986
No 16
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.6e-40 Score=311.39 Aligned_cols=298 Identities=25% Similarity=0.463 Sum_probs=248.6
Q ss_pred CceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCC
Q psy9182 125 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGG 204 (486)
Q Consensus 125 dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~ 204 (486)
+..+..|+..+..+.+++.+|.+.|.+++|+ +++.+|++++.|++|++||+.+....
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~s---------------p~~~~l~s~s~D~~v~iWd~~~~~~~-------- 101 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHSGKVYSLDWT---------------PEKNWIVSASQDGRLIVWNALTSQKT-------- 101 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCSSCEEEEEEC---------------TTSSCEEEEETTSEEEEEETTTTEEE--------
T ss_pred cccccccccceeEEeecccccccEEEEEEEc---------------CCCCEEEEEeCCCeEEEEECCCCccc--------
Confidence 3456678888888899999999999999998 68889999999999999997543321
Q ss_pred CCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce-------eeEEEcCCcccE
Q psy9182 205 GPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-------CIKVLTGHTGSV 277 (486)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~v 277 (486)
..+..+ ......++++++++++++|+.|+.+++||+.+.. ....+.+|.+.|
T Consensus 102 --------------------~~~~~h-~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v 160 (380)
T 3iz6_a 102 --------------------HAIKLH-CPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYA 160 (380)
T ss_dssp --------------------EEEECC-CTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCC
T ss_pred --------------------eEEecC-CCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcce
Confidence 112211 2233445788899999999999999999986532 345677899999
Q ss_pred EEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEe-----cccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCc
Q psy9182 278 LCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTL-----IHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNE 346 (486)
Q Consensus 278 ~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~-----~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~ 346 (486)
.++.| ++..|++|+.|++|++||+++++.+..+ .+|...|.++.+++ +.+++|+.|+.|++||++....
T Consensus 161 ~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 161 SSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR 240 (380)
T ss_dssp CCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC
T ss_pred EEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc
Confidence 98888 3567999999999999999999998877 56888999999953 5999999999999999985432
Q ss_pred eeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-------cEEEEEe--CCCEEEEEeC
Q psy9182 347 ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-------GIACLQY--RDRLVVSGSS 415 (486)
Q Consensus 347 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~--~~~~l~~~~~ 415 (486)
....+.+|...|.++.| ++++|++++.|++|++||+++++.+..+..+.. .+.+++| ++++|++|+.
T Consensus 241 --~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 318 (380)
T 3iz6_a 241 --AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS 318 (380)
T ss_dssp --CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT
T ss_pred --ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC
Confidence 22566789999999999 789999999999999999999999888865432 3667777 5899999999
Q ss_pred CCcEEEEECCCCeeeEEe----cCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 416 DNTIRLWDIECGACLRVL----EGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 416 dg~v~iwd~~~~~~~~~~----~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
||.|++||+.+++.+..+ .+|...|++++| ++.+|++|+.||+|++|++....
T Consensus 319 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 319 NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999988887 689999999999 89999999999999999998653
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5e-38 Score=305.33 Aligned_cols=287 Identities=33% Similarity=0.673 Sum_probs=256.3
Q ss_pred cccccccceeeecCcccce-eEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCC
Q psy9182 131 WNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPS 209 (486)
Q Consensus 131 Wd~~~~~~~~~l~~h~~~V-~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~ 209 (486)
|.....+....+.+|.+.| .++.+ ++.++++++.||+|++||+.++...
T Consensus 103 w~~~~~~~~~~l~~h~~~v~~~~~~-----------------~g~~l~sg~~dg~i~vwd~~~~~~~------------- 152 (445)
T 2ovr_B 103 WRRGELKSPKVLKGHDDHVITCLQF-----------------CGNRIVSGSDDNTLKVWSAVTGKCL------------- 152 (445)
T ss_dssp HHHSCCCCCEEEECSTTSCEEEEEE-----------------ETTEEEEEETTSCEEEEETTTCCEE-------------
T ss_pred ccCCCcceeEEecccCCCcEEEEEE-----------------cCCEEEEEECCCcEEEEECCCCcEE-------------
Confidence 4444445677889998875 66665 4556888888999999998553321
Q ss_pred CcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEE
Q psy9182 210 GPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289 (486)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 289 (486)
.....+...+.++.++++.+++|+.||.|++||+.+++.+..+.+|...|.++.++++.+++
T Consensus 153 ------------------~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s 214 (445)
T 2ovr_B 153 ------------------RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVS 214 (445)
T ss_dssp ------------------EECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEE
T ss_pred ------------------EEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEE
Confidence 11235677888899999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCE
Q psy9182 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY 369 (486)
Q Consensus 290 ~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 369 (486)
|+.||.|++||+.+++.+..+..|...+.++.++++.+++|+.||.|++||+++++.. ..+.+|...+.++.+++.+
T Consensus 215 ~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~ 291 (445)
T 2ovr_B 215 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL---HTLQGHTNRVYSLQFDGIH 291 (445)
T ss_dssp EETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEE---EEECCCSSCEEEEEECSSE
T ss_pred EeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEe---EEecCCCCceEEEEECCCE
Confidence 9999999999999999999999999999999998889999999999999999887544 5566899999999999999
Q ss_pred EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeEEEEec
Q psy9182 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRCIRFD 446 (486)
Q Consensus 370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~~~ 446 (486)
+++++.|+.|++||+++++.+..+.+|...+.++.++++++++|+.||.|++||+++++.+..+.. |...|.+++|+
T Consensus 292 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 371 (445)
T 2ovr_B 292 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 371 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999986 88899999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCC
Q psy9182 447 AKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 447 ~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
+++|++|+.||.|++||+.++.
T Consensus 372 ~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 372 KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp SSEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999998764
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7e-38 Score=290.07 Aligned_cols=275 Identities=23% Similarity=0.422 Sum_probs=237.0
Q ss_pred ccccccccccCCccCc-ceEEEeecCceeeeccccc-----ccceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182 101 PMLQRDFISLLPNFDE-KYIVSASGDRTIKVWNTSS-----CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~-~~l~tg~~dg~v~iWd~~~-----~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~ 174 (486)
..|...|.+++++|++ ++|++|+.||+|++||+.+ +..+..+.+|...|.+++|+
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s------------------- 74 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLT------------------- 74 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEEC-------------------
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEEC-------------------
Confidence 4678889999999865 8999999999999999864 34567788888888877763
Q ss_pred eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254 (486)
Q Consensus 175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 254 (486)
++++++++|+.|+
T Consensus 75 -------------------------------------------------------------------~dg~~l~s~s~D~ 87 (319)
T 3frx_A 75 -------------------------------------------------------------------ADGAYALSASWDK 87 (319)
T ss_dssp -------------------------------------------------------------------TTSSEEEEEETTS
T ss_pred -------------------------------------------------------------------CCCCEEEEEeCCC
Confidence 4667899999999
Q ss_pred eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC-------
Q psy9182 255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG------- 325 (486)
Q Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~------- 325 (486)
+|++||+.+++.+..+.+|...|.++++ ++.++++|+.||.|++||++ ++.+..+.+|...+.++.+.+.
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------C
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 9999999999999999999999999999 67899999999999999996 5677888899999999999763
Q ss_pred -eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182 326 -MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402 (486)
Q Consensus 326 -~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 402 (486)
.+++++.|+.|++||+++.+. ...+.+|...|.++.+ ++++|++++.|+.|++||+.+++.+..+..+ ..+.+
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~---~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~ 242 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQI---EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFS 242 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEE---EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEE
T ss_pred cEEEEEeCCCEEEEEECCcchh---heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEE
Confidence 799999999999999987653 3556789999999999 7899999999999999999999999988864 57888
Q ss_pred EEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC--------cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 403 LQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG--------HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 403 ~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--------h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
++|+ +.++++++. +.+++|++..+..+..+.. |...+.+++| ||++|++|+.||.|++||+.++
T Consensus 243 ~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 243 LAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 8884 778887775 4599999998877776643 4567899999 8999999999999999998754
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-38 Score=299.53 Aligned_cols=295 Identities=26% Similarity=0.422 Sum_probs=238.3
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
.|...|.++.|+|||++||+|+ ++.++||++.+++.+..+..|......... +....
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~---------------------~~~~~- 118 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPEN---------------------LNTSS- 118 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------------------------------
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcccccccccc---------------------ccccc-
Confidence 3677899999999999999986 689999999999988887766432110000 00000
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR 261 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~ 261 (486)
..........+++++++++|++|+.||.|++||+
T Consensus 119 ----------------------------------------------~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~ 152 (393)
T 1erj_A 119 ----------------------------------------------SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDI 152 (393)
T ss_dssp ------------------------------------------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ----------------------------------------------cCCCceeEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 0000111234567789999999999999999999
Q ss_pred CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC---CeEEEEeCCCcE
Q psy9182 262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSI 336 (486)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i 336 (486)
.+++.+..+.+|...|.+++| ++++|++++.|++|++||+++++....+.. ...+.++++++ .++++|+.|+.|
T Consensus 153 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~s~d~~v 231 (393)
T 1erj_A 153 ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-EDGVTTVAVSPGDGKYIAAGSLDRAV 231 (393)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSTTCCEEEEEETTSCE
T ss_pred CCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc-CCCcEEEEEECCCCCEEEEEcCCCcE
Confidence 999999999999999999999 788999999999999999999988877754 56788999875 489999999999
Q ss_pred EEEECCCCCceeeEE----eeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc------------eEEEEEcCCcc
Q psy9182 337 AVWDMVSPNEITLRR----VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC------------EFVRTLNGHKR 398 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~----~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~------------~~~~~~~~~~~ 398 (486)
++||++++....... ...+|...|.++.| ++++|++++.|+.|++||+++. .+...+.+|..
T Consensus 232 ~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~ 311 (393)
T 1erj_A 232 RVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD 311 (393)
T ss_dssp EEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSS
T ss_pred EEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccC
Confidence 999999876543221 12578899999999 7899999999999999998753 34567789999
Q ss_pred cEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEec--------CCEEEEEeCCCcEEEEeCCC
Q psy9182 399 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--------AKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 399 ~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~--------~~~l~s~~~dg~v~iwdl~~ 466 (486)
.|.++.++ +.+|++|+.||.|++||+++++++..+.+|...|.+++|. +++|++|+.||+|++|++..
T Consensus 312 ~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 312 FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 99999984 7899999999999999999999999999999999999982 56899999999999999864
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=294.79 Aligned_cols=284 Identities=21% Similarity=0.410 Sum_probs=226.1
Q ss_pred cccc-cccccCCccCcceEEEeecCceeeeccccccccee---eecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182 102 MLQR-DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVR---TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177 (486)
Q Consensus 102 ~~~~-~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~---~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~ 177 (486)
.|.. .+.+++++|+|++||+|+.||+|+|||+.+++... ...+|...|.+++|+
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~s---------------------- 70 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWS---------------------- 70 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEEC----------------------
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEEC----------------------
Confidence 3444 78899999999999999999999999998876432 236788888888885
Q ss_pred cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK 257 (486)
Q Consensus 178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 257 (486)
|++++|++|+.|+.++
T Consensus 71 ----------------------------------------------------------------p~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 71 ----------------------------------------------------------------PCGNYLASASFDATTC 86 (345)
T ss_dssp ----------------------------------------------------------------TTSSEEEEEETTSCEE
T ss_pred ----------------------------------------------------------------CCCCEEEEEECCCcEE
Confidence 3445566666666666
Q ss_pred EEECCCc--eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc---EEEEecccCccEEEEEEcCC--eEE
Q psy9182 258 VWDRVSL--QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE---MVNTLIHHCEAVLHLRFSNG--MMV 328 (486)
Q Consensus 258 i~d~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~i~~~~~~~~--~l~ 328 (486)
+||...+ +++..+.+|...|.+++| ++++|++|+.|+.|++||++++. .+..+..|...|.+++|+++ +++
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence 6665544 456778899999999999 78999999999999999998763 45677889999999999864 899
Q ss_pred EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC---------------ceEEE
Q psy9182 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS---------------CEFVR 391 (486)
Q Consensus 329 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~---------------~~~~~ 391 (486)
+++.|+.|++||.+.++.. ....+.+|...|.+++| ++++|++++.|++|++||... .+++.
T Consensus 167 s~s~d~~i~~w~~~~~~~~-~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWV-CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp EEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEE-EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE
Confidence 9999999999999876432 33567789999999999 789999999999999999632 23445
Q ss_pred EEcC-CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCe---------eeEEecCcccCeEEEEe--cC-CEEEEEeCC
Q psy9182 392 TLNG-HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRF--DA-KRIVSGAYD 456 (486)
Q Consensus 392 ~~~~-~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~---------~~~~~~~h~~~v~~~~~--~~-~~l~s~~~d 456 (486)
.+.+ |...|.+++|+ +..|++++.|+.|++|+...+. ......+|...|++++| ++ .+|++|+.|
T Consensus 246 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~D 325 (345)
T 3fm0_A 246 TLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDD 325 (345)
T ss_dssp EECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETT
T ss_pred EecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCC
Confidence 5555 88899999995 7899999999999999987542 12234689999999999 44 589999999
Q ss_pred CcEEEEeCCCCCCCCC
Q psy9182 457 GKIKVWNLVAALDPRA 472 (486)
Q Consensus 457 g~v~iwdl~~~~~~~~ 472 (486)
|+|++|++....++..
T Consensus 326 g~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 326 GEVAFWKYQRPEGLHH 341 (345)
T ss_dssp SCEEEEEECC------
T ss_pred CcEEEEEecCCCCccc
Confidence 9999999998765543
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.6e-38 Score=306.79 Aligned_cols=310 Identities=25% Similarity=0.479 Sum_probs=255.4
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
.|...+++ +..+++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|++ ++ .+++++.
T Consensus 119 ~h~~~v~~-~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~---------------~~-~l~s~s~ 181 (464)
T 3v7d_B 119 GHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH---------------GG-ILVSGST 181 (464)
T ss_dssp CCSSSCEE-EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS---------------TT-EEEEEET
T ss_pred CCCCCcEE-EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcC---------------CC-EEEEEeC
Confidence 34444433 2334678999999999999999999999999999999999999962 33 7899999
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE--EE--eCCCEEEEEecCCeEE
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC--LQ--YDDHKIVSGLRDNTIK 257 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~--~~~~~l~~~~~dg~i~ 257 (486)
||+|++||+.++... ..+ ..+...+.+ +. +++.++++|+.||.|+
T Consensus 182 dg~i~vwd~~~~~~~----------------------------~~~---~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCT----------------------------HVF---EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp TSCEEEEETTTTEEE----------------------------EEE---CCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred CCCEEEEECCCCcEE----------------------------EEE---CCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 999999998653321 111 134444444 44 3568999999999999
Q ss_pred EEECCCcee-----------------------eEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182 258 VWDRVSLQC-----------------------IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHC 314 (486)
Q Consensus 258 i~d~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 314 (486)
+||+.++.. +..+.+|...+.++..+++++++|+.||.|++||+++++.+..+..|.
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 999987652 556788999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182 315 EAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392 (486)
Q Consensus 315 ~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 392 (486)
..|.++.|+++ .+++|+.||.|++||+++++.. ..+.+|...|.++.++++++++++.||.|++||+.+++....
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~---~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELM---YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE---EEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE---EEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeee
Confidence 99999999864 9999999999999999887644 566789999999999999999999999999999999877666
Q ss_pred Ec-CCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEecCCEEEEE-eCCCcEEEEe
Q psy9182 393 LN-GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFDAKRIVSG-AYDGKIKVWN 463 (486)
Q Consensus 393 ~~-~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~l~s~-~~dg~v~iwd 463 (486)
.. .+...+.++..+++++++|+ ||.|++||+++++.+.. +..|...|.+++|+++.++++ +.||.+.+|-
T Consensus 388 ~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 388 YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred ecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEE
Confidence 54 33345667777899999998 89999999999999886 678899999999977776555 5566554443
No 22
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.4e-38 Score=318.54 Aligned_cols=363 Identities=17% Similarity=0.234 Sum_probs=238.5
Q ss_pred cccccc-ccccCCcc--CcceEEEeecCceeeecccccc--------cceeeecCcccceeEEEee--cceeEecCCC--
Q psy9182 101 PMLQRD-FISLLPNF--DEKYIVSASGDRTIKVWNTSSC--------EFVRTLNGHKRGIACLQYR--DRLVVSGSSD-- 165 (486)
Q Consensus 101 ~~~~~~-~~~~~~s~--~~~~l~tg~~dg~v~iWd~~~~--------~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d-- 165 (486)
..|... |.++.++| ++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+ ++.+++++.+
T Consensus 60 ~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 139 (615)
T 1pgu_A 60 TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 139 (615)
T ss_dssp CTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS
T ss_pred ecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC
Confidence 346677 99999999 9999999999999999999855 6788889999999999997 4577777766
Q ss_pred --CceeccC-----------------------cc-eeecCCCCCcceeeecccccccccCCCCCC---CC-----CCC-C
Q psy9182 166 --NTIRYRD-----------------------EF-QIVSSSHDDTILIWDFLNYSETPIQGGGGG---GP-----PPS-G 210 (486)
Q Consensus 166 --~~i~~~~-----------------------~~-~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~---~~-----~~~-~ 210 (486)
+.+.+++ +. .+++++.|+.|++||+.+............ .. .+. +
T Consensus 140 ~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (615)
T 1pgu_A 140 NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSG 219 (615)
T ss_dssp CSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTC
T ss_pred CccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCC
Confidence 3444433 33 799999999999999866543322211110 00 000 0
Q ss_pred cccccccccCceeE------EEEecc-C---CCccceEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCc----c
Q psy9182 211 PSIENNWRMGKFLL------QRINCR-S---ENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT----G 275 (486)
Q Consensus 211 ~~~~~~~~~~~~~~------~~~~~~-~---~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~ 275 (486)
..+...-..+...+ ..+... . .+...+.++.+ ++.++++++.||.|++||+.+++.+..+..+. .
T Consensus 220 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 299 (615)
T 1pgu_A 220 EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 299 (615)
T ss_dssp CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGG
T ss_pred CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccC
Confidence 00000000000000 011122 1 34444445555 44455555555555555555555555555441 3
Q ss_pred cEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEE--------------------------------
Q psy9182 276 SVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-------------------------------- 322 (486)
Q Consensus 276 ~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~-------------------------------- 322 (486)
.+.++.+ +++++++++.||.|++||+.+++.+..+..|...|.+++|
T Consensus 300 ~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~ 379 (615)
T 1pgu_A 300 QQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLD 379 (615)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEE
T ss_pred ceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEE
Confidence 3334433 4455555555555555555444444444444444443333
Q ss_pred -c-CCeEEEEeCCCcEEEE-------------------------------------------------------------
Q psy9182 323 -S-NGMMVTCSKDRSIAVW------------------------------------------------------------- 339 (486)
Q Consensus 323 -~-~~~l~~~~~dg~i~i~------------------------------------------------------------- 339 (486)
. ++.+++++.|+.|++|
T Consensus 380 ~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 459 (615)
T 1pgu_A 380 NSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYV 459 (615)
T ss_dssp CCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEE
T ss_pred ECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEE
Confidence 1 1233333333333333
Q ss_pred -------------ECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC-CcccEEEE
Q psy9182 340 -------------DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACL 403 (486)
Q Consensus 340 -------------d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~ 403 (486)
|+.+++... ....+|...|.++.| ++++|++++.|+.|++||+.+++.+..+.+ |...|+++
T Consensus 460 ~~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~ 537 (615)
T 1pgu_A 460 AVGLEEGNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAI 537 (615)
T ss_dssp EEEETTTSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEE
T ss_pred EEeecCCCeEEEEECCCccccc--cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEE
Confidence 333221110 344568889999999 889999999999999999999999999988 99999999
Q ss_pred Ee------------CCCEEEEEeCCCcEEEEECCCC-eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 404 QY------------RDRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 404 ~~------------~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
.| ++++|++++.||.|++||+.++ +++..+.+|...|++++| ++. |++++.||.|++|++..
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 98 6789999999999999999998 888999999999999999 788 99999999999999874
No 23
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.1e-37 Score=301.89 Aligned_cols=273 Identities=89% Similarity=1.448 Sum_probs=252.0
Q ss_pred cccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeC
Q psy9182 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSS 292 (486)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 292 (486)
...+|..+......+..+..+...+.|++++++++++|+.||.|++||+.+++....+.+|...|.+++++++++++|+.
T Consensus 112 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~ 191 (435)
T 1p22_A 112 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSS 191 (435)
T ss_dssp HHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEET
T ss_pred HHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcC
Confidence 34567777766677777778888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEE
Q psy9182 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVS 372 (486)
Q Consensus 293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 372 (486)
||.|++||+.+++.+..+..|...|.++.++++.+++|+.||.|++||+.++..........+|...|.++.++++++++
T Consensus 192 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s 271 (435)
T 1p22_A 192 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVS 271 (435)
T ss_dssp TSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEE
T ss_pred CCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999887766667788999999999999999999
Q ss_pred EeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEE
Q psy9182 373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452 (486)
Q Consensus 373 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s 452 (486)
++.||.|++||+++++.+..+.+|...+.++.++++++++|+.||.|++||+++++++..+.+|...|.+++|++++|++
T Consensus 272 ~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s 351 (435)
T 1p22_A 272 ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 351 (435)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEE
T ss_pred EeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEeCCCCCCCCCCccccceeeeeec
Q psy9182 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVS 485 (486)
Q Consensus 453 ~~~dg~v~iwdl~~~~~~~~~~~~~~~~~~~~~ 485 (486)
|+.||.|++||+..+..+..+....+..++.+|
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h 384 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 384 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCC
Confidence 999999999999887766666555566666544
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.4e-37 Score=285.92 Aligned_cols=317 Identities=17% Similarity=0.266 Sum_probs=263.6
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
.+...+.+++++|||++++++..++.+.+|+...........+|...|.+++|+ +++.++++++
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---------------~~~~~l~~~~- 70 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTIS---------------NPTRHVYTGG- 70 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEEC---------------SSSSEEEEEC-
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEe---------------cCCcEEEEcC-
Confidence 455678899999999999999988888888876655555556899999999997 5777888888
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEec-cCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINC-RSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
||.|++||+.+....... ..+.. ........++++++++++++++.||.|++||
T Consensus 71 dg~i~iw~~~~~~~~~~~-------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPV-------------------------SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp BSEEEEEETTSTTCCSCS-------------------------EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred CCeEEEEECCCCCceeee-------------------------ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 999999998654321110 11111 1123334455667899999999999999999
Q ss_pred CCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCC
Q psy9182 261 RVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDR 334 (486)
Q Consensus 261 ~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg 334 (486)
+.+++ ....+..|...|.++.+ +++++++++.||.|++||+++++.+..+..|...+.++.|+++ .+++++.||
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 205 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 205 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCC
Confidence 99877 66778889999999998 7789999999999999999999999999999999999999864 899999999
Q ss_pred cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEE
Q psy9182 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV 410 (486)
Q Consensus 335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l 410 (486)
.|++||+++++.... ..+...+.++.+ +++++++++.++.|++||+++++. ..+..|...+.++.++ +++|
T Consensus 206 ~i~~~d~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l 280 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQ----HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWF 280 (337)
T ss_dssp EEEEEETTTTEEEEE----EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCceEee----ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEE
Confidence 999999998765432 236677888888 789999999999999999998775 4678899999999995 8899
Q ss_pred EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
++++.||.|++||+.+++.+... .|...|.+++| ++++|++++.||.|++||+.
T Consensus 281 ~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 281 VSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 99999999999999999887554 47889999999 88999999999999999973
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-38 Score=303.04 Aligned_cols=289 Identities=23% Similarity=0.343 Sum_probs=236.5
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
..|...|.++.++|++++|++|+.||+|+|||+.+++.+..+.+|...|.+++|+ +++.+|++++
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s---------------~~g~~las~~ 127 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFA---------------PNGQSVACGG 127 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEEC---------------TTSSEEEECC
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEEC---------------CCCCEEEEee
Confidence 4578899999999999999999999999999999999999999999999999997 6888999999
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEEeC-CCEEEEEecCCeEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQYD-DHKIVSGLRDNTIK 257 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~-~~~l~~~~~dg~i~ 257 (486)
.|+.+++||+............ . ....+|...+. .+.++ +..|++|+.|++|+
T Consensus 128 ~d~~v~iw~~~~~~~~~~~~~~---------------------~---~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~ 183 (380)
T 3iz6_a 128 LDSACSIFNLSSQADRDGNMPV---------------------S---RVLTGHKGYASSCQYVPDQETRLITGSGDQTCV 183 (380)
T ss_dssp SSSCCEEEECCCCSSCCCSSTT---------------------C---CBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEE
T ss_pred CCCcEEEEECCCCccccCCccc---------------------e---eeccCCCcceEEEEEecCCCCEEEEECCCCcEE
Confidence 9999999998653211000000 0 00112322232 23343 56799999999999
Q ss_pred EEECCCceeeEEE-----cCCcccEEEEEe---cCCEEEEEeCCCcEEEEECC-CCcEEEEecccCccEEEEEEcCC--e
Q psy9182 258 VWDRVSLQCIKVL-----TGHTGSVLCLQY---DERVIISGSSDSTVRVWDVN-TGEMVNTLIHHCEAVLHLRFSNG--M 326 (486)
Q Consensus 258 i~d~~~~~~~~~~-----~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~i~~~~~~~~--~ 326 (486)
+||+.+++.+..+ .+|...|.++.+ +++++++|+.||.|++||++ .++.+..+.+|...|.+++|+|+ .
T Consensus 184 ~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 263 (380)
T 3iz6_a 184 LWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQR 263 (380)
T ss_dssp EECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSE
T ss_pred EEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCe
Confidence 9999999998887 678999999988 67899999999999999998 45778889999999999999865 8
Q ss_pred EEEEeCCCcEEEEECCCCCceeeEEeee----cCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEE----cCC
Q psy9182 327 MVTCSKDRSIAVWDMVSPNEITLRRVLV----GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL----NGH 396 (486)
Q Consensus 327 l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~ 396 (486)
+++|+.||.|++||+++++......... .+...+.+++| +++++++|+.||.|++||+.+++.+..+ .+|
T Consensus 264 l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h 343 (380)
T 3iz6_a 264 FGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSH 343 (380)
T ss_dssp EEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSC
T ss_pred EEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCC
Confidence 9999999999999999886553322111 12234677777 8999999999999999999999988887 689
Q ss_pred cccEEEEEe--CCCEEEEEeCCCcEEEEECCCCe
Q psy9182 397 KRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA 428 (486)
Q Consensus 397 ~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~ 428 (486)
...|.++.+ ++.+|++|+.||+|++|++...+
T Consensus 344 ~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 344 EGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999988 48899999999999999997654
No 26
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-39 Score=309.60 Aligned_cols=319 Identities=17% Similarity=0.236 Sum_probs=259.2
Q ss_pred cccccccCCccCcc-eEEEe----------ecCceeeecccccccc---eeeecCcccceeEEEeecceeEecCCCCcee
Q psy9182 104 QRDFISLLPNFDEK-YIVSA----------SGDRTIKVWNTSSCEF---VRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169 (486)
Q Consensus 104 ~~~~~~~~~s~~~~-~l~tg----------~~dg~v~iWd~~~~~~---~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~ 169 (486)
...+.+++++|+++ +|++| +.||.|+|||+.+++. +..+ .|...|.+++|+
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s-------------- 76 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWS-------------- 76 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEEC--------------
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEEC--------------
Confidence 35688999999997 99999 8999999999998863 3333 588899999997
Q ss_pred ccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCcc--ceEEEEeC-CCE
Q psy9182 170 YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSK--GVYCLQYD-DHK 246 (486)
Q Consensus 170 ~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~-~~~ 246 (486)
+++.+|++++.||.|++||+.+.... ...... ...+.. ..++++++ +.+
T Consensus 77 -~~~~~l~~~~~dg~v~vw~~~~~~~~------------------------~~~~~~---~~~h~~~v~~~~~~~~~~~~ 128 (416)
T 2pm9_A 77 -HNNKIIAGALDNGSLELYSTNEANNA------------------------INSMAR---FSNHSSSVKTVKFNAKQDNV 128 (416)
T ss_dssp -SSSSCEEEEESSSCEEEECCSSTTSC------------------------CCEEEE---CCCSSSCCCEEEECSSSTTB
T ss_pred -CCCCeEEEEccCCeEEEeeccccccc------------------------ccchhh---ccCCccceEEEEEcCCCCCE
Confidence 57888999999999999998542100 001111 122333 34455666 889
Q ss_pred EEEEecCCeEEEEECCCce------eeE---EEcCCcccEEEEEe--c-CCEEEEEeCCCcEEEEECCCCcEEEEeccc-
Q psy9182 247 IVSGLRDNTIKVWDRVSLQ------CIK---VLTGHTGSVLCLQY--D-ERVIISGSSDSTVRVWDVNTGEMVNTLIHH- 313 (486)
Q Consensus 247 l~~~~~dg~i~i~d~~~~~------~~~---~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~- 313 (486)
+++++.||.|++||+.+++ ... .+..|...|.+++| + +.++++++.||.|++||+++++.+..+..+
T Consensus 129 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 208 (416)
T 2pm9_A 129 LASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS 208 (416)
T ss_dssp EEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC
T ss_pred EEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc
Confidence 9999999999999999876 332 23678899999999 4 679999999999999999999999888776
Q ss_pred -----CccEEEEEEcCC---eEEEEeCCC---cEEEEECCCCCceeeEEeee-cCcccEEEEEe---CCCEEEEEeCCCc
Q psy9182 314 -----CEAVLHLRFSNG---MMVTCSKDR---SIAVWDMVSPNEITLRRVLV-GHRAAVNVVDF---DEKYIVSASGDRT 378 (486)
Q Consensus 314 -----~~~i~~~~~~~~---~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~---~~~~l~~~~~d~~ 378 (486)
...+.+++|+++ .+++++.|+ .|++||++++... ...+. +|...|.++.| ++++|++++.|+.
T Consensus 209 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~ 286 (416)
T 2pm9_A 209 PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP--LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT 286 (416)
T ss_dssp CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC--SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE
T ss_pred cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC--cEEeecCccCceeEEEeCCCCCCeEEEEeCCCC
Confidence 788999999864 799999998 9999999986432 24455 78999999998 6789999999999
Q ss_pred EEEEECCCceEEEEEcCCcccEEEEEeC--C-CEEEEEeCCCcEEEEECCCCeeeEEec---------------------
Q psy9182 379 IKVWNTSSCEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGACLRVLE--------------------- 434 (486)
Q Consensus 379 i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~v~iwd~~~~~~~~~~~--------------------- 434 (486)
|++||+++++.+..+..|...|.++.|+ + .+|++++.||.|++||+.+++......
T Consensus 287 v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (416)
T 2pm9_A 287 VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREE 366 (416)
T ss_dssp EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------
T ss_pred EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccc
Confidence 9999999999999999999999999985 4 799999999999999998765432211
Q ss_pred --------------CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 435 --------------GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 435 --------------~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.|..++.+++| +|++|++++.||.|+||++.++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 367 SKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 15667777788 9999999999999999999864
No 27
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.4e-37 Score=298.24 Aligned_cols=312 Identities=16% Similarity=0.181 Sum_probs=254.1
Q ss_pred cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI 185 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i 185 (486)
...++.++|++++|++|+.||.|++||+.+++....+..| ..+....|+ +++.+|++++.||.|
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~---------------~~~~~l~~~~~dg~i 121 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAK---------------LQMRRFILGTTEGDI 121 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEEC---------------SSSCEEEEEETTSCE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEe---------------cCCCEEEEEECCCCE
Confidence 3557899999999999999999999999999888888777 233333444 577889999999999
Q ss_pred eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCCeEEEEECCC
Q psy9182 186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRVS 263 (486)
Q Consensus 186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~ 263 (486)
++||+.+..... ....+...+ +++++++++|++|+.||.|++||+.+
T Consensus 122 ~iwd~~~~~~~~-------------------------------~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 170 (420)
T 3vl1_A 122 KVLDSNFNLQRE-------------------------------IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD 170 (420)
T ss_dssp EEECTTSCEEEE-------------------------------ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEeCCCcceee-------------------------------ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 999975432211 112344444 45566889999999999999999999
Q ss_pred ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc---cCccEEEEEE----------------
Q psy9182 264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH---HCEAVLHLRF---------------- 322 (486)
Q Consensus 264 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~~~i~~~~~---------------- 322 (486)
++.+..+.+|...|.+++| ++++|++++.||.|++||+++++.+..+.. +...+.++.+
T Consensus 171 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 171 GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 9999999999999999999 788999999999999999999999988864 4556666665
Q ss_pred -----cC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCC-EEEEEeCCCcEEEEECCCceE-EE
Q psy9182 323 -----SN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK-YIVSASGDRTIKVWNTSSCEF-VR 391 (486)
Q Consensus 323 -----~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~iwd~~~~~~-~~ 391 (486)
++ ..+++++.||.|++||+++++... .....|...+.++.| ++. ++++++.||.|++||+++++. +.
T Consensus 251 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 251 NNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI--QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVG 328 (420)
T ss_dssp CTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE--EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE
T ss_pred cceEEcCCCCEEEEEcCCCeEEEEECCCCceeE--EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchh
Confidence 33 389999999999999999887543 344568889999999 566 999999999999999998754 67
Q ss_pred EEcC-CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCC---------eeeEEecCcccCeEEEEe--cCC---EEEEEeC
Q psy9182 392 TLNG-HKRGIACLQY-RDRLVVSGSSDNTIRLWDIECG---------ACLRVLEGHEELVRCIRF--DAK---RIVSGAY 455 (486)
Q Consensus 392 ~~~~-~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~---------~~~~~~~~h~~~v~~~~~--~~~---~l~s~~~ 455 (486)
.+.. |...+.++.+ ++++|++++.||.|++||+... .....+..|...|.+++| ++. .|++++.
T Consensus 329 ~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 329 EFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp EEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET
T ss_pred hhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC
Confidence 7776 6677888876 4789999999999999998763 223346678889999999 777 7888888
Q ss_pred CCcEEEEeCCC
Q psy9182 456 DGKIKVWNLVA 466 (486)
Q Consensus 456 dg~v~iwdl~~ 466 (486)
+|.+.+|+++.
T Consensus 409 ~g~~~~~~~~~ 419 (420)
T 3vl1_A 409 NNFCALYNLSN 419 (420)
T ss_dssp TTEEEEEESCC
T ss_pred CceEEEEeccC
Confidence 99999999864
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=283.52 Aligned_cols=287 Identities=20% Similarity=0.367 Sum_probs=223.5
Q ss_pred cccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccc
Q psy9182 135 SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIE 214 (486)
Q Consensus 135 ~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (486)
+.+++.++.+|...|.+++|++. +|++++.|++|++||+.....
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~-----------------~las~~~D~~i~lw~~~~~~~------------------- 46 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG-----------------ILATGSTDRKIKLVSVKYDDF------------------- 46 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT-----------------EEEEEESSSCEEEEECSSSCC-------------------
T ss_pred ccccceeeccCCCceeeeccCCC-----------------EEEEEcCCCEEEEEEecCCCe-------------------
Confidence 45678889999999999999742 588888999999999754210
Q ss_pred cccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCCeEEEEECC-------CceeeEEEcCCcccEEEEEe--c
Q psy9182 215 NNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRV-------SLQCIKVLTGHTGSVLCLQY--D 283 (486)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~v~~~~~--~ 283 (486)
.....+. ...|...+ ++++|++++|++|+.|+.|++||.. ..+.+..+.+|...|.+++| +
T Consensus 47 -------~~~~~~~-~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~ 118 (330)
T 2hes_X 47 -------TLIDVLD-ETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND 118 (330)
T ss_dssp -------EEEEEEC-TTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT
T ss_pred -------EEEEEEe-cCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC
Confidence 0111111 11144444 5566789999999999999999984 34567788999999999999 7
Q ss_pred CCEEEEEeCCCcEEEEECCC----CcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCc
Q psy9182 284 ERVIISGSSDSTVRVWDVNT----GEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357 (486)
Q Consensus 284 ~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 357 (486)
+++|++|+.|++|++||++. .+++..+..|...|.++.|+|+ +|++++.|+.|++||...+.. .....+.+|.
T Consensus 119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~-~~~~~~~~h~ 197 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW-ECVAVLNGHE 197 (330)
T ss_dssp SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEECCCS
T ss_pred CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe-eEEEEccCCC
Confidence 89999999999999999943 2567788899999999999864 899999999999999876531 2345677899
Q ss_pred ccEEEEEe--C--CCEEEEEeCCCcEEEEECCCc--------eEEEEEcC-CcccEEEEEeC-CCEEEEEeCCCcEEEEE
Q psy9182 358 AAVNVVDF--D--EKYIVSASGDRTIKVWNTSSC--------EFVRTLNG-HKRGIACLQYR-DRLVVSGSSDNTIRLWD 423 (486)
Q Consensus 358 ~~v~~~~~--~--~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~-~~~~v~~~~~~-~~~l~~~~~dg~v~iwd 423 (486)
..|.++.| + +.++++++.|++|++||++.+ .....+.. |...|.+++|+ +.+|++++.||.|++||
T Consensus 198 ~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~ 277 (330)
T 2hes_X 198 GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYE 277 (330)
T ss_dssp SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEE
Confidence 99999999 3 568999999999999998764 44555555 88999999996 66899999999999999
Q ss_pred CCCCe--eeEE-ecCccc-CeEEEEe----cCCEEEEEeCCCcEEEEeCCC
Q psy9182 424 IECGA--CLRV-LEGHEE-LVRCIRF----DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 424 ~~~~~--~~~~-~~~h~~-~v~~~~~----~~~~l~s~~~dg~v~iwdl~~ 466 (486)
..+++ .+.. +.+|.. .|.+++| ++++|++|+.||+|++||++.
T Consensus 278 ~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 278 EVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 98874 3333 367877 8999999 367899999999999999874
No 29
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-37 Score=340.10 Aligned_cols=365 Identities=23% Similarity=0.409 Sum_probs=293.1
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeec----ceeEecCCCCceecc------
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD----RLVVSGSSDNTIRYR------ 171 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~----~~~~~~~~d~~i~~~------ 171 (486)
.|...|.++.++|++++|++|+.||.|+|||+.+++.+..+.+|...|.+++|++ ..+++++.|+.+++|
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence 5678899999999999999999999999999999999999999999999999965 378899999988864
Q ss_pred -------------------CcceeecCCCCCcceeeecccccccccCCCCCC------------------CCCCCCcc--
Q psy9182 172 -------------------DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGG------------------GPPPSGPS-- 212 (486)
Q Consensus 172 -------------------~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~------------------~~~~~~~~-- 212 (486)
++..+++++.||.|++||+.+............ .....+..
T Consensus 735 ~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 814 (1249)
T 3sfz_A 735 CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKII 814 (1249)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEE
T ss_pred hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEE
Confidence 467899999999999999977643222111000 00000000
Q ss_pred -----cccccccCc-eeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cC
Q psy9182 213 -----IENNWRMGK-FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE 284 (486)
Q Consensus 213 -----~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~ 284 (486)
....|.... .....+...........++++++..+++++.||.|++||+.++..+..+.+|...|.+++| ++
T Consensus 815 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg 894 (1249)
T 3sfz_A 815 VAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDG 894 (1249)
T ss_dssp EEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred EEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCC
Confidence 001111111 1122222233344556677889999999999999999999999999999999999999988 67
Q ss_pred CEEEEEeCCCcEEEEECC--------------------------------------------------------------
Q psy9182 285 RVIISGSSDSTVRVWDVN-------------------------------------------------------------- 302 (486)
Q Consensus 285 ~~l~~~~~dg~i~vwd~~-------------------------------------------------------------- 302 (486)
+.+++++.||.|++||+.
T Consensus 895 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 974 (1249)
T 3sfz_A 895 SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLE 974 (1249)
T ss_dssp SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSS
T ss_pred CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCC
Confidence 888888888888888743
Q ss_pred -----------------CCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEE
Q psy9182 303 -----------------TGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363 (486)
Q Consensus 303 -----------------~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~ 363 (486)
+++....+..|...|.+++|+++ .+++++.||.|++||+.+++.. ....|...+.++
T Consensus 975 ~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~v~~~ 1050 (1249)
T 3sfz_A 975 YVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV----FLQAHQETVKDF 1050 (1249)
T ss_dssp EEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE----CCBCCSSCEEEE
T ss_pred EEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE----EEecCCCcEEEE
Confidence 23334445567778888888764 8899999999999999887543 345788899999
Q ss_pred Ee-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCe
Q psy9182 364 DF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 440 (486)
Q Consensus 364 ~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v 440 (486)
.+ .+..+++++.|+.|++||+.+++....+.+|...|.++.+ +++++++++.||.|++||+.+++++..+.+|...|
T Consensus 1051 ~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v 1130 (1249)
T 3sfz_A 1051 RLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCV 1130 (1249)
T ss_dssp EECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCE
T ss_pred EEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcE
Confidence 99 5678899999999999999999999999999999998888 47899999999999999999999999999999999
Q ss_pred EEEEe--cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182 441 RCIRF--DAKRIVSGAYDGKIKVWNLVAALDP 470 (486)
Q Consensus 441 ~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~ 470 (486)
++++| ++++|++++.||.|++||+.++...
T Consensus 1131 ~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1131 RCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp EEEEECSSSSEEEEEETTSCCCEEESSSSCCC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCceE
Confidence 99999 8899999999999999999987643
No 30
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.8e-36 Score=281.19 Aligned_cols=292 Identities=24% Similarity=0.414 Sum_probs=236.5
Q ss_pred cccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcc
Q psy9182 133 TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPS 212 (486)
Q Consensus 133 ~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~ 212 (486)
.++.++..+|+||.+.|++++|+| .++.+|+||+.|++|++||+.+.....
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp--------------~~~~~l~S~s~D~~i~vWd~~~~~~~~--------------- 75 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTP--------------QFPDMILSASRDKTIIMWKLTRDETNY--------------- 75 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECT--------------TCTTEEEEEETTSCEEEEEECCSSSCS---------------
T ss_pred CCceEEEEEECCccCCEEEEEEeC--------------CCCCEEEEEcCCCeEEEEECCCCCccc---------------
Confidence 345566778999999999999984 135789999999999999986532110
Q ss_pred cccccccCceeEEEEeccCCCccc--eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE
Q psy9182 213 IENNWRMGKFLLQRINCRSENSKG--VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII 288 (486)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 288 (486)
......+ .+|... .+++++++++|++++.|+.|++|+............+...+....+ +++.++
T Consensus 76 --------~~~~~~l---~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 144 (340)
T 4aow_A 76 --------GIPQRAL---RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 144 (340)
T ss_dssp --------EEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred --------ceeeEEE---eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccce
Confidence 0111111 233444 4556678999999999999999999999998888888888877777 678999
Q ss_pred EEeCCCcEEEEECCCCcEE-EEecccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEE
Q psy9182 289 SGSSDSTVRVWDVNTGEMV-NTLIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363 (486)
Q Consensus 289 ~~~~dg~i~vwd~~~~~~~-~~~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~ 363 (486)
+++.|+.+++||+...... .....|...+..+.+.++ .+++++.|+.|++||+++++.. ..+.+|...|.++
T Consensus 145 s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~---~~~~~h~~~v~~~ 221 (340)
T 4aow_A 145 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK---TNHIGHTGYLNTV 221 (340)
T ss_dssp EEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE---EEECCCSSCEEEE
T ss_pred eecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee---eEecCCCCcEEEE
Confidence 9999999999999866543 344678889999998743 7889999999999999887543 5667899999999
Q ss_pred Ee--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEec------
Q psy9182 364 DF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLE------ 434 (486)
Q Consensus 364 ~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~------ 434 (486)
.| ++++|++++.|+.|++||+++.+.+..+..+ ..+.++.+. +..+++++.|+.|++||++++..+..+.
T Consensus 222 ~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 300 (340)
T 4aow_A 222 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVIST 300 (340)
T ss_dssp EECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC----
T ss_pred EECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceee
Confidence 98 7899999999999999999999999888765 568888885 5567778889999999999888776654
Q ss_pred ---CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 435 ---GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 435 ---~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
+|...|++++| ++++|++|+.||.|+|||+.++.
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 67889999999 88999999999999999999764
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.8e-36 Score=277.36 Aligned_cols=227 Identities=26% Similarity=0.465 Sum_probs=204.3
Q ss_pred EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i 317 (486)
++|+++++++|+.||.|++||+.+++.+..+..|...|.++.| ++++|++|+.|+.|++||+.+++.+..+..|...|
T Consensus 21 fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v 100 (304)
T 2ynn_A 21 FHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI 100 (304)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcE
Confidence 3567888999999999999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred EEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182 318 LHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRT 392 (486)
Q Consensus 318 ~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~ 392 (486)
.+++|+++ ++++|+.|+.|++||++++... ...+.+|...|.++.| ++.++++|+.|+.|++||++++.....
T Consensus 101 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 178 (304)
T 2ynn_A 101 RSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL--EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT 178 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEGGGTTEE--EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE
T ss_pred EEEEEcCCCCEEEEECCCCeEEEEECCCCcch--hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence 99999865 8999999999999999876543 3567789999999999 457999999999999999988877666
Q ss_pred Ec-CCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 393 LN-GHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 393 ~~-~~~~~v~~~~~----~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
+. +|...+..+.+ ++.+|++|+.|+.|++||+++++++..+.+|...|.+++| ++.+|++|+.||+|++||+.
T Consensus 179 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 179 LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp EECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred eccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 65 55677888877 3679999999999999999999999999999999999999 77899999999999999998
Q ss_pred CCC
Q psy9182 466 AAL 468 (486)
Q Consensus 466 ~~~ 468 (486)
+..
T Consensus 259 ~~~ 261 (304)
T 2ynn_A 259 TYK 261 (304)
T ss_dssp TCC
T ss_pred CCc
Confidence 754
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.1e-37 Score=286.46 Aligned_cols=274 Identities=19% Similarity=0.377 Sum_probs=222.7
Q ss_pred ccccccccccCC-----cc-CcceEEEeecCceeeecccccc-------cceeeecCcccceeEEEeecceeEecCCCCc
Q psy9182 101 PMLQRDFISLLP-----NF-DEKYIVSASGDRTIKVWNTSSC-------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 167 (486)
Q Consensus 101 ~~~~~~~~~~~~-----s~-~~~~l~tg~~dg~v~iWd~~~~-------~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~ 167 (486)
..|...|.++.+ ++ ++++|++|+.||+|++||+.++ .....+.+|...|.+++|+
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~------------ 85 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALS------------ 85 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEEC------------
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEEC------------
Confidence 357778888887 65 8999999999999999998753 3456677787777777763
Q ss_pred eeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE
Q psy9182 168 IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI 247 (486)
Q Consensus 168 i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 247 (486)
+++.++
T Consensus 86 --------------------------------------------------------------------------~~~~~l 91 (343)
T 2xzm_R 86 --------------------------------------------------------------------------QENCFA 91 (343)
T ss_dssp --------------------------------------------------------------------------SSTTEE
T ss_pred --------------------------------------------------------------------------CCCCEE
Confidence 456778
Q ss_pred EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec---ccCccEEEEEE
Q psy9182 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI---HHCEAVLHLRF 322 (486)
Q Consensus 248 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~i~~~~~ 322 (486)
++|+.|++|++||+.+++.+..+.+|...|.+++| ++++|++++.|+.|++||+.. ....... .|...+.++.|
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeee
Confidence 89999999999999999999999999999999999 788999999999999999984 4443333 67888999999
Q ss_pred cC------------CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-c
Q psy9182 323 SN------------GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS-C 387 (486)
Q Consensus 323 ~~------------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~-~ 387 (486)
++ .++++++.|+.|++||... .....+.+|...|.+++| ++++|++++.|+.|++||+.. .
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 86 3699999999999999432 233556789999999999 789999999999999999954 4
Q ss_pred eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeE--Eec-----------CcccCeEEEEe--cCCEE
Q psy9182 388 EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR--VLE-----------GHEELVRCIRF--DAKRI 450 (486)
Q Consensus 388 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~--~~~-----------~h~~~v~~~~~--~~~~l 450 (486)
.....+. +...|.+++|+ +.+++ ++.|+.|++||+.+++... .+. +|...|.+++| ++++|
T Consensus 247 ~~~~~~~-~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 324 (343)
T 2xzm_R 247 YPQREFD-AGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKL 324 (343)
T ss_dssp SCSEEEE-CSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCE
T ss_pred ccceeec-CCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeE
Confidence 4444443 45568888885 56665 5568889999998776543 443 67888999999 88999
Q ss_pred EEEeCCCcEEEEeCCCC
Q psy9182 451 VSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 451 ~s~~~dg~v~iwdl~~~ 467 (486)
++|+.||.|++|+++++
T Consensus 325 ~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 325 FAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEEETTSEEEEEEEEEE
T ss_pred EEecCCceEEEEEEEcc
Confidence 99999999999998754
No 33
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=317.36 Aligned_cols=344 Identities=10% Similarity=0.132 Sum_probs=249.0
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecc-eeEecCCCCceeccC-------
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRYRD------- 172 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~-~~~~~~~d~~i~~~~------- 172 (486)
..|...|.+++|+|++++||+|+.||.|+|||..+++....+. |...|.+++|++. ++++++.|++|++||
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVL 92 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEE
Confidence 3567789999999999999999999999999998877666554 7889999999854 588899999888754
Q ss_pred -----------------cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCcc
Q psy9182 173 -----------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSK 235 (486)
Q Consensus 173 -----------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (486)
+.++++|+.||.|++||+.+....... +...|... .....+..
T Consensus 93 ~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~-------------i~~~~~~~-------~~~~~h~~ 152 (902)
T 2oaj_A 93 TTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFK-------------LDNLQKSS-------FFPAARLS 152 (902)
T ss_dssp EEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEE-------------ECCHHHHH-------TCSSSCCC
T ss_pred EEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccce-------------eccccccc-------cccccCCC
Confidence 467888899999999998654321000 00000000 00122333
Q ss_pred ce--EEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCC------------------cccEEEEEe--cCCEEEEEeC
Q psy9182 236 GV--YCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGH------------------TGSVLCLQY--DERVIISGSS 292 (486)
Q Consensus 236 ~v--~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------~~~v~~~~~--~~~~l~~~~~ 292 (486)
.+ ++++|+ +..+++|+.||.| +||+.+++.+..+..| ...|.+++| ++++|++|+.
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 44 445553 4689999999999 9999999999888766 467999999 7899999999
Q ss_pred CCcEEEEECCCCcEEEE--ec---c-------------cCccEEEEEEc----CC---eEEEEeCC-----CcEEEEE--
Q psy9182 293 DSTVRVWDVNTGEMVNT--LI---H-------------HCEAVLHLRFS----NG---MMVTCSKD-----RSIAVWD-- 340 (486)
Q Consensus 293 dg~i~vwd~~~~~~~~~--~~---~-------------~~~~i~~~~~~----~~---~l~~~~~d-----g~i~i~d-- 340 (486)
||.|++||+++++++.. +. . +...|.+++|+ ++ .+++|+.+ ..+.+|+
T Consensus 232 Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~ 311 (902)
T 2oaj_A 232 DNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLG 311 (902)
T ss_dssp TCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecC
Confidence 99999999999887654 21 1 23468888883 22 45555443 2455555
Q ss_pred ---------------------------------------------------------------------CCCCCceee--
Q psy9182 341 ---------------------------------------------------------------------MVSPNEITL-- 349 (486)
Q Consensus 341 ---------------------------------------------------------------------~~~~~~~~~-- 349 (486)
+.++.....
T Consensus 312 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~ 391 (902)
T 2oaj_A 312 YTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKAS 391 (902)
T ss_dssp ECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGG
T ss_pred CCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccc
Confidence 222110000
Q ss_pred --EEeeecCcccEEEEE----------------------------------e--CCCEEEEEeCCCcEEEEECCCceEE-
Q psy9182 350 --RRVLVGHRAAVNVVD----------------------------------F--DEKYIVSASGDRTIKVWNTSSCEFV- 390 (486)
Q Consensus 350 --~~~~~~~~~~v~~~~----------------------------------~--~~~~l~~~~~d~~i~iwd~~~~~~~- 390 (486)
...+..|...|+++. + ++++|++|+.|++|++||+.++...
T Consensus 392 ~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~ 471 (902)
T 2oaj_A 392 LFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQD 471 (902)
T ss_dssp GSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTT
T ss_pred cCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccC
Confidence 000011122333322 2 5779999999999999999887421
Q ss_pred ---EE--Ec-----CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCC-------------------------------
Q psy9182 391 ---RT--LN-----GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG------------------------------- 427 (486)
Q Consensus 391 ---~~--~~-----~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~------------------------------- 427 (486)
.. +. +|...|.+++|+ +++||+|+.||+|+|||+.++
T Consensus 472 ~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (902)
T 2oaj_A 472 NASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLV 551 (902)
T ss_dssp TBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEE
T ss_pred CceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccc
Confidence 11 11 788899999884 899999999999999999766
Q ss_pred --------------eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 428 --------------ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 428 --------------~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
+++..+.+|.+.|++|+| || +||+|+.|++|++||+++.
T Consensus 552 ~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 552 DVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp ECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred cccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence 346788899999999999 88 9999999999999998754
No 34
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-36 Score=308.16 Aligned_cols=322 Identities=15% Similarity=0.258 Sum_probs=269.6
Q ss_pred cccccccccccCCccCcceEEEeecCceeeecccccc----cceeeecCcccc-eeEEEeecceeEecCCCCceecc--C
Q psy9182 100 KPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC----EFVRTLNGHKRG-IACLQYRDRLVVSGSSDNTIRYR--D 172 (486)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~----~~~~~l~~h~~~-V~~~~~~~~~~~~~~~d~~i~~~--~ 172 (486)
+..+...+.+++++|++++|++++ ++.|+|||+.++ +.+..+.+|... |.+++|+ + +
T Consensus 14 ~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~s---------------p~~~ 77 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFS---------------PIKG 77 (615)
T ss_dssp CCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEEC---------------SSTT
T ss_pred CCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEEC---------------cCCC
Confidence 345678899999999999999998 789999999999 899999999999 9999997 6 7
Q ss_pred cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec
Q psy9182 173 EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR 252 (486)
Q Consensus 173 ~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 252 (486)
+.+|++++.||.|++||+.++..... ........+.. .......++++++++++++++.
T Consensus 78 ~~~l~s~~~dg~v~vw~~~~~~~~~~--------------------~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~ 136 (615)
T 1pgu_A 78 SQYLCSGDESGKVIVWGWTFDKESNS--------------------VEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGE 136 (615)
T ss_dssp CCEEEEEETTSEEEEEEEEEEGGGTE--------------------EEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEEC
T ss_pred CCEEEEecCCCEEEEEeCCCCccccc--------------------ccccccchhhc-ccccEEEEEEeCCCCEEEEecc
Confidence 88899999999999999864311000 00011122221 2233445566778999999998
Q ss_pred C----CeEEEEECCCceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEECCCCcEEEEecccCc---cEEEEEE
Q psy9182 253 D----NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRF 322 (486)
Q Consensus 253 d----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~i~~~~~ 322 (486)
+ +.|.+|| .++.+..+.+|...|.++.| +++ .+++++.||.|++||+.+++.+..+..|.. .|.+++|
T Consensus 137 ~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 214 (615)
T 1pgu_A 137 GRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF 214 (615)
T ss_dssp CSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE
T ss_pred CCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEE
Confidence 8 6888887 66788889999999999999 454 899999999999999999999999999998 9999999
Q ss_pred cCC---eEEEEeCCCcEEEEECCCCCceeeEEee-e---cCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182 323 SNG---MMVTCSKDRSIAVWDMVSPNEITLRRVL-V---GHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLN 394 (486)
Q Consensus 323 ~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~---~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 394 (486)
+++ .+++++.||.|++||+.+++.. ..+ . .|...|.++.| +++++++++.|+.|++||+++++.+..+.
T Consensus 215 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 215 SPDSGEFVITVGSDRKISCFDGKSGEFL---KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp CSTTCCEEEEEETTCCEEEEETTTCCEE---EECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCEe---EEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 855 8999999999999999988754 333 4 78999999999 88999999999999999999999999988
Q ss_pred CC----cccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182 395 GH----KRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 395 ~~----~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~ 465 (486)
.+ ...+.++.+ +++++++++.||.|++||+.+++.+..+.+|...|++++| +. |++++.||.|++||+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP-LISGSYDGRIMEWSSS 365 (615)
T ss_dssp CCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT-TEEEETTSCEEETTTT
T ss_pred CCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC-cEEECCCCeEEEEEch
Confidence 77 355666666 6999999999999999999999999999999999999988 66 8888888888888865
No 35
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.3e-37 Score=335.77 Aligned_cols=339 Identities=23% Similarity=0.373 Sum_probs=271.8
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceeccC------
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD------ 172 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~~------ 172 (486)
..|...|.+++++|++++|++|+.||+|++||+.+++.+.++.+|...|.+++|+ ++.+++++.|+.+++||
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL 691 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce
Confidence 4577889999999999999999999999999999999999999999999999997 44677777777776643
Q ss_pred ---------------------cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccC
Q psy9182 173 ---------------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS 231 (486)
Q Consensus 173 ---------------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (486)
...+++++.|+.|++||+.++.... .+. .+
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~----------------------------~~~-~h 742 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN----------------------------TMF-GH 742 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE----------------------------EEC-CC
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh----------------------------eec-CC
Confidence 2246677777777777765433211 111 11
Q ss_pred CCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEE-----------------------------------------
Q psy9182 232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL----------------------------------------- 270 (486)
Q Consensus 232 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----------------------------------------- 270 (486)
......++++++++.+++++.||.|++||+.+++....+
T Consensus 743 ~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~ 822 (1249)
T 3sfz_A 743 TNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL 822 (1249)
T ss_dssp SSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEE
T ss_pred CCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEE
Confidence 122333455667778888888888888877665443322
Q ss_pred -------------c-CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182 271 -------------T-GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK 332 (486)
Q Consensus 271 -------------~-~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~ 332 (486)
. +|...|.++.+ ++.++++++.||.|++||+.++..+..+.+|...|.+++|+++ .+++++.
T Consensus 823 ~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 823 LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASD 902 (1249)
T ss_dssp EEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeC
Confidence 1 57777888887 7899999999999999999999999999999999999999865 8999999
Q ss_pred CCcEEEEECCCCCc------------------------------------------------------------------
Q psy9182 333 DRSIAVWDMVSPNE------------------------------------------------------------------ 346 (486)
Q Consensus 333 dg~i~i~d~~~~~~------------------------------------------------------------------ 346 (486)
||.|++||+.+...
T Consensus 903 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~ 982 (1249)
T 3sfz_A 903 DQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED 982 (1249)
T ss_dssp TSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC
Confidence 99999998542100
Q ss_pred ----------eeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEEEE
Q psy9182 347 ----------ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSG 413 (486)
Q Consensus 347 ----------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~ 413 (486)
........+|...|.++.| +++++++++.||.|++||+.+++.. .+..|...+.++.+. +..++++
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~v~~~~~~~~~~l~~~ 1061 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRLLQDSRLLSW 1061 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE-CCBCCSSCEEEEEECSSSEEEEE
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE-EEecCCCcEEEEEEcCCCcEEEE
Confidence 0011233467788888888 7889999999999999999998876 456899999999985 6789999
Q ss_pred eCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 414 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 414 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
+.||.|++||+.+++.+..+.+|...|++++| ++++|++++.||+|++||+.++..
T Consensus 1062 ~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~ 1119 (1249)
T 3sfz_A 1062 SFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP 1119 (1249)
T ss_dssp ESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC
T ss_pred ECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce
Confidence 99999999999999999999999999999999 888999999999999999987653
No 36
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=317.92 Aligned_cols=345 Identities=13% Similarity=0.109 Sum_probs=247.9
Q ss_pred ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceeccC--------
Q psy9182 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-------- 172 (486)
Q Consensus 103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~~-------- 172 (486)
+...|.+++|+| +++|++++.|++|+|||+.+++.+..+. |...|++++|+ ++.+++++.|+.|++||
T Consensus 57 ~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS 134 (902)
T ss_dssp SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 456789999999 8899999999999999999999998886 66789999996 56899999999988764
Q ss_pred -----------------------------cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCcee
Q psy9182 173 -----------------------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFL 223 (486)
Q Consensus 173 -----------------------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (486)
+..+++++.||.| +||+.+..................... .
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~--------~- 204 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFS--------E- 204 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTC--------C-
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccc--------c-
Confidence 2468899999999 999976553322211100000000000 0
Q ss_pred EEEEeccCC--CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEE--E---cC-------------CcccEEEEEe-
Q psy9182 224 LQRINCRSE--NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV--L---TG-------------HTGSVLCLQY- 282 (486)
Q Consensus 224 ~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~---~~-------------~~~~v~~~~~- 282 (486)
..... .....++++|++.+|++|+.||.|++||+.+++++.. + .. |...|.+++|
T Consensus 205 ----~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~ 280 (902)
T 2oaj_A 205 ----KTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWM 280 (902)
T ss_dssp ----CTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEE
T ss_pred ----ccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEE
Confidence 00111 2234456677899999999999999999998887653 2 11 2346777777
Q ss_pred ---cC---CEEEEEeCC---------------------------------------------------------------
Q psy9182 283 ---DE---RVIISGSSD--------------------------------------------------------------- 293 (486)
Q Consensus 283 ---~~---~~l~~~~~d--------------------------------------------------------------- 293 (486)
++ .++++|+.|
T Consensus 281 ~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g 360 (902)
T 2oaj_A 281 CENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAG 360 (902)
T ss_dssp ECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHH
T ss_pred ecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCC
Confidence 21 345555333
Q ss_pred -------------CcEEEEECCCCcEEEE-------ecccCccEEEEEE-------------------------------
Q psy9182 294 -------------STVRVWDVNTGEMVNT-------LIHHCEAVLHLRF------------------------------- 322 (486)
Q Consensus 294 -------------g~i~vwd~~~~~~~~~-------~~~~~~~i~~~~~------------------------------- 322 (486)
|.|++||+.++..... +..|...|.++++
T Consensus 361 ~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~s 440 (902)
T 2oaj_A 361 CHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQ 440 (902)
T ss_dssp TBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCC
T ss_pred CCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCc
Confidence 3344444433322211 1112234544444
Q ss_pred ---cC--CeEEEEeCCCcEEEEECCCCCcee--eEEe-e-----ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc
Q psy9182 323 ---SN--GMMVTCSKDRSIAVWDMVSPNEIT--LRRV-L-----VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC 387 (486)
Q Consensus 323 ---~~--~~l~~~~~dg~i~i~d~~~~~~~~--~~~~-~-----~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~ 387 (486)
++ ..+++|+.|++|++||+.++.... .... + .+|...|.+++| ++++||+|+.||+|++||+.++
T Consensus 441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred ccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 33 389999999999999998874321 1111 1 178889999999 8999999999999999998765
Q ss_pred ---------------------------------------------eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEE
Q psy9182 388 ---------------------------------------------EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIR 420 (486)
Q Consensus 388 ---------------------------------------------~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~ 420 (486)
+++..+.+|.+.|++++++ | +||+|+.|++|+
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~ 599 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLM 599 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEE
Confidence 2467888999999999984 7 999999999999
Q ss_pred EEECCCCeeeE--E---ec-CcccCeEEEEec----------CCEEEEEeCCCcEEEEeC
Q psy9182 421 LWDIECGACLR--V---LE-GHEELVRCIRFD----------AKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 421 iwd~~~~~~~~--~---~~-~h~~~v~~~~~~----------~~~l~s~~~dg~v~iwdl 464 (486)
+||++++..+. . +. +|...|++|+|. +.+|++|+.||+|++||+
T Consensus 600 lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 600 LIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 99999887664 2 32 899999999996 358999999999999999
No 37
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-36 Score=287.32 Aligned_cols=225 Identities=32% Similarity=0.560 Sum_probs=208.1
Q ss_pred EeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEE
Q psy9182 241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318 (486)
Q Consensus 241 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~ 318 (486)
+|++.++++|+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||+|++||+.+++++..+.+|...|.
T Consensus 117 ~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~ 196 (410)
T 1vyh_C 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196 (410)
T ss_dssp CSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE
Confidence 356778999999999999999999999999999999999999 688999999999999999999999999999999999
Q ss_pred EEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182 319 HLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN 394 (486)
Q Consensus 319 ~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 394 (486)
+++|+++ .+++|+.|+.|++||++++... ..+.+|...|.++.+ ++.++++++.|+.|++||+.+++....+.
T Consensus 197 ~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~---~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~ 273 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273 (410)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTCCEE---EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEE---EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec
Confidence 9999864 8999999999999999988754 556789999999998 78999999999999999999999999999
Q ss_pred CCcccEEEEEeC----------------------CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEE
Q psy9182 395 GHKRGIACLQYR----------------------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI 450 (486)
Q Consensus 395 ~~~~~v~~~~~~----------------------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l 450 (486)
+|...|.++.|. +.+|++|+.|+.|++||+++++++..+.+|...|++++| ++++|
T Consensus 274 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l 353 (410)
T 1vyh_C 274 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFI 353 (410)
T ss_dssp CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCE
T ss_pred CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEE
Confidence 999999999985 458999999999999999999999999999999999999 78899
Q ss_pred EEEeCCCcEEEEeCCCCC
Q psy9182 451 VSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 451 ~s~~~dg~v~iwdl~~~~ 468 (486)
++|+.||.|++||+.++.
T Consensus 354 ~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 354 LSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp EEEETTTEEEEECCTTSC
T ss_pred EEEeCCCeEEEEECCCCc
Confidence 999999999999997543
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-36 Score=277.69 Aligned_cols=285 Identities=22% Similarity=0.366 Sum_probs=220.4
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccc--cceeee-cC-cccceeEEEeecceeEecCCCCceeccCccee
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC--EFVRTL-NG-HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~--~~~~~l-~~-h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l 176 (486)
..|...|.++.++++ +||+|+.||+|++||+.++ +.+..+ .+ |...|.+++|+ +++.+|
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~s---------------p~~~~l 73 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWR---------------PHTSLL 73 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEEC---------------TTSSEE
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEEC---------------CCCCEE
Confidence 356778999999877 9999999999999999875 445566 44 99999999998 577889
Q ss_pred ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCC
Q psy9182 177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDN 254 (486)
Q Consensus 177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg 254 (486)
++++.|++|++||+....... ........ ...|...+ +++++++++|++|+.|+
T Consensus 74 as~s~D~~v~iw~~~~~~~~~---------------------~~~~~~~~---~~~h~~~V~~v~~sp~g~~las~s~D~ 129 (330)
T 2hes_X 74 AAGSFDSTVSIWAKEESADRT---------------------FEMDLLAI---IEGHENEVKGVAWSNDGYYLATCSRDK 129 (330)
T ss_dssp EEEETTSCEEEEEC----------------------------CCCEEEEE---EC----CEEEEEECTTSCEEEEEETTS
T ss_pred EEEeCCCcEEEEEcccCcCcc---------------------ccceeEEE---EcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 999999999999974321000 00011111 22344444 45567899999999999
Q ss_pred eEEEEECCC----ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC--cEEEEecccCccEEEEEEcCC-
Q psy9182 255 TIKVWDRVS----LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG--EMVNTLIHHCEAVLHLRFSNG- 325 (486)
Q Consensus 255 ~i~i~d~~~----~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~i~~~~~~~~- 325 (486)
.|++||+.. .+++..+.+|...|.++.| ++.+|++|+.|++|++||..++ +++..+.+|...|.++.|+++
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 209 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE 209 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS
T ss_pred EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC
Confidence 999999943 3567888999999999999 7889999999999999999876 678888999999999999874
Q ss_pred ---eEEEEeCCCcEEEEECCCCCc-----eeeEEeeec-CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCce--EEEE-
Q psy9182 326 ---MMVTCSKDRSIAVWDMVSPNE-----ITLRRVLVG-HRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCE--FVRT- 392 (486)
Q Consensus 326 ---~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~-~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~--~~~~- 392 (486)
.+++|+.|+.|++||+..+.. ......+.+ |...|.++.| ++.++++++.||.|++||..+++ ....
T Consensus 210 ~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 289 (330)
T 2hes_X 210 GVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKR 289 (330)
T ss_dssp SSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred CeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEecc
Confidence 789999999999999875421 112233333 8899999999 56689999999999999998774 3333
Q ss_pred EcCCcc-cEEEEEeC----CCEEEEEeCCCcEEEEECCC
Q psy9182 393 LNGHKR-GIACLQYR----DRLVVSGSSDNTIRLWDIEC 426 (486)
Q Consensus 393 ~~~~~~-~v~~~~~~----~~~l~~~~~dg~v~iwd~~~ 426 (486)
+.+|.. .|.+++|. +++|++|+.||.|++||+++
T Consensus 290 ~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 290 ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 357876 89999884 57899999999999999864
No 39
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-35 Score=269.83 Aligned_cols=274 Identities=23% Similarity=0.397 Sum_probs=229.4
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
..|...|.++++ +++.+|++|+.||.|++||+.+++....+..|...|.+++|+ ++
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~---------------~~-------- 70 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYD---------------SE-------- 70 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEE---------------TT--------
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEEC---------------CC--------
Confidence 457788999999 899999999999999999999999899999999999998885 23
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
++++++++.||.|++|+
T Consensus 71 ---------------------------------------------------------------~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 71 ---------------------------------------------------------------KELLLFGGKDTMINGVP 87 (313)
T ss_dssp ---------------------------------------------------------------TTEEEEEETTSCEEEEE
T ss_pred ---------------------------------------------------------------CCEEEEecCCCeEEEEE
Confidence 34455555555555555
Q ss_pred CCC---ceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc---CCeEEEEeCCC
Q psy9182 261 RVS---LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDR 334 (486)
Q Consensus 261 ~~~---~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg 334 (486)
+.. .+.+..+.+|...|.++.++++++++++.||.|++|| .++....+..|...+.++.+. ++.+++++.||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred eeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence 433 2445667789999999999999999999999999999 678888888899999998885 45999999999
Q ss_pred cEEEEECCCCCceeeEEeeec-CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEE
Q psy9182 335 SIAVWDMVSPNEITLRRVLVG-HRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVV 411 (486)
Q Consensus 335 ~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~ 411 (486)
.|++||... ....... |...+.++.+ ....+++++.|+.|++||+++++.+..+.+|...+.++.++ ...++
T Consensus 166 ~i~i~d~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 240 (313)
T 3odt_A 166 TIKLWQNDK-----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIV 240 (313)
T ss_dssp CEEEEETTE-----EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEE
T ss_pred CEEEEecCc-----eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEE
Confidence 999999322 2233344 8889999998 33349999999999999999999999999999999999996 23799
Q ss_pred EEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
+++.||.|++||+++++.+..+..|...|.+++| ++. +++++.||.|++||+.++..
T Consensus 241 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 241 SCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred EEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 9999999999999999999999999999999999 555 77899999999999987654
No 40
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.3e-35 Score=283.83 Aligned_cols=280 Identities=15% Similarity=0.248 Sum_probs=234.3
Q ss_pred ccccccccccCCccCcceEEEeecCceeeeccccccc------ceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~------~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~ 174 (486)
..|...|.++.++| ++|++|+.||.|++||+.+++ .+..+.+|...|.+++|++ +
T Consensus 13 ~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---------------~-- 73 (397)
T 1sq9_A 13 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ---------------A-- 73 (397)
T ss_dssp SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE---------------E--
T ss_pred hhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec---------------c--
Confidence 45778899999988 799999999999999999988 7888999999999998863 1
Q ss_pred eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC---CEEEEEe
Q psy9182 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD---HKIVSGL 251 (486)
Q Consensus 175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~ 251 (486)
...++ .+|++++
T Consensus 74 -----------------------------------------------------------------~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 74 -----------------------------------------------------------------IERDAFELCLVATTS 88 (397)
T ss_dssp -----------------------------------------------------------------EETTTEEEEEEEEEE
T ss_pred -----------------------------------------------------------------cccCCccccEEEEEc
Confidence 00113 4555666
Q ss_pred cCCeEEEEECCCcee-----eEEEcCC-----cccEEEEEec------CCE-EEEEeCCCcEEEEECCC------CcEEE
Q psy9182 252 RDNTIKVWDRVSLQC-----IKVLTGH-----TGSVLCLQYD------ERV-IISGSSDSTVRVWDVNT------GEMVN 308 (486)
Q Consensus 252 ~dg~i~i~d~~~~~~-----~~~~~~~-----~~~v~~~~~~------~~~-l~~~~~dg~i~vwd~~~------~~~~~ 308 (486)
.||.|++||+.+++. ...+..| ...|.++.|. +++ |++++.||.|++||+++ ++.+.
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence 666666666555554 6677777 5889888876 678 99999999999999988 65554
Q ss_pred -----Ee-------cccCccEEEEEEcCC-eEEEEeCCCcEEEEECCCCCceeeEEeeec---C---cccEEEEEe--CC
Q psy9182 309 -----TL-------IHHCEAVLHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVG---H---RAAVNVVDF--DE 367 (486)
Q Consensus 309 -----~~-------~~~~~~i~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~---~~~v~~~~~--~~ 367 (486)
.+ ..|...+.+++|+++ .+++++.||.|++||+++++.. ..+.. | ...+.++.| ++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPL---YNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEE---EEEECCC---CCCCCEEEEEECSST
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCcee---EEEeccccccccCCccceEEECCCC
Confidence 56 447888999999865 8999999999999999887544 44445 7 889999999 78
Q ss_pred CEEEEEeCC---CcEEEEECCCceEEEEEcC-------------CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCee
Q psy9182 368 KYIVSASGD---RTIKVWNTSSCEFVRTLNG-------------HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC 429 (486)
Q Consensus 368 ~~l~~~~~d---~~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~ 429 (486)
++|++++.| +.|++||+++++.+..+.. |...|.++.|+ +++|++++.||.|++||+++++.
T Consensus 246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 999999999 9999999999999999998 99999999995 88999999999999999999999
Q ss_pred eEEec------Cc---------------ccCeEEEEe--cC----------CEEEEEeCCCcEEEEeCCCC
Q psy9182 430 LRVLE------GH---------------EELVRCIRF--DA----------KRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 430 ~~~~~------~h---------------~~~v~~~~~--~~----------~~l~s~~~dg~v~iwdl~~~ 467 (486)
+..+. +| ...|++++| ++ ++|++++.||.|++||+.++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 326 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 99999 88 999999999 55 69999999999999999764
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.1e-36 Score=282.20 Aligned_cols=285 Identities=19% Similarity=0.363 Sum_probs=237.0
Q ss_pred hcccccccccccCCccC----cceEEEeecCceeeecccccccceeeecCc-----ccceeEEEeecceeEecCCCCcee
Q psy9182 99 LKPMLQRDFISLLPNFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGH-----KRGIACLQYRDRLVVSGSSDNTIR 169 (486)
Q Consensus 99 ~~~~~~~~~~~~~~s~~----~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h-----~~~V~~~~~~~~~~~~~~~d~~i~ 169 (486)
+...|...|.++.++|+ ...+++++.++.|++||+.+++.+..+..| ...|.+++|++..
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------- 81 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDS----------- 81 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECT-----------
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCC-----------
Confidence 34567889999999984 556777777889999999998877776643 3556666664200
Q ss_pred ccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEE
Q psy9182 170 YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS 249 (486)
Q Consensus 170 ~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 249 (486)
..++.+|++
T Consensus 82 -----------------------------------------------------------------------~~~~~~l~~ 90 (366)
T 3k26_A 82 -----------------------------------------------------------------------NTSHPLLAV 90 (366)
T ss_dssp -----------------------------------------------------------------------TTCCEEEEE
T ss_pred -----------------------------------------------------------------------CCCCCEEEE
Confidence 002568999
Q ss_pred EecCCeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEe---cccCccEEEEEEc
Q psy9182 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTL---IHHCEAVLHLRFS 323 (486)
Q Consensus 250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~~ 323 (486)
|+.||.|++||+.+++.+..+.+|...|.++.| ++++|++++.||.|++||+++++.+..+ ..|...|.+++|+
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 999999999999999999999999999999999 5689999999999999999999999888 6899999999998
Q ss_pred CC--eEEEEeCCCcEEEEECCCCCcee-------------------------eEEeeecCcccEEEEEeCCCEEEEEeCC
Q psy9182 324 NG--MMVTCSKDRSIAVWDMVSPNEIT-------------------------LRRVLVGHRAAVNVVDFDEKYIVSASGD 376 (486)
Q Consensus 324 ~~--~l~~~~~dg~i~i~d~~~~~~~~-------------------------~~~~~~~~~~~v~~~~~~~~~l~~~~~d 376 (486)
++ .+++++.||.|++||+++++... .......|...|.++.|+++++++++.|
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 250 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCE 250 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSS
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecC
Confidence 64 89999999999999998754321 1122334889999999999999999999
Q ss_pred CcEEEEECCCce--------------EEEEEcCCcccEEEEEe--C--CCEEEEEeCCCcEEEEECCCCe----eeEEec
Q psy9182 377 RTIKVWNTSSCE--------------FVRTLNGHKRGIACLQY--R--DRLVVSGSSDNTIRLWDIECGA----CLRVLE 434 (486)
Q Consensus 377 ~~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~v~iwd~~~~~----~~~~~~ 434 (486)
+.|++||+.+++ .+..+..|...+.++.+ + +++|++|+.||.|++||+.+++ ....+.
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 330 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT 330 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc
Confidence 999999988764 37788889888877766 5 8999999999999999999875 445777
Q ss_pred Cc--ccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 435 GH--EELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 435 ~h--~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
+| ...|++++| ++++|++++.||.|++||+.
T Consensus 331 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 331 HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 77 789999999 88999999999999999985
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=272.92 Aligned_cols=280 Identities=17% Similarity=0.285 Sum_probs=242.9
Q ss_pred hhcccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182 98 YLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177 (486)
Q Consensus 98 ~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~ 177 (486)
..-..|...|.++.++|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---------------------- 83 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVD---------------------- 83 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEEC----------------------
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEc----------------------
Confidence 3345678899999999999999999999999999999999999999999999998884
Q ss_pred cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK 257 (486)
Q Consensus 178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 257 (486)
+++++|++++.||.|+
T Consensus 84 ----------------------------------------------------------------~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 84 ----------------------------------------------------------------CFTKYCVTGSADYSIK 99 (369)
T ss_dssp ----------------------------------------------------------------TTSSEEEEEETTTEEE
T ss_pred ----------------------------------------------------------------CCCCEEEEEeCCCeEE
Confidence 3556788888888899
Q ss_pred EEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC-----CcEEEEECCCCc-----------EEEEecccCc--cE
Q psy9182 258 VWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD-----STVRVWDVNTGE-----------MVNTLIHHCE--AV 317 (486)
Q Consensus 258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-----g~i~vwd~~~~~-----------~~~~~~~~~~--~i 317 (486)
+||+.+++.+..+. +...+.++.| +++++++++.+ |.|++||+.++. ....+..+.. .+
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 99988888888887 7888999988 78899999998 999999987653 2333444444 89
Q ss_pred EEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182 318 LHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL 393 (486)
Q Consensus 318 ~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 393 (486)
.+++|+++ .+++++.||.|++||+++... ....+..|...|.++.| ++++|++++.|+.|++||+++++.+..+
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 99999854 899999999999999988432 23556678999999999 7899999999999999999999998888
Q ss_pred cCCcccEEEEEeC--CCEEEEEeCCC--------------cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC
Q psy9182 394 NGHKRGIACLQYR--DRLVVSGSSDN--------------TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY 455 (486)
Q Consensus 394 ~~~~~~v~~~~~~--~~~l~~~~~dg--------------~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~ 455 (486)
. +...+.++.++ ++++++++.++ .+++||+.+++.+..+.+|...|++++| ++++|++++.
T Consensus 257 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 257 E-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp E-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred c-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC
Confidence 8 67778888874 89999999988 8999999999999999999999999999 8899999999
Q ss_pred CCcEEEEeCCCC
Q psy9182 456 DGKIKVWNLVAA 467 (486)
Q Consensus 456 dg~v~iwdl~~~ 467 (486)
||.|++|++..+
T Consensus 336 dg~v~iw~~~~~ 347 (369)
T 3zwl_B 336 DGFIRLHHFEKS 347 (369)
T ss_dssp TSEEEEEEECHH
T ss_pred CCeEEEEECccc
Confidence 999999999864
No 43
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-34 Score=277.16 Aligned_cols=281 Identities=21% Similarity=0.388 Sum_probs=236.1
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecC-cccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS 179 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~-h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~ 179 (486)
+.+..++.....++++..+++++.||.|++||+.+++....+.. |...|.+++|+
T Consensus 88 ~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s------------------------ 143 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWS------------------------ 143 (401)
T ss_dssp TTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEEC------------------------
T ss_pred CCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEEC------------------------
Confidence 45555666656666677899999999999999999988777765 77778877774
Q ss_pred CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182 180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW 259 (486)
Q Consensus 180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~ 259 (486)
+++++|++|+.||.|++|
T Consensus 144 --------------------------------------------------------------~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 144 --------------------------------------------------------------HDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp --------------------------------------------------------------TTSSEEEEEETTSCEEEE
T ss_pred --------------------------------------------------------------CCCCEEEEECCCCeEEEE
Confidence 356778889999999999
Q ss_pred ECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC-CCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcE
Q psy9182 260 DRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN-TGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSI 336 (486)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i 336 (486)
|+.+++.+..+.+|...|.+++|+++.+++++.||.|++||++ .+..+..+..|...|.++.|+++ .+++|+.|+.|
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v 241 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVV 241 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeE
Confidence 9999999999999999999999999999999999999999998 56778888999999999999864 89999999999
Q ss_pred EEEECCCCCceeeEEeeecCcccEEEEEe--C-CCEEEEEe--CCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCE
Q psy9182 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--D-EKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRL 409 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~ 409 (486)
++||+++++.. ..+..|...|.++.| + ..++++++ .|+.|++||+.+++.+..+. +...+.++.|+ +++
T Consensus 242 ~iwd~~~~~~~---~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 317 (401)
T 4aez_A 242 QIWDARSSIPK---FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKE 317 (401)
T ss_dssp EEEETTCSSEE---EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSE
T ss_pred EEccCCCCCcc---EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCe
Confidence 99999987644 455678899999999 3 35677765 79999999999999998886 56779999884 788
Q ss_pred EEEE--eCCCcEEEEECCCCeeeE--EecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCCC
Q psy9182 410 VVSG--SSDNTIRLWDIECGACLR--VLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPR 471 (486)
Q Consensus 410 l~~~--~~dg~v~iwd~~~~~~~~--~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~ 471 (486)
++++ +.||.|++||+.+++... .+.+|...|.+++| ++.+|++++.||.|++||+.++....
T Consensus 318 l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 8884 489999999999876554 46789999999999 88999999999999999999876543
No 44
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.6e-35 Score=272.33 Aligned_cols=280 Identities=23% Similarity=0.385 Sum_probs=228.5
Q ss_pred ccccccccccCCccC-cceEEEeecCceeeeccccccc-----ceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182 101 PMLQRDFISLLPNFD-EKYIVSASGDRTIKVWNTSSCE-----FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~-~~~l~tg~~dg~v~iWd~~~~~-----~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~ 174 (486)
..|...|.+++++|+ +++|+||+.||+|+|||+.+++ +.+.+.+|...|.+++|+ +++.
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s---------------~dg~ 99 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS---------------SDGQ 99 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEEC---------------TTSS
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEEC---------------CCCC
Confidence 468899999999997 6899999999999999987654 567889999999999997 6788
Q ss_pred eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254 (486)
Q Consensus 175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 254 (486)
+|++++.|+.|++|+........ .............+.+++..+++++.|+
T Consensus 100 ~l~s~~~d~~i~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~l~s~s~d~ 150 (340)
T 4aow_A 100 FALSGSWDGTLRLWDLTTGTTTR-----------------------------RFVGHTKDVLSVAFSSDNRQIVSGSRDK 150 (340)
T ss_dssp EEEEEETTSEEEEEETTTTEEEE-----------------------------EEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEEcccccceEEeecccceee-----------------------------eecCCCCceeEEEEeecCccceeecCCC
Confidence 89999999999999975432111 1112233444556677889999999999
Q ss_pred eEEEEECCCceee-EEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182 255 TIKVWDRVSLQCI-KVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327 (486)
Q Consensus 255 ~i~i~d~~~~~~~-~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l 327 (486)
.+++||....... ....+|...+.++.+ ...++++++.|+.|++||+++++.+..+..|...|.+++|+++ ++
T Consensus 151 ~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 230 (340)
T 4aow_A 151 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 230 (340)
T ss_dssp CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEE
Confidence 9999998765543 445678899998887 2467899999999999999999999999999999999999864 89
Q ss_pred EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEc---------CCc
Q psy9182 328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLN---------GHK 397 (486)
Q Consensus 328 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~ 397 (486)
++|+.||.|++||+++.+... .+. +...+.++.+ .+..+++++.|+.|++||++++..+..+. +|.
T Consensus 231 ~s~s~Dg~i~iwd~~~~~~~~---~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~ 306 (340)
T 4aow_A 231 ASGGKDGQAMLWDLNEGKHLY---TLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEP 306 (340)
T ss_dssp EEEETTCEEEEEETTTTEEEE---EEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCC
T ss_pred EEEeCCCeEEEEEeccCceee---eec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCC
Confidence 999999999999999876543 222 3457888888 45567777789999999999888776654 678
Q ss_pred ccEEEEEeC--CCEEEEEeCCCcEEEEECCCCe
Q psy9182 398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 428 (486)
Q Consensus 398 ~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~ 428 (486)
..|++++|+ +++|++|+.||.|+|||+++|+
T Consensus 307 ~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 307 PQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 889999984 7899999999999999999886
No 45
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.1e-34 Score=274.77 Aligned_cols=279 Identities=20% Similarity=0.403 Sum_probs=233.6
Q ss_pred cccccccc--ccCCccCcceEEEeecCceeeecccccccceeeec--CcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182 101 PMLQRDFI--SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176 (486)
Q Consensus 101 ~~~~~~~~--~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~--~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l 176 (486)
|.+..|+. .+.+|++ ++||+|. |++|+|||..+|+.+..+. +|...|++++|+
T Consensus 100 p~~~~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fs--------------------- 156 (420)
T 4gga_A 100 PEIRNDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWI--------------------- 156 (420)
T ss_dssp TTCCCCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEEC---------------------
T ss_pred CCCcccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEEC---------------------
Confidence 55555653 4567765 4677664 8999999999999877664 677788888884
Q ss_pred ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182 177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI 256 (486)
Q Consensus 177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 256 (486)
+++++|++|+.||.|
T Consensus 157 -----------------------------------------------------------------pdg~~lasgs~Dg~v 171 (420)
T 4gga_A 157 -----------------------------------------------------------------KEGNYLAVGTSSAEV 171 (420)
T ss_dssp -----------------------------------------------------------------TTSSEEEEEETTSCE
T ss_pred -----------------------------------------------------------------CCCCEEEEEECCCeE
Confidence 467789999999999
Q ss_pred EEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcC--CeEEEEeCC
Q psy9182 257 KVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN--GMMVTCSKD 333 (486)
Q Consensus 257 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~--~~l~~~~~d 333 (486)
++||+.+++.+..+.+|...+.++++++..+++|+.|+.+++||.... ..+..+..|...+..+.+.+ ..+++++.|
T Consensus 172 ~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D 251 (420)
T 4gga_A 172 QLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND 251 (420)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecc
Confidence 999999999999999999999999999999999999999999998864 45677889999999999985 499999999
Q ss_pred CcEEEEECCCCCce-eeEEeeecCcccEEEEEe---CCCEEEEE--eCCCcEEEEECCCceEEEEEcCCcccEEEEEe--
Q psy9182 334 RSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF---DEKYIVSA--SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-- 405 (486)
Q Consensus 334 g~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~-- 405 (486)
+.+++||...++.. ........|...|.++.| ++..++++ +.|+.|++||+.++++...+..|.. +.++.+
T Consensus 252 ~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~-v~~~~~~~ 330 (420)
T 4gga_A 252 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-VCSILWSP 330 (420)
T ss_dssp SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC-EEEEEEET
T ss_pred ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc-eeeeeecC
Confidence 99999999876532 223456678899999998 45676664 4799999999999999999887654 555555
Q ss_pred CCCEEEEEe--CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 406 RDRLVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 406 ~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
+++.+++++ .|+.|+|||+.+++++..+.+|.+.|++++| ||++|+||+.||+|+|||+....
T Consensus 331 ~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 331 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 477777655 7999999999999999999999999999999 89999999999999999997643
No 46
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-35 Score=285.02 Aligned_cols=321 Identities=14% Similarity=0.215 Sum_probs=235.2
Q ss_pred ccccccccccCCcc-CcceEEEeecCceeeeccccc---ccc---eeeecCcccceeEEEeecceeEecCCCCceeccCc
Q psy9182 101 PMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSS---CEF---VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173 (486)
Q Consensus 101 ~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~---~~~---~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~ 173 (486)
..|...|.+++++| ++++|++|+.||+|+|||+.+ +.. ...+ +|...|.+++|+ +++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~---------------~~~ 123 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMI---------------PNF 123 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEEC---------------TTS
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEe---------------CCC
Confidence 34678899999999 999999999999999999987 432 2233 589999999997 577
Q ss_pred ceeecCCCCCcceeeecccc---cccccCCCCCCCCCCCCcccccccccCceeEEEEeccCC-CccceEEEE----eCCC
Q psy9182 174 FQIVSSSHDDTILIWDFLNY---SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSE-NSKGVYCLQ----YDDH 245 (486)
Q Consensus 174 ~~l~s~s~dg~i~vWd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~----~~~~ 245 (486)
..|++++.||.|++||++.. ...... ....+..+..... +...+.++. +++.
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~--------------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFL--------------------NCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEE--------------------EEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeecc--------------------ccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 78999999999999998521 111000 0011222221110 333444443 5789
Q ss_pred EEEEEecCCeEEEEECCCceeeEEEcC--CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec-ccCccEEEE
Q psy9182 246 KIVSGLRDNTIKVWDRVSLQCIKVLTG--HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHL 320 (486)
Q Consensus 246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~i~~~ 320 (486)
++++|+.||.|++||+.+++.+..+.+ |...|.+++| ++++|++|+.||.|++||+++++++..+. .+...|.++
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 999999999999999999999999988 8899999999 78999999999999999999999998886 677899999
Q ss_pred EEcCC------eEEEEeCCCcEEEEECCCCCceeeEEe---------------------eec--CcccEEEEEe-CCCEE
Q psy9182 321 RFSNG------MMVTCSKDRSIAVWDMVSPNEITLRRV---------------------LVG--HRAAVNVVDF-DEKYI 370 (486)
Q Consensus 321 ~~~~~------~l~~~~~dg~i~i~d~~~~~~~~~~~~---------------------~~~--~~~~v~~~~~-~~~~l 370 (486)
.+++. .+++|+.||.|++||+++++....... +.+ |...|.++.+ ++++|
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l 343 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKIL 343 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEE
Confidence 77643 899999999999999988765433221 112 6677888888 66799
Q ss_pred EEEeCCCcEEEEECCCceEEEEEcCCccc---EEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--
Q psy9182 371 VSASGDRTIKVWNTSSCEFVRTLNGHKRG---IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 445 (486)
Q Consensus 371 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-- 445 (486)
++++.|+.|++||+.+++....+.+|... .....+.......... |+...+........|...|++++|
T Consensus 344 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~h~~~I~~i~~~~ 417 (437)
T 3gre_A 344 LTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK------MKRTSTHSVDDSLYHHDIINSISTCE 417 (437)
T ss_dssp EEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE------CC-------------CCCEEEEEEEE
T ss_pred EecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe------cccccccccCcccccccceeeEeeec
Confidence 99999999999999999999999887543 2333333222211111 334445555666789999999999
Q ss_pred c--CCEEEEEeCCCcEEEEe
Q psy9182 446 D--AKRIVSGAYDGKIKVWN 463 (486)
Q Consensus 446 ~--~~~l~s~~~dg~v~iwd 463 (486)
+ +.+|++|+.||.|++|+
T Consensus 418 ~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 418 VDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SSSSEEEEEEETTSCEEEEC
T ss_pred cCCceEEEEEcCCceEEEeC
Confidence 4 56899999999999995
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.5e-35 Score=275.22 Aligned_cols=279 Identities=16% Similarity=0.204 Sum_probs=228.7
Q ss_pred cccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS 179 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~ 179 (486)
.|...|.++.++|++++|++|+.||.|++||+.+++ .+..+.+|...|.+++|+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~------------------------ 61 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA------------------------ 61 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEE------------------------
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEe------------------------
Confidence 467789999999999999999999999999999987 888999999999998885
Q ss_pred CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182 180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW 259 (486)
Q Consensus 180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~ 259 (486)
++++++++++.||.|++|
T Consensus 62 --------------------------------------------------------------~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 62 --------------------------------------------------------------PDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp --------------------------------------------------------------TTTTEEEEEETTSCEEEE
T ss_pred --------------------------------------------------------------CCCCEEEEEcCCCeEEEE
Confidence 244556666677777777
Q ss_pred ECCCceeeEE--EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE---EE-EecccCccEEEEEEcCC--eEEE
Q psy9182 260 DRVSLQCIKV--LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM---VN-TLIHHCEAVLHLRFSNG--MMVT 329 (486)
Q Consensus 260 d~~~~~~~~~--~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~---~~-~~~~~~~~i~~~~~~~~--~l~~ 329 (486)
|+.+++.... +..|...|.++.| +++++++++.||.|++||++.++. .. ....|...|.++.|+++ .+++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 7666654433 3568889999998 788999999999999999988762 33 33667889999999864 8999
Q ss_pred EeCCCcEEEEECCCCC---------------ceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182 330 CSKDRSIAVWDMVSPN---------------EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT 392 (486)
Q Consensus 330 ~~~dg~i~i~d~~~~~---------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~ 392 (486)
++.||.|++||++... .......+.+|...+.++.| ++++|++++.|+.|++||+++++.+..
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEE
Confidence 9999999999965210 11233556688899999999 788999999999999999999999999
Q ss_pred EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC--Cee--------------------------------e------
Q psy9182 393 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC--GAC--------------------------------L------ 430 (486)
Q Consensus 393 ~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~--~~~--------------------------------~------ 430 (486)
+..|...+.++.++ +.++++| .|+.|++|++.+ ++. .
T Consensus 240 ~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (372)
T 1k8k_C 240 LASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 318 (372)
T ss_dssp EECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------
T ss_pred EccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccc
Confidence 99999999999884 6666666 999999999987 421 0
Q ss_pred EEe-cCcccCeEEEEe---cC---CEEEEEeCCCcEEEEeCCCC
Q psy9182 431 RVL-EGHEELVRCIRF---DA---KRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 431 ~~~-~~h~~~v~~~~~---~~---~~l~s~~~dg~v~iwdl~~~ 467 (486)
..+ .+|...|++++| +| .+|++|+.||.|++||+.+.
T Consensus 319 ~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 319 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred ccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 223 489999999996 55 89999999999999998754
No 48
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2e-34 Score=295.41 Aligned_cols=274 Identities=24% Similarity=0.422 Sum_probs=228.9
Q ss_pred ccccccccccCCccCc-ceEEEeecCceeeecccccc-----cceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182 101 PMLQRDFISLLPNFDE-KYIVSASGDRTIKVWNTSSC-----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~-~~l~tg~~dg~v~iWd~~~~-----~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~ 174 (486)
..|...|.++++++++ ++|+||+.||+|++||+.+. .....+.+|...|.+++|+
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s------------------- 439 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS------------------- 439 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEEC-------------------
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEEC-------------------
Confidence 3688899999999875 78999999999999998764 3356677888888777764
Q ss_pred eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254 (486)
Q Consensus 175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 254 (486)
+++++|++|+.||
T Consensus 440 -------------------------------------------------------------------~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 440 -------------------------------------------------------------------SDGQFALSGSWDG 452 (694)
T ss_dssp -------------------------------------------------------------------TTSSEEEEEETTS
T ss_pred -------------------------------------------------------------------CCCCEEEEEeCCC
Confidence 4667889999999
Q ss_pred eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe---cccCccEEEEEEcCC----
Q psy9182 255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL---IHHCEAVLHLRFSNG---- 325 (486)
Q Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~~~~---- 325 (486)
.|++||+.+++....+.+|...|.+++| ++++|++|+.|++|++||.......... ..|...|.+++|+++
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 9999999999999999999999999999 7889999999999999998755433332 457888999999864
Q ss_pred eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403 (486)
Q Consensus 326 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 403 (486)
.+++++.|+.|++||+++.+.. ..+.+|...|.++.+ ++++|++++.|+.|++||+++++.+..+.. ...+.++
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~---~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~ 608 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLR---STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHAL 608 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEE
T ss_pred eEEEEeCCCeEEEEECCCCcEE---EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEE
Confidence 6999999999999999887643 567789999999999 789999999999999999999998887765 4568888
Q ss_pred EeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcc-------------------cCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182 404 QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-------------------ELVRCIRF--DAKRIVSGAYDGKIK 460 (486)
Q Consensus 404 ~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-------------------~~v~~~~~--~~~~l~s~~~dg~v~ 460 (486)
.++ +.+++++ .|+.|++||+++++.+..+..+. ..+++++| ++++|++|+.||.|+
T Consensus 609 ~~sp~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~ 687 (694)
T 3dm0_A 609 CFSPNRYWLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIR 687 (694)
T ss_dssp EECSSSSEEEEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEcCCCcEEEEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEE
Confidence 885 5555554 56779999999999888775432 13788999 899999999999999
Q ss_pred EEeCC
Q psy9182 461 VWNLV 465 (486)
Q Consensus 461 iwdl~ 465 (486)
+||+.
T Consensus 688 iW~i~ 692 (694)
T 3dm0_A 688 VWGIG 692 (694)
T ss_dssp EEEC-
T ss_pred EEecc
Confidence 99985
No 49
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-34 Score=264.66 Aligned_cols=235 Identities=23% Similarity=0.429 Sum_probs=210.3
Q ss_pred cCCCccceEEEEe------CCCEEEEEecCCeEEEEECCCcee--eEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182 230 RSENSKGVYCLQY------DDHKIVSGLRDNTIKVWDRVSLQC--IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVW 299 (486)
Q Consensus 230 ~~~~~~~v~~~~~------~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vw 299 (486)
...|...|.++.+ ++.+|++|+.|++|++||+..++. ...+.+|...|.++++ ++..+++++.|++|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 107 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 3467777777765 356899999999999999877654 4568899999999998 67899999999999999
Q ss_pred ECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC
Q psy9182 300 DVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG 375 (486)
Q Consensus 300 d~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 375 (486)
|+.+++.+..+..+...+.+++|+++ .+++++.||.|++||+++++.. ..+..+...+.++.| ++++|++++.
T Consensus 108 d~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~---~~~~~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 108 DLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE---YSLDTRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp ETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE---EEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee---EEecCCCceEEEEEECCCCCEEEEEcC
Confidence 99999999999988888999999865 9999999999999999988654 445577888999988 8899999999
Q ss_pred CCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEE
Q psy9182 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV 451 (486)
Q Consensus 376 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~ 451 (486)
|+.|++||+++++.+..+.+|...|.++.|+ +++|++|+.||.|++||+++++.+..+.+|...|.+++| ++.+|+
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 264 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFV 264 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEE
Confidence 9999999999999999999999999999984 789999999999999999999999999999999999999 889999
Q ss_pred EEeCCCcEEEEeCCCC
Q psy9182 452 SGAYDGKIKVWNLVAA 467 (486)
Q Consensus 452 s~~~dg~v~iwdl~~~ 467 (486)
+++.||+|++||+.++
T Consensus 265 s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGTR 280 (321)
T ss_dssp EEETTSCEEEEETTTT
T ss_pred EEeCCCcEEEEeCCCC
Confidence 9999999999999854
No 50
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=260.86 Aligned_cols=277 Identities=20% Similarity=0.390 Sum_probs=227.6
Q ss_pred ccccccc--cccCCccCcceEEEeecCceeeecccccccceeeec--CcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182 101 PMLQRDF--ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176 (486)
Q Consensus 101 ~~~~~~~--~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~--~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l 176 (486)
|.+..++ .++.+|+++ +||+| .|++|+|||+.+|+.++.+. +|...|.+++|+
T Consensus 20 p~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~--------------------- 76 (318)
T 4ggc_A 20 PEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWI--------------------- 76 (318)
T ss_dssp TTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEEC---------------------
T ss_pred CCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEEC---------------------
Confidence 4444554 457788876 66665 59999999999999888765 667778888774
Q ss_pred ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182 177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI 256 (486)
Q Consensus 177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 256 (486)
++++++++|+.||.|
T Consensus 77 -----------------------------------------------------------------~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 77 -----------------------------------------------------------------KEGNYLAVGTSSAEV 91 (318)
T ss_dssp -----------------------------------------------------------------TTSSEEEEEETTSEE
T ss_pred -----------------------------------------------------------------CCCCEEEEEECCCcE
Confidence 467789999999999
Q ss_pred EEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcC--CeEEEEeCC
Q psy9182 257 KVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN--GMMVTCSKD 333 (486)
Q Consensus 257 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~--~~l~~~~~d 333 (486)
++||+.+++.+..+.+|...+.++++++..+++++.++.+++|+...+ ..+..+..|...+..+.+.+ ..+++++.|
T Consensus 92 ~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d 171 (318)
T 4ggc_A 92 QLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND 171 (318)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC
Confidence 999999999999999999999999999999999999999999998876 45667788999999999875 489999999
Q ss_pred CcEEEEECCCCCce-eeEEeeecCcccEEEEEe---CCCEE--EEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--
Q psy9182 334 RSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF---DEKYI--VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-- 405 (486)
Q Consensus 334 g~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~---~~~~l--~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~-- 405 (486)
+.|++||+++++.. ........+...|.++.+ ++..+ ++++.++.|++||........... +...+..+.+
T Consensus 172 ~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~ 250 (318)
T 4ggc_A 172 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSP 250 (318)
T ss_dssp SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEET
T ss_pred cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecc
Confidence 99999999886543 223445567778888887 34444 456678999999999887766554 4555666655
Q ss_pred CCCEEEEEe--CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 406 RDRLVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 406 ~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
.+..+++++ .|+.|++||+++++++..+.+|.+.|++++| ++++|+|||.||+|+|||+..
T Consensus 251 ~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 251 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 466666554 7999999999999999999999999999999 889999999999999999964
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-33 Score=276.39 Aligned_cols=290 Identities=29% Similarity=0.517 Sum_probs=238.9
Q ss_pred eeeecccccc-cceeeecCcccce-eEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCC
Q psy9182 127 TIKVWNTSSC-EFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGG 204 (486)
Q Consensus 127 ~v~iWd~~~~-~~~~~l~~h~~~V-~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~ 204 (486)
.++.|..... .....+.+|...| .++.++ +.++++++.||+|++||+.+....
T Consensus 101 ~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~~-----------------~~~l~sgs~dg~i~vwd~~~~~~~-------- 155 (464)
T 3v7d_B 101 ILKNWYNPKFVPQRTTLRGHMTSVITCLQFE-----------------DNYVITGADDKMIRVYDSINKKFL-------- 155 (464)
T ss_dssp HHHHHHCTTCCCEEEEEECCSSSCEEEEEEE-----------------TTEEEEEETTSCEEEEETTTTEEE--------
T ss_pred hHhhhcCCCcCcceEEEcCCCCCcEEEEEEC-----------------CCEEEEEcCCCcEEEEECCCCcEE--------
Confidence 3345543332 3466889998875 667664 446888889999999997553321
Q ss_pred CCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-
Q psy9182 205 GPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY- 282 (486)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~- 282 (486)
.. ...|...+.++.+. +..+++|+.||.|++||+.+++.+..+.+|...|.++++
T Consensus 156 --------------------~~---~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 212 (464)
T 3v7d_B 156 --------------------LQ---LSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV 212 (464)
T ss_dssp --------------------EE---ECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred --------------------EE---EeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEe
Confidence 11 22466667666653 339999999999999999999999999999999999987
Q ss_pred ---cCCEEEEEeCCCcEEEEECCCCc-----------------------EEEEecccCccEEEEEEcCCeEEEEeCCCcE
Q psy9182 283 ---DERVIISGSSDSTVRVWDVNTGE-----------------------MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSI 336 (486)
Q Consensus 283 ---~~~~l~~~~~dg~i~vwd~~~~~-----------------------~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i 336 (486)
+++++++|+.||.|++||++++. .+..+.+|...+.++...++.+++++.||.|
T Consensus 213 ~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i 292 (464)
T 3v7d_B 213 EYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTL 292 (464)
T ss_dssp ESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCE
T ss_pred cCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeE
Confidence 45899999999999999998765 2556778889999999999999999999999
Q ss_pred EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEe
Q psy9182 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGS 414 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 414 (486)
++||+++++.. ..+.+|...|.++.+ +++++++++.||.|++||+++++++..+.+|...|.++.+++.+|++++
T Consensus 293 ~vwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s 369 (464)
T 3v7d_B 293 IVWDVAQMKCL---YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAA 369 (464)
T ss_dssp EEEETTTTEEE---EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEE
T ss_pred EEEECCCCcEE---EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEe
Confidence 99999887544 556789999999998 7889999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 415 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
.||.|++||+.+++...... |...+..++| ++++|++++ ||.|++||+.++..
T Consensus 370 ~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 370 ADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKL 424 (464)
T ss_dssp TTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCE
T ss_pred CCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcE
Confidence 99999999999887766653 4444555555 899999988 99999999998754
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2e-34 Score=277.74 Aligned_cols=270 Identities=17% Similarity=0.258 Sum_probs=226.1
Q ss_pred cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG 250 (486)
Q Consensus 171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 250 (486)
+++.+|++++.|+.+++||+.+........ ......+.++++++++|++|
T Consensus 66 ~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~l~~~ 115 (420)
T 3vl1_A 66 KVGSHLYKARLDGHDFLFNTIIRDGSKMLK------------------------------RADYTAVDTAKLQMRRFILG 115 (420)
T ss_dssp EEETTEEEEEETTEEEEEECCSEETTTTSC------------------------------SCCEEEEEEECSSSCEEEEE
T ss_pred ecCCeEEEEEcCCcEEEEEecccceeeEEe------------------------------cCCceEEEEEecCCCEEEEE
Confidence 688889999999999999986654332111 01223344567899999999
Q ss_pred ecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--e
Q psy9182 251 LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--M 326 (486)
Q Consensus 251 ~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~ 326 (486)
+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||.|++||+++++.+..+..|...|.+++|+++ .
T Consensus 116 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 195 (420)
T 3vl1_A 116 TTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN 195 (420)
T ss_dssp ETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE
Confidence 99999999999999999888999999999999 7889999999999999999999999999999999999999864 8
Q ss_pred EEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-----------------------CCCEEEEEeCCCcEEEEE
Q psy9182 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-----------------------DEKYIVSASGDRTIKVWN 383 (486)
Q Consensus 327 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-----------------------~~~~l~~~~~d~~i~iwd 383 (486)
+++++.|+.|++||+++++..........+...+.++.+ +++++++++.||.|++||
T Consensus 196 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 275 (420)
T 3vl1_A 196 VLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHN 275 (420)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEE
T ss_pred EEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEE
Confidence 999999999999999988765443333345555555554 677999999999999999
Q ss_pred CCCceEEEEEc-CCcccEEEEEeC--CC-EEEEEeCCCcEEEEECCCCee-eEEecC-cccCeEEEEe-cCCEEEEEeCC
Q psy9182 384 TSSCEFVRTLN-GHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGAC-LRVLEG-HEELVRCIRF-DAKRIVSGAYD 456 (486)
Q Consensus 384 ~~~~~~~~~~~-~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~~~~-~~~~~~-h~~~v~~~~~-~~~~l~s~~~d 456 (486)
+++++.+..+. .|...+.++.++ +. +|++|+.||.|++||+++++. +..+.. |...|.++.+ ++++|++++.|
T Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d 355 (420)
T 3vl1_A 276 VFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFD 355 (420)
T ss_dssp TTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTT
T ss_pred CCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCC
Confidence 99998877775 578899999996 45 999999999999999998754 677766 6778999988 88899999999
Q ss_pred CcEEEEeCCCCCCC
Q psy9182 457 GKIKVWNLVAALDP 470 (486)
Q Consensus 457 g~v~iwdl~~~~~~ 470 (486)
|.|++||+.....+
T Consensus 356 ~~v~iw~~~~~~~~ 369 (420)
T 3vl1_A 356 TSIKLDIISDPESE 369 (420)
T ss_dssp EEEEEEEECCTTCC
T ss_pred ccEEEEeccCCCCC
Confidence 99999999875444
No 53
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-35 Score=281.18 Aligned_cols=274 Identities=16% Similarity=0.234 Sum_probs=210.1
Q ss_pred ccccccccCCccCcceEEEeecCceeeecccccc--cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC--EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~--~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
+...|.++.++|++++|++|+.||.|+|||+.++ +.+..+.+|...|.+++|+ +++.+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s---------------~~~~~----- 69 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWA---------------PKSNR----- 69 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEEC---------------TTTCC-----
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEe---------------CCCCE-----
Confidence 4567999999999999999999999999999988 7888999999999999986 23334
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
|++++.||.|++||
T Consensus 70 ------------------------------------------------------------------l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 70 ------------------------------------------------------------------IVTCSQDRNAYVYE 83 (377)
T ss_dssp ------------------------------------------------------------------EEEEETTSSEEEC-
T ss_pred ------------------------------------------------------------------EEEEeCCCeEEEEE
Confidence 45555555555555
Q ss_pred CCCce---eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc---EEEEecc-cCccEEEEEEcCC--eEEE
Q psy9182 261 RVSLQ---CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE---MVNTLIH-HCEAVLHLRFSNG--MMVT 329 (486)
Q Consensus 261 ~~~~~---~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~-~~~~i~~~~~~~~--~l~~ 329 (486)
+.+++ ....+.+|...|.+++| ++++|++++.||.|++||+++++ ....+.. |...|.+++|+++ ++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 55444 45566779999999999 68899999999999999999887 3667777 8999999999865 8999
Q ss_pred EeCCCcEEEEECCCCC---------------ceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE---
Q psy9182 330 CSKDRSIAVWDMVSPN---------------EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF--- 389 (486)
Q Consensus 330 ~~~dg~i~i~d~~~~~---------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~--- 389 (486)
++.|+.|++||+.... .......+ +|...|.++.| ++++|++++.|+.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 9999999999986332 11223334 88999999999 788999999999999999999887
Q ss_pred -EEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCe--e-------------------------e---------
Q psy9182 390 -VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA--C-------------------------L--------- 430 (486)
Q Consensus 390 -~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~--~-------------------------~--------- 430 (486)
+..+.+|...|.++.| ++++|++|+.++.+ +|+...+. . .
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALR 321 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----------
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccc
Confidence 7888999999999988 57888888766655 66654211 0 0
Q ss_pred EEe----------------cCcccCeEEEEe---cCC---EEEEEeCCCcEEEEeC
Q psy9182 431 RVL----------------EGHEELVRCIRF---DAK---RIVSGAYDGKIKVWNL 464 (486)
Q Consensus 431 ~~~----------------~~h~~~v~~~~~---~~~---~l~s~~~dg~v~iwdl 464 (486)
..+ ..|...|+++++ ++. .|+|+|.||.|++||+
T Consensus 322 ~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 322 STFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 111 139999999997 333 6999999999999996
No 54
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.9e-34 Score=273.19 Aligned_cols=276 Identities=17% Similarity=0.263 Sum_probs=219.1
Q ss_pred ccccccccccCCccCc-ceEEEeecCceeeecccccccceeeec--CcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182 101 PMLQRDFISLLPNFDE-KYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~-~~l~tg~~dg~v~iWd~~~~~~~~~l~--~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~ 177 (486)
..|...|.++.++|++ ++|++|+.||.|+|||+.+++....+. +|...|.+++|++.
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~-------------------- 129 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF-------------------- 129 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT--------------------
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC--------------------
Confidence 4567889999999999 999999999999999999988877765 69999999988630
Q ss_pred cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK 257 (486)
Q Consensus 178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 257 (486)
++.++++++.||.|+
T Consensus 130 -----------------------------------------------------------------~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 130 -----------------------------------------------------------------NTNQLFVSSIRGATT 144 (383)
T ss_dssp -----------------------------------------------------------------EEEEEEEEETTTEEE
T ss_pred -----------------------------------------------------------------CCCEEEEEeCCCEEE
Confidence 234466666666666
Q ss_pred EEECCCceeeEEEcC---CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEE
Q psy9182 258 VWDRVSLQCIKVLTG---HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVT 329 (486)
Q Consensus 258 i~d~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~ 329 (486)
+||+.+ ..+..+.. |...|.+++| +++++++|+.||.|++||+ +++.+..+..|...|.+++|+++ .+++
T Consensus 145 iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 145 LRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 666664 33334433 4477888888 7899999999999999999 57888899999999999999865 7999
Q ss_pred EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-------c-
Q psy9182 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-------R- 398 (486)
Q Consensus 330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------~- 398 (486)
++.|+.|++||+++.+.........+|...|.++.| ++++|++++.|+.|++||+++++....+..|. .
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTP 302 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCC
T ss_pred EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccc
Confidence 999999999999974321111222268899999998 56899999999999999999988777776543 1
Q ss_pred ---------cEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecC--cccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182 399 ---------GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG--HEELVRCIRF--DAKRIVSGAYDGKIKVWN 463 (486)
Q Consensus 399 ---------~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~--~~~~l~s~~~dg~v~iwd 463 (486)
.+..+.+ ++++ +|+.||.|++||+.+++.+..+.+ |...+..++| ++++|++++ ||.|++||
T Consensus 303 ~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~ 379 (383)
T 3ei3_B 303 IKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWN 379 (383)
T ss_dssp CCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred eEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEe
Confidence 2222333 3444 677899999999999999999987 4567778899 889999997 99999999
Q ss_pred CCC
Q psy9182 464 LVA 466 (486)
Q Consensus 464 l~~ 466 (486)
+++
T Consensus 380 ~~~ 382 (383)
T 3ei3_B 380 RED 382 (383)
T ss_dssp CC-
T ss_pred cCC
Confidence 974
No 55
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.5e-33 Score=260.94 Aligned_cols=224 Identities=21% Similarity=0.396 Sum_probs=199.3
Q ss_pred eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC----cEEEEecccCc
Q psy9182 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG----EMVNTLIHHCE 315 (486)
Q Consensus 242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~ 315 (486)
+++++|++|+.||.|++||..+++.+..+..|...|.+++| +++++++|+.|+.|++||+.++ .....+.+|..
T Consensus 65 ~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~ 144 (340)
T 1got_B 65 TDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG 144 (340)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCc
Confidence 36677889999999999999999989999999999999998 7899999999999999999875 35667788999
Q ss_pred cEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182 316 AVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT 392 (486)
Q Consensus 316 ~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~ 392 (486)
.+.++.|.+ +.+++++.|+.|++||+.+++.. ..+.+|...|.++.+ +++++++|+.|+.|++||+++++.+..
T Consensus 145 ~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~ 221 (340)
T 1got_B 145 YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT---TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221 (340)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETTTTEEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred cEEEEEECCCCcEEEEECCCcEEEEECCCCcEE---EEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE
Confidence 999999974 58999999999999999887644 566789999999999 788999999999999999999999999
Q ss_pred EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC--cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 393 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG--HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 393 ~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
+.+|...|.++.++ +++|++|+.||.|++||+++++.+..+.. +...|++++| ++++|++|+.||.|++||+.+
T Consensus 222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 99999999999985 78999999999999999999988877753 3357999999 889999999999999999876
Q ss_pred CC
Q psy9182 467 AL 468 (486)
Q Consensus 467 ~~ 468 (486)
..
T Consensus 302 ~~ 303 (340)
T 1got_B 302 AD 303 (340)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 56
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.1e-34 Score=266.08 Aligned_cols=235 Identities=17% Similarity=0.237 Sum_probs=198.4
Q ss_pred ccccccccCCccCcceEEEeecCceeeecccccccceeee----cCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL----NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l----~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
+...|.+++|++++ +|++|+.||+|+|||+.+++.+..+ .+|...|.+++|+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s----------------------- 136 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVL----------------------- 136 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEEC-----------------------
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEEC-----------------------
Confidence 44568899999986 7889999999999999998865543 4788888888774
Q ss_pred CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182 179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV 258 (486)
Q Consensus 179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 258 (486)
+++++|++|+.||.|++
T Consensus 137 ---------------------------------------------------------------pdg~~l~sgs~d~~i~i 153 (344)
T 4gqb_B 137 ---------------------------------------------------------------SSGTQAVSGSKDICIKV 153 (344)
T ss_dssp ---------------------------------------------------------------TTSSEEEEEETTSCEEE
T ss_pred ---------------------------------------------------------------CCCCEEEEEeCCCeEEE
Confidence 46778999999999999
Q ss_pred EECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEec--ccCccEEEEEEcCC---eEEEE
Q psy9182 259 WDRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRFSNG---MMVTC 330 (486)
Q Consensus 259 ~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~i~~~~~~~~---~l~~~ 330 (486)
||+.+++++..+.+|...|.++.| ++ .++++++.||+|++||+++++....+. .+...+.+++|+++ ++++|
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 999999999999999999999999 44 588999999999999999999888774 34567899999753 78899
Q ss_pred eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-
Q psy9182 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR- 406 (486)
Q Consensus 331 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~- 406 (486)
+.||.|++||+++++.+ ..+.+|...|.++.| ++ ++|++|+.|++|++||+++++++ .+.+|...|.+++|+
T Consensus 234 ~~dg~v~~wd~~~~~~~---~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCV---LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSP 309 (344)
T ss_dssp ETTSEEEEEESCC--CC---EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECS
T ss_pred ccCCcEEEEECCCCcEE---EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeC
Confidence 99999999999988755 556789999999999 45 58999999999999999998754 578999999999995
Q ss_pred -C-CEEEEEeCCCcEEEEECCCCe
Q psy9182 407 -D-RLVVSGSSDNTIRLWDIECGA 428 (486)
Q Consensus 407 -~-~~l~~~~~dg~v~iwd~~~~~ 428 (486)
+ .+|++++.||+|++|++.+..
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCeEEEEEcCCCeEEEEECCCCC
Confidence 4 578899999999999998653
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-34 Score=273.02 Aligned_cols=303 Identities=16% Similarity=0.306 Sum_probs=239.3
Q ss_pred CceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcc-eeecCCCCCcceeeec----ccccccccC
Q psy9182 125 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF-QIVSSSHDDTILIWDF----LNYSETPIQ 199 (486)
Q Consensus 125 dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~-~l~s~s~dg~i~vWd~----~~~~~~~~~ 199 (486)
...+.+|++...........|...|.+++|+ +++. +|++++.||.|++||+ .++...
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---------------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--- 85 (425)
T 1r5m_A 24 NSIDSSDDLDGFVKILKEIVKLDNIVSSTWN---------------PLDESILAYGEKNSVARLARIVETDQEGKKY--- 85 (425)
T ss_dssp ----------CCCEECEEEEECSCCSEEEEC---------------SSCTTEEEEEETBTEEEEEEEEEC------C---
T ss_pred ccccccccchhhhhheeeeeccCceEEEEEC---------------CCCCcEEEEecCCceEEEEEEecccCCcccc---
Confidence 3456788887655555555677999999998 5777 8999999999999998 543310
Q ss_pred CCCCCCCCCCCcccccccccCceeEEEEec-c------CCC--ccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEE
Q psy9182 200 GGGGGGPPPSGPSIENNWRMGKFLLQRINC-R------SEN--SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL 270 (486)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~--~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 270 (486)
|... ....+.. . ..+ ....+++++++++|++|+.||.|++|| .+++.+..+
T Consensus 86 -----------------~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~ 145 (425)
T 1r5m_A 86 -----------------WKLT--IIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVL 145 (425)
T ss_dssp -----------------EEEE--EEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEE
T ss_pred -----------------cccc--ccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeec
Confidence 0000 0000000 0 012 334455667899999999999999999 778888999
Q ss_pred cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc---------------EEEEEEcC-CeEEEEeC
Q psy9182 271 TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA---------------VLHLRFSN-GMMVTCSK 332 (486)
Q Consensus 271 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---------------i~~~~~~~-~~l~~~~~ 332 (486)
..|...|.++.| ++++|++++.||.|++||+.+++.+..+..+... +.++.|++ +.+++++.
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (425)
T 1r5m_A 146 NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP 225 (425)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG
T ss_pred cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC
Confidence 999999999999 7889999999999999999999999888777666 78888874 58999999
Q ss_pred CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCC-CE
Q psy9182 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD-RL 409 (486)
Q Consensus 333 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~ 409 (486)
+|.|++||+.+++.. ..+..|...+.++.+ +++++++++.|+.|++||+++++.+..+..|...+.++.+++ .+
T Consensus 226 ~g~i~~~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 302 (425)
T 1r5m_A 226 KGAIFVYQITEKTPT---GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDK 302 (425)
T ss_dssp GGCEEEEETTCSSCS---EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTE
T ss_pred CCeEEEEEcCCCcee---eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCE
Confidence 999999999987654 445678899999998 788999999999999999999999999999999999999952 29
Q ss_pred EEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 410 l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
+++++.||.|++||+++++.+..+..|...|.+++| ++++|++++.||.|++||+.+..
T Consensus 303 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 303 VISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 999999999999999999999999999999999999 78999999999999999998654
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=277.35 Aligned_cols=321 Identities=19% Similarity=0.267 Sum_probs=223.7
Q ss_pred cccccccccccCCcc-CcceEEEeecCceeeecccccccceeeec-------------CcccceeEEEeecceeEecCCC
Q psy9182 100 KPMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSSCEFVRTLN-------------GHKRGIACLQYRDRLVVSGSSD 165 (486)
Q Consensus 100 ~~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~~~~~~~l~-------------~h~~~V~~~~~~~~~~~~~~~d 165 (486)
...|...|.++.++| ++++|++|+.||.|++||+.+++....+. +|...|.+++|++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------- 109 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYP--------- 109 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECT---------
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEcc---------
Confidence 345889999999999 99999999999999999999887666553 6999999999973
Q ss_pred CceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe---
Q psy9182 166 NTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY--- 242 (486)
Q Consensus 166 ~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--- 242 (486)
.++..+++++.||.|++||+.+..... .+. ........++.+
T Consensus 110 -----~~~~~l~s~~~d~~i~iwd~~~~~~~~----------------------------~~~--~~~~~~~~~~~~~~~ 154 (408)
T 4a11_B 110 -----HDTGMFTSSSFDKTLKVWDTNTLQTAD----------------------------VFN--FEETVYSHHMSPVST 154 (408)
T ss_dssp -----TCTTCEEEEETTSEEEEEETTTTEEEE----------------------------EEE--CSSCEEEEEECSSCS
T ss_pred -----CCCcEEEEEeCCCeEEEeeCCCCccce----------------------------ecc--CCCceeeeEeecCCC
Confidence 156689999999999999986533211 111 112223333444
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEECCCCc-EEEEe--------
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDVNTGE-MVNTL-------- 310 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~-~~~~~-------- 310 (486)
++.++++++.+|.|++||+.+++.+..+.+|...|.++++ +++ ++++++.||.|++||++++. .+..+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 4559999999999999999999999999999999999999 455 69999999999999998765 33443
Q ss_pred -------cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEee--ec-CcccEEEEEe-CCCEEEEEeCCC
Q psy9182 311 -------IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVL--VG-HRAAVNVVDF-DEKYIVSASGDR 377 (486)
Q Consensus 311 -------~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~-~~~~v~~~~~-~~~~l~~~~~d~ 377 (486)
..|...|.+++|+++ .+++++.||.|++||+.+++........ .. .......... .+..+++++.++
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT
T ss_pred eeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC
Confidence 467889999999865 8999999999999999987654221110 00 1111112222 456677778899
Q ss_pred cEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-cCCEEEEEe
Q psy9182 378 TIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGA 454 (486)
Q Consensus 378 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~~ 454 (486)
.|++||+.+++.+..+.+|...|.++.++ +++|++|+.||.|++||+++++.+.....+... ..+.. ....+.+.+
T Consensus 315 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 393 (408)
T 4a11_B 315 TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK-SQLNPAFEDAWSSSD 393 (408)
T ss_dssp EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------------------------
T ss_pred EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec-cccccccceeecccC
Confidence 99999999999999999999999999884 789999999999999999999887766544322 22233 445567788
Q ss_pred CCCcEEEEeCC
Q psy9182 455 YDGKIKVWNLV 465 (486)
Q Consensus 455 ~dg~v~iwdl~ 465 (486)
.|+.+++|+..
T Consensus 394 ~~~~~~~W~~~ 404 (408)
T 4a11_B 394 EEGGTSAWSHP 404 (408)
T ss_dssp -----------
T ss_pred ccCceeecCCc
Confidence 89999999865
No 59
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.2e-34 Score=272.17 Aligned_cols=312 Identities=21% Similarity=0.306 Sum_probs=245.6
Q ss_pred ecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceecc-CcceeecCCCCCcceeeecccccccccCCC
Q psy9182 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-DEFQIVSSSHDDTILIWDFLNYSETPIQGG 201 (486)
Q Consensus 123 ~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~-~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~ 201 (486)
..++.+++|++.+++....+.+|.+.|.+++|+ + ++.+|++++.||.|++||+.+.........
T Consensus 20 ~~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s---------------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 84 (408)
T 4a11_B 20 RAESTRRVLGLELNKDRDVERIHGGGINTLDIE---------------PVEGRYMLSGGSDGVIVLYDLENSSRQSYYTC 84 (408)
T ss_dssp HHHHHHHHHTEEECTTEEECCCCSSCEEEEEEC---------------TTTCCEEEEEETTSCEEEEECCCCSSSSCEEE
T ss_pred eccCcceeeccccCcceeeeeccCCcEEEEEEe---------------cCCCCEEEEEcCCCeEEEEECCCCcccceEec
Confidence 456789999999999999999999999999997 5 778899999999999999876443221100
Q ss_pred CCCCCCCCCcccccccccCceeEEEE--eccCCCccceEEEE--e-CCCEEEEEecCCeEEEEECCCceeeEEEcCCccc
Q psy9182 202 GGGGPPPSGPSIENNWRMGKFLLQRI--NCRSENSKGVYCLQ--Y-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS 276 (486)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~--~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (486)
. ..... .....+...+.++. + ++.++++++.||.|++||+.+++....+. +...
T Consensus 85 ~--------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~ 143 (408)
T 4a11_B 85 K--------------------AVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEET 143 (408)
T ss_dssp C--------------------EEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSC
T ss_pred c--------------------ccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCc
Confidence 0 00000 00123445555554 4 56789999999999999999999988887 6677
Q ss_pred EEEEEe-----cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCcee
Q psy9182 277 VLCLQY-----DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEIT 348 (486)
Q Consensus 277 v~~~~~-----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~ 348 (486)
+.++.+ ++.++++++.||.|++||+++++.+..+..|...|.+++|+++ .+++++.||.|++||++......
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~ 223 (408)
T 4a11_B 144 VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCL 223 (408)
T ss_dssp EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCS
T ss_pred eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccc
Confidence 888877 3459999999999999999999999999999999999999865 58899999999999998765221
Q ss_pred eE-------------EeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-----c-EEEEEe-C
Q psy9182 349 LR-------------RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-----G-IACLQY-R 406 (486)
Q Consensus 349 ~~-------------~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~-v~~~~~-~ 406 (486)
.. .....|...|.++.| +++++++++.|+.|++||+.+++....+..+.. . ...... .
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
T 4a11_B 224 ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGC 303 (408)
T ss_dssp EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSS
T ss_pred ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCC
Confidence 11 112568889999999 788999999999999999999877655443221 1 112222 3
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP 470 (486)
Q Consensus 407 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~ 470 (486)
+..+++++.|+.|++||+.+++++..+.+|...|++++| ++++|++++.||.|++||+.+....
T Consensus 304 ~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 304 SSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp SSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred CceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 566777888999999999999999999999999999999 8899999999999999999987543
No 60
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.6e-35 Score=281.10 Aligned_cols=280 Identities=19% Similarity=0.222 Sum_probs=210.2
Q ss_pred cccccccccCCcc-CcceEEEeecCceeeecccccccce--eeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182 102 MLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 102 ~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~~~~~--~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
.|...|+|++|+| ++.+||+|+.||.|+|||+.+++.. ..+.+|.+.|.+++|++ .++.+|+
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p--------------~~~~~l~- 181 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNP--------------LNTNQFY- 181 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECS--------------SCTTEEE-
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeC--------------CCCCEEE-
Confidence 4566799999998 5679999999999999999877654 45568999999999963 1333444
Q ss_pred CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182 179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV 258 (486)
Q Consensus 179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 258 (486)
+|+.||+|++
T Consensus 182 ----------------------------------------------------------------------s~s~D~~v~i 191 (435)
T 4e54_B 182 ----------------------------------------------------------------------ASSMEGTTRL 191 (435)
T ss_dssp ----------------------------------------------------------------------EECSSSCEEE
T ss_pred ----------------------------------------------------------------------EEeCCCEEEE
Confidence 4444555555
Q ss_pred EECCCceeeEEEcC--CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEe
Q psy9182 259 WDRVSLQCIKVLTG--HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCS 331 (486)
Q Consensus 259 ~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~ 331 (486)
||+.++........ +...+.++++ ++++|++|+.||.|++||++ ++.+..+..|...|.+++|+++ ++++|+
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEec
Confidence 55444332222222 2334556666 78999999999999999986 4566778899999999999853 788999
Q ss_pred CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCccc------EEEE
Q psy9182 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG------IACL 403 (486)
Q Consensus 332 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------v~~~ 403 (486)
.|+.|++||+++.+.........+|...|.++.| ++++|++++.|+.|++||+.+++....+..|... +...
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 9999999999887655444455679999999998 7899999999999999999999888877665432 1112
Q ss_pred Ee--CCCEEEEEe------------CCCcEEEEECCCCeeeEEec-CcccCeEEE-Ee--cCCEEEEEeCCCcEEEEeCC
Q psy9182 404 QY--RDRLVVSGS------------SDNTIRLWDIECGACLRVLE-GHEELVRCI-RF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 404 ~~--~~~~l~~~~------------~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~-~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
.+ ++.++++++ .++.|++||..+++.+..+. +|...|.++ +| +|++|++|+ |+.|+|||++
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ 429 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence 22 345555543 34679999999999988874 678888887 57 788898876 8899999998
Q ss_pred CCC
Q psy9182 466 AAL 468 (486)
Q Consensus 466 ~~~ 468 (486)
.++
T Consensus 430 ~gk 432 (435)
T 4e54_B 430 EAR 432 (435)
T ss_dssp ---
T ss_pred cCe
Confidence 763
No 61
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-33 Score=265.55 Aligned_cols=293 Identities=14% Similarity=0.197 Sum_probs=224.0
Q ss_pred ccccccCCccCcceEEEeecCc-------eeeecccccccc----------eeeecCcccceeEEEeecceeEecCCCCc
Q psy9182 105 RDFISLLPNFDEKYIVSASGDR-------TIKVWNTSSCEF----------VRTLNGHKRGIACLQYRDRLVVSGSSDNT 167 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~dg-------~v~iWd~~~~~~----------~~~l~~h~~~V~~~~~~~~~~~~~~~d~~ 167 (486)
.+|.+++|+||+++|++|+.|. .|++|++..+.. ...|.+|...|.+++++++.++++..++.
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~ 94 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNENS 94 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCCH
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCCc
Confidence 4689999999999999987543 599999875432 13467899999999999998888877644
Q ss_pred eeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE
Q psy9182 168 IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI 247 (486)
Q Consensus 168 i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 247 (486)
..|++++.|+.+++|++.....
T Consensus 95 ------~~l~s~~~d~~~r~~~~~~~~~---------------------------------------------------- 116 (365)
T 4h5i_A 95 ------TKITQGKGNKHLRKFKYDKVND---------------------------------------------------- 116 (365)
T ss_dssp ------HHHHHTSCCCCEEEEEEETTTT----------------------------------------------------
T ss_pred ------cEEEEecCCCcEEEEEecCCCc----------------------------------------------------
Confidence 4578888999999998743210
Q ss_pred EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEE--eCCCcEEEEECCCCcEEEEecccCccEEEEEEc
Q psy9182 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG--SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323 (486)
Q Consensus 248 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~ 323 (486)
.+..+..... .....+...+.+++| ||++++++ +.|++|++||+++++++..+. |...|.+++|+
T Consensus 117 -------~~~~~~~~~~---~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fs 185 (365)
T 4h5i_A 117 -------QLEFLTSVDF---DASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFS 185 (365)
T ss_dssp -------EEEEEEEECS---SCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEEC
T ss_pred -------eEEEeeeece---eecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEc
Confidence 0111100000 001123334555555 88887654 468999999999999988875 56789999998
Q ss_pred CC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCC----cEEEEECCCceE----EE
Q psy9182 324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDR----TIKVWNTSSCEF----VR 391 (486)
Q Consensus 324 ~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~----~i~iwd~~~~~~----~~ 391 (486)
|+ ++++++ ++.+.+|+..+++... ......|...+.++.| +++++++++.|+ .+++||+..... ..
T Consensus 186 pdg~~l~s~s-~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~ 263 (365)
T 4h5i_A 186 TDGKVVAYIT-GSSLEVISTVTGSCIA-RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSK 263 (365)
T ss_dssp TTSSEEEEEC-SSCEEEEETTTCCEEE-EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEE
T ss_pred cCCceEEecc-ceeEEEEEeccCccee-eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeee
Confidence 75 666665 6667788877766432 2345578888999888 889999998877 688899876543 45
Q ss_pred EEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 392 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 392 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
.+.+|...|++++| ++++||+|+.|++|+|||+++++++..+ .+|...|++|+| ||++|++||.|++|+|||+..
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 67789999999988 4899999999999999999999999875 789999999999 899999999999999999975
Q ss_pred CC
Q psy9182 467 AL 468 (486)
Q Consensus 467 ~~ 468 (486)
..
T Consensus 344 ~~ 345 (365)
T 4h5i_A 344 NY 345 (365)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-35 Score=287.19 Aligned_cols=328 Identities=10% Similarity=0.108 Sum_probs=224.3
Q ss_pred cccccccCCccCc---------ceEEE-------------------eecCceeeecccccccce----eeecCcccceeE
Q psy9182 104 QRDFISLLPNFDE---------KYIVS-------------------ASGDRTIKVWNTSSCEFV----RTLNGHKRGIAC 151 (486)
Q Consensus 104 ~~~~~~~~~s~~~---------~~l~t-------------------g~~dg~v~iWd~~~~~~~----~~l~~h~~~V~~ 151 (486)
...|.++.++|++ ++||+ ++.||+|+|||+.+++.. .++.+|.+.|.+
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~ 212 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWD 212 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEE
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEE
Confidence 4567788888876 56666 557899999999887753 456788889999
Q ss_pred EEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccC
Q psy9182 152 LQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS 231 (486)
Q Consensus 152 ~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (486)
++|++.. .. -+++.+|++++.||+|++||+.......... ..... .... ..
T Consensus 213 v~wsp~~----~~-----~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~----------------~~~~~-p~~~---l~ 263 (524)
T 2j04_B 213 LKWHEGC----HA-----PHLVGCLSFVSQEGTINFLEIIDNATDVHVF----------------KMCEK-PSLT---LS 263 (524)
T ss_dssp EEECSSC----CC-----SSSSCEEEEEETTSCEEEEECCCCSSSSSEE----------------ECCCS-CSEE---EC
T ss_pred EEECCCC----CC-----CCCCceEEEEecCCeEEEEEcCCCccccccc----------------eeecC-ceEE---EE
Confidence 9998531 00 0235689999999999999986543110000 00000 0001 12
Q ss_pred CCccceEEEEe-CCCEEEEEecCCeEEEEECCCc-eeeEEEcCCcccEEEE--Ee--cC-CEEEEEeCCCcEEEEECCCC
Q psy9182 232 ENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVSL-QCIKVLTGHTGSVLCL--QY--DE-RVIISGSSDSTVRVWDVNTG 304 (486)
Q Consensus 232 ~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~--~~--~~-~~l~~~~~dg~i~vwd~~~~ 304 (486)
.+...+.++.+ .+..|++|+.||+|++||+.++ .+...+.+|...|.++ .+ ++ .+|++|+.||+|++||++++
T Consensus 264 ~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~ 343 (524)
T 2j04_B 264 LADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI 343 (524)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH
T ss_pred cCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC
Confidence 34556667665 3468999999999999999876 4456788999999999 44 45 79999999999999999988
Q ss_pred cEEEEecccCc--cEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCc
Q psy9182 305 EMVNTLIHHCE--AVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT 378 (486)
Q Consensus 305 ~~~~~~~~~~~--~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~ 378 (486)
++...+.+|.. .+.+++|+|+ .+++++.|+.|++||++++... ..+.+|...|.+++| ++++|++|+.|++
T Consensus 344 ~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~---~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 344 ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV---HPLVSRETTITAIGVSRLHPMVLAGSADGS 420 (524)
T ss_dssp HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC---EEEEECSSCEEEEECCSSCCBCEEEETTTE
T ss_pred CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc---eeeecCCCceEEEEeCCCCCeEEEEECCCE
Confidence 77666655543 4788999874 7889999999999999987654 345579999999999 7889999999999
Q ss_pred EEEEECCCceEEEEEcC-----CcccEEEEEeC--CCEEEEEeCCCcEEEEECC-CCeeeEEecCcccCeEEEEe--c--
Q psy9182 379 IKVWNTSSCEFVRTLNG-----HKRGIACLQYR--DRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRF--D-- 446 (486)
Q Consensus 379 i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~h~~~v~~~~~--~-- 446 (486)
|++||+... .+..++. +...+..++++ ++.+ .... .+.+|+.. ++.++..+.+|...|.+|+| +
T Consensus 421 v~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~-~~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~ 496 (524)
T 2j04_B 421 LIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKY-RIDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA 496 (524)
T ss_dssp EECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEE-EECC--CCCCCC-------------CCCSCCCEEECCSTT
T ss_pred EEEEechHh-hccccccCccceeeeEEEEeccCCCCCeE-EccC--CceecccccCCcceeeecCCCceEEEEECCCCCC
Confidence 999998653 2222111 11134566554 4533 2222 23344332 47788889999999999999 3
Q ss_pred -CCEEEEEeCCCcEEEEeCCCC
Q psy9182 447 -AKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 447 -~~~l~s~~~dg~v~iwdl~~~ 467 (486)
+..+++|+.||.|+||+++..
T Consensus 497 ~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 497 GGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp TTTEEEEECTTSEEEEEECSCC
T ss_pred ccHHHHhhccCceEEEEEcccc
Confidence 338999999999999999754
No 63
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.3e-34 Score=269.05 Aligned_cols=280 Identities=13% Similarity=0.223 Sum_probs=228.5
Q ss_pred ccccccccccCCccCcceE-EEeec---Cceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182 101 PMLQRDFISLLPNFDEKYI-VSASG---DRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ 175 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l-~tg~~---dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~ 175 (486)
..|...|.++.++|++..+ ++|+. ||.|+|||+.+++..... .+|...|.+++|++.
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~------------------ 76 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGAT------------------ 76 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTC------------------
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCC------------------
Confidence 4578899999999999655 55665 999999999998866543 378888999888531
Q ss_pred eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182 176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255 (486)
Q Consensus 176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~ 255 (486)
.+++.++++|+.||.
T Consensus 77 -----------------------------------------------------------------~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 77 -----------------------------------------------------------------SLQQRYLATGDFGGN 91 (357)
T ss_dssp -----------------------------------------------------------------CTTTCCEEEEETTSC
T ss_pred -----------------------------------------------------------------CCCCceEEEecCCCe
Confidence 012566788888888
Q ss_pred EEEEECCCce-eeEEEcCCcccEEEEEe--------cCCEEEEEeCCCcEEEEECCCCc-EEEEecccCc----cEEEEE
Q psy9182 256 IKVWDRVSLQ-CIKVLTGHTGSVLCLQY--------DERVIISGSSDSTVRVWDVNTGE-MVNTLIHHCE----AVLHLR 321 (486)
Q Consensus 256 i~i~d~~~~~-~~~~~~~~~~~v~~~~~--------~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~----~i~~~~ 321 (486)
|++||+.+++ .+..+.+|...|.++.+ ++++|++++.||.|++||+++++ .+..+..+.. .+.++.
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 8888888877 78888899999999853 57899999999999999999887 6777755444 788888
Q ss_pred E----c--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-----CCCEEEEEeCCCcEEEEECCCceEE
Q psy9182 322 F----S--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSSCEFV 390 (486)
Q Consensus 322 ~----~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~ 390 (486)
+ + +..+++++.||.|++||+++++.. ....|...+.++.| +++++++++.||.|++||+++++..
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALR----WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPT 247 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEE----EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETT
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCcee----eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc
Confidence 4 3 458999999999999999987643 23567888999998 4689999999999999999887765
Q ss_pred EEEc-----CCcccEEEEEeC--CC-EEEEEeCCCcEEEEECCCC-------------------eeeEEecCcccCeEEE
Q psy9182 391 RTLN-----GHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECG-------------------ACLRVLEGHEELVRCI 443 (486)
Q Consensus 391 ~~~~-----~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~~-------------------~~~~~~~~h~~~v~~~ 443 (486)
..+. +|...|.++.++ +. ++++++.||.|++||++++ +.+..+.+|...|+++
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~ 327 (357)
T 3i2n_A 248 KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSL 327 (357)
T ss_dssp TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEE
T ss_pred cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEE
Confidence 5554 899999999995 44 8999999999999999754 4677889999999999
Q ss_pred Ee--cCCEEE-EEeCCCcEEEEeCCCC
Q psy9182 444 RF--DAKRIV-SGAYDGKIKVWNLVAA 467 (486)
Q Consensus 444 ~~--~~~~l~-s~~~dg~v~iwdl~~~ 467 (486)
+| ++++|+ +++.||.|++||+...
T Consensus 328 ~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 328 DWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 99 778888 8999999999999753
No 64
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.8e-33 Score=294.25 Aligned_cols=317 Identities=20% Similarity=0.322 Sum_probs=259.6
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
..|...+.+++++|++++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+ +++..|++++
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s---------------~~~~~l~~~~ 74 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFI---------------ARKNWIIVGS 74 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE---------------GGGTEEEEEE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEe---------------CCCCEEEEEe
Confidence 3567789999999999999999999999999999999999999999999999998 6788899999
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
.||.|++||+.++.. ...+.. +......++++++++++++++.||.|++||
T Consensus 75 ~dg~i~vw~~~~~~~----------------------------~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 75 DDFRIRVFNYNTGEK----------------------------VVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp TTSEEEEEETTTCCE----------------------------EEEEEC-CSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred CCCeEEEEECCCCcE----------------------------EEEEec-CCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 999999999865332 111211 122334456677899999999999999999
Q ss_pred CCCc-eeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccC-ccEEEEEEcC----CeEEEEe
Q psy9182 261 RVSL-QCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC-EAVLHLRFSN----GMMVTCS 331 (486)
Q Consensus 261 ~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i~~~~~~~----~~l~~~~ 331 (486)
+.++ .....+.+|...|.+++| +++.+++++.||.|++||+.+++....+..+. ..+.++.|++ ..+++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9887 777888999999999998 45799999999999999999888777765544 7888999965 3899999
Q ss_pred CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--C
Q psy9182 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--D 407 (486)
Q Consensus 332 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~ 407 (486)
.||.|++||+.+++.. ..+.+|...|.++.| +++++++++.||.|++||+.+++.+..+..|...+.+++++ +
T Consensus 206 ~dg~i~~~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCV---ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG 282 (814)
T ss_dssp TTSEEEEEETTTTEEE---EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTC
T ss_pred CCCEEEEEECCCCcEE---EEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCC
Confidence 9999999999887643 556678899999998 78899999999999999999999999999999999999985 3
Q ss_pred C--EEEEEeCCCcEEEEECCCCeeeEE-------------------------------------------ecCcccCeEE
Q psy9182 408 R--LVVSGSSDNTIRLWDIECGACLRV-------------------------------------------LEGHEELVRC 442 (486)
Q Consensus 408 ~--~l~~~~~dg~v~iwd~~~~~~~~~-------------------------------------------~~~h~~~v~~ 442 (486)
. +++++ .++.+.+|++..+..... +..+...+.+
T Consensus 283 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (814)
T 3mkq_A 283 RKNYIASG-FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQS 361 (814)
T ss_dssp GGGEEEEE-ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSE
T ss_pred CceEEEEE-eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCce
Confidence 3 35554 467788888764322211 1223445778
Q ss_pred EEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 443 IRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 443 ~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
++| +|++|++++ ||.+.+|++..
T Consensus 362 ~~~spdg~~la~~~-~~~~~i~~~~~ 386 (814)
T 3mkq_A 362 LAHSPNGRFVTVVG-DGEYVIYTALA 386 (814)
T ss_dssp EEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred eEECCCCCEEEEec-CCEEEEEECcc
Confidence 888 788888887 88999999764
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.1e-32 Score=255.28 Aligned_cols=274 Identities=18% Similarity=0.322 Sum_probs=228.8
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccce---eeec--CcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV---RTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~---~~l~--~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l 176 (486)
.|...+.++.++|++++|++++ ||.|++||+.+++.. ..+. +|...|.+++|+ +++.++
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~~~l 112 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL---------------PDGCTL 112 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEEC---------------TTSSEE
T ss_pred cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEc---------------CCCCEE
Confidence 4677899999999999999999 999999999887643 3333 799999999997 577889
Q ss_pred ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182 177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI 256 (486)
Q Consensus 177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 256 (486)
++++.|+.|++||+.+.... ....+. ........++++++++++++++.||.|
T Consensus 113 ~~~~~d~~i~~~d~~~~~~~--------------------------~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 113 IVGGEASTLSIWDLAAPTPR--------------------------IKAELT-SSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp EEEESSSEEEEEECCCC--E--------------------------EEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEcCCCcEEEEECCCCCcc--------------------------eeeecc-cCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 99999999999998543210 111111 112223345566789999999999999
Q ss_pred EEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182 257 KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK 332 (486)
Q Consensus 257 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~ 332 (486)
++||+.+++.+..+..|...+.++.+ +++++++++.||.|++||+++++.+..+. +...+.+++|+++ .+++++.
T Consensus 166 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcC
Confidence 99999999999999999999999999 78899999999999999999998887764 5778999999864 8999999
Q ss_pred CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CC
Q psy9182 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR 408 (486)
Q Consensus 333 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~ 408 (486)
++.|++||+.+++. .....|...+.++.| +++++++++.||.|++||+.+++.+... .|...+.++.++ ++
T Consensus 245 ~~~i~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~ 319 (337)
T 1gxr_A 245 SSNVEVLHVNKPDK----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDK 319 (337)
T ss_dssp TSCEEEEETTSSCE----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSC
T ss_pred CCcEEEEECCCCCe----EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCC
Confidence 99999999988764 245678899999999 6899999999999999999999887544 478889998884 78
Q ss_pred EEEEEeCCCcEEEEEC
Q psy9182 409 LVVSGSSDNTIRLWDI 424 (486)
Q Consensus 409 ~l~~~~~dg~v~iwd~ 424 (486)
+|++++.||.|++|++
T Consensus 320 ~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 320 YIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEEETTSCEEEEEE
T ss_pred EEEEecCCCeEEEEEE
Confidence 9999999999999996
No 66
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-32 Score=255.55 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=208.2
Q ss_pred EEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeE---EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEE
Q psy9182 226 RINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK---VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300 (486)
Q Consensus 226 ~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd 300 (486)
.+..+.......++++|++++|++|+.|+.|++||+.++.... ...+|...|.+++| ++++|++|+.|+.+++||
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 3333333345567788899999999999999999998876432 23689999999999 789999999999999999
Q ss_pred CCCC--cEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe
Q psy9182 301 VNTG--EMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS 374 (486)
Q Consensus 301 ~~~~--~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 374 (486)
+.++ +.+..+.+|...|.+++|+++ +|++|+.|+.|++||++.+........+.+|...|.++.| ++++|++++
T Consensus 90 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 90 KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp ECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred ccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence 9876 457788999999999999864 9999999999999999887766666778889999999998 788999999
Q ss_pred CCCcEEEEECCCce--EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC---------------CeeeEEecC
Q psy9182 375 GDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC---------------GACLRVLEG 435 (486)
Q Consensus 375 ~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~---------------~~~~~~~~~ 435 (486)
.|+.|++||.++++ +...+.+|...|.+++|+ +++|++|+.|++|++||... .+++..+.+
T Consensus 170 ~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T 3fm0_A 170 YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSG 249 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECS
T ss_pred CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecC
Confidence 99999999998875 457889999999999995 78999999999999999632 134455555
Q ss_pred -cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy9182 436 -HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRA 472 (486)
Q Consensus 436 -h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~~ 472 (486)
|...|.+++| ++..|++++.|+.|++|++.....+..
T Consensus 250 ~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~ 289 (345)
T 3fm0_A 250 FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQ 289 (345)
T ss_dssp SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTS
T ss_pred CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcce
Confidence 8889999999 788999999999999999987654433
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.4e-32 Score=251.31 Aligned_cols=227 Identities=30% Similarity=0.574 Sum_probs=200.3
Q ss_pred EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc
Q psy9182 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA 316 (486)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 316 (486)
+++++++++++|+.||.|++|+..+++....+.+|...|.+++| ++++|++++.||.|++||+++++.+..+..|...
T Consensus 30 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 109 (312)
T 4ery_A 30 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 109 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 34567889999999999999999999999999999999999999 7899999999999999999999999999999999
Q ss_pred EEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182 317 VLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT 392 (486)
Q Consensus 317 i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~ 392 (486)
|.++.|+++ .+++|+.|+.|++||+++++.. ..+..|...+.++.+ +++++++++.|+.|++||+++++.+..
T Consensus 110 v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE---EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence 999999864 8999999999999999987654 556678899999998 788999999999999999999988877
Q ss_pred Ec-CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEE--Ee---cCCEEEEEeCCCcEEEEeC
Q psy9182 393 LN-GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI--RF---DAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 393 ~~-~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~--~~---~~~~l~s~~~dg~v~iwdl 464 (486)
+. .+...+.++.++ +++|++++.||.|++||+++++.+..+.+|...+..+ .+ ++.+|++|+.||.|++||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 187 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 65 455678888874 8899999999999999999999999999887654322 22 6889999999999999999
Q ss_pred CCCC
Q psy9182 465 VAAL 468 (486)
Q Consensus 465 ~~~~ 468 (486)
.++.
T Consensus 267 ~~~~ 270 (312)
T 4ery_A 267 QTKE 270 (312)
T ss_dssp TTCC
T ss_pred CCch
Confidence 8654
No 68
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.9e-33 Score=259.76 Aligned_cols=275 Identities=12% Similarity=0.101 Sum_probs=232.2
Q ss_pred ccccccccccCCccCcceEEEeecCceeeeccccccc---ceeeecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~---~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~ 177 (486)
..|...|.++.++|++++|++|+.||.|+|||+.+++ ....+.+|...|.+++|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~---------------------- 65 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI---------------------- 65 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEE----------------------
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEEC----------------------
Confidence 4677889999999999999999999999999998876 344555777777777663
Q ss_pred cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCC-EEEEEecCCeE
Q psy9182 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH-KIVSGLRDNTI 256 (486)
Q Consensus 178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i 256 (486)
++++ ++++|+.||.|
T Consensus 66 ----------------------------------------------------------------~~~~~~l~~~~~dg~i 81 (342)
T 1yfq_A 66 ----------------------------------------------------------------DNTDLQIYVGTVQGEI 81 (342)
T ss_dssp ----------------------------------------------------------------ESSSEEEEEEETTSCE
T ss_pred ----------------------------------------------------------------CCCCcEEEEEcCCCeE
Confidence 4566 77788888888
Q ss_pred EEEEC-CCceeeEEEcC--CcccEEEEEec-CCEEEEEeCCCcEEEEECCC---------CcEEEEecccCccEEEEEEc
Q psy9182 257 KVWDR-VSLQCIKVLTG--HTGSVLCLQYD-ERVIISGSSDSTVRVWDVNT---------GEMVNTLIHHCEAVLHLRFS 323 (486)
Q Consensus 257 ~i~d~-~~~~~~~~~~~--~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~~~~~i~~~~~~ 323 (486)
++||+ .+++. ..+.+ |...|.++.|. ++.+++++.||.|++||+++ ++++..+. +...+.+++++
T Consensus 82 ~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 159 (342)
T 1yfq_A 82 LKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN 159 (342)
T ss_dssp EEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred EEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence 88887 66644 66777 99999999985 79999999999999999987 66665555 78899999999
Q ss_pred CCeEEEEeCCCcEEEEECCC-CCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCc------eEEEEE
Q psy9182 324 NGMMVTCSKDRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSC------EFVRTL 393 (486)
Q Consensus 324 ~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~------~~~~~~ 393 (486)
++.+++++.|+.|++||+++ .... .......+...+.++.+ +++++++++.||.|++||++.. +....+
T Consensus 160 ~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 160 SSRLIVGMNNSQVQWFRLPLCEDDN-GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp SSEEEEEESTTEEEEEESSCCTTCC-CEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred CCcEEEEeCCCeEEEEECCcccccc-ceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 99999999999999999988 5432 22344567788998888 4689999999999999999887 778888
Q ss_pred cCCcc---------cEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCc-ccCeEEEEecCCEEEEEeCCCc-EE
Q psy9182 394 NGHKR---------GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRCIRFDAKRIVSGAYDGK-IK 460 (486)
Q Consensus 394 ~~~~~---------~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~l~s~~~dg~-v~ 460 (486)
..|.. .|.++.++ +++|++++.||.|++||+.+++.+..+.+| ...|.+++.++++|++++.||. .+
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~Dg~~~~ 318 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKT 318 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHH
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEecCCCCeEEEEecCCcccc
Confidence 88865 89999984 789999999999999999999999999998 9999999999999999999998 65
Q ss_pred EEeC
Q psy9182 461 VWNL 464 (486)
Q Consensus 461 iwdl 464 (486)
.|..
T Consensus 319 ~~~~ 322 (342)
T 1yfq_A 319 NAAI 322 (342)
T ss_dssp CSSS
T ss_pred cccc
Confidence 5554
No 69
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.6e-32 Score=254.60 Aligned_cols=223 Identities=24% Similarity=0.401 Sum_probs=195.0
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC------cEEEEecccC
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG------EMVNTLIHHC 314 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~ 314 (486)
++++|++|+.||+|++||..+++....+..|...|.+++| ++..+++|+.|+.+++|++... .....+..|.
T Consensus 75 d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~ 154 (354)
T 2pbi_B 75 DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHT 154 (354)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccC
Confidence 5667888888888888888888888888888888988888 7899999999999999998643 3455667899
Q ss_pred ccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCce
Q psy9182 315 EAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCE 388 (486)
Q Consensus 315 ~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~iwd~~~~~ 388 (486)
..|.++.|+++ .+++++.|+.|++||+++++.. ..+.+|...|.++.+ +++++++|+.|+.|++||+++++
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLL---QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE---EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE---EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999864 8999999999999999988654 566789999998887 46899999999999999999999
Q ss_pred EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCc--ccCeEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182 389 FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH--EELVRCIRF--DAKRIVSGAYDGKIKVW 462 (486)
Q Consensus 389 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h--~~~v~~~~~--~~~~l~s~~~dg~v~iw 462 (486)
++..+.+|...|.++.++ +++|++|+.|++|++||+++++.+..+..+ ...+.+++| ++.+|++|+.||.|++|
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVW 311 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence 999999999999999984 789999999999999999999888777644 347889999 89999999999999999
Q ss_pred eCCCCC
Q psy9182 463 NLVAAL 468 (486)
Q Consensus 463 dl~~~~ 468 (486)
|+.++.
T Consensus 312 d~~~~~ 317 (354)
T 2pbi_B 312 DVLKGS 317 (354)
T ss_dssp ETTTCS
T ss_pred ECCCCc
Confidence 997653
No 70
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.5e-32 Score=250.10 Aligned_cols=226 Identities=20% Similarity=0.380 Sum_probs=189.5
Q ss_pred EEeCCCEEEEEecCCeEEEEECCC--ceeeEEEcCCcccEEEEEec----CCEEEEEeCCCcEEEEECCCCc--EEEEec
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVS--LQCIKVLTGHTGSVLCLQYD----ERVIISGSSDSTVRVWDVNTGE--MVNTLI 311 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~vwd~~~~~--~~~~~~ 311 (486)
+++++++|++|+.|++|++||+.. .+.+..+.+|.+.|.+++|. +++|++|+.||+|++||+++++ .+..+.
T Consensus 17 ~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~ 96 (297)
T 2pm7_B 17 MDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA 96 (297)
T ss_dssp ECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC
T ss_pred ECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee
Confidence 345777888888888888888764 46778899999999999982 7899999999999999998874 556778
Q ss_pred ccCccEEEEEEcC----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC---------------CCEEEE
Q psy9182 312 HHCEAVLHLRFSN----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---------------EKYIVS 372 (486)
Q Consensus 312 ~~~~~i~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~l~~ 372 (486)
.|...|.+++|++ ..+++++.|+.|++||++.+.... ...+.+|...|.++.|. +++|++
T Consensus 97 ~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s 175 (297)
T 2pm7_B 97 VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 175 (297)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC------------CCEEEE
T ss_pred cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCcccccccCCCCCCcceEEE
Confidence 8999999999986 389999999999999998764321 24566899999999983 368999
Q ss_pred EeCCCcEEEEECCCce----EEEEEcCCcccEEEEEeCC-----CEEEEEeCCCcEEEEECCCCe---eeEEe--cCccc
Q psy9182 373 ASGDRTIKVWNTSSCE----FVRTLNGHKRGIACLQYRD-----RLVVSGSSDNTIRLWDIECGA---CLRVL--EGHEE 438 (486)
Q Consensus 373 ~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~v~iwd~~~~~---~~~~~--~~h~~ 438 (486)
|+.|+.|++||+++++ ....+.+|...|.+++|++ .+|++++.|++|++||++++. ....+ ..|..
T Consensus 176 gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~ 255 (297)
T 2pm7_B 176 GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD 255 (297)
T ss_dssp EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSS
T ss_pred EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCC
Confidence 9999999999998765 6678899999999999963 689999999999999998643 22233 56788
Q ss_pred CeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 439 LVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 439 ~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
.|.+++| ++++|++++.||.|++|+...
T Consensus 256 ~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 256 VLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9999999 889999999999999999864
No 71
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=271.03 Aligned_cols=287 Identities=20% Similarity=0.408 Sum_probs=229.5
Q ss_pred ceeEEEeecc---eeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeE
Q psy9182 148 GIACLQYRDR---LVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLL 224 (486)
Q Consensus 148 ~V~~~~~~~~---~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (486)
.|.+++|++. ++++++.++ ..+++.+.|+.|++||+.+..........
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g-------~~~~~~~~d~~v~iw~~~~~~~~~~~~~~---------------------- 64 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSG-------TVDANFSTDSSLELWSLLAADSEKPIASL---------------------- 64 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSS-------CCCSSCCCCCCCEEEESSSGGGCSCSCCC----------------------
T ss_pred hcceEeeCCCCCCEEEEEecCc-------ccccccCCCCeEEEEEccCCCCCcEEEEE----------------------
Confidence 6788888742 444443332 23555599999999998765422110000
Q ss_pred EEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCC----ceeeEEEcCCcccEEEEEe--c-CCEEEEEeCCCcEE
Q psy9182 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS----LQCIKVLTGHTGSVLCLQY--D-ERVIISGSSDSTVR 297 (486)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~ 297 (486)
........+++++++++|++|+.||.|++||+.+ .+.+..+.+|...|.+++| + +++|++++.||.|+
T Consensus 65 -----~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 65 -----QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp -----CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred -----ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence 0112334455667899999999999999999987 4578888999999999999 4 78999999999999
Q ss_pred EEECCCCc------EEE---EecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecC------ccc
Q psy9182 298 VWDVNTGE------MVN---TLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGH------RAA 359 (486)
Q Consensus 298 vwd~~~~~------~~~---~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~ 359 (486)
+||+.+++ ... ....|...|.+++|+++ .+++++.||.|++||+++++... .+..+ ...
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~~~ 216 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI---HLSYTSPNSGIKQQ 216 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE---EECCCCCSSCCCCC
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce---EEeccccccccCCc
Confidence 99999876 332 23568889999999854 89999999999999999876543 33333 788
Q ss_pred EEEEEe--CC-CEEEEEeCCC---cEEEEECCCc-eEEEEEc-CCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCCe
Q psy9182 360 VNVVDF--DE-KYIVSASGDR---TIKVWNTSSC-EFVRTLN-GHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGA 428 (486)
Q Consensus 360 v~~~~~--~~-~~l~~~~~d~---~i~iwd~~~~-~~~~~~~-~~~~~v~~~~~---~~~~l~~~~~dg~v~iwd~~~~~ 428 (486)
+.++.| ++ .++++++.|+ .|++||++++ +++..+. +|...|.++.| ++++|++++.||.|++||+++++
T Consensus 217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC
T ss_pred eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc
Confidence 999999 43 6899999998 9999999986 6777888 89999999998 47899999999999999999999
Q ss_pred eeEEecCcccCeEEEEe--cC-CEEEEEeCCCcEEEEeCCCCCCCC
Q psy9182 429 CLRVLEGHEELVRCIRF--DA-KRIVSGAYDGKIKVWNLVAALDPR 471 (486)
Q Consensus 429 ~~~~~~~h~~~v~~~~~--~~-~~l~s~~~dg~v~iwdl~~~~~~~ 471 (486)
++..+.+|...|.+++| ++ .+|++++.||.|++||+.....+.
T Consensus 297 ~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 297 QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 99999999999999999 55 799999999999999998876443
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-32 Score=259.95 Aligned_cols=235 Identities=30% Similarity=0.528 Sum_probs=198.6
Q ss_pred cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI 185 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i 185 (486)
.+.++.|+|++++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~------------------------------ 174 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF------------------------------ 174 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC------------------------------
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEc------------------------------
Confidence 47899999999999999999999999999999999999999999998885
Q ss_pred eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce
Q psy9182 186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ 265 (486)
Q Consensus 186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 265 (486)
+++++|++++.|+.|++||+.+++
T Consensus 175 --------------------------------------------------------p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 175 --------------------------------------------------------PSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp --------------------------------------------------------TTSSEEEEEETTSEEEEEETTTTE
T ss_pred --------------------------------------------------------CCCCEEEEecCCCcEEEEECCCCe
Confidence 245567777778888888887777
Q ss_pred eeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEe-------cccCccEEEEEEcCC--eEEEEeCC
Q psy9182 266 CIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTL-------IHHCEAVLHLRFSNG--MMVTCSKD 333 (486)
Q Consensus 266 ~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~~~~~~i~~~~~~~~--~l~~~~~d 333 (486)
+...+. +...+.++++ +++++++|+.||.|++||+++++.+..+ .+|...|.+++|+++ .+++|+.|
T Consensus 199 ~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 199 CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 776665 4456777777 6789999999999999999999887776 568889999999864 89999999
Q ss_pred CcEEEEECCCCCce---------eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182 334 RSIAVWDMVSPNEI---------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402 (486)
Q Consensus 334 g~i~i~d~~~~~~~---------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 402 (486)
+.|++||+++.... .....+.+|...|.++.+ ++.+|++++.|+.|++||..+++.+..+.+|...|.+
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~ 357 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVIS 357 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEE
Confidence 99999999764321 223456689999999998 7899999999999999999999999999999999999
Q ss_pred EEeC--------CCEEEEEeCCCcEEEEECCCC
Q psy9182 403 LQYR--------DRLVVSGSSDNTIRLWDIECG 427 (486)
Q Consensus 403 ~~~~--------~~~l~~~~~dg~v~iwd~~~~ 427 (486)
+.+. +++|++|+.||.|++|+++..
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9874 578999999999999998643
No 73
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.4e-32 Score=255.66 Aligned_cols=295 Identities=15% Similarity=0.241 Sum_probs=234.0
Q ss_pred eeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccC---cceeecCCCCCcceeeecccccccccCCCCCC
Q psy9182 128 IKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD---EFQIVSSSHDDTILIWDFLNYSETPIQGGGGG 204 (486)
Q Consensus 128 v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~---~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~ 204 (486)
+..|+....+.+..+.+|.+.|.+++|++ + +.+|++++.||.|++||+.+..
T Consensus 21 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---------------~~~~g~~l~~~~~dg~i~iw~~~~~~---------- 75 (368)
T 3mmy_A 21 ATTDNHNPMKDIEVTSSPDDSIGCLSFSP---------------PTLPGNFLIAGSWANDVRCWEVQDSG---------- 75 (368)
T ss_dssp --CCSSCTTCCEECSSCCSSCEEEEEECC---------------TTSSSEEEEEEETTSEEEEEEECTTS----------
T ss_pred eccCCCCCcceeEeccCCCCceEEEEEcC---------------CCCCceEEEEECCCCcEEEEEcCCCC----------
Confidence 34456667778888999999999999983 4 5889999999999999985411
Q ss_pred CCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--
Q psy9182 205 GPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-- 282 (486)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-- 282 (486)
......+.. +......+++++++++|++++.||.|++||+.+++.+. +..|...|.++.|
T Consensus 76 ----------------~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 76 ----------------QTIPKAQQM-HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIK 137 (368)
T ss_dssp ----------------CEEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEE
T ss_pred ----------------ceeEEEecc-ccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEe
Confidence 111111221 22334445566789999999999999999999998776 4569999999988
Q ss_pred --cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeE-EeeecCccc
Q psy9182 283 --DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLR-RVLVGHRAA 359 (486)
Q Consensus 283 --~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~ 359 (486)
+++++++++.||.|++||+++++.+..+..+ ..+.++.+.++.+++++.++.+.+||++........ .....+...
T Consensus 138 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 216 (368)
T 3mmy_A 138 APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHR 216 (368)
T ss_dssp CSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEE
T ss_pred CCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCc
Confidence 5678999999999999999999988888765 468888888899999999999999999876543211 111223344
Q ss_pred EEEEEeCCCE----EEEEeCCCcEEEEECCCc---eEEEEEcCCcc------------cEEEEEeC--CCEEEEEeCCCc
Q psy9182 360 VNVVDFDEKY----IVSASGDRTIKVWNTSSC---EFVRTLNGHKR------------GIACLQYR--DRLVVSGSSDNT 418 (486)
Q Consensus 360 v~~~~~~~~~----l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~------------~v~~~~~~--~~~l~~~~~dg~ 418 (486)
+.++.++... +++++.|+.|++||++.. +.+..+..|.. .|.++.++ +++|++|+.||.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~ 296 (368)
T 3mmy_A 217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR 296 (368)
T ss_dssp EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence 4444444443 999999999999999987 56778888876 69999985 789999999999
Q ss_pred EEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 419 v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
|++||+++++++..+.+|...|++++| ++.+|++++.|+..+.|++-.
T Consensus 297 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 297 FSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp EEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred EEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 999999999999999999999999999 889999999998776666543
No 74
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.6e-31 Score=244.22 Aligned_cols=197 Identities=26% Similarity=0.455 Sum_probs=174.7
Q ss_pred eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEE
Q psy9182 265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWD 340 (486)
Q Consensus 265 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d 340 (486)
.++..+.+|...|.++++ +++++++|+.|++|++||+++++.+..+.+|...|.+++|+++ .+++|+.|+.|++||
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 456778899999999988 7899999999999999999999999999999999999999864 899999999999999
Q ss_pred CCCCCceeeEEeeecCcccEEEEEeC--------CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEE
Q psy9182 341 MVSPNEITLRRVLVGHRAAVNVVDFD--------EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV 410 (486)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l 410 (486)
++.. ....+.+|...+.++.+. +..+++++.|+.|++||+++++....+.+|...|.++.++ +++|
T Consensus 136 ~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 136 IKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLI 211 (319)
T ss_dssp TTSC----EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEE
T ss_pred CCCC----eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEE
Confidence 9643 235567899999999882 3489999999999999999999999999999999999985 8899
Q ss_pred EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
++|+.||.|++||+.+++.+..+..+ ..|.+++| ++.+|++++. +.+++|+++..
T Consensus 212 ~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~ 268 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQ 268 (319)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEET-TEEEEEEETTE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcC
Confidence 99999999999999999999998865 67999999 7788888775 45999998754
No 75
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.6e-32 Score=255.52 Aligned_cols=236 Identities=15% Similarity=0.261 Sum_probs=191.3
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceee----ecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRT----LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~----l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~ 177 (486)
.|...|.+++|+|++. +++++.||+|+|||+.+++.... ..+|...|.+++|+
T Consensus 92 ~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~s---------------------- 148 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVF---------------------- 148 (357)
T ss_dssp ECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEEC----------------------
T ss_pred CCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEEC----------------------
Confidence 4566799999999986 55678899999999998875432 34677777777763
Q ss_pred cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK 257 (486)
Q Consensus 178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 257 (486)
+++++|++|+.||.|+
T Consensus 149 ----------------------------------------------------------------pdg~~l~sgs~dg~v~ 164 (357)
T 4g56_B 149 ----------------------------------------------------------------SDGTQAVSGGKDFSVK 164 (357)
T ss_dssp ----------------------------------------------------------------SSSSEEEEEETTSCEE
T ss_pred ----------------------------------------------------------------CCCCEEEEEeCCCeEE
Confidence 4677899999999999
Q ss_pred EEECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEe--cccCccEEEEEEcCC---eEEE
Q psy9182 258 VWDRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFSNG---MMVT 329 (486)
Q Consensus 258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~~---~l~~ 329 (486)
+||+.+++.+..+.+|...|.+++| ++ .++++++.||.|++||+++++....+ ..+...+.+++|+|+ ++++
T Consensus 165 iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE
Confidence 9999999999999999999999998 33 57899999999999999998876654 346677999999853 7889
Q ss_pred EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC
Q psy9182 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406 (486)
Q Consensus 330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 406 (486)
|+.|+.|++||+++++.. ..+.+|...|.+++| ++ ++|++++.|++|++||+++++++..+ +|...|++++|+
T Consensus 245 g~~d~~i~~wd~~~~~~~---~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafs 320 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDSA---QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWS 320 (357)
T ss_dssp EESSSCEEEEESSCGGGC---EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEEC
T ss_pred eecccceeEEECCCCcEe---EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEe
Confidence 999999999999987655 556789999999998 44 68999999999999999999877654 799999999984
Q ss_pred ---CCEEEEEeCCCcEEEEECCCCe
Q psy9182 407 ---DRLVVSGSSDNTIRLWDIECGA 428 (486)
Q Consensus 407 ---~~~l~~~~~dg~v~iwd~~~~~ 428 (486)
+.+|++++.||+|++|++.+..
T Consensus 321 P~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 321 PLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCC
Confidence 6899999999999999997643
No 76
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.3e-32 Score=247.44 Aligned_cols=243 Identities=17% Similarity=0.292 Sum_probs=194.4
Q ss_pred ccccccccccCCccCcceEEEeecCceeeeccccc--ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSS--CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~--~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
..|...|.+++|+|+|++||+|+.||+|+|||+.+ ++.+.++.+|.+.|.+++|++. .++.+|++
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~-------------~~g~~l~s 72 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-------------KFGTILAS 72 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG-------------GGCSEEEE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC-------------CcCCEEEE
Confidence 45778899999999999999999999999999974 4678999999999999999631 13678999
Q ss_pred CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEEeC--CCEEEEEecCC
Q psy9182 179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQYD--DHKIVSGLRDN 254 (486)
Q Consensus 179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~--~~~l~~~~~dg 254 (486)
++.|++|++||+.++.... ... ...+...+. +++|+ +.+|++++.||
T Consensus 73 ~s~D~~v~iWd~~~~~~~~--------------------------~~~---~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGRWSQ--------------------------IAV---HAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp EETTTEEEEEEBSSSCBCC--------------------------CEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EcCCCEEEEEEcCCCceEE--------------------------EEE---eecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 9999999999986432110 001 112333444 44555 78999999999
Q ss_pred eEEEEECCCce--eeEEEcCCcccEEEEEec---------------CCEEEEEeCCCcEEEEECCCCc----EEEEeccc
Q psy9182 255 TIKVWDRVSLQ--CIKVLTGHTGSVLCLQYD---------------ERVIISGSSDSTVRVWDVNTGE----MVNTLIHH 313 (486)
Q Consensus 255 ~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~---------------~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~ 313 (486)
.|++||+.++. ....+.+|...|.+++|. +++|++|+.|+.|++||+++++ ....+.+|
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 99999998763 246678899999999984 3589999999999999998776 56778899
Q ss_pred CccEEEEEEcCC-----eEEEEeCCCcEEEEECCCCCceeeEEee--ecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182 314 CEAVLHLRFSNG-----MMVTCSKDRSIAVWDMVSPNEITLRRVL--VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT 384 (486)
Q Consensus 314 ~~~i~~~~~~~~-----~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~ 384 (486)
...|.+++|+|+ ++++++.|+.|++||++........... ..|...|.+++| ++++|++++.|+.|++|+.
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 999999999874 7999999999999999875422111222 467788999988 7899999999999999997
Q ss_pred C
Q psy9182 385 S 385 (486)
Q Consensus 385 ~ 385 (486)
.
T Consensus 284 ~ 284 (297)
T 2pm7_B 284 N 284 (297)
T ss_dssp C
T ss_pred C
Confidence 6
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.3e-32 Score=254.13 Aligned_cols=292 Identities=14% Similarity=0.192 Sum_probs=204.8
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccccc----cceeeecCcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~----~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l 176 (486)
..|...|.++.++|++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|++. .++.+|
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~d~~~l 74 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP-------------EYGRII 74 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG-------------GGCSEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC-------------CCCCEE
Confidence 467889999999999999999999999999999876 467778899999999999631 034455
Q ss_pred ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182 177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI 256 (486)
Q Consensus 177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 256 (486)
++++.||.|++||+.+.....
T Consensus 75 ~s~~~dg~v~vwd~~~~~~~~----------------------------------------------------------- 95 (351)
T 3f3f_A 75 ASASYDKTVKLWEEDPDQEEC----------------------------------------------------------- 95 (351)
T ss_dssp EEEETTSCEEEEEECTTSCTT-----------------------------------------------------------
T ss_pred EEEcCCCeEEEEecCCCcccc-----------------------------------------------------------
Confidence 555555555555543211000
Q ss_pred EEEECCCceeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCcEEEEec-------------ccCccEEE
Q psy9182 257 KVWDRVSLQCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGEMVNTLI-------------HHCEAVLH 319 (486)
Q Consensus 257 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------~~~~~i~~ 319 (486)
.....+.+..+..|...|.+++| + ++++++++.||.|++||+++++.+..+. .+...+.+
T Consensus 96 ---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (351)
T 3f3f_A 96 ---SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFC 172 (351)
T ss_dssp ---SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEE
T ss_pred ---cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeE
Confidence 00011556677789999999999 4 8899999999999999998876543322 46778899
Q ss_pred EEEcC-----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC----CEEEEEeCCCcEEEEECCCce
Q psy9182 320 LRFSN-----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE----KYIVSASGDRTIKVWNTSSCE 388 (486)
Q Consensus 320 ~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~----~~l~~~~~d~~i~iwd~~~~~ 388 (486)
+.|++ ..+++++.++.+.+|+...+.. .....+.+|...|.++.| ++ ++|++++.||.|++||++.+.
T Consensus 173 ~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 173 LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp EEECCCSSSCCEEEEEETTEEEEEEECTTSCE-EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred EEeccCCCCCcEEEEecCCCcEEEEccCCCce-eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 99974 4899999999998777766543 344667789999999999 44 689999999999999998765
Q ss_pred EEEEEcCCcccEEEEEeC------CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182 389 FVRTLNGHKRGIACLQYR------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIK 460 (486)
Q Consensus 389 ~~~~~~~~~~~v~~~~~~------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~ 460 (486)
.......+.......... ......+.....+.+|+....+.+..+.+|...|++++| ++++|++++.||.|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~ 331 (351)
T 3f3f_A 252 SPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVR 331 (351)
T ss_dssp ---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred CccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEE
Confidence 544443333322222221 122233344566777877778889999999999999999 788999999999999
Q ss_pred EEeCCCCC
Q psy9182 461 VWNLVAAL 468 (486)
Q Consensus 461 iwdl~~~~ 468 (486)
+||+.++.
T Consensus 332 iw~~~~~~ 339 (351)
T 3f3f_A 332 LWKATYSN 339 (351)
T ss_dssp EEEECTTS
T ss_pred EEecCcCc
Confidence 99998653
No 78
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.4e-32 Score=254.04 Aligned_cols=241 Identities=15% Similarity=0.241 Sum_probs=187.7
Q ss_pred ccccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
..|...|.++.|+|+|++||+|+.|++|+|||+.+++ .+..+.+|...|.+++|++. .
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~-------------~------- 69 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP-------------M------- 69 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCG-------------G-------
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCC-------------C-------
Confidence 4577889999999999999999999999999998764 56789999999999998520 0
Q ss_pred CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182 179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV 258 (486)
Q Consensus 179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 258 (486)
++++|++|+.|++|++
T Consensus 70 ----------------------------------------------------------------~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 70 ----------------------------------------------------------------YGNILASCSYDRKVII 85 (316)
T ss_dssp ----------------------------------------------------------------GSSCEEEEETTSCEEE
T ss_pred ----------------------------------------------------------------CCCEEEEEECCCEEEE
Confidence 2344556666666666
Q ss_pred EECCCc--eeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCcE---EEEecccCccEEEEEEcCC----
Q psy9182 259 WDRVSL--QCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGEM---VNTLIHHCEAVLHLRFSNG---- 325 (486)
Q Consensus 259 ~d~~~~--~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~i~~~~~~~~---- 325 (486)
||+.++ +....+.+|...|.+++| + +.+|++|+.||.|++||++++.. ...+..|...+.++.|+++
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 666554 345566788888888888 3 56899999999999999876532 2344667778888888753
Q ss_pred ---------------eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC----CEEEEEeCCCcEEEEEC
Q psy9182 326 ---------------MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE----KYIVSASGDRTIKVWNT 384 (486)
Q Consensus 326 ---------------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~----~~l~~~~~d~~i~iwd~ 384 (486)
.+++|+.|+.|++||++..........+.+|...|.+++| ++ .+|++++.|++|++||+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 7999999999999999765443445667889999999999 33 78999999999999998
Q ss_pred CCc---e-EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182 385 SSC---E-FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425 (486)
Q Consensus 385 ~~~---~-~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~ 425 (486)
++. + ....+..|...|.+++|+ +++|++++.||.|++|+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 762 1 234456788899999985 7899999999999999975
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.8e-32 Score=250.49 Aligned_cols=235 Identities=18% Similarity=0.324 Sum_probs=195.2
Q ss_pred CCccceE--EEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCC
Q psy9182 232 ENSKGVY--CLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNT 303 (486)
Q Consensus 232 ~~~~~v~--~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~ 303 (486)
+|...|. ++++++++|++|+.|++|++||+.++. .+..+.+|...|.+++| ++++|++|+.|++|++||+++
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 3444454 556689999999999999999998764 46788999999999998 278999999999999999998
Q ss_pred C--cEEEEecccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC-----------
Q psy9182 304 G--EMVNTLIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD----------- 366 (486)
Q Consensus 304 ~--~~~~~~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~----------- 366 (486)
+ +....+..|...|.+++|+++ ++++|+.|+.|++||++.+..........+|...+.++.|.
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 170 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccc
Confidence 7 466778889999999999864 79999999999999998764433334556788888888873
Q ss_pred --------CCEEEEEeCCCcEEEEECCCc---eEEEEEcCCcccEEEEEeCC------CEEEEEeCCCcEEEEECCCC--
Q psy9182 367 --------EKYIVSASGDRTIKVWNTSSC---EFVRTLNGHKRGIACLQYRD------RLVVSGSSDNTIRLWDIECG-- 427 (486)
Q Consensus 367 --------~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~v~iwd~~~~-- 427 (486)
+++|++++.|+.|++||++.. +.+..+.+|...|.+++|+. .+|++|+.||+|++||+++.
T Consensus 171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS 250 (316)
T ss_dssp CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC
T ss_pred ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc
Confidence 368999999999999999754 56778899999999999952 68999999999999999762
Q ss_pred -e-eeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 428 -A-CLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 428 -~-~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
+ ....+..|...|.+++| ++++|++++.||+|++|+...
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 251 NTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred cchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 1 23345678899999999 889999999999999999763
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.1e-31 Score=274.13 Aligned_cols=286 Identities=21% Similarity=0.394 Sum_probs=242.0
Q ss_pred cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccc
Q psy9182 137 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENN 216 (486)
Q Consensus 137 ~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (486)
+..+.+.+|.+.|.+++|+ +++..|++++.||.|++||+.++..
T Consensus 4 ~~~~~~~~h~~~v~~i~~s---------------p~~~~la~~~~~g~v~iwd~~~~~~--------------------- 47 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFH---------------PTEPWVLTTLYSGRVEIWNYETQVE--------------------- 47 (814)
T ss_dssp CCEEEEEEECSCEEEEEEC---------------SSSSEEEEEETTSEEEEEETTTTEE---------------------
T ss_pred ccceeeecCCCceEEEEEC---------------CCCCEEEEEeCCCEEEEEECCCCce---------------------
Confidence 4567889999999999998 6888899999999999999855321
Q ss_pred cccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC
Q psy9182 217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS 294 (486)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 294 (486)
...+. .+.......++++++++|++|+.||.|++||+.+++.+..+.+|...|.+++| +++++++++.||
T Consensus 48 -------~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 119 (814)
T 3mkq_A 48 -------VRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL 119 (814)
T ss_dssp -------EEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred -------EEEEe-cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCC
Confidence 22222 12234455667889999999999999999999999999999999999999999 788999999999
Q ss_pred cEEEEECCCC-cEEEEecccCccEEEEEEcC-C--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe----C
Q psy9182 295 TVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN-G--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF----D 366 (486)
Q Consensus 295 ~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~-~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~----~ 366 (486)
.|++||+.++ .....+..|...+.+++|++ + .+++++.||.|++||+.++.... .....+...+.++.+ +
T Consensus 120 ~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~ 197 (814)
T 3mkq_A 120 TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF--TLTTGQERGVNYVDYYPLPD 197 (814)
T ss_dssp EEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE--EEECCCTTCCCEEEECCSTT
T ss_pred EEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee--EEecCCCCCEEEEEEEECCC
Confidence 9999999987 67778888999999999987 3 89999999999999998776543 223344477777777 6
Q ss_pred CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEE
Q psy9182 367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 444 (486)
Q Consensus 367 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~ 444 (486)
+.++++++.||.|++||+.+++.+..+.+|...+.++.++ ++++++++.||.|++||+.+++.+..+..|...+.+++
T Consensus 198 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~ 277 (814)
T 3mkq_A 198 KPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIA 277 (814)
T ss_dssp CCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEE
Confidence 8899999999999999999999999999999999999985 78999999999999999999999999999999999999
Q ss_pred e--cCCE-EEEEeCCCcEEEEeCCCCC
Q psy9182 445 F--DAKR-IVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 445 ~--~~~~-l~s~~~dg~v~iwdl~~~~ 468 (486)
| ++.. +++++.|+.+.+|++....
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 278 THPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp ECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred EccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 9 4442 3555557779999987643
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=258.08 Aligned_cols=310 Identities=15% Similarity=0.221 Sum_probs=220.7
Q ss_pred ccccccccCCccCcceEEEeecCceeeeccccccc-----------ceeeecCcc------------cceeEEEeeccee
Q psy9182 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE-----------FVRTLNGHK------------RGIACLQYRDRLV 159 (486)
Q Consensus 103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~-----------~~~~l~~h~------------~~V~~~~~~~~~~ 159 (486)
+...|.++.++|+|++||+|+.||.|+|||+.+++ .+..+.+|. ..|.+++|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~--- 103 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP--- 103 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC---
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC---
Confidence 45678999999999999999999999999999877 588899998 8899999973
Q ss_pred EecCCCCceeccCc--ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce
Q psy9182 160 VSGSSDNTIRYRDE--FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV 237 (486)
Q Consensus 160 ~~~~~d~~i~~~~~--~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (486)
++ ..|++++.|+.|++||+.+........ . ...+....
T Consensus 104 ------------~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~---------------------------~-~~~~~g~~ 143 (447)
T 3dw8_B 104 ------------QKNAAQFLLSTNDKTIKLWKISERDKRPEGY---------------------------N-LKEEDGRY 143 (447)
T ss_dssp ------------CCSSSEEEEEECSSCEEEEEEEEEEEEEECC---------------------------S-CC------
T ss_pred ------------CCCcceEEEeCCCCeEEEEecccccCCccee---------------------------c-ccCccccc
Confidence 44 678999999999999986533211000 0 00000000
Q ss_pred EEEEeCCCE-EEEEecCCeEEEEECCCceeeEEE-cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC-CcEEEE---
Q psy9182 238 YCLQYDDHK-IVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT-GEMVNT--- 309 (486)
Q Consensus 238 ~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~-~~~~~~--- 309 (486)
.....-... +......+ |.. .......+ .+|...|.+++| ++++|++| .||.|++||+++ ++....
T Consensus 144 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~ 217 (447)
T 3dw8_B 144 RDPTTVTTLRVPVFRPMD----LMV-EASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDI 217 (447)
T ss_dssp --CCCCCSCCCCEEEEEE----EEE-EEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEEC
T ss_pred cCcccccceEeccccchh----eee-eccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeec
Confidence 000000000 00000000 100 11223333 679999999999 78899998 799999999984 444442
Q ss_pred ----ecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCce-eeEEeeecCcc------------cEEEEEe--CC
Q psy9182 310 ----LIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEI-TLRRVLVGHRA------------AVNVVDF--DE 367 (486)
Q Consensus 310 ----~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~------------~v~~~~~--~~ 367 (486)
+..|...|.+++|++ ..+++|+.||.|++||+++++.. .....+..|.. .|.++.| ++
T Consensus 218 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 297 (447)
T 3dw8_B 218 KPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG 297 (447)
T ss_dssp CCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS
T ss_pred ccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC
Confidence 457889999999986 47999999999999999987641 11244555554 8999999 78
Q ss_pred CEEEEEeCCCcEEEEECCC-ceEEEEEcCCcccE-----------------EEEEeCCCEEEEEeCCCcEEEEECCCCee
Q psy9182 368 KYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGI-----------------ACLQYRDRLVVSGSSDNTIRLWDIECGAC 429 (486)
Q Consensus 368 ~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v-----------------~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 429 (486)
++|++++. +.|++||+++ ++++..+.+|...+ .++..++++|++|+.||.|++||+.+++.
T Consensus 298 ~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 298 RYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp SEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred CEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 89999999 9999999997 88888898886422 23444689999999999999999998887
Q ss_pred eEEecC---------------------------------cccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182 430 LRVLEG---------------------------------HEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 430 ~~~~~~---------------------------------h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl 464 (486)
+. +.+ +...|..++| ++++|++++.++ +++|.-
T Consensus 377 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 377 IT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred ee-eeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 63 222 2346888999 888999988776 888864
No 82
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-31 Score=256.56 Aligned_cols=267 Identities=15% Similarity=0.240 Sum_probs=201.4
Q ss_pred CCccCcceEEEeecCceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceecc-CcceeecCCCCCcceee
Q psy9182 111 LPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYR-DEFQIVSSSHDDTILIW 188 (486)
Q Consensus 111 ~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~-~~~~l~s~s~dg~i~vW 188 (486)
.|+|++..+++++ .|+ .+++++..+ .+|.+.|.+++|+ + ++.+|++++.||+|++|
T Consensus 34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s---------------~~~~~~l~s~s~dg~v~vw 91 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVS---------------PGETPYLITGSDQGVIKIW 91 (437)
T ss_dssp GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEE---------------CSSSCEEEEEETTSEEEEE
T ss_pred hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEEC---------------CCCCCEEEEecCCceEEEe
Confidence 4678888888776 498 557889998 8999999999997 3 55566666666666666
Q ss_pred ecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeE
Q psy9182 189 DFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK 268 (486)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 268 (486)
|+.+..... ..+...
T Consensus 92 d~~~~~~~~-----------------------------------------------------------------~~~~~~ 106 (437)
T 3gre_A 92 NLKEIIVGE-----------------------------------------------------------------VYSSSL 106 (437)
T ss_dssp EHHHHHTTC-----------------------------------------------------------------CCSCSE
T ss_pred ECcccccCc-----------------------------------------------------------------ccceee
Confidence 653311000 001111
Q ss_pred EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECC---CCcEEEEecc------------cCccEEEEEEc----CCeE
Q psy9182 269 VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVN---TGEMVNTLIH------------HCEAVLHLRFS----NGMM 327 (486)
Q Consensus 269 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~~------------~~~~i~~~~~~----~~~l 327 (486)
.+ .|...|.+++| ++++|++|+.||.|++||+. +++....... +...+.++.+. +..+
T Consensus 107 ~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 107 TY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp EE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred ec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 22 26677777777 56777777778888888773 4444333221 34556666643 4499
Q ss_pred EEEeCCCcEEEEECCCCCceeeEEeeec--CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc-CCcccEEE
Q psy9182 328 VTCSKDRSIAVWDMVSPNEITLRRVLVG--HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIAC 402 (486)
Q Consensus 328 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~ 402 (486)
++++.|+.|++||+++++.. ..+.+ |...|.++.| ++++|++++.||.|++||+++++++..+. .|...|.+
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERL---QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITH 262 (437)
T ss_dssp EEEETTSEEEEEETTTCCEE---EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeee---EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEE
Confidence 99999999999999988755 34444 7889999999 78999999999999999999999999987 78889999
Q ss_pred EEeC------CCEEEEEeCCCcEEEEECCCCeeeEEecC--------------------------cccCeEEEEe-cCCE
Q psy9182 403 LQYR------DRLVVSGSSDNTIRLWDIECGACLRVLEG--------------------------HEELVRCIRF-DAKR 449 (486)
Q Consensus 403 ~~~~------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--------------------------h~~~v~~~~~-~~~~ 449 (486)
+.+. +.+|++|+.||.|++||+++++++..+.+ |...|++++| ++++
T Consensus 263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~ 342 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKI 342 (437)
T ss_dssp EEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEE
T ss_pred EEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceE
Confidence 9664 45899999999999999999998888764 4456888888 6778
Q ss_pred EEEEeCCCcEEEEeCCCCC
Q psy9182 450 IVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 450 l~s~~~dg~v~iwdl~~~~ 468 (486)
|++|+.||.|++||+.++.
T Consensus 343 l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 343 LLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp EEEEGGGTEEEEEETTCGG
T ss_pred EEecCCCCeEEEEECCCcc
Confidence 9999999999999998654
No 83
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.1e-30 Score=239.35 Aligned_cols=235 Identities=25% Similarity=0.408 Sum_probs=194.6
Q ss_pred cCCCccceEEEEe--------CCCEEEEEecCCeEEEEECCC-------ceeeEEEcCCcccEEEEEe--cCCEEEEEeC
Q psy9182 230 RSENSKGVYCLQY--------DDHKIVSGLRDNTIKVWDRVS-------LQCIKVLTGHTGSVLCLQY--DERVIISGSS 292 (486)
Q Consensus 230 ~~~~~~~v~~~~~--------~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 292 (486)
..+|...|.++.+ ++++|++|+.|++|++||+.+ +.....+.+|...|.++++ ++.++++|+.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 4467777777754 788999999999999999864 4567788999999999998 7889999999
Q ss_pred CCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC--C-
Q psy9182 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--E- 367 (486)
Q Consensus 293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~- 367 (486)
|++|++||+++++.+..+.+|...|.+++|+++ .+++++.|+.|++||+.... ........+|...+.++.|. +
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMK 175 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeeccccc
Confidence 999999999999999999999999999999864 89999999999999997432 21112223688889999983 2
Q ss_pred ---------CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC-CeeeEEecC
Q psy9182 368 ---------KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC-GACLRVLEG 435 (486)
Q Consensus 368 ---------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~ 435 (486)
.++++++.|+.|++|| ...+....+.+|...|.+++|+ +++|++|+.||.|++||+.+ ......+.
T Consensus 176 ~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~- 253 (343)
T 2xzm_R 176 SANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD- 253 (343)
T ss_dssp SCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-
T ss_pred cccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-
Confidence 6899999999999999 4567788899999999999984 88999999999999999944 44444443
Q ss_pred cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 436 HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 436 h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
+...|.+++| ++.+++ ++.|+.|++||+.+..
T Consensus 254 ~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 254 AGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQS 287 (343)
T ss_dssp CSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCC
T ss_pred CCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCC
Confidence 4567999999 555555 5568889999998754
No 84
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-30 Score=249.43 Aligned_cols=290 Identities=10% Similarity=0.114 Sum_probs=220.6
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
.+..-+.++.++|||+++||++.|++|+ |.. ..+.+++|...|.+++|+| ++ .
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~---~~~~l~gh~~~v~~V~FsP---------------dg-------~ 65 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPK---YAKDINCNSKNLFHVKEFP---------------LE-------F 65 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EEC---CCSCCSSBGGGTEEEEEEC---------------CC-------C
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccc---ccceecCCCccEEEEEECC---------------CC-------C
Confidence 3456788999999999999999999999 644 4455689999999999974 33 3
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR 261 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~ 261 (486)
++.+.+|+..... .... ........++++|+|+.||+++.||.|++||.
T Consensus 66 ~~~~~~~~~~~~~---~~~~----------------------------~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~ 114 (588)
T 2j04_A 66 ENKLDFELAQQNG---LLNS----------------------------QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKD 114 (588)
T ss_dssp CCTTTTSCCCSSC---SSTT----------------------------SCSCCEEEEEECSSSSCEEEEETTSCEEEEET
T ss_pred cceEEEEeCCCce---Eeec----------------------------CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 5555555532111 1100 01234556778889999999999999999995
Q ss_pred CCceeeEEEcCCcc-----cEEEEEe--cCCEEEEEeCCCcEEEEECCCCc-------EEEEe----cccCccEEEEEEc
Q psy9182 262 VSLQCIKVLTGHTG-----SVLCLQY--DERVIISGSSDSTVRVWDVNTGE-------MVNTL----IHHCEAVLHLRFS 323 (486)
Q Consensus 262 ~~~~~~~~~~~~~~-----~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~-------~~~~~----~~~~~~i~~~~~~ 323 (486)
.. ++..+. |.. .+.+++| ||++|++|+.||+|++||+.++. .+.++ .+|...|.+++|+
T Consensus 115 ~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS 191 (588)
T 2j04_A 115 NK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY 191 (588)
T ss_dssp TE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred Cc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence 44 666666 665 4899998 89999999999999999999885 35666 5677899999999
Q ss_pred CCeEEEEeCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC 402 (486)
Q Consensus 324 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 402 (486)
|+-+++++.|+.|++||+..+........+ .+|...|.+++|.++.+++++ ++.|++||+.+++......+|...+..
T Consensus 192 PdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~ 270 (588)
T 2j04_A 192 EDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHI 270 (588)
T ss_dssp TTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCE
T ss_pred CCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEE
Confidence 877999999999999999887643222334 478889999999778999887 699999999988874444489999998
Q ss_pred EEe--C--CCEEEEEeCCCcEEEEECCC-----------------------CeeeEEecCcccCeEEEEe--cCCEEEEE
Q psy9182 403 LQY--R--DRLVVSGSSDNTIRLWDIEC-----------------------GACLRVLEGHEELVRCIRF--DAKRIVSG 453 (486)
Q Consensus 403 ~~~--~--~~~l~~~~~dg~v~iwd~~~-----------------------~~~~~~~~~h~~~v~~~~~--~~~~l~s~ 453 (486)
+.+ + +..+++++.||+ ++|..+. +..+..++ +...|.+++| ||+.+|++
T Consensus 271 va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG~~lA~~ 348 (588)
T 2j04_A 271 IPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSPDGYSIAIV 348 (588)
T ss_dssp EEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECTTSSEEEEE
T ss_pred EEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec-cceEEEEEEECCCCCEEEEE
Confidence 888 4 567999999999 9998752 01111111 2345888888 88888887
Q ss_pred eC
Q psy9182 454 AY 455 (486)
Q Consensus 454 ~~ 455 (486)
+.
T Consensus 349 ~~ 350 (588)
T 2j04_A 349 YD 350 (588)
T ss_dssp EE
T ss_pred Ee
Confidence 63
No 85
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.4e-30 Score=242.96 Aligned_cols=288 Identities=14% Similarity=0.160 Sum_probs=208.8
Q ss_pred ecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCC
Q psy9182 130 VWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPS 209 (486)
Q Consensus 130 iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~ 209 (486)
||++.+.+.+.++.+|...|.+++|+ +|+.+|++|+.++ +++||+.+....
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs---------------~dg~~la~g~~~~-~~iw~~~~~~~~------------- 53 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFN---------------QDQSCLILSTLKS-FEIYNVHPVAHI------------- 53 (355)
T ss_dssp ----------------CCCCCEEEEC---------------TTSSEEEEECSSE-EEEEEETTEEEE-------------
T ss_pred cccccccCCccccccCCCceEEEEEC---------------CCCCEEEEEcCCE-EEEEecCCccee-------------
Confidence 57777888888889999999999998 6788888888775 789997543211
Q ss_pred CcccccccccCceeEEEEeccCCCccceEEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEE
Q psy9182 210 GPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVII 288 (486)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 288 (486)
... ......+.++.++++.+ ++++.|+.|++||..+++.+..+. +...|.++.++++.++
T Consensus 54 ---------------~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~ 114 (355)
T 3vu4_A 54 ---------------MSQ---EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIV 114 (355)
T ss_dssp ---------------EEE---ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEE
T ss_pred ---------------eee---ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEE
Confidence 001 11235566777777776 567888999999999999999887 6678999999888777
Q ss_pred EEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcCCeEEE--EeCCCcEEEEECCCCCce------------ee-EEe
Q psy9182 289 SGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSNGMMVT--CSKDRSIAVWDMVSPNEI------------TL-RRV 352 (486)
Q Consensus 289 ~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~------------~~-~~~ 352 (486)
++. |+.|++||+.++ +.+..+.. ....++++++.+++ |+.+|.|++||+.++... .. ...
T Consensus 115 ~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (355)
T 3vu4_A 115 VSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL 190 (355)
T ss_dssp EEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEE
T ss_pred EEE-cCEEEEEECCCCceeeEEecc---CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEE
Confidence 765 789999999988 65555544 33344555677776 578999999999875411 01 356
Q ss_pred eecCcccEEEEEe--CCCEEEEEeCCCc-EEEEECCCceEEEEEc-C-CcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182 353 LVGHRAAVNVVDF--DEKYIVSASGDRT-IKVWNTSSCEFVRTLN-G-HKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425 (486)
Q Consensus 353 ~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~-~-~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~ 425 (486)
+.+|...|.+++| ++++|++++.|++ |++||+++++++..+. + |...|.+++|+ +++|++++.|++|++||++
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 7789999999999 8899999999998 9999999999999998 5 99999999995 7899999999999999997
Q ss_pred CCee--eEEec---------------------CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 426 CGAC--LRVLE---------------------GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 426 ~~~~--~~~~~---------------------~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
.+.. ...+. .+......++| ++++|++++.||.+++|++..+.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 271 NDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp CCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred CCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 6531 11111 11223366888 888999999999999999986543
No 86
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=6e-31 Score=248.47 Aligned_cols=278 Identities=14% Similarity=0.196 Sum_probs=220.9
Q ss_pred ccccccccccCCccC---cceEEEeecCceeeeccccc-ccce-eeecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182 101 PMLQRDFISLLPNFD---EKYIVSASGDRTIKVWNTSS-CEFV-RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ 175 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~---~~~l~tg~~dg~v~iWd~~~-~~~~-~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~ 175 (486)
..|...|.++.++|+ |++|++|+.||.|+|||+.+ +..+ ..+.+|...|.+++|+ +++.+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~---------------~~~~~ 100 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWS---------------DDGSK 100 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEEC---------------TTSSE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEEC---------------cCCCE
Confidence 557788999999999 69999999999999999997 5554 7889999999999997 57788
Q ss_pred eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEE--EeCCCEEEEEecC
Q psy9182 176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCL--QYDDHKIVSGLRD 253 (486)
Q Consensus 176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d 253 (486)
|++++.||.|++||+.+.... . ... .......+++ ++++.++++++.|
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~----------------------------~-~~~-~~~~v~~~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAI----------------------------Q-IAQ-HDAPVKTIHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEE----------------------------E-EEE-CSSCEEEEEEEECSSCEEEEEEETT
T ss_pred EEEEcCCCcEEEEEcCCCCce----------------------------e-ecc-ccCceEEEEEEeCCCCCEEEEccCC
Confidence 999999999999998653311 1 111 1222333344 5578889999999
Q ss_pred CeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEec--ccCccEEEEEE--cCC----
Q psy9182 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRF--SNG---- 325 (486)
Q Consensus 254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~i~~~~~--~~~---- 325 (486)
|.|++||+.+++.+..+..+. .+.++.+.+..+++++.++.+.+||++......... .....+.++.+ ...
T Consensus 151 g~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (368)
T 3mmy_A 151 KTLKFWDTRSSNPMMVLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPT 229 (368)
T ss_dssp SEEEEECSSCSSCSEEEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEE
T ss_pred CcEEEEECCCCcEEEEEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCC
Confidence 999999999999999888664 678888888899999999999999998765543332 22333444443 333
Q ss_pred eEEEEeCCCcEEEEECCCCCceeeEEeeecCcc------------cEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA------------AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVR 391 (486)
Q Consensus 326 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------------~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~ 391 (486)
.+++++.||.|++||++..........+..|.. .|.++.| ++++|++++.||.|++||+.+++++.
T Consensus 230 ~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 230 GFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp EEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred eEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 499999999999999988754333345556655 6999998 78899999999999999999999999
Q ss_pred EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182 392 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 424 (486)
Q Consensus 392 ~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~ 424 (486)
.+..|...|.+++|+ +++|++++.|+..+.|++
T Consensus 310 ~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 310 TSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp ECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred EecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 999999999999994 889999999886555543
No 87
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.1e-30 Score=242.66 Aligned_cols=224 Identities=20% Similarity=0.377 Sum_probs=189.6
Q ss_pred eCCCEEEEEecCCeEEEEECC--CceeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCc--EEEEeccc
Q psy9182 242 YDDHKIVSGLRDNTIKVWDRV--SLQCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGE--MVNTLIHH 313 (486)
Q Consensus 242 ~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~ 313 (486)
+++++|++|+.||.|++||+. +++.+..+.+|...|.+++| + +++|++++.||.|++||+.+++ .+..+..|
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 100 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH 100 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC
Confidence 456677777778888888776 56677888899999999998 3 8999999999999999999987 67778889
Q ss_pred CccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC---------------CCEEEEEe
Q psy9182 314 CEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---------------EKYIVSAS 374 (486)
Q Consensus 314 ~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~l~~~~ 374 (486)
...|.+++|+++ .+++++.|+.|++||++...... ......|...|.++.|. +.++++++
T Consensus 101 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 179 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 179 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC-EEEEECCTTCEEEEEECCCC----------CTTCEEEEEE
T ss_pred CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee-eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe
Confidence 999999999854 89999999999999998875432 23456789999999983 68999999
Q ss_pred CCCcEEEEECCCce----EEEEEcCCcccEEEEEeC-----CCEEEEEeCCCcEEEEECCCCe---eeEEe--cCcccCe
Q psy9182 375 GDRTIKVWNTSSCE----FVRTLNGHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGA---CLRVL--EGHEELV 440 (486)
Q Consensus 375 ~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~-----~~~l~~~~~dg~v~iwd~~~~~---~~~~~--~~h~~~v 440 (486)
.|+.|++||+++++ ....+.+|...|.++.|+ +++|++++.||.|++||++++. ....+ ..|...|
T Consensus 180 ~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v 259 (379)
T 3jrp_A 180 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 259 (379)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE
T ss_pred CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcE
Confidence 99999999998753 556788999999999995 6789999999999999998864 22222 3488899
Q ss_pred EEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 441 RCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 441 ~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
++++| ++++|++++.||.|++|++..
T Consensus 260 ~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 260 WRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 99999 889999999999999999984
No 88
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=8.6e-29 Score=228.29 Aligned_cols=219 Identities=29% Similarity=0.486 Sum_probs=192.8
Q ss_pred eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC---cEEEEecccCcc
Q psy9182 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG---EMVNTLIHHCEA 316 (486)
Q Consensus 242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~ 316 (486)
++++++++|+.||.|++||+.+++....+..|...|.+++| +++++++++.||.|++|++... +.+..+..|...
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~ 106 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGN 106 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSC
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccC
Confidence 47788999999999999999999999999999999999998 7899999999999999998754 567778889999
Q ss_pred EEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTL 393 (486)
Q Consensus 317 i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 393 (486)
|.++.++++.+++++.||.|++|| ..+ .......|...+.++.+ +++++++++.|+.|++|| ..+....+
T Consensus 107 i~~~~~~~~~l~~~~~d~~i~~~d--~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~ 179 (313)
T 3odt_A 107 VCSLSFQDGVVISGSWDKTAKVWK--EGS---LVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTF 179 (313)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEE--TTE---EEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEE
T ss_pred EEEEEecCCEEEEEeCCCCEEEEc--CCc---EEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEE
Confidence 999999999999999999999999 222 33556678889988887 789999999999999999 55677777
Q ss_pred cC-CcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 394 NG-HKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 394 ~~-~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
.. |...+.++.++ +..+++++.||.|++||+++++.+..+.+|...|++++| ++ .|++++.||.|++||+.++.
T Consensus 180 ~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 180 SGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp CSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC
T ss_pred eccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc
Confidence 77 88999999885 344999999999999999999999999999999999999 44 79999999999999998764
No 89
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=8.1e-31 Score=247.46 Aligned_cols=241 Identities=19% Similarity=0.356 Sum_probs=201.4
Q ss_pred ccccccccccCCccC----cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182 101 PMLQRDFISLLPNFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI 176 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~----~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l 176 (486)
+.+...+.+++++|+ +.+|++|+.||.|++||+.+++.+..+.+|...|.+++|++
T Consensus 66 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-------------------- 125 (366)
T 3k26_A 66 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP-------------------- 125 (366)
T ss_dssp SCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECS--------------------
T ss_pred cCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECC--------------------
Confidence 345677999999999 67999999999999999999999999999999999998852
Q ss_pred ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182 177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI 256 (486)
Q Consensus 177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 256 (486)
.++.++++|+.||.|
T Consensus 126 -----------------------------------------------------------------~~~~~l~s~~~dg~i 140 (366)
T 3k26_A 126 -----------------------------------------------------------------RDPNLLLSVSKDHAL 140 (366)
T ss_dssp -----------------------------------------------------------------SCTTEEEEEETTSCE
T ss_pred -----------------------------------------------------------------CCCCEEEEEeCCCeE
Confidence 045667888888888
Q ss_pred EEEECCCceeeEEE---cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec--------------------
Q psy9182 257 KVWDRVSLQCIKVL---TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-------------------- 311 (486)
Q Consensus 257 ~i~d~~~~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------------- 311 (486)
++||+.+++.+..+ .+|...|.++.| +++++++++.||.|++||+++++....+.
T Consensus 141 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (366)
T 3k26_A 141 RLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH 220 (366)
T ss_dssp EEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred EEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence 88888888888887 678899999988 67899999999999999998765443332
Q ss_pred --------ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc-----------eeeEEeeecCcccEEEEEe--C--CC
Q psy9182 312 --------HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE-----------ITLRRVLVGHRAAVNVVDF--D--EK 368 (486)
Q Consensus 312 --------~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~~~v~~~~~--~--~~ 368 (486)
.|...|.++.|+++.+++++.|+.|++||+.+... ......+..|...|.++.+ + ++
T Consensus 221 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 300 (366)
T 3k26_A 221 FPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK 300 (366)
T ss_dssp CCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS
T ss_pred cCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc
Confidence 38889999999999999999999999999987643 1234556678888887777 6 89
Q ss_pred EEEEEeCCCcEEEEECCCce----EEEEEcCC--cccEEEEEeC--CCEEEEEeCCCcEEEEECCC
Q psy9182 369 YIVSASGDRTIKVWNTSSCE----FVRTLNGH--KRGIACLQYR--DRLVVSGSSDNTIRLWDIEC 426 (486)
Q Consensus 369 ~l~~~~~d~~i~iwd~~~~~----~~~~~~~~--~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~ 426 (486)
+|++++.||.|++||+.+++ ....+..| ...|.++.|+ +++|++++.||.|++||+.+
T Consensus 301 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 301 MLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99999999999999999875 44577877 7899999995 88999999999999999853
No 90
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.3e-29 Score=240.50 Aligned_cols=242 Identities=15% Similarity=0.255 Sum_probs=211.5
Q ss_pred EEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce------eeEEEcCCcccEEEEEe--c----C---CEEEE
Q psy9182 225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ------CIKVLTGHTGSVLCLQY--D----E---RVIIS 289 (486)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~v~~~~~--~----~---~~l~~ 289 (486)
........|...+.++.+++++|++|+.||.|++||+.+++ .+..+.+|...|.++.| + + ++|++
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 33444567888999999988999999999999999999987 78888899999999998 6 7 89999
Q ss_pred EeCCCcEEEEECCCCcE-----EEEeccc-----CccEEEEEEc----CC--e-EEEEeCCCcEEEEECCC------CCc
Q psy9182 290 GSSDSTVRVWDVNTGEM-----VNTLIHH-----CEAVLHLRFS----NG--M-MVTCSKDRSIAVWDMVS------PNE 346 (486)
Q Consensus 290 ~~~dg~i~vwd~~~~~~-----~~~~~~~-----~~~i~~~~~~----~~--~-l~~~~~dg~i~i~d~~~------~~~ 346 (486)
++.||.|++||+.+++. ...+..| ...|.++.|+ ++ . +++++.||.|++||+.. ++.
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 99999999999998886 8888888 5899999999 54 7 99999999999999988 544
Q ss_pred ee--eEEee-------ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC---C---cccEEEEEeC--C
Q psy9182 347 IT--LRRVL-------VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG---H---KRGIACLQYR--D 407 (486)
Q Consensus 347 ~~--~~~~~-------~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~---~~~v~~~~~~--~ 407 (486)
.. ....+ ..|...+.++.+ ++ ++++++.|+.|++||+++++.+..+.. | ...+.++.++ +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence 32 00122 447888999998 57 999999999999999999999999998 9 9999999994 8
Q ss_pred CEEEEEeCC---CcEEEEECCCCeeeEEecC-------------cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 408 RLVVSGSSD---NTIRLWDIECGACLRVLEG-------------HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 408 ~~l~~~~~d---g~v~iwd~~~~~~~~~~~~-------------h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
++|++++.| |.|++||+++++.+..+.+ |...|.+++| ++++|++++.||.|++||+.+.
T Consensus 246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999 9999999999999999998 9999999999 7899999999999999999865
No 91
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=3.5e-29 Score=256.61 Aligned_cols=222 Identities=32% Similarity=0.548 Sum_probs=185.0
Q ss_pred CEEEEEecCCeEEEEECCC-----ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182 245 HKIVSGLRDNTIKVWDRVS-----LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317 (486)
Q Consensus 245 ~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i 317 (486)
++|++|+.||+|++||+.+ +.....+.+|...|.++++ ++++|++|+.||.|++||+.+++....+.+|...|
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v 475 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV 475 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCE
Confidence 4555666666666665543 3345678899999999998 78999999999999999999999999999999999
Q ss_pred EEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC--CEEEEEeCCCcEEEEECCCceEEE
Q psy9182 318 LHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE--KYIVSASGDRTIKVWNTSSCEFVR 391 (486)
Q Consensus 318 ~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~--~~l~~~~~d~~i~iwd~~~~~~~~ 391 (486)
.+++|+++ .+++++.|+.|++||..............+|...|.++.| ++ ..+++++.|+.|++||+++++...
T Consensus 476 ~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~ 555 (694)
T 3dm0_A 476 LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 555 (694)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE
Confidence 99999864 8999999999999998665433222233578889999999 32 589999999999999999999999
Q ss_pred EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 392 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 392 ~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.+.+|...|.++.++ +++|++|+.||.|++||+++++.+..+.. ...|.+++| ++.+|+++ .|+.|++||+.++
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~-~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAA-TEHGIKIWDLESK 633 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEE-ETTEEEEEETTTT
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEE-cCCCEEEEECCCC
Confidence 999999999999995 88999999999999999999999888765 467999999 55555555 5677999999875
Q ss_pred C
Q psy9182 468 L 468 (486)
Q Consensus 468 ~ 468 (486)
.
T Consensus 634 ~ 634 (694)
T 3dm0_A 634 S 634 (694)
T ss_dssp E
T ss_pred C
Confidence 3
No 92
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-29 Score=239.08 Aligned_cols=243 Identities=20% Similarity=0.293 Sum_probs=202.9
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccc--cccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTS--SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~--~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
..|...|.+++++|++++|++|+.||.|+|||+. +++.+..+.+|...|.+++|++.
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~--------------------- 66 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP--------------------- 66 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG---------------------
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC---------------------
Confidence 4677889999999999999999999999999998 67788899999999999988520
Q ss_pred CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182 179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV 258 (486)
Q Consensus 179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 258 (486)
.++.+|++++.||.|++
T Consensus 67 ---------------------------------------------------------------~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 67 ---------------------------------------------------------------KFGTILASCSYDGKVLI 83 (379)
T ss_dssp ---------------------------------------------------------------GGCSEEEEEETTSCEEE
T ss_pred ---------------------------------------------------------------CCCCEEEEeccCCEEEE
Confidence 12556777777788888
Q ss_pred EECCCce--eeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCc--EEEEecccCccEEEEEEcC------
Q psy9182 259 WDRVSLQ--CIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGE--MVNTLIHHCEAVLHLRFSN------ 324 (486)
Q Consensus 259 ~d~~~~~--~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~~~------ 324 (486)
||+.+++ .+..+..|...|.+++| + +.++++++.||.|++||++++. ....+..|...|.++.|++
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 8877776 66777889999999999 4 7899999999999999998873 4456678899999999986
Q ss_pred ---------CeEEEEeCCCcEEEEECCCCCce-eeEEeeecCcccEEEEEe--C---CCEEEEEeCCCcEEEEECCCce-
Q psy9182 325 ---------GMMVTCSKDRSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF--D---EKYIVSASGDRTIKVWNTSSCE- 388 (486)
Q Consensus 325 ---------~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~--~---~~~l~~~~~d~~i~iwd~~~~~- 388 (486)
..+++++.||.|++||++.+... .....+.+|...|.++.| + +++|++++.||.|++||++++.
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence 48999999999999999876543 344567789999999999 5 7899999999999999998864
Q ss_pred --EEEE--EcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCC
Q psy9182 389 --FVRT--LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 427 (486)
Q Consensus 389 --~~~~--~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~ 427 (486)
.... ...|...+.++.| ++++|++++.||.|++|++..+
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 244 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred cceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 2222 2348889999988 4889999999999999999754
No 93
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8e-31 Score=256.71 Aligned_cols=225 Identities=13% Similarity=0.130 Sum_probs=179.4
Q ss_pred EeCCCEEEEEecCCeEEEEECCCceee----EEEcCCcccEEEEEec--------CCEEEEEeCCCcEEEEECCCCcE--
Q psy9182 241 QYDDHKIVSGLRDNTIKVWDRVSLQCI----KVLTGHTGSVLCLQYD--------ERVIISGSSDSTVRVWDVNTGEM-- 306 (486)
Q Consensus 241 ~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~v~~~~~~--------~~~l~~~~~dg~i~vwd~~~~~~-- 306 (486)
+++++.+++++.|++|+|||+.+++.. ..+..|.+.|.+++|. +.+|++++.||+|++||+.++..
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 467788999999999999998776542 3456778899999993 36999999999999999987642
Q ss_pred ---------EEEecccCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEE--Ee--CC-CEEE
Q psy9182 307 ---------VNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF--DE-KYIV 371 (486)
Q Consensus 307 ---------~~~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~--~~--~~-~~l~ 371 (486)
...+..|...|.+++|++ +.|++|+.||.|++||++++... ...+.+|...|.++ .+ ++ .+|+
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~--~~~~~~H~~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVP--SFYDQVHDSYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSC--SEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred ccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCc--eEEeecccccEEEEEEEcCCCCCeEEE
Confidence 236678889999999975 59999999999999999876432 24467899999999 44 45 7999
Q ss_pred EEeCCCcEEEEECCCceEEEEEcCCcc--cEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--
Q psy9182 372 SASGDRTIKVWNTSSCEFVRTLNGHKR--GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 445 (486)
Q Consensus 372 ~~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-- 445 (486)
+++.|++|++||+++++++..+.+|.. .|.+++| ++..+++++.|++|++||++++.++..+.+|.+.|++|+|
T Consensus 328 S~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp 407 (524)
T 2j04_B 328 TVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR 407 (524)
T ss_dssp EEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS
T ss_pred EeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC
Confidence 999999999999999888777777653 4666666 4778999999999999999999998899999999999999
Q ss_pred cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 446 DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 446 ~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
++.+|++|+.||+|++||+...
T Consensus 408 ~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 408 LHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp SCCBCEEEETTTEEECCBSCSS
T ss_pred CCCeEEEEECCCEEEEEechHh
Confidence 8889999999999999998654
No 94
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.6e-30 Score=246.55 Aligned_cols=270 Identities=22% Similarity=0.306 Sum_probs=207.0
Q ss_pred cccCCccCcceE-EEeecCceeeecccccc----cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182 108 ISLLPNFDEKYI-VSASGDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD 182 (486)
Q Consensus 108 ~~~~~s~~~~~l-~tg~~dg~v~iWd~~~~----~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d 182 (486)
..+.++|+...+ ++|+.||.|+|||+... +.+..+.+|...|.+++|++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~------------------------- 92 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPH------------------------- 92 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTT-------------------------
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCC-------------------------
Confidence 345566666544 45788999999998653 345567889999999888520
Q ss_pred CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262 (486)
Q Consensus 183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~ 262 (486)
++++|++|+.||.|++||+.
T Consensus 93 ------------------------------------------------------------~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 93 ------------------------------------------------------------NDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp ------------------------------------------------------------CTTEEEEEETTSEEEEEECC
T ss_pred ------------------------------------------------------------CCCEEEEEeCCCeEEEEEcc
Confidence 34455666666666666665
Q ss_pred Cc-------eeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEe--cccCccEEEEEEcCC--eEE
Q psy9182 263 SL-------QCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFSNG--MMV 328 (486)
Q Consensus 263 ~~-------~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~~--~l~ 328 (486)
++ +.+..+.+|...|.+++| ++ +++++++.||.|++||+++++.+..+ ..|...|.+++|+++ .++
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 55 567788899999999999 44 69999999999999999999999999 789999999999854 899
Q ss_pred EEeCCCcEEEEECCCCCceeeEEee-ecCccc-EEEEEe--CCCEEEEE---eCCCcEEEEECCCceE-EEEEc-CCccc
Q psy9182 329 TCSKDRSIAVWDMVSPNEITLRRVL-VGHRAA-VNVVDF--DEKYIVSA---SGDRTIKVWNTSSCEF-VRTLN-GHKRG 399 (486)
Q Consensus 329 ~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~-v~~~~~--~~~~l~~~---~~d~~i~iwd~~~~~~-~~~~~-~~~~~ 399 (486)
+++.||.|++||+++++.. ..+ ..|... +..+.| ++.++++| +.|+.|++||+++++. +.... .|...
T Consensus 193 ~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 269 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVV---AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG 269 (402)
T ss_dssp EEETTSEEEEEETTTTEEE---EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS
T ss_pred EEecCCcEEEEeCCCCcee---eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc
Confidence 9999999999999987654 333 456554 677777 77888888 7899999999998664 33333 46677
Q ss_pred EEEEEeC--CCEEE-EEeCCCcEEEEECCCCee-eEEecC--cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 400 IACLQYR--DRLVV-SGSSDNTIRLWDIECGAC-LRVLEG--HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 400 v~~~~~~--~~~l~-~~~~dg~v~iwd~~~~~~-~~~~~~--h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
+.++.++ +++|+ +|+.||.|++||+.+++. +..+.. |...|.+++| ++.+++ +.|+.+++|++.++
T Consensus 270 v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~--s~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 270 VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV--NKCEIARFYKLHER 343 (402)
T ss_dssp CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG--GGTEEEEEEEEETT
T ss_pred eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccce--ecceeEEEEEcCCC
Confidence 8888774 77776 555799999999998874 444444 4589999999 555555 46779999999864
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.2e-29 Score=242.02 Aligned_cols=325 Identities=13% Similarity=0.103 Sum_probs=223.6
Q ss_pred ccccccCCccCcceEEEeecCceeeeccccccc---ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~---~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
..+.++.++++|++|+++ .++.|++||+.+|+ .+..+..+........+... -.+...+.....
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 71 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTA------------KEQQGQSSENEN 71 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccc------------hhhccccccccc
Confidence 457788899999966665 57899999999999 77777766542222222100 001111111111
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCc--cceEEEEeCCCEE-EEEecCCeEEE
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS--KGVYCLQYDDHKI-VSGLRDNTIKV 258 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~l-~~~~~dg~i~i 258 (486)
+..-+--. ... .... ..+ ...........+. ...+++++++++| ++|+.||.|++
T Consensus 72 ~~~~~~~~--~~~--~~~~--------------~~~----~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~i 129 (450)
T 2vdu_B 72 ENKKLKSN--KGD--SIKR--------------TAA----KVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLV 129 (450)
T ss_dssp --------------------------------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred cccccccC--cCc--cccc--------------cCc----cccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEE
Confidence 11100000 000 0000 000 0000000111223 3344566788886 88999999999
Q ss_pred EECC--CceeeEEEc--CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE----EecccCccEEEEEEcCC---
Q psy9182 259 WDRV--SLQCIKVLT--GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN----TLIHHCEAVLHLRFSNG--- 325 (486)
Q Consensus 259 ~d~~--~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~~~~~i~~~~~~~~--- 325 (486)
||+. +++.+..+. .|...|.+++| ++++|++|+.+|.|++|++.+++... .+..|...|.+++|+++
T Consensus 130 wd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 209 (450)
T 2vdu_B 130 FDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDG 209 (450)
T ss_dssp EEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTS
T ss_pred EECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCC
Confidence 9999 888888876 56788999999 78899999999999999998876543 67788999999999875
Q ss_pred --eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCC------
Q psy9182 326 --MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH------ 396 (486)
Q Consensus 326 --~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------ 396 (486)
++++++.|+.|++||+.+++... ....+|...|.++.| ++++|++++.|+.|++||+.+++++..+..+
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 287 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQCFIVD--KWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPY 287 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCTTCEE--EECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGG
T ss_pred CcEEEEEcCCCcEEEEECCCCceee--eeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhh
Confidence 89999999999999998876543 335689999999999 7999999999999999999999988888632
Q ss_pred -------------------cccEEEEEeC--CCEEEEEe-CCCcEEEEEC--CCC---eeeEEecCcccCeEEEEecCC-
Q psy9182 397 -------------------KRGIACLQYR--DRLVVSGS-SDNTIRLWDI--ECG---ACLRVLEGHEELVRCIRFDAK- 448 (486)
Q Consensus 397 -------------------~~~v~~~~~~--~~~l~~~~-~dg~v~iwd~--~~~---~~~~~~~~h~~~v~~~~~~~~- 448 (486)
...+..+.+. +++|++++ .|+.|++|++ .++ +.+..+..| ..|.+++|++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~ 366 (450)
T 2vdu_B 288 LNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE 366 (450)
T ss_dssp CCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE
T ss_pred hhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc
Confidence 3457777774 88999998 8999999999 666 777888888 88999999444
Q ss_pred EEEEEeC-------CCcEEEEeCCCC
Q psy9182 449 RIVSGAY-------DGKIKVWNLVAA 467 (486)
Q Consensus 449 ~l~s~~~-------dg~v~iwdl~~~ 467 (486)
.+++.+. +..|.+|.+...
T Consensus 367 ~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 367 FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEEEecccCCCCCCcceEEEEEEcC
Confidence 4444433 456899987643
No 96
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=8e-29 Score=234.43 Aligned_cols=233 Identities=15% Similarity=0.212 Sum_probs=204.2
Q ss_pred CccceEEEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE
Q psy9182 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN 308 (486)
Q Consensus 233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~ 308 (486)
.....++++++++++++++.||.|++||+.+++ .+..+.+|...|.+++| +++++++++.||.|++||+++++...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 445556777899999999999999999999987 88899999999999999 68999999999999999999887554
Q ss_pred Ee--cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeE-EeeecCcccEEEEEe--CCCEEEEEeCCCcEEE
Q psy9182 309 TL--IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLR-RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV 381 (486)
Q Consensus 309 ~~--~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i 381 (486)
.+ ..|...+.++.|+++ .+++++.|+.|++||++........ ....+|...|.++.| +++++++++.|+.|++
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 43 668889999999864 8999999999999999987753332 333578899999999 7889999999999999
Q ss_pred EEC------------------CCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182 382 WNT------------------SSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441 (486)
Q Consensus 382 wd~------------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~ 441 (486)
||+ ..++.+..+..|...+.++.+ ++++|++++.||.|++||+++++++..+..|..+|.
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 248 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 248 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEE
T ss_pred EEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeE
Confidence 995 467889999999999999999 478999999999999999999999999999999999
Q ss_pred EEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 442 CIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 442 ~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
+++| ++.+|+++ .||.|++|++..
T Consensus 249 ~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 249 AVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999 66666666 899999999987
No 97
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.9e-29 Score=240.26 Aligned_cols=228 Identities=13% Similarity=0.109 Sum_probs=171.1
Q ss_pred eEEEEeCCCEEEEEecCCeEEEEECCCceeeE-----EEcCCcccEEEEEe----------cCCEEEEEeCCCcEEEEEC
Q psy9182 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK-----VLTGHTGSVLCLQY----------DERVIISGSSDSTVRVWDV 301 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~v~~~~~----------~~~~l~~~~~dg~i~vwd~ 301 (486)
..++.+++.++++++.|++|++||..+++... .+.+|.+.|.+++| |+++|++|+.|++|++||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 34456677889999999999999998876543 35689999999998 5689999999999999999
Q ss_pred CCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeE----------------------EeeecC
Q psy9182 302 NTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLR----------------------RVLVGH 356 (486)
Q Consensus 302 ~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~----------------------~~~~~~ 356 (486)
+++..+..+..|...+.+++|+|+ ++++++.|+.|++||+++++..... ....+|
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 999888888889999999999874 7999999999999999876543211 112356
Q ss_pred cccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEE-------------------e---CCCEEE
Q psy9182 357 RAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-------------------Y---RDRLVV 411 (486)
Q Consensus 357 ~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~-------------------~---~~~~l~ 411 (486)
...+.++.| +++.+++++.|+++++||+..++....+..|...+..+. + ++.+++
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT 333 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence 677777776 789999999999999999998877776665554433221 1 234677
Q ss_pred EEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
+|+.||.|++||+.+++++..+.+|..+|.+++| ||++||+++.|| +.+|.+.
T Consensus 334 sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 334 AHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 8889999999999999999988899999999999 999999999766 6677654
No 98
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=5.2e-29 Score=223.51 Aligned_cols=260 Identities=15% Similarity=0.192 Sum_probs=185.2
Q ss_pred eEEEeecCceeeecccccc---cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182 118 YIVSASGDRTIKVWNTSSC---EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194 (486)
Q Consensus 118 ~l~tg~~dg~v~iWd~~~~---~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~ 194 (486)
.+++++. ..|++|+..++ ++++++..|..+|..+.+.+. ...|+... +=+
T Consensus 56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------------~~~~~~~~------~~~----- 108 (356)
T 2w18_A 56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPD---------------VYNLVCVA------LGN----- 108 (356)
T ss_dssp EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTT---------------CCSCEEEE------ECS-----
T ss_pred EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCc---------------ccceeeee------ecc-----
Confidence 5777766 49999999998 899999999999999998642 11111110 000
Q ss_pred ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC----CCEEEEEecCCeEEEEECCCceeeEEE
Q psy9182 195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD----DHKIVSGLRDNTIKVWDRVSLQCIKVL 270 (486)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~i~d~~~~~~~~~~ 270 (486)
........++++++ ++.+++++.+ +.+|++.
T Consensus 109 -----------------------------------~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~-------- 143 (356)
T 2w18_A 109 -----------------------------------LEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLT-------- 143 (356)
T ss_dssp -----------------------------------SSEEEEEEECC------CCEEEEEEEEE--EEEEEET--------
T ss_pred -----------------------------------ccccceEEEEECCCccccccEEEeCCCe--EEEEecC--------
Confidence 00122234456677 7778877644 6667532
Q ss_pred cCCcccEEEEEecCCEEEEEe--CCCcEEEEEC-CCCcEEEEecccCccEEEEEEcC-----CeEEEEeCCCcEEEEECC
Q psy9182 271 TGHTGSVLCLQYDERVIISGS--SDSTVRVWDV-NTGEMVNTLIHHCEAVLHLRFSN-----GMMVTCSKDRSIAVWDMV 342 (486)
Q Consensus 271 ~~~~~~v~~~~~~~~~l~~~~--~dg~i~vwd~-~~~~~~~~~~~~~~~i~~~~~~~-----~~l~~~~~dg~i~i~d~~ 342 (486)
+++++.+++ .|+.|++|++ .+++.+..+..|...+..++|++ ..+++++.|++|++||+.
T Consensus 144 ------------~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 144 ------------KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp ------------TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred ------------CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 233444432 5889999999 45788777777777776666654 589999999999999999
Q ss_pred CCCceeeEEeeecC---cccEEEEEe--CCCEE------------EEEeCCCcEEEEECCCceEEEEE-----cCCcccE
Q psy9182 343 SPNEITLRRVLVGH---RAAVNVVDF--DEKYI------------VSASGDRTIKVWNTSSCEFVRTL-----NGHKRGI 400 (486)
Q Consensus 343 ~~~~~~~~~~~~~~---~~~v~~~~~--~~~~l------------~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v 400 (486)
+++.+.. +.+| ...+.+++| ++.++ ++|+.|++|++||..+++.+..+ .+|...+
T Consensus 212 TGk~l~t---L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 212 TGQLLKK---MHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp TCCEEEE---EECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred CCcEEEE---EcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 9876543 3333 234554444 66655 67888999999999999988766 4777666
Q ss_pred EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE-EEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182 401 ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRF--DAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 401 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~-~~~~--~~~~l~s~~~dg~v~iwdl 464 (486)
.+..+++.++++|+.|++|+|||+.+++++.++.+|...+. +++| ||++|++|+.|++|+|||+
T Consensus 289 lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 289 LEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 66677789999999999999999999999999999987655 5889 8999999999999999996
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-29 Score=235.46 Aligned_cols=268 Identities=10% Similarity=0.107 Sum_probs=207.2
Q ss_pred cccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCccee
Q psy9182 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILI 187 (486)
Q Consensus 108 ~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~v 187 (486)
....+.+++.+|++|+.||+|++||+.+++.+..+. ...|.++.+++ + +++++.|++|++
T Consensus 40 ~~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~---------------~---~~s~s~D~~i~~ 99 (343)
T 3lrv_A 40 LNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP---------------A---IISRGPCNRLLL 99 (343)
T ss_dssp ECSSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC---------------S---EEEECSTTEEEE
T ss_pred hhhhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC---------------c---eEEecCCCeEEE
Confidence 344556789999999999999999999999888876 44666666653 2 888889999999
Q ss_pred eecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceee
Q psy9182 188 WDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCI 267 (486)
Q Consensus 188 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 267 (486)
|+. ++.+.+||..+++.+
T Consensus 100 w~~--------------------------------------------------------------~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 100 LYP--------------------------------------------------------------GNQITILDSKTNKVL 117 (343)
T ss_dssp EET--------------------------------------------------------------TTEEEEEETTTCCEE
T ss_pred EEc--------------------------------------------------------------cCceEEeecCCccee
Confidence 985 235778898888866
Q ss_pred EEEc-CCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCCcEEEEec-ccCccEEEEEEcCC--eEEEEeCCCcEEEE
Q psy9182 268 KVLT-GHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHLRFSNG--MMVTCSKDRSIAVW 339 (486)
Q Consensus 268 ~~~~-~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~--~l~~~~~dg~i~i~ 339 (486)
..+. +|...|.++++ +++++++++.||.|++||+++++...... .+...+.+++|+++ ++++|+.||.|++|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 6665 67788999988 56899999999999999999999877663 34557999999865 88999999999999
Q ss_pred ECCCCCceeeEEeeec-CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC---CcccE--EEEEe--CCCE
Q psy9182 340 DMVSPNEITLRRVLVG-HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGI--ACLQY--RDRL 409 (486)
Q Consensus 340 d~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v--~~~~~--~~~~ 409 (486)
|+++++... ..+.. |...|.++.| ++.+|++++ ++.|++||+++++.+..+.. |...+ .+++| ++++
T Consensus 198 d~~~~~~~~--~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 198 NLSSPDQAS--SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp ESSCTTSCC--EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred ECCCCCCCc--cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 999887541 23344 8999999999 788999999 45999999999877655443 33333 24666 4899
Q ss_pred EEEEeC-CCcEEEEECCCCeeeEEecCcccCeEEEEe-----cCCEEEEEeCCCcEEEEeC
Q psy9182 410 VVSGSS-DNTIRLWDIECGACLRVLEGHEELVRCIRF-----DAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 410 l~~~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-----~~~~l~s~~~dg~v~iwdl 464 (486)
|++++. |+.|++|++.++...... .++..+.| +...+++++.||.+.++-.
T Consensus 275 l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 999998 999999999765443333 44556666 3467888888888888754
No 100
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=6.6e-29 Score=239.06 Aligned_cols=248 Identities=22% Similarity=0.363 Sum_probs=195.8
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
.|...|.+++|+|+|++||+|+.||.|+|||+.+++.++.+.+|...+.++++
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--------------------------- 197 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--------------------------- 197 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---------------------------
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee---------------------------
Confidence 45567999999999999999999999999999999999999998887776655
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR 261 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~ 261 (486)
++..+++|+.|+.+++||.
T Consensus 198 -------------------------------------------------------------~~~~l~sgs~d~~i~~~d~ 216 (420)
T 4gga_A 198 -------------------------------------------------------------NSYILSSGSRSGHIHHHDV 216 (420)
T ss_dssp -------------------------------------------------------------ETTEEEEEETTSEEEEEET
T ss_pred -------------------------------------------------------------CCCEEEEEeCCCceeEeee
Confidence 3445677777778888876
Q ss_pred CC-ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc----EEEEecccCccEEEEEEcCC---eEEE--
Q psy9182 262 VS-LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE----MVNTLIHHCEAVLHLRFSNG---MMVT-- 329 (486)
Q Consensus 262 ~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~i~~~~~~~~---~l~~-- 329 (486)
.. ...+..+.+|...+.++.+ +++++++++.||.+++||..+++ .+.....|...|.+++|++. .+++
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~ 296 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 296 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEE
T ss_pred cccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEe
Confidence 65 3445677889999998888 78999999999999999998765 34566788899999999863 5555
Q ss_pred EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--CCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405 (486)
Q Consensus 330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 405 (486)
|+.|+.|++||+.+++... .... ...+.++.+ +++.+++++ .|+.|++||+.+++++..+.+|...|.+++|
T Consensus 297 gs~D~~I~iwd~~t~~~~~---~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~ 372 (420)
T 4gga_A 297 GTSDRHIRIWNVCSGACLS---AVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM 372 (420)
T ss_dssp CTTTCEEEEEETTTTEEEE---EEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred ecCCCEEEEEeCCccccce---eecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 3579999999999886543 2333 345666666 777777765 6899999999999999999999999999998
Q ss_pred C--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182 406 R--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441 (486)
Q Consensus 406 ~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~ 441 (486)
+ +.+|++|+.|++|+|||+....+....+.+...+.
T Consensus 373 spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 373 SPDGATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp CTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred cCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 4 88999999999999999987776666665554443
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.2e-28 Score=231.34 Aligned_cols=229 Identities=19% Similarity=0.349 Sum_probs=204.6
Q ss_pred ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC-CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q psy9182 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 312 (486)
.+.++++++..+++++.||.|++||..+++....+.. |...|.+++| ++++|++|+.||.|++||+.+++.+..+..
T Consensus 95 ~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 95 YLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp TCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC
Confidence 4556777788899999999999999999998887776 7889999999 788999999999999999999999999999
Q ss_pred cCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEE
Q psy9182 313 HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFV 390 (486)
Q Consensus 313 ~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~ 390 (486)
|...|.++.|+++.+++++.||.|++||++.... ....+.+|...|.++.| +++++++++.|+.|++||+++++.+
T Consensus 175 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 175 HQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANH--QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK 252 (401)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE
T ss_pred CCCceEEEEECCCEEEEEcCCCCEEEEecccCcc--eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc
Confidence 9999999999999999999999999999985443 23556789999999999 7889999999999999999999999
Q ss_pred EEEcCCcccEEEEEeC---CCEEEEEe--CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEe--CCCcEEE
Q psy9182 391 RTLNGHKRGIACLQYR---DRLVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA--YDGKIKV 461 (486)
Q Consensus 391 ~~~~~~~~~v~~~~~~---~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~--~dg~v~i 461 (486)
..+..|...|.++.++ ..++++++ .|+.|++||+.+++.+..+. +...|.+++| ++.+|++++ .||.|++
T Consensus 253 ~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v 331 (401)
T 4aez_A 253 FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSI 331 (401)
T ss_dssp EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEE
T ss_pred EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEE
Confidence 9999999999999995 36777765 79999999999999998886 5678999999 888898854 8999999
Q ss_pred EeCCCC
Q psy9182 462 WNLVAA 467 (486)
Q Consensus 462 wdl~~~ 467 (486)
||+.++
T Consensus 332 ~~~~~~ 337 (401)
T 4aez_A 332 WSYSSS 337 (401)
T ss_dssp EEEETT
T ss_pred EecCCc
Confidence 999864
No 102
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.3e-30 Score=244.62 Aligned_cols=231 Identities=13% Similarity=0.178 Sum_probs=191.0
Q ss_pred CccceEEEEeCCCEEEEEecCCeEEEEECCCc--eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc---
Q psy9182 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL--QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE--- 305 (486)
Q Consensus 233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~--- 305 (486)
.....+++++++++|++|+.||.|++||+.++ +.+..+.+|...|.+++| ++++|++++.||.|++||+.+++
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 44556778889999999999999999999988 788889999999999999 67899999999999999999877
Q ss_pred EEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeec-CcccEEEEEe--CCCEEEEEeCCCcEE
Q psy9182 306 MVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVG-HRAAVNVVDF--DEKYIVSASGDRTIK 380 (486)
Q Consensus 306 ~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~~i~ 380 (486)
....+..|...|.+++|+++ .+++++.|+.|++||++.++.......+.. |...|.++.| ++++|++++.|+.|+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence 67778889999999999864 899999999999999998764333355556 9999999999 788999999999999
Q ss_pred EEECC------------------CceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCee----eEEecCc
Q psy9182 381 VWNTS------------------SCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVLEGH 436 (486)
Q Consensus 381 iwd~~------------------~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~h 436 (486)
+||+. .++++..+ +|...|.++.|+ +++|++++.||.|++||+.+++. +..+.+|
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 250 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS 250 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS
T ss_pred EEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC
Confidence 99985 35566677 899999999984 78999999999999999999887 7888999
Q ss_pred ccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 437 EELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 437 ~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
...|.+++| ++++|++++.|+.+ +|+..
T Consensus 251 ~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 251 QLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 999999999 88888888766555 77765
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.1e-28 Score=232.15 Aligned_cols=247 Identities=19% Similarity=0.299 Sum_probs=202.5
Q ss_pred cccccccccCCccC---cceEEEeecCceeeeccccccc-ceeeecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182 102 MLQRDFISLLPNFD---EKYIVSASGDRTIKVWNTSSCE-FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177 (486)
Q Consensus 102 ~~~~~~~~~~~s~~---~~~l~tg~~dg~v~iWd~~~~~-~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~ 177 (486)
.|...+.++.++|+ +.+|++|+.||.|++||+.+++ .+..+.+|...|.++.|.+.
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-------------------- 122 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGG-------------------- 122 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESG--------------------
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccc--------------------
Confidence 46678999999998 6999999999999999999988 89999999999999988421
Q ss_pred cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK 257 (486)
Q Consensus 178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 257 (486)
.++++++++|++++.||.|+
T Consensus 123 ------------------------------------------------------------~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 123 ------------------------------------------------------------LGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp ------------------------------------------------------------GGCC-CCCEEEEEETTSCEE
T ss_pred ------------------------------------------------------------cccCCCccEEEEEeCCCeEE
Confidence 01245677888888899999
Q ss_pred EEECCCce-eeEEEcCCcc----cEEEEE----e--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--
Q psy9182 258 VWDRVSLQ-CIKVLTGHTG----SVLCLQ----Y--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-- 324 (486)
Q Consensus 258 i~d~~~~~-~~~~~~~~~~----~v~~~~----~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-- 324 (486)
+||+.+++ .+..+..|.+ .+.++. + +++++++++.||.|++||+++++.... ..+...+.++.|++
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKD 221 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSS
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCC
Confidence 99988876 6777766554 788887 3 789999999999999999999887544 56788999999986
Q ss_pred ---CeEEEEeCCCcEEEEECCCCCceeeEE--eeecCcccEEEEEe--CCC-EEEEEeCCCcEEEEECCCc---------
Q psy9182 325 ---GMMVTCSKDRSIAVWDMVSPNEITLRR--VLVGHRAAVNVVDF--DEK-YIVSASGDRTIKVWNTSSC--------- 387 (486)
Q Consensus 325 ---~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~iwd~~~~--------- 387 (486)
+.+++++.||.|++||+++++...... ...+|...|.++.| +++ ++++++.||.|++||++++
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 489999999999999998765443222 34589999999999 555 8999999999999998753
Q ss_pred ----------eEEEEEcCCcccEEEEEeC--CCEEE-EEeCCCcEEEEECCCCee
Q psy9182 388 ----------EFVRTLNGHKRGIACLQYR--DRLVV-SGSSDNTIRLWDIECGAC 429 (486)
Q Consensus 388 ----------~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~~~~~ 429 (486)
+.+..+.+|...|.++.|+ +++|+ +++.||.|++||+.+.+.
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 4677888999999999995 66777 899999999999987654
No 104
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.1e-27 Score=221.53 Aligned_cols=235 Identities=19% Similarity=0.342 Sum_probs=204.2
Q ss_pred CCccce--EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEE
Q psy9182 232 ENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMV 307 (486)
Q Consensus 232 ~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~ 307 (486)
+|...+ +++++++++|++++.||.|++||+.+++.+..+.+|...|.+++| ++++|++++.||.|++||+.+++.+
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 344444 455668999999999999999999999999999999999999999 6889999999999999999999998
Q ss_pred EEecccCccEEEEEEcCC--eEEEEeCC-----CcEEEEECCCCCceeeE--------EeeecCcc--cEEEEEe--CCC
Q psy9182 308 NTLIHHCEAVLHLRFSNG--MMVTCSKD-----RSIAVWDMVSPNEITLR--------RVLVGHRA--AVNVVDF--DEK 368 (486)
Q Consensus 308 ~~~~~~~~~i~~~~~~~~--~l~~~~~d-----g~i~i~d~~~~~~~~~~--------~~~~~~~~--~v~~~~~--~~~ 368 (486)
..+. +...+.++.|+++ .+++++.+ +.|++||+......... .....+.. .+.++.+ +++
T Consensus 110 ~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 110 ATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 8887 7889999999864 88899988 99999999876532111 22334444 7888888 788
Q ss_pred EEEEEeCCCcEEEEECCC-ceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182 369 YIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445 (486)
Q Consensus 369 ~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~ 445 (486)
++++++.||.|++||+++ ++.+..+..|...|.++.+ ++++|++++.||.|++||+++++.+..+. +...+.+++|
T Consensus 189 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~ 267 (369)
T 3zwl_B 189 YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVI 267 (369)
T ss_dssp EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEe
Confidence 999999999999999999 7889999999999999999 48899999999999999999999998887 7788999999
Q ss_pred --cCCEEEEEeCCC--------------cEEEEeCCCCC
Q psy9182 446 --DAKRIVSGAYDG--------------KIKVWNLVAAL 468 (486)
Q Consensus 446 --~~~~l~s~~~dg--------------~v~iwdl~~~~ 468 (486)
++.++++++.++ .+++||+.++.
T Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 268 TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp CSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 889999999988 89999988654
No 105
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=4.8e-28 Score=230.19 Aligned_cols=216 Identities=13% Similarity=0.175 Sum_probs=174.9
Q ss_pred CEEEEEecCCeEEEEECCCceeeEEEc--CCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEeccc---Ccc
Q psy9182 245 HKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHH---CEA 316 (486)
Q Consensus 245 ~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~ 316 (486)
++|++|+.||.|++||+.+++....+. +|...|.+++| +++++++++.||.|++||+++ ..+..+..+ ...
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~ 165 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYW 165 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCC
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCC
Confidence 567788888888888888777666665 69999999999 458999999999999999986 555555443 478
Q ss_pred EEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCC-EEEEEeCCCcEEEEECCC----c
Q psy9182 317 VLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK-YIVSASGDRTIKVWNTSS----C 387 (486)
Q Consensus 317 i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~iwd~~~----~ 387 (486)
+.+++|+++ .+++++.|+.|++||++ ++. ...+.+|...|.++.| +++ ++++++.|+.|++||+++ +
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~---~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 241 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGLD-GHE---IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN 241 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETT-SCE---EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEECC-CCE---EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc
Confidence 999999864 99999999999999994 332 3556789999999999 566 999999999999999987 6
Q ss_pred eEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcc-----------------cCeEEEEe--
Q psy9182 388 EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-----------------ELVRCIRF-- 445 (486)
Q Consensus 388 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-----------------~~v~~~~~-- 445 (486)
..+..+ +|...|.++.|+ +.+|++++.|+.|++||+++++.+..+.+|. ..+..++|
T Consensus 242 ~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~ 320 (383)
T 3ei3_B 242 SYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP 320 (383)
T ss_dssp CEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC
T ss_pred ceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecC
Confidence 666666 699999999984 5899999999999999999988777766543 23334555
Q ss_pred cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 446 DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 446 ~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
++++ +++.||.|++||+.++.
T Consensus 321 dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 321 DDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp CTTT--CTTCCCCEEEEETTTCC
T ss_pred Cccc--ccCCCCeEEEEecCCCc
Confidence 5555 77899999999998654
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=254.38 Aligned_cols=226 Identities=20% Similarity=0.357 Sum_probs=193.2
Q ss_pred eCCCEEEEEecCCeEEEEECC--CceeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCc--EEEEeccc
Q psy9182 242 YDDHKIVSGLRDNTIKVWDRV--SLQCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGE--MVNTLIHH 313 (486)
Q Consensus 242 ~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~ 313 (486)
++++++++|+.||.|++||+. +++....+.+|.+.|.+++| + ++++++|+.||.|++||+.+++ .+..+..|
T Consensus 19 ~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h 98 (753)
T 3jro_A 19 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH 98 (753)
T ss_dssp SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCC
Confidence 456678888888888888876 56777888999999999998 3 8899999999999999999887 67778889
Q ss_pred CccEEEEEEcC----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC---------------CCEEEEEe
Q psy9182 314 CEAVLHLRFSN----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---------------EKYIVSAS 374 (486)
Q Consensus 314 ~~~i~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~l~~~~ 374 (486)
...|.++.|++ +.+++|+.||.|++||++.+..... ....+|...|.++.+. +.++++|+
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~-~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs 177 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 177 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC-EEEECCSSCEEEEEECCCC---------CGGGCCEEEEE
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce-eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEE
Confidence 99999999985 3899999999999999988744322 3456789999999983 67999999
Q ss_pred CCCcEEEEECCCc----eEEEEEcCCcccEEEEEeC-----CCEEEEEeCCCcEEEEECCCCe-----eeEEecCcccCe
Q psy9182 375 GDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGA-----CLRVLEGHEELV 440 (486)
Q Consensus 375 ~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~h~~~v 440 (486)
.||.|++||++++ .....+.+|...|.++.++ +.++++|+.||.|++||+.+++ .+.....|...|
T Consensus 178 ~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v 257 (753)
T 3jro_A 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 257 (753)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCC
T ss_pred CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCce
Confidence 9999999999876 6677888999999999995 6789999999999999998864 333445688899
Q ss_pred EEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 441 RCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 441 ~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
++++| ++++|++++.||.|++||+....
T Consensus 258 ~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 258 WRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 99999 88899999999999999998643
No 107
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=2.4e-28 Score=237.20 Aligned_cols=233 Identities=10% Similarity=0.258 Sum_probs=189.4
Q ss_pred ccceEEEEeCCCEEEEEecCCeEEEEECCCce-----------eeEEEcCCc------------ccEEEEEe--cC--CE
Q psy9182 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-----------CIKVLTGHT------------GSVLCLQY--DE--RV 286 (486)
Q Consensus 234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~------------~~v~~~~~--~~--~~ 286 (486)
....+++++++++|++|+.||.|++||+.+++ ....+.+|. ..|.+++| ++ ..
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~ 109 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQ 109 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcce
Confidence 33445667789999999999999999998877 578888998 88999999 44 68
Q ss_pred EEEEeCCCcEEEEECCCCcEE---------------------------------------EE-ecccCccEEEEEEcCC-
Q psy9182 287 IISGSSDSTVRVWDVNTGEMV---------------------------------------NT-LIHHCEAVLHLRFSNG- 325 (486)
Q Consensus 287 l~~~~~dg~i~vwd~~~~~~~---------------------------------------~~-~~~~~~~i~~~~~~~~- 325 (486)
+++++.||.|++||+.+++.. .. ...|...|.+++|+++
T Consensus 110 l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 189 (447)
T 3dw8_B 110 FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY 189 (447)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS
T ss_pred EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCC
Confidence 999999999999999764432 12 3578899999999864
Q ss_pred -eEEEEeCCCcEEEEECCCCCceeeEE-----eeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCCceE----EEE
Q psy9182 326 -MMVTCSKDRSIAVWDMVSPNEITLRR-----VLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSSCEF----VRT 392 (486)
Q Consensus 326 -~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~~~~----~~~ 392 (486)
.+++| .|+.|++||++......... .+.+|...|.++.| ++ +++++++.||.|++||+++++. +..
T Consensus 190 ~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 268 (447)
T 3dw8_B 190 ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKL 268 (447)
T ss_dssp SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEE
T ss_pred CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeE
Confidence 77787 89999999998433221110 25578899999999 55 8999999999999999999887 788
Q ss_pred EcCCcc------------cEEEEEeC--CCEEEEEeCCCcEEEEECCC-CeeeEEecCcccC---------------eEE
Q psy9182 393 LNGHKR------------GIACLQYR--DRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEEL---------------VRC 442 (486)
Q Consensus 393 ~~~~~~------------~v~~~~~~--~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~h~~~---------------v~~ 442 (486)
+..|.. .|.++.|+ +++|++++. +.|++||+++ ++++..+.+|... +..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~ 347 (447)
T 3dw8_B 269 FEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFE 347 (447)
T ss_dssp ECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCC
T ss_pred eccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceE
Confidence 888876 89999995 789999998 9999999997 8888899888642 223
Q ss_pred EEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 443 IRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 443 ~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
++| ++++|++|+.||.|++||+.++.
T Consensus 348 ~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 348 CCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp EEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred EEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 778 88999999999999999998764
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.6e-26 Score=218.79 Aligned_cols=300 Identities=16% Similarity=0.133 Sum_probs=227.9
Q ss_pred cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCccee-ecCCCCCcceeeeccccc
Q psy9182 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI-VSSSHDDTILIWDFLNYS 194 (486)
Q Consensus 116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l-~s~s~dg~i~vWd~~~~~ 194 (486)
+.++++++.|+.|++||+.+++.+..+.+|. .+.+++|+ +++..+ ++++.|+.|++||+.++.
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s---------------~dg~~l~~~~~~d~~i~v~d~~~~~ 65 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVIS---------------PDGTKVYVANAHSNDVSIIDTATNN 65 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEEC---------------TTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEEC---------------CCCCEEEEECCCCCeEEEEECCCCe
Confidence 3478889999999999999999999998886 48899997 466555 677789999999985533
Q ss_pred ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCC
Q psy9182 195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGH 273 (486)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~ 273 (486)
. ...+.. ......+++++++++++++ ..++.|++||+.+++.+..+..+
T Consensus 66 ~----------------------------~~~~~~--~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~ 115 (391)
T 1l0q_A 66 V----------------------------IATVPA--GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG 115 (391)
T ss_dssp E----------------------------EEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred E----------------------------EEEEEC--CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC
Confidence 2 112221 1244456677889887654 46799999999999998888755
Q ss_pred cccEEEEEe--cCCEE-EEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECCCCCce
Q psy9182 274 TGSVLCLQY--DERVI-ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSPNEI 347 (486)
Q Consensus 274 ~~~v~~~~~--~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~~~~ 347 (486)
..+.++++ +++.+ ++++.++.|++||+.+++.+..+..+ ..+.++.|+++ .+ ++++.++.|++||+++++..
T Consensus 116 -~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 116 -KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred -CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 46788888 67766 67888999999999999988888765 45688999864 45 67778899999999887544
Q ss_pred eeEEeeecCcccEEEEEe--CCCEEEEEe---CCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEE-EEEeCCCcE
Q psy9182 348 TLRRVLVGHRAAVNVVDF--DEKYIVSAS---GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV-VSGSSDNTI 419 (486)
Q Consensus 348 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~dg~v 419 (486)
.. . .+...+.++.+ +++++++++ .++.|++||+.+++.+..+..|.. +.++.++ ++++ ++++.|+.|
T Consensus 194 ~~---~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v 268 (391)
T 1l0q_A 194 DT---V-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTV 268 (391)
T ss_dssp EE---E-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEE
T ss_pred EE---E-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEE
Confidence 22 2 24556777777 788888887 689999999999999988887654 6677774 7766 677889999
Q ss_pred EEEECCCCeeeEEecCcccCeE-----------------EEEecC----------CEEEEEeCCCcEEEEeCCCCC
Q psy9182 420 RLWDIECGACLRVLEGHEELVR-----------------CIRFDA----------KRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 420 ~iwd~~~~~~~~~~~~h~~~v~-----------------~~~~~~----------~~l~s~~~dg~v~iwdl~~~~ 468 (486)
++||+.+++.+..+..|..+.. ....+. -.+...+.|..+++||+..+.
T Consensus 269 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 269 SVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS 344 (391)
T ss_dssp EEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC
T ss_pred EEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCc
Confidence 9999999999988876654321 111111 236666778999999997654
No 109
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=2.9e-27 Score=218.65 Aligned_cols=235 Identities=22% Similarity=0.372 Sum_probs=191.0
Q ss_pred cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182 102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181 (486)
Q Consensus 102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~ 181 (486)
.|...|.++.++|++++|++|+.||+|++||+.+++.+..+.+|...+.++.+
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--------------------------- 117 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--------------------------- 117 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---------------------------
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec---------------------------
Confidence 45667899999999999999999999999999999999888888776655443
Q ss_pred CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182 182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR 261 (486)
Q Consensus 182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~ 261 (486)
++..+++++.++.+++|+.
T Consensus 118 -------------------------------------------------------------~~~~l~s~~~~~~~~~~~~ 136 (318)
T 4ggc_A 118 -------------------------------------------------------------NSYILSSGSRSGHIHHHDV 136 (318)
T ss_dssp -------------------------------------------------------------ETTEEEEEETTSEEEEEET
T ss_pred -------------------------------------------------------------CCCEEEEEecCCceEeeec
Confidence 4456777888888888887
Q ss_pred CCc-eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE----EEEecccCccEEEEEEcCC-----eEEE
Q psy9182 262 VSL-QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM----VNTLIHHCEAVLHLRFSNG-----MMVT 329 (486)
Q Consensus 262 ~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~i~~~~~~~~-----~l~~ 329 (486)
... ..+..+.+|...+.++.+ +++++++++.||.|++||+++++. ......+...|.++.+.+. .+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 664 445677889999988888 789999999999999999987653 3445667788999998753 3346
Q ss_pred EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--CCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182 330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405 (486)
Q Consensus 330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 405 (486)
++.++.|++||........ ...+...+..+.+ +++.+++++ .|+.|++||+++++++..+.+|...|++++|
T Consensus 217 ~~~~~~i~lwd~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~ 292 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGACLS----AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM 292 (318)
T ss_dssp CTTTCEEEEEETTTCCEEE----EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred cCCCCEEEEEecccccccc----cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 6788999999998876542 2235556666666 667766654 7999999999999999999999999999999
Q ss_pred C--CCEEEEEeCCCcEEEEECCCCe
Q psy9182 406 R--DRLVVSGSSDNTIRLWDIECGA 428 (486)
Q Consensus 406 ~--~~~l~~~~~dg~v~iwd~~~~~ 428 (486)
+ +++|++|+.||+|+|||+....
T Consensus 293 spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 293 SPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CTTSSCEEEEETTTEEEEECCSCCC
T ss_pred cCCCCEEEEEecCCeEEEEECCCCC
Confidence 5 8899999999999999997653
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=3.3e-27 Score=220.66 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=195.3
Q ss_pred CCccce--EEEEeCCCEEEEEecCCeEEEEECCCce---eeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEEC-C
Q psy9182 232 ENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRVSLQ---CIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDV-N 302 (486)
Q Consensus 232 ~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~-~ 302 (486)
.|...+ +++++++++|++++.||.|++||+.+++ ....+.+|...|.+++| +++ ++++|+.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 344444 4566789999999999999999998776 34555689999999998 788 9999999999999999 8
Q ss_pred CCcEEEEecc--cCccEEEEEEc-CCeEEEEeCCCcEEEEECCC---------CCceeeEEeeecCcccEEEEEeCCCEE
Q psy9182 303 TGEMVNTLIH--HCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVS---------PNEITLRRVLVGHRAAVNVVDFDEKYI 370 (486)
Q Consensus 303 ~~~~~~~~~~--~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~l 370 (486)
+++. ..+.. |...|.+++|+ ++.+++++.|+.|++||+++ .+... .+ .|...+.++.+.+..+
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~-~~~~~v~~~~~~~~~l 163 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN---NT-KVKNKIFTMDTNSSRL 163 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS---SS-SSCCCEEEEEECSSEE
T ss_pred CCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeee---EE-eeCCceEEEEecCCcE
Confidence 7765 67777 99999999998 57999999999999999986 44332 22 2788999999977779
Q ss_pred EEEeCCCcEEEEECCC-ce--EEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCC------eeeEEecCccc
Q psy9182 371 VSASGDRTIKVWNTSS-CE--FVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECG------ACLRVLEGHEE 438 (486)
Q Consensus 371 ~~~~~d~~i~iwd~~~-~~--~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~------~~~~~~~~h~~ 438 (486)
++++.|+.|++||+++ +. .......|...+.++.++ ++++++++.||.|++|+++.. +....+..|..
T Consensus 164 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred EEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence 9999999999999998 54 334555788889998884 689999999999999999887 78888888865
Q ss_pred ---------CeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 439 ---------LVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 439 ---------~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
.|.+++| ++++|++++.||.|++||+.++.
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 9999999 78999999999999999998654
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-28 Score=251.34 Aligned_cols=242 Identities=20% Similarity=0.301 Sum_probs=202.3
Q ss_pred ccccccccccCCccCcceEEEeecCceeeecccc--cccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182 101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTS--SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~--~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
..|...|.++.++|++++|++|+.||.|+|||+. +++.+..+.+|...|.+++|++ +
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~---------------~------ 64 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH---------------P------ 64 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC---------------T------
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC---------------C------
Confidence 4678899999999999999999999999999998 6678889999999999998852 0
Q ss_pred CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182 179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV 258 (486)
Q Consensus 179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 258 (486)
.+++++++|+.||.|++
T Consensus 65 ---------------------------------------------------------------~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 65 ---------------------------------------------------------------KFGTILASCSYDGKVLI 81 (753)
T ss_dssp ---------------------------------------------------------------TSCSEEEEEETTSCEEE
T ss_pred ---------------------------------------------------------------CCCCEEEEEeCCCeEEE
Confidence 02566777888888888
Q ss_pred EECCCce--eeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCc--EEEEecccCccEEEEEEcC------
Q psy9182 259 WDRVSLQ--CIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGE--MVNTLIHHCEAVLHLRFSN------ 324 (486)
Q Consensus 259 ~d~~~~~--~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~~~------ 324 (486)
||+.+++ .+..+.+|...|.++.| + ++.+++|+.||.|++||++++. ....+..|...|.++.|++
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 8877776 66778889999999999 4 7899999999999999998773 3455678889999999976
Q ss_pred ---------CeEEEEeCCCcEEEEECCCCCce-eeEEeeecCcccEEEEEe--C---CCEEEEEeCCCcEEEEECCCce-
Q psy9182 325 ---------GMMVTCSKDRSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF--D---EKYIVSASGDRTIKVWNTSSCE- 388 (486)
Q Consensus 325 ---------~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~--~---~~~l~~~~~d~~i~iwd~~~~~- 388 (486)
..+++|+.||.|++||++++... .....+.+|...|.++.| + ++++++++.||.|++||+.+++
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence 48999999999999999887543 344567789999999999 4 7899999999999999998864
Q ss_pred ----EEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC
Q psy9182 389 ----FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC 426 (486)
Q Consensus 389 ----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~ 426 (486)
.......|...+.++.| +++++++|+.||.|++||+.+
T Consensus 242 ~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 33334568888888888 488999999999999999974
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=2.2e-27 Score=229.05 Aligned_cols=234 Identities=20% Similarity=0.357 Sum_probs=198.0
Q ss_pred ccceEEEEeC-CCEEEEEecCCeEEEEECCC----------ceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEE
Q psy9182 234 SKGVYCLQYD-DHKIVSGLRDNTIKVWDRVS----------LQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVW 299 (486)
Q Consensus 234 ~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vw 299 (486)
....++++++ +.++++++.+|.|++||+.+ .+.+..+.+|...|.+++| ++. +|++|+.||.|++|
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 209 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLW 209 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEE
Confidence 3444556665 67899999999999999876 6778889999999999999 445 99999999999999
Q ss_pred ECCCCcE-------EEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC
Q psy9182 300 DVNTGEM-------VNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE 367 (486)
Q Consensus 300 d~~~~~~-------~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 367 (486)
|+.++.. ...+..|...|.+++|++ ..+++++.||.|++||+++............|...|.++.| ++
T Consensus 210 d~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 289 (430)
T 2xyi_A 210 DINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 289 (430)
T ss_dssp ETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC
T ss_pred eCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC
Confidence 9987422 355678899999999986 38899999999999999987433333455688999999999 45
Q ss_pred C-EEEEEeCCCcEEEEECCC-ceEEEEEcCCcccEEEEEeC--C-CEEEEEeCCCcEEEEECCC--------------Ce
Q psy9182 368 K-YIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIEC--------------GA 428 (486)
Q Consensus 368 ~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~v~iwd~~~--------------~~ 428 (486)
. ++++|+.||.|++||+++ ..++..+..|...|.++.|+ + .+|++++.||.|++||+.. .+
T Consensus 290 ~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 369 (430)
T 2xyi_A 290 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 369 (430)
T ss_dssp TTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTT
T ss_pred CCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcc
Confidence 4 799999999999999998 56788999999999999995 4 5799999999999999986 36
Q ss_pred eeEEecCcccCeEEEEe--cCC-EEEEEeCCCcEEEEeCCCC
Q psy9182 429 CLRVLEGHEELVRCIRF--DAK-RIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 429 ~~~~~~~h~~~v~~~~~--~~~-~l~s~~~dg~v~iwdl~~~ 467 (486)
.+..+.+|...|++++| ++. +|++++.||.|++|++...
T Consensus 370 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 370 LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred eEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 77888899999999999 566 8999999999999999764
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=2.4e-27 Score=228.73 Aligned_cols=246 Identities=22% Similarity=0.368 Sum_probs=195.8
Q ss_pred cccccccccccCCccC-cceEEEeecCceeeeccccc----------ccceeeecCcccceeEEEeecceeEecCCCCce
Q psy9182 100 KPMLQRDFISLLPNFD-EKYIVSASGDRTIKVWNTSS----------CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 168 (486)
Q Consensus 100 ~~~~~~~~~~~~~s~~-~~~l~tg~~dg~v~iWd~~~----------~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i 168 (486)
...|...+.++.++|+ +.+|++|+.||.|++||+.+ .+.+..+.+|...|.+++|++
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~------------ 191 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP------------ 191 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT------------
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC------------
Confidence 3457788999999997 78999999999999999987 567788888988888888863
Q ss_pred eccCcc-eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE
Q psy9182 169 RYRDEF-QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI 247 (486)
Q Consensus 169 ~~~~~~-~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 247 (486)
++. .|++++.||.|++||+......
T Consensus 192 ---~~~~~l~s~~~dg~i~vwd~~~~~~~--------------------------------------------------- 217 (430)
T 2xyi_A 192 ---NLNGYLLSASDDHTICLWDINATPKE--------------------------------------------------- 217 (430)
T ss_dssp ---TSTTEEEEECTTSCEEEEETTSCCBG---------------------------------------------------
T ss_pred ---CCCCeEEEEeCCCeEEEEeCCCCCCC---------------------------------------------------
Confidence 333 5666666666666665321000
Q ss_pred EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCC---cEEEEecccCccEEEEE
Q psy9182 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG---EMVNTLIHHCEAVLHLR 321 (486)
Q Consensus 248 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~i~~~~ 321 (486)
... ......+.+|...|.+++| ++.++++++.||.|++||++++ +.+..+..|...|.+++
T Consensus 218 -----~~~--------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 218 -----HRV--------IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp -----GGE--------EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred -----Cce--------eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 000 0113456689999999999 4679999999999999999987 56777788999999999
Q ss_pred EcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCC---------
Q psy9182 322 FSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSS--------- 386 (486)
Q Consensus 322 ~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~--------- 386 (486)
|+++ .+++|+.||.|++||++..... ...+..|...|.++.| ++ .++++++.|+.|++||+..
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~--~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 362 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 362 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSC--SEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCC--eEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc
Confidence 9863 6889999999999999985432 2556678999999999 45 5799999999999999987
Q ss_pred -----ceEEEEEcCCcccEEEEEeC--CC-EEEEEeCCCcEEEEECCC
Q psy9182 387 -----CEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIEC 426 (486)
Q Consensus 387 -----~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~ 426 (486)
.+.+..+.+|...|.++.|+ +. ++++++.||.|+||++..
T Consensus 363 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 363 AEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 36778888999999999996 55 899999999999999864
No 114
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.9e-26 Score=221.64 Aligned_cols=268 Identities=13% Similarity=0.090 Sum_probs=214.7
Q ss_pred ccccccCCccCcceEEEeecCceeeeccccccccee-----eecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVR-----TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS 179 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~-----~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~ 179 (486)
..+.++.++|++.++++++.++.|++||+.+++.+. .+.+|...|.+++|+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~------------------------ 178 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP------------------------ 178 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG------------------------
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc------------------------
Confidence 346688889988889999999999999999988776 344666666666653
Q ss_pred CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182 180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW 259 (486)
Q Consensus 180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~ 259 (486)
+++..+++++.|+.|++|
T Consensus 179 --------------------------------------------------------------~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 179 --------------------------------------------------------------EHNELWVSQMQANAVHVF 196 (433)
T ss_dssp --------------------------------------------------------------GGTEEEEEEGGGTEEEEE
T ss_pred --------------------------------------------------------------CCCEEEEEECCCCEEEEE
Confidence 355667888888999999
Q ss_pred ECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEe---
Q psy9182 260 DRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCS--- 331 (486)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~--- 331 (486)
|+.+++.+..+..|...+.++++ +++.++ +++.|+.|++||+++++.+..+..+ ..+.+++++++ .+++++
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~ 275 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSA 275 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEES
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCC
Confidence 99988888888888889999988 577775 5557999999999999988887664 45889999854 777777
Q ss_pred -----CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCE-EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182 332 -----KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403 (486)
Q Consensus 332 -----~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 403 (486)
.|+.|++||+.+++..... .+...+..+.+ +++. +++++.++.|++||+.+++.+..+. +...+.++
T Consensus 276 ~~~~~~dg~i~~~d~~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~ 350 (433)
T 3bws_A 276 SNQESGGGRLGIYSMDKEKLIDTI----GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTI 350 (433)
T ss_dssp CTTCSCCEEEEEEETTTTEEEEEE----EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEE
T ss_pred CccccCCCeEEEEECCCCcEEeec----cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeE
Confidence 5889999999887544322 34456777777 6654 5666889999999999999888876 66778888
Q ss_pred EeC--CCEEEEEeC---------------CCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC-CCcEEEEe
Q psy9182 404 QYR--DRLVVSGSS---------------DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY-DGKIKVWN 463 (486)
Q Consensus 404 ~~~--~~~l~~~~~---------------dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~-dg~v~iwd 463 (486)
.++ ++++++++. ||.|++||+.+++.+..+..+ ..+.+++| ++++|++++. |+.|++|+
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 885 778888876 579999999999999888764 57899999 8889988875 99999999
Q ss_pred CC
Q psy9182 464 LV 465 (486)
Q Consensus 464 l~ 465 (486)
++
T Consensus 430 ~~ 431 (433)
T 3bws_A 430 RD 431 (433)
T ss_dssp ET
T ss_pred ec
Confidence 86
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.5e-26 Score=217.10 Aligned_cols=227 Identities=16% Similarity=0.186 Sum_probs=181.4
Q ss_pred CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEE-EEEeCCCcEEEEECCCCcEEEEec
Q psy9182 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVI-ISGSSDSTVRVWDVNTGEMVNTLI 311 (486)
Q Consensus 233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~ 311 (486)
.....+++++++++|++|+.+| +++||..+++.......+...+.++.++++.+ ++++.|+.|++||..+++.+..+.
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~ 98 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK 98 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE
Confidence 3445566778999999988775 78999998887766554444445555566666 567888999999999999998886
Q ss_pred ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCC-CceeeEEeeecCcccEEEEEeCCCEEEE--EeCCCcEEEEECCCce
Q psy9182 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSP-NEITLRRVLVGHRAAVNVVDFDEKYIVS--ASGDRTIKVWNTSSCE 388 (486)
Q Consensus 312 ~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~~--~~~d~~i~iwd~~~~~ 388 (486)
+...|.++.++++.++++. ++.|++||+.+. +.+..... ...+.++.+ .+++. |+.||.|++||+.+++
T Consensus 99 -~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~ 170 (355)
T 3vu4_A 99 -VDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSG 170 (355)
T ss_dssp -CSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEEESSCTTCEEEEECCC--
T ss_pred -CCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCC
Confidence 4668999999998777765 789999999987 44432221 233344443 66666 5789999999999865
Q ss_pred ----------------EEEEEcCCcccEEEEEeC--CCEEEEEeCCCc-EEEEECCCCeeeEEec-C-cccCeEEEEe--
Q psy9182 389 ----------------FVRTLNGHKRGIACLQYR--DRLVVSGSSDNT-IRLWDIECGACLRVLE-G-HEELVRCIRF-- 445 (486)
Q Consensus 389 ----------------~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~-v~iwd~~~~~~~~~~~-~-h~~~v~~~~~-- 445 (486)
.+..+.+|...|.+++|+ +++|++|+.||+ |++||+++++++..+. + |...|.+++|
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~ 250 (355)
T 3vu4_A 171 SATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWST 250 (355)
T ss_dssp ----------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECT
T ss_pred ccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECC
Confidence 278899999999999994 899999999998 9999999999999998 5 9999999999
Q ss_pred cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 446 DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 446 ~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
++++|++++.|++|++||+....
T Consensus 251 ~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 251 DGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEECCCEEEEEEccCCC
Confidence 88999999999999999998653
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-26 Score=222.74 Aligned_cols=231 Identities=19% Similarity=0.227 Sum_probs=193.5
Q ss_pred CccceEEEEeCCCEEEEEecCCeEEEEECCCce---eeEEEcC-------------------------------------
Q psy9182 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ---CIKVLTG------------------------------------- 272 (486)
Q Consensus 233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~------------------------------------- 272 (486)
++...++++++|++++++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 445566788899966555 68899999999888 5555543
Q ss_pred -----------------CcccEEEEEe--cCCEE-EEEeCCCcEEEEECC--CCcEEEEec--ccCccEEEEEEcCC--e
Q psy9182 273 -----------------HTGSVLCLQY--DERVI-ISGSSDSTVRVWDVN--TGEMVNTLI--HHCEAVLHLRFSNG--M 326 (486)
Q Consensus 273 -----------------~~~~v~~~~~--~~~~l-~~~~~dg~i~vwd~~--~~~~~~~~~--~~~~~i~~~~~~~~--~ 326 (486)
|.+.|.+++| ++++| ++++.||.|++||+. +++.+..+. .+...|.+++|+++ .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 2336899988 77885 889999999999999 888888776 56688999999864 8
Q ss_pred EEEEeCCCcEEEEECCCCCcee-eEEeeecCcccEEEEEe--C---CCEEEEEeCCCcEEEEECCCceEEEE-EcCCccc
Q psy9182 327 MVTCSKDRSIAVWDMVSPNEIT-LRRVLVGHRAAVNVVDF--D---EKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRG 399 (486)
Q Consensus 327 l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~v~~~~~--~---~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~ 399 (486)
+++++.+|.|++|++.++.... ....+.+|...|.++.| + +++|++++.|+.|++||+++++.+.. +.+|...
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 9999999999999998876543 33356678999999998 6 77999999999999999999988877 5589999
Q ss_pred EEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEecCc-------------------------ccCeEEEEe--cCCEEE
Q psy9182 400 IACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGH-------------------------EELVRCIRF--DAKRIV 451 (486)
Q Consensus 400 v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-------------------------~~~v~~~~~--~~~~l~ 451 (486)
|.++.| ++++|++++.|+.|++||+++++++..+..+ ...|.+++| ++++|+
T Consensus 244 v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 323 (450)
T 2vdu_B 244 VSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVA 323 (450)
T ss_dssp EEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEE
T ss_pred eEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEE
Confidence 999999 5999999999999999999999998888633 356889999 788999
Q ss_pred EEe-CCCcEEEEeC
Q psy9182 452 SGA-YDGKIKVWNL 464 (486)
Q Consensus 452 s~~-~dg~v~iwdl 464 (486)
+++ .|+.|++|++
T Consensus 324 ~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 324 FFVEATKCIIILEM 337 (450)
T ss_dssp EEETTCSEEEEEEE
T ss_pred EEECCCCeEEEEEe
Confidence 998 8999999999
No 117
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=8.7e-27 Score=225.27 Aligned_cols=221 Identities=17% Similarity=0.177 Sum_probs=168.0
Q ss_pred CCEEEEEecCCeEEEEECCCceee--EEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecc--cCcc
Q psy9182 244 DHKIVSGLRDNTIKVWDRVSLQCI--KVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIH--HCEA 316 (486)
Q Consensus 244 ~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~ 316 (486)
+.+||+|+.||.|+|||+.+++.. ..+.+|.+.|.+++| ++++|++|+.||+|++||++++........ +...
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~ 211 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIW 211 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCcc
Confidence 445777777777777777665443 344579999999998 578999999999999999987655443333 3345
Q ss_pred EEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCCceEEE
Q psy9182 317 VLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSSCEFVR 391 (486)
Q Consensus 317 i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~~~~~~ 391 (486)
+.+++|+++ ++++|+.||.|++||++... + ..+.+|...|.++.| ++ .++++++.|+.|++||+++.+...
T Consensus 212 ~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~---~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~ 287 (435)
T 4e54_B 212 FCSLDVSASSRMVVTGDNVGNVILLNMDGKE-L---WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA 287 (435)
T ss_dssp CCCEEEETTTTEEEEECSSSBEEEEESSSCB-C---CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred EEEEEECCCCCEEEEEeCCCcEeeeccCcce-e---EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc
Confidence 678888754 89999999999999997542 2 456689999999999 33 488899999999999998876544
Q ss_pred E---EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccC------eEEEEe--cCCEEEEEe----
Q psy9182 392 T---LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL------VRCIRF--DAKRIVSGA---- 454 (486)
Q Consensus 392 ~---~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~------v~~~~~--~~~~l~s~~---- 454 (486)
. ..+|...|.+++|+ +.+|++++.||.|+|||+.+++....+..|... +....| ++..+++++
T Consensus 288 ~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 367 (435)
T 4e54_B 288 SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDP 367 (435)
T ss_dssp CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCT
T ss_pred eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCC
Confidence 3 35789999999884 889999999999999999999888887766431 222333 444555543
Q ss_pred --------CCCcEEEEeCCCCC
Q psy9182 455 --------YDGKIKVWNLVAAL 468 (486)
Q Consensus 455 --------~dg~v~iwdl~~~~ 468 (486)
.++.|++||+.++.
T Consensus 368 ~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 368 NFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp TSCCSSTTCCCCEEEECSSSCC
T ss_pred CeEEEEecCCCEEEEEECCCCc
Confidence 34679999998764
No 118
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=4.5e-27 Score=224.96 Aligned_cols=240 Identities=22% Similarity=0.312 Sum_probs=195.2
Q ss_pred ccccccccccCCcc-CcceEEEeecCceeeecccccc-------cceeeecCcccceeEEEeecceeEecCCCCceeccC
Q psy9182 101 PMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSSC-------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172 (486)
Q Consensus 101 ~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~~-------~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~ 172 (486)
..|...|.++.++| ++.+|++|+.||.|+|||+.++ +.+..+.+|...|.+++|+
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----------------- 140 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWH----------------- 140 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEEC-----------------
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEEC-----------------
Confidence 35678899999999 9999999999999999999988 5677888898888888875
Q ss_pred cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC-CEEEEEe
Q psy9182 173 EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD-HKIVSGL 251 (486)
Q Consensus 173 ~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~ 251 (486)
+++ .++++++
T Consensus 141 ---------------------------------------------------------------------p~~~~~l~s~~ 151 (402)
T 2aq5_A 141 ---------------------------------------------------------------------PTAQNVLLSAG 151 (402)
T ss_dssp ---------------------------------------------------------------------SSBTTEEEEEE
T ss_pred ---------------------------------------------------------------------cCCCCEEEEEc
Confidence 233 5788899
Q ss_pred cCCeEEEEECCCceeeEEE--cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe-cccCcc-EEEEEEcCC
Q psy9182 252 RDNTIKVWDRVSLQCIKVL--TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEA-VLHLRFSNG 325 (486)
Q Consensus 252 ~dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~-i~~~~~~~~ 325 (486)
.||.|++||+.+++.+..+ .+|...|.+++| ++++|++++.||.|++||+++++.+..+ ..|... +.++.|+++
T Consensus 152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST
T ss_pred CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC
Confidence 9999999999999999998 789999999999 7889999999999999999999999888 677665 888999865
Q ss_pred --eEEEE---eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEE-EeCCCcEEEEECCCceE-EEEEcC-
Q psy9182 326 --MMVTC---SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVS-ASGDRTIKVWNTSSCEF-VRTLNG- 395 (486)
Q Consensus 326 --~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~-~~~d~~i~iwd~~~~~~-~~~~~~- 395 (486)
++++| +.|+.|++||+++.+.... .....+...+.++.+ +++++++ ++.|+.|++||+.+++. +..+..
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLS-LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSE-EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCce-EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 67777 6899999999988765222 222356677888887 7788865 55799999999998874 444443
Q ss_pred -CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCee
Q psy9182 396 -HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC 429 (486)
Q Consensus 396 -~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~ 429 (486)
|...+.++.|. +.+++ +.++.+++|++.+++.
T Consensus 311 ~~~~~v~~~~~sp~~~~~~--s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 311 SSKESQRGMGYMPKRGLEV--NKCEIARFYKLHERKC 345 (402)
T ss_dssp CCSSCCSEEEECCGGGSCG--GGTEEEEEEEEETTEE
T ss_pred ccCCcccceEEecccccce--ecceeEEEEEcCCCcE
Confidence 45888899886 44444 4677999999988754
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=221.86 Aligned_cols=254 Identities=16% Similarity=0.104 Sum_probs=195.0
Q ss_pred CcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCcee
Q psy9182 144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFL 223 (486)
Q Consensus 144 ~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (486)
.-...|.+++|+ +||.++++++.|++|+ |......
T Consensus 13 ~~~~~v~sv~~S---------------pDG~~iASas~D~TV~--d~~~~~~---------------------------- 47 (588)
T 2j04_A 13 EFEDWKNNLTWA---------------RDGTLYLTTFPDISIG--QPKYAKD---------------------------- 47 (588)
T ss_dssp CCSSSSCCEEEC---------------TTSCEEEECSSSEEEE--EECCCSC----------------------------
T ss_pred HhhccEEEEEEC---------------CCCCEEEEEcCCceee--cccccce----------------------------
Confidence 345689999998 7999999999999998 5322110
Q ss_pred EEEEeccCCCccceEE--EEeCCCEEEEEecCCeEEEEECCCceeeEEEc-CCcccEEEEEe--cCCEEEEEeCCCcEEE
Q psy9182 224 LQRINCRSENSKGVYC--LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQY--DERVIISGSSDSTVRV 298 (486)
Q Consensus 224 ~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~v 298 (486)
..+|...+.+ ++|+| .++. |++.+++....+. .|...|.+++| +|..|++++.||.|++
T Consensus 48 ------l~gh~~~v~~V~FsPdg-------~~~~---~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~i 111 (588)
T 2j04_A 48 ------INCNSKNLFHVKEFPLE-------FENK---LDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSV 111 (588)
T ss_dssp ------CSSBGGGTEEEEEECCC-------CCCT---TTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred ------ecCCCccEEEEEECCCC-------Ccce---EEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 1134444444 45555 3444 4444444333333 46788999999 8999999999999999
Q ss_pred EECCCCcEEEEecccCc-----cEEEEEEcCC--eEEEEeCCCcEEEEECCCCCce----eeEEee----ecCcccEEEE
Q psy9182 299 WDVNTGEMVNTLIHHCE-----AVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI----TLRRVL----VGHRAAVNVV 363 (486)
Q Consensus 299 wd~~~~~~~~~~~~~~~-----~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~----~~~~~~----~~~~~~v~~~ 363 (486)
||... ++..+. |.. .+.+++|+|+ ++++|+.||.|++||+.++... .....+ .+|...|.++
T Consensus 112 wd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sV 188 (588)
T 2j04_A 112 FKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHI 188 (588)
T ss_dssp EETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEE
T ss_pred EeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEE
Confidence 99654 666666 554 4999999975 9999999999999999887530 112333 6788899999
Q ss_pred Ee--CCCEEEEEeCCCcEEEEECCCceE---EEEE-cCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc
Q psy9182 364 DF--DEKYIVSASGDRTIKVWNTSSCEF---VRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 437 (486)
Q Consensus 364 ~~--~~~~l~~~~~d~~i~iwd~~~~~~---~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~ 437 (486)
+| +| +++++.|+.|++||+.+++. ..++ .+|...|.+++|.++.||+++ ++.|++||+.+++......+|.
T Consensus 189 awSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~ 265 (588)
T 2j04_A 189 VWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSL 265 (588)
T ss_dssp EEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCC
T ss_pred EEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCC
Confidence 99 44 88999999999999988773 3567 478889999999888999987 6999999999888755554899
Q ss_pred cCeEEEEe----cCCEEEEEeCCCcEEEEeCC
Q psy9182 438 ELVRCIRF----DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 438 ~~v~~~~~----~~~~l~s~~~dg~v~iwdl~ 465 (486)
..|.+++| ++..|++++.||+ ++|.++
T Consensus 266 ~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 266 ENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred ceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999999 5557999999999 999986
No 120
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=2.3e-26 Score=216.53 Aligned_cols=189 Identities=15% Similarity=0.186 Sum_probs=157.5
Q ss_pred ceEEEEeCCCEEEEEe--cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE--
Q psy9182 236 GVYCLQYDDHKIVSGL--RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT-- 309 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~-- 309 (486)
.+++++|||+++++++ .|++|+|||+.+++.+..+. |...|.+++| |++++++++.+ .+.+|+..+++.+..
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee
Confidence 4578899999877544 78999999999999998886 7788999998 78999998855 577777777776543
Q ss_pred ecccCccEEEEEEcCC--eEEEEeCCC----cEEEEECCCCCce-eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEE
Q psy9182 310 LIHHCEAVLHLRFSNG--MMVTCSKDR----SIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIK 380 (486)
Q Consensus 310 ~~~~~~~i~~~~~~~~--~l~~~~~dg----~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~ 380 (486)
...|...+.+++|+++ .+++++.|+ .++.||+...... .....+.+|...|++++| +|++|++|+.|++|+
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 3557888999999865 788888776 6888988765432 223456788999999998 899999999999999
Q ss_pred EEECCCceEEEEE-cCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC
Q psy9182 381 VWNTSSCEFVRTL-NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC 426 (486)
Q Consensus 381 iwd~~~~~~~~~~-~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~ 426 (486)
|||+++++++..+ .+|...|++++|+ +++|++|+.|++|+|||+..
T Consensus 295 iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 295 LVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999885 7899999999994 89999999999999999964
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-26 Score=216.61 Aligned_cols=221 Identities=12% Similarity=0.097 Sum_probs=178.1
Q ss_pred eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC---------CCcEEEEec-
Q psy9182 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN---------TGEMVNTLI- 311 (486)
Q Consensus 242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~---------~~~~~~~~~- 311 (486)
+++..+++|+.||.|++||+.+++.+..+. ...|.++.+... +++++.|++|++|+.. +++.+..+.
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 577889999999999999999998888776 455666667555 9999999999999665 555455443
Q ss_pred ccCccEEEEEEcC----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182 312 HHCEAVLHLRFSN----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385 (486)
Q Consensus 312 ~~~~~i~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~ 385 (486)
.|...|.++++++ +++++++.||.|++||+++++... .....+...+.++.| ++.++++|+.||.|++||++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~--~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI--VHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEE--EECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE--EEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 5667899999987 389999999999999999887632 222345557888888 78999999999999999999
Q ss_pred CceEE-EEEcC-CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeE--EEEe--cCCEEEEEe
Q psy9182 386 SCEFV-RTLNG-HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVR--CIRF--DAKRIVSGA 454 (486)
Q Consensus 386 ~~~~~-~~~~~-~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~--~~~~--~~~~l~s~~ 454 (486)
+++.+ ..+.. |...|.++.|+ +.+|++++ |+.|++||+++++.+..+.. |...+. +++| ++++|++++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 99887 88888 99999999995 78999999 55999999998877655543 434444 5888 789999999
Q ss_pred C-CCcEEEEeCCCCC
Q psy9182 455 Y-DGKIKVWNLVAAL 468 (486)
Q Consensus 455 ~-dg~v~iwdl~~~~ 468 (486)
. |+.|++|++....
T Consensus 280 ~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 280 NESNSLTIYKFDKKT 294 (343)
T ss_dssp TTTTEEEEEEECTTT
T ss_pred CCCCcEEEEEEcccc
Confidence 8 9999999997654
No 122
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=4.1e-25 Score=218.02 Aligned_cols=313 Identities=11% Similarity=0.096 Sum_probs=234.0
Q ss_pred ccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceee
Q psy9182 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIW 188 (486)
Q Consensus 109 ~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vW 188 (486)
+..++|++.++++++.|++|.+||..+++++.++..+.. +..++|+ +|++++++++.|++|.+|
T Consensus 142 ~~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~s---------------pdg~~l~v~~~d~~V~v~ 205 (543)
T 1nir_A 142 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMS---------------ASGRYLLVIGRDARIDMI 205 (543)
T ss_dssp CSCCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEEC---------------TTSCEEEEEETTSEEEEE
T ss_pred ccccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEEC---------------CCCCEEEEECCCCeEEEE
Confidence 445788999999999999999999999999999984433 7888887 688889999999999999
Q ss_pred ec--ccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe----CCCEEEEEec-CCeEEEEEC
Q psy9182 189 DF--LNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY----DDHKIVSGLR-DNTIKVWDR 261 (486)
Q Consensus 189 d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~-dg~i~i~d~ 261 (486)
|+ .+.. ....+. .+....-+++++ +++++++++. +++|.+||.
T Consensus 206 D~~~~t~~----------------------------~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 206 DLWAKEPT----------------------------KVAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp ETTSSSCE----------------------------EEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred ECcCCCCc----------------------------EEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence 98 3321 122222 123345567888 9999998884 899999999
Q ss_pred CCceeeEEEcCC----------cc-cEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEE--EecccCccEEEEEEcCC
Q psy9182 262 VSLQCIKVLTGH----------TG-SVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVN--TLIHHCEAVLHLRFSNG 325 (486)
Q Consensus 262 ~~~~~~~~~~~~----------~~-~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~i~~~~~~~~ 325 (486)
.++++++.+..+ .. .+.++.+ ++ .++++...++.|.+||..+++.+. .+. +...+..+.|+++
T Consensus 256 ~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spd 334 (543)
T 1nir_A 256 ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSS 334 (543)
T ss_dssp TTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTT
T ss_pred cccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCC
Confidence 999999888753 22 5777776 33 466777788999999998765433 332 4556778888865
Q ss_pred --eEEEE-eCCCcEEEEECCCCCceeeEEee-ecCcccEEEE-EeC-CCEEEEEe-CCCcEEEEECCC-------ceEEE
Q psy9182 326 --MMVTC-SKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVV-DFD-EKYIVSAS-GDRTIKVWNTSS-------CEFVR 391 (486)
Q Consensus 326 --~l~~~-~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~-~~~-~~~l~~~~-~d~~i~iwd~~~-------~~~~~ 391 (486)
+++++ ..++.|.+||+.+++........ ..|......+ ..+ +..++++. .|++|.+||+.+ +++++
T Consensus 335 g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~ 414 (543)
T 1nir_A 335 HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA 414 (543)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEE
Confidence 55544 56899999999988755433211 1254333333 334 55666665 579999999998 89999
Q ss_pred EEcCCcccEEEEEe--CCCEEEEEe-------CCCcEEEEECCCCeee-EEe--------cCcccCeEEEEe--cCCEEE
Q psy9182 392 TLNGHKRGIACLQY--RDRLVVSGS-------SDNTIRLWDIECGACL-RVL--------EGHEELVRCIRF--DAKRIV 451 (486)
Q Consensus 392 ~~~~~~~~v~~~~~--~~~~l~~~~-------~dg~v~iwd~~~~~~~-~~~--------~~h~~~v~~~~~--~~~~l~ 451 (486)
++..|...+..+.+ ++++|++++ .+++|.+||+.+++.. ..+ ..+...+..+.| +|+.|+
T Consensus 415 ~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 415 ELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp EEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred EEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence 99999877766666 588999987 2779999999998877 444 355678999999 899887
Q ss_pred EEe-----CCCcEEEEeCCCCC
Q psy9182 452 SGA-----YDGKIKVWNLVAAL 468 (486)
Q Consensus 452 s~~-----~dg~v~iwdl~~~~ 468 (486)
++. .|+.|.|||..+..
T Consensus 495 ~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 495 FSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp EEEECCTTSCCEEEEEETTTTE
T ss_pred EEeecCCCCCCeEEEEECCCce
Confidence 663 47999999998653
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=8.1e-24 Score=201.54 Aligned_cols=257 Identities=16% Similarity=0.185 Sum_probs=197.8
Q ss_pred ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE-EEEec
Q psy9182 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI-VSGLR 252 (486)
Q Consensus 174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~ 252 (486)
..+++++.|+.|++||+.+... ...+... .....++++++++++ ++++.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~----------------------------~~~~~~~--~~~~~~~~s~dg~~l~~~~~~ 52 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV----------------------------TATIPVG--SNPMGAVISPDGTKVYVANAH 52 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE----------------------------EEEEECS--SSEEEEEECTTSSEEEEEEGG
T ss_pred EEEEEcCCCCEEEEEECCCCeE----------------------------EEEeecC--CCcceEEECCCCCEEEEECCC
Confidence 3578889999999999855332 1222211 223455677788876 66778
Q ss_pred CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEE-EeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIIS-GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM 327 (486)
Q Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l 327 (486)
|+.|++||+.+++.+..+..+. .+.++++ +++++++ ++.++.|++||+.+++.+..+..+ ..+.+++|+++ .+
T Consensus 53 d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKL 130 (391)
T ss_dssp GTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEE
T ss_pred CCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEE
Confidence 9999999999999998888665 8888888 6777754 556799999999999988877654 46789999865 45
Q ss_pred -EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEE-EEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182 328 -VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI-VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403 (486)
Q Consensus 328 -~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 403 (486)
++++.++.|++||+.+++... ....+ ..+..+.+ +++++ ++++.++.|++||+++++.+..+.. ...+.++
T Consensus 131 ~~~~~~~~~v~~~d~~~~~~~~---~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~ 205 (391)
T 1l0q_A 131 YVTNNGDKTVSVINTVTKAVIN---TVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGI 205 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEE---EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEE
T ss_pred EEEeCCCCEEEEEECCCCcEEE---EEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccce
Confidence 678889999999998876543 23333 34567777 67777 5677889999999999988877764 4567777
Q ss_pred EeC--CCEEEEEe---CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEE-EEEeCCCcEEEEeCCCCC
Q psy9182 404 QYR--DRLVVSGS---SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI-VSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 404 ~~~--~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l-~s~~~dg~v~iwdl~~~~ 468 (486)
.++ ++++++++ .++.|++||+++++.+..+..|. .+.+++| ++++| ++++.|+.|++||+.++.
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 774 77888887 68999999999999999888765 4788888 67777 677889999999998653
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=9.1e-26 Score=214.89 Aligned_cols=241 Identities=12% Similarity=0.112 Sum_probs=165.4
Q ss_pred ccccccCCccCcceEEEeecCceeeecccccccc-----eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS 179 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~-----~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~ 179 (486)
.......+++++.+|++|+.|++|+|||..+++. +..+.+|.+.|.+++|++....
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~------------------- 150 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSA------------------- 150 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECT-------------------
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEcccccc-------------------
Confidence 3444556778889999999999999999988764 3457899999999999742100
Q ss_pred CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182 180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW 259 (486)
Q Consensus 180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~ 259 (486)
....++++|++|+.|++|+||
T Consensus 151 -----------------------------------------------------------~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 151 -----------------------------------------------------------DNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp -----------------------------------------------------------TCSEEEEEEEEEETTSEEEEE
T ss_pred -----------------------------------------------------------ccCCCCCEEEEEECCCeEEEE
Confidence 001356678888888888888
Q ss_pred ECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEe-------------------------c
Q psy9182 260 DRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTL-------------------------I 311 (486)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~-------------------------~ 311 (486)
|+.++..+..+..|...+.+++| ++ .+|++|+.||+|++||+++++..... .
T Consensus 172 d~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 172 RLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp EEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred ECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 88777777777778888888888 33 47888888888888888876543322 2
Q ss_pred ccCccEEEEEEc---CCeEEEEeCCCcEEEEECCCCCceeeEEe----------------eecCcccEEEEEe---CCCE
Q psy9182 312 HHCEAVLHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRV----------------LVGHRAAVNVVDF---DEKY 369 (486)
Q Consensus 312 ~~~~~i~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------~~~~~~~v~~~~~---~~~~ 369 (486)
.|...+.++.|. +..+++++.|+.+++||+..++....... ...+...+..+.+ ++.+
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred cccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 455667788875 34899999999999999987653321110 0111111112222 3446
Q ss_pred EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 424 (486)
Q Consensus 370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~ 424 (486)
+++|+.||.|++||+.+++....+..|...|.+++|+ |++||+++.+| +.+|.+
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 7788899999999999999988888999999999995 89999999776 555544
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=2.1e-24 Score=193.75 Aligned_cols=217 Identities=13% Similarity=0.129 Sum_probs=153.6
Q ss_pred hcccccccccccCCccC----cceEEEeecCceeeecccccccceee-ecCcccceeEEEeecceeEecCCCCceeccCc
Q psy9182 99 LKPMLQRDFISLLPNFD----EKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173 (486)
Q Consensus 99 ~~~~~~~~~~~~~~s~~----~~~l~tg~~dg~v~iWd~~~~~~~~~-l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~ 173 (486)
+...+.+.+.+++++|| ++++++++. .+++|++.+++++.+ ..+|...|..+++++ ++
T Consensus 106 ~~~~~~~~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~---------------dG 168 (356)
T 2w18_A 106 LGNLEIREIRALFCSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE---------------DG 168 (356)
T ss_dssp ECSSSEEEEEEECC------CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECT---------------TS
T ss_pred eccccccceEEEEECCCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECC---------------CC
Confidence 33455568888899999 888998774 477888877776655 355655555555431 11
Q ss_pred ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe---CCCEEEEE
Q psy9182 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY---DDHKIVSG 250 (486)
Q Consensus 174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~ 250 (486)
+.+ ..+. .+.....++++++ ++.+|++|
T Consensus 169 ~~~------------------------------------------------~s~~-~~~~~v~~l~fs~~~g~~~~LaSg 199 (356)
T 2w18_A 169 GGK------------------------------------------------ENQF-LMPPEETILTFAEVQGMQEALLGT 199 (356)
T ss_dssp CEE------------------------------------------------EEEE-ECCCSSCEEEEEEEETSTTEEEEE
T ss_pred cee------------------------------------------------eeec-cCCCceeeEEeeccCCCCceEEEe
Confidence 100 0111 2245566788888 77999999
Q ss_pred ecCCeEEEEECCCceeeEEEcCCcc---cEEEEEe--cCCEE------------EEEeCCCcEEEEECCCCcEEEEe---
Q psy9182 251 LRDNTIKVWDRVSLQCIKVLTGHTG---SVLCLQY--DERVI------------ISGSSDSTVRVWDVNTGEMVNTL--- 310 (486)
Q Consensus 251 ~~dg~i~i~d~~~~~~~~~~~~~~~---~v~~~~~--~~~~l------------~~~~~dg~i~vwd~~~~~~~~~~--- 310 (486)
+.|++|+|||+.++++++++.+|.. .+.+++| ++.++ ++|+.|++|++||..+++.+..+
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~ 279 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC 279 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee
Confidence 9999999999999999999987543 4555455 66665 66888999999999999987765
Q ss_pred --cccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEE-EEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182 311 --IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN-VVDF--DEKYIVSASGDRTIKVWNT 384 (486)
Q Consensus 311 --~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~~~~--~~~~l~~~~~d~~i~iwd~ 384 (486)
.+|...+.+..+++..+++++.|++|++||+.+++.. ..+.+|...+. +++| +|++|++|+.|++|++||+
T Consensus 280 ~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l---~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 280 LPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCT---ALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEE---EEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEE---EEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 3555566666777778999999999999999998765 45667766544 4566 8999999999999999995
No 126
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=2e-23 Score=195.06 Aligned_cols=201 Identities=18% Similarity=0.356 Sum_probs=171.3
Q ss_pred EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC----cEEEEecccCccEEEEEEcC----CeEEEEeCCCcEE
Q psy9182 268 KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG----EMVNTLIHHCEAVLHLRFSN----GMMVTCSKDRSIA 337 (486)
Q Consensus 268 ~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~~~----~~l~~~~~dg~i~ 337 (486)
..+.+|.+.|.+++| ++++|++|+.||.|++||+.++ +....+..|...|.+++|++ .++++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346789999999999 7889999999999999999876 46677788999999999975 4899999999999
Q ss_pred EEECCCCCc------eeeEEeeecCcccEEEEEe--C--CCEEEEEeCCCcEEEEECCCceEEEEEc-------------
Q psy9182 338 VWDMVSPNE------ITLRRVLVGHRAAVNVVDF--D--EKYIVSASGDRTIKVWNTSSCEFVRTLN------------- 394 (486)
Q Consensus 338 i~d~~~~~~------~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~------------- 394 (486)
+||++.+.. ......+..|...|.++.| + +.++++++.|+.|++||+++++.+..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 999987642 1334566789999999999 4 8899999999999999998876544332
Q ss_pred CCcccEEEEEeC-----CCEEEEEeCCCcEEEEECCCCee--eEEecCcccCeEEEEe--cC----CEEEEEeCCCcEEE
Q psy9182 395 GHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGAC--LRVLEGHEELVRCIRF--DA----KRIVSGAYDGKIKV 461 (486)
Q Consensus 395 ~~~~~v~~~~~~-----~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~h~~~v~~~~~--~~----~~l~s~~~dg~v~i 461 (486)
.|...+.++.++ +.++++++.|+.+.+|+...++. +..+.+|...|++++| ++ ++|++++.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 577788898884 78999999999999998887765 7778899999999999 54 68999999999999
Q ss_pred EeCCCCC
Q psy9182 462 WNLVAAL 468 (486)
Q Consensus 462 wdl~~~~ 468 (486)
||+....
T Consensus 245 wd~~~~~ 251 (351)
T 3f3f_A 245 FKITEKL 251 (351)
T ss_dssp EEEEECC
T ss_pred EeCCCCc
Confidence 9998754
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=1.1e-21 Score=189.37 Aligned_cols=226 Identities=16% Similarity=0.142 Sum_probs=183.5
Q ss_pred eEEEEeCCCEEEEEecCCeEEEEECCCceeeE-----EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK-----VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT 309 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~ 309 (486)
.+++++++.++++++.++.|++||..+++... .+.+|...|.++++ ++.++++++.|+.|++||+++++.+..
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE
Confidence 45667767778888888999999999998887 34578889999999 788999999999999999999999999
Q ss_pred ecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--------CC
Q psy9182 310 LIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--------GD 376 (486)
Q Consensus 310 ~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--------~d 376 (486)
+..+...+.+++|+++ .+ ++++.++.|++||+++++.. ..... ...+.++.+ +++++++++ .|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~---~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI---RKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE---EECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE---EEecC-CCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 9888899999999864 55 45558999999999887543 22222 345777877 788888887 58
Q ss_pred CcEEEEECCCceEEEEEcCCcccEEEEEeC--CC-EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEE
Q psy9182 377 RTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV 451 (486)
Q Consensus 377 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~ 451 (486)
+.|++||+.+++.+..+ .|...+.++.++ ++ ++++++.|+.|++||+.+++.+..+. +...+.+++| ++++|+
T Consensus 283 g~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEE
T ss_pred CeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEE
Confidence 89999999999877765 345577777774 55 45677899999999999999888876 6678999999 788888
Q ss_pred EEeC---------------CCcEEEEeCCCCC
Q psy9182 452 SGAY---------------DGKIKVWNLVAAL 468 (486)
Q Consensus 452 s~~~---------------dg~v~iwdl~~~~ 468 (486)
+++. ||.|++||+.++.
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred EEecCCCccccccccccccceEEEEEECCCCc
Confidence 8876 5799999998653
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=5e-22 Score=190.16 Aligned_cols=302 Identities=10% Similarity=0.041 Sum_probs=209.9
Q ss_pred cccccCCccCcc-eEEEee----cCc----eeeeccc--ccccce--eeecCcccceeEEEeecceeEecCCCCceeccC
Q psy9182 106 DFISLLPNFDEK-YIVSAS----GDR----TIKVWNT--SSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172 (486)
Q Consensus 106 ~~~~~~~s~~~~-~l~tg~----~dg----~v~iWd~--~~~~~~--~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~ 172 (486)
.+....+++.|. ++++|+ .|| .|+|||+ .+++.+ ..+.+|...+..+++.....+.....+. ....
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~-~~~~ 142 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGI-KGAF 142 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSS-CCCT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCC-CCcC
Confidence 444455555554 566776 467 9999999 999877 5588998888877764210000000000 0011
Q ss_pred cceeecCCCC------CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE
Q psy9182 173 EFQIVSSSHD------DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK 246 (486)
Q Consensus 173 ~~~l~s~s~d------g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 246 (486)
+..++.++.+ +.|++||++.... ..+..+ .......+++|+++.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~-----------------------------~~l~~~-~~~v~~~~~Spdg~~ 192 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ-----------------------------FVVHRS-PQPLMSPAWSPDGSK 192 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC-----------------------------EEEEEE-SSCEEEEEECTTSSE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC-----------------------------EEEeCC-CCcceeeEEcCCCCE
Confidence 3334444332 7999999743211 111111 223445677889999
Q ss_pred EEEEecCC---eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCc--EEEEECCCCcEEEEecccCccEE
Q psy9182 247 IVSGLRDN---TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDST--VRVWDVNTGEMVNTLIHHCEAVL 318 (486)
Q Consensus 247 l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~i~ 318 (486)
|++++.++ .|++||+.+++.. .+..|...+.+++| |++.|+ +++.++. |++||+.+++. ..+..+...+.
T Consensus 193 la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~ 270 (415)
T 2hqs_A 193 LAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNT 270 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEE
T ss_pred EEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCccc
Confidence 99999885 9999999998875 46667888989888 788777 6666655 99999998876 56777788899
Q ss_pred EEEEcCC--eEEEEeC-CC--cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC---CcEEEEECCCce
Q psy9182 319 HLRFSNG--MMVTCSK-DR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD---RTIKVWNTSSCE 388 (486)
Q Consensus 319 ~~~~~~~--~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---~~i~iwd~~~~~ 388 (486)
++.|+++ .+++++. ++ .|++||+.+++.. .+..+...+..+.| +|++|+.++.+ ..|++||+.+++
T Consensus 271 ~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~----~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 271 EPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ----RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE----ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE----EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 9999865 6777765 44 6778898876532 23345566777777 88998888764 589999999887
Q ss_pred EEEEEcCCcccEEEEEe--CCCEEEEEeCCC---cEEEEECCCCeeeEEecCcccCeEEEEecC
Q psy9182 389 FVRTLNGHKRGIACLQY--RDRLVVSGSSDN---TIRLWDIECGACLRVLEGHEELVRCIRFDA 447 (486)
Q Consensus 389 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 447 (486)
. ..+..+. .+.++.| ++++|++++.++ .|++||+. +.....+..|.+.|.+++|.+
T Consensus 347 ~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~ 407 (415)
T 2hqs_A 347 V-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSP 407 (415)
T ss_dssp E-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECC
T ss_pred E-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccc
Confidence 6 4455554 6777777 588888888777 79999987 666788999999999999943
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=2.8e-21 Score=199.78 Aligned_cols=314 Identities=11% Similarity=0.079 Sum_probs=219.7
Q ss_pred cccccccCCccCcceEEEeec-Cc-----eeeecccccccceeeecCccc------------------------ceeEEE
Q psy9182 104 QRDFISLLPNFDEKYIVSASG-DR-----TIKVWNTSSCEFVRTLNGHKR------------------------GIACLQ 153 (486)
Q Consensus 104 ~~~~~~~~~s~~~~~l~tg~~-dg-----~v~iWd~~~~~~~~~l~~h~~------------------------~V~~~~ 153 (486)
...+.++.++|||++|++++. || .|++||+.+++....+..|.. .|..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 345778899999999999998 88 999999999988777765533 367777
Q ss_pred eecceeEecCCCCceeccCcceeecCCCCCcceeeecccc---cccccCCCCCCCCCCCCcccccccccCceeEEEEecc
Q psy9182 154 YRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNY---SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR 230 (486)
Q Consensus 154 ~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (486)
|+ +|+++|++++. +.|.+||+.++ .......
T Consensus 116 ~S---------------pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~------------------------------ 149 (741)
T 2ecf_A 116 WS---------------PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH------------------------------ 149 (741)
T ss_dssp EC---------------TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC------------------------------
T ss_pred EC---------------CCCCEEEEEeC-CcEEEEECCCCCcceEEEccc------------------------------
Confidence 76 67777877775 89999998664 2111100
Q ss_pred CCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCccc----------------EEEEEe--cCCEEEEEeC
Q psy9182 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS----------------VLCLQY--DERVIISGSS 292 (486)
Q Consensus 231 ~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------------v~~~~~--~~~~l~~~~~ 292 (486)
........+++|||++|+.++ ++.|++||+.+++.......+... +.++.| ||+.|++++.
T Consensus 150 ~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 150 GEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp SSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred CCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 012234567889999999887 569999999998877655544332 244555 8999998877
Q ss_pred CC---------------------------------cEEEEECCC-CcEEEEec--ccCccEEEEEEcCC--eEEEEeC--
Q psy9182 293 DS---------------------------------TVRVWDVNT-GEMVNTLI--HHCEAVLHLRFSNG--MMVTCSK-- 332 (486)
Q Consensus 293 dg---------------------------------~i~vwd~~~-~~~~~~~~--~~~~~i~~~~~~~~--~l~~~~~-- 332 (486)
|+ .|.+||+.+ ++...... .+...+..++| ++ .+++++.
T Consensus 229 d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~ 307 (741)
T 2ecf_A 229 DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSR 307 (741)
T ss_dssp ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEET
T ss_pred cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecc
Confidence 65 789999998 87654433 35677888888 65 5665543
Q ss_pred ---CCcEEEEECCCCCceeeEEeeec-CcccEEEEEe--CCCEEEEEeCCCcEEEEECC-CceEEEEEcCCcccEEEE-E
Q psy9182 333 ---DRSIAVWDMVSPNEITLRRVLVG-HRAAVNVVDF--DEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIACL-Q 404 (486)
Q Consensus 333 ---dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~~-~ 404 (486)
+..|++||+.+++.......... ....+..+.| ||+++++++.+|.+++|.+. .++ ...+..+...+..+ .
T Consensus 308 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~ 386 (741)
T 2ecf_A 308 DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLA 386 (741)
T ss_dssp TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEE
T ss_pred cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeE
Confidence 56899999998875433222111 0002234455 88889999999988888765 345 77787787777654 2
Q ss_pred e--CCCEEE-EEeCCC--cEEEEECCC-CeeeEEecCcccCeEEEEe--cCCEEEEEeCC----CcEEEEeCCCC
Q psy9182 405 Y--RDRLVV-SGSSDN--TIRLWDIEC-GACLRVLEGHEELVRCIRF--DAKRIVSGAYD----GKIKVWNLVAA 467 (486)
Q Consensus 405 ~--~~~~l~-~~~~dg--~v~iwd~~~-~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d----g~v~iwdl~~~ 467 (486)
| +++.|+ +++.++ .++||++.. +.....+.. ...+.+++| |+++|+....+ +.+.+|+...+
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 4 677665 455555 899999864 665667765 567888999 88887766543 46889987543
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.7e-20 Score=185.07 Aligned_cols=267 Identities=12% Similarity=0.106 Sum_probs=202.7
Q ss_pred cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG 250 (486)
Q Consensus 171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 250 (486)
+++..+++++.|++|.+||..+... +..+.. ++....+++++++++++++
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~----------------------------~~~i~~--g~~~~~v~~spdg~~l~v~ 196 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKI----------------------------VKVIDT--GYAVHISRMSASGRYLLVI 196 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCE----------------------------EEEEEC--STTEEEEEECTTSCEEEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceE----------------------------EEEEec--CcccceEEECCCCCEEEEE
Confidence 4667788999999999999755332 222221 1224456788999999999
Q ss_pred ecCCeEEEEEC--CCceeeEEEcCCcccEEEEEe------cCCEEEEEeC-CCcEEEEECCCCcEEEEeccc--------
Q psy9182 251 LRDNTIKVWDR--VSLQCIKVLTGHTGSVLCLQY------DERVIISGSS-DSTVRVWDVNTGEMVNTLIHH-------- 313 (486)
Q Consensus 251 ~~dg~i~i~d~--~~~~~~~~~~~~~~~v~~~~~------~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~-------- 313 (486)
+.|+.|.+||+ .+++.+..+.. ...+..+++ +++++++++. +++|.+||..+++++..+..+
T Consensus 197 ~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 197 GRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQT 275 (543)
T ss_dssp ETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCC
T ss_pred CCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccc
Confidence 99999999999 88998888874 344566655 5788888874 899999999999998887642
Q ss_pred ---CccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEEC
Q psy9182 314 ---CEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNT 384 (486)
Q Consensus 314 ---~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~ 384 (486)
...+..+.++++ .+++...++.|.+||+.+.+....... .+...+..+.| +++++++++ .+++|.+||+
T Consensus 276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 276 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDS 353 (543)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecCCCeEEEEEC
Confidence 236888888853 667778899999999988765432222 23344555556 788776655 5889999999
Q ss_pred CCceEEEEEcC----CcccEEEEE-eC-CCEEEEEe-CCCcEEEEECCC-------CeeeEEecCcccCeEEEEe--cCC
Q psy9182 385 SSCEFVRTLNG----HKRGIACLQ-YR-DRLVVSGS-SDNTIRLWDIEC-------GACLRVLEGHEELVRCIRF--DAK 448 (486)
Q Consensus 385 ~~~~~~~~~~~----~~~~v~~~~-~~-~~~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~--~~~ 448 (486)
.+++++..+.. |.+....+. .+ +.+++++. .|++|.+||+.+ +++++++.+|...+..|++ +++
T Consensus 354 ~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~ 433 (543)
T 1nir_A 354 KDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSS 433 (543)
T ss_dssp TTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCC
T ss_pred CCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCC
Confidence 99999988874 554443343 34 56667765 689999999998 8999999999988888988 889
Q ss_pred EEEEEe-------CCCcEEEEeCCCCCCC
Q psy9182 449 RIVSGA-------YDGKIKVWNLVAALDP 470 (486)
Q Consensus 449 ~l~s~~-------~dg~v~iwdl~~~~~~ 470 (486)
+|++++ .+++|.+||+.+....
T Consensus 434 ~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 434 HLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred cEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 999987 2789999999987644
No 131
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=3.7e-20 Score=198.01 Aligned_cols=220 Identities=13% Similarity=0.108 Sum_probs=173.9
Q ss_pred ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC-----------cccEE--EEE-ecCCEEEEEeCCCcEEEEEC
Q psy9182 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH-----------TGSVL--CLQ-YDERVIISGSSDSTVRVWDV 301 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------~~~v~--~~~-~~~~~l~~~~~dg~i~vwd~ 301 (486)
...+++++|+.++.+ .++.|.+||....+ +..+..+ ...+. +++ .|++.+++++ ++.|.+|++
T Consensus 248 ~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~ 324 (1045)
T 1k32_A 248 YPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDV 324 (1045)
T ss_dssp CEEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECT
T ss_pred ceeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcC
Confidence 456889999988887 58999999985443 3355542 22444 455 5778888877 789999999
Q ss_pred CCCcEEEEecccCc-cEEEEEEcCC--eEEEEeCCCcEE-EEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC
Q psy9182 302 NTGEMVNTLIHHCE-AVLHLRFSNG--MMVTCSKDRSIA-VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG 375 (486)
Q Consensus 302 ~~~~~~~~~~~~~~-~i~~~~~~~~--~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 375 (486)
.+++... +..+.. .+..+.|+ + .++.++.++.+. +||+..++.. . +.++...+..+.| +|++|++++.
T Consensus 325 ~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~---~-l~~~~~~~~~~~~SpDG~~la~~~~ 398 (1045)
T 1k32_A 325 SGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE---K-FEENLGNVFAMGVDRNGKFAVVAND 398 (1045)
T ss_dssp TSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE---E-CCCCCCSEEEEEECTTSSEEEEEET
T ss_pred CCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce---E-ecCCccceeeeEECCCCCEEEEECC
Confidence 8877543 555666 78888888 5 677778788888 8998876532 2 2266777888888 8999999999
Q ss_pred CCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCC----------cEEEEECCCCeeeEEecCcccCeEEE
Q psy9182 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN----------TIRLWDIECGACLRVLEGHEELVRCI 443 (486)
Q Consensus 376 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg----------~v~iwd~~~~~~~~~~~~h~~~v~~~ 443 (486)
++.|++||+.+++....+..|...+..+.| +|++|++++.++ .|++||+.+++ +..+..|...+.++
T Consensus 399 ~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~ 477 (1045)
T 1k32_A 399 RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAP 477 (1045)
T ss_dssp TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEE
T ss_pred CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCc
Confidence 999999999999988888788888877777 588888887654 89999999887 67788888889999
Q ss_pred Ee--cCCEEEEEeCCCcEEEEeCC
Q psy9182 444 RF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 444 ~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
+| ||++|+.++.++...+|+..
T Consensus 478 ~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 478 AFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EECTTSCEEEEEESCCCCCEECSS
T ss_pred eEcCCCCEEEEEecccCCcCcchh
Confidence 99 89999999999888888864
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=8.5e-19 Score=162.71 Aligned_cols=227 Identities=8% Similarity=0.096 Sum_probs=153.9
Q ss_pred EEeCCCEEEEEec-CCeEEEEECCCcee-eEEEcCCcccEEEEEe--cCCEEEEEeCCC---cEEEEECCCCcEEEEecc
Q psy9182 240 LQYDDHKIVSGLR-DNTIKVWDRVSLQC-IKVLTGHTGSVLCLQY--DERVIISGSSDS---TVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 240 ~~~~~~~l~~~~~-dg~i~i~d~~~~~~-~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~ 312 (486)
++++++++++++. ++.|.+||..+++. ...+..+..+..++++ ++++++++..++ .|.+||+.+++.+..+..
T Consensus 47 ~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 47 ITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp ECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred EcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence 3456665555544 77899999888877 6666656555543555 788888655553 899999999998887765
Q ss_pred cCccEEEEEEcCC--eE-EEEeCCCc-EEEEECCCCCceeeE-EeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEEC
Q psy9182 313 HCEAVLHLRFSNG--MM-VTCSKDRS-IAVWDMVSPNEITLR-RVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNT 384 (486)
Q Consensus 313 ~~~~i~~~~~~~~--~l-~~~~~dg~-i~i~d~~~~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~ 384 (486)
+ .....++|+++ .+ ++...++. |.+|++......... ............+.+ +++++++++ .++.|.+||+
T Consensus 127 ~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 127 P-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp C-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred C-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 3 45688999875 44 45556688 999999865433211 111233344566776 788665554 6889999999
Q ss_pred CCceE---EEEEcCCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCCCee--eEEecCc----ccC---eEEEEe--cC
Q psy9182 385 SSCEF---VRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRLWDIECGAC--LRVLEGH----EEL---VRCIRF--DA 447 (486)
Q Consensus 385 ~~~~~---~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~v~iwd~~~~~~--~~~~~~h----~~~---v~~~~~--~~ 447 (486)
.+++. +..+..+ ..+..+.+ ++++++++. .++.|.+||+.+++. +..+..+ ... ...++| |+
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 284 (331)
T 3u4y_A 206 QNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTE 284 (331)
T ss_dssp SSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTS
T ss_pred CCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCC
Confidence 99887 7777644 34445555 588666554 578899999999887 4444322 222 244677 88
Q ss_pred CEEEEEeC-CCcEEEEeCCCCC
Q psy9182 448 KRIVSGAY-DGKIKVWNLVAAL 468 (486)
Q Consensus 448 ~~l~s~~~-dg~v~iwdl~~~~ 468 (486)
++|++++. ++.|.+||+....
T Consensus 285 ~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 285 TKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp SEEEEEETTTTEEEEEETTSCE
T ss_pred CEEEEecCCCCcEEEEEecCCc
Confidence 88766554 6699999998653
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=1.8e-18 Score=162.03 Aligned_cols=218 Identities=8% Similarity=0.069 Sum_probs=159.9
Q ss_pred EEEeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCccc---------EEEEEe--cCCEEEEEe--CCCcEEEEECCCC
Q psy9182 239 CLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGS---------VLCLQY--DERVIISGS--SDSTVRVWDVNTG 304 (486)
Q Consensus 239 ~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------v~~~~~--~~~~l~~~~--~dg~i~vwd~~~~ 304 (486)
++++++++++ +...++.|.+||..+++.+..+..+... +.++.+ +++.+++++ .++.|.+||..++
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence 3456666544 4445788999999988888777654322 566666 778777765 4788999999999
Q ss_pred cEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEe--CCCEEEEEeC-CCc
Q psy9182 305 EMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDF--DEKYIVSASG-DRT 378 (486)
Q Consensus 305 ~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~-d~~ 378 (486)
+.+..+..+...+..+.+++ +.+++++.++.|.+||+.+++........ .++...+..+.+ +++++++++. ++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 175 KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 99888875555577788875 47888899999999999887655333221 124445666666 7887776665 489
Q ss_pred EEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC
Q psy9182 379 IKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY 455 (486)
Q Consensus 379 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~ 455 (486)
|.+||..+++.+..+......-..+..++++++++. .++.|.+||..+++.+..+..+. .+.+++| ++++|+++..
T Consensus 255 v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 255 VLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp EEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEE
T ss_pred EEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEc
Confidence 999999999998888765544445555788665555 68999999999999988887543 6788999 7887777766
Q ss_pred CC
Q psy9182 456 DG 457 (486)
Q Consensus 456 dg 457 (486)
++
T Consensus 334 ~~ 335 (353)
T 3vgz_A 334 QK 335 (353)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=6.4e-20 Score=189.02 Aligned_cols=306 Identities=11% Similarity=0.065 Sum_probs=204.2
Q ss_pred ccccccccCCccCcceEEEeecCceeeecccccccceeeecCccc---ceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS 179 (486)
Q Consensus 103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~---~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~ 179 (486)
......++.|+|||+++++ +.||+|++||+.+++....+.+|.. .|.+++|+ +|+++|+++
T Consensus 15 ~~~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~S---------------pDg~~l~~~ 78 (723)
T 1xfd_A 15 FKIHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEIS---------------PDREYALFS 78 (723)
T ss_dssp TCCCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEEC---------------TTSSEEEEE
T ss_pred CcccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEEC---------------CCCCEEEEE
Confidence 3445778899999998876 7899999999999998888888765 48999997 455555555
Q ss_pred CC---------CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182 180 SH---------DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG 250 (486)
Q Consensus 180 s~---------dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 250 (486)
+. ++.+.+||+.++.......... ........+++|||+.|+.+
T Consensus 79 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~---------------------------~~~~~~~~~~SPdG~~la~~ 131 (723)
T 1xfd_A 79 YNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV---------------------------SNAKLQYAGWGPKGQQLIFI 131 (723)
T ss_dssp ESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC---------------------------CSCCCSBCCBCSSTTCEEEE
T ss_pred ecCccceeecceeeEEEEECCCCceEeccCCcc---------------------------ccccccccEECCCCCEEEEE
Confidence 44 4778899987654321111000 01112345688999999998
Q ss_pred ecCCeEEEEECCCceeeEEEcCCcccE------------------EEEEe--cCCEEEEEeCCC----------------
Q psy9182 251 LRDNTIKVWDRVSLQCIKVLTGHTGSV------------------LCLQY--DERVIISGSSDS---------------- 294 (486)
Q Consensus 251 ~~dg~i~i~d~~~~~~~~~~~~~~~~v------------------~~~~~--~~~~l~~~~~dg---------------- 294 (486)
+. +.|++||+.+++.......+...+ .++.| ||+.|++++.++
T Consensus 132 ~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 210 (723)
T 1xfd_A 132 FE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIY 210 (723)
T ss_dssp ET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSS
T ss_pred EC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCC
Confidence 76 799999999988877666544433 56777 889999887553
Q ss_pred ------------------cEEEEECCCCcEEEEeccc------CccEEEEEEcCC--eEEEEeC----CCcEEEEECCCC
Q psy9182 295 ------------------TVRVWDVNTGEMVNTLIHH------CEAVLHLRFSNG--MMVTCSK----DRSIAVWDMVSP 344 (486)
Q Consensus 295 ------------------~i~vwd~~~~~~~~~~~~~------~~~i~~~~~~~~--~l~~~~~----dg~i~i~d~~~~ 344 (486)
.|++||+.+++....+..+ ...+..+.|+++ .+++... +..|++||+.++
T Consensus 211 ~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 211 PTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp CCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred CcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 7999999988865566543 567889999976 4544432 357999999888
Q ss_pred CceeeEEeeecCcccE----EEEEe--CCCEEEE--EeCCC------cEEEEE-CCCce--EEEEEcCCcccEE---EEE
Q psy9182 345 NEITLRRVLVGHRAAV----NVVDF--DEKYIVS--ASGDR------TIKVWN-TSSCE--FVRTLNGHKRGIA---CLQ 404 (486)
Q Consensus 345 ~~~~~~~~~~~~~~~v----~~~~~--~~~~l~~--~~~d~------~i~iwd-~~~~~--~~~~~~~~~~~v~---~~~ 404 (486)
+....... .+...+ ..+.| ||+.|+. +..++ .|.+|| ..+++ ....+..+...+. .++
T Consensus 291 ~~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s 368 (723)
T 1xfd_A 291 VCTKKHED--ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD 368 (723)
T ss_dssp CEEEEEEE--ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred cceEEEEe--ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence 75432221 122222 13444 8886664 45666 577788 34444 1444543333343 344
Q ss_pred eCCCEEEEEeCC---CcEEEEECCCC--eeeEEecC---cccCeEEEEe--cCCEEEEEe
Q psy9182 405 YRDRLVVSGSSD---NTIRLWDIECG--ACLRVLEG---HEELVRCIRF--DAKRIVSGA 454 (486)
Q Consensus 405 ~~~~~l~~~~~d---g~v~iwd~~~~--~~~~~~~~---h~~~v~~~~~--~~~~l~s~~ 454 (486)
.+++.|+..+.+ +.+++|++... .....+.. |...+..++| |+++|+...
T Consensus 369 pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 369 EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 468888766655 78999998643 23344443 5667888888 788877653
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=1.3e-19 Score=173.45 Aligned_cols=216 Identities=14% Similarity=0.119 Sum_probs=167.6
Q ss_pred CCEEEEEecC------CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC---cEEEEECCCCcEEEEecc
Q psy9182 244 DHKIVSGLRD------NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS---TVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 244 ~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~ 312 (486)
+..++.++.+ +.|++||... .....+.+|...+.+++| +++.|++++.++ .|++||+.+++.. .+..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVAS 220 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEEC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eeec
Confidence 5566666554 7999999974 456777778899999988 789999999875 9999999998875 4566
Q ss_pred cCccEEEEEEcCC--eEE-EEeCCCc--EEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-CC--cEEEE
Q psy9182 313 HCEAVLHLRFSNG--MMV-TCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-DR--TIKVW 382 (486)
Q Consensus 313 ~~~~i~~~~~~~~--~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~--~i~iw 382 (486)
+...+.+++|+|+ .++ +++.++. |++||+.+++. ..+..|...+.++.| +|++|+.++. ++ .|.+|
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI----RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE----EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE----EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 7788999999975 555 5666554 99999988754 334567778888888 7888888876 44 68888
Q ss_pred ECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCC---CcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC
Q psy9182 383 NTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD---NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY 455 (486)
Q Consensus 383 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~ 455 (486)
|+.+++. ..+..+...+..+.| ++++|++++.+ +.|++||+.+++. ..+..|. .+.+++| ||++|++++.
T Consensus 297 d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 297 NINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp ETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred ECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 9988764 455566667777777 58888887764 5899999998876 4565554 8899999 8899999888
Q ss_pred CC---cEEEEeCCCCC
Q psy9182 456 DG---KIKVWNLVAAL 468 (486)
Q Consensus 456 dg---~v~iwdl~~~~ 468 (486)
|+ .|++||+..+.
T Consensus 374 ~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 374 QGMGSVLNLVSTDGRF 389 (415)
T ss_dssp ETTEEEEEEEETTSCC
T ss_pred CCCccEEEEEECCCCc
Confidence 77 79999997543
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=1.7e-19 Score=185.26 Aligned_cols=307 Identities=13% Similarity=0.085 Sum_probs=203.9
Q ss_pred ccccCCccCcceEEEeecCceeeecccccccce-eeecCcc-----------------cceeEEEeecceeEecCCCCce
Q psy9182 107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHK-----------------RGIACLQYRDRLVVSGSSDNTI 168 (486)
Q Consensus 107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~-~~l~~h~-----------------~~V~~~~~~~~~~~~~~~d~~i 168 (486)
+..+.+. |..+++++.|| | +||+.+|+.+ ..+..|. ..|.+++|+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~s------------- 90 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDA------------- 90 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEET-------------
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEEC-------------
Confidence 3444555 55677777788 8 9999999874 4444443 458888887
Q ss_pred eccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEE
Q psy9182 169 RYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIV 248 (486)
Q Consensus 169 ~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 248 (486)
+| ..++.+ .++.+++||+.++.... +... .......+++|+|+.|+
T Consensus 91 --pd-~~~~~~-~~~~i~~~d~~~~~~~~-----------------------------l~~~-~~~~~~~~~SpdG~~la 136 (706)
T 2z3z_A 91 --GR-GLVVLF-TQGGLVGFDMLARKVTY-----------------------------LFDT-NEETASLDFSPVGDRVA 136 (706)
T ss_dssp --TT-TEEEEE-ETTEEEEEETTTTEEEE-----------------------------EECC-TTCCTTCEECTTSSEEE
T ss_pred --CC-CeEEEE-ECCEEEEEECCCCceEE-----------------------------ccCC-cccccCCcCCCCCCEEE
Confidence 45 333333 45999999986543211 1111 12233457899999999
Q ss_pred EEecCCeEEEEECCC-----ceeeEEEcCCccc--------------EEEEEe--cCCEEEEEe----------------
Q psy9182 249 SGLRDNTIKVWDRVS-----LQCIKVLTGHTGS--------------VLCLQY--DERVIISGS---------------- 291 (486)
Q Consensus 249 ~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~--------------v~~~~~--~~~~l~~~~---------------- 291 (486)
++ .++.|++||+.+ ++.......+... +.++.| |+++|++++
T Consensus 137 ~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~ 215 (706)
T 2z3z_A 137 YV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHP 215 (706)
T ss_dssp EE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCS
T ss_pred EE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCC
Confidence 85 689999999998 7766555444432 356666 899999887
Q ss_pred -----------------CCCcEEEEECCCCcEEEEec--ccCccEEEEEEcCC--eEEEEeCCC-----cEEEEECCCCC
Q psy9182 292 -----------------SDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRFSNG--MMVTCSKDR-----SIAVWDMVSPN 345 (486)
Q Consensus 292 -----------------~dg~i~vwd~~~~~~~~~~~--~~~~~i~~~~~~~~--~l~~~~~dg-----~i~i~d~~~~~ 345 (486)
.+..|++||+.+++...... .+...+.++.|+++ .+++++.++ .|++||+.+++
T Consensus 216 ~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~ 295 (706)
T 2z3z_A 216 LEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR 295 (706)
T ss_dssp SSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC
T ss_pred CCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc
Confidence 44679999999887654432 35567899999865 677777665 89999999874
Q ss_pred ceeeEEeeecCccc---EE--EEEe--CCCEEEEEeCCCcEEEEECC-CceEEEEEcCCcccEEE-EEe--CCCEEEEEe
Q psy9182 346 EITLRRVLVGHRAA---VN--VVDF--DEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIAC-LQY--RDRLVVSGS 414 (486)
Q Consensus 346 ~~~~~~~~~~~~~~---v~--~~~~--~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~-~~~--~~~~l~~~~ 414 (486)
....... ..+... +. .+.. +|+++++++.++.+++|++. +++.+..+..+...+.. +.+ +++.|+.++
T Consensus 296 ~~~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 296 FVRTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp EEEEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEE
T ss_pred eeeEEEE-ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEe
Confidence 3322221 111111 12 3444 78899999999999999876 67777888888777765 566 467666554
Q ss_pred -CCC----cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCC----CcEEEEeCCCCC
Q psy9182 415 -SDN----TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD----GKIKVWNLVAAL 468 (486)
Q Consensus 415 -~dg----~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d----g~v~iwdl~~~~ 468 (486)
.++ .|..||+.+++ ...+. |...+.+++| |+++|+.+..+ +.|++||+.++.
T Consensus 375 ~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 375 TEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred cCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 444 67777887765 34444 6677899999 88888776544 569999998763
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=1.1e-18 Score=162.25 Aligned_cols=268 Identities=10% Similarity=0.051 Sum_probs=189.4
Q ss_pred ceEEEeecCceeeecccccccceeeecCcc-c-ceeEEEeecceeEecCCCCceeccCcce-eecCCCCCcceeeecccc
Q psy9182 117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHK-R-GIACLQYRDRLVVSGSSDNTIRYRDEFQ-IVSSSHDDTILIWDFLNY 193 (486)
Q Consensus 117 ~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~-~-~V~~~~~~~~~~~~~~~d~~i~~~~~~~-l~s~s~dg~i~vWd~~~~ 193 (486)
+++++++.++.|++||..+++.+..+.... . .+..++|+ +++.. +++++.++.|.+||+.+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s---------------~dg~~l~v~~~~~~~v~~~d~~~~ 66 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVA---------------PGGRIAYATVNKSESLVKIDLVTG 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEEC---------------TTSSEEEEEETTTTEEEEEETTTC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEc---------------CCCCEEEEEeCCCCeEEEEECCCC
Confidence 478999999999999999999888876332 2 36778886 45543 456677889999998654
Q ss_pred cccccCCCCCCCCCCCCcccccccccCceeEEEEeccC----CCccceEEEEeCCCEEEEEe------------cCCeEE
Q psy9182 194 SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS----ENSKGVYCLQYDDHKIVSGL------------RDNTIK 257 (486)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~l~~~~------------~dg~i~ 257 (486)
.... .+.... ......+++++++++++++. .++.|.
T Consensus 67 ~~~~----------------------------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 67 ETLG----------------------------RIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp CEEE----------------------------EEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred CeEe----------------------------eEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEE
Confidence 3221 111100 01233467888999988886 579999
Q ss_pred EEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccC--ccEEEEEEcC--CeEEEEe
Q psy9182 258 VWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC--EAVLHLRFSN--GMMVTCS 331 (486)
Q Consensus 258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~i~~~~~~~--~~l~~~~ 331 (486)
+||+.+++.+..+.. ...+.++.+ ++++++++ ++.|.+||+.+++....+..+. ..+ .+++ ..+++.+
T Consensus 119 v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~~ 192 (337)
T 1pby_B 119 LYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAET---YAQPDVLAVWNQH 192 (337)
T ss_dssp EEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTT---BCCCBCCCCCCCC
T ss_pred EEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCc---eeCCCccEEeeec
Confidence 999999988877764 334555555 78878777 6889999999998887775433 222 3333 2333222
Q ss_pred C-CC-----------------------cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182 332 K-DR-----------------------SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 385 (486)
Q Consensus 332 ~-dg-----------------------~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~ 385 (486)
. ++ .|.+||+.+++.. ......+...+..+.+ ++++++++ ++.|.+||+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~ 268 (337)
T 1pby_B 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA--MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLE 268 (337)
T ss_dssp TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE--EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETT
T ss_pred cCCCceeeeeeccccccccccccccccceEEEeCCCCCce--EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECC
Confidence 2 22 4789999987754 2233445556667777 78888888 6899999999
Q ss_pred CceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCccc
Q psy9182 386 SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 438 (486)
Q Consensus 386 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~ 438 (486)
+++.+..+..+. .+.++.+ ++++|++++.++.|.+||+.+++.+..+..+..
T Consensus 269 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 269 KNASIKRVPLPH-SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp TTEEEEEEECSS-CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred CCcCcceecCCC-ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 999888876443 3455666 588888888999999999999999888876543
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=9.7e-18 Score=156.17 Aligned_cols=280 Identities=11% Similarity=0.120 Sum_probs=178.9
Q ss_pred eEEEeecCceeeecccc-ccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC-Ccceeeeccc-
Q psy9182 118 YIVSASGDRTIKVWNTS-SCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD-DTILIWDFLN- 192 (486)
Q Consensus 118 ~l~tg~~dg~v~iWd~~-~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d-g~i~vWd~~~- 192 (486)
.+++++.|+.|++||+. +++ .+.. ..|...+.+++|+ +++.++++++.+ +.|.+|+++.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s---------------pdg~~l~~~~~~~~~v~~~~~~~~ 70 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVS---------------PDKRYLYVGVRPEFRVLAYRIAPD 70 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEEC---------------TTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEEC---------------CCCCEEEEeecCCCeEEEEEecCC
Confidence 44555789999999995 332 2333 3466678888887 566667666665 8999999852
Q ss_pred -ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec-CCeEEEEEC---CCceee
Q psy9182 193 -YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR-DNTIKVWDR---VSLQCI 267 (486)
Q Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg~i~i~d~---~~~~~~ 267 (486)
+.. ..+..+.. ......++++++++++++++. ++.|.+||+ ...+..
T Consensus 71 ~~~~--------------------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 71 DGAL--------------------------TFAAESAL--PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp TCCE--------------------------EEEEEEEC--SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred CCce--------------------------eecccccc--CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc
Confidence 110 01112221 124455778889998877665 889999999 444555
Q ss_pred EEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECCC-CcEEE----Eecc-cCccEEEEEEcCC--eEEEE-eCCCc
Q psy9182 268 KVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVNT-GEMVN----TLIH-HCEAVLHLRFSNG--MMVTC-SKDRS 335 (486)
Q Consensus 268 ~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~-~~~~~----~~~~-~~~~i~~~~~~~~--~l~~~-~~dg~ 335 (486)
..+..+. .+.++.+ +++++++++ .++.|.+||+.+ ++... .+.. ....+..+.|+++ .++++ ..++.
T Consensus 123 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~ 201 (343)
T 1ri6_A 123 DVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS 201 (343)
T ss_dssp EEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred ccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE
Confidence 5655443 4666666 778888777 889999999987 65432 2222 3446788999865 45544 48899
Q ss_pred EEEEECCC--CCceeeEEeee---cC---cccEEEEEe--CCCEEEEE-eCCCcEEEEECC----CceEEEEEcCCcccE
Q psy9182 336 IAVWDMVS--PNEITLRRVLV---GH---RAAVNVVDF--DEKYIVSA-SGDRTIKVWNTS----SCEFVRTLNGHKRGI 400 (486)
Q Consensus 336 i~i~d~~~--~~~~~~~~~~~---~~---~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~----~~~~~~~~~~~~~~v 400 (486)
|.+||+.. ++.. ...... .. ...+..+.+ ++++++++ ..++.|.+||+. +.+.+..+..+.. +
T Consensus 202 i~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~ 279 (343)
T 1ri6_A 202 VDVWELKDPHGNIE-CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-P 279 (343)
T ss_dssp EEEEESSCTTSCCE-EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-C
T ss_pred EEEEEecCCCCcEE-EEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-c
Confidence 99999964 3221 111111 11 234556666 67777754 478999999998 3455555655544 6
Q ss_pred EEEEe--CCCEEEEEe-CCCcEEEE--ECCCCee--eEEecCcccCeEEEEe
Q psy9182 401 ACLQY--RDRLVVSGS-SDNTIRLW--DIECGAC--LRVLEGHEELVRCIRF 445 (486)
Q Consensus 401 ~~~~~--~~~~l~~~~-~dg~v~iw--d~~~~~~--~~~~~~h~~~v~~~~~ 445 (486)
..+.+ ++++|++++ .++.|.+| |..+++. +..+... ....+++|
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~ 330 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVV 330 (343)
T ss_dssp CCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEE
T ss_pred ceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEE
Confidence 66666 478888777 68999999 4456643 3344332 33445555
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=8.9e-19 Score=187.32 Aligned_cols=305 Identities=13% Similarity=0.081 Sum_probs=217.3
Q ss_pred cccccCCccCcceEEEeecCceeeecccccccceeeecC-----------cccceeEEEee-cceeEecCCCCceeccCc
Q psy9182 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-----------HKRGIACLQYR-DRLVVSGSSDNTIRYRDE 173 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~-----------h~~~V~~~~~~-~~~~~~~~~d~~i~~~~~ 173 (486)
.+....++|||++|+.+ .++.|++||+... .+..+.+ |...+..++|+ + |+
T Consensus 246 ~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p---------------dG 308 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFS-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPL---------------DG 308 (1045)
T ss_dssp SSCEEEEEESSSCEEEE-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEEC---------------GG
T ss_pred CcceeeEcCCCCEEEEE-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCC---------------CC
Confidence 34566889999999998 5899999999544 3446655 34467888886 4 56
Q ss_pred ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecC
Q psy9182 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD 253 (486)
Q Consensus 174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 253 (486)
..+++++ ++.+.+|++........ ...........+++ +++.++.++.+
T Consensus 309 ~~la~~~-~~~i~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~s-dg~~l~~~s~~ 357 (1045)
T 1k32_A 309 DLIAFVS-RGQAFIQDVSGTYVLKV-----------------------------PEPLRIRYVRRGGD-TKVAFIHGTRE 357 (1045)
T ss_dssp GCEEEEE-TTEEEEECTTSSBEEEC-----------------------------SCCSCEEEEEECSS-SEEEEEEEETT
T ss_pred CEEEEEE-cCEEEEEcCCCCceEEc-----------------------------cCCCcceEEeeeEc-CCCeEEEEECC
Confidence 6666665 78899998754322110 00001022234456 78888888888
Q ss_pred CeEE-EEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEE
Q psy9182 254 NTIK-VWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMV 328 (486)
Q Consensus 254 g~i~-i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~ 328 (486)
+.+. +||..+++... +.+|...+.+++| |++.|++++.++.|++||+.+++.......+...+..++|+|+ .++
T Consensus 358 ~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred CceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEE
Confidence 8898 99998876544 3477788888888 8899999999999999999999988777788888899999875 677
Q ss_pred EEeCC----------CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE-------
Q psy9182 329 TCSKD----------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF------- 389 (486)
Q Consensus 329 ~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~------- 389 (486)
+++.+ +.|++||+.+++ . ..+..|...+..+.| +|++|+.++.++...+|+......
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~-~---~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~ 512 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRK-I---FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK 512 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTE-E---EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBE
T ss_pred EEecCccccccCCCCCeEEEEECCCCc-E---EEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCce
Confidence 66654 489999998764 2 345566777777777 899999999877777776432211
Q ss_pred ------------------------------------EEEEcCCcccEEEEEeC--CCEEEE-------------EeCCCc
Q psy9182 390 ------------------------------------VRTLNGHKRGIACLQYR--DRLVVS-------------GSSDNT 418 (486)
Q Consensus 390 ------------------------------------~~~~~~~~~~v~~~~~~--~~~l~~-------------~~~dg~ 418 (486)
+..+..|...+..+.++ +.++++ ...+..
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~ 592 (1045)
T 1k32_A 513 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGV 592 (1045)
T ss_dssp EEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEE
T ss_pred eEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCce
Confidence 12333455566666664 555664 123557
Q ss_pred EEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 419 v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
|.+||+.+++..... ..+.+++| ||++|++++.| .|++||+.++.
T Consensus 593 l~~~d~~~~~~~~l~----~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 593 LLKYDVKTRKVTEVK----NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EEEEETTTCCEEEEE----EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred EEEEECCCCcEEEee----cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 889999888754333 56778888 89999998866 79999998765
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=8.2e-18 Score=156.68 Aligned_cols=229 Identities=14% Similarity=0.170 Sum_probs=154.8
Q ss_pred ccceEEEEeCCCEEEEEecC-CeEEEEECC--Cce--eeEEEcCCcccEEEEEe--cCCEEEEEeC-CCcEEEEECC---
Q psy9182 234 SKGVYCLQYDDHKIVSGLRD-NTIKVWDRV--SLQ--CIKVLTGHTGSVLCLQY--DERVIISGSS-DSTVRVWDVN--- 302 (486)
Q Consensus 234 ~~~v~~~~~~~~~l~~~~~d-g~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~--- 302 (486)
....++++++++++++++.+ +.|.+|++. +++ .+..+..+. .+.++++ +++++++++. ++.|.+||+.
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~ 117 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL 117 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc
Confidence 34457788999998888887 899999987 444 344555443 5666776 7787766654 8889999994
Q ss_pred CCcEEEEecccCccEEEEEEcCC--eEEEEe-CCCcEEEEECCC-CCceeeE--EeeecCcccEEEEEe--CCCEEEEEe
Q psy9182 303 TGEMVNTLIHHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMVS-PNEITLR--RVLVGHRAAVNVVDF--DEKYIVSAS 374 (486)
Q Consensus 303 ~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~~-~~~~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~ 374 (486)
+.+....+.. ...+.+++|+++ .+++++ .++.|.+||+.+ ++..... .........+..+.+ +++++++++
T Consensus 118 ~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 118 PVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp EEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred cccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence 3344444443 345778888864 677766 899999999987 4332211 112223345666777 778776555
Q ss_pred -CCCcEEEEECCC--ceE--EEEEc---CC---cccEEEEEeC--CCEEE-EEeCCCcEEEEECC--C--CeeeEEecCc
Q psy9182 375 -GDRTIKVWNTSS--CEF--VRTLN---GH---KRGIACLQYR--DRLVV-SGSSDNTIRLWDIE--C--GACLRVLEGH 436 (486)
Q Consensus 375 -~d~~i~iwd~~~--~~~--~~~~~---~~---~~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~--~--~~~~~~~~~h 436 (486)
.++.|.+||+.. ++. ...+. .. ...+..+.++ +++|+ ++..++.|.+||+. + .+.+..+..+
T Consensus 197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~ 276 (343)
T 1ri6_A 197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE 276 (343)
T ss_dssp TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS
T ss_pred CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC
Confidence 789999999953 432 22332 11 2245566664 77776 44579999999998 2 3455556555
Q ss_pred ccCeEEEEe--cCCEEEEEe-CCCcEEEEeCC
Q psy9182 437 EELVRCIRF--DAKRIVSGA-YDGKIKVWNLV 465 (486)
Q Consensus 437 ~~~v~~~~~--~~~~l~s~~-~dg~v~iwdl~ 465 (486)
.. +.+++| ++++|++++ .|+.|.+|+++
T Consensus 277 ~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 277 TQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred Cc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 44 888899 788888887 68999999665
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=2.8e-18 Score=156.09 Aligned_cols=212 Identities=14% Similarity=0.112 Sum_probs=150.0
Q ss_pred EeCCCEEEEEecCCeEEEEECCC-ceeeEEEcCCc-ccEEEEEe--cCCEEEEEeC--CC--cEEEEECCCCcEEEEecc
Q psy9182 241 QYDDHKIVSGLRDNTIKVWDRVS-LQCIKVLTGHT-GSVLCLQY--DERVIISGSS--DS--TVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 241 ~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~--dg--~i~vwd~~~~~~~~~~~~ 312 (486)
+++++++++++ ++.|++||+.+ ++.......+. ..+.++.| +++++++++. ++ .|..++..+++ ...+..
T Consensus 50 spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 127 (297)
T 2ojh_A 50 SPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK 127 (297)
T ss_dssp CTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS
T ss_pred CCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec
Confidence 45666677665 67888888888 77666665553 55666666 7889999883 34 45555555554 334433
Q ss_pred cCccEEEEEEcCC--eEE-EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECC-
Q psy9182 313 HCEAVLHLRFSNG--MMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTS- 385 (486)
Q Consensus 313 ~~~~i~~~~~~~~--~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~- 385 (486)
+ ..+..+.|+++ .++ ++..++.+++|++...... ...+..+...+.++.| ++++++.++ .++.+++|++.
T Consensus 128 ~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 128 N-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV--ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp S-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC--EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred C-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc--ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 3 34888899865 454 7788999999986432211 1344556777888888 788777666 58999999886
Q ss_pred CceEEEEEcCCcccEEEEEe--CCCEEEEEeCC-----------CcEEEEECCCCee--eEEecCcccCeEEEEe--cCC
Q psy9182 386 SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD-----------NTIRLWDIECGAC--LRVLEGHEELVRCIRF--DAK 448 (486)
Q Consensus 386 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-----------g~v~iwd~~~~~~--~~~~~~h~~~v~~~~~--~~~ 448 (486)
.+..+..+..|...+..+.| ++++|++++.+ +.|++||+.+++. +..+.+|...+.+++| +++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 205 DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGD 284 (297)
T ss_dssp TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSS
T ss_pred CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCC
Confidence 55667778888888888887 47888888765 5699999998765 4445578888999999 888
Q ss_pred EEEEEeCCC
Q psy9182 449 RIVSGAYDG 457 (486)
Q Consensus 449 ~l~s~~~dg 457 (486)
+|++++.|.
T Consensus 285 ~l~~~~~~~ 293 (297)
T 2ojh_A 285 EFAYVRYFP 293 (297)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 888887654
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=1.2e-17 Score=171.48 Aligned_cols=319 Identities=12% Similarity=0.085 Sum_probs=200.8
Q ss_pred ccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT 184 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~ 184 (486)
..+.++.++|| ++++.+ .++.|++||+.+++... +..+...+.+++|+ +|++.|+++ .|+.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~S---------------pdG~~la~~-~~~~ 142 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFS---------------PVGDRVAYV-RNHN 142 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEEC---------------TTSSEEEEE-ETTE
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCC---------------CCCCEEEEE-ECCe
Confidence 46788899999 555555 45999999999886544 44566678888887 677778774 6899
Q ss_pred ceeeeccc-----ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe--------
Q psy9182 185 ILIWDFLN-----YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-------- 251 (486)
Q Consensus 185 i~vWd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-------- 251 (486)
|++||+.+ +............ + ..+.. ............+++|||++|++++
T Consensus 143 i~v~~~~~~~~~~g~~~~~~~~~~~~-------~----~~g~~----~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~ 207 (706)
T 2z3z_A 143 LYIARGGKLGEGMSRAIAVTIDGTET-------L----VYGQA----VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKP 207 (706)
T ss_dssp EEEEECBCTTSCCCCCEESCSCCBTT-------E----EESSC----CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCC
T ss_pred EEEEecCcccccCCCcEEeccCCCCC-------e----Ecccc----hhhhhcCCCceEEECCCCCEEEEEEECCCCCce
Confidence 99999876 4332211111000 0 00000 0000011234567899999999987
Q ss_pred -------------------------cCCeEEEEECCCceeeEEEc--CCcccEEEEEe--cCCEEEEEeCCC-----cEE
Q psy9182 252 -------------------------RDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQY--DERVIISGSSDS-----TVR 297 (486)
Q Consensus 252 -------------------------~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg-----~i~ 297 (486)
.+..|++||+.+++...... .|...+.+++| |++.|++++.++ .|.
T Consensus 208 ~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~ 287 (706)
T 2z3z_A 208 TPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVN 287 (706)
T ss_dssp EEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEE
T ss_pred EEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEE
Confidence 44689999999988655442 46677888888 888899887775 899
Q ss_pred EEECCCCcEEEEec-c-cCc---cEEEEEEcC--C--eEEEEeCCCcEEEEECC-CCCceeeEEeeecCcccEEE-EEe-
Q psy9182 298 VWDVNTGEMVNTLI-H-HCE---AVLHLRFSN--G--MMVTCSKDRSIAVWDMV-SPNEITLRRVLVGHRAAVNV-VDF- 365 (486)
Q Consensus 298 vwd~~~~~~~~~~~-~-~~~---~i~~~~~~~--~--~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~-~~~- 365 (486)
+||+.+++....+. . +.. .+..+.|++ + +++++..++.+++|++. ++... ..+..+...+.. +.|
T Consensus 288 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~---~~l~~~~~~v~~~~~~s 364 (706)
T 2z3z_A 288 AYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLI---RQVTKGEWEVTNFAGFD 364 (706)
T ss_dssp EEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEE---EECCCSSSCEEEEEEEC
T ss_pred EEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEE---EecCCCCeEEEeeeEEc
Confidence 99999984433332 2 121 235677876 4 77788889999999876 33322 344456666654 566
Q ss_pred -CCCEEEEEeC-CC----cEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCC----CcEEEEECCCCeeeEEe
Q psy9182 366 -DEKYIVSASG-DR----TIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD----NTIRLWDIECGACLRVL 433 (486)
Q Consensus 366 -~~~~l~~~~~-d~----~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~v~iwd~~~~~~~~~~ 433 (486)
+++.|+.++. ++ .|..||+.+++ ...+. +...+..+.+ ++++++....+ +.|++||+.+++ ...+
T Consensus 365 pdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~-~~~~ 441 (706)
T 2z3z_A 365 PKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS-HTLL 441 (706)
T ss_dssp TTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE-EEEE
T ss_pred CCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe-Eeec
Confidence 7777766554 44 67778887765 33443 5666777777 47777766443 569999999887 4333
Q ss_pred cCcccCeEEEEe-cCCEEEEEeCCC--cEEEEeC
Q psy9182 434 EGHEELVRCIRF-DAKRIVSGAYDG--KIKVWNL 464 (486)
Q Consensus 434 ~~h~~~v~~~~~-~~~~l~s~~~dg--~v~iwdl 464 (486)
. +...+....+ ....+...+.|| .+..|-.
T Consensus 442 ~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 474 (706)
T 2z3z_A 442 E-AKNPDTGYAMPEIRTGTIMAADGQTPLYYKLT 474 (706)
T ss_dssp E-CC------CCCCEEEEEEECTTSSSEEEEEEE
T ss_pred c-ccchhhhcCCCCcEEEEEEcCCCCEEEEEEEE
Confidence 3 3334444444 223333444566 5666554
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=5.5e-18 Score=175.08 Aligned_cols=296 Identities=9% Similarity=0.042 Sum_probs=195.9
Q ss_pred ccceeEEEeecceeEecCCCCceeccCcceeecCCC-CC-----cceeeecccccccccCCCCCCCCCCCCccccccccc
Q psy9182 146 KRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH-DD-----TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRM 219 (486)
Q Consensus 146 ~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~-dg-----~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (486)
...+..++|+ +|+++|++++. |+ .|++||+.++............. .+..+..
T Consensus 36 ~~~~~~~~~S---------------pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~--~~~~~~~---- 94 (741)
T 2ecf_A 36 GPTLMKPKVA---------------PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLP--GTETLSD---- 94 (741)
T ss_dssp CCCCEEEEEC---------------TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------
T ss_pred CCCCCCceEe---------------cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhccc--ccccccc----
Confidence 3468889997 68888888887 87 89999987765433222111000 0000000
Q ss_pred CceeEEEEeccCC-CccceEEEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCC
Q psy9182 220 GKFLLQRINCRSE-NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDS 294 (486)
Q Consensus 220 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 294 (486)
.....+....... ......+++|||++|++++. +.|++||+.++. ....+..|...+.+++| ||++|+.++ ++
T Consensus 95 ~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~ 172 (741)
T 2ecf_A 95 EEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GR 172 (741)
T ss_dssp ------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TT
T ss_pred hhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CC
Confidence 0000000000000 11345678999999999886 999999999873 34456667788888888 899998887 46
Q ss_pred cEEEEECCCCcEEEEecccCcc----------------EEEEEEcCC--eEEEEeCCC----------------------
Q psy9182 295 TVRVWDVNTGEMVNTLIHHCEA----------------VLHLRFSNG--MMVTCSKDR---------------------- 334 (486)
Q Consensus 295 ~i~vwd~~~~~~~~~~~~~~~~----------------i~~~~~~~~--~l~~~~~dg---------------------- 334 (486)
.|++||+.+++.......+... +..+.|+++ .|++++.|+
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 8999999988766544433332 367888865 677776655
Q ss_pred -----------cEEEEECCC-CCceeeEEeeecCcccEEEEEe-CCCEEEEEeC-----CCcEEEEECCCceEEEEEcCC
Q psy9182 335 -----------SIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF-DEKYIVSASG-----DRTIKVWNTSSCEFVRTLNGH 396 (486)
Q Consensus 335 -----------~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~ 396 (486)
.|.+||+.+ ++.... .....+...+..+.| ||++|+.++. +..|++||+.+++....+..+
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWI-DLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEE-CCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEe-cCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcC
Confidence 788999987 664321 111135566666665 8888887653 567999999999887776655
Q ss_pred cc----cEEEEEe--CCCEEEEEeCCCcEEEEECC-CCeeeEEecCcccCeEEE-Ee--cCCEEE-EEeCCC--cEEEEe
Q psy9182 397 KR----GIACLQY--RDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCI-RF--DAKRIV-SGAYDG--KIKVWN 463 (486)
Q Consensus 397 ~~----~v~~~~~--~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~h~~~v~~~-~~--~~~~l~-s~~~dg--~v~iwd 463 (486)
.. .+..+.| +|+++++++.||.++||.+. .++ ...+..|...|..+ .| +++.|+ +++.|+ .+++|+
T Consensus 332 ~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp CSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred CCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 43 2334444 68889999999988888775 355 77888888888877 47 788765 455555 899999
Q ss_pred CCC
Q psy9182 464 LVA 466 (486)
Q Consensus 464 l~~ 466 (486)
+..
T Consensus 411 ~~~ 413 (741)
T 2ecf_A 411 VPL 413 (741)
T ss_dssp EET
T ss_pred EEc
Confidence 865
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=8.3e-18 Score=156.21 Aligned_cols=257 Identities=11% Similarity=0.082 Sum_probs=178.1
Q ss_pred eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCC-ccceEEEEeCCCEEE-EEec
Q psy9182 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN-SKGVYCLQYDDHKIV-SGLR 252 (486)
Q Consensus 175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~-~~~~ 252 (486)
++++++.++.|.+||+.+.... ..+...... .....+++++++.++ ++..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~----------------------------~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 54 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVD----------------------------KVITIADAGPTPMVPMVAPGGRIAYATVNK 54 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEE----------------------------EEEECTTCTTCCCCEEECTTSSEEEEEETT
T ss_pred EEEEcCCCCeEEEEECCCCcEE----------------------------EEEEcCCCCCCccceEEcCCCCEEEEEeCC
Confidence 5788888999999997553321 112111110 234567888997664 5556
Q ss_pred CCeEEEEECCCceeeEEEcCCc-----ccEEEEEe--cCCEEEEEe------------CCCcEEEEECCCCcEEEEeccc
Q psy9182 253 DNTIKVWDRVSLQCIKVLTGHT-----GSVLCLQY--DERVIISGS------------SDSTVRVWDVNTGEMVNTLIHH 313 (486)
Q Consensus 253 dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~--~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~ 313 (486)
++.|.+||+.+++.+..+.... ..+.++.+ +++++++++ .++.|.+||+.+++.+..+..
T Consensus 55 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~- 133 (337)
T 1pby_B 55 SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA- 133 (337)
T ss_dssp TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-
T ss_pred CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-
Confidence 7899999999998887766321 13445555 788888886 579999999999988877765
Q ss_pred CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecC-cccEEEEEeCCCEEEEEeCCC-------------
Q psy9182 314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGH-RAAVNVVDFDEKYIVSASGDR------------- 377 (486)
Q Consensus 314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d~------------- 377 (486)
...+..+.++++ .++++ ++.|.+||+.+++...... .+. ...+ .+..++..++..+..+
T Consensus 134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~--~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 208 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKP--IQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTARKD 208 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEEC--STTTTTTT-BCCCBCCCCCCCCTTTTEEEEEEEEEBTT
T ss_pred CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeee--ccccCCCc-eeCCCccEEeeeccCCCceeeeeeccccc
Confidence 345677788754 56666 6899999998876442211 111 1222 3344666554433222
Q ss_pred -----------cEEEEECCCceEE-EEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEE
Q psy9182 378 -----------TIKVWNTSSCEFV-RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443 (486)
Q Consensus 378 -----------~i~iwd~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~ 443 (486)
.|.+||+.+++.. ..+..+...+..+.+ ++++++++ ++.|.+||+.+++.+..+..+ ..+.++
T Consensus 209 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~ 285 (337)
T 1pby_B 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSV 285 (337)
T ss_dssp SCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEE
T ss_pred cccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeE
Confidence 4789999998764 223445556766777 47888887 799999999999988887644 457788
Q ss_pred Ee--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 444 RF--DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 444 ~~--~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
+| ++++|++++.++.|++||+.++.
T Consensus 286 ~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 286 NVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred EECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 88 78899999999999999998764
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=1.1e-17 Score=167.69 Aligned_cols=265 Identities=11% Similarity=0.036 Sum_probs=180.6
Q ss_pred ccccccCCccCcceEEEeec-CceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC--
Q psy9182 105 RDFISLLPNFDEKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH-- 181 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~-dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~-- 181 (486)
..+.++.++|||++||+++. ||+++||++.+++..+....+...+..++|++ | ..+++++.
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~sp---------------d-~~l~~~~~~~ 85 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGV---------------G-RVILVRDVSK 85 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTC---------------S-EEEEEEECST
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCC---------------C-eEEEEeccCC
Confidence 35888899999999999887 99999999976665444444446888999974 3 33443332
Q ss_pred -CCcceeeeccc--ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE-EEEEecCCeEE
Q psy9182 182 -DDTILIWDFLN--YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK-IVSGLRDNTIK 257 (486)
Q Consensus 182 -dg~i~vWd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~dg~i~ 257 (486)
+....+|.++. ..... .+ .......+.+++++++. +++.+.++.+.
T Consensus 86 g~~~~~l~~~~~~~~g~~~----------------------------~l--~~~~~~~~~~~s~dg~~~~~~s~~~~~~~ 135 (582)
T 3o4h_A 86 GAEQHALFKVNTSRPGEEQ----------------------------RL--EAVKPMRILSGVDTGEAVVFTGATEDRVA 135 (582)
T ss_dssp TSCCEEEEEEETTSTTCCE----------------------------EC--TTSCSBEEEEEEECSSCEEEEEECSSCEE
T ss_pred CCcceEEEEEeccCCCccc----------------------------cc--cCCCCceeeeeCCCCCeEEEEecCCCCce
Confidence 44556766533 11100 00 11122336688998864 44444555566
Q ss_pred EEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCC----CcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEe
Q psy9182 258 VWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD----STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCS 331 (486)
Q Consensus 258 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~ 331 (486)
+||+.+++.......+. .-..++.||+.+++++.+ +.|++||+.+++.. .+..+...+..++|+|+ .++++.
T Consensus 136 l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 136 LYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLE 213 (582)
T ss_dssp EEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEE
T ss_pred EEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEcc
Confidence 99999988766555433 333445599999988877 78999999988765 56777888899999975 777778
Q ss_pred CCC--cEEEEECCCCCceeeEEeeecCcccEEEEE--------e--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCccc
Q psy9182 332 KDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVD--------F--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399 (486)
Q Consensus 332 ~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~--------~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 399 (486)
.++ .|++||+.+++.. ...++...+..+. | ||.++++++.++.+++|++ ++... .....
T Consensus 214 ~~~~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~ 284 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVE----DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGN 284 (582)
T ss_dssp CSSCEEEEEECTTTCCEE----ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSE
T ss_pred CCCeeEEEEEcCCCCcEE----EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCc
Confidence 888 8999999887643 3344544443333 4 8888999999999999999 66554 23355
Q ss_pred EEEEEe-CCCEEEEEeCCCc---EEEEECCC
Q psy9182 400 IACLQY-RDRLVVSGSSDNT---IRLWDIEC 426 (486)
Q Consensus 400 v~~~~~-~~~~l~~~~~dg~---v~iwd~~~ 426 (486)
+.++++ +++++++++.+.. +.+||..+
T Consensus 285 v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 285 HGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEETTCC
T ss_pred eEEEEecCCEEEEEEcCCCCCCeEEEEcCCC
Confidence 655555 5778888777744 66777653
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=5.6e-18 Score=174.39 Aligned_cols=313 Identities=11% Similarity=0.043 Sum_probs=202.2
Q ss_pred cccCCccCcceEEEeecCceeeecccccccceeeecCccc---ceeEEEeecceeEecCCCCceeccCcceeecCCC---
Q psy9182 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH--- 181 (486)
Q Consensus 108 ~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~---~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~--- 181 (486)
....++|||++++++ .||.|++||+.+++....+.+|.. .+.+++|+ +|+++|++++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~S---------------pDg~~la~~~~~~~ 82 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLS---------------PDRQFVYLESDYSK 82 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEEC---------------TTSSEEEEEEEEEE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEEC---------------CCCCeEEEEecCce
Confidence 366889999766655 699999999999998877777654 38899997 57777777765
Q ss_pred ------CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182 182 ------DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255 (486)
Q Consensus 182 ------dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~ 255 (486)
++.|++||+.++........ .......+++|||+.|+.+. ++.
T Consensus 83 ~~~~s~~~~i~~~d~~~g~~~~~~~l------------------------------~~~~~~~~~SPDG~~la~~~-~~~ 131 (719)
T 1z68_A 83 LWRYSYTATYYIYDLSNGEFVRGNEL------------------------------PRPIQYLCWSPVGSKLAYVY-QNN 131 (719)
T ss_dssp CSSSCEEEEEEEEETTTTEECCSSCC------------------------------CSSBCCEEECSSTTCEEEEE-TTE
T ss_pred eEEeecceEEEEEECCCCccccceec------------------------------CcccccceECCCCCEEEEEE-CCe
Confidence 78999999876543110000 01233467899999999885 789
Q ss_pred EEEEECCCceeeEEE-cCCcccE-----------------EEEEe--cCCEEEEEeCCC---------------------
Q psy9182 256 IKVWDRVSLQCIKVL-TGHTGSV-----------------LCLQY--DERVIISGSSDS--------------------- 294 (486)
Q Consensus 256 i~i~d~~~~~~~~~~-~~~~~~v-----------------~~~~~--~~~~l~~~~~dg--------------------- 294 (486)
|++||+.+++..... .++...+ .++.| ||+.|++++.|.
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 999999888765433 2222222 25666 899999887652
Q ss_pred -------------cEEEEECCCCcEE--EE------ecccCccEEEEEEcCC--eEEEEeCC----CcEEEEE----CCC
Q psy9182 295 -------------TVRVWDVNTGEMV--NT------LIHHCEAVLHLRFSNG--MMVTCSKD----RSIAVWD----MVS 343 (486)
Q Consensus 295 -------------~i~vwd~~~~~~~--~~------~~~~~~~i~~~~~~~~--~l~~~~~d----g~i~i~d----~~~ 343 (486)
.|++||+.+++.. .. +..+...+..++|+++ .+++.... ..|.+|| +.+
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 291 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT 291 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC
Confidence 7889999887642 11 2346777899999876 33443322 2488899 766
Q ss_pred CCceeeEE-eeecCcccEE-----EEEe--CCCEEEE--EeCCC--cEEEEECCCceEEEEEcCCcccEEEEE-eCCCEE
Q psy9182 344 PNEITLRR-VLVGHRAAVN-----VVDF--DEKYIVS--ASGDR--TIKVWNTSSCEFVRTLNGHKRGIACLQ-YRDRLV 410 (486)
Q Consensus 344 ~~~~~~~~-~~~~~~~~v~-----~~~~--~~~~l~~--~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~-~~~~~l 410 (486)
++...... ...++...+. .+.| ||+.++. ...+| .|.+||+.+++ ...+..+...+..+. ++++.|
T Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~d~~~i 370 (719)
T 1z68_A 292 WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRVTQDSL 370 (719)
T ss_dssp EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEECSSEE
T ss_pred CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEEeCCEE
Confidence 54332221 0024444443 4445 7775543 44555 57778887766 455555555554322 277777
Q ss_pred EEEeCC-----CcEEEEECCC--Ce-eeEEec----CcccCeEEEEe--cCCEEEE-EeCC--CcEEEEeCCCCC
Q psy9182 411 VSGSSD-----NTIRLWDIEC--GA-CLRVLE----GHEELVRCIRF--DAKRIVS-GAYD--GKIKVWNLVAAL 468 (486)
Q Consensus 411 ~~~~~d-----g~v~iwd~~~--~~-~~~~~~----~h~~~v~~~~~--~~~~l~s-~~~d--g~v~iwdl~~~~ 468 (486)
+..+.+ +.+++|.+.. +. ....+. +|...+..+.| ++++++. ++.+ ..+.+||+.++.
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred EEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 666654 7888998754 42 123333 26667888888 6777664 4433 468899886553
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=2.1e-16 Score=147.46 Aligned_cols=276 Identities=11% Similarity=0.078 Sum_probs=177.1
Q ss_pred ccCCccCcceEEEeecCceeeecccccccceeeecCcc-cceeEEEeecceeEecCCCCceeccCcce-eecCCCCCcce
Q psy9182 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYRDEFQ-IVSSSHDDTIL 186 (486)
Q Consensus 109 ~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~-~~V~~~~~~~~~~~~~~~d~~i~~~~~~~-l~s~s~dg~i~ 186 (486)
.+++++++.++++++.++.|++||..+++.+..+..+. ..+..++|+ +++.. +++...++.|.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s---------------~dg~~~~v~~~~~~~i~ 68 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMA---------------PDNRTAYVLNNHYGDIY 68 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEEC---------------TTSSEEEEEETTTTEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEEC---------------CCCCEEEEEeCCCCcEE
Confidence 45678889999999999999999999999888887543 246677776 45543 45666789999
Q ss_pred eeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccC-----CCccceEEEEeCCCEEEEEecC--------
Q psy9182 187 IWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS-----ENSKGVYCLQYDDHKIVSGLRD-------- 253 (486)
Q Consensus 187 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~d-------- 253 (486)
+||+.+..... .+.... ......++++++++++++++.+
T Consensus 69 ~~d~~t~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 69 GIDLDTCKNTF----------------------------HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp EEETTTTEEEE----------------------------EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred EEeCCCCcEEE----------------------------EEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 99986543221 111100 1113446788899999998865
Q ss_pred ----CeEEEEECCCce---eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCc---------
Q psy9182 254 ----NTIKVWDRVSLQ---CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE--------- 315 (486)
Q Consensus 254 ----g~i~i~d~~~~~---~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--------- 315 (486)
+.|.+||+.+++ .+..+..+ ..+.++++ +++ +++++ +.|.+||+.+++.+..+..+..
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPD 196 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCB
T ss_pred ccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcc
Confidence 899999998843 33444433 35666666 777 55554 3499999999988877654320
Q ss_pred ---------------cEEEEEEcCCe---EEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEE--e-CCCEEEEEe
Q psy9182 316 ---------------AVLHLRFSNGM---MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD--F-DEKYIVSAS 374 (486)
Q Consensus 316 ---------------~i~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~ 374 (486)
....+.+.++- .........+..+|..+++.... . ...+...+..+. . ++++++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~sp~dg~~l~~~- 273 (349)
T 1jmx_B 197 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ-E-FADLTELYFTGLRSPKDPNQIYGV- 273 (349)
T ss_dssp CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEE-E-EEECSSCEEEEEECSSCTTEEEEE-
T ss_pred ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEec-c-cccCCCcceeeEecCCCCCEEEEE-
Confidence 12223333110 00000001122244444332111 1 111233344444 4 77888888
Q ss_pred CCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCc
Q psy9182 375 GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436 (486)
Q Consensus 375 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h 436 (486)
++.|.+||+.+++.+..+.... .+.++.+ ++++|++++.++.|.+||+++++.+..+...
T Consensus 274 -~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 274 -LNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp -ESEEEEEETTTTEEEEEEECSS-CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred -cCeEEEEECccCeEEEEEcCCC-CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 7899999999999888876433 3445665 5778888888999999999999988887654
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.76 E-value=9.6e-16 Score=147.04 Aligned_cols=203 Identities=13% Similarity=0.084 Sum_probs=142.6
Q ss_pred cccccCCccCcceEEEeecCceeeecccccccc----------eee-----ecCcccceeEEEeecceeEecCCCCceec
Q psy9182 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF----------VRT-----LNGHKRGIACLQYRDRLVVSGSSDNTIRY 170 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~----------~~~-----l~~h~~~V~~~~~~~~~~~~~~~d~~i~~ 170 (486)
.+..+++++++.++++++.|| ++||+...... +.. ...|...|.+++|+
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s--------------- 101 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALS--------------- 101 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEEC---------------
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEc---------------
Confidence 466778888999999999988 88887542111 111 11345679999997
Q ss_pred cCcceee----cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEE--EeC-
Q psy9182 171 RDEFQIV----SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCL--QYD- 243 (486)
Q Consensus 171 ~~~~~l~----s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~- 243 (486)
+++.+|+ +++.|+.|++||+.+....... ....+..+....+|...+.++ +|+
T Consensus 102 pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~--------------------~~~~~~~~~~~~~h~~~V~~v~~~p~~ 161 (434)
T 2oit_A 102 CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ--------------------QKRPFAYHKLLKDAGGMVIDMKWNPTV 161 (434)
T ss_dssp TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS--------------------SCCCSEEEECCCSGGGSEEEEEECSSC
T ss_pred CCCCEEEEEEeccCCCceEEEEEccccccCCcC--------------------CcceeeeeeccCCCCCceEEEEECCCC
Confidence 5777788 8999999999998664210000 000011122223345555554 455
Q ss_pred CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc-------C
Q psy9182 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH-------C 314 (486)
Q Consensus 244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-------~ 314 (486)
+.+|++++.||+|++||++++.......+|...|.+++| ++++|++|+.||.|++||++ ++....+..+ .
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~ 240 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHP 240 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSC
T ss_pred CCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCc
Confidence 679999999999999999998877777789999999999 78999999999999999998 6666665433 2
Q ss_pred ccEEEEEEcCC-eEE--EEeCCC------cEEEEECCCCC
Q psy9182 315 EAVLHLRFSNG-MMV--TCSKDR------SIAVWDMVSPN 345 (486)
Q Consensus 315 ~~i~~~~~~~~-~l~--~~~~dg------~i~i~d~~~~~ 345 (486)
..+.++.|+++ .++ ....+| .+++|++++.+
T Consensus 241 ~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 241 VRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred eeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 37899999866 333 234443 38999998653
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.76 E-value=1.5e-15 Score=142.01 Aligned_cols=227 Identities=12% Similarity=0.107 Sum_probs=166.2
Q ss_pred ceEEEEeCCCEEEEEec-------CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCcEEEEECCCCc
Q psy9182 236 GVYCLQYDDHKIVSGLR-------DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDSTVRVWDVNTGE 305 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~vwd~~~~~ 305 (486)
.-.+++++++++++++. ++.|.+||..+++.+..+.... .+..+.+ +++.++ +...++.|.+||..+++
T Consensus 44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 122 (353)
T 3vgz_A 44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE 122 (353)
T ss_dssp EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEEEeCCCCe
Confidence 34678889998888774 5689999999999888776432 3444444 777555 44557999999999999
Q ss_pred EEEEecccCcc---------EEEEEEcCC--eEEEEe--CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEE
Q psy9182 306 MVNTLIHHCEA---------VLHLRFSNG--MMVTCS--KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI 370 (486)
Q Consensus 306 ~~~~~~~~~~~---------i~~~~~~~~--~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l 370 (486)
.+..+..+... +..+.++++ .++++. .++.|.+||+.+++... ....+...+..+.+ +++++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 123 VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT---AIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE---EECCCCTTCCCCEEETTTTEE
T ss_pred eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE---EecCCCCccceEEECCCCCEE
Confidence 88887654322 678888754 566555 47889999998876543 22223333444444 89999
Q ss_pred EEEeCCCcEEEEECCCceEEEEEcC----CcccEEEEEe--CCCEEEEEeC-CCcEEEEECCCCeeeEEecCcccCeEEE
Q psy9182 371 VSASGDRTIKVWNTSSCEFVRTLNG----HKRGIACLQY--RDRLVVSGSS-DNTIRLWDIECGACLRVLEGHEELVRCI 443 (486)
Q Consensus 371 ~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~--~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~ 443 (486)
++++.++.|.+||..+++.+..+.. +...+..+.+ +++++++++. ++.|.+||+.+++.+..+..... ..+
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~ 277 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAV 277 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCE
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceE
Confidence 9999999999999999998887764 4445665665 5777666664 59999999999998888775443 456
Q ss_pred Ee--cCCEEEEEe-CCCcEEEEeCCCCC
Q psy9182 444 RF--DAKRIVSGA-YDGKIKVWNLVAAL 468 (486)
Q Consensus 444 ~~--~~~~l~s~~-~dg~v~iwdl~~~~ 468 (486)
+| +++++++++ .++.|.+||+.++.
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 66 888666555 68999999998654
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.76 E-value=3.5e-15 Score=140.06 Aligned_cols=290 Identities=11% Similarity=0.152 Sum_probs=176.0
Q ss_pred ccCcceEEEee----cCceeeeccc--ccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC----
Q psy9182 113 NFDEKYIVSAS----GDRTIKVWNT--SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD---- 182 (486)
Q Consensus 113 s~~~~~l~tg~----~dg~v~iWd~--~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d---- 182 (486)
.+...+++.|+ .++.|.+|++ .++++......+......++|+ +|+++|++++.+
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~s---------------pdg~~l~~~~~~~~~~ 74 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPS---------------ADGKFVYSVNEFSKDQ 74 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEEC---------------TTSSEEEEEECCSSTT
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEEC---------------CCCCEEEEEEccCCCC
Confidence 34455666764 4678999976 4555433222266677778887 566667766664
Q ss_pred CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCCeEEEEEC
Q psy9182 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDNTIKVWDR 261 (486)
Q Consensus 183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~ 261 (486)
+.+.+|+++... + .+..+............++++++++++++ .++.|.+|++
T Consensus 75 ~~v~~~~~~~~~-------------------------g--~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~ 127 (361)
T 3scy_A 75 AAVSAFAFDKEK-------------------------G--TLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPI 127 (361)
T ss_dssp CEEEEEEEETTT-------------------------T--EEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEB
T ss_pred CcEEEEEEeCCC-------------------------C--cEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEe
Confidence 799999985421 0 01111111112223344445888877776 5789999998
Q ss_pred CCceeeEE----E--cC--------CcccEEEEEe--cCCEEEEEe-CCCcEEEEECCCCc-------EE------EEec
Q psy9182 262 VSLQCIKV----L--TG--------HTGSVLCLQY--DERVIISGS-SDSTVRVWDVNTGE-------MV------NTLI 311 (486)
Q Consensus 262 ~~~~~~~~----~--~~--------~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~~~-------~~------~~~~ 311 (486)
.....+.. + .+ +...+.++.+ +++++++++ .++.|.+|++.... .. ....
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV 207 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence 75432211 1 11 1223456666 788666555 47899999887533 11 1122
Q ss_pred ccCccEEEEEEcCC--eEEEEe-CCCcEEEEECCCCCceeeE--EeeecCcccEEEEEe--CCCEEEEEeCC--CcEEEE
Q psy9182 312 HHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMVSPNEITLR--RVLVGHRAAVNVVDF--DEKYIVSASGD--RTIKVW 382 (486)
Q Consensus 312 ~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~~~~~~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~~d--~~i~iw 382 (486)
........++|+++ .+++++ .++.|.+||+.++...... .....+......+.+ +|++|+++..+ +.|.+|
T Consensus 208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~ 287 (361)
T 3scy_A 208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIF 287 (361)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence 33456788999875 566666 6899999999865432111 112223334566666 88988776654 899999
Q ss_pred ECC--Cce--EEEEEcCCcccEEEEEe--CCCEEEEEe-CCCcEEEEE--CCCCeeeEEe-cCcccCeEEEEe
Q psy9182 383 NTS--SCE--FVRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRLWD--IECGACLRVL-EGHEELVRCIRF 445 (486)
Q Consensus 383 d~~--~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~v~iwd--~~~~~~~~~~-~~h~~~v~~~~~ 445 (486)
++. +++ .+..+.. ...+..+++ ++++|++++ .++.|.+|+ .++++..... ..+...+.|+.|
T Consensus 288 ~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~ 359 (361)
T 3scy_A 288 KVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF 359 (361)
T ss_dssp EECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred EEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence 985 444 4445554 445556666 588888887 678999964 4567655443 224456888887
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.75 E-value=2.6e-17 Score=157.93 Aligned_cols=208 Identities=12% Similarity=0.143 Sum_probs=148.1
Q ss_pred CeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCC----------cEEEEe-----cccCccEE
Q psy9182 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTG----------EMVNTL-----IHHCEAVL 318 (486)
Q Consensus 254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~----------~~~~~~-----~~~~~~i~ 318 (486)
+.+++|+.... +........+++.++.++++++.+| +++|+.... ..+... ..+...|.
T Consensus 23 ~~vri~~~~~~-----~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (434)
T 2oit_A 23 KKVRIFDSPEE-----LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH 96 (434)
T ss_dssp CEEECSCCCSS-----CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred eeEEecCCccc-----cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence 46777764321 1112223344444678888888887 888764210 011111 12456799
Q ss_pred EEEEcCC--eEE----EEeCCCcEEEEECCCC--------CceeeEEeeecCcccEEEEEe--C-CCEEEEEeCCCcEEE
Q psy9182 319 HLRFSNG--MMV----TCSKDRSIAVWDMVSP--------NEITLRRVLVGHRAAVNVVDF--D-EKYIVSASGDRTIKV 381 (486)
Q Consensus 319 ~~~~~~~--~l~----~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~~d~~i~i 381 (486)
+++|+++ +++ +++.|+.|++||+.+. +.........+|...|.++.| + +.+|++++.||+|++
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence 9999864 677 6778999999998754 222334556779999999999 3 679999999999999
Q ss_pred EECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCc-------ccCeEEEEe--cCCEE
Q psy9182 382 WNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH-------EELVRCIRF--DAKRI 450 (486)
Q Consensus 382 wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-------~~~v~~~~~--~~~~l 450 (486)
||++++..+....+|...+.+++|+ +++|++|+.||.|++||++ ++....+..| ...|.+++| ++.++
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 9999998777777899999999995 8899999999999999998 6666666544 237899999 44444
Q ss_pred EE-EeCCCc------EEEEeCCCCC
Q psy9182 451 VS-GAYDGK------IKVWNLVAAL 468 (486)
Q Consensus 451 ~s-~~~dg~------v~iwdl~~~~ 468 (486)
++ ++.||. +++|++....
T Consensus 256 ~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 256 IVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEccCCCccCCCCceEEEEeccCC
Confidence 33 444543 8999998653
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=2.5e-15 Score=140.23 Aligned_cols=231 Identities=12% Similarity=0.186 Sum_probs=152.5
Q ss_pred cceEEEEeCCCEEEEEec---CCeEEEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECC-CCc
Q psy9182 235 KGVYCLQYDDHKIVSGLR---DNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVN-TGE 305 (486)
Q Consensus 235 ~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~-~~~ 305 (486)
...++++++++ +++++. ++.|.+||+.+++ .+..+..+...+..+++ ++++|++++ .++.|.+||+. ++.
T Consensus 42 p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~ 120 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA 120 (347)
T ss_dssp CCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC
T ss_pred cceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC
Confidence 34577889998 555544 6899999997765 34444445556666665 788888887 67999999996 333
Q ss_pred --EEEEeccc---------CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEe--CCCE
Q psy9182 306 --MVNTLIHH---------CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDF--DEKY 369 (486)
Q Consensus 306 --~~~~~~~~---------~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~ 369 (486)
.+..+... ...+.+++++++ .+++...++.|.+||+............ .........+.| +|++
T Consensus 121 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~ 200 (347)
T 3hfq_A 121 LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY 200 (347)
T ss_dssp EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE
T ss_pred eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE
Confidence 23333221 124778899854 5555566889999999833222222221 222234555666 7886
Q ss_pred EEE-EeCCCcEEEEECCC--ceE--EEEEcCCc------ccEEEEEe--CCCEE-EEEeCCCcEEEEECC---CCeeeEE
Q psy9182 370 IVS-ASGDRTIKVWNTSS--CEF--VRTLNGHK------RGIACLQY--RDRLV-VSGSSDNTIRLWDIE---CGACLRV 432 (486)
Q Consensus 370 l~~-~~~d~~i~iwd~~~--~~~--~~~~~~~~------~~v~~~~~--~~~~l-~~~~~dg~v~iwd~~---~~~~~~~ 432 (486)
+++ ...++.|.+|++.. ++. +..+.... ..+..+.+ +|++| ++...++.|.+|++. +.+.+..
T Consensus 201 l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 201 AFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 665 45678999999874 543 33333322 23666666 57776 556678999999997 2355666
Q ss_pred ecCcccCeEEEEe--cCCEEEEEeCC-CcEEEEeCCC
Q psy9182 433 LEGHEELVRCIRF--DAKRIVSGAYD-GKIKVWNLVA 466 (486)
Q Consensus 433 ~~~h~~~v~~~~~--~~~~l~s~~~d-g~v~iwdl~~ 466 (486)
+..+...+..++| |+++|++++.+ +.|.+|+++.
T Consensus 281 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 281 ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 6666677889999 88888888765 8999996653
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=5.9e-15 Score=137.74 Aligned_cols=264 Identities=14% Similarity=0.178 Sum_probs=164.9
Q ss_pred cCceeeecccc--ccccee-eecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC---CCcceeeecccccccc
Q psy9182 124 GDRTIKVWNTS--SCEFVR-TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH---DDTILIWDFLNYSETP 197 (486)
Q Consensus 124 ~dg~v~iWd~~--~~~~~~-~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~---dg~i~vWd~~~~~~~~ 197 (486)
.++.|.+|++. +++... ....+......++|+ +|++ +++++. ++.|.+|++.++...
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~s---------------pdg~-l~~~~~~~~~~~v~~~~~~~g~~~- 76 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALS---------------AKDC-LYSVDKEDDEGGIAAWQIDGQTAH- 76 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEEC---------------TTCE-EEEEEEETTEEEEEEEEEETTEEE-
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEc---------------cCCe-EEEEEecCCCceEEEEEecCCcEE-
Confidence 35667777764 455433 233445567778886 4565 444433 689999998543211
Q ss_pred cCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCCeEEEEECC---CceeeEEEcCC
Q psy9182 198 IQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDNTIKVWDRV---SLQCIKVLTGH 273 (486)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~---~~~~~~~~~~~ 273 (486)
.+..+.. ......-+++++++++|++++ .++.|.+|++. ..+.+..+...
T Consensus 77 -------------------------~~~~~~~-~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~ 130 (347)
T 3hfq_A 77 -------------------------KLNTVVA-PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHS 130 (347)
T ss_dssp -------------------------EEEEEEE-ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECC
T ss_pred -------------------------Eeeeeec-CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecC
Confidence 1111111 123344577899999888887 77899999986 23333333321
Q ss_pred ---------cccEEEEEe--cCCEEEEEeCCCcEEEEECC-CCcEEE--Eecc-cCccEEEEEEcCC--eEEE-EeCCCc
Q psy9182 274 ---------TGSVLCLQY--DERVIISGSSDSTVRVWDVN-TGEMVN--TLIH-HCEAVLHLRFSNG--MMVT-CSKDRS 335 (486)
Q Consensus 274 ---------~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~-~~~~~~--~~~~-~~~~i~~~~~~~~--~l~~-~~~dg~ 335 (486)
...+.++++ +++++++...++.|.+||+. +++... .+.. .......++|+++ .+++ ...++.
T Consensus 131 ~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~ 210 (347)
T 3hfq_A 131 GHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ 210 (347)
T ss_dssp CCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE
Confidence 123666777 77866666678899999998 554432 2222 2335778899865 4554 567889
Q ss_pred EEEEECCCC-CceeeEEeeecCc------ccEEEEEe--CCCEE-EEEeCCCcEEEEECC---CceEEEEEcCCcccEEE
Q psy9182 336 IAVWDMVSP-NEITLRRVLVGHR------AAVNVVDF--DEKYI-VSASGDRTIKVWNTS---SCEFVRTLNGHKRGIAC 402 (486)
Q Consensus 336 i~i~d~~~~-~~~~~~~~~~~~~------~~v~~~~~--~~~~l-~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~v~~ 402 (486)
|.+|++... ............. ..+..+.+ +|++| ++...++.|.+||+. ..+.+..+..+...+..
T Consensus 211 v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~ 290 (347)
T 3hfq_A 211 IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRD 290 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCE
T ss_pred EEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCe
Confidence 999998752 2222222222221 34666766 78877 455668999999987 33556666666666667
Q ss_pred EEe--CCCEEEEEeC-CCcEEEE--ECCCCeee
Q psy9182 403 LQY--RDRLVVSGSS-DNTIRLW--DIECGACL 430 (486)
Q Consensus 403 ~~~--~~~~l~~~~~-dg~v~iw--d~~~~~~~ 430 (486)
+++ ++++|++++. ++.|.+| |.++|+..
T Consensus 291 ~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 291 FDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 777 4788888775 4899999 55566654
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=1.2e-14 Score=136.42 Aligned_cols=233 Identities=8% Similarity=0.092 Sum_probs=155.9
Q ss_pred CccceEEEEeCCCEEEEEecC----CeEEEEECCC--ce--eeEEEcCCcccEEEEEecCCEEEEEe-CCCcEEEEECCC
Q psy9182 233 NSKGVYCLQYDDHKIVSGLRD----NTIKVWDRVS--LQ--CIKVLTGHTGSVLCLQYDERVIISGS-SDSTVRVWDVNT 303 (486)
Q Consensus 233 ~~~~v~~~~~~~~~l~~~~~d----g~i~i~d~~~--~~--~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~ 303 (486)
....-+++++++++|++++.+ +.|.+|++.. ++ .+.....+......++++++++++++ .++.|.+|++..
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCT
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCC
Confidence 344457789999999998876 7999998765 44 33444445556777777888877776 578999999975
Q ss_pred CcEEEEe------cc--------cCccEEEEEEcCC--eEEEEe-CCCcEEEEECCCCCc------eee----EEeeecC
Q psy9182 304 GEMVNTL------IH--------HCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMVSPNE------ITL----RRVLVGH 356 (486)
Q Consensus 304 ~~~~~~~------~~--------~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~~~~~------~~~----~~~~~~~ 356 (486)
...+..+ .+ +...+.+++|+++ .++++. .++.|.+|++..... +.. .......
T Consensus 130 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 209 (361)
T 3scy_A 130 DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP 209 (361)
T ss_dssp TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT
T ss_pred CCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC
Confidence 4322111 11 1223577888865 455544 588999999876542 211 1222233
Q ss_pred cccEEEEEe--CCCEEEEEe-CCCcEEEEECCCceE--EEEEc---CCcccEEEEEe--CCCEEEEEeCC--CcEEEEEC
Q psy9182 357 RAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSSCEF--VRTLN---GHKRGIACLQY--RDRLVVSGSSD--NTIRLWDI 424 (486)
Q Consensus 357 ~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~~~~--~~~~~---~~~~~v~~~~~--~~~~l~~~~~d--g~v~iwd~ 424 (486)
......+.| +++++++++ .++.|.+||+.+++. +..+. .+......+.+ ++++|+++..+ +.|.+|++
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 445566777 788887777 689999999987754 33333 23344566666 58888776654 89999999
Q ss_pred C--CCe--eeEEecCcccCeEEEEe--cCCEEEEEe-CCCcEEEEeCCC
Q psy9182 425 E--CGA--CLRVLEGHEELVRCIRF--DAKRIVSGA-YDGKIKVWNLVA 466 (486)
Q Consensus 425 ~--~~~--~~~~~~~h~~~v~~~~~--~~~~l~s~~-~dg~v~iwdl~~ 466 (486)
. +++ .+..+.. ...+.+++| ||++|++++ .++.|.+|+++.
T Consensus 290 ~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 290 DETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp CTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred cCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 5 454 4444444 456788899 888888887 678999976653
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=4.6e-16 Score=145.17 Aligned_cols=222 Identities=12% Similarity=0.047 Sum_probs=159.2
Q ss_pred EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCc-ccEEEEEe--cCCEEE-EEeCCCcEEEEECCCCcEEEEecccC-
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT-GSVLCLQY--DERVII-SGSSDSTVRVWDVNTGEMVNTLIHHC- 314 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~- 314 (486)
+++++.++++++.++.|.+||..+++.+..+..+. ..+..+.+ +++.++ ++..++.|.+||+.+++.+..+....
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 34567788999999999999999999988887543 13455555 777654 55568999999999998887765332
Q ss_pred -----ccEEEEEEcCC--eEEEEeCC------------CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE
Q psy9182 315 -----EAVLHLRFSNG--MMVTCSKD------------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA 373 (486)
Q Consensus 315 -----~~i~~~~~~~~--~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~ 373 (486)
..+..++++++ .+++++.+ +.|.+||+.+++.......... ...+.++.+ +++ ++++
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~ 164 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVA 164 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEE
T ss_pred cccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEc
Confidence 23567788764 77777754 8999999987543332222222 234566666 777 5555
Q ss_pred eCCCcEEEEECCCceEEEEEcCCc-------------------------c------------------------------
Q psy9182 374 SGDRTIKVWNTSSCEFVRTLNGHK-------------------------R------------------------------ 398 (486)
Q Consensus 374 ~~d~~i~iwd~~~~~~~~~~~~~~-------------------------~------------------------------ 398 (486)
+ +.|.+||+.+++.+..+..+. .
T Consensus 165 ~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 242 (349)
T 1jmx_B 165 G--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 242 (349)
T ss_dssp S--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTT
T ss_pred c--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccC
Confidence 4 349999999998877765432 0
Q ss_pred -------------cEEEE--Ee-CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182 399 -------------GIACL--QY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIK 460 (486)
Q Consensus 399 -------------~v~~~--~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~ 460 (486)
.+..+ +. ++++++++ ++.|.+||+.+++.+..+... ..+.+++| ++++|++++.++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~ 319 (349)
T 1jmx_B 243 GKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLA 319 (349)
T ss_dssp CCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEE
T ss_pred CcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEE
Confidence 11111 24 67788877 889999999999988877643 34678888 788888888899999
Q ss_pred EEeCCCCC
Q psy9182 461 VWNLVAAL 468 (486)
Q Consensus 461 iwdl~~~~ 468 (486)
+||+.+..
T Consensus 320 v~d~~~~~ 327 (349)
T 1jmx_B 320 VFNPDTLE 327 (349)
T ss_dssp EEETTTTE
T ss_pred EEeccccc
Confidence 99998654
No 156
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=2.2e-16 Score=162.69 Aligned_cols=266 Identities=8% Similarity=0.032 Sum_probs=174.5
Q ss_pred cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCC--CccceEEEEeCCCEEE
Q psy9182 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSE--NSKGVYCLQYDDHKIV 248 (486)
Q Consensus 171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l~ 248 (486)
+|+.++++ +.||+|++||+.++....... .... ......+++|||++|+
T Consensus 26 pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~----------------------------~~~~~~~~v~~~~~SpDg~~l~ 76 (723)
T 1xfd_A 26 SDTEFIYR-EQKGTVRLWNVETNTSTVLIE----------------------------GKKIESLRAIRYEISPDREYAL 76 (723)
T ss_dssp SSSCBCCC-CSSSCEEEBCGGGCCCEEEEC----------------------------TTTTTTTTCSEEEECTTSSEEE
T ss_pred CCCcEEEE-eCCCCEEEEECCCCcEEEEec----------------------------cccccccccceEEECCCCCEEE
Confidence 56665655 789999999987654322111 1111 1245577899999999
Q ss_pred EEecC---------CeEEEEECCCceeeEEEc---CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182 249 SGLRD---------NTIKVWDRVSLQCIKVLT---GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC 314 (486)
Q Consensus 249 ~~~~d---------g~i~i~d~~~~~~~~~~~---~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 314 (486)
+++.+ +.+.+||+.+++. ..+. +|...+..++| ||+.|+.++. +.|++||+.+++.......+.
T Consensus 77 ~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~ 154 (723)
T 1xfd_A 77 FSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK 154 (723)
T ss_dssp EEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB
T ss_pred EEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC
Confidence 99774 7888999998876 3333 33334666666 8999998876 789999999888766555433
Q ss_pred ccE------------------EEEEEcCC--eEEEEeCCC----------------------------------cEEEEE
Q psy9182 315 EAV------------------LHLRFSNG--MMVTCSKDR----------------------------------SIAVWD 340 (486)
Q Consensus 315 ~~i------------------~~~~~~~~--~l~~~~~dg----------------------------------~i~i~d 340 (486)
..+ .++.|+|+ .|++++.++ .|++||
T Consensus 155 ~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d 234 (723)
T 1xfd_A 155 EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG 234 (723)
T ss_dssp TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE
T ss_pred CCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE
Confidence 322 68999875 677766442 799999
Q ss_pred CCCCCceeeEEe---eecCcccEEEEEe--CCCEEEEEeC----CCcEEEEECCCceEEEEEcCC-cccE----EEEEe-
Q psy9182 341 MVSPNEITLRRV---LVGHRAAVNVVDF--DEKYIVSASG----DRTIKVWNTSSCEFVRTLNGH-KRGI----ACLQY- 405 (486)
Q Consensus 341 ~~~~~~~~~~~~---~~~~~~~v~~~~~--~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~-~~~v----~~~~~- 405 (486)
+.+++....... ...+...+..+.| ||+++++... +..|++||+.+++....+..+ ...+ ..+.|
T Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 314 (723)
T 1xfd_A 235 LNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFS 314 (723)
T ss_dssp SSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEEC
T ss_pred CCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEc
Confidence 988764221110 1113567777888 7888876643 357999999999877665432 2222 13444
Q ss_pred -CCCEEEE--EeCCC------cEEEEE-CCCCe--eeEEecCcccCeEE-EEe--cCCEEEEEeCC---CcEEEEeCCCC
Q psy9182 406 -RDRLVVS--GSSDN------TIRLWD-IECGA--CLRVLEGHEELVRC-IRF--DAKRIVSGAYD---GKIKVWNLVAA 467 (486)
Q Consensus 406 -~~~~l~~--~~~dg------~v~iwd-~~~~~--~~~~~~~h~~~v~~-~~~--~~~~l~s~~~d---g~v~iwdl~~~ 467 (486)
+|+.|+. +..++ .|.+|| ..+++ +...+..+...+.. ++| |++.|+..+.+ +.+++|+++..
T Consensus 315 pdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 315 KDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp TTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred CCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 6776654 45677 577777 34444 14555544444544 577 89998766655 78999998754
No 157
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.73 E-value=1e-14 Score=136.44 Aligned_cols=284 Identities=14% Similarity=0.136 Sum_probs=188.7
Q ss_pred ccCcceEEEee------cCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC------
Q psy9182 113 NFDEKYIVSAS------GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS------ 180 (486)
Q Consensus 113 s~~~~~l~tg~------~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s------ 180 (486)
.++++++.... .|+.|.+||..+++.+.++..+..+ .++|+ +|+++++++.
T Consensus 12 ~~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~s---------------pdg~~lyv~~~~~~~~ 74 (361)
T 2oiz_A 12 APQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVS---------------NDGKKIYTMTTYHERI 74 (361)
T ss_dssp SCGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEEC---------------TTSSEEEEEEEEETTS
T ss_pred CCCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEEC---------------CCCCEEEEEEeccccc
Confidence 35677666643 4789999999999999888877655 77886 4666665553
Q ss_pred ----CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc-----CCCccceEEEEeCCCEEEEEe
Q psy9182 181 ----HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR-----SENSKGVYCLQYDDHKIVSGL 251 (486)
Q Consensus 181 ----~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~ 251 (486)
.++.|.+||..+.+.. ..+... ......-+++++++++|+++.
T Consensus 75 ~~g~~~~~v~v~d~~t~~~~----------------------------~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 75 TRGKRSDVVEVWDADKLTFE----------------------------KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN 126 (361)
T ss_dssp SSSCEEEEEEEEETTTCCEE----------------------------EEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred ccCCCCCEEEEEECcCCcEE----------------------------EEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence 4678999997543321 111111 112344567899999999887
Q ss_pred c--CCeEEEEECCCceeeEE-EcCCcccEEEEEec-CCEEEEEeCCCcEEEEECCC-CcEEEEe------cccCccEE-E
Q psy9182 252 R--DNTIKVWDRVSLQCIKV-LTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNT-GEMVNTL------IHHCEAVL-H 319 (486)
Q Consensus 252 ~--dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~-~~~~~~~------~~~~~~i~-~ 319 (486)
. ++.|.+||+.+++.+.. +......-..+..+ +..+++.+.||.+.+|+... ++..... .....++. .
T Consensus 127 ~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (361)
T 2oiz_A 127 ASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIA 206 (361)
T ss_dssp ESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSC
T ss_pred CCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEE
Confidence 4 57999999999998887 55322111122223 36788889999999999865 5544221 11111110 1
Q ss_pred EEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeee------------cCcccEEEEEeCCCEEEEEeC-----------C
Q psy9182 320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV------------GHRAAVNVVDFDEKYIVSASG-----------D 376 (486)
Q Consensus 320 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~l~~~~~-----------d 376 (486)
....+..++..+.++.|.++|+........ .... ........+..+++.++++.. .
T Consensus 207 ~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 207 PALDKDKAHFVSYYGNVYSADFSGDEVKVD-GPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp CEECSSEEEEEBTTSEEEEEECSSSSCEEE-EEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred ecccCCEEEEEeCCCeEEEEEecCCCceec-ccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence 112234666677889999999876542211 1110 011112355567777776643 3
Q ss_pred CcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCC--eeeEEecCcccCeEEEEe
Q psy9182 377 RTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRCIRF 445 (486)
Q Consensus 377 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~h~~~v~~~~~ 445 (486)
+.|.+||+.+++.+.++..+. ...+.+ ++++|++++. +.|.+||..++ +.+..+..+......+++
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEe
Confidence 489999999999999998777 555555 6889988886 99999999999 999998767777777777
No 158
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=9.2e-16 Score=139.34 Aligned_cols=212 Identities=9% Similarity=0.105 Sum_probs=156.7
Q ss_pred EecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC-CcEEEEeccc-CccEEEEEEcCC
Q psy9182 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT-GEMVNTLIHH-CEAVLHLRFSNG 325 (486)
Q Consensus 250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~-~~~i~~~~~~~~ 325 (486)
++.++.|++||+.+++... +..|...+.+++| +++++++++ ++.|++||+.+ ++.......+ ...+.++.|+++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 4578899999999988764 4447888999988 788888876 78999999998 8776665554 366788889865
Q ss_pred --eEEEEe--CCCcEEEE--ECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCCCcEEEEECCC-ceEEEEEcC
Q psy9182 326 --MMVTCS--KDRSIAVW--DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGDRTIKVWNTSS-CEFVRTLNG 395 (486)
Q Consensus 326 --~l~~~~--~dg~i~i~--d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d~~i~iwd~~~-~~~~~~~~~ 395 (486)
.+++++ .++...+| ++.++.. ..+..+ ..+..+.| ++++++ +++.++.+++|+++. ......+..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTP----RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCC----EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCce----EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc
Confidence 777777 33445555 4444432 222222 23666677 788776 777889999998532 233456677
Q ss_pred CcccEEEEEeC--CCEEEEEe-CCCcEEEEECC-CCeeeEEecCcccCeEEEEe--cCCEEEEEeCC-----------Cc
Q psy9182 396 HKRGIACLQYR--DRLVVSGS-SDNTIRLWDIE-CGACLRVLEGHEELVRCIRF--DAKRIVSGAYD-----------GK 458 (486)
Q Consensus 396 ~~~~v~~~~~~--~~~l~~~~-~dg~v~iwd~~-~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d-----------g~ 458 (486)
+...+.++.|+ +++|+.++ .++.+++|++. .+..+..+..|...+.+++| ++++|++++.+ +.
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 77888888884 77777666 58999999986 56677788888888999999 88898888876 56
Q ss_pred EEEEeCCCCC
Q psy9182 459 IKVWNLVAAL 468 (486)
Q Consensus 459 v~iwdl~~~~ 468 (486)
|.+||+.++.
T Consensus 251 l~~~d~~~~~ 260 (297)
T 2ojh_A 251 VQLMDMDGGN 260 (297)
T ss_dssp EEEEETTSCS
T ss_pred EEEEecCCCC
Confidence 9999998754
No 159
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.72 E-value=1.1e-14 Score=137.37 Aligned_cols=296 Identities=10% Similarity=0.047 Sum_probs=200.4
Q ss_pred CcceEEEeecCceeeecccccccceeeecCcc---------cce-eEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---------RGI-ACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT 184 (486)
Q Consensus 115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~---------~~V-~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~ 184 (486)
++..|+.++.++.|..+|..+|+.+....... ..+ ..... ++..++.++.++.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~v~~~~g~ 114 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-----------------SGGHVYIGSEKAQ 114 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-----------------ETTEEEEEETTSE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-----------------eCCEEEEEcCCCE
Confidence 56688888889999999999999887765422 111 11222 2334555666777
Q ss_pred ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc
Q psy9182 185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL 264 (486)
Q Consensus 185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~ 264 (486)
|..+|..+++......... ...... ...+..+++++.++.|..+|..++
T Consensus 115 l~a~d~~tG~~~W~~~~~~---------------------------~~~~~p----~~~~~~v~v~~~~g~l~~~d~~tG 163 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTKVAG---------------------------EALSRP----VVSDGLVLIHTSNGQLQALNEADG 163 (376)
T ss_dssp EEEEETTTCCEEEEEECSS---------------------------CCCSCC----EEETTEEEEECTTSEEEEEETTTC
T ss_pred EEEEECCCCCEEEEEeCCC---------------------------ceEcCC----EEECCEEEEEcCCCeEEEEECCCC
Confidence 7777765544322111000 000011 123567888899999999999999
Q ss_pred eeeEEEcCCcccE-----EEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCc-----------cEEEEEEcCCeEE
Q psy9182 265 QCIKVLTGHTGSV-----LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE-----------AVLHLRFSNGMMV 328 (486)
Q Consensus 265 ~~~~~~~~~~~~v-----~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-----------~i~~~~~~~~~l~ 328 (486)
+.+.......... ......+..+++++.+|.+..+|..+++.+........ ........++.++
T Consensus 164 ~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~ 243 (376)
T 3q7m_A 164 AVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVF 243 (376)
T ss_dssp CEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEE
T ss_pred cEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEE
Confidence 9888776432211 12223466788888899999999999998877653211 0012223467889
Q ss_pred EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcC-CcccEEEEEeCC
Q psy9182 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQYRD 407 (486)
Q Consensus 329 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~ 407 (486)
+++.++.+..+|..+++...... ......+..++..++.++.++.|..+|..+++.+..... ...........+
T Consensus 244 ~~~~~g~l~~~d~~tG~~~w~~~-----~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~ 318 (376)
T 3q7m_A 244 ALAYNGNLTALDLRSGQIMWKRE-----LGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYN 318 (376)
T ss_dssp EECTTSCEEEEETTTCCEEEEEC-----CCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEET
T ss_pred EEecCcEEEEEECCCCcEEeecc-----CCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEEC
Confidence 99999999999999887543211 122445556788888899999999999999998877762 222333344457
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE-EEEecCCEEEEEeCCCcEEEEe
Q psy9182 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWN 463 (486)
Q Consensus 408 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~l~s~~~dg~v~iwd 463 (486)
..|+.++.+|.|.++|.++|+.+.........+. .....+..|+.++.+|.|..|+
T Consensus 319 ~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 319 GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 8899999999999999999999888776444333 2334677889999999999987
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=5.9e-15 Score=152.00 Aligned_cols=315 Identities=12% Similarity=0.049 Sum_probs=194.0
Q ss_pred cccccccCCccCcceEEEeecCceeeecccccccceeeecCccccee-----EEEeecceeEecCCCCceeccCcceeec
Q psy9182 104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-----CLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~-----~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
.....++.++|||++++++ ||.|++||+.+++....+.+|..... .++|+ +|+++|+.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S---------------pdg~~l~~ 78 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSIS---------------PDGQFILL 78 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEEC---------------TTSSEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEEC---------------CCCCEEEE
Confidence 3446678999999999986 89999999999998888888864432 24555 57777777
Q ss_pred CCCC---------CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEE
Q psy9182 179 SSHD---------DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS 249 (486)
Q Consensus 179 ~s~d---------g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 249 (486)
++.+ +.+.+||+.++....... ........+++|||+.||.
T Consensus 79 ~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~------------------------------~~~~~~~~~~SPdG~~la~ 128 (740)
T 4a5s_A 79 EYNYVKQWRHSYTASYDIYDLNKRQLITEER------------------------------IPNNTQWVTWSPVGHKLAY 128 (740)
T ss_dssp EEEEEECSSSCEEEEEEEEETTTTEECCSSC------------------------------CCTTEEEEEECSSTTCEEE
T ss_pred EECCeeeEEEccceEEEEEECCCCcEEEccc------------------------------CCCcceeeEECCCCCEEEE
Confidence 7765 455699987755432211 0122345678999999988
Q ss_pred EecCCeEEEEECCCceeeEEE-cCCcccE-----------------EEEEe--cCCEEEEEeCCC---------------
Q psy9182 250 GLRDNTIKVWDRVSLQCIKVL-TGHTGSV-----------------LCLQY--DERVIISGSSDS--------------- 294 (486)
Q Consensus 250 ~~~dg~i~i~d~~~~~~~~~~-~~~~~~v-----------------~~~~~--~~~~l~~~~~dg--------------- 294 (486)
+ .++.|++||..+++..+.. .++...+ .++.| ||+.|+.++.|.
T Consensus 129 ~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~ 207 (740)
T 4a5s_A 129 V-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES 207 (740)
T ss_dssp E-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT
T ss_pred E-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC
Confidence 8 5789999999887755422 2332222 12444 899888875321
Q ss_pred ---------------------cEEEEECCC---Cc--EEEEec------ccCccEEEEEEcCC--eEEEEeC----CCcE
Q psy9182 295 ---------------------TVRVWDVNT---GE--MVNTLI------HHCEAVLHLRFSNG--MMVTCSK----DRSI 336 (486)
Q Consensus 295 ---------------------~i~vwd~~~---~~--~~~~~~------~~~~~i~~~~~~~~--~l~~~~~----dg~i 336 (486)
.|++||+.+ ++ ....+. .+...+..++|+++ .++.... +..|
T Consensus 208 ~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i 287 (740)
T 4a5s_A 208 LQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVM 287 (740)
T ss_dssp CSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEE
T ss_pred CCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEE
Confidence 488899988 73 223333 26677889999865 3443322 2369
Q ss_pred EEEECCCCC----ceeeEEe-eecCcccEE-----EEEe--CCCEEE-EEeC-C--CcEEEEECCCceEEEEEcCCcccE
Q psy9182 337 AVWDMVSPN----EITLRRV-LVGHRAAVN-----VVDF--DEKYIV-SASG-D--RTIKVWNTSSCEFVRTLNGHKRGI 400 (486)
Q Consensus 337 ~i~d~~~~~----~~~~~~~-~~~~~~~v~-----~~~~--~~~~l~-~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~v 400 (486)
.+||+.+++ ....... ...+...+. ...| ||+.++ ..+. + ..|++||..+++.. .+......+
T Consensus 288 ~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v 366 (740)
T 4a5s_A 288 DICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEV 366 (740)
T ss_dssp EEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCE
T ss_pred EEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEE
Confidence 999998876 1111111 123433332 3344 888776 5553 3 35888998876654 444334444
Q ss_pred EE-EEeCCCEEEEEeCC-----C--cEEEEECCCCeeeEEecC----cccCeEEEEe--cCCEEEEEeCC---CcEEEEe
Q psy9182 401 AC-LQYRDRLVVSGSSD-----N--TIRLWDIECGACLRVLEG----HEELVRCIRF--DAKRIVSGAYD---GKIKVWN 463 (486)
Q Consensus 401 ~~-~~~~~~~l~~~~~d-----g--~v~iwd~~~~~~~~~~~~----h~~~v~~~~~--~~~~l~s~~~d---g~v~iwd 463 (486)
.. +.++++.|+..+.. + .|+..++..+.....+.. .......+.| ++++++..... ..+.+++
T Consensus 367 ~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~ 446 (740)
T 4a5s_A 367 IGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHS 446 (740)
T ss_dssp EEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEE
T ss_pred EEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEE
Confidence 44 34677665554433 3 455555554433324432 2356778888 77776654433 3577777
Q ss_pred CCCC
Q psy9182 464 LVAA 467 (486)
Q Consensus 464 l~~~ 467 (486)
...+
T Consensus 447 ~~~~ 450 (740)
T 4a5s_A 447 SVND 450 (740)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7644
No 161
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.70 E-value=1.1e-14 Score=134.93 Aligned_cols=222 Identities=9% Similarity=0.055 Sum_probs=156.4
Q ss_pred eCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC-CCcEEEEECCCCcE-EEEecccCcc
Q psy9182 242 YDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS-DSTVRVWDVNTGEM-VNTLIHHCEA 316 (486)
Q Consensus 242 ~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~~~~-~~~~~~~~~~ 316 (486)
.+++ .+++...++.|.+||..+++....+..+...+ ++++ +++++++++. ++.|.+||+.+++. ...+..+..+
T Consensus 7 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (331)
T 3u4y_A 7 TTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS 85 (331)
T ss_dssp CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC
T ss_pred CCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC
Confidence 3444 46777889999999999999988887666666 7777 7776666655 88999999999987 6666666665
Q ss_pred EEEEEEcCC--eEEEEeCCC---cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCCCc-EEEEECCCc
Q psy9182 317 VLHLRFSNG--MMVTCSKDR---SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGDRT-IKVWNTSSC 387 (486)
Q Consensus 317 i~~~~~~~~--~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d~~-i~iwd~~~~ 387 (486)
..+++++++ .++++..++ .|.+||+.+++.... ... ......+.+ ++++++ +...++. |.+|++...
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~---~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST---IPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE---EEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE---EEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 555888765 666544443 899999988765432 222 334466666 776554 4456688 999998764
Q ss_pred eEEE----EEcCCcccEEEEEe--CCCEEEE-EeCCCcEEEEECCCCee---eEEecCcccCeEEEEe--cCCEEEEEe-
Q psy9182 388 EFVR----TLNGHKRGIACLQY--RDRLVVS-GSSDNTIRLWDIECGAC---LRVLEGHEELVRCIRF--DAKRIVSGA- 454 (486)
Q Consensus 388 ~~~~----~~~~~~~~v~~~~~--~~~~l~~-~~~dg~v~iwd~~~~~~---~~~~~~h~~~v~~~~~--~~~~l~s~~- 454 (486)
..+. ...........+.+ +++++++ +..++.|.+||+.+++. +..+..+ ..+..++| ||++|+.++
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc
Confidence 3321 11133345666776 4775554 45689999999999888 7777644 56678888 888776655
Q ss_pred CCCcEEEEeCCCCCC
Q psy9182 455 YDGKIKVWNLVAALD 469 (486)
Q Consensus 455 ~dg~v~iwdl~~~~~ 469 (486)
.++.|.+||+.++..
T Consensus 241 ~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 241 STVDVFNFNQLSGTL 255 (331)
T ss_dssp SEEEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCce
Confidence 578899999987543
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=9.9e-15 Score=138.39 Aligned_cols=221 Identities=14% Similarity=0.084 Sum_probs=134.8
Q ss_pred EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEE----ecCCEEEEE----------------------eCC
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ----YDERVIISG----------------------SSD 293 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~----------------------~~d 293 (486)
++|+++.|+.++.++.|++||+.+++....+..+...+.... .++..++.. ..+
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC 167 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence 345666666666666777777777666555554444332222 255555532 244
Q ss_pred CcEEEEECCCCcEEEEecccCccEEEEEEcC-C--eEEEEeCC------CcEEEEECCCCCceeeEEeeecCc--ccEEE
Q psy9182 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-G--MMVTCSKD------RSIAVWDMVSPNEITLRRVLVGHR--AAVNV 362 (486)
Q Consensus 294 g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-~--~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~--~~v~~ 362 (486)
+.|.+||+.+++... +..+...+..+.|+| + .++....+ ..|.++|...++... +..+. ..+..
T Consensus 168 ~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~----l~~~~~~~~~~~ 242 (388)
T 3pe7_A 168 CRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK----VKTHAEGESCTH 242 (388)
T ss_dssp EEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE----SCCCCTTEEEEE
T ss_pred ceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE----eeeCCCCccccc
Confidence 679999999887544 444566788999988 5 56555543 378888877654322 22222 34555
Q ss_pred EEe--CCCEEEEEeC-CC----cEEEEECCCceE--EEEEcCCcc-----cEEEEEeCCCEEEEE---------eCCCcE
Q psy9182 363 VDF--DEKYIVSASG-DR----TIKVWNTSSCEF--VRTLNGHKR-----GIACLQYRDRLVVSG---------SSDNTI 419 (486)
Q Consensus 363 ~~~--~~~~l~~~~~-d~----~i~iwd~~~~~~--~~~~~~~~~-----~v~~~~~~~~~l~~~---------~~dg~v 419 (486)
..| ||+.|+..+. ++ .|++||+.+++. +..+.++.. .-..++.+|+.|+.. ..+..|
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 666 7886655432 22 399999998874 333333111 011466677766643 456789
Q ss_pred EEEECCCCeeeEEecCccc-----------CeEEEEe--cCCEEEEEe-CCCcEEEEeCCC
Q psy9182 420 RLWDIECGACLRVLEGHEE-----------LVRCIRF--DAKRIVSGA-YDGKIKVWNLVA 466 (486)
Q Consensus 420 ~iwd~~~~~~~~~~~~h~~-----------~v~~~~~--~~~~l~s~~-~dg~v~iwdl~~ 466 (486)
++||+.+++. ..+..|.. .+.+++| ||++|+.++ .+|...+|.++.
T Consensus 323 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 323 YVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 9999998775 44544544 4677788 888877655 577777776653
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.68 E-value=3.1e-15 Score=149.93 Aligned_cols=224 Identities=16% Similarity=0.085 Sum_probs=158.6
Q ss_pred ccceEEEEeCCCEEEEEec-CCeEEEEECCCceeeEEEcCCcccEEEEEecC-CEEEEEeC---CCcEEEEECCC---Cc
Q psy9182 234 SKGVYCLQYDDHKIVSGLR-DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE-RVIISGSS---DSTVRVWDVNT---GE 305 (486)
Q Consensus 234 ~~~v~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~---dg~i~vwd~~~---~~ 305 (486)
....+++++||+.|+.++. ||++.||++.+++..+....+...+.++.|.+ +.+++++. +....+|.+.. +.
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCc
Confidence 3455678899999998887 99999999877765544433336788888833 56666654 45455654432 33
Q ss_pred EEEEecc-cCccEEEEEEcCC-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC----CcE
Q psy9182 306 MVNTLIH-HCEAVLHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD----RTI 379 (486)
Q Consensus 306 ~~~~~~~-~~~~i~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----~~i 379 (486)
.. .+.. ....+.+++++++ .+++...++.+.+||+.+++..... ..+ ..-..+++||+++++++.+ +.|
T Consensus 103 ~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~---~~~-~~~~~~spDG~~la~~~~~~~~~~~i 177 (582)
T 3o4h_A 103 EQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA---RLP-GFGFVSDIRGDLIAGLGFFGGGRVSL 177 (582)
T ss_dssp CE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE---EES-SCEEEEEEETTEEEEEEEEETTEEEE
T ss_pred cc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee---cCC-CceEEECCCCCEEEEEEEcCCCCeEE
Confidence 22 3322 2233445555554 4555556666779999887543222 222 2333455599999988776 789
Q ss_pred EEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCC--cEEEEECCCCeeeEEecCcccCeEEEE--------e--
Q psy9182 380 KVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN--TIRLWDIECGACLRVLEGHEELVRCIR--------F-- 445 (486)
Q Consensus 380 ~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~h~~~v~~~~--------~-- 445 (486)
++||+.+++.. .+..|...+..+.| +|+.|+++..++ .|++||+.+++.. .+.+|...+..++ |
T Consensus 178 ~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 178 FTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp EEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred EEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcC
Confidence 99999988754 67778888888877 589999888888 8999999998887 7778877666666 7
Q ss_pred cCCEEEEEeCCCcEEEEeC
Q psy9182 446 DAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 446 ~~~~l~s~~~dg~v~iwdl 464 (486)
||..+++++.||.+++|++
T Consensus 256 dg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 256 DGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TSCEEEEEEETTEEEEEET
T ss_pred CCcEEEEEEcCCcEEEEEE
Confidence 8888999999999999999
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=2e-13 Score=139.00 Aligned_cols=318 Identities=11% Similarity=0.003 Sum_probs=189.1
Q ss_pred cccccccCCccCcceEEEe--ecCceeeecccccccceeeecCccccee---------EEEeecceeEecCCCCceeccC
Q psy9182 104 QRDFISLLPNFDEKYIVSA--SGDRTIKVWNTSSCEFVRTLNGHKRGIA---------CLQYRDRLVVSGSSDNTIRYRD 172 (486)
Q Consensus 104 ~~~~~~~~~s~~~~~l~tg--~~dg~v~iWd~~~~~~~~~l~~h~~~V~---------~~~~~~~~~~~~~~d~~i~~~~ 172 (486)
...+....+++++.++++. +.++...||....+.....+..|...+. ...|.. + +|
T Consensus 23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------S-------PD 89 (662)
T 3azo_A 23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVP------R-------PA 89 (662)
T ss_dssp CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEEC------C-------SS
T ss_pred CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeee------e-------cC
Confidence 3455666777777777777 6688999999765666677777765554 333320 0 45
Q ss_pred cce-eecCC-CCCcceeeecc--c-ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE
Q psy9182 173 EFQ-IVSSS-HDDTILIWDFL--N-YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI 247 (486)
Q Consensus 173 ~~~-l~s~s-~dg~i~vWd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 247 (486)
++. |+.++ .+..|.+|++. . ........... ..........+++|||+.|
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~-------------------------~~~~~~~~~~~~spDg~~l 144 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSA-------------------------VGGGLRWADPVLLPERGEV 144 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCC-------------------------STTCEEEEEEEEETTTTEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCcc-------------------------CCCCccccCcEECCCCCEE
Confidence 555 44333 24445555543 1 11110000000 0001123346788999999
Q ss_pred EEEecC----------CeEEEEECCC------ceeeEEEc-CCcccEEEEEe--cCCEEEEEeCC--------CcEEEEE
Q psy9182 248 VSGLRD----------NTIKVWDRVS------LQCIKVLT-GHTGSVLCLQY--DERVIISGSSD--------STVRVWD 300 (486)
Q Consensus 248 ~~~~~d----------g~i~i~d~~~------~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~d--------g~i~vwd 300 (486)
++++.+ ..|++||+.+ ++. ..+. .+...+..++| ||+.|+.++.+ ..|++||
T Consensus 145 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d 223 (662)
T 3azo_A 145 WCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTAR 223 (662)
T ss_dssp EEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEE
T ss_pred EEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEE
Confidence 988877 5899999988 554 3444 45555655555 89999887755 3799999
Q ss_pred CC-CC---cEEEEecccCccEEEEEEcCC--eEEEEeCCC--cEEEEECCCCCceeeEEeeecCccc--------EEEEE
Q psy9182 301 VN-TG---EMVNTLIHHCEAVLHLRFSNG--MMVTCSKDR--SIAVWDMVSPNEITLRRVLVGHRAA--------VNVVD 364 (486)
Q Consensus 301 ~~-~~---~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~--------v~~~~ 364 (486)
+. ++ +.......+...+..+.|+++ +++++..++ .|.+||+.+++... ....+... +..+.
T Consensus 224 ~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~---l~~~~~~~~~p~w~~~~~~~~ 300 (662)
T 3azo_A 224 VTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ---LCRREEEFAGPLWTPGMRWFA 300 (662)
T ss_dssp ECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE---SSCCSSBSSCCCCSTTCCSEE
T ss_pred ECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceee---cccccccccCccccccCceEe
Confidence 98 56 444334445678899999854 666777777 66677765554322 11122111 33455
Q ss_pred e--CCCEEEEEeCCCcEEEE--ECCCceEEEEEcCCcccEEEE-EeCCCEEE--EEeCCC--cEEEEECCCCeeeEEecC
Q psy9182 365 F--DEKYIVSASGDRTIKVW--NTSSCEFVRTLNGHKRGIACL-QYRDRLVV--SGSSDN--TIRLWDIECGACLRVLEG 435 (486)
Q Consensus 365 ~--~~~~l~~~~~d~~i~iw--d~~~~~~~~~~~~~~~~v~~~-~~~~~~l~--~~~~dg--~v~iwd~~~~~~~~~~~~ 435 (486)
+ +++++++++. +.+++| |+.+++ +..+..+...+..+ +++++.++ +++.+. .|.++|+.+++.......
T Consensus 301 ~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 301 PLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGAR 378 (662)
T ss_dssp ECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESC
T ss_pred EeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecC
Confidence 5 6788888888 999999 666665 67788887778887 77765433 334443 466667777776554455
Q ss_pred cccCeEEEEe-cCCEEEEEeCCC-cEEEEeCC
Q psy9182 436 HEELVRCIRF-DAKRIVSGAYDG-KIKVWNLV 465 (486)
Q Consensus 436 h~~~v~~~~~-~~~~l~s~~~dg-~v~iwdl~ 465 (486)
+...+....+ ....+...+.|| .|..|-+.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~ 410 (662)
T 3azo_A 379 HTDPVDPAYYPEPQIRTFTAPDGREIHAHIYP 410 (662)
T ss_dssp CCCSSCGGGSCCCEEEEEECTTSCEEEEEEEC
T ss_pred CcccCCccccCcceEEEEEcCCCCEEEEEEEC
Confidence 5433333333 222233333344 56666543
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.61 E-value=1.5e-14 Score=148.78 Aligned_cols=295 Identities=13% Similarity=0.064 Sum_probs=179.7
Q ss_pred cccccCCccCcceEEEeec---------Cceeeecccccccce--eeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182 106 DFISLLPNFDEKYIVSASG---------DRTIKVWNTSSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~---------dg~v~iWd~~~~~~~--~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~ 174 (486)
.+.++.+||||++|++++. ++.|++||+.+++.+ ..+. ..+..++|+ +|++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~S---------------PDG~ 122 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWS---------------PVGS 122 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEEC---------------SSTT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceEC---------------CCCC
Confidence 3678899999999999876 799999999998763 2232 467888887 6888
Q ss_pred eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254 (486)
Q Consensus 175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 254 (486)
.|+.+. ++.|++|++.++............. .......|-... .........+++|||+.|++++.|.
T Consensus 123 ~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~---v~~g~~~~v~~e--------e~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 123 KLAYVY-QNNIYLKQRPGDPPFQITFNGRENK---IFNGIPDWVYEE--------EMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp CEEEEE-TTEEEEESSTTSCCEECCCCCBTTT---EEESSCCHHHHH--------HTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCC---eEcccccceeee--------ecccCcccEEECCCCCEEEEEEECC
Confidence 888774 7899999987654432211110000 000000000000 0001123578899999999987652
Q ss_pred ----------------------------------eEEEEECCCceee---E-----EEcCCcccEEEEEe--cCCEEEEE
Q psy9182 255 ----------------------------------TIKVWDRVSLQCI---K-----VLTGHTGSVLCLQY--DERVIISG 290 (486)
Q Consensus 255 ----------------------------------~i~i~d~~~~~~~---~-----~~~~~~~~v~~~~~--~~~~l~~~ 290 (486)
.|++||+.+++.. . .+.+|...+.+++| |++++++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~ 270 (719)
T 1z68_A 191 TDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQW 270 (719)
T ss_dssp TTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEE
T ss_pred CCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEE
Confidence 7889999988753 1 13357778888888 76666664
Q ss_pred eCC----CcEEEEE----CCCCcEEEEe----cccCccEE-----EEEEcCC--eEE--EEeCCC--cEEEEECCCCCce
Q psy9182 291 SSD----STVRVWD----VNTGEMVNTL----IHHCEAVL-----HLRFSNG--MMV--TCSKDR--SIAVWDMVSPNEI 347 (486)
Q Consensus 291 ~~d----g~i~vwd----~~~~~~~~~~----~~~~~~i~-----~~~~~~~--~l~--~~~~dg--~i~i~d~~~~~~~ 347 (486)
... ..|.+|| +.+++....+ ..+...+. .+.|+++ .++ +...+| .|.+||+.+++.
T Consensus 271 ~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~- 349 (719)
T 1z68_A 271 LKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA- 349 (719)
T ss_dssp EESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-
T ss_pred eccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-
Confidence 332 2488999 8777654433 24455554 6778764 333 344555 566777766552
Q ss_pred eeEEeeecCcccEEEEEe-CCCEEEEEeCC-----CcEEEEECCC--ce-EEEEEcC----CcccEEEEEe--CCCEEE-
Q psy9182 348 TLRRVLVGHRAAVNVVDF-DEKYIVSASGD-----RTIKVWNTSS--CE-FVRTLNG----HKRGIACLQY--RDRLVV- 411 (486)
Q Consensus 348 ~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d-----~~i~iwd~~~--~~-~~~~~~~----~~~~v~~~~~--~~~~l~- 411 (486)
..+..+...+..+.+ +++.++..+.+ +..++|.+.. +. ....+.. |...+..+.+ ++++++
T Consensus 350 ---~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~ 426 (719)
T 1z68_A 350 ---IQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYAL 426 (719)
T ss_dssp ---EECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEE
T ss_pred ---EecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEE
Confidence 223333444443322 77777766654 7788887653 32 1233332 5555666666 455555
Q ss_pred EEeCC--CcEEEEECCCCeeeEEec
Q psy9182 412 SGSSD--NTIRLWDIECGACLRVLE 434 (486)
Q Consensus 412 ~~~~d--g~v~iwd~~~~~~~~~~~ 434 (486)
+++.+ ..+.+||+.+++.+..+.
T Consensus 427 ~~s~~~~p~~~l~d~~~g~~~~~~~ 451 (719)
T 1z68_A 427 VCYGPGIPISTLHDGRTDQEIKILE 451 (719)
T ss_dssp EECCBSSCEEEEECSSSCCEEEEEE
T ss_pred EcCCCCCCeEEEEECCCCCEEEEee
Confidence 44433 568999998888766554
No 166
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.60 E-value=1e-12 Score=123.96 Aligned_cols=227 Identities=8% Similarity=0.041 Sum_probs=163.0
Q ss_pred EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE--
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV-- 317 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i-- 317 (486)
...++..+++++.++.|..+|..+++.+................+..+++++.++.|..+|.++|+.+..........
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL 178 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee
Confidence 344677888999999999999999998877765433222223356788889999999999999999888775532221
Q ss_pred ---EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcc----c---E-EEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182 318 ---LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA----A---V-NVVDFDEKYIVSASGDRTIKVWNTSS 386 (486)
Q Consensus 318 ---~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----~---v-~~~~~~~~~l~~~~~d~~i~iwd~~~ 386 (486)
......++.+++++.++.+..+|..+++..-.......... . + ......+..++.++.++.+..+|.++
T Consensus 179 ~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t 258 (376)
T 3q7m_A 179 RGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS 258 (376)
T ss_dssp CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT
T ss_pred cCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC
Confidence 22334467889999999999999998876532221110000 0 0 11122567788888899999999999
Q ss_pred ceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182 387 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 387 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~ 465 (486)
++.+..... .....+..++..++.++.++.|..+|..+|+.+..... ....+......+..|+.++.+|.|.++|..
T Consensus 259 G~~~w~~~~--~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~ 336 (376)
T 3q7m_A 259 GQIMWKREL--GSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVE 336 (376)
T ss_dssp CCEEEEECC--CCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETT
T ss_pred CcEEeeccC--CCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECC
Confidence 998876653 33455666788899999999999999999998887762 223344445567889999999999999988
Q ss_pred CCC
Q psy9182 466 AAL 468 (486)
Q Consensus 466 ~~~ 468 (486)
++.
T Consensus 337 tG~ 339 (376)
T 3q7m_A 337 DGR 339 (376)
T ss_dssp TCC
T ss_pred CCc
Confidence 765
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.59 E-value=1e-12 Score=123.37 Aligned_cols=232 Identities=8% Similarity=0.074 Sum_probs=150.5
Q ss_pred ccceEEEEeCCCEEEEEecCCeEEEEECC-CceeeEEEcCC-cccEEEEEe--cCCE--EEEEe-------------CCC
Q psy9182 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRV-SLQCIKVLTGH-TGSVLCLQY--DERV--IISGS-------------SDS 294 (486)
Q Consensus 234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~-~~~v~~~~~--~~~~--l~~~~-------------~dg 294 (486)
...-+++++++++|++++.+ .|.+|++. +++........ .+...++++ ++++ ++++. .+|
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 34457788999999998888 99999987 77765433210 122333444 6774 44553 689
Q ss_pred cEEEEECC-CCcEEEEec----ccCccEEEEEEcCC--eEEEEe-CCCcEEEEECC-CCCceeeEEeee--cCcccEEEE
Q psy9182 295 TVRVWDVN-TGEMVNTLI----HHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMV-SPNEITLRRVLV--GHRAAVNVV 363 (486)
Q Consensus 295 ~i~vwd~~-~~~~~~~~~----~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~--~~~~~v~~~ 363 (486)
.+.+|++. +++....+. .+...+.+++|+++ .++++. .++.|++||+. +++... ..... .+...+..+
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VGSVDAPDPGDHPRWV 198 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EEEEECSSTTCCEEEE
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-eeeEecCCCCCCCCEe
Confidence 99999997 466554443 24567889999875 566655 46899999998 555322 12222 234556677
Q ss_pred Ee--CCCEEEEEeC-CCcEEEEECC--CceEE---EEEc---C----Ccc------cEEEEE-e--CCCEEEEEeCC-C-
Q psy9182 364 DF--DEKYIVSASG-DRTIKVWNTS--SCEFV---RTLN---G----HKR------GIACLQ-Y--RDRLVVSGSSD-N- 417 (486)
Q Consensus 364 ~~--~~~~l~~~~~-d~~i~iwd~~--~~~~~---~~~~---~----~~~------~v~~~~-~--~~~~l~~~~~d-g- 417 (486)
.| +|+++++++. ++.|.+|++. +++.. ..+. . |.. .+..+. + +|++|+++..+ +
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~ 278 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence 77 7888888775 6899999765 56542 2222 1 121 366666 5 58888776543 2
Q ss_pred ----cEEEEECC-CCeeeE---EecCcccCeEEEEe-----cCCEEEEEeCC-CcEEEEeCCCC
Q psy9182 418 ----TIRLWDIE-CGACLR---VLEGHEELVRCIRF-----DAKRIVSGAYD-GKIKVWNLVAA 467 (486)
Q Consensus 418 ----~v~iwd~~-~~~~~~---~~~~h~~~v~~~~~-----~~~~l~s~~~d-g~v~iwdl~~~ 467 (486)
.|.+|++. +++... ....+...+..++| ||++|++++.+ +.|.+|+++..
T Consensus 279 ~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 279 ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999996 566543 23334333444444 58999998875 89999998754
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.58 E-value=2.5e-13 Score=128.98 Aligned_cols=286 Identities=9% Similarity=0.002 Sum_probs=172.6
Q ss_pred ecccccccceeeecCcccc-----eeEEEeecceeEecCCCCceeccCcceeecCCC---CCcceeeecccccccccCCC
Q psy9182 130 VWNTSSCEFVRTLNGHKRG-----IACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH---DDTILIWDFLNYSETPIQGG 201 (486)
Q Consensus 130 iWd~~~~~~~~~l~~h~~~-----V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~---dg~i~vWd~~~~~~~~~~~~ 201 (486)
..|..+++.+..+..+... +..++|+ +|+++|+.... +..|.+||+.++.......
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~S---------------pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~- 77 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFT---------------QDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE- 77 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBC---------------TTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCC---------------CCCCEEEEEEecCCCceEEEEECCCCcEEEeec-
Confidence 4477788777777655433 5556665 56666554432 2356777765433221110
Q ss_pred CCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEE--
Q psy9182 202 GGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC-- 279 (486)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~-- 279 (486)
..........++++++.|+.++.++.|++||+.+++.......+......
T Consensus 78 ----------------------------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~ 129 (396)
T 3c5m_A 78 ----------------------------GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGT 129 (396)
T ss_dssp ----------------------------SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEE
T ss_pred ----------------------------CCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCC
Confidence 00111122567899999999999999999999988876666544432211
Q ss_pred -EE------------------ecCCEEEEE-----eCCCcEEEEECCCCcEEEEecccCccEEEEEEcC-C--eEEEEeC
Q psy9182 280 -LQ------------------YDERVIISG-----SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-G--MMVTCSK 332 (486)
Q Consensus 280 -~~------------------~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-~--~l~~~~~ 332 (486)
+. .+++.++.+ ..+..|.+||+.+++..... .+...+..+.|++ + .++..+.
T Consensus 130 ~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~ 208 (396)
T 3c5m_A 130 WVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHE 208 (396)
T ss_dssp EEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEEC
T ss_pred EEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEec
Confidence 11 133333322 34568999999988765444 4566788899987 3 4555544
Q ss_pred C------CcEEEEECCCCCceeeEEeeecC-cccEEEEEe--CCCEEEEEeCC-----CcEEEEECCCceEEEEEcCCcc
Q psy9182 333 D------RSIAVWDMVSPNEITLRRVLVGH-RAAVNVVDF--DEKYIVSASGD-----RTIKVWNTSSCEFVRTLNGHKR 398 (486)
Q Consensus 333 d------g~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~ 398 (486)
+ ..|.+||+..++... ..... ...+..+.| +|++|+.++.+ +.|++||+.+++..........
T Consensus 209 ~~~~~~~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 285 (396)
T 3c5m_A 209 GPHDLVDARMWLVNEDGSNVRK---IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC 285 (396)
T ss_dssp SCSSSCSCCCEEEETTSCCCEE---SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE
T ss_pred CCCCCCCceEEEEECCCCceeE---eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC
Confidence 3 368889987654321 11111 234666666 78877666543 4499999988865443222111
Q ss_pred cEEEEEe-CCCEEEEEe----------------CCCcEEEEECCCCeeeEEecCccc-----------CeEEEEe--cCC
Q psy9182 399 GIACLQY-RDRLVVSGS----------------SDNTIRLWDIECGACLRVLEGHEE-----------LVRCIRF--DAK 448 (486)
Q Consensus 399 ~v~~~~~-~~~~l~~~~----------------~dg~v~iwd~~~~~~~~~~~~h~~-----------~v~~~~~--~~~ 448 (486)
. ..++. ++++++.++ .++.|++||+.+++.. .+..+.. .+..+.| ||+
T Consensus 286 ~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 286 S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCC
Confidence 1 44555 788888765 3478999999887754 3444433 2455667 888
Q ss_pred EEEEEeC-CCcEEEEeCC
Q psy9182 449 RIVSGAY-DGKIKVWNLV 465 (486)
Q Consensus 449 ~l~s~~~-dg~v~iwdl~ 465 (486)
+|+.++. ++...+|.++
T Consensus 364 ~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 364 GVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEEEEECTTSSCEEEEEE
T ss_pred eEEEEecCCCCceEEEEE
Confidence 8877664 5665565544
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.57 E-value=4.9e-12 Score=118.74 Aligned_cols=266 Identities=6% Similarity=-0.001 Sum_probs=162.5
Q ss_pred eEEEeecC--ceeeeccc--cccccee--eec-CcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeec
Q psy9182 118 YIVSASGD--RTIKVWNT--SSCEFVR--TLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF 190 (486)
Q Consensus 118 ~l~tg~~d--g~v~iWd~--~~~~~~~--~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~ 190 (486)
+++.|+.. +.|.+|++ .+|++.. ... ++...+..++|+ +++++|++++.+ .|.+|++
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~s---------------pdg~~l~~~~~~-~v~~~~~ 67 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFD---------------HERKNIYGAAMK-KWSSFAV 67 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEEC---------------TTSSEEEEEEBT-EEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEEC---------------CCCCEEEEEccc-eEEEEEE
Confidence 45555543 56888765 4555322 221 233456778886 577777777777 8999998
Q ss_pred c-cccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE--EEEEe-------------cCC
Q psy9182 191 L-NYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGL-------------RDN 254 (486)
Q Consensus 191 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~-------------~dg 254 (486)
. ++.... ..... ..+. ....++++++++ ++++. .+|
T Consensus 68 ~~~g~~~~--------------------------~~~~~-~~g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 68 KSPTEIVH--------------------------EASHP-IGGH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp EETTEEEE--------------------------EEEEE-CCSS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCCCCEEE--------------------------eeEee-cCCC-CccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 5 322110 00000 0011 122456778884 44443 689
Q ss_pred eEEEEECC-CceeeEEEc----CCcccEEEEEe--cCCEEEEEeC-CCcEEEEECC-CCcEE--EEec--ccCccEEEEE
Q psy9182 255 TIKVWDRV-SLQCIKVLT----GHTGSVLCLQY--DERVIISGSS-DSTVRVWDVN-TGEMV--NTLI--HHCEAVLHLR 321 (486)
Q Consensus 255 ~i~i~d~~-~~~~~~~~~----~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~-~~~~~--~~~~--~~~~~i~~~~ 321 (486)
.+.+|++. +++....+. .+...+.++.+ ++++++++.. ++.|++||+. +++.. ..+. .+...+..++
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 99999987 465544333 24456778877 7888887654 6799999998 77653 2333 2356688999
Q ss_pred EcCC--eEEEEeC-CCcEEEEECC--CCCcee---eEEeee----cCcc------cEEEEE-e--CCCEEEEEeCCC---
Q psy9182 322 FSNG--MMVTCSK-DRSIAVWDMV--SPNEIT---LRRVLV----GHRA------AVNVVD-F--DEKYIVSASGDR--- 377 (486)
Q Consensus 322 ~~~~--~l~~~~~-dg~i~i~d~~--~~~~~~---~~~~~~----~~~~------~v~~~~-~--~~~~l~~~~~d~--- 377 (486)
|+++ .+++++. ++.|.+|++. +++... ...... ++.. .+..+. + ||++|++++.+.
T Consensus 200 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~ 279 (365)
T 1jof_A 200 MHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFE 279 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTT
T ss_pred ECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCC
Confidence 9865 6666664 7899999875 343211 111111 1121 466677 5 888888766432
Q ss_pred ---cEEEEECC-CceEEE---EEcCCc--ccEEEEEe---CCCEEEEEeCC-CcEEEEECCCC
Q psy9182 378 ---TIKVWNTS-SCEFVR---TLNGHK--RGIACLQY---RDRLVVSGSSD-NTIRLWDIECG 427 (486)
Q Consensus 378 ---~i~iwd~~-~~~~~~---~~~~~~--~~v~~~~~---~~~~l~~~~~d-g~v~iwd~~~~ 427 (486)
.|.+|++. +++... ....+. ..-.+++. ++++|++++.+ +.|.+|++...
T Consensus 280 ~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 280 LQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999986 566543 233232 22245566 78999998864 89999998765
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=8.3e-12 Score=115.29 Aligned_cols=232 Identities=15% Similarity=0.149 Sum_probs=163.0
Q ss_pred cceEEEEeCCCEEEEEecC------------------------CeEEEEECCCceeeEEEc-CCcccEEEEEe--cCCEE
Q psy9182 235 KGVYCLQYDDHKIVSGLRD------------------------NTIKVWDRVSLQCIKVLT-GHTGSVLCLQY--DERVI 287 (486)
Q Consensus 235 ~~v~~~~~~~~~l~~~~~d------------------------g~i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l 287 (486)
...++++++|+++++...+ +.|.+||..+++.+..+. ++-.....+++ +++++
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~ 105 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYW 105 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEE
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEE
Confidence 3445677788888887777 479999999898877665 34456777777 67888
Q ss_pred EEEeCCCcEEEEECCCCc-EEEEe---------cccCccEEEEEEcC--CeEEEEe--CCCcEEEEECCCCCceeeEEee
Q psy9182 288 ISGSSDSTVRVWDVNTGE-MVNTL---------IHHCEAVLHLRFSN--GMMVTCS--KDRSIAVWDMVSPNEITLRRVL 353 (486)
Q Consensus 288 ~~~~~dg~i~vwd~~~~~-~~~~~---------~~~~~~i~~~~~~~--~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~ 353 (486)
++...++.|++||..... .+..+ ..+......+++++ +.++++. .++.|++||. .+.........
T Consensus 106 v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~ 184 (329)
T 3fvz_A 106 VTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEE 184 (329)
T ss_dssp EEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEE
T ss_pred EEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccC
Confidence 888888999999986442 44444 23344678899985 3444444 5899999994 44433222111
Q ss_pred e-------cCcccEEEEEe--C-CCEEEEEeCCCcEEEEECCCceEEEEEc--CCcccEEEEEeCCCEEEE--------E
Q psy9182 354 V-------GHRAAVNVVDF--D-EKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVS--------G 413 (486)
Q Consensus 354 ~-------~~~~~v~~~~~--~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~--------~ 413 (486)
. ++-.....+++ + +.++++...++.|++||..+++.+..+. .+...+..+.+.+.+++. .
T Consensus 185 g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~ 264 (329)
T 3fvz_A 185 SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGD 264 (329)
T ss_dssp CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTC
T ss_pred CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEecc
Confidence 0 12223566776 5 5666677788899999999899888885 344566666665433332 2
Q ss_pred eCCCcEEEEECCCCeeeEEec---CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 414 SSDNTIRLWDIECGACLRVLE---GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 414 ~~dg~v~iwd~~~~~~~~~~~---~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
..+..|++||..+++.+..+. ++...+..|++ +|..+++...++.|++|++...
T Consensus 265 ~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 265 QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 334589999999999998883 66777899999 6767888888999999998754
No 171
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=1.1e-11 Score=121.89 Aligned_cols=311 Identities=11% Similarity=0.126 Sum_probs=205.4
Q ss_pred CccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecc
Q psy9182 112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFL 191 (486)
Q Consensus 112 ~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~ 191 (486)
.++.+.++++...++.|.++|..+++.+.++.... .+..+.|+ +|++++++++.|+.|.+||+.
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~S---------------pDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLS---------------ASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEEC---------------TTSCEEEEEETTSEEEEEETT
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEEC---------------CCCCEEEEEcCCCeEEEEECC
Confidence 44566778888899999999999999998887543 45677786 678888888889999999974
Q ss_pred --cccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEE----eCCCEEEEEec-CCeEEEEECCCc
Q psy9182 192 --NYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQ----YDDHKIVSGLR-DNTIKVWDRVSL 264 (486)
Q Consensus 192 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~~~-dg~i~i~d~~~~ 264 (486)
+.. ....+.. +....-++++ |+|++++++.. ++.|.++|..+.
T Consensus 227 ~~t~~----------------------------~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 227 MKEPT----------------------------TVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp SSSCC----------------------------EEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CCCCc----------------------------EeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 221 1122221 2233456678 69998877664 589999999999
Q ss_pred eeeEEEcCCc----------c-cEEEEEe--c-CCEEEEEeCCCcEEEEECCCCcEEEEe-cccCccEEEEEEcCC--eE
Q psy9182 265 QCIKVLTGHT----------G-SVLCLQY--D-ERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFSNG--MM 327 (486)
Q Consensus 265 ~~~~~~~~~~----------~-~v~~~~~--~-~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~i~~~~~~~~--~l 327 (486)
+.++.+.... . .+..+.. + ..+++....+|.|.++|..+.+..... .........+.|+++ ++
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEE
Confidence 9988775321 2 3555554 3 345666667799999998876432221 122344567778764 55
Q ss_pred EE-EeCCCcEEEEECCCCCceeeEEe--eecCcc-cEEEEEeCCCEE-EEEe-CCCcEEEEECCC-------ceEEEEEc
Q psy9182 328 VT-CSKDRSIAVWDMVSPNEITLRRV--LVGHRA-AVNVVDFDEKYI-VSAS-GDRTIKVWNTSS-------CEFVRTLN 394 (486)
Q Consensus 328 ~~-~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~-~v~~~~~~~~~l-~~~~-~d~~i~iwd~~~-------~~~~~~~~ 394 (486)
++ ...++.|.++|+.+++....... ...|.. ...-+..++..+ +++. .++.|.++|..+ .+.++++.
T Consensus 357 ~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~ 436 (567)
T 1qks_A 357 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFP 436 (567)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEe
Confidence 54 44678999999998875543332 123432 222234454444 4443 468999999988 67888887
Q ss_pred CCcccE--EEEEeCCCEEEEEeC-------CCcEEEEECCCC-----e-eeEEec--------CcccCeEEEEe--cCCE
Q psy9182 395 GHKRGI--ACLQYRDRLVVSGSS-------DNTIRLWDIECG-----A-CLRVLE--------GHEELVRCIRF--DAKR 449 (486)
Q Consensus 395 ~~~~~v--~~~~~~~~~l~~~~~-------dg~v~iwd~~~~-----~-~~~~~~--------~h~~~v~~~~~--~~~~ 449 (486)
.....- .....+++++.+... .+.|.++|+.+. . ....+. .....+..+.| +|++
T Consensus 437 ~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 516 (567)
T 1qks_A 437 ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTE 516 (567)
T ss_dssp CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSE
T ss_pred cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCE
Confidence 654332 234456888887663 459999999876 2 113332 12346778888 8888
Q ss_pred EEEEe-----CCCcEEEEeCCCCC
Q psy9182 450 IVSGA-----YDGKIKVWNLVAAL 468 (486)
Q Consensus 450 l~s~~-----~dg~v~iwdl~~~~ 468 (486)
+..+. .++.|.|+|..+..
T Consensus 517 ~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 517 VWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp EEEEEECCTTSCCEEEEEETTTTE
T ss_pred EEEEeecCCCCCCcEEEEECCCce
Confidence 76653 37999999988754
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.56 E-value=1.1e-11 Score=112.03 Aligned_cols=222 Identities=13% Similarity=0.195 Sum_probs=152.6
Q ss_pred EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC------CcccEEEEEe--cCCEEEEEeC--CCcEEEEECCCCcEE
Q psy9182 238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG------HTGSVLCLQY--DERVIISGSS--DSTVRVWDVNTGEMV 307 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~v~~~~~--~~~~l~~~~~--dg~i~vwd~~~~~~~ 307 (486)
+++++++.++++...++.|.+||.. ++.+..+.. +...+.++++ .+..++++.. ++.|.+|| .+++.+
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~ 112 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFV 112 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEE
T ss_pred EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEE
Confidence 4556678888888889999999977 566666542 3356778887 2344444443 78999999 567777
Q ss_pred EEecc-cCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEE
Q psy9182 308 NTLIH-HCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW 382 (486)
Q Consensus 308 ~~~~~-~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iw 382 (486)
..+.. +...+..++++++ .+++...++.|.+||.. ++..... ....+...+..+.+ +++++++...++.|++|
T Consensus 113 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 190 (286)
T 1q7f_A 113 RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKF-GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVF 190 (286)
T ss_dssp EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE-ECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEE
T ss_pred EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEe-CCCCccCCcEEEEECCCCCEEEEECCCCEEEEE
Confidence 66643 3456788888753 55555668899999964 3322211 11133445777777 56666766778999999
Q ss_pred ECCCceEEEEEcCC--cccEEEEEeC--CCEEEEEeCCC-cEEEEECCCCeeeEEecCccc--CeEEEEe--cCCEEEEE
Q psy9182 383 NTSSCEFVRTLNGH--KRGIACLQYR--DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEE--LVRCIRF--DAKRIVSG 453 (486)
Q Consensus 383 d~~~~~~~~~~~~~--~~~v~~~~~~--~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~h~~--~v~~~~~--~~~~l~s~ 453 (486)
|. +++.+..+..+ ......++++ ++++++...++ .|.+||. +++.+..+..+.. .+.++++ +|+.+++
T Consensus 191 ~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs- 267 (286)
T 1q7f_A 191 NY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA- 267 (286)
T ss_dssp ET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-
T ss_pred cC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-
Confidence 97 45666666543 3567777774 77777777775 9999995 4777777765433 4678888 6665555
Q ss_pred eCCCcEEEEeCCC
Q psy9182 454 AYDGKIKVWNLVA 466 (486)
Q Consensus 454 ~~dg~v~iwdl~~ 466 (486)
+.|+.|++|++..
T Consensus 268 ~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 268 SKDYRLYIYRYVQ 280 (286)
T ss_dssp ETTTEEEEEECSC
T ss_pred CCCCeEEEEEccc
Confidence 6799999999864
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.55 E-value=5.6e-12 Score=112.91 Aligned_cols=206 Identities=9% Similarity=0.077 Sum_probs=148.1
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCCc-ccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccC-ccEE
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT-GSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC-EAVL 318 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i~ 318 (486)
.++.|++++.++.|.+||.++++.+..+..+. ..+.++.+ +|++++ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 35778999999999999999999999998765 35555555 788887 45778999999 899999887643 4566
Q ss_pred EEEEcC--CeEEEEeC-CCcEEEEECCCCCceeeEEeee---cCcccEE--EEEeCCCEEEEEeCCCcEEEEECCCceEE
Q psy9182 319 HLRFSN--GMMVTCSK-DRSIAVWDMVSPNEITLRRVLV---GHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFV 390 (486)
Q Consensus 319 ~~~~~~--~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~---~~~~~v~--~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 390 (486)
++.+.+ +.+++.+. ++.|..+|. +++.+....... .+..... ....+|+++++...++.|..||.+ |+.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 677654 36666666 777888876 455433222111 1111222 233389999999999999999988 9999
Q ss_pred EEEcCCcccEEEE-EeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc------cCeEEEEe--cCCEEEEE
Q psy9182 391 RTLNGHKRGIACL-QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE------ELVRCIRF--DAKRIVSG 453 (486)
Q Consensus 391 ~~~~~~~~~v~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~------~~v~~~~~--~~~~l~s~ 453 (486)
.++.......... ..+++++++++.++.|..+|..+|+.+..+..+. ..+..+.. +|+.+++.
T Consensus 159 w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 159 NSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 9888654332222 2358899988888899999999999999986442 12566666 77777666
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=1.7e-11 Score=113.46 Aligned_cols=210 Identities=10% Similarity=0.078 Sum_probs=135.4
Q ss_pred EeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC----CcEEEEECCCCcEEEEec--c
Q psy9182 241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD----STVRVWDVNTGEMVNTLI--H 312 (486)
Q Consensus 241 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~--~ 312 (486)
++++++++++..++.|.+||..+++.......+...+.++.+ +++++++...+ +.|.+||..++.....+. .
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 132 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS 132 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc
Confidence 446666666777788888888877765544445677888888 56766666655 689999998877654332 2
Q ss_pred cCccEEEEEEcCC-eEEEEeC-------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEE
Q psy9182 313 HCEAVLHLRFSNG-MMVTCSK-------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKV 381 (486)
Q Consensus 313 ~~~~i~~~~~~~~-~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~i 381 (486)
....+..+.++++ .+++++. .+.|..+|..+++..... .....+..+.+ +++.++.+ +.++.|.+
T Consensus 133 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~ 208 (333)
T 2dg1_A 133 TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII----QNISVANGIALSTDEKVLWVTETTANRLHR 208 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE----EEESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee----cCCCcccceEECCCCCEEEEEeCCCCeEEE
Confidence 3456888888754 4555544 256666766544432211 12234566666 67766544 55789999
Q ss_pred EECCC-ceEEEE--------EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCccc------CeEEEE
Q psy9182 382 WNTSS-CEFVRT--------LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE------LVRCIR 444 (486)
Q Consensus 382 wd~~~-~~~~~~--------~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~------~v~~~~ 444 (486)
||..+ +..+.. +.++ ..+..+.++ ++++++...++.|.+||. +++.+..+..+.. .+.+++
T Consensus 209 ~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~ 286 (333)
T 2dg1_A 209 IALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQ 286 (333)
T ss_dssp EEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEE
T ss_pred EEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEE
Confidence 99863 332221 1222 345666664 777777777899999998 4777777654433 688899
Q ss_pred e--cCCEEEEEeCC
Q psy9182 445 F--DAKRIVSGAYD 456 (486)
Q Consensus 445 ~--~~~~l~s~~~d 456 (486)
| |++.|+.++.+
T Consensus 287 ~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 287 FIPGTNQLIICSND 300 (333)
T ss_dssp ECTTSCEEEEEEEC
T ss_pred ECCCCCEEEEEeCc
Confidence 9 66677666555
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.55 E-value=2.3e-12 Score=131.68 Aligned_cols=274 Identities=10% Similarity=0.013 Sum_probs=171.8
Q ss_pred CCccCcceEEEeecCc---eeeecc--cccccceeeec------CcccceeEEEeecceeEecCCCCceeccCcceee--
Q psy9182 111 LPNFDEKYIVSASGDR---TIKVWN--TSSCEFVRTLN------GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV-- 177 (486)
Q Consensus 111 ~~s~~~~~l~tg~~dg---~v~iWd--~~~~~~~~~l~------~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~-- 177 (486)
.++|+|++++....++ .-.||- ...++....+. +|...+..++|+ +|+++|+
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~S---------------PDG~~la~~ 138 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVS---------------WDGKKVAFA 138 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEEC---------------TTSSEEEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEEC---------------CCCCEEEEE
Confidence 4568999988866544 344454 33444333332 455567888887 6777787
Q ss_pred ---cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182 178 ---SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254 (486)
Q Consensus 178 ---s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 254 (486)
.|+.+..|++||+.++....... .........++++|++.|+.++.+.
T Consensus 139 ~~~~G~~~~~i~v~dl~tg~~~~~~~-----------------------------~~~~~~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 139 QKPNAADEAVLHVIDVDSGEWSKVDV-----------------------------IEGGKYATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp EEETTCSCCEEEEEETTTCCBCSSCC-----------------------------BSCCTTCCCEECTTSSEEEEEECCC
T ss_pred ECCCCCceEEEEEEECCCCCCcCCcc-----------------------------cCcccccceEEecCCCEEEEEEecC
Confidence 77778899999997755320000 0011113467889999999998877
Q ss_pred e-------------EEEEECCCce----eeEEEcCCcccEEEEEe--cCCEEEEEeCCC----cEEEEECCCCcEEEEec
Q psy9182 255 T-------------IKVWDRVSLQ----CIKVLTGHTGSVLCLQY--DERVIISGSSDS----TVRVWDVNTGEMVNTLI 311 (486)
Q Consensus 255 ~-------------i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~ 311 (486)
. |++|++.++. .+.....+...+.++.+ ||++|+.++.++ .|.+||..+++.. .+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~ 268 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV 268 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee
Confidence 6 9999998876 22233345456777777 788888777666 6788877665543 333
Q ss_pred ccCccEEEEEEcCCeEEEEeC----CCcEEEEECCCCCceeeEEeeecC-cccEEEEEe-CCCEEEEEeCCCcEEEEECC
Q psy9182 312 HHCEAVLHLRFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGH-RAAVNVVDF-DEKYIVSASGDRTIKVWNTS 385 (486)
Q Consensus 312 ~~~~~i~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~ 385 (486)
.+...+....+.++.++..+. ++.|.+||+.++...........+ ...+..+.+ ++.++++...|+..++|.+.
T Consensus 269 ~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 269 KGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp ECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred cCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEe
Confidence 344444444444433555443 578999999876531112223233 445666777 66677888888888887654
Q ss_pred -CceEEEEEcCC-cccEEEEEe--CCCEEEE-Ee---CCCcEEEEECCCCee
Q psy9182 386 -SCEFVRTLNGH-KRGIACLQY--RDRLVVS-GS---SDNTIRLWDIECGAC 429 (486)
Q Consensus 386 -~~~~~~~~~~~-~~~v~~~~~--~~~~l~~-~~---~dg~v~iwd~~~~~~ 429 (486)
+++....+..+ ...+..+.+ +++.++. .+ ..++|++||+.+++.
T Consensus 349 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 349 LKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 35556666655 455555655 4555553 32 347899999998774
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.55 E-value=1.3e-12 Score=122.25 Aligned_cols=226 Identities=12% Similarity=0.100 Sum_probs=153.7
Q ss_pred eEEEEeCCCEEEEEec----------CCeEEEEECCCceeeEEEcCC------cccE--EEEEecCCEEEEEeC--CCcE
Q psy9182 237 VYCLQYDDHKIVSGLR----------DNTIKVWDRVSLQCIKVLTGH------TGSV--LCLQYDERVIISGSS--DSTV 296 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~------~~~v--~~~~~~~~~l~~~~~--dg~i 296 (486)
-+++++++++++++.. ++.|.+||..+++.+..+... .... ..++.|+++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 5688999999998863 678999999999888877532 1222 344558999998864 5889
Q ss_pred EEEECCCCcEEEE-ecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCC-CCceeeEE---eeecCcccE-EEEEeCC
Q psy9182 297 RVWDVNTGEMVNT-LIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVS-PNEITLRR---VLVGHRAAV-NVVDFDE 367 (486)
Q Consensus 297 ~vwd~~~~~~~~~-~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~-~~~~~~~~---~~~~~~~~v-~~~~~~~ 367 (486)
.+||+.+++.+.. +.... ...+.+.+ ..+++.+.||.+.+|++.. ++...... .+......+ .....++
T Consensus 134 ~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred EEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC
Confidence 9999999988877 54322 12233333 3778888999999999865 33221111 111111111 1113356
Q ss_pred CEEEEEeCCCcEEEEECCCce--EEEEEcC------------CcccEEEEEeCCCEEEEEeC-----------CCcEEEE
Q psy9182 368 KYIVSASGDRTIKVWNTSSCE--FVRTLNG------------HKRGIACLQYRDRLVVSGSS-----------DNTIRLW 422 (486)
Q Consensus 368 ~~l~~~~~d~~i~iwd~~~~~--~~~~~~~------------~~~~v~~~~~~~~~l~~~~~-----------dg~v~iw 422 (486)
..++..+.++.+.++|+.... ....+.. .......+..+++.++++.. ++.|.+|
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 677777788999999987543 2222211 11112355566676666543 3589999
Q ss_pred ECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 423 d~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
|+.+++.+..+..+. +.+++| ||++|++++. +.|.+||+.++
T Consensus 292 D~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 292 DTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp ETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred ECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 999999999998877 889988 8999998887 99999999876
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.55 E-value=5.5e-12 Score=116.51 Aligned_cols=246 Identities=12% Similarity=0.092 Sum_probs=164.3
Q ss_pred ccccccCCccCcceEEEeecC------------------------ceeeecccccccceeeec-CcccceeEEEeeccee
Q psy9182 105 RDFISLLPNFDEKYIVSASGD------------------------RTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLV 159 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~d------------------------g~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~ 159 (486)
..+..++++++|+++++...+ +.|.+||..+++.+..+. ++-.....++++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d---- 99 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID---- 99 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC----
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC----
Confidence 346788899999999888777 479999999898877664 444567778886
Q ss_pred EecCCCCceeccCcceeecCCCCCcceeeeccccc-ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE
Q psy9182 160 VSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS-ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY 238 (486)
Q Consensus 160 ~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (486)
+++..+++...++.|++||..... ......... . .+. .........-+
T Consensus 100 -----------~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~--~------------~g~------~~~~~~~P~~i 148 (329)
T 3fvz_A 100 -----------TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM--Q------------PGS------DQNHFCQPTDV 148 (329)
T ss_dssp -----------TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTT--B------------CCC------STTCCSSEEEE
T ss_pred -----------CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccC--C------------CCC------CccccCCCcEE
Confidence 456667777788899999864321 110000000 0 000 00001123345
Q ss_pred EEEe-CCCEEEEEe-cCCeEEEEECCCceeeEEEcCC----------cccEEEEEe--c-CCEEEEEeCCCcEEEEECCC
Q psy9182 239 CLQY-DDHKIVSGL-RDNTIKVWDRVSLQCIKVLTGH----------TGSVLCLQY--D-ERVIISGSSDSTVRVWDVNT 303 (486)
Q Consensus 239 ~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~----------~~~v~~~~~--~-~~~l~~~~~dg~i~vwd~~~ 303 (486)
++++ ++..+++.+ .++.|++|| .+++.+..+... -.....+++ + +.++++...++.|++||..+
T Consensus 149 a~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 6677 677777775 689999999 567777666422 223677777 4 56666667788999999998
Q ss_pred CcEEEEec--ccCccEEEEEEcCCeEEEEe--------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE
Q psy9182 304 GEMVNTLI--HHCEAVLHLRFSNGMMVTCS--------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371 (486)
Q Consensus 304 ~~~~~~~~--~~~~~i~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 371 (486)
++.+..+. .+...+..+++.|+.++... .+..|++||..+++.........++......+++ +|.+++
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyv 307 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYI 307 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEE
T ss_pred CcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEE
Confidence 99888874 34567888888886554443 2347999999888765433222355566777777 666777
Q ss_pred EEeCCCcEEEEECCC
Q psy9182 372 SASGDRTIKVWNTSS 386 (486)
Q Consensus 372 ~~~~d~~i~iwd~~~ 386 (486)
+...++.|++|++..
T Consensus 308 ad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 308 GDAHTNTVWKFTLTE 322 (329)
T ss_dssp EESSSCCEEEEEEEE
T ss_pred EECCCCEEEEEeCCc
Confidence 777888999998753
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.54 E-value=1.6e-12 Score=132.32 Aligned_cols=222 Identities=12% Similarity=0.048 Sum_probs=148.8
Q ss_pred eCCCE-EEEEec-CCeEEEEECC--C-ceeeEEEcC-----CcccEEEEEe--cCCEEEEEeCC----------CcEEEE
Q psy9182 242 YDDHK-IVSGLR-DNTIKVWDRV--S-LQCIKVLTG-----HTGSVLCLQY--DERVIISGSSD----------STVRVW 299 (486)
Q Consensus 242 ~~~~~-l~~~~~-dg~i~i~d~~--~-~~~~~~~~~-----~~~~v~~~~~--~~~~l~~~~~d----------g~i~vw 299 (486)
||++. |+.++. +..|.++++. . ++ ...+.. |...+.+++| ||+.|++++.+ ..|++|
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 88988 666543 5667777765 2 33 445554 5566777777 89999988876 589999
Q ss_pred ECCC------CcEEEEec-ccCccEEEEEEcCC--eEEEEeCC--------CcEEEEECC-CCCceeeEEeeecCcccEE
Q psy9182 300 DVNT------GEMVNTLI-HHCEAVLHLRFSNG--MMVTCSKD--------RSIAVWDMV-SPNEITLRRVLVGHRAAVN 361 (486)
Q Consensus 300 d~~~------~~~~~~~~-~~~~~i~~~~~~~~--~l~~~~~d--------g~i~i~d~~-~~~~~~~~~~~~~~~~~v~ 361 (486)
|+.+ ++. ..+. .+...+..+.|+++ .|+.++.+ ..|++||+. ++..........++...+.
T Consensus 167 ~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 167 PLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp ETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred ECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 9987 554 4454 55567777888865 67766644 379999998 4522222233444567788
Q ss_pred EEEe--CCCEEEEEeCCC--cEEEEECCCceEEEEEcCCccc--------EEEEEe--CCCEEEEEeCCCcEEEE--ECC
Q psy9182 362 VVDF--DEKYIVSASGDR--TIKVWNTSSCEFVRTLNGHKRG--------IACLQY--RDRLVVSGSSDNTIRLW--DIE 425 (486)
Q Consensus 362 ~~~~--~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~--~~~~l~~~~~dg~v~iw--d~~ 425 (486)
.+.| ||+++++++.++ .|.+||+.+++.......+... +..+.+ ++.++++++. +.++|| |+.
T Consensus 246 ~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~ 324 (662)
T 3azo_A 246 QAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPE 324 (662)
T ss_dssp EEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETT
T ss_pred ceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECC
Confidence 8887 788888888888 6777777677654433333221 344555 5788888888 999999 666
Q ss_pred CCeeeEEecCcccCeEEE-EecCCEE--EEEeCCC--cEEEEeCCCC
Q psy9182 426 CGACLRVLEGHEELVRCI-RFDAKRI--VSGAYDG--KIKVWNLVAA 467 (486)
Q Consensus 426 ~~~~~~~~~~h~~~v~~~-~~~~~~l--~s~~~dg--~v~iwdl~~~ 467 (486)
+++ +..+..|...+..+ +++++.+ ++++.+. .|.+||+.++
T Consensus 325 ~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 325 SGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp TTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred CCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 555 67788888888888 8877653 3444454 4555565554
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.54 E-value=8.5e-12 Score=116.16 Aligned_cols=214 Identities=13% Similarity=0.173 Sum_probs=135.7
Q ss_pred EEEeCCCEEEEEecC---C--eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC-------------------
Q psy9182 239 CLQYDDHKIVSGLRD---N--TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS------------------- 292 (486)
Q Consensus 239 ~~~~~~~~l~~~~~d---g--~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~------------------- 292 (486)
+++|||+.|+..+.+ + .|.+||+.+++.......+ . +..+.| |++.|+.++.
T Consensus 65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 142 (347)
T 2gop_A 65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFD 142 (347)
T ss_dssp EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC--
T ss_pred EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeec
Confidence 345566655555432 2 3666777766655544433 2 666666 6676666653
Q ss_pred --------CCcEEEEECCCCcEEEEecccCccEEEEEEcCC-eEEEEeCCC-------cEEEEECCCCCceeeEEeeecC
Q psy9182 293 --------DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-MMVTCSKDR-------SIAVWDMVSPNEITLRRVLVGH 356 (486)
Q Consensus 293 --------dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~ 356 (486)
...|.+||+.+++.+..+.. . .+..+.|+++ .++++..++ ...+|.+.+++ .. . +..+
T Consensus 143 g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~--~-l~~~ 216 (347)
T 2gop_A 143 DLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EE--K-MFEK 216 (347)
T ss_dssp -------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EE--E-EEEE
T ss_pred CcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eE--E-eccC
Confidence 25799999998887455544 3 6778888876 555554432 34444444332 22 1 1222
Q ss_pred cccEEEEEeCCCEEEEEeCC--------CcEEEEECCCceEEEEEcCCcccEEE-EEeCCCEEEEEeCCCcEEEEECCCC
Q psy9182 357 RAAVNVVDFDEKYIVSASGD--------RTIKVWNTSSCEFVRTLNGHKRGIAC-LQYRDRLVVSGSSDNTIRLWDIECG 427 (486)
Q Consensus 357 ~~~v~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iwd~~~~ 427 (486)
..+..++++|++|+.++.+ ..|.+|| +++.......+...+.. +.|++.++++++.++.+++| +.++
T Consensus 217 -~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 217 -VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp -ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-EESS
T ss_pred -cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCcEEEEEecCCcEEEE-EcCC
Confidence 4455567799988877654 3688888 56654444556666765 66753388889999999999 8766
Q ss_pred eeeEEecCcccCeEEEEecCCEEEEEeCCCcE-EEEeCC
Q psy9182 428 ACLRVLEGHEELVRCIRFDAKRIVSGAYDGKI-KVWNLV 465 (486)
Q Consensus 428 ~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v-~iwdl~ 465 (486)
+... +..+...|.+++|++..+++++.++.. .+|.++
T Consensus 293 ~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 293 EIKP-IAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SEEE-EECSSSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred ceEE-EecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 6544 444577899999955667777777765 788775
No 180
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.51 E-value=1.4e-12 Score=134.21 Aligned_cols=264 Identities=10% Similarity=0.058 Sum_probs=162.8
Q ss_pred cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEE
Q psy9182 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIV 248 (486)
Q Consensus 171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~ 248 (486)
+|+.+++++ |++|++||+.++.......... ........ ..++|||++|+
T Consensus 26 ~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~Spdg~~l~ 77 (740)
T 4a5s_A 26 SDHEYLYKQ--ENNILVFNAEYGNSSVFLENST--------------------------FDEFGHSINDYSISPDGQFIL 77 (740)
T ss_dssp SSSEEEEEE--TTEEEEEETTTCCEEEEECTTT--------------------------TTTCCSCCCEEEECTTSSEEE
T ss_pred CCCcEEEEc--CCcEEEEECCCCceEEEEechh--------------------------hhhhcccccceEECCCCCEEE
Confidence 567777775 8999999987654332211110 00111222 67899999999
Q ss_pred EEecC---------CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe-cccCcc
Q psy9182 249 SGLRD---------NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEA 316 (486)
Q Consensus 249 ~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~ 316 (486)
.++.+ +.+.+||+.+++... +..|...+...+| ||+.|+.+. ++.|++||+.+++..+.. .++...
T Consensus 78 ~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~ 155 (740)
T 4a5s_A 78 LEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDI 155 (740)
T ss_dssp EEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTT
T ss_pred EEECCeeeEEEccceEEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccc
Confidence 98876 567799999998654 5567777888777 889888874 689999999888754422 222222
Q ss_pred E-----------------EEEEEcCC--eEEEEeCCC------------------------------------cEEEEEC
Q psy9182 317 V-----------------LHLRFSNG--MMVTCSKDR------------------------------------SIAVWDM 341 (486)
Q Consensus 317 i-----------------~~~~~~~~--~l~~~~~dg------------------------------------~i~i~d~ 341 (486)
+ ..+.|+|+ .|+.++.|. .|++||+
T Consensus 156 ~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~ 235 (740)
T 4a5s_A 156 IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT 235 (740)
T ss_dssp EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET
T ss_pred eecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC
Confidence 2 24778865 566654221 4788898
Q ss_pred CC---CCceeeEEeee-----cCcccEEEEEe--CCCEEEEEeC----CCcEEEEECCCce----EE--EEE--cCCccc
Q psy9182 342 VS---PNEITLRRVLV-----GHRAAVNVVDF--DEKYIVSASG----DRTIKVWNTSSCE----FV--RTL--NGHKRG 399 (486)
Q Consensus 342 ~~---~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~----d~~i~iwd~~~~~----~~--~~~--~~~~~~ 399 (486)
.+ ++......... ++...+..+.| ||+.++.... +..|.+||+.+++ +. ..+ ..|...
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~ 315 (740)
T 4a5s_A 236 DSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW 315 (740)
T ss_dssp TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence 87 63211112211 36677888888 8886665432 3369999998887 21 222 344433
Q ss_pred EE-------EEEeCCCEEE-EEeC-C--CcEEEEECCCCeeeEEecCcccCeEEEE-ecCCEEEEEeCC-----CcEEEE
Q psy9182 400 IA-------CLQYRDRLVV-SGSS-D--NTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAYD-----GKIKVW 462 (486)
Q Consensus 400 v~-------~~~~~~~~l~-~~~~-d--g~v~iwd~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~~~d-----g~v~iw 462 (486)
+. .++.+|+.++ ..+. + ..|++||+.+++.. .+......|..+. +|++.|+..+.. +..+||
T Consensus 316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly 394 (740)
T 4a5s_A 316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLY 394 (740)
T ss_dssp SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEE
T ss_pred EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEE
Confidence 32 3344688776 6654 3 45888898866654 4444455565554 587776655443 344555
Q ss_pred eCC
Q psy9182 463 NLV 465 (486)
Q Consensus 463 dl~ 465 (486)
.+.
T Consensus 395 ~v~ 397 (740)
T 4a5s_A 395 KIQ 397 (740)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 181
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.51 E-value=3.6e-11 Score=111.00 Aligned_cols=281 Identities=16% Similarity=0.082 Sum_probs=186.8
Q ss_pred cccCCccCcceEEEeec-----CceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC--
Q psy9182 108 ISLLPNFDEKYIVSASG-----DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS-- 180 (486)
Q Consensus 108 ~~~~~s~~~~~l~tg~~-----dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s-- 180 (486)
...++.|+++.+..... ++.|.+.|..+++.+.++..-..+ . ++++ +|++.++.++
T Consensus 36 ~~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~s---------------pDG~~lyVan~~ 98 (386)
T 3sjl_D 36 ILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVA---------------DDGSFIAHASTV 98 (386)
T ss_dssp BCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEEC---------------TTSSCEEEEEEE
T ss_pred eeeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEEC---------------CCCCEEEEEccc
Confidence 34678899998888765 689999999999999888754444 3 7776 5666665554
Q ss_pred --------CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc------CCCccceEEEEeCCCE
Q psy9182 181 --------HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR------SENSKGVYCLQYDDHK 246 (486)
Q Consensus 181 --------~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~ 246 (486)
.++.|.+||..+..... .+... .+....-+.+++||++
T Consensus 99 ~~r~~~G~~~~~VsviD~~t~~v~~----------------------------~I~v~~g~r~~~g~~P~~~a~spDGk~ 150 (386)
T 3sjl_D 99 FSRIARGERTDYVEVFDPVTLLPTA----------------------------DIELPDAPRFLVGTYPWMTSLTPDGKT 150 (386)
T ss_dssp EEETTEEEEEEEEEEECTTTCCEEE----------------------------EEEETTCCCCCBSCCGGGEEECTTSSE
T ss_pred ccccccCCCCCEEEEEECCCCeEEE----------------------------EEECCCccccccCCCCceEEEcCCCCE
Confidence 36789999986644322 11111 0223455788999999
Q ss_pred EEEEec--CCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCC-CcEEEEeccc----CccEE
Q psy9182 247 IVSGLR--DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNT-GEMVNTLIHH----CEAVL 318 (486)
Q Consensus 247 l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~----~~~i~ 318 (486)
++++.. ++.|.++|+.+++.+.++.... ...+.. ..+.+++.+.||.+.+.++.+ ++........ ...+.
T Consensus 151 lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~ 228 (386)
T 3sjl_D 151 LLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLI 228 (386)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBC
T ss_pred EEEEEcCCCCeEEEEECCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccc
Confidence 988864 6899999999999999886432 122223 567777888999999999976 5553322111 11121
Q ss_pred -EEEEc--CCeEEEEeCCCcEEEEECCCCCce--eeEEee---------ecCcccEEEEEeCCCEEEEEeC---------
Q psy9182 319 -HLRFS--NGMMVTCSKDRSIAVWDMVSPNEI--TLRRVL---------VGHRAAVNVVDFDEKYIVSASG--------- 375 (486)
Q Consensus 319 -~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~---------~~~~~~v~~~~~~~~~l~~~~~--------- 375 (486)
...|. .+.++..+.+|.|++.|+.+.... .....+ .........+..+++.++....
T Consensus 229 ~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 229 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp SCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred ccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 13442 445666777899999999765421 111100 0112233455567777777642
Q ss_pred -CCcEEEEECCCceEEEEEcCCcccEEEEEe--CCC-EEEEEe-CCCcEEEEECCCCeeeEEecCc
Q psy9182 376 -DRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDR-LVVSGS-SDNTIRLWDIECGACLRVLEGH 436 (486)
Q Consensus 376 -d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~~~h 436 (486)
.+.|.+.|+.+++.+..+.... .+..+.+ +++ +|++.. .++.|.++|..+++.+.++..-
T Consensus 309 ~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred CCCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 2579999999999999887432 3434444 665 666654 5899999999999999888643
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=1.9e-11 Score=109.46 Aligned_cols=227 Identities=13% Similarity=0.108 Sum_probs=150.8
Q ss_pred CcceEEEeecCceeeecccccccceeeecCcc-cceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccc
Q psy9182 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNY 193 (486)
Q Consensus 115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~-~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~ 193 (486)
.+++|++++.|+.|.+||.++|+.+..+..+. ..+.++.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~--------------------------------------- 44 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAA--------------------------------------- 44 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEE---------------------------------------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEE---------------------------------------
Confidence 45789999999999999999999887776554 23333333
Q ss_pred cccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC
Q psy9182 194 SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH 273 (486)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 273 (486)
.++|+.++ +.++.|..||. +++.+..+..+
T Consensus 45 -----------------------------------------------~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 45 -----------------------------------------------TKAGEILF--SYSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp -----------------------------------------------CTTSCEEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred -----------------------------------------------CCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence 34555555 34567888887 78888777754
Q ss_pred c-ccEEEEEe--cCCEEEEEeC-CCcEEEEECCCCcEEEEecccC------ccEEEEEE--cCCeEEEEeCCCcEEEEEC
Q psy9182 274 T-GSVLCLQY--DERVIISGSS-DSTVRVWDVNTGEMVNTLIHHC------EAVLHLRF--SNGMMVTCSKDRSIAVWDM 341 (486)
Q Consensus 274 ~-~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~------~~i~~~~~--~~~~l~~~~~dg~i~i~d~ 341 (486)
. ..+.++.+ +++.+++.+. ++.|..+|. +|+.+..+.... .....+.+ .++++++...++.|..||.
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 2 35666665 8889888877 778888886 677777664211 12222333 3458888888999999998
Q ss_pred CCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc------cEEEEEe--CCCEEE
Q psy9182 342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR------GIACLQY--RDRLVV 411 (486)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------~v~~~~~--~~~~l~ 411 (486)
. ++.+..... . ....++.. +++.++++..++.|..+|..+++.+.++..+.. .+..+.. +|++++
T Consensus 154 ~-G~~~w~~~~---~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v 228 (276)
T 3no2_A 154 N-GQLLNSVKL---S-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI 228 (276)
T ss_dssp T-SCEEEEEEC---S-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred C-CCEEEEEEC---C-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEE
Confidence 7 765432221 1 12222333 788999888888999999999999998864321 1444444 477776
Q ss_pred EEeCC--------CcEEEEEC-CCCeeeEEecCc
Q psy9182 412 SGSSD--------NTIRLWDI-ECGACLRVLEGH 436 (486)
Q Consensus 412 ~~~~d--------g~v~iwd~-~~~~~~~~~~~h 436 (486)
+.... +..+++++ .+|+.+..+..+
T Consensus 229 ~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~ 262 (276)
T 3no2_A 229 CNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDK 262 (276)
T ss_dssp EEECTTCTTGGGSCCCSEEEECTTSBEEEEECCT
T ss_pred EeccCccccccccCCceEEEECCCCCEEEEecCc
Confidence 66421 23455655 567777777654
No 183
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.50 E-value=2.2e-11 Score=110.01 Aligned_cols=234 Identities=10% Similarity=0.125 Sum_probs=148.2
Q ss_pred ccccccCCccCcceEEEeecCceeeecccccccceeeec------CcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN------GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~------~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s 178 (486)
..+.++++++++.++++...++.|.+||.. ++.+..+. +|...+..+++.+ .++..+++
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~--------------~~g~l~v~ 94 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVR--------------NSGDIIVT 94 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEET--------------TTTEEEEE
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEc--------------CCCeEEEE
Confidence 346677888999988888889999999987 66666653 2344567777731 23334444
Q ss_pred CCC-CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182 179 SSH-DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK 257 (486)
Q Consensus 179 ~s~-dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 257 (486)
... ++.|.+||.. +... ..+.........-+++.++++.+++...++.|.
T Consensus 95 ~~~~~~~i~~~d~~-g~~~----------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 145 (286)
T 1q7f_A 95 ERSPTHQIQIYNQY-GQFV----------------------------RKFGATILQHPRGVTVDNKGRIIVVECKVMRVI 145 (286)
T ss_dssp ECGGGCEEEEECTT-SCEE----------------------------EEECTTTCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred cCCCCCEEEEECCC-CcEE----------------------------EEecCccCCCceEEEEeCCCCEEEEECCCCEEE
Confidence 433 7788888832 1111 111111112223455667888777777889999
Q ss_pred EEECCCceeeEEEc--CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc--CccEEEEEEcCC--eEEE
Q psy9182 258 VWDRVSLQCIKVLT--GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH--CEAVLHLRFSNG--MMVT 329 (486)
Q Consensus 258 i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~i~~~~~~~~--~l~~ 329 (486)
+||.. ++.+..+. .+...+.++++ +++++++...++.|++||. +++.+..+... ...+..++++++ ++++
T Consensus 146 ~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~ 223 (286)
T 1q7f_A 146 IFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIA 223 (286)
T ss_dssp EECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEE
T ss_pred EEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEE
Confidence 99954 55555554 34456788888 4666666677899999997 46666666443 356788998753 4555
Q ss_pred EeCCC-cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc
Q psy9182 330 CSKDR-SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC 387 (486)
Q Consensus 330 ~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~ 387 (486)
...++ .|.+||.. ++....... ......+..+++ +++++++ +.++.|++|+....
T Consensus 224 ~~~~~~~i~~~~~~-g~~~~~~~~-~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 224 DNHNNFNLTIFTQD-GQLISALES-KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ECSSSCEEEEECTT-SCEEEEEEE-SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred eCCCCEEEEEECCC-CCEEEEEcc-cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 55565 99999964 333322211 112223556666 6665555 67899999997654
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.49 E-value=8.6e-12 Score=115.04 Aligned_cols=269 Identities=12% Similarity=0.070 Sum_probs=172.3
Q ss_pred ecCceeeecccccccceeeecC------cccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccccc
Q psy9182 123 SGDRTIKVWNTSSCEFVRTLNG------HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSET 196 (486)
Q Consensus 123 ~~dg~v~iWd~~~~~~~~~l~~------h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~ 196 (486)
+.+++|.++|..+++....+.. .......+.+. ++..+++...++.|.+||..+.+..
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~----------------~~~lyv~~~~~~~v~viD~~t~~~~ 77 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR----------------DGIGWIVVNNSHVIFAIDINTFKEV 77 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE----------------TTEEEEEEGGGTEEEEEETTTCCEE
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE----------------CCEEEEEEcCCCEEEEEECcccEEE
Confidence 3489999999999987665421 11223455553 3334455556789999997654321
Q ss_pred ccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCCeEEEEECCCceeeEEEcCCc-
Q psy9182 197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDNTIKVWDRVSLQCIKVLTGHT- 274 (486)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~- 274 (486)
..+. ......-+++++++ .++++. .++.|.+||..+++....+....
T Consensus 78 ----------------------------~~i~--~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~ 126 (328)
T 3dsm_A 78 ----------------------------GRIT--GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDM 126 (328)
T ss_dssp ----------------------------EEEE--CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTC
T ss_pred ----------------------------EEcC--CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCc
Confidence 1121 11223345566777 455554 78999999999999887776433
Q ss_pred ----ccEEEEEecCCEEEEEe--CCCcEEEEECCCCcEEEEecccCccEEEEEEcC-CeEEEEeC-C----------CcE
Q psy9182 275 ----GSVLCLQYDERVIISGS--SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSK-D----------RSI 336 (486)
Q Consensus 275 ----~~v~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~-d----------g~i 336 (486)
.....+.+++..++++. .++.|.++|+.+++.+..+.... ....+.+++ +.+++++. + +.|
T Consensus 127 ~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 127 DMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp CTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred cccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceE
Confidence 13445555666666665 48899999999999888776532 345667765 35555443 3 689
Q ss_pred EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE--EcCCcccEEEEEeC---CCE
Q psy9182 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT--LNGHKRGIACLQYR---DRL 409 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~---~~~ 409 (486)
.++|..+++...... .........+++ ++++++++.. .|.+||..+++.... +.........+.++ +.+
T Consensus 206 ~~id~~t~~v~~~~~--~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~l 281 (328)
T 3dsm_A 206 YRIDAETFTVEKQFK--FKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEV 281 (328)
T ss_dssp EEEETTTTEEEEEEE--CCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCE
T ss_pred EEEECCCCeEEEEEe--cCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeE
Confidence 999998776442222 111224566776 5788888755 899999998875421 12223456677774 455
Q ss_pred EEEE----eCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182 410 VVSG----SSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445 (486)
Q Consensus 410 l~~~----~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~ 445 (486)
.++. ..++.|.+||.. |+.+..+.. ......++|
T Consensus 282 yva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 282 YVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp EEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred EEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence 6665 578999999998 998888763 233455555
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.49 E-value=4e-12 Score=120.61 Aligned_cols=286 Identities=14% Similarity=0.015 Sum_probs=164.7
Q ss_pred ccccCCccCcceEEEeecC---ceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182 107 FISLLPNFDEKYIVSASGD---RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD 183 (486)
Q Consensus 107 ~~~~~~s~~~~~l~tg~~d---g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg 183 (486)
+....++|||++|+..... ..|.+||+.+++......++......+.|+ +|++.|+.++.++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~s---------------pdg~~l~~~~~~~ 102 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIS---------------TDERAFFYVKNEL 102 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEEC---------------TTSSEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceEC---------------CCCCEEEEEEcCC
Confidence 6677899999998876443 478888998887554444333223335565 6778888888888
Q ss_pred cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccc-----eEEEEeCCCEEEEE-----ecC
Q psy9182 184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKG-----VYCLQYDDHKIVSG-----LRD 253 (486)
Q Consensus 184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~l~~~-----~~d 253 (486)
.|.+||+.++.......... .|.... ..+......... ...++++++.++.. ..+
T Consensus 103 ~l~~~d~~~~~~~~~~~~~~------------~~~~~g---~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~ 167 (396)
T 3c5m_A 103 NLMKVDLETLEEQVIYTVDE------------EWKGYG---TWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPT 167 (396)
T ss_dssp EEEEEETTTCCEEEEEECCT------------TEEEEE---EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCC
T ss_pred cEEEEECCCCCcEEEEeccc------------ccCCCC---CEEEeccCCccccccccccccCCCCcceeeeeeccCCCc
Confidence 89999986644322211110 010000 000000000000 01234566665543 356
Q ss_pred CeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCC------CcEEEEECCCCcEEEEeccc--CccEEEEEE
Q psy9182 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSD------STVRVWDVNTGEMVNTLIHH--CEAVLHLRF 322 (486)
Q Consensus 254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~--~~~i~~~~~ 322 (486)
..|.+||+.+++..... .+...+..+.| +++.++..+.+ ..|.+||+.+++... +..+ ...+..+.|
T Consensus 168 ~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~ 245 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFW 245 (396)
T ss_dssp EEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEE
T ss_pred ceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEE
Confidence 68999999988765554 35556766666 46666665543 368899987665433 3222 235777889
Q ss_pred cCC--eEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEe----------------CCCc
Q psy9182 323 SNG--MMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSAS----------------GDRT 378 (486)
Q Consensus 323 ~~~--~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~----------------~d~~ 378 (486)
+++ .++.++.+ +.|++||+.+++..... ...+. . ..... ++++++.++ .+..
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~--~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 246 IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMPPC--S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECCSE--E-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred CCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCCCC--C-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 864 55555433 44999999887643221 11221 1 34455 888888754 3478
Q ss_pred EEEEECCCceEEEEEcCCccc-----------EE--EEEeCCCEEEEEeC-CCcEE--EEECCCCee
Q psy9182 379 IKVWNTSSCEFVRTLNGHKRG-----------IA--CLQYRDRLVVSGSS-DNTIR--LWDIECGAC 429 (486)
Q Consensus 379 i~iwd~~~~~~~~~~~~~~~~-----------v~--~~~~~~~~l~~~~~-dg~v~--iwd~~~~~~ 429 (486)
|++||+.+++.. .+..+... +. .++.+++.|+.++. ++... ++++.+++.
T Consensus 322 i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 322 LYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp EEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred EEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 999999887653 34433331 22 34446887777664 45544 445555544
No 186
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.48 E-value=1.1e-11 Score=114.39 Aligned_cols=291 Identities=11% Similarity=-0.024 Sum_probs=186.3
Q ss_pred cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccc
Q psy9182 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSE 195 (486)
Q Consensus 116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~ 195 (486)
+..|..++.++.|..|| .+++.+..+..+...+.++... .+..++.++.+ +..+|. ++..
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~----------------~~g~l~v~t~~--l~~~d~-~g~~ 89 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIG----------------KDGTIYFGSDK--VYAINP-DGTE 89 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEET----------------TTTEECCSSCE--EEEECC-CGGG
T ss_pred CCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEe----------------cCCcEEEecCc--EEEECC-CCcE
Confidence 33677778889999999 8888776665444444444442 12234444444 666664 2222
Q ss_pred cccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcc
Q psy9182 196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG 275 (486)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (486)
........ .......+ .+..+.+++.++.|..+|.. ++.......+..
T Consensus 90 ~~~~~~~~-----------------------------~~~~~~~~--~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~ 137 (330)
T 3hxj_A 90 KWRFDTKK-----------------------------AIVSDFTI--FEDILYVTSMDGHLYAINTD-GTEKWRFKTKKA 137 (330)
T ss_dssp GGGSCC----------------------------------CCEEE--ETTEEEEECTTSEEEEECTT-SCEEEEEECSSC
T ss_pred EEEEECCC-----------------------------CcccCceE--ECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCc
Confidence 11111000 00011112 26678888889999999988 777766665555
Q ss_pred cEEEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEee
Q psy9182 276 SVLCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353 (486)
Q Consensus 276 ~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 353 (486)
.+.++..+ +..++.++.++.|..+|.. ++....+......+.++... ++.+++++ +.|..+| .+++... ..
T Consensus 138 ~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~---~~ 210 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKW---NF 210 (330)
T ss_dssp CCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEE---EE
T ss_pred eeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEE---EE
Confidence 45555553 4557778888999999998 88777776555566666674 56777777 8899999 5554332 12
Q ss_pred ecCcccEEEEEeCC-CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeE
Q psy9182 354 VGHRAAVNVVDFDE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLR 431 (486)
Q Consensus 354 ~~~~~~v~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~ 431 (486)
......+.++..++ ..+..++.++.|..+|. +++.+..+......+..+..+ +..|..++.+|.|..+|. +++.+.
T Consensus 211 ~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~ 288 (330)
T 3hxj_A 211 YAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKW 288 (330)
T ss_dssp CCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEE
T ss_pred ccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEE
Confidence 22334455666643 36777778888999984 566666665444433444444 667888888999999996 688777
Q ss_pred EecCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 432 VLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 432 ~~~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.+......+.++.. .+..|..++.+|.+++...+..
T Consensus 289 ~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 289 NFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp EEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred EEEcCCccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence 77665666777777 5566888999999999887644
No 187
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.47 E-value=5.8e-10 Score=104.29 Aligned_cols=280 Identities=8% Similarity=-0.043 Sum_probs=173.4
Q ss_pred CCccCcceEEEeec--Cc---eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC-----
Q psy9182 111 LPNFDEKYIVSASG--DR---TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS----- 180 (486)
Q Consensus 111 ~~s~~~~~l~tg~~--dg---~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s----- 180 (486)
.+.|+++++..... .. .|.++|..+++.+.++.....+ .++++ +|++.++.+.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~s---------------pDg~~lyv~n~~~~~ 89 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAA---------------HSGSEFALASTSFSR 89 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEEC---------------CCCCEEEEEeccccc
Confidence 55678887777654 33 8899999999988887654433 66665 4665555553
Q ss_pred -----CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec--C
Q psy9182 181 -----HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR--D 253 (486)
Q Consensus 181 -----~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~--d 253 (486)
.++.|.+||..+.+......... . .+ ........-+.++++|++|+++.. +
T Consensus 90 ~~rg~~~~~v~viD~~t~~~~~~i~~~~-----------------~---~~--~~~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 90 IAKGKRTDYVEVFDPVTFLPIADIELPD-----------------A---PR--FDVGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred cccCCCCCeEEEEECCCCcEEEEEECCC-----------------c---cc--cccCCCccceEECCCCCEEEEEecCCC
Confidence 36789999975543222111000 0 00 000112235678999999998874 5
Q ss_pred CeEEEEECCCceeeEE-EcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEec-----ccCccE-EEEEEc--C
Q psy9182 254 NTIKVWDRVSLQCIKV-LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI-----HHCEAV-LHLRFS--N 324 (486)
Q Consensus 254 g~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-----~~~~~i-~~~~~~--~ 324 (486)
+.|.++| .+++.+.. +... ..+.........+++.+.||.+.++|. +++...... ....++ ....+. +
T Consensus 148 ~~v~viD-~t~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSSP-TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCCC-ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence 7899999 99998877 6532 222222224456677788999999999 887764322 111121 122222 3
Q ss_pred CeEEEEeCCCcEEEEECCCCCceeeEEe--ee---------cCcccEEEEEeCCCEEEEEeC----------CCcEEEEE
Q psy9182 325 GMMVTCSKDRSIAVWDMVSPNEITLRRV--LV---------GHRAAVNVVDFDEKYIVSASG----------DRTIKVWN 383 (486)
Q Consensus 325 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~---------~~~~~v~~~~~~~~~l~~~~~----------d~~i~iwd 383 (486)
+.++..+.++.+.+.|+........... .. ........+..+++.++++.. .+.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 3444445778999999876532111110 00 011112334447777777643 35799999
Q ss_pred CCCceEEEEEcCCcccEEEEEe--CCC-EEEEEe-CCCcEEEEECCCCeeeEEe
Q psy9182 384 TSSCEFVRTLNGHKRGIACLQY--RDR-LVVSGS-SDNTIRLWDIECGACLRVL 433 (486)
Q Consensus 384 ~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~ 433 (486)
..+++.+.++.... ....+.+ +++ +++++. .++.|.++|+.+++.+..+
T Consensus 305 ~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 305 GLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 99999999886433 3444444 677 677776 5899999999999998874
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.47 E-value=1.4e-10 Score=118.89 Aligned_cols=227 Identities=13% Similarity=0.087 Sum_probs=151.8
Q ss_pred EEEEeCCCEEEEEecCC-----eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCc---------------
Q psy9182 238 YCLQYDDHKIVSGLRDN-----TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDST--------------- 295 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~--------------- 295 (486)
.+++|||++|+.+..++ .|++||+.+++.......+ ..+..++| |++.|+.++.++.
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence 46778999888776543 8999999999877643222 22445666 8899998888766
Q ss_pred -EEEEECCCCcE----EEEecccCccEEEEEEcCC--eEEEEeC-----CCcEEEEECCC------CC-ceeeEEeeecC
Q psy9182 296 -VRVWDVNTGEM----VNTLIHHCEAVLHLRFSNG--MMVTCSK-----DRSIAVWDMVS------PN-EITLRRVLVGH 356 (486)
Q Consensus 296 -i~vwd~~~~~~----~~~~~~~~~~i~~~~~~~~--~l~~~~~-----dg~i~i~d~~~------~~-~~~~~~~~~~~ 356 (486)
|++|++.+++. +.....+...+..+.++++ .++.++. +..|++||+.+ +. .. ..+..+
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~---~~l~~~ 285 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW---VKLIDN 285 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC---EEEECS
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce---EEeeCC
Confidence 99999988762 2222334455778888865 5655543 57899999976 42 12 222233
Q ss_pred cccE-EEEEeCCCEEEEEeCC----CcEEEEECCCce--EEEEEcCCcc--cEEEEEeC--CCEEEEEeCCCc--EEEEE
Q psy9182 357 RAAV-NVVDFDEKYIVSASGD----RTIKVWNTSSCE--FVRTLNGHKR--GIACLQYR--DRLVVSGSSDNT--IRLWD 423 (486)
Q Consensus 357 ~~~v-~~~~~~~~~l~~~~~d----~~i~iwd~~~~~--~~~~~~~~~~--~v~~~~~~--~~~l~~~~~dg~--v~iwd 423 (486)
...+ ..+..+|+.|+..+.. +.|.+||+.++. ....+..|.. .+..+.+. +.++++...|+. |.+||
T Consensus 286 ~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 286 FEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp SSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEE
Confidence 3333 3345578877766553 369999998764 2344444443 56666664 456777777874 66678
Q ss_pred CCCCeeeEEecCcccCeEEEEe--cCCEEEEE-e---CCCcEEEEeCCCCC
Q psy9182 424 IECGACLRVLEGHEELVRCIRF--DAKRIVSG-A---YDGKIKVWNLVAAL 468 (486)
Q Consensus 424 ~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~-~---~dg~v~iwdl~~~~ 468 (486)
+.+|+.+..+..+...+..+.+ +++.++.. + ..++|..||+.++.
T Consensus 366 ~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 366 LATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 7778888888888778888888 66655533 3 35789999998764
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.45 E-value=1.5e-10 Score=113.83 Aligned_cols=264 Identities=13% Similarity=0.141 Sum_probs=177.8
Q ss_pred CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe
Q psy9182 172 DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL 251 (486)
Q Consensus 172 ~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 251 (486)
++..+++...+++|.++|..+.+.. ..+.. +.....+.++++++++++++
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~----------------------------~~i~~--g~~p~~v~~SpDGr~lyv~~ 215 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIK----------------------------TVLDT--GYAVHISRLSASGRYLFVIG 215 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEE----------------------------EEEEC--SSCEEEEEECTTSCEEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEE----------------------------EEEeC--CCCccceEECCCCCEEEEEc
Confidence 3456777888999999997654322 22221 11223567889999999999
Q ss_pred cCCeEEEEECC--CceeeEEEcCCcccE-EEEE----ecCCEEEEEeC-CCcEEEEECCCCcEEEEeccc----------
Q psy9182 252 RDNTIKVWDRV--SLQCIKVLTGHTGSV-LCLQ----YDERVIISGSS-DSTVRVWDVNTGEMVNTLIHH---------- 313 (486)
Q Consensus 252 ~dg~i~i~d~~--~~~~~~~~~~~~~~v-~~~~----~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~---------- 313 (486)
.++.|.+||+. +++.+..+.....+. ..++ .||+++++++. ++.|.++|..+.+.+..+...
T Consensus 216 ~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~ 295 (567)
T 1qks_A 216 RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH 295 (567)
T ss_dssp TTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred CCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccccccc
Confidence 99999999995 788887776543332 3344 36788777665 599999999999998876432
Q ss_pred -CccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCC
Q psy9182 314 -CEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSS 386 (486)
Q Consensus 314 -~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~ 386 (486)
...+..+..+++ .++....+|.|.++|....+....... ........+.| ++++++++. .++.|.++|+.+
T Consensus 296 p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 296 PEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred CCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 125666766643 556666789999999987654432222 12223344455 788877665 578999999999
Q ss_pred ceEEEEEcC-----Ccc-cEEEEEeC-CCEEEEEe-CCCcEEEEECCC-------CeeeEEecCcccCeEEEEe--cCCE
Q psy9182 387 CEFVRTLNG-----HKR-GIACLQYR-DRLVVSGS-SDNTIRLWDIEC-------GACLRVLEGHEELVRCIRF--DAKR 449 (486)
Q Consensus 387 ~~~~~~~~~-----~~~-~v~~~~~~-~~~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~--~~~~ 449 (486)
++.+..+.. |.+ .+.-+..+ +...+++. .++.|.++|..+ .+.++.+......-..|.. ++++
T Consensus 374 ~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~ 453 (567)
T 1qks_A 374 GKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY 453 (567)
T ss_dssp TEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred CcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe
Confidence 998877764 332 33323444 34444443 468999999987 6677887765333233444 8888
Q ss_pred EEEEeC-------CCcEEEEeCCCC
Q psy9182 450 IVSGAY-------DGKIKVWNLVAA 467 (486)
Q Consensus 450 l~s~~~-------dg~v~iwdl~~~ 467 (486)
|.+... .+.|.++|+.+.
T Consensus 454 l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 454 LYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEecCCCCCcccCceEEEEECCcc
Confidence 887663 458999999865
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=1.8e-10 Score=106.10 Aligned_cols=217 Identities=11% Similarity=0.027 Sum_probs=148.2
Q ss_pred EeCCCE-EEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECCCCcEEEEecccC--
Q psy9182 241 QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVNTGEMVNTLIHHC-- 314 (486)
Q Consensus 241 ~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~-- 314 (486)
..++.. +++...++.|.+||..+++.+..+.. ......+++ ++ .++++. .++.|.+||..+++....+....
T Consensus 50 ~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~ 127 (328)
T 3dsm_A 50 VIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMD 127 (328)
T ss_dssp EEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCC
T ss_pred EEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCcc
Confidence 334444 45555578999999999999888863 345666766 55 566555 78999999999998887765433
Q ss_pred ---ccEEEEEEcCCeEEEEe--CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC----------C
Q psy9182 315 ---EAVLHLRFSNGMMVTCS--KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD----------R 377 (486)
Q Consensus 315 ---~~i~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----------~ 377 (486)
.....+++.++.++++. .++.|.++|+.+++....... +. ....+.+ +|++++++..+ +
T Consensus 128 ~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~--g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 128 MESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI--GI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp TTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC--SS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred ccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--CC--CccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 13445566777777776 488999999998765432221 21 2233444 67766666554 7
Q ss_pred cEEEEECCCceEEEEEcCC-cccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEE--ecCcccCeEEEEec--CCEE
Q psy9182 378 TIKVWNTSSCEFVRTLNGH-KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFD--AKRI 450 (486)
Q Consensus 378 ~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~--~~~h~~~v~~~~~~--~~~l 450 (486)
.|.++|..+++....+... ......++++ ++.|.++.. .|.+||..+++.... +..+......++++ +..|
T Consensus 204 ~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~l 281 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEV 281 (328)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCE
T ss_pred eEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeE
Confidence 8999999999988777643 2356677775 778777654 899999988875421 22223567888883 4444
Q ss_pred -EEE----eCCCcEEEEeCC
Q psy9182 451 -VSG----AYDGKIKVWNLV 465 (486)
Q Consensus 451 -~s~----~~dg~v~iwdl~ 465 (486)
++. ..++.|.+||.+
T Consensus 282 yva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 282 YVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEECTTSSSEEEEEEECTT
T ss_pred EEEcccccccCCEEEEECCC
Confidence 444 468899999987
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.41 E-value=8.9e-11 Score=120.29 Aligned_cols=251 Identities=12% Similarity=0.090 Sum_probs=150.3
Q ss_pred cccccCCccCcceEEEeecCc-----eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182 106 DFISLLPNFDEKYIVSASGDR-----TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS 180 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~dg-----~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s 180 (486)
.+....+||||++||.+..++ .|++||+.+++.+.....+. .+..++|+ +|++.|+.++
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~ws---------------pDg~~l~~~~ 189 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWT---------------HDGKGMFYNA 189 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEEC---------------TTSSEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEE---------------eCCCEEEEEE
Confidence 355678899999998765543 89999999988765332222 24556665 3444454444
Q ss_pred CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD 260 (486)
Q Consensus 181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d 260 (486)
.++.-. ... . .. .. ......|++|+
T Consensus 190 ~~~~~~-------~~~-----~------------------------------~~--------~~-----~~~~~~v~~~~ 214 (710)
T 2xdw_A 190 YPQQDG-------KSD-----G------------------------------TE--------TS-----TNLHQKLYYHV 214 (710)
T ss_dssp CCCCSS-------CCS-----S------------------------------SC--------CC-----CCCCCEEEEEE
T ss_pred ECCccc-------ccc-----c------------------------------cc--------cc-----cCCCCEEEEEE
Confidence 332100 000 0 00 00 01234588888
Q ss_pred CCCcee--eEEEc--CCcccEEEEEe--cCCEEEEEeC-----CCcEEEEECCC------Cc-EEEEecccCccEEE-EE
Q psy9182 261 RVSLQC--IKVLT--GHTGSVLCLQY--DERVIISGSS-----DSTVRVWDVNT------GE-MVNTLIHHCEAVLH-LR 321 (486)
Q Consensus 261 ~~~~~~--~~~~~--~~~~~v~~~~~--~~~~l~~~~~-----dg~i~vwd~~~------~~-~~~~~~~~~~~i~~-~~ 321 (486)
+.+++. ...+. .|...+..+.+ |+++|+.++. +..|++||+.+ +. ....+..+...+.. +.
T Consensus 215 l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s 294 (710)
T 2xdw_A 215 LGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVT 294 (710)
T ss_dssp TTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEE
T ss_pred CCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEe
Confidence 877652 22223 24445666666 8888887764 56899999976 43 34455444444433 33
Q ss_pred EcCCeEEEEeCC----CcEEEEECCCCCceeeEEeeecCc--ccEEEEEe--CCCEEEEEeCCCc--EEEEECCCceEEE
Q psy9182 322 FSNGMMVTCSKD----RSIAVWDMVSPNEITLRRVLVGHR--AAVNVVDF--DEKYIVSASGDRT--IKVWNTSSCEFVR 391 (486)
Q Consensus 322 ~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~--~~v~~~~~--~~~~l~~~~~d~~--i~iwd~~~~~~~~ 391 (486)
..++.++..+.. +.|.+||+.++..... ..+..+. ..+..+.+ ++.++++...++. |.+||+.+++.+.
T Consensus 295 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~ 373 (710)
T 2xdw_A 295 NEGTVFTFKTNRHSPNYRLINIDFTDPEESKW-KVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLK 373 (710)
T ss_dssp EETTEEEEEECTTCTTCEEEEEETTSCCGGGC-EEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCCcccc-eeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEE
Confidence 345666655543 3699999987642111 2222332 25666776 3456667777774 6677887788888
Q ss_pred EEcCCcccEEEEEeC--CCEEE-EEe---CCCcEEEEECCCCe
Q psy9182 392 TLNGHKRGIACLQYR--DRLVV-SGS---SDNTIRLWDIECGA 428 (486)
Q Consensus 392 ~~~~~~~~v~~~~~~--~~~l~-~~~---~dg~v~iwd~~~~~ 428 (486)
.+..+...+..+.++ +..++ +.+ ..+.|+.||+.+++
T Consensus 374 ~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 374 IFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 888887778888774 55544 333 35789999998877
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.40 E-value=2.3e-10 Score=103.90 Aligned_cols=219 Identities=10% Similarity=0.031 Sum_probs=147.9
Q ss_pred ceEEEEeCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q psy9182 236 GVYCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 236 ~v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 312 (486)
.-.+++++++ .++++..++.|..||..++ ...+..+...+.++.+ +++++++...++.|.+||..+++.......
T Consensus 31 eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~ 108 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADS 108 (296)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECE
T ss_pred cCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeec
Confidence 4456778888 7888888999999999887 5666667777888888 677777666678999999988876544322
Q ss_pred c----CccEEEEEEcCC--eEEE----Ee-------------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC
Q psy9182 313 H----CEAVLHLRFSNG--MMVT----CS-------------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE 367 (486)
Q Consensus 313 ~----~~~i~~~~~~~~--~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 367 (486)
. ...+..++++++ ++++ |+ ..+.|..++.. ++ . .....+......+.+ ++
T Consensus 109 ~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~---~~~~~~~~~~~gi~~s~dg 183 (296)
T 3e5z_A 109 FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-L---SAPIRDRVKPNGLAFLPSG 183 (296)
T ss_dssp ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-E---EEEECCCSSEEEEEECTTS
T ss_pred cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-E---EEeecCCCCCccEEECCCC
Confidence 1 123456777654 4443 22 13456666654 32 2 222344455566777 78
Q ss_pred CEEEEEeCCCcEEEEECC-CceE---EEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182 368 KYIVSASGDRTIKVWNTS-SCEF---VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441 (486)
Q Consensus 368 ~~l~~~~~d~~i~iwd~~-~~~~---~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~ 441 (486)
+.+++.+.++.|.+||+. +++. ...+..+...+..+.+ +|++.++. ++.|.+||.. ++.+..+..+.. ++
T Consensus 184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~ 259 (296)
T 3e5z_A 184 NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TS 259 (296)
T ss_dssp CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CC
T ss_pred CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ce
Confidence 888777778999999986 4554 3334333444555666 46655555 8899999987 888888887777 89
Q ss_pred EEEe---cCCEEEEEeCCCcEEEEeCCC
Q psy9182 442 CIRF---DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 442 ~~~~---~~~~l~s~~~dg~v~iwdl~~ 466 (486)
+++| +++.|++++.++ +.-++..+
T Consensus 260 ~~~f~~~d~~~L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 260 NLCFGGPEGRTLYMTVSTE-FWSIETNV 286 (296)
T ss_dssp EEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred eEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence 9999 556788888764 44445443
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.39 E-value=3.4e-09 Score=96.02 Aligned_cols=271 Identities=7% Similarity=-0.007 Sum_probs=164.5
Q ss_pred ccccccCCccCcceEEEeecCceeeecccccccceee-ecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD 183 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~-l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg 183 (486)
..+.+++++++|.+.++...++.|.+||.. ++.... +..+...+..++++ +++..+++...++
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~---------------~~g~l~v~~~~~~ 78 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTIS---------------SDGEVWFTENAAN 78 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEEC---------------TTSCEEEEETTTT
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEEC---------------CCCCEEEeCCCCC
Confidence 456778888999888777668899999988 554322 22344567777775 3444555555567
Q ss_pred cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEec-cCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182 184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINC-RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262 (486)
Q Consensus 184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~ 262 (486)
.|..||... .. ..+.. ........+++.+++.++++...++.|.+||.
T Consensus 79 ~i~~~~~~g-~~-----------------------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~- 127 (299)
T 2z2n_A 79 KIGRITKKG-II-----------------------------KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD- 127 (299)
T ss_dssp EEEEECTTS-CE-----------------------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred eEEEECCCC-cE-----------------------------EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-
Confidence 787887531 10 00000 01112223444556777777667889999998
Q ss_pred CceeeEE-EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE-ecccCccEEEEEEcC-CeEEEEe-CCCcE
Q psy9182 263 SLQCIKV-LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT-LIHHCEAVLHLRFSN-GMMVTCS-KDRSI 336 (486)
Q Consensus 263 ~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~i~~~~~~~-~~l~~~~-~dg~i 336 (486)
+++.... ...+...+.++.+ +++..++...++.|..||. +++.... .......+..+++++ +.++++. .++.|
T Consensus 128 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 206 (299)
T 2z2n_A 128 DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKI 206 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceE
Confidence 5544432 2334456778877 4666666666789999999 6765543 333345678888875 3455544 57889
Q ss_pred EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE-EcCCcccEEEEEeCCCEEEEE
Q psy9182 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYRDRLVVSG 413 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~ 413 (486)
..||. +++... .........+..+.+ +|+..++...++.|..||. +++.... +..+...+.++.+.+..+..+
T Consensus 207 ~~~~~-~g~~~~--~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~g~l~v~ 282 (299)
T 2z2n_A 207 GRITT-SGEITE--FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICFDGETIWFA 282 (299)
T ss_dssp EEECT-TCCEEE--EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEECSSCEEEE
T ss_pred EEECC-CCcEEE--EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEecCCCEEEE
Confidence 99998 554321 122334456777877 5665555556789999998 4543222 234445566666543334444
Q ss_pred eCCCcEEEEECCCC
Q psy9182 414 SSDNTIRLWDIECG 427 (486)
Q Consensus 414 ~~dg~v~iwd~~~~ 427 (486)
...+.|..++.+++
T Consensus 283 ~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 283 MECDKIGKLTLIKD 296 (299)
T ss_dssp ETTTEEEEEEEC--
T ss_pred ecCCcEEEEEcCcc
Confidence 44677777777654
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=9.7e-11 Score=104.70 Aligned_cols=228 Identities=7% Similarity=-0.071 Sum_probs=144.6
Q ss_pred eEEEEeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182 237 VYCLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH 313 (486)
Q Consensus 237 v~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 313 (486)
-+++.++++.++ +...++.|.+||..+.........+...+.++++ +++++++.. ++.|.+||.............
T Consensus 28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~ 106 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDG 106 (270)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCS
T ss_pred ceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCC
Confidence 345566787666 4467889999997665433222223345666777 566555544 889999998765443222223
Q ss_pred CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE
Q psy9182 314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF 389 (486)
Q Consensus 314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~ 389 (486)
...+..++++++ .+++...++.|.+|+..+..... ........+..+.+ +++++++...++.|.+||......
T Consensus 107 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 107 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV---LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE---CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe---eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 356788888743 44444567899999765543221 11122234455665 677666666778999999887665
Q ss_pred EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 390 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 390 ~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
......+...+..+.++ +.++++...++.|.+||............+...+.++++ +|+.+++...++.|+++++.
T Consensus 184 ~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 184 VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 44333343567778875 566666667889999998765443322233456889999 67778888889999999987
Q ss_pred CCC
Q psy9182 466 AAL 468 (486)
Q Consensus 466 ~~~ 468 (486)
...
T Consensus 264 ~~~ 266 (270)
T 1rwi_B 264 EHH 266 (270)
T ss_dssp GGG
T ss_pred Ccc
Confidence 543
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.38 E-value=7e-09 Score=93.92 Aligned_cols=221 Identities=10% Similarity=-0.022 Sum_probs=140.0
Q ss_pred EEEEeCCCEEEEEecCCeEEEEECCCceee-EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE-eccc
Q psy9182 238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCI-KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT-LIHH 313 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~ 313 (486)
+++.+++..+++...++.|..||.. ++.. ..+......+.++.+ ++.++++...++.|..||. +++.... ....
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred EEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 4455677777776668899999976 3322 122224456778887 4666666667789999998 5654432 2333
Q ss_pred CccEEEEEEcCC-eEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE
Q psy9182 314 CEAVLHLRFSNG-MMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF 389 (486)
Q Consensus 314 ~~~i~~~~~~~~-~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~ 389 (486)
...+..+++.++ .++++ ..++.|..||. +++... .........+..+.+ ++++.++...++.|.+||. +++.
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE--FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI 215 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE--eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE
Confidence 456788888753 45544 45689999998 554321 112233445667777 5676666656789999999 6664
Q ss_pred EEE-EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEe-cCCEEEEEeCCCcEEEEeC
Q psy9182 390 VRT-LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 390 ~~~-~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl 464 (486)
... ...+...+..+.++ +++.++...++.|..||. +++.... +..+...+.++++ +++..+ +...+.|..++.
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~g~l~v-~~~~~~l~~~~~ 293 (299)
T 2z2n_A 216 TEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICFDGETIWF-AMECDKIGKLTL 293 (299)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEECSSCEEE-EETTTEEEEEEE
T ss_pred EEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEecCCCEEE-EecCCcEEEEEc
Confidence 332 23345667788875 565555557889999998 4553322 3344567888888 444444 444667777776
Q ss_pred CC
Q psy9182 465 VA 466 (486)
Q Consensus 465 ~~ 466 (486)
.+
T Consensus 294 ~~ 295 (299)
T 2z2n_A 294 IK 295 (299)
T ss_dssp C-
T ss_pred Cc
Confidence 64
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.38 E-value=1.7e-10 Score=107.20 Aligned_cols=258 Identities=11% Similarity=0.127 Sum_probs=148.5
Q ss_pred ccccccCCccCcceEEEeecC---c--eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182 105 RDFISLLPNFDEKYIVSASGD---R--TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS 179 (486)
Q Consensus 105 ~~~~~~~~s~~~~~l~tg~~d---g--~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~ 179 (486)
..+....++|||++|+..+.+ + .|.+||+.+++.......+. +..++|+ +|++.|+.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~ws---------------pdg~~l~~~ 121 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWN---------------EDSRKLLIV 121 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEEC---------------TTSSEEEEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeEC---------------CCCCEEEEE
Confidence 346677899999999987654 2 48888888877655444333 8888886 455555554
Q ss_pred CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182 180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW 259 (486)
Q Consensus 180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~ 259 (486)
+.+.. . .... ..... ..+..++..+. ......|.+|
T Consensus 122 ~~~~~-------~-~~~~------------------------~~~~~-----------~~~~~~g~~~~-~~~~~~l~~~ 157 (347)
T 2gop_A 122 GFKRR-------E-DEDF------------------------IFEDD-----------VPAWFDDLGFF-DGEKTTFWIF 157 (347)
T ss_dssp EECCC-------C---------------------------------------------CCCC----------CEEEEEEE
T ss_pred EccCC-------C-cCCc------------------------EEEcc-----------cceeecCcccc-cCccceEEEE
Confidence 43210 0 0000 00000 00001111111 1224578999
Q ss_pred ECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC-------cEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEE
Q psy9182 260 DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS-------TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTC 330 (486)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~ 330 (486)
|+.+++.+..+.. . .+..+.| ++ +++++..++ ...+|.+.+++. ..+..+ ..+..+..++..++.+
T Consensus 158 d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~spdg~~l~~~ 232 (347)
T 2gop_A 158 DTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAVDSDGERILLY 232 (347)
T ss_dssp ETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEEEECSSCEEEE
T ss_pred ECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeECCCCCEEEEE
Confidence 9998887444443 3 5666666 66 777765542 334444335544 334333 4555554445567666
Q ss_pred eCC--------CcEEEEECCCCCceeeEEeeecCcccEEE-EEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccE
Q psy9182 331 SKD--------RSIAVWDMVSPNEITLRRVLVGHRAAVNV-VDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400 (486)
Q Consensus 331 ~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v 400 (486)
+.+ ..|.+|| +++. ......+...+.. +.| ++ ++++++.++.+++| +.+++... +..+...+
T Consensus 233 ~~~~~~~~~~~~~l~~~d--~~~~---~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v 304 (347)
T 2gop_A 233 GKPEKKYMSEHNKLYIYD--GKEV---MGILDEVDRGVGQAKIKDGK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWI 304 (347)
T ss_dssp ECCSSSCCCSSCEEEEEC--SSCE---EESSTTCCSEEEEEEEETTE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEE
T ss_pred EccccCCccccceEEEEC--CCce---EeccccCCcccCCccEEcCc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeE
Confidence 643 3688888 4332 2333445566665 667 55 88888999999999 87666543 44457778
Q ss_pred EEEEeCCCEEEEEeCCCcE-EEEECCCCeeeEEecCccc
Q psy9182 401 ACLQYRDRLVVSGSSDNTI-RLWDIECGACLRVLEGHEE 438 (486)
Q Consensus 401 ~~~~~~~~~l~~~~~dg~v-~iwd~~~~~~~~~~~~h~~ 438 (486)
.++.+++.++++++.++.. .+|.+. ++ ...+..|..
T Consensus 305 ~~~~~s~~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 305 MGFDVDEIVVYLKETATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp EEEEESSSEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred EeeeeeCcEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence 8888866667777777765 777776 54 445665554
No 197
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.35 E-value=8.2e-11 Score=111.26 Aligned_cols=225 Identities=13% Similarity=0.082 Sum_probs=144.8
Q ss_pred EEEeCCCEEEEEec-CC--eEEEEECCCceeeEEEcCCcccEE--EEEecCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182 239 CLQYDDHKIVSGLR-DN--TIKVWDRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHH 313 (486)
Q Consensus 239 ~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 313 (486)
+++|||++|+.++. +| .|.+||+.+++......++...+. .++.|++.|+.++.++.|++||+.+++.......+
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech
Confidence 57899999998887 66 488999999988877776665543 44558999999999999999999999877666655
Q ss_pred CccEEEEEE--cCC--eEEEE----------------------eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--
Q psy9182 314 CEAVLHLRF--SNG--MMVTC----------------------SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-- 365 (486)
Q Consensus 314 ~~~i~~~~~--~~~--~l~~~----------------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-- 365 (486)
...+....+ +++ .++.. ..+..|.+||+.+++.... ..+...+..+.|
T Consensus 122 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l----~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 122 AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI----LQENQWLGHPIYRP 197 (388)
T ss_dssp TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE----EEESSCEEEEEEET
T ss_pred hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe----ecCCccccccEECC
Confidence 554543333 433 44321 2346899999988764322 223344554444
Q ss_pred -CCCEEEEEeCC------CcEEEEECCCceEEEEEcCCc--ccEEEEEe--CCCEEEEEeC-CC----cEEEEECCCCee
Q psy9182 366 -DEKYIVSASGD------RTIKVWNTSSCEFVRTLNGHK--RGIACLQY--RDRLVVSGSS-DN----TIRLWDIECGAC 429 (486)
Q Consensus 366 -~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~--~~v~~~~~--~~~~l~~~~~-dg----~v~iwd~~~~~~ 429 (486)
+++.|+....+ ..|.++|...++. ..+..+. ..+....| +|+.|+..+. ++ .|++||+.+++.
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 67778777653 3788888876543 4444443 24555566 5776655443 22 399999998874
Q ss_pred e--EEecCcccC---e--EEEEecCCEEEEE---------eCCCcEEEEeCCCCC
Q psy9182 430 L--RVLEGHEEL---V--RCIRFDAKRIVSG---------AYDGKIKVWNLVAAL 468 (486)
Q Consensus 430 ~--~~~~~h~~~---v--~~~~~~~~~l~s~---------~~dg~v~iwdl~~~~ 468 (486)
. ..+.++... . ..+..||+.|+.. ..+..|++||+.++.
T Consensus 277 ~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 277 RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 3 333331111 0 1234488877753 456789999998753
No 198
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.34 E-value=6.8e-10 Score=112.24 Aligned_cols=225 Identities=13% Similarity=0.083 Sum_probs=152.3
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCC-c----ccEE-EEEecCCEEEEEeC------CCcEEEEECCCCcEEEEe
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH-T----GSVL-CLQYDERVIISGSS------DSTVRVWDVNTGEMVNTL 310 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~----~~v~-~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~ 310 (486)
++..+++++.|+.|..+|..+|+.+..+..+ . ..+. .....+..+++++. +|.|+.+|.++|+.+..+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 4567888889999999999999999888754 1 1121 11224556666654 689999999999998877
Q ss_pred cccCcc--------------------------------EEEEEEc--CCeEEEEeCCC-------------------cEE
Q psy9182 311 IHHCEA--------------------------------VLHLRFS--NGMMVTCSKDR-------------------SIA 337 (486)
Q Consensus 311 ~~~~~~--------------------------------i~~~~~~--~~~l~~~~~dg-------------------~i~ 337 (486)
...... ...++++ .+.+++++.++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 532111 0234554 45788777664 499
Q ss_pred EEECCCCCceeeEEeeecC--------c-ccEEEEEeCC---CEEEEEeCCCcEEEEECCCceEEEEEcCCccc------
Q psy9182 338 VWDMVSPNEITLRRVLVGH--------R-AAVNVVDFDE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG------ 399 (486)
Q Consensus 338 i~d~~~~~~~~~~~~~~~~--------~-~~v~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------ 399 (486)
.+|..+++..-..+. ..| . ..+.....+| ..++.++.+|.++++|..+|+.+..+......
T Consensus 287 AlD~~TG~~~W~~~~-~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d 365 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQE-TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (677)
T ss_dssp EECTTTCCEEEEEES-STTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEECCCCCEEEEEec-CCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence 999999886543332 112 1 1222233367 68899999999999999999998776522100
Q ss_pred -------------------------------EEEEEeCCCEEEEEeC---------------------------------
Q psy9182 400 -------------------------------IACLQYRDRLVVSGSS--------------------------------- 415 (486)
Q Consensus 400 -------------------------------v~~~~~~~~~l~~~~~--------------------------------- 415 (486)
-.++..+..++++...
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 445 (677)
T 1kb0_A 366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF 445 (677)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccc
Confidence 0122334566666533
Q ss_pred ----------CCcEEEEECCCCeeeEEecCcccCeEE--EEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 416 ----------DNTIRLWDIECGACLRVLEGHEELVRC--IRFDAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 416 ----------dg~v~iwd~~~~~~~~~~~~h~~~v~~--~~~~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
.|.|..||+.+|+.+..+... .++.. +..++..++.++.||.+++||+.++..
T Consensus 446 ~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 446 FNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp ECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 278999999999999887633 33332 344888999999999999999998753
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.34 E-value=8.2e-10 Score=113.63 Aligned_cols=227 Identities=13% Similarity=0.072 Sum_probs=144.2
Q ss_pred EEEEeCCCEEEEEecC-----CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCc--------------E
Q psy9182 238 YCLQYDDHKIVSGLRD-----NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDST--------------V 296 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~--------------i 296 (486)
.+++|||++|+.+..+ ..|++||+.+++.+.... +...+..++| | +.|+.+..++. |
T Consensus 168 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 168 WAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp EEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEE
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEE
Confidence 4567888888876654 369999999988765321 1111234566 7 88888776654 8
Q ss_pred EEEECCCCcE--EEEe--cccCccEEEEEEcCC--eEEEEeCC-----CcEEEEECCCC--CceeeEEeeecCcccEEEE
Q psy9182 297 RVWDVNTGEM--VNTL--IHHCEAVLHLRFSNG--MMVTCSKD-----RSIAVWDMVSP--NEITLRRVLVGHRAAVNVV 363 (486)
Q Consensus 297 ~vwd~~~~~~--~~~~--~~~~~~i~~~~~~~~--~l~~~~~d-----g~i~i~d~~~~--~~~~~~~~~~~~~~~v~~~ 363 (486)
++|++.++.. ...+ ..+...+..+.++++ .++..+.+ ..|++||+.++ +... ............+
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~--~l~~~~~~~~~~~ 323 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT--ALIPDLKAQWDFV 323 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE--EEECSSSSCEEEE
T ss_pred EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE--EecCCCCceEEEE
Confidence 9999987752 2222 223335788888865 56655543 48999999876 3011 1222222233334
Q ss_pred EeCCCEEEEEeCC----CcEEEEECCCc--eEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECC-CCeeeEEecC
Q psy9182 364 DFDEKYIVSASGD----RTIKVWNTSSC--EFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE-CGACLRVLEG 435 (486)
Q Consensus 364 ~~~~~~l~~~~~d----~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~ 435 (486)
..+++.|+..+.+ +.|.+||+.++ +....+..+...+..+.+. +.++++...|+..+||.+. +++....+..
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~ 403 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSL 403 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBC
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccC
Confidence 4588888877753 45999999874 3444445555556666665 5667788889887777554 4666666664
Q ss_pred -cccCeEEEEe--cCCEEE-EEe---CCCcEEEEeCCCCC
Q psy9182 436 -HEELVRCIRF--DAKRIV-SGA---YDGKIKVWNLVAAL 468 (486)
Q Consensus 436 -h~~~v~~~~~--~~~~l~-s~~---~dg~v~iwdl~~~~ 468 (486)
+...+..+.+ +++.|+ +.+ ..++|++||+.++.
T Consensus 404 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 404 PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 3566788887 566554 322 35789999997653
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.34 E-value=6.9e-09 Score=97.00 Aligned_cols=230 Identities=10% Similarity=-0.043 Sum_probs=148.1
Q ss_pred eEEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCC-------cccE--EEEEecCCEEEEEeC--CCc
Q psy9182 237 VYCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGH-------TGSV--LCLQYDERVIISGSS--DST 295 (486)
Q Consensus 237 v~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~-------~~~v--~~~~~~~~~l~~~~~--dg~ 295 (486)
-+.+++|++.++++. .++.|.+||..+++.+..+... .... ..++.|+++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 677899999998886 3678999999998888776432 0112 334458999998874 478
Q ss_pred EEEEECCCCcEEEE-ecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEe--eecCcccE-EEE--EeCCCE
Q psy9182 296 VRVWDVNTGEMVNT-LIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV--LVGHRAAV-NVV--DFDEKY 369 (486)
Q Consensus 296 i~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~v-~~~--~~~~~~ 369 (486)
|.++| .+++.+.. +... ..+......+..+++.+.||.+.++|. +++....... .......+ ... ..++..
T Consensus 150 v~viD-~t~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 226 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR 226 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCE
Confidence 99999 99998877 6442 222222223446677788999999999 7664422110 00111111 111 223444
Q ss_pred EEEEeCCCcEEEEECCCce--EEEEEcCC----------cccE--EEEEeCCCEEEEEeC----------CCcEEEEECC
Q psy9182 370 IVSASGDRTIKVWNTSSCE--FVRTLNGH----------KRGI--ACLQYRDRLVVSGSS----------DNTIRLWDIE 425 (486)
Q Consensus 370 l~~~~~d~~i~iwd~~~~~--~~~~~~~~----------~~~v--~~~~~~~~~l~~~~~----------dg~v~iwd~~ 425 (486)
++..+..+.+.+.|+.+.. .+..+... .... ..+..+++.+.++.. ++.|.++|+.
T Consensus 227 ~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~ 306 (373)
T 2mad_H 227 IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL 306 (373)
T ss_pred EEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC
Confidence 3333467899999987542 22333211 1111 234445676666543 3579999999
Q ss_pred CCeeeEEecCcccCeEEEEe--cCC-EEEEEe-CCCcEEEEeCCCCCCC
Q psy9182 426 CGACLRVLEGHEELVRCIRF--DAK-RIVSGA-YDGKIKVWNLVAALDP 470 (486)
Q Consensus 426 ~~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~-~dg~v~iwdl~~~~~~ 470 (486)
+++.+..+... .....++| ||+ +++++. .++.|.+||+.+....
T Consensus 307 t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 307 VGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 99999888543 35778888 888 777777 5899999999876543
No 201
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.33 E-value=3.6e-09 Score=107.22 Aligned_cols=304 Identities=9% Similarity=0.058 Sum_probs=181.8
Q ss_pred CcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194 (486)
Q Consensus 115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~ 194 (486)
.+..|+.++.++.|..+|..+|+.+..+..+........... ......+.+ ++..++.++.|+.|..+|..+++
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~g~v~v~~~dg~l~AlDa~TG~ 142 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACC-----DAVNRGVAV-WKGKVYVGVLDGRLEAIDAKTGQ 142 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTT-----CSCCCCCEE-ETTEEEEECTTSEEEEEETTTCC
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccc-----cCCCCccEE-ECCEEEEEccCCEEEEEECCCCC
Confidence 456778888899999999999999988765432110000000 000001111 23456666778888888876665
Q ss_pred ccccCCCC-CCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe------cCCeEEEEECCCceee
Q psy9182 195 ETPIQGGG-GGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL------RDNTIKVWDRVSLQCI 267 (486)
Q Consensus 195 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~ 267 (486)
........ .... . .......++ .+..++++. .+|.|+.||..+|+.+
T Consensus 143 ~~W~~~~~~~~~~---------~-------------~~~~~sP~v----~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 143 RAWSVDTRADHKR---------S-------------YTITGAPRV----VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp EEEEEECCSCTTS---------C-------------CBCCSCCEE----ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EeeeecCcCCCCC---------C-------------ccccCCcEE----ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 44322111 0000 0 000001111 234455544 3689999999999998
Q ss_pred EEEcCCc---c---------------------------cE-EEEEe--cCCEEEEEeCCCc-------------------
Q psy9182 268 KVLTGHT---G---------------------------SV-LCLQY--DERVIISGSSDST------------------- 295 (486)
Q Consensus 268 ~~~~~~~---~---------------------------~v-~~~~~--~~~~l~~~~~dg~------------------- 295 (486)
..+.... . .+ ..+++ +...++.++.++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 8775210 0 00 12344 5678888887763
Q ss_pred EEEEECCCCcEEEEeccc--C-------ccE--EEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeee-------
Q psy9182 296 VRVWDVNTGEMVNTLIHH--C-------EAV--LHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLV------- 354 (486)
Q Consensus 296 i~vwd~~~~~~~~~~~~~--~-------~~i--~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------- 354 (486)
|..+|.++|+.+..++.. . ... ..+.+.+. .++.++.+|.++++|..+++.+.......
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 999999999999887542 1 111 22333332 68889999999999999988653211100
Q ss_pred ------------------cCc-------------ccEEEEEeCCCEEEEEeC----------------------------
Q psy9182 355 ------------------GHR-------------AAVNVVDFDEKYIVSASG---------------------------- 375 (486)
Q Consensus 355 ------------------~~~-------------~~v~~~~~~~~~l~~~~~---------------------------- 375 (486)
... -.-.+++.+..++++...
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 000 000123334455555421
Q ss_pred -----------------CCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc
Q psy9182 376 -----------------DRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 437 (486)
Q Consensus 376 -----------------d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~ 437 (486)
+|.|..||+.+++.+.+++.+.... ..+...+.+++.|+.||.|+.||.++|+.+..++...
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 3779999999999988887554322 2455578899999999999999999999999887543
Q ss_pred cCe-EEEEe--cCCEE
Q psy9182 438 ELV-RCIRF--DAKRI 450 (486)
Q Consensus 438 ~~v-~~~~~--~~~~l 450 (486)
..+ .-+.| +|+..
T Consensus 517 ~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQY 532 (689)
T ss_dssp CCCSCCEEEEETTEEE
T ss_pred CcccCceEEEECCEEE
Confidence 321 23444 77653
No 202
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.33 E-value=4.2e-10 Score=102.12 Aligned_cols=232 Identities=11% Similarity=0.038 Sum_probs=149.2
Q ss_pred ccccCCccCcc-eEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182 107 FISLLPNFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI 185 (486)
Q Consensus 107 ~~~~~~s~~~~-~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i 185 (486)
.-+++++|+++ +++++..++.|..||..++ ...+..+...+.+++++ +++..+++...++.|
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~---------------~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLN---------------KQGHLIACSHGLRRL 92 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEEC---------------TTCCEEEEETTTTEE
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeEC---------------CCCcEEEEecCCCeE
Confidence 34678889998 7888888999999999877 66777777778888886 456666666667889
Q ss_pred eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEE----Ee----------
Q psy9182 186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS----GL---------- 251 (486)
Q Consensus 186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~----~~---------- 251 (486)
.+||..++....... ...........-+++.++|+++++ |+
T Consensus 93 ~~~d~~~g~~~~~~~-------------------------~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 93 ERQREPGGEWESIAD-------------------------SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp EEECSTTCCEEEEEC-------------------------EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred EEEcCCCCcEEEEee-------------------------ccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence 999874433211100 000000112234567788888776 33
Q ss_pred ---cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECC-CCcE---EEEecccCccEEEEEE
Q psy9182 252 ---RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVN-TGEM---VNTLIHHCEAVLHLRF 322 (486)
Q Consensus 252 ---~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~-~~~~---~~~~~~~~~~i~~~~~ 322 (486)
..+.|..++.. ++. ..+..+......+++ +++.+++.+.++.|.+||+. +++. ...+..+...+..+++
T Consensus 148 ~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~ 225 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRV 225 (296)
T ss_dssp CCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEE
T ss_pred ccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEE
Confidence 13467777655 443 334445556677777 68888777778999999987 5554 2333233444567788
Q ss_pred cC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceE
Q psy9182 323 SN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEF 389 (486)
Q Consensus 323 ~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~ 389 (486)
++ +.++++. ++.|.+||.. ++.. ..+..+.. +.++.| +++.|++++.+ .+.-++..+.+.
T Consensus 226 d~~G~l~v~~-~~~v~~~~~~-g~~~---~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 226 DAGGLIWASA-GDGVHVLTPD-GDEL---GRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp BTTSCEEEEE-TTEEEEECTT-SCEE---EEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred CCCCCEEEEc-CCeEEEECCC-CCEE---EEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 64 3566666 8899999986 4433 23333444 667776 56788888775 466667766554
No 203
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.32 E-value=1.6e-14 Score=135.54 Aligned_cols=210 Identities=12% Similarity=0.049 Sum_probs=104.3
Q ss_pred EEEEEecCCeEEEEECCCceeeEEEcCCccc-E-EEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEE
Q psy9182 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-V-LCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322 (486)
Q Consensus 246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v-~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~ 322 (486)
.+++++.||.|+.||..+++.+..+..+... + .+... ++..+++++.++.|+.||.++|+.+..+..+.. + ..+.
T Consensus 51 ~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~-~~~p 128 (369)
T 2hz6_A 51 AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-D-SLSP 128 (369)
T ss_dssp CEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------
T ss_pred EEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-c-cccc
Confidence 3444556666666666666655554432111 1 01111 345677777888899999888888777654431 1 1122
Q ss_pred cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC-----CEEEEEeCCCcEEEEECCCceEEEEEcCCc
Q psy9182 323 SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-----KYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397 (486)
Q Consensus 323 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 397 (486)
.++.+++++.++.|+.||.++++........ . .....+++ ..+++++.+|.|+.||.++++.+..+....
T Consensus 129 ~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 203 (369)
T 2hz6_A 129 STSLLYLGRTEYTITMYDTKTRELRWNATYF-D----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS 203 (369)
T ss_dssp ----EEEEEEEEEEECCCSSSSSCCCEEEEE-E----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS
T ss_pred cCCEEEEEecCCEEEEEECCCCCEEEeEecc-c----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 4568888888899999999887754322211 1 11112222 567778899999999999999888776433
Q ss_pred ccEEEEEeC--CCEE----EEEeCCCcEEEEECCCCe----eeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182 398 RGIACLQYR--DRLV----VSGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 398 ~~v~~~~~~--~~~l----~~~~~dg~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~ 465 (486)
..+...... +... +.+ ++.++.+|..+|+ .+..+... ..+.+....+..|+.++.||.|+.++..
T Consensus 204 pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ld~~tG~~~~~~~W~~~~~-~~~~sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 204 PVVAFYVWQREGLRKVMHINVA--VETLRYLTFMSGEVGRITKWKYPFP-KETEAKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp CEEEEEECTTSSCEEECCEEEE--HHHHHHHHHHHHHHHHHHTSCCCCC-CHHHHHHHSEEEECBEECSSCEECCEEE
T ss_pred ceEEEEEecCCceEeccceeec--ccceeeeehhcCCcccceeeeeccC-ccccccccccceEEEecccCCEEecCcc
Confidence 322323332 2211 111 3445666666665 44333211 1111111245678888889999988876
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.32 E-value=2.1e-10 Score=102.53 Aligned_cols=235 Identities=9% Similarity=-0.038 Sum_probs=143.8
Q ss_pred cccccCCccCcceEE-EeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182 106 DFISLLPNFDEKYIV-SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT 184 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~-tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~ 184 (486)
....++++++|++++ +...++.|.+||..++........+...+.+++++ +++..+++.. ++.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~---------------~~g~l~v~~~-~~~ 88 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVD---------------GAGTVYVTDF-NNR 88 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEEC---------------TTCCEEEEET-TTE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEEC---------------CCCCEEEEcC-CCE
Confidence 455677888998777 55778999999987655332222333456667775 3444455544 778
Q ss_pred ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc
Q psy9182 185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL 264 (486)
Q Consensus 185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~ 264 (486)
|.+||.......... ........-+++.+++..+++...++.|.+|+..+.
T Consensus 89 i~~~d~~~~~~~~~~-----------------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 89 VVTLAAGSNNQTVLP-----------------------------FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK 139 (270)
T ss_dssp EEEECTTCSCCEECC-----------------------------CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC
T ss_pred EEEEeCCCceEeeee-----------------------------cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc
Confidence 888886432211100 000112223455667887777777889999986655
Q ss_pred eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC-eEEEE-eCCCcEEEEE
Q psy9182 265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-MMVTC-SKDRSIAVWD 340 (486)
Q Consensus 265 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~-~~dg~i~i~d 340 (486)
............+.++.+ +++++++...++.|.+||................+..++++++ .++++ ..++.|.+||
T Consensus 140 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 140 TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence 433322222234556666 5776666666789999998876654433333366788898754 55544 4578999999
Q ss_pred CCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce
Q psy9182 341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE 388 (486)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~ 388 (486)
....... .....+...+..+.+ +|+++++...++.|++++....+
T Consensus 220 ~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 220 AGSTTST---VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp TTCSCCE---ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCCcce---eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 8664432 111223345677777 67778888889999999987654
No 205
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.30 E-value=1.1e-10 Score=119.31 Aligned_cols=225 Identities=10% Similarity=0.019 Sum_probs=144.0
Q ss_pred eEEEEeCCCEEEE-----EecCCeEEEEECCCceeeEEEcCCcccE--EEEEe--cCCEEEEEeCCCc------------
Q psy9182 237 VYCLQYDDHKIVS-----GLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQY--DERVIISGSSDST------------ 295 (486)
Q Consensus 237 v~~~~~~~~~l~~-----~~~dg~i~i~d~~~~~~~~~~~~~~~~v--~~~~~--~~~~l~~~~~dg~------------ 295 (486)
...++|||++|+. |+.+..|++||+.+++.+. ..+...+ ..++| |++.|+.++.|..
T Consensus 125 ~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 125 TWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 4567889999884 3445689999999988651 1111122 45556 8899999888776
Q ss_pred -EEEEECCCCc----EEEEecccCccEEEEEEcCC--eEEEEeCCC----cEEEEECCCCCceeeEEeeecCcccEEEEE
Q psy9182 296 -VRVWDVNTGE----MVNTLIHHCEAVLHLRFSNG--MMVTCSKDR----SIAVWDMVSPNEITLRRVLVGHRAAVNVVD 364 (486)
Q Consensus 296 -i~vwd~~~~~----~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~ 364 (486)
|++|++.+++ ++.....+...+..+.++++ .++.++.++ .|.++|..+++... +..+...+....
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~----l~~~~~~~~~~~ 278 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRL----LVKGVGAKYEVH 278 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEE----EEECSSCCEEEE
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEE----eecCCCceEEEE
Confidence 9999998876 33333344567888889865 566665554 67777655443221 222222333333
Q ss_pred -eCCCEEEEEeC----CCcEEEEECCCceE---EEEEcCC-cccEEEEEeC-CCEEEEEeCCCcEEEEECC-CCeeeEEe
Q psy9182 365 -FDEKYIVSASG----DRTIKVWNTSSCEF---VRTLNGH-KRGIACLQYR-DRLVVSGSSDNTIRLWDIE-CGACLRVL 433 (486)
Q Consensus 365 -~~~~~l~~~~~----d~~i~iwd~~~~~~---~~~~~~~-~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~-~~~~~~~~ 433 (486)
.++. ++..+. ++.|.+||+.+++. ...+..+ ...+..+.+. +.++++...|+..++|.+. +++....+
T Consensus 279 ~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 279 AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 4666 544443 57899999987653 3333333 3456666664 6677888889988888664 46666666
Q ss_pred cCc-ccCeEEEEe--cCCEEEEE----eCCCcEEEEeCCCCC
Q psy9182 434 EGH-EELVRCIRF--DAKRIVSG----AYDGKIKVWNLVAAL 468 (486)
Q Consensus 434 ~~h-~~~v~~~~~--~~~~l~s~----~~dg~v~iwdl~~~~ 468 (486)
..+ ...+..+++ +++.++.. ...++|++||+.++.
T Consensus 358 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 358 QLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp CCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 655 556677777 66666532 235789999998753
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.29 E-value=3.1e-09 Score=99.97 Aligned_cols=275 Identities=16% Similarity=0.097 Sum_probs=179.5
Q ss_pred CCccCcceEEEeecC-----ceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC-----
Q psy9182 111 LPNFDEKYIVSASGD-----RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS----- 180 (486)
Q Consensus 111 ~~s~~~~~l~tg~~d-----g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s----- 180 (486)
++.+++++++..... +.|.+.|..+++.+.++..-..+ .++++ +|++.++.+.
T Consensus 79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~S---------------pDgk~lyVan~~~~~ 141 (426)
T 3c75_H 79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAA---------------EDGSFFAQASTVFER 141 (426)
T ss_dssp CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEEC---------------TTSSCEEEEEEEEEE
T ss_pred cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEEC---------------CCCCEEEEEeccccc
Confidence 566788776665542 79999999999999988754444 67776 5666666554
Q ss_pred -----CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc------CCCccceEEEEeCCCEEEE
Q psy9182 181 -----HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR------SENSKGVYCLQYDDHKIVS 249 (486)
Q Consensus 181 -----~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~l~~ 249 (486)
.++.|.++|..+.+... .+... ......-+.+++|++++++
T Consensus 142 ~~~G~~~~~VsviD~~t~~vv~----------------------------~I~v~g~~r~~~g~~P~~~~~spDGk~lyV 193 (426)
T 3c75_H 142 IARGKRTDYVEVFDPVTFLPIA----------------------------DIELPDAPRFLVGTYQWMNALTPDNKNLLF 193 (426)
T ss_dssp TTEEEEEEEEEEECTTTCCEEE----------------------------EEEETTCCCCCBSCCGGGSEECTTSSEEEE
T ss_pred cccCCCCCEEEEEECCCCcEEE----------------------------EEECCCccccccCCCcceEEEcCCCCEEEE
Confidence 46789999986644322 11110 0122344678899999998
Q ss_pred Eec--CCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe----cccCccE-EEEE
Q psy9182 250 GLR--DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL----IHHCEAV-LHLR 321 (486)
Q Consensus 250 ~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~----~~~~~~i-~~~~ 321 (486)
+.. ++.|.+.|+.+++.+..+..... ..+.. ....+++.+.||.+.+.+..+++..... .....++ ..+.
T Consensus 194 ~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~ 271 (426)
T 3c75_H 194 YQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPA 271 (426)
T ss_dssp EECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCE
T ss_pred EecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEee
Confidence 874 57899999999999988874322 22333 3467777888999999998666655321 1111111 1223
Q ss_pred Ec--CCeEEEEeCCCcEEEEECCCCCceeeE--Eee---------ecCcccEEEEEeCCCEEEEEeC----------CCc
Q psy9182 322 FS--NGMMVTCSKDRSIAVWDMVSPNEITLR--RVL---------VGHRAAVNVVDFDEKYIVSASG----------DRT 378 (486)
Q Consensus 322 ~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~---------~~~~~~v~~~~~~~~~l~~~~~----------d~~ 378 (486)
+. ++.++.....+.|.+.|+......... ... .........+..+++.+++... ++.
T Consensus 272 ~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~ 351 (426)
T 3c75_H 272 FSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF 351 (426)
T ss_dssp ECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE
T ss_pred ecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE
Confidence 33 346666677889999998654321110 000 0111112356667777766642 357
Q ss_pred EEEEECCCceEEEEEcCCcccEEEEE--eCCC-EEEEEe-CCCcEEEEECCCCeeeEEe
Q psy9182 379 IKVWNTSSCEFVRTLNGHKRGIACLQ--YRDR-LVVSGS-SDNTIRLWDIECGACLRVL 433 (486)
Q Consensus 379 i~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~ 433 (486)
|.+.|..+.+.+.++.... ....+. .+++ ++++.. .++.|.++|+.+++.+..+
T Consensus 352 VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 352 VVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999999999999887433 233444 4677 888887 5999999999999999887
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.27 E-value=5.8e-10 Score=114.78 Aligned_cols=179 Identities=18% Similarity=0.094 Sum_probs=108.1
Q ss_pred CeEEEEECCCcee--eEEEc--CCcccEEEEEe--cCCEEEEEeCCC-----cEEEEECCCC--cEEEEecccCccEE-E
Q psy9182 254 NTIKVWDRVSLQC--IKVLT--GHTGSVLCLQY--DERVIISGSSDS-----TVRVWDVNTG--EMVNTLIHHCEAVL-H 319 (486)
Q Consensus 254 g~i~i~d~~~~~~--~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg-----~i~vwd~~~~--~~~~~~~~~~~~i~-~ 319 (486)
..|++|++.++.. ...+. .+...+..+.+ ||++|+..+.++ .|++||+.++ +....+..+..... .
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 4577788766542 22232 23334666666 888888777544 8999999877 41344444333333 3
Q ss_pred EEEcCCeEEEEeC----CCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECC-CceEEEEE
Q psy9182 320 LRFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS-SCEFVRTL 393 (486)
Q Consensus 320 ~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~-~~~~~~~~ 393 (486)
+...++.++..+. ++.|.+||+.++. .........+...+..+.+ ++.++++...|+..++|... +++....+
T Consensus 323 ~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 323 VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEEC
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeec
Confidence 3334567777665 3459999988753 1122333444555666777 55677778888887776544 45666666
Q ss_pred cCC-cccEEEEEeC--CCEEE-EEe---CCCcEEEEECCCCeeeEEec
Q psy9182 394 NGH-KRGIACLQYR--DRLVV-SGS---SDNTIRLWDIECGACLRVLE 434 (486)
Q Consensus 394 ~~~-~~~v~~~~~~--~~~l~-~~~---~dg~v~iwd~~~~~~~~~~~ 434 (486)
..+ ...+..+.++ ++.++ +.+ ..++|++||+.+++ ...++
T Consensus 402 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l~ 448 (741)
T 1yr2_A 402 SLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPWE 448 (741)
T ss_dssp BCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEECS
T ss_pred cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEEe
Confidence 643 5567777763 54444 333 34789999999887 33443
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.27 E-value=5.9e-09 Score=96.26 Aligned_cols=227 Identities=13% Similarity=0.062 Sum_probs=150.3
Q ss_pred EEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCC---------cccEEEEEecCCEEEEEeC--CCcE
Q psy9182 238 YCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGH---------TGSVLCLQYDERVIISGSS--DSTV 296 (486)
Q Consensus 238 ~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~~~l~~~~~--dg~i 296 (486)
+.+++++++++++. .++.|.+||..+++.+..+... ...-..++.||++++++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 78999999887775 3678999999999998877522 1122455669999888864 6899
Q ss_pred EEEECCCCcEEEEecccCccEEEEEE-cCCeEEEEeCCCcEEEEECCC-CCceeeEE-eeecCcccEE-EEEe---CCCE
Q psy9182 297 RVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVS-PNEITLRR-VLVGHRAAVN-VVDF---DEKY 369 (486)
Q Consensus 297 ~vwd~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~-~~~~~~~~v~-~~~~---~~~~ 369 (486)
.++|+.+++.+.++.... ...+.. ....+++.+.||.+.+.++.. ++...... .+......+. ...| +|++
T Consensus 163 sVID~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~ 240 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL 240 (386)
T ss_dssp EEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred EEEECCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcE
Confidence 999999999998885432 112222 245777888999999999976 44321110 1111111121 1233 5555
Q ss_pred EEEEeCCCcEEEEECCCce--EEEEEc------------CCcccEEEEEeCCCEEEEEeC----------CCcEEEEECC
Q psy9182 370 IVSASGDRTIKVWNTSSCE--FVRTLN------------GHKRGIACLQYRDRLVVSGSS----------DNTIRLWDIE 425 (486)
Q Consensus 370 l~~~~~d~~i~iwd~~~~~--~~~~~~------------~~~~~v~~~~~~~~~l~~~~~----------dg~v~iwd~~ 425 (486)
++ .+.+|.|++.|..+.. ....+. ........+..+++.++.... .+.|.+.|++
T Consensus 241 ~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~ 319 (386)
T 3sjl_D 241 VW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK 319 (386)
T ss_dssp EE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECC
Confidence 44 5568999999997653 333332 111223445556676666542 2579999999
Q ss_pred CCeeeEEecCcccCeEEEEe--cCC-EEEEEe-CCCcEEEEeCCCCC
Q psy9182 426 CGACLRVLEGHEELVRCIRF--DAK-RIVSGA-YDGKIKVWNLVAAL 468 (486)
Q Consensus 426 ~~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~-~dg~v~iwdl~~~~ 468 (486)
+++.+..+..- ..+.+|++ |++ +|+++. .++.|.++|..+..
T Consensus 320 t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 320 TGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp TCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 99999888643 35778888 775 666654 58999999998765
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=5.1e-10 Score=103.80 Aligned_cols=168 Identities=10% Similarity=0.078 Sum_probs=130.1
Q ss_pred ccceEEEEeCCCEEEEEecCCeEEEEECCCce-----------eeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC
Q psy9182 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-----------CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN 302 (486)
Q Consensus 234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~ 302 (486)
....+++++...++++|+.++ +.+|++...+ ...... +.. |+.++|+++.|+++ .++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCFHGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEECCCEEEEE-cCCcEEEEEch
Confidence 456788889999999999885 6669865433 112232 556 99999999999998 88999999998
Q ss_pred CCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEE
Q psy9182 303 TGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382 (486)
Q Consensus 303 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iw 382 (486)
+.........+...+.++.+.+..+++++.||.|.+||+.++.... +...|.+++|..+-++.|..||++++|
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG~~vg~~dg~i~~~ 187 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQLAVLLKDRSFQSF 187 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSEEEEEETTSCEEEE
T ss_pred hhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCceEEEEcCCcEEEE
Confidence 8776666666777788888877679999999999999998776431 346899999965558899999999999
Q ss_pred ECCCceE--EEEE------c---CCcccEEEEEeC--CCEEEE
Q psy9182 383 NTSSCEF--VRTL------N---GHKRGIACLQYR--DRLVVS 412 (486)
Q Consensus 383 d~~~~~~--~~~~------~---~~~~~v~~~~~~--~~~l~~ 412 (486)
+...++. ..++ . +|...|.++.|. +.++++
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9888775 5566 2 367889999995 445554
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=6.3e-10 Score=103.17 Aligned_cols=164 Identities=8% Similarity=0.069 Sum_probs=121.8
Q ss_pred EEEEecCCEEEEEeCCCcEEEEECCCCc-----------EEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc
Q psy9182 278 LCLQYDERVIISGSSDSTVRVWDVNTGE-----------MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE 346 (486)
Q Consensus 278 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----------~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 346 (486)
.+++....++++|+.++ +.+|++...+ ..... .... |..++|+++.|+++ .++.|++||+.+...
T Consensus 43 Lais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~sl~~ 118 (388)
T 1xip_A 43 LDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCFHGDQVLVS-TRNALYSLDLEELSE 118 (388)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEEETTEEEEE-ESSEEEEEESSSTTC
T ss_pred EEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEECCCEEEEE-cCCcEEEEEchhhhc
Confidence 34444778899999885 6679865332 11222 2344 99999965688887 889999999988764
Q ss_pred eeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182 347 ITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 426 (486)
Q Consensus 347 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~ 426 (486)
.. ....+...+..+.+....+++++.||.|.+||+.++.... +...|+|++|+.+-++.|..||.+++|+...
T Consensus 119 ~~---~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~ 191 (388)
T 1xip_A 119 FR---TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRN 191 (388)
T ss_dssp EE---EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred cC---ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEEcCCC
Confidence 32 2334566677877754458889999999999999877643 4568999999866689999999999999987
Q ss_pred Cee--eEEe------c---CcccCeEEEEe--cCCEEEE
Q psy9182 427 GAC--LRVL------E---GHEELVRCIRF--DAKRIVS 452 (486)
Q Consensus 427 ~~~--~~~~------~---~h~~~v~~~~~--~~~~l~s 452 (486)
++. ...+ . +|...|.+|.| ++.++++
T Consensus 192 ~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 192 GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 775 5566 3 47788999999 5566665
No 211
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.23 E-value=1.4e-09 Score=110.24 Aligned_cols=227 Identities=11% Similarity=0.068 Sum_probs=150.4
Q ss_pred eCCCEEEEEecCCeEEEEECCCceeeEEEcCC--c---ccEE-EEEecCCEEEEEe------CCCcEEEEECCCCcEEEE
Q psy9182 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH--T---GSVL-CLQYDERVIISGS------SDSTVRVWDVNTGEMVNT 309 (486)
Q Consensus 242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~v~-~~~~~~~~l~~~~------~dg~i~vwd~~~~~~~~~ 309 (486)
..+..+++++.|+.|..+|..+|+.+..+... . ..+. +-...+..+++++ .+|.|+.||.++|+.+..
T Consensus 119 ~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 119 VWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 35678889999999999999999998877642 1 1111 1112344555554 368999999999999887
Q ss_pred ecccC-------------------------------ccEEEEEEc--CCeEEEEeCCCc-------------------EE
Q psy9182 310 LIHHC-------------------------------EAVLHLRFS--NGMMVTCSKDRS-------------------IA 337 (486)
Q Consensus 310 ~~~~~-------------------------------~~i~~~~~~--~~~l~~~~~dg~-------------------i~ 337 (486)
+.... .....++++ .+.+++++.++. |.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 74210 000135555 368888887763 99
Q ss_pred EEECCCCCceeeEEeeecCc-------cc--EEEEEeCCC---EEEEEeCCCcEEEEECCCceEEEEEcCCcc-c-----
Q psy9182 338 VWDMVSPNEITLRRVLVGHR-------AA--VNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKR-G----- 399 (486)
Q Consensus 338 i~d~~~~~~~~~~~~~~~~~-------~~--v~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~----- 399 (486)
.+|..+++..-..+. ..|. .. ...+.++|+ .++.++.+|.++++|.++|+++...+.... .
T Consensus 279 AlD~~TG~~~W~~~~-~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~ 357 (689)
T 1yiq_A 279 AVNADTGEYVWHYQT-TPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMD 357 (689)
T ss_dssp EEETTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEE
T ss_pred EEEccCCceeEeeec-CCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccC
Confidence 999999986543322 1121 11 123334665 788999999999999999998754331110 0
Q ss_pred -----------------------------------EEEEEeCCCEEEEEeC-----------------------------
Q psy9182 400 -----------------------------------IACLQYRDRLVVSGSS----------------------------- 415 (486)
Q Consensus 400 -----------------------------------v~~~~~~~~~l~~~~~----------------------------- 415 (486)
-.++..+..++++...
T Consensus 358 ~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 358 MKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred ccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 0122223455555421
Q ss_pred ----------------CCcEEEEECCCCeeeEEecCcccCeE-EEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 416 ----------------DNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 416 ----------------dg~v~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
+|.|..||+.+|+.+..+..+..... .+.-.+..++.++.||.|+.||.+++..
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 37899999999999988875543222 3444888999999999999999998764
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.23 E-value=1.2e-08 Score=93.23 Aligned_cols=225 Identities=11% Similarity=0.086 Sum_probs=143.5
Q ss_pred eEEEEeCCCEEEE-------EecCCeEEEEECCCceeeEEEc----CCcccEEEEEecC--CEEEEEeCCCcEEEEECCC
Q psy9182 237 VYCLQYDDHKIVS-------GLRDNTIKVWDRVSLQCIKVLT----GHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNT 303 (486)
Q Consensus 237 v~~~~~~~~~l~~-------~~~dg~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~--~~l~~~~~dg~i~vwd~~~ 303 (486)
-.++.+++..+++ +..++.|.+||..+++...... ++...+.++.++. ..++.++..+.|.+||..
T Consensus 22 ~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~- 100 (314)
T 1pjx_A 22 GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD- 100 (314)
T ss_dssp EEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-
T ss_pred CceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-
Confidence 3445567777777 5778999999988877643322 2445678888832 355555555579999998
Q ss_pred CcEEEE-ecc----cCccEEEEEEcCC-eEEEEeC-C---------------CcEEEEECCCCCceeeEEeeecCcccEE
Q psy9182 304 GEMVNT-LIH----HCEAVLHLRFSNG-MMVTCSK-D---------------RSIAVWDMVSPNEITLRRVLVGHRAAVN 361 (486)
Q Consensus 304 ~~~~~~-~~~----~~~~i~~~~~~~~-~l~~~~~-d---------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~ 361 (486)
++.... ... ....+.+++++++ .+++++. + +.|..||.. ++..... .+.....
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~----~~~~~~~ 175 (314)
T 1pjx_A 101 GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD----TAFQFPN 175 (314)
T ss_dssp SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE----EEESSEE
T ss_pred CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec----cCCCCcc
Confidence 765433 221 1234678888753 4444443 3 467777765 3322111 1112223
Q ss_pred EE--E----eCCCEEEEE-eCCCcEEEEECC-Cce-----EEEEEcCCc-ccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182 362 VV--D----FDEKYIVSA-SGDRTIKVWNTS-SCE-----FVRTLNGHK-RGIACLQYR--DRLVVSGSSDNTIRLWDIE 425 (486)
Q Consensus 362 ~~--~----~~~~~l~~~-~~d~~i~iwd~~-~~~-----~~~~~~~~~-~~v~~~~~~--~~~l~~~~~dg~v~iwd~~ 425 (486)
.+ . .+++.++.+ ..++.|.+||.. +++ ....+..+. .....+.++ |+++++...++.|.+||.+
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 33 3 345555555 467899999976 443 223333443 456667764 7777777788999999998
Q ss_pred CCeeeEEecCcccCeEEEEe--cCCEEE-EEeCCCcEEEEeCCCC
Q psy9182 426 CGACLRVLEGHEELVRCIRF--DAKRIV-SGAYDGKIKVWNLVAA 467 (486)
Q Consensus 426 ~~~~~~~~~~h~~~v~~~~~--~~~~l~-s~~~dg~v~iwdl~~~ 467 (486)
+++.+..+..+...+.++++ +++.|+ +...++.|..|++...
T Consensus 256 ~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 88877777777778999999 777555 4455688999998754
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.21 E-value=1.2e-07 Score=85.74 Aligned_cols=213 Identities=11% Similarity=0.012 Sum_probs=127.9
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeE-EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE-ecccCccEE
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIK-VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT-LIHHCEAVL 318 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~i~ 318 (486)
++..+++...++.|..||.. ++... ........+.++.+ ++++.++...++.|..+|.. ++.... +......+.
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~ 149 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPA 149 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE
T ss_pred CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCce
Confidence 44444444445677777766 44322 12223355677777 46666666667889999987 655432 233345678
Q ss_pred EEEEcC-CeEEEEe-CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE-E
Q psy9182 319 HLRFSN-GMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT-L 393 (486)
Q Consensus 319 ~~~~~~-~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~-~ 393 (486)
.+.+.+ +.++++. .++.|..||. +++... .........+..+.+ ++++.++....+.|.+||. +++.... +
T Consensus 150 ~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 225 (300)
T 2qc5_A 150 FITLGSDNALWFTENQNNSIGRITN-TGKLEE--YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDI 225 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred eEEECCCCCEEEEecCCCeEEEECC-CCcEEE--eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEEC
Confidence 888864 3444444 4788999998 444321 122233445677777 5666666656678999998 4544332 3
Q ss_pred cCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182 394 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 394 ~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl 464 (486)
..+...+.++.++ +++.++...++.|..||.. ++.... +......+.++++ +|+..+ ++.. .|..+|.
T Consensus 226 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~~-~i~~~~p 298 (300)
T 2qc5_A 226 PTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWF-ALKC-KIGKLNL 298 (300)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEE-ECSS-EEEEEEE
T ss_pred CCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEE-EccC-ceEEeCC
Confidence 3345567778775 6666655567899999984 543322 3334456788888 455444 4444 6666664
No 214
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.19 E-value=6e-12 Score=117.95 Aligned_cols=190 Identities=14% Similarity=0.112 Sum_probs=116.1
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEE--ecCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc-E-E
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ--YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA-V-L 318 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-i-~ 318 (486)
++..+++++.||.|+.||..+|+.+..+.. +.+.+.. .++..+++++.||.|+.||.++|+.+..+..+... + .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 678899999999999999999999988876 3443322 25667777789999999999999877666433111 1 0
Q ss_pred EEEE-cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc
Q psy9182 319 HLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 397 (486)
Q Consensus 319 ~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 397 (486)
...+ .++.+++++.++.|+.||..+++...... .+. . .....++..+++++.|+.|+.||.++++.+..+..+.
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~---~~~-~-~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLS---SAF-A-DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEec---CCC-c-ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 1111 35678888899999999999887653222 111 1 1223377888999999999999999998776654321
Q ss_pred ccEEEEEeCC-----CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEE
Q psy9182 398 RGIACLQYRD-----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 442 (486)
Q Consensus 398 ~~v~~~~~~~-----~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 442 (486)
.....+++ ..+++++.||.|+.||.++|+.+..... ..++..
T Consensus 161 --~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~ 207 (369)
T 2hz6_A 161 --YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVA 207 (369)
T ss_dssp --ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEE
T ss_pred --ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEE
Confidence 11122222 5677889999999999999999888764 344443
No 215
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.19 E-value=2.8e-08 Score=100.44 Aligned_cols=184 Identities=10% Similarity=0.138 Sum_probs=117.1
Q ss_pred cCCEEEEEeCCC-------------------cEEEEECCCCcEEEEecccC----------ccE-EEEEEcC---CeEEE
Q psy9182 283 DERVIISGSSDS-------------------TVRVWDVNTGEMVNTLIHHC----------EAV-LHLRFSN---GMMVT 329 (486)
Q Consensus 283 ~~~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~~----------~~i-~~~~~~~---~~l~~ 329 (486)
++..++.+..++ .|..+|.++|+.+..++... .++ ......+ +.++.
T Consensus 253 ~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 253 ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 567777776553 48889999998887765321 111 2222233 46888
Q ss_pred EeCCCcEEEEECCCCCceeeEEeee--------cCccc--------------------------EEEEEeCCCEEEEEeC
Q psy9182 330 CSKDRSIAVWDMVSPNEITLRRVLV--------GHRAA--------------------------VNVVDFDEKYIVSASG 375 (486)
Q Consensus 330 ~~~dg~i~i~d~~~~~~~~~~~~~~--------~~~~~--------------------------v~~~~~~~~~l~~~~~ 375 (486)
++.+|.++++|..+++.+....... ..... -.+++.+..++++...
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~ 412 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQ 412 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEE
T ss_pred ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeCh
Confidence 8889999999998887653322110 00000 1133335566666432
Q ss_pred -------------------------------------------CCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEE
Q psy9182 376 -------------------------------------------DRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVV 411 (486)
Q Consensus 376 -------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~ 411 (486)
.+.|..||+.+++.+.++....... ..+...+.+++
T Consensus 413 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~ 492 (677)
T 1kb0_A 413 NVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVF 492 (677)
T ss_dssp ECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE
T ss_pred hcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEE
Confidence 2789999999999888876432211 23555788899
Q ss_pred EEeCCCcEEEEECCCCeeeEEecCccc-CeEEEE--ecCCEEE-EEeC----------------CCcEEEEeCCC
Q psy9182 412 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIR--FDAKRIV-SGAY----------------DGKIKVWNLVA 466 (486)
Q Consensus 412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~-~v~~~~--~~~~~l~-s~~~----------------dg~v~iwdl~~ 466 (486)
.++.||.+++||.++|+.+..+..... ...-+. .+|+.++ +.+. .+.+..|.+..
T Consensus 493 ~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 493 QGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred EECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 999999999999999999999874432 222334 3776543 3222 36788888874
No 216
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.18 E-value=5.9e-09 Score=96.22 Aligned_cols=221 Identities=10% Similarity=0.101 Sum_probs=143.3
Q ss_pred EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV 317 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i 317 (486)
+++++..++....++.++.| .++....+..+...+.++.| ++++++++..++.|.+||..+++.......+...+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 89 (333)
T 2dg1_A 13 YSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANP 89 (333)
T ss_dssp SCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSE
T ss_pred ecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCc
Confidence 33444445555667788888 34556666667677788888 57777778888999999999887765544556779
Q ss_pred EEEEEcCC-eEEEEe-CC----CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC------CCcEEEEE
Q psy9182 318 LHLRFSNG-MMVTCS-KD----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG------DRTIKVWN 383 (486)
Q Consensus 318 ~~~~~~~~-~l~~~~-~d----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~------d~~i~iwd 383 (486)
.+++++++ .++++. .+ +.|.+||..++....... .......+..+.+ +++++++... .+.|..+|
T Consensus 90 ~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 90 AAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp EEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC
T ss_pred ceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEe
Confidence 99999754 444444 44 589999988765431111 1123456777777 5666666543 35677777
Q ss_pred CCCceEEEEEcCCcccEEEEEeC--CCEEE-EEeCCCcEEEEECCC-CeeeEE--------ecCcccCeEEEEe--cCCE
Q psy9182 384 TSSCEFVRTLNGHKRGIACLQYR--DRLVV-SGSSDNTIRLWDIEC-GACLRV--------LEGHEELVRCIRF--DAKR 449 (486)
Q Consensus 384 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~~-~~~~~~--------~~~h~~~v~~~~~--~~~~ 449 (486)
..+++... +..+......+.++ ++.|+ +.+.++.|.+||+.+ +..+.. +.++ ..+..+++ +|+.
T Consensus 169 ~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l 246 (333)
T 2dg1_A 169 PDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNL 246 (333)
T ss_dssp TTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCE
T ss_pred CCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCE
Confidence 66555433 22233345667664 66554 445678999999964 333221 1222 35678888 6777
Q ss_pred EEEEeCCCcEEEEeCCC
Q psy9182 450 IVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 450 l~s~~~dg~v~iwdl~~ 466 (486)
+++...++.|.+||...
T Consensus 247 ~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 247 YVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp EEEEETTTEEEEECTTS
T ss_pred EEEEcCCCEEEEECCCC
Confidence 77777789999999853
No 217
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.16 E-value=7.5e-08 Score=97.25 Aligned_cols=320 Identities=9% Similarity=0.071 Sum_probs=187.9
Q ss_pred CcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS 194 (486)
Q Consensus 115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~ 194 (486)
.+..|+.++.++.|.-+|..+|+.+..+.............. ......+.+ .+..++.++.|+.|..+|..+++
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~v~v~~~dg~l~alD~~tG~ 138 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCC-----DAVNRGVAL-WGDKVYVGTLDGRLIALDAKTGK 138 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTT-----CSCCCCCEE-EBTEEEEECTTSEEEEEETTTCC
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccc-----cCCccceEE-ECCEEEEEcCCCEEEEEECCCCC
Confidence 355777788899999999999999888764432110000000 000011111 23345666677888888876665
Q ss_pred ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec------CCeEEEEECCCceeeE
Q psy9182 195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR------DNTIKVWDRVSLQCIK 268 (486)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~ 268 (486)
............ . .......++ .+..++++.. +|.|..+|..+|+.+.
T Consensus 139 ~~W~~~~~~~~~---------~-------------~~~~~~P~v----~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 139 AIWSQQTTDPAK---------P-------------YSITGAPRV----VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EEEEEECSCTTS---------S-------------CBCCSCCEE----ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EeeeeccCCCCC---------c-------------ceecCCCEE----ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 443221110000 0 000011111 2345555543 5899999999999998
Q ss_pred EEcCCc---c---------------------------cE-EEEEe--cCCEEEEEeCCC-------------------cE
Q psy9182 269 VLTGHT---G---------------------------SV-LCLQY--DERVIISGSSDS-------------------TV 296 (486)
Q Consensus 269 ~~~~~~---~---------------------------~v-~~~~~--~~~~l~~~~~dg-------------------~i 296 (486)
.+.... . .+ ..+++ +...++.++.++ .|
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 775311 0 00 12344 457888887766 39
Q ss_pred EEEECCCCcEEEEeccc--C-------ccE--EEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeee--------
Q psy9182 297 RVWDVNTGEMVNTLIHH--C-------EAV--LHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLV-------- 354 (486)
Q Consensus 297 ~vwd~~~~~~~~~~~~~--~-------~~i--~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------- 354 (486)
..+|.++|+.+..++.. . .+. ..+.+.+. .++.++.+|.++++|..+++.+.......
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 99999999999887642 1 222 22334443 58889999999999999988652211100
Q ss_pred -cCcc--------------------------cEEEEEeCCCEEEEE----------------------------------
Q psy9182 355 -GHRA--------------------------AVNVVDFDEKYIVSA---------------------------------- 373 (486)
Q Consensus 355 -~~~~--------------------------~v~~~~~~~~~l~~~---------------------------------- 373 (486)
.... .-.++..+...++..
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 0000 001222233333321
Q ss_pred --eCCCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCccc----CeEEEEec
Q psy9182 374 --SGDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE----LVRCIRFD 446 (486)
Q Consensus 374 --~~d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~----~v~~~~~~ 446 (486)
..+|.|..||+.+++.+.+...+.... ..+...+.+++.++.||.|+.||.++|+.+..++.... ++.. ..+
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~-~~~ 511 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF-ELA 511 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EET
T ss_pred CCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE-EEC
Confidence 124789999999999987776443322 34556788999999999999999999999988865432 2222 336
Q ss_pred CCE-EEEEeC--------------------CCcEEEEeCCCC
Q psy9182 447 AKR-IVSGAY--------------------DGKIKVWNLVAA 467 (486)
Q Consensus 447 ~~~-l~s~~~--------------------dg~v~iwdl~~~ 467 (486)
|+. ++.++. .+.|.++.+...
T Consensus 512 G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~ 553 (668)
T 1kv9_A 512 GRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGK 553 (668)
T ss_dssp TEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCC
T ss_pred CEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCcc
Confidence 663 444332 347888888653
No 218
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.14 E-value=7.5e-10 Score=102.05 Aligned_cols=209 Identities=12% Similarity=0.028 Sum_probs=137.9
Q ss_pred CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc
Q psy9182 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323 (486)
Q Consensus 244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~ 323 (486)
+..+.+++.+ |..+|. +++.+..+.............+..+.+++.++.|..+|.. ++...........+.++...
T Consensus 70 ~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~ 145 (330)
T 3hxj_A 70 DGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVS 145 (330)
T ss_dssp TTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC
T ss_pred CCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEc
Confidence 4456666655 888885 5555433332222222223346778888889999999998 87777666555555555665
Q ss_pred -CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE
Q psy9182 324 -NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA 401 (486)
Q Consensus 324 -~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 401 (486)
++.+++++.++.|..+|.. ++..... ......+.++.. .+..+..++ +.|..+| .+++...........+.
T Consensus 146 ~~g~l~vgt~~~~l~~~d~~-g~~~~~~---~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~ 218 (330)
T 3hxj_A 146 EDGTIYVGSNDNYLYAINPD-GTEKWRF---KTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVT 218 (330)
T ss_dssp TTSCEEEECTTSEEEEECTT-SCEEEEE---ECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCS
T ss_pred CCCEEEEEcCCCEEEEECCC-CCEeEEE---ecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCccee
Confidence 5688889989999999988 5543222 122334444555 234455555 7899999 77877777776656677
Q ss_pred EEEeCC-CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEec-CCEEEEEeCCCcEEEEeC
Q psy9182 402 CLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-AKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 402 ~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~v~iwdl 464 (486)
++..++ ..|..++.++.|..+|. +++.+..+......+.++..+ +..|..++.+|.|..+|.
T Consensus 219 ~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 219 RPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp CCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred ceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 777763 37777888888999984 577776666554445556664 667888888988999985
No 219
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.13 E-value=5.3e-08 Score=88.86 Aligned_cols=177 Identities=8% Similarity=0.154 Sum_probs=107.6
Q ss_pred EEEEecCCeEEEEECCCceeeEE-EcC----CcccEEEEEe--cCCEEEEEeCC---------------CcEEEEECCCC
Q psy9182 247 IVSGLRDNTIKVWDRVSLQCIKV-LTG----HTGSVLCLQY--DERVIISGSSD---------------STVRVWDVNTG 304 (486)
Q Consensus 247 l~~~~~dg~i~i~d~~~~~~~~~-~~~----~~~~v~~~~~--~~~~l~~~~~d---------------g~i~vwd~~~~ 304 (486)
+.+++..+.|.+||.. ++.... ... ....+.++.+ ++++.++...+ +.|..||.. +
T Consensus 85 l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (314)
T 1pjx_A 85 LFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G 162 (314)
T ss_dssp EEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred EEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence 3333334466777766 544322 111 1123566666 56666655544 567777765 5
Q ss_pred cEEEEecccCccEEEEEEc----CC--eEEEE-eCCCcEEEEECC-CCCce--eeEEeeecCc-ccEEEEEe--CCCEEE
Q psy9182 305 EMVNTLIHHCEAVLHLRFS----NG--MMVTC-SKDRSIAVWDMV-SPNEI--TLRRVLVGHR-AAVNVVDF--DEKYIV 371 (486)
Q Consensus 305 ~~~~~~~~~~~~i~~~~~~----~~--~l~~~-~~dg~i~i~d~~-~~~~~--~~~~~~~~~~-~~v~~~~~--~~~~l~ 371 (486)
+..... .+......++++ ++ .++++ ..++.|.+||+. .+... ........+. .....+.+ +|++.+
T Consensus 163 ~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v 241 (314)
T 1pjx_A 163 QMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV 241 (314)
T ss_dssp CEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE
T ss_pred CEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE
Confidence 543322 223345677777 65 45555 467899999986 33211 1112222232 44566766 677777
Q ss_pred EEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEE-EEeCCCcEEEEECCC
Q psy9182 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVV-SGSSDNTIRLWDIEC 426 (486)
Q Consensus 372 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~v~iwd~~~ 426 (486)
+...++.|.+||..+++.+..+..+...+.++.+ +++.|+ +...++.|..|++..
T Consensus 242 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 242 ANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 7778889999999878877777777677888887 467454 445568899999864
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.12 E-value=4.8e-08 Score=91.87 Aligned_cols=230 Identities=11% Similarity=0.051 Sum_probs=151.7
Q ss_pred eEEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCC---------cccEEEEEecCCEEEEEeC--CCc
Q psy9182 237 VYCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGH---------TGSVLCLQYDERVIISGSS--DST 295 (486)
Q Consensus 237 v~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~~~l~~~~~--dg~ 295 (486)
-+.+++|+++++++. .++.|.++|..+++.+..+... ...-..++.|+++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 577899999888876 4678999999999988877521 1112345558999998864 578
Q ss_pred EEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEE-eeecCcccE---EEEEeCCCEE
Q psy9182 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRR-VLVGHRAAV---NVVDFDEKYI 370 (486)
Q Consensus 296 i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~v---~~~~~~~~~l 370 (486)
|.+.|+.+++.+.++..... ..+... +..+++.+.||.+.+.++.+++...... .+......+ ..+..++..+
T Consensus 202 VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~ 279 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRL 279 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEE
T ss_pred EEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEE
Confidence 99999999999888765322 222222 3466777889999999985544331100 011111111 1223366776
Q ss_pred EEEeCCCcEEEEECCCceEE--EEEc------------CCcccEEEEEeCCCEEEEEeC----------CCcEEEEECCC
Q psy9182 371 VSASGDRTIKVWNTSSCEFV--RTLN------------GHKRGIACLQYRDRLVVSGSS----------DNTIRLWDIEC 426 (486)
Q Consensus 371 ~~~~~d~~i~iwd~~~~~~~--~~~~------------~~~~~v~~~~~~~~~l~~~~~----------dg~v~iwd~~~ 426 (486)
+..+..+.+.+.|....... ..+. ........+..+++.+++... ++.|.++|+.+
T Consensus 280 ~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T 359 (426)
T 3c75_H 280 VWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET 359 (426)
T ss_dssp EEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred EEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC
Confidence 66677889999998654321 1111 011112355666676665532 35799999999
Q ss_pred CeeeEEecCcccCeEEEEe--cCC-EEEEEe-CCCcEEEEeCCCCCC
Q psy9182 427 GACLRVLEGHEELVRCIRF--DAK-RIVSGA-YDGKIKVWNLVAALD 469 (486)
Q Consensus 427 ~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~-~dg~v~iwdl~~~~~ 469 (486)
++.+..+.... ....+.| |++ +++++. .++.|.++|+.+...
T Consensus 360 ~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 360 GERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp CCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 99999886432 4677888 888 888888 599999999987653
No 221
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.10 E-value=5.4e-08 Score=92.24 Aligned_cols=225 Identities=10% Similarity=0.123 Sum_probs=144.6
Q ss_pred eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCC--cEEEEECCCCcEEEEe----
Q psy9182 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS--TVRVWDVNTGEMVNTL---- 310 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~---- 310 (486)
-+++.++++++++...++.|++||..+++.............++..+++.|+++..++ .|.++|...+.....+
T Consensus 135 ~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~ 214 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLG 214 (409)
T ss_dssp EEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECC
T ss_pred EEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeecc
Confidence 3556677887777777799999999988776655543322233444778888888766 7999998766544444
Q ss_pred cccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEe-eecCcccE-E-EEEe--C-CCEEEEEeCCCcEEEE
Q psy9182 311 IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRV-LVGHRAAV-N-VVDF--D-EKYIVSASGDRTIKVW 382 (486)
Q Consensus 311 ~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~v-~-~~~~--~-~~~l~~~~~d~~i~iw 382 (486)
........++++++ +.|+++..++.|+.||..++........ ..+....- . .+.+ + +.++++...++.|+.|
T Consensus 215 ~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~ 294 (409)
T 3hrp_A 215 STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKI 294 (409)
T ss_dssp TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 21345567788876 4777777888999999987653211000 11111111 1 5555 3 4455555567889999
Q ss_pred ECCCceEEEEEcCCc---------------ccEEEEEeC--CCEEEEEe-CCCcEEEEECCCCeeeEEecCc--------
Q psy9182 383 NTSSCEFVRTLNGHK---------------RGIACLQYR--DRLVVSGS-SDNTIRLWDIECGACLRVLEGH-------- 436 (486)
Q Consensus 383 d~~~~~~~~~~~~~~---------------~~v~~~~~~--~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~h-------- 436 (486)
+.... +..+.++. .....++++ ++++++-. .++.|+.|++.+++. ..+.++
T Consensus 295 ~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~ 371 (409)
T 3hrp_A 295 TPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQID 371 (409)
T ss_dssp CTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCC
T ss_pred ecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCC
Confidence 97643 33333221 235667764 77777777 789999999887864 344333
Q ss_pred -------ccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182 437 -------EELVRCIRF--DAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 437 -------~~~v~~~~~--~~~~l~s~~~dg~v~iwdl 464 (486)
-.....|++ ++..+++-..++.|+.+++
T Consensus 372 g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 372 GTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp BSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 235788998 5566666667788888775
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.05 E-value=5.9e-08 Score=98.90 Aligned_cols=174 Identities=14% Similarity=0.157 Sum_probs=100.7
Q ss_pred CeEEEEECCCcee--eEEEcC---CcccEEEEEe--cCCEEEEEeC----CCcEEEEECCCCc-EEEEecccCccEEE-E
Q psy9182 254 NTIKVWDRVSLQC--IKVLTG---HTGSVLCLQY--DERVIISGSS----DSTVRVWDVNTGE-MVNTLIHHCEAVLH-L 320 (486)
Q Consensus 254 g~i~i~d~~~~~~--~~~~~~---~~~~v~~~~~--~~~~l~~~~~----dg~i~vwd~~~~~-~~~~~~~~~~~i~~-~ 320 (486)
..|++|++.+... ...+.. |......+.+ |+++|+.... +..|+++|+.++. ....+..+...... +
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~ 287 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLV 287 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEE
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEE
Confidence 3588888876542 233332 3334556666 7887755432 2589999998763 33444444444443 3
Q ss_pred EEcCCeEEEEeC----CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC---cEEEEECCCceEEEEE
Q psy9182 321 RFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR---TIKVWNTSSCEFVRTL 393 (486)
Q Consensus 321 ~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~ 393 (486)
...++.++..+. .+.|..+|+.++....... +..+...+..++++++.|+....++ .|++||+..+. ...+
T Consensus 288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~-l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l 365 (693)
T 3iuj_A 288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRD-LIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREV 365 (693)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE-EECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEE-EecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEe
Confidence 334555554443 3679999998765421112 2233333337777888777665443 68999987543 4455
Q ss_pred cC-CcccEEEEEe--CCCEEEEEeCC----CcEEEEECCCCee
Q psy9182 394 NG-HKRGIACLQY--RDRLVVSGSSD----NTIRLWDIECGAC 429 (486)
Q Consensus 394 ~~-~~~~v~~~~~--~~~~l~~~~~d----g~v~iwd~~~~~~ 429 (486)
.. ....+..+.+ ++..++....+ +.|..||+.+++.
T Consensus 366 ~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 366 ALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 42 3344555554 34444444333 8899999987764
No 223
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.04 E-value=3.8e-07 Score=90.18 Aligned_cols=225 Identities=12% Similarity=0.062 Sum_probs=143.5
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCCcc----cEE-EEEecCCEEEEEeC------CCcEEEEECCCCcEEEEec
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVL-CLQYDERVIISGSS------DSTVRVWDVNTGEMVNTLI 311 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~v~-~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~ 311 (486)
.+..+++++.|+.|..+|..+|+.+........ .+. +-...+..+++++. +|.|..+|.++|+.+.++.
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 456788888899999999999998877653220 121 11123456666655 7899999999999988765
Q ss_pred ccCcc-------------------------------------E-EEEEEcC--CeEEEEeCC----------------Cc
Q psy9182 312 HHCEA-------------------------------------V-LHLRFSN--GMMVTCSKD----------------RS 335 (486)
Q Consensus 312 ~~~~~-------------------------------------i-~~~~~~~--~~l~~~~~d----------------g~ 335 (486)
..... + ..+++++ +.++.++.+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32111 0 1234443 566666542 35
Q ss_pred EEEEECCCCCceeeEEeeecC--------cccEE-EEEeCCC---EEEEEeCCCcEEEEECCCceEEEEEcCCc------
Q psy9182 336 IAVWDMVSPNEITLRRVLVGH--------RAAVN-VVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHK------ 397 (486)
Q Consensus 336 i~i~d~~~~~~~~~~~~~~~~--------~~~v~-~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------ 397 (486)
|..+|..+++..-..+. ..| ..++. ....+|+ .++.++.+|.++++|..+++.+..++...
T Consensus 274 v~Ald~~tG~~~W~~~~-~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQK-TPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEETTTCCEEEEEES-STTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEecCCCcEEEEecC-CCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 99999999886543322 111 12222 2223664 57788899999999999999887765321
Q ss_pred -------ccE----------------------------EEEEeCCCEEEEEe----------------------------
Q psy9182 398 -------RGI----------------------------ACLQYRDRLVVSGS---------------------------- 414 (486)
Q Consensus 398 -------~~v----------------------------~~~~~~~~~l~~~~---------------------------- 414 (486)
.++ .++..+..++++..
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 011 12222234444432
Q ss_pred ---------CCCcEEEEECCCCeeeEEecCcccCeEE--EEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 415 ---------SDNTIRLWDIECGACLRVLEGHEELVRC--IRFDAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 415 ---------~dg~v~iwd~~~~~~~~~~~~h~~~v~~--~~~~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
.+|.|..||+.+|+.+..+.... .+.+ +...+..++.++.||.|+.||..++..
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 35789999999999988775332 2222 333678888899999999999988753
No 224
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=8.7e-07 Score=80.10 Aligned_cols=210 Identities=10% Similarity=0.074 Sum_probs=131.2
Q ss_pred EEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc--
Q psy9182 238 YCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH-- 312 (486)
Q Consensus 238 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-- 312 (486)
..++++ +.++++...++.|..||..+++.. .+. ....+.++.+ ++++++ +. ++.|.+||..+++.......
T Consensus 18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCT
T ss_pred CeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCC
Confidence 345564 445666667889999999887653 333 3456788887 667444 44 56799999988765433321
Q ss_pred --cCccEEEEEEcCC-eEEEEeC----------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCC
Q psy9182 313 --HCEAVLHLRFSNG-MMVTCSK----------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGD 376 (486)
Q Consensus 313 --~~~~i~~~~~~~~-~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d 376 (486)
....+..+.++++ .+++++. ...-.+|.+........ ..........+.+ +++.++ +.+.+
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~---~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK---YFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE---EEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE---EeeccccccceEEcCCCCEEEEecCCC
Confidence 1234677888754 4444431 12234444433222211 1122233456666 677665 44557
Q ss_pred CcEEEEEC--CCceE-----EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--
Q psy9182 377 RTIKVWNT--SSCEF-----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 445 (486)
Q Consensus 377 ~~i~iwd~--~~~~~-----~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-- 445 (486)
+.|.+||+ .++.. ...+..+......+.++ |++.++...++.|.+||..+|+.+..+..+...+++++|
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g 250 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGG 250 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEES
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeC
Confidence 88999987 45543 22233333456667764 777777777889999999999999999888778999999
Q ss_pred -cCCEEEEEe
Q psy9182 446 -DAKRIVSGA 454 (486)
Q Consensus 446 -~~~~l~s~~ 454 (486)
+++.|+.++
T Consensus 251 ~d~~~L~vt~ 260 (297)
T 3g4e_A 251 KNYSEMYVTC 260 (297)
T ss_dssp GGGCEEEEEE
T ss_pred CCCCEEEEEc
Confidence 345554443
No 225
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.03 E-value=8.3e-07 Score=87.71 Aligned_cols=286 Identities=10% Similarity=0.055 Sum_probs=164.5
Q ss_pred cceEEEeec-Cceeeeccc-ccccceeeecCcccc-e---eEEEeecceeEecCCCCceec-cCcce----eecCCCCCc
Q psy9182 116 EKYIVSASG-DRTIKVWNT-SSCEFVRTLNGHKRG-I---ACLQYRDRLVVSGSSDNTIRY-RDEFQ----IVSSSHDDT 184 (486)
Q Consensus 116 ~~~l~tg~~-dg~v~iWd~-~~~~~~~~l~~h~~~-V---~~~~~~~~~~~~~~~d~~i~~-~~~~~----l~s~s~dg~ 184 (486)
+..|..++. ++.|.-+|. .+|+.+..+...... . .+.... .+.+.+ +.+.. ++.++.|+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~---------~~g~av~p~~g~~~~rV~v~t~dg~ 132 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLV---------NRGLAYWPGDGKTPALILKTQLDGN 132 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSC---------CCCCEEECCCSSSCCEEEEECTTSE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcccccccccccc---------ccceEEEecCCcceeEEEEEcCCCE
Confidence 456666776 899999999 999998887643211 0 000000 000111 01222 566667777
Q ss_pred ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe------cCCeEEE
Q psy9182 185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL------RDNTIKV 258 (486)
Q Consensus 185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------~dg~i~i 258 (486)
+..+|..+++........... .........++ .+..+++++ .+|.|+.
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~----------------------~~~~~~ssP~v----~~g~V~vg~~g~e~g~~g~v~A 186 (599)
T 1w6s_A 133 VAALNAETGETVWKVENSDIK----------------------VGSTLTIAPYV----VKDKVIIGSSGAELGVRGYLTA 186 (599)
T ss_dssp EEEEETTTCCEEEEEECCCGG----------------------GTCBCCSCCEE----ETTEEEECCBCGGGTCCCEEEE
T ss_pred EEEEECCCCCEEEeecCCCCC----------------------ccceeecCCEE----ECCEEEEEecccccCCCCeEEE
Confidence 777776655543221110000 00000111111 234555555 3899999
Q ss_pred EECCCceeeEEEcCCccc----------------------------------------EEEEEecCCEEEEEeCC-----
Q psy9182 259 WDRVSLQCIKVLTGHTGS----------------------------------------VLCLQYDERVIISGSSD----- 293 (486)
Q Consensus 259 ~d~~~~~~~~~~~~~~~~----------------------------------------v~~~~~~~~~l~~~~~d----- 293 (486)
+|..+|+.+..+...... ..++..+...++.+..+
T Consensus 187 ~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~ 266 (599)
T 1w6s_A 187 YDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWN 266 (599)
T ss_dssp EETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred EECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcccc
Confidence 999999998877643211 01233355677777665
Q ss_pred -----------CcEEEEECCCCcEEEEecccC----------ccEE-EEE-EcC---CeEEEEeCCCcEEEEECCCCCce
Q psy9182 294 -----------STVRVWDVNTGEMVNTLIHHC----------EAVL-HLR-FSN---GMMVTCSKDRSIAVWDMVSPNEI 347 (486)
Q Consensus 294 -----------g~i~vwd~~~~~~~~~~~~~~----------~~i~-~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~ 347 (486)
+.|..+|.++|+.+..++... .++. .+. ..+ ..++.++.+|.++++|.++++.+
T Consensus 267 ~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 267 ETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp GGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred CcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 379999999999988775432 1222 111 123 25677889999999999998865
Q ss_pred eeEEeee----------cCccc----------------------------EEEEEeCCCEEEEE----------------
Q psy9182 348 TLRRVLV----------GHRAA----------------------------VNVVDFDEKYIVSA---------------- 373 (486)
Q Consensus 348 ~~~~~~~----------~~~~~----------------------------v~~~~~~~~~l~~~---------------- 373 (486)
....... ..... -.++..+..++++.
T Consensus 347 w~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~ 426 (599)
T 1w6s_A 347 SANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYK 426 (599)
T ss_dssp EEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCC
T ss_pred ecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeeccccccc
Confidence 4322110 00000 01111122222221
Q ss_pred -----------------e------CCCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCee
Q psy9182 374 -----------------S------GDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGAC 429 (486)
Q Consensus 374 -----------------~------~d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 429 (486)
+ ..|.|..||+.+++.+.+.+...... ..+...+.+++.++.||.++.||.++|+.
T Consensus 427 ~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 427 AGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp TTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCE
Confidence 1 35789999999999887765322111 22455688888899999999999999999
Q ss_pred eEEecCc
Q psy9182 430 LRVLEGH 436 (486)
Q Consensus 430 ~~~~~~h 436 (486)
+..++..
T Consensus 507 lW~~~l~ 513 (599)
T 1w6s_A 507 LWKFKIP 513 (599)
T ss_dssp EEEEECS
T ss_pred EEEeeCC
Confidence 9988644
No 226
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.03 E-value=1.4e-06 Score=78.57 Aligned_cols=222 Identities=9% Similarity=0.017 Sum_probs=142.3
Q ss_pred eEEEEeCCCEEEEEecCCeEEEEECCCceeeEE-EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE-Eecc
Q psy9182 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV-LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN-TLIH 312 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~ 312 (486)
.+++.+++...++...++.|.+||.. ++.... +......+.++.+ ++++.++...++.|..+|.. ++... ....
T Consensus 24 ~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~ 101 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQ 101 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS
T ss_pred eeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCC
Confidence 34455677777766678999999987 554432 2233356778877 46666665557889999988 65532 2222
Q ss_pred cCccEEEEEEcC-CeEEEEe-CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce
Q psy9182 313 HCEAVLHLRFSN-GMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE 388 (486)
Q Consensus 313 ~~~~i~~~~~~~-~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~ 388 (486)
....+..+++.+ +.++++. .++.|..||.. ++... .........+..+.+ ++++.++...++.|..+|. +++
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 177 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE--YDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGK 177 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE--EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE--ccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCc
Confidence 345678888874 3444444 47889999986 44321 112223455677777 5676666656788999998 555
Q ss_pred EEEE-EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182 389 FVRT-LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462 (486)
Q Consensus 389 ~~~~-~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iw 462 (486)
.... ...+...+..+.++ +++.++....+.|.+||. +++.... +..+...+.++++ +++..++...++.|..|
T Consensus 178 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 256 (300)
T 2qc5_A 178 LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRI 256 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEE
T ss_pred EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEE
Confidence 4432 22344567777775 666666556778999998 4554433 3344567888998 56655555556889999
Q ss_pred eCC
Q psy9182 463 NLV 465 (486)
Q Consensus 463 dl~ 465 (486)
|..
T Consensus 257 ~~~ 259 (300)
T 2qc5_A 257 TND 259 (300)
T ss_dssp CTT
T ss_pred CCC
Confidence 874
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.00 E-value=1.2e-07 Score=96.61 Aligned_cols=226 Identities=14% Similarity=0.096 Sum_probs=137.9
Q ss_pred EEEEeCCCEEEEEe-----cCCeEEEEECCCceeeEE-EcCCcccEEEEEecCCEEEEEeCCCc-------------EEE
Q psy9182 238 YCLQYDDHKIVSGL-----RDNTIKVWDRVSLQCIKV-LTGHTGSVLCLQYDERVIISGSSDST-------------VRV 298 (486)
Q Consensus 238 ~~~~~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~dg~-------------i~v 298 (486)
.+++||+++++.+. ....|++||+.+++.+.. +......-.+.+ |++.|+.++.+.. |++
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEE
Confidence 46889999888543 234799999999986543 221111112344 8998888887743 999
Q ss_pred EECCCCcE----EEEecc-cCccEEEEEEcCC--eEE-EEeC---CCcEEEEECCCCCceeeEEeeecCcccEE-EEEeC
Q psy9182 299 WDVNTGEM----VNTLIH-HCEAVLHLRFSNG--MMV-TCSK---DRSIAVWDMVSPNEITLRRVLVGHRAAVN-VVDFD 366 (486)
Q Consensus 299 wd~~~~~~----~~~~~~-~~~~i~~~~~~~~--~l~-~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~~~~~ 366 (486)
|++.++.. +..... +......+.++++ .++ +... ++.|+++|+.++.... ..+..+..... .+..+
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~--~~l~~~~~~~~~~~~~~ 290 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL--LTVQGDLDADVSLVDNK 290 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC--EEEECSSSSCEEEEEEE
T ss_pred EECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce--EEEeCCCCceEEEEecc
Confidence 99987642 222233 3445678888865 443 3332 3589999998764211 22223333332 24456
Q ss_pred CCEEEEEe-CC---CcEEEEECCCceE--EEEEcCCcccEEEEEeCCCEEEEEeC-CC--cEEEEECCCCeeeEEec-Cc
Q psy9182 367 EKYIVSAS-GD---RTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSS-DN--TIRLWDIECGACLRVLE-GH 436 (486)
Q Consensus 367 ~~~l~~~~-~d---~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~~~~-dg--~v~iwd~~~~~~~~~~~-~h 436 (486)
+..|+..+ .+ +.|..+|+.++.. ...+..|...+..++++++.|+.... ++ .|++||+..+ ....+. .+
T Consensus 291 g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~ 369 (693)
T 3iuj_A 291 GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPG 369 (693)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSS
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCC
Confidence 66555444 33 6799999988654 24455455444477777887776654 44 6899998854 444443 33
Q ss_pred ccCeEEEEe--cCCEEEEEeCC----CcEEEEeCCCC
Q psy9182 437 EELVRCIRF--DAKRIVSGAYD----GKIKVWNLVAA 467 (486)
Q Consensus 437 ~~~v~~~~~--~~~~l~s~~~d----g~v~iwdl~~~ 467 (486)
...+..+.+ +++.|+....+ +.|..||+.++
T Consensus 370 ~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 370 LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 445666666 56655554444 78999998765
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.95 E-value=1.2e-07 Score=87.70 Aligned_cols=270 Identities=8% Similarity=-0.039 Sum_probs=163.9
Q ss_pred eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC----------CCCcceeeeccccccc
Q psy9182 127 TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS----------HDDTILIWDFLNYSET 196 (486)
Q Consensus 127 ~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s----------~dg~i~vWd~~~~~~~ 196 (486)
.|.+.|..+++.+.++.....+ .+.++ +|+++++.+. .++.|.+||..+.+..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~s---------------pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAG---------------HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEEC---------------TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEEC---------------CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 7889999999999998754445 67776 5666666554 4788999998765433
Q ss_pred ccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec--CCeEEE--EECCCceeeEEEcC
Q psy9182 197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR--DNTIKV--WDRVSLQCIKVLTG 272 (486)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~--dg~i~i--~d~~~~~~~~~~~~ 272 (486)
.....+... .........-+.+++||++++++.. +..|.+ +|..+ +..+..
T Consensus 110 ~~I~v~~~~----------------------~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v 164 (368)
T 1mda_H 110 ADIELPDAP----------------------RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS 164 (368)
T ss_dssp EEEEETTSC----------------------SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC
T ss_pred EEEECCCcc----------------------ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC
Confidence 221100000 0000123446778999999998874 467888 88877 444432
Q ss_pred CcccEEEEEec-CCEEEEEeCCCcEEEEECCC-----CcEEEE----ecccCccEEEEEEcCCeEEEEeCCCcEEEEECC
Q psy9182 273 HTGSVLCLQYD-ERVIISGSSDSTVRVWDVNT-----GEMVNT----LIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMV 342 (486)
Q Consensus 273 ~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~-----~~~~~~----~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~ 342 (486)
.. . ..+..+ ...+++.+.||.+.+.|+.+ ++.... +.....+. . ...++.++..+. +.+.+.|..
T Consensus 165 ~~-~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~viD~~ 239 (368)
T 1mda_H 165 AS-C-FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQGDIP 239 (368)
T ss_dssp SS-C-CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEEECC
T ss_pred CC-c-eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEEECC
Confidence 11 1 112333 35566677889999999886 332211 11112233 1 223455565566 899999986
Q ss_pred CCCceeeEEe-----------eecCcccEEEEEeCCCEEEEEeC---------CCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182 343 SPNEITLRRV-----------LVGHRAAVNVVDFDEKYIVSASG---------DRTIKVWNTSSCEFVRTLNGHKRGIAC 402 (486)
Q Consensus 343 ~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~v~~ 402 (486)
.......... ..........+..+++.++++.. ++.+.++|+.+.+.+..+.... ....
T Consensus 240 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~g 318 (368)
T 1mda_H 240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDA 318 (368)
T ss_dssp SSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECE
T ss_pred CCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-Ccce
Confidence 5432111000 00111122356668887776543 2356799999999988887443 3445
Q ss_pred EEe--CCC-EEEEEe-CCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182 403 LQY--RDR-LVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF 445 (486)
Q Consensus 403 ~~~--~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~ 445 (486)
+.+ +++ ++++.. .++.|.++|+.+++.+..+..... ...+++
T Consensus 319 i~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~ 364 (368)
T 1mda_H 319 IIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSV 364 (368)
T ss_dssp EEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEEC
T ss_pred EEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEe
Confidence 555 566 566666 599999999999999999875543 334444
No 229
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=1.8e-07 Score=94.49 Aligned_cols=226 Identities=12% Similarity=0.083 Sum_probs=148.1
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCCc----ccEEE-EEecCCEEEEEeC------CCcEEEEECCCCcEEEEec
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT----GSVLC-LQYDERVIISGSS------DSTVRVWDVNTGEMVNTLI 311 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~v~~-~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~ 311 (486)
.+..+++++.|+.|..+|..+|+.+..+.... ..+.+ -...+..++++.. +|.|..+|.++|+.+..+.
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 46678889999999999999999998776421 11111 1123455666543 5899999999999988775
Q ss_pred ccC---c----------------------------cEEEEEEc--CCeEEEEeCCC-------------------cEEEE
Q psy9182 312 HHC---E----------------------------AVLHLRFS--NGMMVTCSKDR-------------------SIAVW 339 (486)
Q Consensus 312 ~~~---~----------------------------~i~~~~~~--~~~l~~~~~dg-------------------~i~i~ 339 (486)
... . ....++++ .+.+++++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 310 0 00124554 35888887766 39999
Q ss_pred ECCCCCceeeEEeeecCc-------ccE--EEEEeCCC---EEEEEeCCCcEEEEECCCceEEEEEcCCcc---------
Q psy9182 340 DMVSPNEITLRRVLVGHR-------AAV--NVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKR--------- 398 (486)
Q Consensus 340 d~~~~~~~~~~~~~~~~~-------~~v--~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--------- 398 (486)
|..+++..-..+. ..|. ... ..+.++++ .++.++.+|.++++|..+|+.+...+....
T Consensus 276 D~~tG~~~W~~~~-~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 276 RPDTGKLAWHYQV-TPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp CTTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred cCCCCceeeEeec-CCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 9999986543332 1121 222 23445775 688999999999999999998854432110
Q ss_pred ---cE--------------------------EEEEeCCCEEEEE------------------------------------
Q psy9182 399 ---GI--------------------------ACLQYRDRLVVSG------------------------------------ 413 (486)
Q Consensus 399 ---~v--------------------------~~~~~~~~~l~~~------------------------------------ 413 (486)
++ .++..+..++...
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 00 1122222333321
Q ss_pred eCCCcEEEEECCCCeeeEEecCcccCe-EEEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 414 SSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 414 ~~dg~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
..+|.|..||+.+|+.+.....+.... ..+...+..++.++.||.|+.||.+++..
T Consensus 435 ~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 435 VVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp GCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 134889999999999988876443222 24455888999999999999999988753
No 230
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.91 E-value=1.1e-06 Score=86.88 Aligned_cols=223 Identities=11% Similarity=0.061 Sum_probs=141.1
Q ss_pred EEEEEecCCeEEEEECCCceeeEEEcCCcc----cEEE-EEecCCEEEEEe------CCCcEEEEECCCCcEEEEecccC
Q psy9182 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVLC-LQYDERVIISGS------SDSTVRVWDVNTGEMVNTLIHHC 314 (486)
Q Consensus 246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~v~~-~~~~~~~l~~~~------~dg~i~vwd~~~~~~~~~~~~~~ 314 (486)
++++++.|+.|..+|..+|+.+........ .+.+ -...+..+++++ .+|.|+.+|.++|+.+..+....
T Consensus 123 rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 123 LILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 388888999999999999999877653221 1211 112344566655 37999999999999988775422
Q ss_pred cc-------------------------------------E-EEEEE--cCCeEEEEeCC----------------CcEEE
Q psy9182 315 EA-------------------------------------V-LHLRF--SNGMMVTCSKD----------------RSIAV 338 (486)
Q Consensus 315 ~~-------------------------------------i-~~~~~--~~~~l~~~~~d----------------g~i~i 338 (486)
.. + ..+++ ..+.++.++.+ +.|..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 11 0 02233 34577777765 37999
Q ss_pred EECCCCCceeeEEeeecCc--------ccEE-EEE-eCC---CEEEEEeCCCcEEEEECCCceEEEEEcCCc--------
Q psy9182 339 WDMVSPNEITLRRVLVGHR--------AAVN-VVD-FDE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHK-------- 397 (486)
Q Consensus 339 ~d~~~~~~~~~~~~~~~~~--------~~v~-~~~-~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------- 397 (486)
+|..+++..-..+. ..|. ..+. .+. .+| ..++.++.+|.++++|.++|+.+.......
T Consensus 283 ld~~TG~~~W~~q~-~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~ 361 (599)
T 1w6s_A 283 RDADTGEAKFGYQK-TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV 361 (599)
T ss_dssp EETTTCCEEEEEES-STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EeCCCCceeeEeec-CCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence 99999886543322 2221 1222 222 356 467778899999999999999887654211
Q ss_pred -----ccE----------------------------EEEEeCCCEEEEE-------------------------------
Q psy9182 398 -----RGI----------------------------ACLQYRDRLVVSG------------------------------- 413 (486)
Q Consensus 398 -----~~v----------------------------~~~~~~~~~l~~~------------------------------- 413 (486)
.++ .++..+..++++.
T Consensus 362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 441 (599)
T 1w6s_A 362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG 441 (599)
T ss_dssp CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccC
Confidence 000 0111111222111
Q ss_pred --e------CCCcEEEEECCCCeeeEEecCcccCe-EEEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182 414 --S------SDNTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAYDGKIKVWNLVAALD 469 (486)
Q Consensus 414 --~------~dg~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~l~s~~~dg~v~iwdl~~~~~ 469 (486)
+ .+|.|..||+.+|+.+.......... ..+.-.+..++.++.||.|+.||.+++..
T Consensus 442 p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 442 PKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp TTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCE
Confidence 1 45789999999999988775221111 12445788888899999999999998753
No 231
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.91 E-value=7.5e-06 Score=74.98 Aligned_cols=207 Identities=14% Similarity=0.046 Sum_probs=128.7
Q ss_pred EEEEeCC-CEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc--
Q psy9182 238 YCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH-- 312 (486)
Q Consensus 238 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-- 312 (486)
.++++++ ..+++...++.|..||..+++... +. ....+.++.+ ++++++ ++.+ .|.+||..+++.......
T Consensus 54 p~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v-~~~~-gl~~~d~~~g~~~~~~~~~~ 129 (326)
T 2ghs_A 54 PTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLI-ASDD-GLFLRDTATGVLTLHAELES 129 (326)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEE-EETT-EEEEEETTTCCEEEEECSST
T ss_pred CeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEE-EECC-CEEEEECCCCcEEEEeeCCC
Confidence 4566664 456666678899999998876543 33 3456888877 565555 4444 499999988876433221
Q ss_pred --cCccEEEEEEcCC-eEEEEeC-------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcE
Q psy9182 313 --HCEAVLHLRFSNG-MMVTCSK-------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTI 379 (486)
Q Consensus 313 --~~~~i~~~~~~~~-~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i 379 (486)
....+..+.++++ .+++++. .+.|..++ +++ ... ..........+.+ +++.++.+ +.++.|
T Consensus 130 ~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~---~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 130 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTK---LFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEE---EEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc-EEE---eeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 1235778888754 4444442 24566665 332 211 1112223456666 67766554 456899
Q ss_pred EEEECC--Cc-e-----EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---c
Q psy9182 380 KVWNTS--SC-E-----FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---D 446 (486)
Q Consensus 380 ~iwd~~--~~-~-----~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~ 446 (486)
.+||+. ++ + ....+.........+.++ |++.++...++.|.+||. +++.+..+..+...+++++| +
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence 999986 55 3 222333334455667764 676666667789999998 57877888777778999999 3
Q ss_pred CCEEEEEeC
Q psy9182 447 AKRIVSGAY 455 (486)
Q Consensus 447 ~~~l~s~~~ 455 (486)
++.|+.++.
T Consensus 283 ~~~L~vt~~ 291 (326)
T 2ghs_A 283 ASRLLVTSA 291 (326)
T ss_dssp SCEEEEEEB
T ss_pred CCEEEEEec
Confidence 455654443
No 232
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.90 E-value=7.7e-07 Score=84.28 Aligned_cols=181 Identities=13% Similarity=0.089 Sum_probs=108.9
Q ss_pred EEEEeCCCEEEEEecCC--eEEEEECCCceeeEEE----cCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182 238 YCLQYDDHKIVSGLRDN--TIKVWDRVSLQCIKVL----TGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNT 309 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~----~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~ 309 (486)
.+++++++.|+++..++ .|.+++...+.....+ ......+.+++++ +..|+++..++.|+.||..++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 45666777777776655 6777776655443333 2133445566663 45666677788999999987764322
Q ss_pred ----ecccCccE--EEEEEcC--CeE-EEEeCCCcEEEEECCCCCceeeEEeeecC---------------cccEEEEEe
Q psy9182 310 ----LIHHCEAV--LHLRFSN--GMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGH---------------RAAVNVVDF 365 (486)
Q Consensus 310 ----~~~~~~~i--~~~~~~~--~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------------~~~v~~~~~ 365 (486)
.......- ..+++++ +.| ++-..++.|+.|+.... .. ...++ -.....+++
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~---~~~g~~~~~g~~dg~~~~~~~~~P~gia~ 330 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CE---WFCGSATQKTVQDGLREEALFAQPNGMTV 330 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EE---EEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EE---EEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence 11111111 2788876 344 44456788999987643 11 11111 123566666
Q ss_pred --CCCEEEEEe-CCCcEEEEECCCceEEEEEcCC---------------cccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182 366 --DEKYIVSAS-GDRTIKVWNTSSCEFVRTLNGH---------------KRGIACLQYR--DRLVVSGSSDNTIRLWDI 424 (486)
Q Consensus 366 --~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~---------------~~~v~~~~~~--~~~l~~~~~dg~v~iwd~ 424 (486)
+|+++++-. .++.|+.||+.+++. ..+.++ -.....++++ +.++++-..++.|+.+++
T Consensus 331 d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 331 DEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 677777777 789999999877764 344333 1235566664 555666666677776654
No 233
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.87 E-value=1.6e-05 Score=82.33 Aligned_cols=317 Identities=8% Similarity=0.054 Sum_probs=182.0
Q ss_pred ccccCCccCcceEEEeecCceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182 107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI 185 (486)
Q Consensus 107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i 185 (486)
+.++...+++.+.+ |..++-+..||..+++..... ..+...|.++..+ .++ .+..++.++-+
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d---------------~~g-~lwigt~~~Gl 237 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQ---------------SPT-RIWVATEGAGL 237 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEE---------------ETT-EEEEEEBSSCE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEc---------------CCC-CEEEEECCCCe
Confidence 55566666665444 555555888888776543321 1223456666553 122 23334434346
Q ss_pred eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEECCCc
Q psy9182 186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSL 264 (486)
Q Consensus 186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~ 264 (486)
..||..+............ ...-....+.++..+ ...+..|+.+ -|.+||..++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~------------------------~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~ 292 (795)
T 4a2l_A 238 FLINPKTKEIKNYLHSPSN------------------------PKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTD 292 (795)
T ss_dssp EEEETTTTEEEEECCCTTC------------------------TTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTT
T ss_pred EEEeCCCCeEEEeecCCCC------------------------ccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCC
Confidence 6777543222111100000 000122345666554 3456667766 5889998877
Q ss_pred eeeEEEcC-------CcccEEEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEec------ccCccEEEEEEcC-CeEEE
Q psy9182 265 QCIKVLTG-------HTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLI------HHCEAVLHLRFSN-GMMVT 329 (486)
Q Consensus 265 ~~~~~~~~-------~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~~~~~i~~~~~~~-~~l~~ 329 (486)
+....... ....|.++..| ...+..|+.++-|..|+..++....... .....|.++..+. +.+.+
T Consensus 293 ~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi 372 (795)
T 4a2l_A 293 SFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI 372 (795)
T ss_dssp EEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE
T ss_pred eEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE
Confidence 65443221 23568888874 3457778887789999976654332211 1235688888764 58889
Q ss_pred EeCCCcEEEEECCCCCceeeEEee-----ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc----CCcc
Q psy9182 330 CSKDRSIAVWDMVSPNEITLRRVL-----VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN----GHKR 398 (486)
Q Consensus 330 ~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~ 398 (486)
|+.++.|..||..++......... ......|.++.. +++.|..|+.++-|..||..+++...... ....
T Consensus 373 Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~ 452 (795)
T 4a2l_A 373 GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNE 452 (795)
T ss_dssp EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCS
T ss_pred EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCC
Confidence 999989999998765432111100 012356778877 45547778887789999998876433222 1345
Q ss_pred cEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecC------cccCeEEEEec-CCEEEEEeCCCcEEEEeCCCC
Q psy9182 399 GIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEG------HEELVRCIRFD-AKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 399 ~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~------h~~~v~~~~~~-~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.|.++..+ ...|..|+. +-|.+||..+++....... +...|.++..| ...|..|+. +.|..||..+.
T Consensus 453 ~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~ 527 (795)
T 4a2l_A 453 NVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGL 527 (795)
T ss_dssp CEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETT
T ss_pred eeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCC
Confidence 68888875 344555665 4588999887765432211 23568888883 334555555 45888887543
No 234
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.87 E-value=5.2e-06 Score=74.97 Aligned_cols=167 Identities=7% Similarity=-0.010 Sum_probs=103.9
Q ss_pred ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC----CcccEEEEEe--cCCEEEEEeC-----------CCcEEE
Q psy9182 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG----HTGSVLCLQY--DERVIISGSS-----------DSTVRV 298 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~--~~~~l~~~~~-----------dg~i~v 298 (486)
..+++.+++++++ +. ++.|.+||..+++....... ....+..+.+ +|++.++... .+.|..
T Consensus 57 ~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~ 134 (297)
T 3g4e_A 57 SSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS 134 (297)
T ss_dssp EEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE
T ss_pred EEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEE
Confidence 3445667888544 44 56899999988776543332 1234667777 5675554422 133444
Q ss_pred EECCCCcEEEEecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECC--CCCcee--eEEeeecCcccEEEEEe--CCCE
Q psy9182 299 WDVNTGEMVNTLIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMV--SPNEIT--LRRVLVGHRAAVNVVDF--DEKY 369 (486)
Q Consensus 299 wd~~~~~~~~~~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~--~~~~~~--~~~~~~~~~~~v~~~~~--~~~~ 369 (486)
+|.. ++.. .+.........++|+++ .+ ++.+.++.|..||+. ++.... ..............+.+ +|++
T Consensus 135 ~d~~-g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l 212 (297)
T 3g4e_A 135 LFPD-HHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKL 212 (297)
T ss_dssp ECTT-SCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCE
T ss_pred EECC-CCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCE
Confidence 4443 3332 23333345677888754 44 455667899999973 443211 11112223345566666 6777
Q ss_pred EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC
Q psy9182 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406 (486)
Q Consensus 370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 406 (486)
.++....+.|..||..+++.+..+..+...+++++|.
T Consensus 213 wva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 213 WVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp EEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred EEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 7777778889999999999999998887788999885
No 235
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.85 E-value=2.3e-06 Score=84.63 Aligned_cols=226 Identities=14% Similarity=0.093 Sum_probs=141.7
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCCcc----cEEE--EEecC----C-EEEEEeC------CCcEEEEECCCCc
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVLC--LQYDE----R-VIISGSS------DSTVRVWDVNTGE 305 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~v~~--~~~~~----~-~l~~~~~------dg~i~vwd~~~~~ 305 (486)
.+..+++++.++.|..+|..+|+.+........ .+.+ +..++ + .+++++. +|.|..+|.++|+
T Consensus 116 ~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 116 YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 355677888899999999999998877654321 1111 11122 2 6666653 7899999999999
Q ss_pred EEEEecccCccE-----------------------------------------EEEEEc--CCeEEEEeC----------
Q psy9182 306 MVNTLIHHCEAV-----------------------------------------LHLRFS--NGMMVTCSK---------- 332 (486)
Q Consensus 306 ~~~~~~~~~~~i-----------------------------------------~~~~~~--~~~l~~~~~---------- 332 (486)
.+.........+ ..++++ .+.++++..
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 887654321100 112333 356776663
Q ss_pred ----------C----CcEEEEECCCCCceeeEEeeecC--------cccEEE-EE-eCCC---EEEEEeCCCcEEEEECC
Q psy9182 333 ----------D----RSIAVWDMVSPNEITLRRVLVGH--------RAAVNV-VD-FDEK---YIVSASGDRTIKVWNTS 385 (486)
Q Consensus 333 ----------d----g~i~i~d~~~~~~~~~~~~~~~~--------~~~v~~-~~-~~~~---~l~~~~~d~~i~iwd~~ 385 (486)
| +.|..+|..+++..-..+. ..| ..++.. .. .+|+ .++.++.+|.++++|.+
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~-~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 354 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQH-TPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRS 354 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEES-STTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeC-CCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECC
Confidence 2 5799999999986643322 222 122322 11 3564 78889999999999999
Q ss_pred CceEEEEEcCCcc--cEE-------------------------------------------EEEeC--CCEEEEEe----
Q psy9182 386 SCEFVRTLNGHKR--GIA-------------------------------------------CLQYR--DRLVVSGS---- 414 (486)
Q Consensus 386 ~~~~~~~~~~~~~--~v~-------------------------------------------~~~~~--~~~l~~~~---- 414 (486)
+|+.+..+..... ... .++++ ..++++..
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 9998876653320 000 11222 12222221
Q ss_pred -----------------------------CCCcEEEEECCCCeeeEEecCcccCe-EEEEecCCEEEEEeCCCcEEEEeC
Q psy9182 415 -----------------------------SDNTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAYDGKIKVWNL 464 (486)
Q Consensus 415 -----------------------------~dg~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~l~s~~~dg~v~iwdl 464 (486)
.+|.|..||+.+|+.+.......... ..+...+..++.++.||.|+.||.
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 36889999999999987775432211 123446788888999999999999
Q ss_pred CCCCC
Q psy9182 465 VAALD 469 (486)
Q Consensus 465 ~~~~~ 469 (486)
+++..
T Consensus 515 ~tG~~ 519 (582)
T 1flg_A 515 KSGKE 519 (582)
T ss_dssp TTCCE
T ss_pred CCCCE
Confidence 88763
No 236
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.83 E-value=1.8e-05 Score=82.03 Aligned_cols=222 Identities=12% Similarity=0.118 Sum_probs=142.0
Q ss_pred CCEEEEEecCCeEEEEECCCceeeEEEcC-------CcccEEEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEecc---
Q psy9182 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTG-------HTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLIH--- 312 (486)
Q Consensus 244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--- 312 (486)
...+.+|+.++-+..||..+++....... ....|.++..+ ...+..|+.+ -|.+||..+++.......
T Consensus 225 ~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~ 303 (795)
T 4a2l_A 225 PTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVE 303 (795)
T ss_dssp TTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTS
T ss_pred CCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCC
Confidence 34566677665699999887765443221 13568888874 4456666666 589999887765443211
Q ss_pred ----cCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEee---ecCcccEEEEEeC-CCEEEEEeCCCcEEEEE
Q psy9182 313 ----HCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVL---VGHRAAVNVVDFD-EKYIVSASGDRTIKVWN 383 (486)
Q Consensus 313 ----~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd 383 (486)
....|.++..+. +.+.+|+.++.|..|+............. .-....|.++..+ ...|..|+.++-|..||
T Consensus 304 ~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~ 383 (795)
T 4a2l_A 304 NGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYN 383 (795)
T ss_dssp TTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEEC
T ss_pred CCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEc
Confidence 235688888864 58889999899999987654321111000 0123468888874 34577788887899999
Q ss_pred CCCceEEEEEcC--------CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEec----CcccCeEEEEec-CC
Q psy9182 384 TSSCEFVRTLNG--------HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLE----GHEELVRCIRFD-AK 448 (486)
Q Consensus 384 ~~~~~~~~~~~~--------~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~----~h~~~v~~~~~~-~~ 448 (486)
..+++....... ....|.++..+ ++.|..|+.++-|..||.++++...... .+...|.++..| ..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 463 (795)
T 4a2l_A 384 PITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG 463 (795)
T ss_dssp TTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS
T ss_pred CCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC
Confidence 887654332211 23567888774 4547888888889999998776443322 134578888883 33
Q ss_pred EEEEEeCCCcEEEEeCCCC
Q psy9182 449 RIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 449 ~l~s~~~dg~v~iwdl~~~ 467 (486)
.|..|+.+ .|.+||..++
T Consensus 464 ~lwigt~~-Gl~~~~~~~~ 481 (795)
T 4a2l_A 464 NLWLGTLS-ALVRFNPEQR 481 (795)
T ss_dssp CEEEEESS-CEEEEETTTT
T ss_pred CEEEEecC-ceeEEeCCCC
Confidence 45555554 4888887654
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.80 E-value=4.1e-06 Score=72.20 Aligned_cols=186 Identities=13% Similarity=0.180 Sum_probs=126.9
Q ss_pred eeeEEEcCCccc--EEEEEe-cCCEEEEEeCCC--cEEEEECCCCcEEEEecccCcc-EEEEEEcCCeEEEEe-CCCcEE
Q psy9182 265 QCIKVLTGHTGS--VLCLQY-DERVIISGSSDS--TVRVWDVNTGEMVNTLIHHCEA-VLHLRFSNGMMVTCS-KDRSIA 337 (486)
Q Consensus 265 ~~~~~~~~~~~~--v~~~~~-~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~-i~~~~~~~~~l~~~~-~dg~i~ 337 (486)
+.+.++. |... ...+.+ ++.+..+.+.+| .|+++|+.+++.+..+...... -..+.+.++.++... .++.+.
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEec-CCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 3455553 4333 356777 455555556655 8999999999999888654332 244667777666655 588999
Q ss_pred EEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-----ccEEEEEe-CCCEEE
Q psy9182 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-----RGIACLQY-RDRLVV 411 (486)
Q Consensus 338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~-~~~~l~ 411 (486)
+||..+.+....... +. .-..++++++.|+.+..++.|.++|..+.+.+..+.... ..++.+.+ +|.+.+
T Consensus 111 v~D~~t~~~~~ti~~--~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lya 186 (262)
T 3nol_A 111 VWNIRNLRQVRSFNY--DG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFA 186 (262)
T ss_dssp EEETTTCCEEEEEEC--SS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred EEECccCcEEEEEEC--CC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEE
Confidence 999999886654332 11 224566788888777778889999999999888876422 22344555 455444
Q ss_pred EEeCCCcEEEEECCCCeeeEEecCc------------ccCeEEEEe--cCCEEEEEeC
Q psy9182 412 SGSSDNTIRLWDIECGACLRVLEGH------------EELVRCIRF--DAKRIVSGAY 455 (486)
Q Consensus 412 ~~~~dg~v~iwd~~~~~~~~~~~~h------------~~~v~~~~~--~~~~l~s~~~ 455 (486)
..-.++.|.+.|.++|+.+..+... ....+.|++ ++++|+..+.
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 4446889999999999999887542 134578999 5567776664
No 238
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.80 E-value=7.3e-06 Score=80.99 Aligned_cols=142 Identities=14% Similarity=0.083 Sum_probs=90.8
Q ss_pred cEEEEECCCCcEEEEeccc----------CccEE-EEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecC----
Q psy9182 295 TVRVWDVNTGEMVNTLIHH----------CEAVL-HLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH---- 356 (486)
Q Consensus 295 ~i~vwd~~~~~~~~~~~~~----------~~~i~-~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---- 356 (486)
.|..+|.++|+.+..++.. ..++. .....+ ..++.++.+|.++++|..+++.+.........
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 5999999999998877532 12222 111223 24677888999999999988765332211000
Q ss_pred ------cccE----------------------------EEEEeCCCEEEEEe----------------------------
Q psy9182 357 ------RAAV----------------------------NVVDFDEKYIVSAS---------------------------- 374 (486)
Q Consensus 357 ------~~~v----------------------------~~~~~~~~~l~~~~---------------------------- 374 (486)
..++ .++..+..++++..
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 0001 12223344554432
Q ss_pred ---------CCCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCc
Q psy9182 375 ---------GDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436 (486)
Q Consensus 375 ---------~d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h 436 (486)
.++.|..||+.+++.+.++....... ..+...+..++.++.||.|+.+|.++|+.+..+...
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 35789999999999887776332211 223445778888999999999999999999888644
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.79 E-value=9.6e-06 Score=70.80 Aligned_cols=190 Identities=7% Similarity=-0.011 Sum_probs=128.5
Q ss_pred eEEEEeCCCEEEEEe-c--CCeEEEEECCCceeeEEEcCCc-ccEEEEEecCCEEEEEe-CCCcEEEEECCCCcEEEEec
Q psy9182 237 VYCLQYDDHKIVSGL-R--DNTIKVWDRVSLQCIKVLTGHT-GSVLCLQYDERVIISGS-SDSTVRVWDVNTGEMVNTLI 311 (486)
Q Consensus 237 v~~~~~~~~~l~~~~-~--dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~ 311 (486)
-+.+++++ .|+.++ . ++.|.++|..+++.+..+.... .....++++++.++.+. .++.+.++|..+.+.+.++.
T Consensus 25 Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~ 103 (266)
T 2iwa_A 25 GLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFT 103 (266)
T ss_dssp EEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEE
T ss_pred cEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEE
Confidence 34556665 555443 3 5799999999999998875322 22345677666665555 57899999999999998885
Q ss_pred ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeec--CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCce
Q psy9182 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG--HRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCE 388 (486)
Q Consensus 312 ~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~ 388 (486)
.....-..++..++.++++..++.|.++|..+.+.......-.. .-.....+.+ ++...+....++.|.+.|..+++
T Consensus 104 ~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 104 HQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp CCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCC
T ss_pred CCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCc
Confidence 43122245777777777777889999999988776544333221 1112455666 55444444467899999999999
Q ss_pred EEEEEcCCc-------------ccEEEEEeC--C-CEEEEEeCCCcEEEEECCCC
Q psy9182 389 FVRTLNGHK-------------RGIACLQYR--D-RLVVSGSSDNTIRLWDIECG 427 (486)
Q Consensus 389 ~~~~~~~~~-------------~~v~~~~~~--~-~~l~~~~~dg~v~iwd~~~~ 427 (486)
.+..+.... .....++++ + .+++++...+.|.+.++...
T Consensus 184 V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 184 LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 998886421 244677775 3 46667777888888887543
No 240
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.76 E-value=5.5e-07 Score=83.27 Aligned_cols=193 Identities=11% Similarity=0.061 Sum_probs=112.0
Q ss_pred CCeEEEEECCCceeeEEEcCC------cccEEEEEec--CCEEE-EEe---CCCcEEEEECCCCcEEEEecccCccE---
Q psy9182 253 DNTIKVWDRVSLQCIKVLTGH------TGSVLCLQYD--ERVII-SGS---SDSTVRVWDVNTGEMVNTLIHHCEAV--- 317 (486)
Q Consensus 253 dg~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~--~~~l~-~~~---~dg~i~vwd~~~~~~~~~~~~~~~~i--- 317 (486)
++.|.+||..+++.+..+... ...+..+.++ +..++ +-. .++.|.+||+.+++..+.+..|....
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 578999999988877766532 2234666664 44554 443 57889999999888777665432110
Q ss_pred EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCC-cEEEEECC---Cce---
Q psy9182 318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDR-TIKVWNTS---SCE--- 388 (486)
Q Consensus 318 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~-~i~iwd~~---~~~--- 388 (486)
..+.+.+..+.+...++.+..|. ..+..+++ +++.|+.+..++ .+..++.. .+.
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~-----------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPH-----------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCC-----------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred cceeECCEEEEeccCCCceecee-----------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence 11222333444555666655442 12334555 788888877665 45555431 110
Q ss_pred --EEE--EEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEEEe--cCCEEEEEeCCCcE
Q psy9182 389 --FVR--TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF--DAKRIVSGAYDGKI 459 (486)
Q Consensus 389 --~~~--~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~s~~~dg~v 459 (486)
... ...++......+++ +|+++++...++.|.+||.++++....... +...+.++++ ++.++++.+..+.+
T Consensus 235 ~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 235 AELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp HHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred hhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 000 11122222233444 588888888899999999866765443332 2456889999 66677776655444
Q ss_pred EEE
Q psy9182 460 KVW 462 (486)
Q Consensus 460 ~iw 462 (486)
.+|
T Consensus 315 ~~f 317 (343)
T 2qe8_A 315 APL 317 (343)
T ss_dssp GGG
T ss_pred ccc
Confidence 333
No 241
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.74 E-value=2.7e-06 Score=77.19 Aligned_cols=209 Identities=11% Similarity=0.032 Sum_probs=127.8
Q ss_pred EEEEeCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc-
Q psy9182 238 YCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH- 313 (486)
Q Consensus 238 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~- 313 (486)
..+.++++ +++++..++.|..|+. +++ ...+..+...+..+.+ +++++++...++.|..||.. ++........
T Consensus 50 p~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~ 126 (305)
T 3dr2_A 50 PAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYA 126 (305)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEET
T ss_pred CeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccC
Confidence 45677887 5677778899999997 444 3444445566778877 57766655556789999986 5543222111
Q ss_pred ---CccEEEEEEcCC-eEEE-----EeC-------------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCE
Q psy9182 314 ---CEAVLHLRFSNG-MMVT-----CSK-------------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKY 369 (486)
Q Consensus 314 ---~~~i~~~~~~~~-~l~~-----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~ 369 (486)
...+..+.++++ .++. |.. .+.|..||..+++..... .......+.+ +++.
T Consensus 127 ~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-----~~~~p~gl~~spdg~~ 201 (305)
T 3dr2_A 127 GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-----DLDHPNGLAFSPDEQT 201 (305)
T ss_dssp TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-----EESSEEEEEECTTSSE
T ss_pred CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-----cCCCCcceEEcCCCCE
Confidence 123456777643 4444 321 256777887666543221 2223445555 7887
Q ss_pred EEEEeCC------CcEEEEECCCceEE--EEE-cCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCccc
Q psy9182 370 IVSASGD------RTIKVWNTSSCEFV--RTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 438 (486)
Q Consensus 370 l~~~~~d------~~i~iwd~~~~~~~--~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~ 438 (486)
|+.+... +.|.+||+..+... ..+ .........+.+ +|+ |.+++.+ .|.+|+. .++.+..+..+.
T Consensus 202 lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~-~g~~~~~~~~~~- 277 (305)
T 3dr2_A 202 LYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDS-DGQLLGHIPTPG- 277 (305)
T ss_dssp EEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECT-TSCEEEEEECSS-
T ss_pred EEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECC-CCCEEEEEECCC-
Confidence 7777665 68999998765411 111 111222333444 466 4444444 4999998 477777776655
Q ss_pred CeEEEEe--cCCEEEEEeCCCc
Q psy9182 439 LVRCIRF--DAKRIVSGAYDGK 458 (486)
Q Consensus 439 ~v~~~~~--~~~~l~s~~~dg~ 458 (486)
.+.+++| +++.|..++.++.
T Consensus 278 ~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 278 TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp CCCEEEECTTSCEEEEEETTEE
T ss_pred ceeEEEEeCCCCEEEEEcCCeE
Confidence 5888999 7778888877653
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.74 E-value=1e-05 Score=69.78 Aligned_cols=174 Identities=10% Similarity=0.068 Sum_probs=119.3
Q ss_pred EEEeCCCEEEEEecCC--eEEEEECCCceeeEEEcCCcccE-EEEEecCCEEEEEe-CCCcEEEEECCCCcEEEEecccC
Q psy9182 239 CLQYDDHKIVSGLRDN--TIKVWDRVSLQCIKVLTGHTGSV-LCLQYDERVIISGS-SDSTVRVWDVNTGEMVNTLIHHC 314 (486)
Q Consensus 239 ~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~ 314 (486)
.++ ++.++.+.+.+| .|+++|+.+++.+..+....... ..+.++++.|.... .++.+.+||..+.+.+.++....
T Consensus 49 ~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~ 127 (262)
T 3nol_A 49 FYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG 127 (262)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred EEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC
Confidence 344 555556666666 89999999999998887543322 44677666666655 47899999999999999887543
Q ss_pred ccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeee-cCc-ccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182 315 EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV-GHR-AAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVR 391 (486)
Q Consensus 315 ~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~-~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~ 391 (486)
. -..+++.++.++.+..++.|.++|..+.+......... +.. ..++.+.+ +|+..+..-.++.|.+.|.++++.+.
T Consensus 128 e-G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 128 E-GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp C-CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred C-ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEE
Confidence 2 24566677777777778889999999887665444322 111 23445666 66555555468899999999999998
Q ss_pred EEcCC------------cccEEEEEeC--CCEEEEEe
Q psy9182 392 TLNGH------------KRGIACLQYR--DRLVVSGS 414 (486)
Q Consensus 392 ~~~~~------------~~~v~~~~~~--~~~l~~~~ 414 (486)
.+... ....+.++++ ++.|++.+
T Consensus 207 ~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 207 IIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 88642 1244778885 45555444
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.73 E-value=1.1e-05 Score=69.46 Aligned_cols=174 Identities=11% Similarity=0.073 Sum_probs=119.5
Q ss_pred EEEeCC-CEEEEEecCCeEEEEECCCceeeEEEcCCccc-EEEEEecCCEEEE-EeCCCcEEEEECCCCcEEEEecccCc
Q psy9182 239 CLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-VLCLQYDERVIIS-GSSDSTVRVWDVNTGEMVNTLIHHCE 315 (486)
Q Consensus 239 ~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~ 315 (486)
.+.+++ .++.+.+.+|.|+++|+.+++.+..+ -.... -..++++++.|.. .-.++.+.+||..+.+.+.++.....
T Consensus 59 GL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e 137 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE 137 (268)
T ss_dssp EEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC
T ss_pred eEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc
Confidence 344444 45556677789999999999998877 32221 2446775554444 44678999999999999999875433
Q ss_pred cEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecC--cccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH--RAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRT 392 (486)
Q Consensus 316 ~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~ 392 (486)
-..+++.++.|+++..++.|.++|..+.+........... -..++.+.+ +|+..+..-.+..|.+.|.++++.+..
T Consensus 138 -GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 138 -GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp -CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEE
T ss_pred -eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEE
Confidence 3566677888888888999999999988766544432211 123456667 665554444678999999999999888
Q ss_pred EcCC-------------cccEEEEEeC---CCEEEEEe
Q psy9182 393 LNGH-------------KRGIACLQYR---DRLVVSGS 414 (486)
Q Consensus 393 ~~~~-------------~~~v~~~~~~---~~~l~~~~ 414 (486)
+... ....+.++++ ++++++|-
T Consensus 217 Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 217 IDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 7632 1245788886 35555553
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.73 E-value=1.3e-05 Score=69.94 Aligned_cols=199 Identities=15% Similarity=0.116 Sum_probs=136.3
Q ss_pred eeeEEEcCCcc--cEEEEEecC-CEEEEEeC---CCcEEEEECCCCcEEEEecccC-ccEEEEEEcCCeEEEEe-CCCcE
Q psy9182 265 QCIKVLTGHTG--SVLCLQYDE-RVIISGSS---DSTVRVWDVNTGEMVNTLIHHC-EAVLHLRFSNGMMVTCS-KDRSI 336 (486)
Q Consensus 265 ~~~~~~~~~~~--~v~~~~~~~-~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~-~~i~~~~~~~~~l~~~~-~dg~i 336 (486)
+.+.++. |.. ....+.+++ ..|+.++. ++.|.++|+.+++.+..+.... .....+.+.++.++.+. .++.+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEE
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEE
Confidence 4455554 332 346777743 45555542 5799999999999998875322 23346777777666555 57899
Q ss_pred EEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc--c---cEEEEEe-CCCEE
Q psy9182 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK--R---GIACLQY-RDRLV 410 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~---~v~~~~~-~~~~l 410 (486)
.++|..+.+....... + ...-..+++|++.++++..++.|.++|.++.+.+..+.-.. . ....+.+ ++.+.
T Consensus 89 ~viD~~t~~v~~~i~~--g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~ly 165 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTH--Q-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVW 165 (266)
T ss_dssp EEEETTTTEEEEEEEC--C-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEE
T ss_pred EEEECCCCcEEEEEEC--C-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEE
Confidence 9999988766543322 2 12224577788877777788999999999999888876322 1 2445555 45444
Q ss_pred EEEeCCCcEEEEECCCCeeeEEecCcc-------------cCeEEEEe--cCCE-EEEEeCCCcEEEEeCCCC
Q psy9182 411 VSGSSDNTIRLWDIECGACLRVLEGHE-------------ELVRCIRF--DAKR-IVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~-------------~~v~~~~~--~~~~-l~s~~~dg~v~iwdl~~~ 467 (486)
+....++.|.+.|.++++.+..+.... ...+.|++ ++++ ++++...+.|.+-++...
T Consensus 166 vn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 166 ANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 444467899999999999998886421 35589999 4554 666667889999998765
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.72 E-value=4.3e-06 Score=72.10 Aligned_cols=184 Identities=13% Similarity=0.127 Sum_probs=125.4
Q ss_pred eeeEEEcCCcc--cEEEEEecC-CEEEEEeCCCcEEEEECCCCcEEEEecccCc-cEEEEEEcCCeEEEE-eCCCcEEEE
Q psy9182 265 QCIKVLTGHTG--SVLCLQYDE-RVIISGSSDSTVRVWDVNTGEMVNTLIHHCE-AVLHLRFSNGMMVTC-SKDRSIAVW 339 (486)
Q Consensus 265 ~~~~~~~~~~~--~v~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~i~~~~~~~~~l~~~-~~dg~i~i~ 339 (486)
+.+.++. |.. ....+.+++ .+..+.+.+|.|+++|+++++.+..+ .... .-..+.+.++.++.. -.++.+.+|
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEE
T ss_pred EEEEEEc-CCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEE
Confidence 3445553 333 236778854 45556677789999999999988877 3222 224467777655544 468899999
Q ss_pred ECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc--c---cEEEEEe-CCCEEEEE
Q psy9182 340 DMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK--R---GIACLQY-RDRLVVSG 413 (486)
Q Consensus 340 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~---~v~~~~~-~~~~l~~~ 413 (486)
|..+.+.+..... . ..-..++++++.|+.+..++.|.++|..+.+.+.++.... . .++.+.+ +|.+.+..
T Consensus 122 D~~Tl~~~~ti~~--~--~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv 197 (268)
T 3nok_A 122 SGMPPQRERTTRY--S--GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI 197 (268)
T ss_dssp ETTTTEEEEEEEC--S--SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred ECCcCcEEEEEeC--C--CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE
Confidence 9998876644332 1 2224666888888888889999999999999988876422 2 3455666 45544444
Q ss_pred eCCCcEEEEECCCCeeeEEecCc-------------ccCeEEEEec--CCEEEEEe
Q psy9182 414 SSDNTIRLWDIECGACLRVLEGH-------------EELVRCIRFD--AKRIVSGA 454 (486)
Q Consensus 414 ~~dg~v~iwd~~~~~~~~~~~~h-------------~~~v~~~~~~--~~~l~s~~ 454 (486)
-.++.|.+.|.++|+.+..+... ....+.|+++ +++|+..+
T Consensus 198 w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 198 WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 46889999999999998887532 1356889993 45555554
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.71 E-value=2.1e-06 Score=79.36 Aligned_cols=223 Identities=8% Similarity=-0.029 Sum_probs=141.8
Q ss_pred eEEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCC---------cccEEEEEecCCEEEEEeC--CCc
Q psy9182 237 VYCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGH---------TGSVLCLQYDERVIISGSS--DST 295 (486)
Q Consensus 237 v~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~~~l~~~~~--dg~ 295 (486)
-..+++++++++++. .++.|.+||..+++.+..+... ...-..++.|+++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 478899999988886 3688999999999999888633 2223556668998888864 457
Q ss_pred EEE--EECCCCcEEEEecccCccEEEEEEcC-CeEEEEeCCCcEEEEECCC-----CCceeeE-EeeecCcccEEEEEeC
Q psy9182 296 VRV--WDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVS-----PNEITLR-RVLVGHRAAVNVVDFD 366 (486)
Q Consensus 296 i~v--wd~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~-----~~~~~~~-~~~~~~~~~v~~~~~~ 366 (486)
+.+ +|..+ +..+.... . ..+...+ ..+++.+.||.+.+.|+.+ ++..... ....-...+. . ..+
T Consensus 149 v~V~~iD~~t---v~~i~v~~-~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~ 221 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSAS-C-FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANY 221 (368)
T ss_dssp EEEEETTTEE---EEEEECSS-C-CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETT
T ss_pred EEEEEEchhh---ceEEECCC-c-eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-c-ccc
Confidence 888 99877 44443211 1 1122222 3556667888888888876 2211000 0000111222 2 445
Q ss_pred CCEEEEEeCCCcEEEEECCCce--EEEEEcC------------CcccEEEEEeCCCEEEEEeC---------CCcEEEEE
Q psy9182 367 EKYIVSASGDRTIKVWNTSSCE--FVRTLNG------------HKRGIACLQYRDRLVVSGSS---------DNTIRLWD 423 (486)
Q Consensus 367 ~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~------------~~~~v~~~~~~~~~l~~~~~---------dg~v~iwd 423 (486)
+..++..+. +.+.+.|..+.. .+..+.. .......+..+++.++++.. ++.+.++|
T Consensus 222 ~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD 300 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVT 300 (368)
T ss_dssp TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEE
T ss_pred CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEE
Confidence 666555556 899999986532 3332221 11112456667777776543 23566999
Q ss_pred CCCCeeeEEecCcccCeEEEEe--cCCE-EEEEe-CCCcEEEEeCCCCC
Q psy9182 424 IECGACLRVLEGHEELVRCIRF--DAKR-IVSGA-YDGKIKVWNLVAAL 468 (486)
Q Consensus 424 ~~~~~~~~~~~~h~~~v~~~~~--~~~~-l~s~~-~dg~v~iwdl~~~~ 468 (486)
+.+++.+..+.... ....|+| |+++ +++.. .++.|.++|+.+..
T Consensus 301 ~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 301 ASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp SSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 99999988886543 5778888 7774 66666 59999999998764
No 247
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.70 E-value=6.5e-05 Score=77.70 Aligned_cols=232 Identities=14% Similarity=0.065 Sum_probs=143.2
Q ss_pred cceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEc--------------CCcccEEEEEec-CCEEEEEeCCCcEEE
Q psy9182 235 KGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLT--------------GHTGSVLCLQYD-ERVIISGSSDSTVRV 298 (486)
Q Consensus 235 ~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------~~~~~v~~~~~~-~~~l~~~~~dg~i~v 298 (486)
..+.++..+ ...+..|+..+-|.++|..+++...... .....|.++..| ...|..|+.++-|..
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~ 337 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINF 337 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEE
Confidence 345555553 4567778875678899987765432211 123568888774 346777887777999
Q ss_pred EECCCCcEEEEec---------ccCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC-C
Q psy9182 299 WDVNTGEMVNTLI---------HHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-E 367 (486)
Q Consensus 299 wd~~~~~~~~~~~---------~~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~ 367 (486)
++..++....... .....|.++...+ +.+.+|+.++.|..||..++...............|.++..+ .
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~ 417 (781)
T 3v9f_A 338 ISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSE 417 (781)
T ss_dssp ECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTT
T ss_pred eCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCC
Confidence 9987655433211 1235688888875 688899888889999976532211100011234568888774 4
Q ss_pred CEEEEEeCCCcEEEEECCCceEEEEEc--CCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecCc-----ccC
Q psy9182 368 KYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGH-----EEL 439 (486)
Q Consensus 368 ~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-----~~~ 439 (486)
..|..|+.++-|..+|..+++...... .....|.++..+ ...|..|+. +-|..||..+++........ ...
T Consensus 418 g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (781)
T 3v9f_A 418 GNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENF 496 (781)
T ss_dssp SCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSC
T ss_pred CCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccce
Confidence 556667777779999988766432221 234578888886 456777777 56889998876654433222 357
Q ss_pred eEEEEec-CCEEEEEeCCCcEEEEeCCCC
Q psy9182 440 VRCIRFD-AKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 440 v~~~~~~-~~~l~s~~~dg~v~iwdl~~~ 467 (486)
|.++..| ...|..|+.++-|..||..+.
T Consensus 497 i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 497 VRSIAQDSEGRFWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp EEEEEECTTCCEEEEESSSCEEEECTTCC
T ss_pred eEEEEEcCCCCEEEEEcCCCEEEEeCCCC
Confidence 8888883 344566666445777886543
No 248
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.68 E-value=4.4e-06 Score=75.78 Aligned_cols=118 Identities=9% Similarity=0.056 Sum_probs=70.7
Q ss_pred CcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCC------CcEEEEECCCCCceeeEEee-ecCcccEEEEE
Q psy9182 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKD------RSIAVWDMVSPNEITLRRVL-VGHRAAVNVVD 364 (486)
Q Consensus 294 g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~d------g~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~ 364 (486)
+.|..+|..+++..... .......++|+++ .++++... +.|..||+.... +.....+ .........+.
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~ 245 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFC 245 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEE
T ss_pred CeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEE
Confidence 46777887666654333 3345667888865 56666654 789999987653 2111111 11122223344
Q ss_pred e--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCc
Q psy9182 365 F--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT 418 (486)
Q Consensus 365 ~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~ 418 (486)
+ +|+ +.+++.+ .|.+||. .++.+..+..+. .+..+.+ +++.|+.++.++.
T Consensus 246 ~d~~G~-lwv~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 246 VDRGGW-LWSSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp ECTTSC-EEECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred ECCCCC-EEEecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 4 677 4444444 4999998 577777776555 4666676 5677887776543
No 249
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.66 E-value=5.3e-05 Score=69.30 Aligned_cols=169 Identities=8% Similarity=0.006 Sum_probs=97.8
Q ss_pred EEeCCCEEEEEecCCeEEEEECCCceeeEEEcC----CcccEEEEEe--cCCEEEEEeC------CCcEEEEECCCCcEE
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG----HTGSVLCLQY--DERVIISGSS------DSTVRVWDVNTGEMV 307 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~--~~~~l~~~~~------dg~i~vwd~~~~~~~ 307 (486)
+.++++++++ +. ..|.+||..+++....... ....+.++.+ +|+++++... .+.|..+| +++..
T Consensus 97 ~~~dg~l~v~-~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~ 172 (326)
T 2ghs_A 97 KISDSKQLIA-SD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT 172 (326)
T ss_dssp EEETTEEEEE-ET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE
T ss_pred EeCCCeEEEE-EC-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE
Confidence 3455555443 33 3477888777665433221 1234667777 5665554432 24566666 45443
Q ss_pred EEecccCccEEEEEEcCC--eEEE-EeCCCcEEEEECC--CC-Cce--eeEEeeecCcccEEEEEe--CCCEEEEEeCCC
Q psy9182 308 NTLIHHCEAVLHLRFSNG--MMVT-CSKDRSIAVWDMV--SP-NEI--TLRRVLVGHRAAVNVVDF--DEKYIVSASGDR 377 (486)
Q Consensus 308 ~~~~~~~~~i~~~~~~~~--~l~~-~~~dg~i~i~d~~--~~-~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~ 377 (486)
.+.........++|+++ .++. .+.++.|.+||+. ++ ... ...............+.+ +|++.++...++
T Consensus 173 -~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~ 251 (326)
T 2ghs_A 173 -KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG 251 (326)
T ss_dssp -EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT
T ss_pred -EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC
Confidence 23223345667888754 4544 4557899999986 44 211 111112222344556666 677777666678
Q ss_pred cEEEEECCCceEEEEEcCCcccEEEEEeC---CCEEEEEe
Q psy9182 378 TIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGS 414 (486)
Q Consensus 378 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~ 414 (486)
.|..||. +++.+..+..+...+.++++. ++.|++++
T Consensus 252 ~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 252 AVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 8999998 677777887777778888874 34554444
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.64 E-value=3.3e-05 Score=66.00 Aligned_cols=186 Identities=13% Similarity=0.138 Sum_probs=126.5
Q ss_pred eeeEEEcCCcc--cEEEEEecCCEEEEE-eCC--CcEEEEECCCCcEEEEecccCcc-EEEEEEcCCeEEEE-eCCCcEE
Q psy9182 265 QCIKVLTGHTG--SVLCLQYDERVIISG-SSD--STVRVWDVNTGEMVNTLIHHCEA-VLHLRFSNGMMVTC-SKDRSIA 337 (486)
Q Consensus 265 ~~~~~~~~~~~--~v~~~~~~~~~l~~~-~~d--g~i~vwd~~~~~~~~~~~~~~~~-i~~~~~~~~~l~~~-~~dg~i~ 337 (486)
+.+.++. |.. ....+.+++..|..+ +.+ ..|+.+|+.+++.+..+...... -..+.+.++.++.. -.++.+.
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEcC-CCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence 4455553 443 346788866655554 443 48999999999999887654332 24456667755554 4688999
Q ss_pred EEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-----ccEEEEEeC-CCEEE
Q psy9182 338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-----RGIACLQYR-DRLVV 411 (486)
Q Consensus 338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~-~~~l~ 411 (486)
+||..+.+....... + ..-..++.++..|+.+..++.|.++|..+.+.+.++.... ..++.+.+. |.+.+
T Consensus 89 v~D~~tl~~~~ti~~--~--~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lya 164 (243)
T 3mbr_X 89 VYDLATLTPRARFRY--P--GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLA 164 (243)
T ss_dssp EEETTTTEEEEEEEC--S--SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred EEECCcCcEEEEEeC--C--CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEE
Confidence 999988876543332 1 1224667788877777788999999999999888877432 234556664 55444
Q ss_pred EEeCCCcEEEEECCCCeeeEEecCc-------------ccCeEEEEe--cCCEEEEEeC
Q psy9182 412 SGSSDNTIRLWDIECGACLRVLEGH-------------EELVRCIRF--DAKRIVSGAY 455 (486)
Q Consensus 412 ~~~~dg~v~iwd~~~~~~~~~~~~h-------------~~~v~~~~~--~~~~l~s~~~ 455 (486)
..-.+..|.+.|.++|+.+..+... ....+.|++ ++++|...+.
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4446889999999999999887522 135678999 4566666664
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.63 E-value=4.5e-05 Score=65.17 Aligned_cols=175 Identities=11% Similarity=0.049 Sum_probs=118.1
Q ss_pred EEEEeCCCEEEEE-ecC--CeEEEEECCCceeeEEEcCCcccE-EEEEecCCEEEEE-eCCCcEEEEECCCCcEEEEecc
Q psy9182 238 YCLQYDDHKIVSG-LRD--NTIKVWDRVSLQCIKVLTGHTGSV-LCLQYDERVIISG-SSDSTVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 238 ~~~~~~~~~l~~~-~~d--g~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~ 312 (486)
.-+.+++..|..+ +.+ ..|+.+|+.+++.+..+....... ..+..+++.|... -.++.+.+||..+.+.+.++..
T Consensus 24 qGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~ 103 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRY 103 (243)
T ss_dssp EEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEEC
T ss_pred ccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeC
Confidence 3445555555544 443 489999999999998876443322 4456655555544 4578999999999999999876
Q ss_pred cCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecC--cccEEEEEe-CCCEEEEEeCCCcEEEEECCCceE
Q psy9182 313 HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH--RAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEF 389 (486)
Q Consensus 313 ~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 389 (486)
.... ..++..++.|+++..++.|.++|..+.+........... -..++.+.+ +|+..+..-.+..|.+.|.++++.
T Consensus 104 ~~~G-wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 104 PGEG-WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp SSCC-CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBE
T ss_pred CCCc-eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCE
Confidence 4433 466677777888878999999999988766544332211 123456666 565555554678999999999999
Q ss_pred EEEEcCC------------c-ccEEEEEeC--CC-EEEEE
Q psy9182 390 VRTLNGH------------K-RGIACLQYR--DR-LVVSG 413 (486)
Q Consensus 390 ~~~~~~~------------~-~~v~~~~~~--~~-~l~~~ 413 (486)
+..+... . ...+.++++ ++ ++++|
T Consensus 183 ~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 183 VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 9887622 1 245778885 34 44444
No 252
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.62 E-value=9.4e-05 Score=76.47 Aligned_cols=231 Identities=10% Similarity=-0.010 Sum_probs=141.6
Q ss_pred cceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEc---------CCcccEEEEEecC-CEEEEEeCCCcEEEEECCC
Q psy9182 235 KGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLT---------GHTGSVLCLQYDE-RVIISGSSDSTVRVWDVNT 303 (486)
Q Consensus 235 ~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------~~~~~v~~~~~~~-~~l~~~~~dg~i~vwd~~~ 303 (486)
..+.++..| ...|.+|+.++-|..++..+........ .....|.++..+. ..|..|+.++-|..||..+
T Consensus 313 ~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~ 392 (781)
T 3v9f_A 313 ASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGK 392 (781)
T ss_dssp SCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTE
T ss_pred CeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCC
Confidence 345555554 3457788878889999877654332211 1234688888853 5677788667799999875
Q ss_pred CcEEEEe---cccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC-CCEEEEEeCCCc
Q psy9182 304 GEMVNTL---IHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-EKYIVSASGDRT 378 (486)
Q Consensus 304 ~~~~~~~---~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~ 378 (486)
+...... ......|.++... ++.+.+|+.++.+..+|..+++... ..........|.++..+ ...+..|+. +-
T Consensus 393 ~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~v~~i~~d~~g~lwigt~-~G 470 (781)
T 3v9f_A 393 RVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQI-IELEKNELLDVRVFYEDKNKKIWIGTH-AG 470 (781)
T ss_dssp EEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEE-CCSTTTCCCCEEEEEECTTSEEEEEET-TE
T ss_pred CeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEE-eccCCCCCCeEEEEEECCCCCEEEEEC-Cc
Confidence 5432211 1234568888876 5688889888889999987653211 11001134567888774 456666766 56
Q ss_pred EEEEECCCceEEEEEcCC-----cccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeEEEEec-CC
Q psy9182 379 IKVWNTSSCEFVRTLNGH-----KRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRCIRFD-AK 448 (486)
Q Consensus 379 i~iwd~~~~~~~~~~~~~-----~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~~~-~~ 448 (486)
|..+|..+++........ ...|.++..+ ...|..|+.++-|..||..+++....... ....|.++..| ..
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g 550 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKG 550 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTS
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCC
Confidence 899998876654333222 3568888775 34566677655578899876654332211 13468888883 33
Q ss_pred EEEEEeCCCcEEEEeCCCC
Q psy9182 449 RIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 449 ~l~s~~~dg~v~iwdl~~~ 467 (486)
.|..++.+|.|..||..+.
T Consensus 551 ~lWi~T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 551 QMWLATGEGLVCFPSARNF 569 (781)
T ss_dssp CEEEEETTEEEEESCTTTC
T ss_pred CEEEEECCCceEEECCCCC
Confidence 4555555665488887654
No 253
>2p64_A F-BOX/WD repeat protein 1A; right handed super-helical bundle, ligase; 2.50A {Homo sapiens}
Probab=98.42 E-value=1.5e-07 Score=56.39 Aligned_cols=51 Identities=69% Similarity=1.357 Sum_probs=46.8
Q ss_pred CccchhhhhHHHHHhccCChhhHHHHHHHHHHhhccCCchhhhhhhccccc
Q psy9182 54 APQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQ 104 (486)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (486)
.+.+..+.+.+++.|.+|++..|.+++.+++.++|++++++++.+++|+++
T Consensus 2 ~~~y~~e~~~cl~~f~~Wse~eQvdfv~~L~~rm~hyQ~g~In~~L~PmLq 52 (52)
T 2p64_A 2 AASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQ 52 (52)
T ss_dssp CCHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTSCHHHHHHHHHHHGGGTC
T ss_pred cchHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhHHHHHHHHhhcccccC
Confidence 345778889999999999999999999999999999999999999999864
No 254
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.35 E-value=0.00047 Score=64.35 Aligned_cols=161 Identities=14% Similarity=0.177 Sum_probs=100.0
Q ss_pred CCeEEEEECCCceeeEEEcCCccc---EEEE--EecCCEEEEEe-------------------CCCcEEEEECCCCcEEE
Q psy9182 253 DNTIKVWDRVSLQCIKVLTGHTGS---VLCL--QYDERVIISGS-------------------SDSTVRVWDVNTGEMVN 308 (486)
Q Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~---v~~~--~~~~~~l~~~~-------------------~dg~i~vwd~~~~~~~~ 308 (486)
.|.|.++|..+++.+..+...... -..+ ..+++.+++.. .+.+|.+||+.+++.+.
T Consensus 163 ~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~ 242 (462)
T 2ece_A 163 PGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH 242 (462)
T ss_dssp CCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee
Confidence 378999999999999888632222 1234 44778888774 36899999999998888
Q ss_pred EecccC--ccEEEEEE--cCC--eEEEEe------CCCcEEEEECCCCCceeeEEee--ecC----------------cc
Q psy9182 309 TLIHHC--EAVLHLRF--SNG--MMVTCS------KDRSIAVWDMVSPNEITLRRVL--VGH----------------RA 358 (486)
Q Consensus 309 ~~~~~~--~~i~~~~~--~~~--~l~~~~------~dg~i~i~d~~~~~~~~~~~~~--~~~----------------~~ 358 (486)
++.... .....+.| +++ ++++++ .++.|.+|....+. ....+.. ... ..
T Consensus 243 tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~ 321 (462)
T 2ece_A 243 SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPP 321 (462)
T ss_dssp EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCC
Confidence 876531 23445655 654 455444 56788877665432 2111111 000 12
Q ss_pred cEEE--EEeCCCEEEEEeC-CCcEEEEECC---CceEEEEEcCC----------------cccEEEEEeCCCEEEEEe
Q psy9182 359 AVNV--VDFDEKYIVSASG-DRTIKVWNTS---SCEFVRTLNGH----------------KRGIACLQYRDRLVVSGS 414 (486)
Q Consensus 359 ~v~~--~~~~~~~l~~~~~-d~~i~iwd~~---~~~~~~~~~~~----------------~~~v~~~~~~~~~l~~~~ 414 (486)
.... ++.|+++|+++.. .+.|.+||+. +.+.+..+... ...-..++.+|++|+++.
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 2333 4448998888764 6889999985 34556655432 112345556799888887
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.33 E-value=0.0014 Score=57.80 Aligned_cols=217 Identities=10% Similarity=0.035 Sum_probs=124.6
Q ss_pred EEEEEecCCeEEEEECCCcee-----eEEEcCCcccEEEEEec--CCEEEEE-eCCCcEEEEECCCCcEEEEecccCccE
Q psy9182 246 KIVSGLRDNTIKVWDRVSLQC-----IKVLTGHTGSVLCLQYD--ERVIISG-SSDSTVRVWDVNTGEMVNTLIHHCEAV 317 (486)
Q Consensus 246 ~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~v~~~~~~--~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~i 317 (486)
+|+.+.. +.|+.+++..... ...+......+..++++ ++.|+.+ ..++.|..+|...+.....+.......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 3444443 4688887765432 11122122345677773 4555544 456899999997665443333333466
Q ss_pred EEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC---CCcEEEEECCCceE
Q psy9182 318 LHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG---DRTIKVWNTSSCEF 389 (486)
Q Consensus 318 ~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~iwd~~~~~~ 389 (486)
..+++++ +.++.+ ...+.|.++++....... ...........+.+ ++..|+.+.. .+.|..+++....
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~---~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~- 157 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV---LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN- 157 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE---EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-
Confidence 7888864 455544 456789999986543221 11111234456666 4566665554 3688888876432
Q ss_pred EEEEc-CCcccEEEEEeC--CCEE-EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEe-CCCcEEEEeC
Q psy9182 390 VRTLN-GHKRGIACLQYR--DRLV-VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGA-YDGKIKVWNL 464 (486)
Q Consensus 390 ~~~~~-~~~~~v~~~~~~--~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~-~dg~v~iwdl 464 (486)
...+. ........++++ +..| ++-...+.|.++|.........+.. ......++.++..|+.+. .++.|..+|.
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 23322 222345666664 5555 4455668999999975444333332 233467778777766665 4588999998
Q ss_pred CCCC
Q psy9182 465 VAAL 468 (486)
Q Consensus 465 ~~~~ 468 (486)
.++.
T Consensus 237 ~~g~ 240 (267)
T 1npe_A 237 AISK 240 (267)
T ss_dssp TTTE
T ss_pred CCCC
Confidence 7654
No 256
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.29 E-value=0.00061 Score=63.58 Aligned_cols=209 Identities=13% Similarity=0.161 Sum_probs=125.0
Q ss_pred CCCEE-EEEecCCeEEEEECCCc----eeeEEEc-------CCcccEEEEE--ecCCEEEEEeCC------CcEEEEECC
Q psy9182 243 DDHKI-VSGLRDNTIKVWDRVSL----QCIKVLT-------GHTGSVLCLQ--YDERVIISGSSD------STVRVWDVN 302 (486)
Q Consensus 243 ~~~~l-~~~~~dg~i~i~d~~~~----~~~~~~~-------~~~~~v~~~~--~~~~~l~~~~~d------g~i~vwd~~ 302 (486)
++++| +.+..++.|.++|+.+. +..+++. .....-..+. .++ .++++..+ |.|.++|.+
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 45554 45667789999998765 6666663 0111222233 366 66666555 789999999
Q ss_pred CCcEEEEecccCcc---EEEEEEcC--CeEEEEe-------------------CCCcEEEEECCCCCceeeEEeeec-Cc
Q psy9182 303 TGEMVNTLIHHCEA---VLHLRFSN--GMMVTCS-------------------KDRSIAVWDMVSPNEITLRRVLVG-HR 357 (486)
Q Consensus 303 ~~~~~~~~~~~~~~---i~~~~~~~--~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~~~-~~ 357 (486)
+++.+.++...... -..+.|++ +.+++.. .+..|.+||+.+++...... .+ ..
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~--vg~~g 250 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT--LGEEN 250 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE--SCTTE
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe--cCCCC
Confidence 99999988643222 23466665 3566653 37899999998864433222 22 11
Q ss_pred ccEEEEEe----CCCEEEEEe------CCCcEEEEECCCceE--EEEE--cCC----------------cccEEE--EEe
Q psy9182 358 AAVNVVDF----DEKYIVSAS------GDRTIKVWNTSSCEF--VRTL--NGH----------------KRGIAC--LQY 405 (486)
Q Consensus 358 ~~v~~~~~----~~~~l~~~~------~d~~i~iwd~~~~~~--~~~~--~~~----------------~~~v~~--~~~ 405 (486)
.....+.| +++++++++ .+++|.+|....++. ...+ ... ...... ++.
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23333433 678877766 566887766554432 1111 110 112333 455
Q ss_pred CCCEEEEEeC-CCcEEEEECC---CCeeeEEecCcc--------------cCeEEEEe--cCCEEEEEe
Q psy9182 406 RDRLVVSGSS-DNTIRLWDIE---CGACLRVLEGHE--------------ELVRCIRF--DAKRIVSGA 454 (486)
Q Consensus 406 ~~~~l~~~~~-dg~v~iwd~~---~~~~~~~~~~h~--------------~~v~~~~~--~~~~l~s~~ 454 (486)
++++|.++.. .+.|.+||+. +.+.+..+.... ..-..+.+ ||++|+++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 7888877775 6899999985 235555553320 02355666 999999988
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.25 E-value=8.4e-05 Score=75.07 Aligned_cols=173 Identities=10% Similarity=0.042 Sum_probs=90.9
Q ss_pred eCCCEEEEEe-cC-----CeEEEEECCCceeeEEEcCC-------cccEEEEEecCCEEEEEeCC---------CcEEEE
Q psy9182 242 YDDHKIVSGL-RD-----NTIKVWDRVSLQCIKVLTGH-------TGSVLCLQYDERVIISGSSD---------STVRVW 299 (486)
Q Consensus 242 ~~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~l~~~~~d---------g~i~vw 299 (486)
++++.++.|+ .+ ..+.+||..+.+-... ... ...-..+..++...+.|+.+ ..+..|
T Consensus 296 ~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~y 374 (656)
T 1k3i_A 296 SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY 374 (656)
T ss_dssp TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred cCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeee
Confidence 4889999988 34 5799999987663332 100 00000011244444444433 357889
Q ss_pred ECCCCcEEEEecccCc---------cEEEEEE---cCCeEEEEeCCC-----------cEEEEECCCCCceeeE-Eeeec
Q psy9182 300 DVNTGEMVNTLIHHCE---------AVLHLRF---SNGMMVTCSKDR-----------SIAVWDMVSPNEITLR-RVLVG 355 (486)
Q Consensus 300 d~~~~~~~~~~~~~~~---------~i~~~~~---~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~-~~~~~ 355 (486)
|..+............ .-.++.+ .+..++.|+.++ .|.+||..+..-.... ..+..
T Consensus 375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~ 454 (656)
T 1k3i_A 375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF 454 (656)
T ss_dssp ECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS
T ss_pred ecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC
Confidence 9887765433322111 2233333 234666666432 6778887765432111 01112
Q ss_pred CcccEEEEEe-CCCEEEEEeCC-----------CcEEEEECCCceEEEE--EcCCccc--EEEEEeCCCEEEEEeC
Q psy9182 356 HRAAVNVVDF-DEKYIVSASGD-----------RTIKVWNTSSCEFVRT--LNGHKRG--IACLQYRDRLVVSGSS 415 (486)
Q Consensus 356 ~~~~v~~~~~-~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~--~~~~~~~--v~~~~~~~~~l~~~~~ 415 (486)
......++.. +++.++.|+.+ ..+.+||..+.+-... +...... ...+..++++++.|+.
T Consensus 455 ~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 455 ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 2223334444 88999988754 4689999887653321 1111111 2222348899999885
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.23 E-value=0.00075 Score=61.40 Aligned_cols=224 Identities=11% Similarity=0.104 Sum_probs=128.4
Q ss_pred EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEc-C------------------CcccEEEEEec--CCEEEEEeCCCcE
Q psy9182 238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT-G------------------HTGSVLCLQYD--ERVIISGSSDSTV 296 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~------------------~~~~v~~~~~~--~~~l~~~~~dg~i 296 (486)
.++.++++.++++..++.|..||..+++...... . ....+..+.++ +..|+++...+.|
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i 103 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHL 103 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEE
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCE
Confidence 4456677778888889999999987654332111 0 01246777774 4667777666668
Q ss_pred EEEECCCCcEEEEec---c-cCccEEEEEEcC--CeEEEEeC------------------CCcEEEEECCCCCceeeEEe
Q psy9182 297 RVWDVNTGEMVNTLI---H-HCEAVLHLRFSN--GMMVTCSK------------------DRSIAVWDMVSPNEITLRRV 352 (486)
Q Consensus 297 ~vwd~~~~~~~~~~~---~-~~~~i~~~~~~~--~~l~~~~~------------------dg~i~i~d~~~~~~~~~~~~ 352 (486)
..+|..+++...... . .......+++.+ +.++++.. ++.|..||..+++.......
T Consensus 104 ~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~ 183 (322)
T 2fp8_A 104 SVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE 183 (322)
T ss_dssp EEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE
T ss_pred EEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC
Confidence 899977654321111 1 113456777765 35555443 26688888765542211111
Q ss_pred eecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCCce--EEEEEcCCcccEEEEEeC--CCEEEEEeC----------
Q psy9182 353 LVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYR--DRLVVSGSS---------- 415 (486)
Q Consensus 353 ~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~--~~~l~~~~~---------- 415 (486)
......+++ +++.|+.+ ...+.|..|++.... ....+....+ ...+..+ |++.++...
T Consensus 184 ----~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~ 258 (322)
T 2fp8_A 184 ----LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRV 258 (322)
T ss_dssp ----ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCE
T ss_pred ----CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCC
Confidence 112233455 67766655 456889999987421 1111111112 4556664 666555544
Q ss_pred CCcEEEEECCCCeeeEEecCcc----cCeEEEEe-cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 416 DNTIRLWDIECGACLRVLEGHE----ELVRCIRF-DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 416 dg~v~iwd~~~~~~~~~~~~h~----~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.+.|..+|.. ++.+..+.... ..++++.+ +++.+++...++.|..+++...
T Consensus 259 ~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 259 DPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred ccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence 4678888875 77777775432 35677777 4444455556788999998644
No 259
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.22 E-value=1.8e-05 Score=73.06 Aligned_cols=212 Identities=13% Similarity=0.060 Sum_probs=124.0
Q ss_pred ceEEEEeCCCEEEEEe--cCCeEEEEECCCceeeEEEc-------CCcccEEEEEecC-CEEEEEeC------CCcEEEE
Q psy9182 236 GVYCLQYDDHKIVSGL--RDNTIKVWDRVSLQCIKVLT-------GHTGSVLCLQYDE-RVIISGSS------DSTVRVW 299 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~-~~l~~~~~------dg~i~vw 299 (486)
.-++++++++.+++.. .++.++||.+.+++.. .+. .+...+..+.++. ..|+.... ++.|.+|
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~ 98 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAW 98 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEE
T ss_pred ceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEE
Confidence 3455667888887753 2342444444355432 221 2345678888842 34444432 4789999
Q ss_pred ECCCCcEEEEeccc------CccEEEEEEcC--CeEEEEe----CCCcEEEEECCCCCceeeEEeeecCcccE---EEEE
Q psy9182 300 DVNTGEMVNTLIHH------CEAVLHLRFSN--GMMVTCS----KDRSIAVWDMVSPNEITLRRVLVGHRAAV---NVVD 364 (486)
Q Consensus 300 d~~~~~~~~~~~~~------~~~i~~~~~~~--~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~v---~~~~ 364 (486)
|+.+++.+..+... ......+++++ +.++++. .++.|.+||+.+++.. +...+|.... ..+.
T Consensus 99 d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~---r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 99 DTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA---RVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp ETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE---EECTTCTTTSCCSCCCE
T ss_pred ECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE---EEecCCCccccccccee
Confidence 99999877766432 23457788873 4554443 5789999999877543 3332321110 2234
Q ss_pred eCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCC-cEEEEECC---CCe-----eeE--
Q psy9182 365 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN-TIRLWDIE---CGA-----CLR-- 431 (486)
Q Consensus 365 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-~v~iwd~~---~~~-----~~~-- 431 (486)
+++..+.+.+.++.+..|.. .+..+++ +++.|+.+..++ .|..++.. .+. ...
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHL--------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKI 241 (343)
T ss_dssp ETTEECBEECTTSCEECCCC--------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTC
T ss_pred ECCEEEEeccCCCceeceec--------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcce
Confidence 46767777777777765531 2344555 577788777665 45544431 110 000
Q ss_pred EecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182 432 VLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 432 ~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~ 465 (486)
...++......+++ +|+.+++...++.|.+||..
T Consensus 242 ~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 242 ERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred EecccCCCCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 11123334556777 77888888888999999983
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.20 E-value=0.00027 Score=69.90 Aligned_cols=192 Identities=14% Similarity=0.061 Sum_probs=124.0
Q ss_pred CCEEEEEecCCeEEEEECCCceeeEEEcCCccc---------EEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS---------VLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHC 314 (486)
Q Consensus 244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 314 (486)
+..+++++.++.|..+|..+|+.+..+...... ...+...+..++.++.|+.|..+|.++|+.+.......
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~ 147 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD 147 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence 455666666455999999999998877643221 02234467788889999999999999999988765432
Q ss_pred c----cEE-EEEEcCC------eEEEEe------CCCcEEEEECCCCCceeeEEeeecC---------------------
Q psy9182 315 E----AVL-HLRFSNG------MMVTCS------KDRSIAVWDMVSPNEITLRRVLVGH--------------------- 356 (486)
Q Consensus 315 ~----~i~-~~~~~~~------~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~--------------------- 356 (486)
. .+. .....++ .+++++ .++.|+.+|..+++..-.......+
T Consensus 148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~ 227 (582)
T 1flg_A 148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWP 227 (582)
T ss_dssp GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSC
T ss_pred CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCC
Confidence 1 111 1112233 666665 3789999999998865322210000
Q ss_pred -c------------------ccEEEEEeCCCEEEEEeC--------------------C----CcEEEEECCCceEEEEE
Q psy9182 357 -R------------------AAVNVVDFDEKYIVSASG--------------------D----RTIKVWNTSSCEFVRTL 393 (486)
Q Consensus 357 -~------------------~~v~~~~~~~~~l~~~~~--------------------d----~~i~iwd~~~~~~~~~~ 393 (486)
. -...++......++.+.. | +.|..+|..+|+.+-.+
T Consensus 228 ~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~ 307 (582)
T 1flg_A 228 DDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFY 307 (582)
T ss_dssp BCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEE
T ss_pred CccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEE
Confidence 0 001122334566666653 2 57999999999998887
Q ss_pred cC--Cc--------ccEEE-EE-eCC---CEEEEEeCCCcEEEEECCCCeeeEEecC
Q psy9182 394 NG--HK--------RGIAC-LQ-YRD---RLVVSGSSDNTIRLWDIECGACLRVLEG 435 (486)
Q Consensus 394 ~~--~~--------~~v~~-~~-~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 435 (486)
+. |. .++.. .. .+| ..++.++.+|.++++|.++|+.+..+..
T Consensus 308 q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 308 QHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp ESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred eCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 53 21 22221 11 356 3788899999999999999999877654
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.18 E-value=0.00032 Score=70.81 Aligned_cols=218 Identities=11% Similarity=0.007 Sum_probs=119.3
Q ss_pred EEEEeCCCEEEEEec-CCeEEEEECCCceeeEE--EcCCcccEEEEEe-cCCEEEEEe-CC-----CcEEEEECCCCcEE
Q psy9182 238 YCLQYDDHKIVSGLR-DNTIKVWDRVSLQCIKV--LTGHTGSVLCLQY-DERVIISGS-SD-----STVRVWDVNTGEMV 307 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~-~~~~l~~~~-~d-----g~i~vwd~~~~~~~ 307 (486)
.++..+++.+++|+. ++.+.+||..+.+-... +......-.+... +++.++.|+ .+ ..+.+||..+++..
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 445578999999984 45899999877653322 1211222334455 889999988 34 56999999887644
Q ss_pred EEe----c-ccCccEEEEE-EcCCeEEEEeCC---------CcEEEEECCCCCceeeEEeeec------CcccEEEEE--
Q psy9182 308 NTL----I-HHCEAVLHLR-FSNGMMVTCSKD---------RSIAVWDMVSPNEITLRRVLVG------HRAAVNVVD-- 364 (486)
Q Consensus 308 ~~~----~-~~~~~i~~~~-~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~------~~~~v~~~~-- 364 (486)
..- . .....-.++. ..+..++.|+.+ ..+..||..+............ ....-.++.
T Consensus 328 ~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~ 407 (656)
T 1k3i_A 328 SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD 407 (656)
T ss_dssp EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE
T ss_pred eCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEecc
Confidence 320 0 0000000000 112233444433 4578888877653322111111 011223333
Q ss_pred -eCCCEEEEEeCCC-----------cEEEEECCCceEEEEE--cCCc--ccEEEEEe-CCCEEEEEeCC-----------
Q psy9182 365 -FDEKYIVSASGDR-----------TIKVWNTSSCEFVRTL--NGHK--RGIACLQY-RDRLVVSGSSD----------- 416 (486)
Q Consensus 365 -~~~~~l~~~~~d~-----------~i~iwd~~~~~~~~~~--~~~~--~~v~~~~~-~~~~l~~~~~d----------- 416 (486)
.+++.++.|+.++ .+.+||..+.+..... ..+. ....++.. ++++++.|+.+
T Consensus 408 ~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~ 487 (656)
T 1k3i_A 408 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 487 (656)
T ss_dssp TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred CCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcc
Confidence 2677788877532 6888888876544332 1122 22343444 78999998854
Q ss_pred CcEEEEECCCCeeeE--EecCcccCeEEEEe--cCCEEEEEeC
Q psy9182 417 NTIRLWDIECGACLR--VLEGHEELVRCIRF--DAKRIVSGAY 455 (486)
Q Consensus 417 g~v~iwd~~~~~~~~--~~~~h~~~v~~~~~--~~~~l~s~~~ 455 (486)
..+.+||..+++-.. .+........+..+ +++.++.||.
T Consensus 488 ~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 488 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 568999997765322 11111122223333 8899999885
No 262
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.11 E-value=0.0041 Score=54.69 Aligned_cols=204 Identities=11% Similarity=0.034 Sum_probs=121.1
Q ss_pred EEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEE-eCCCcEEEEECCCCcEEEEeccc
Q psy9182 238 YCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG-SSDSTVRVWDVNTGEMVNTLIHH 313 (486)
Q Consensus 238 ~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~ 313 (486)
.++.++++.|+.+ ..++.|..++.........+.........+++ ++..++.+ ...+.|.++++............
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~ 120 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG 120 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECC
Confidence 4455555555544 45679999998766544444333245567777 34555544 45678999998754332222222
Q ss_pred CccEEEEEEcC--CeEEEEeC---CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECC
Q psy9182 314 CEAVLHLRFSN--GMMVTCSK---DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTS 385 (486)
Q Consensus 314 ~~~i~~~~~~~--~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~ 385 (486)
......+++++ +.++.+.. .+.|..+++...... . ...........+++ +++.|+.+. ..+.|.++|..
T Consensus 121 ~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~-~--~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 121 LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR-I--LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE-E--EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE-E--EEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 24567888875 46665554 368888887643321 1 11122234556666 456665544 56789999997
Q ss_pred CceEEEEEcCCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCeeeEEecCccc-CeEEEEe
Q psy9182 386 SCEFVRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEE-LVRCIRF 445 (486)
Q Consensus 386 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~h~~-~v~~~~~ 445 (486)
.......+.. ......++.++..|..+. ..+.|.++|..+++.+..+..... ....|++
T Consensus 198 g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~ 258 (267)
T 1npe_A 198 QPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITI 258 (267)
T ss_dssp EEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEE
T ss_pred CCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeee
Confidence 6544333332 223345666666655555 568999999999998888864331 2444544
No 263
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.07 E-value=0.00055 Score=61.62 Aligned_cols=224 Identities=13% Similarity=0.193 Sum_probs=126.6
Q ss_pred CCCEEEEEe-cC-----CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCCc---E
Q psy9182 243 DDHKIVSGL-RD-----NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTGE---M 306 (486)
Q Consensus 243 ~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~---~ 306 (486)
++..++.|+ .+ ..+.+||..+.+-... +........++..++..++.|+.+ ..+.+||..+++ .
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 445566666 33 3688999887653321 111112223344577788888765 469999998776 3
Q ss_pred EEE--ecccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC---
Q psy9182 307 VNT--LIHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD--- 376 (486)
Q Consensus 307 ~~~--~~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--- 376 (486)
... +.........+...+..++.|+.+ ..+.+||+.+.+-.. ............++..+++.++.|+.+
T Consensus 94 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 172 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSM-LGDMQTAREGAGLVVASGVIYCLGGYDGLN 172 (301)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEE-EEECSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred EECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEE-CCCCCCCcccceEEEECCEEEEECCCCCCc
Confidence 322 222222223333444455566543 368899987754322 122222223333444577777777654
Q ss_pred --CcEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCeeeEE--ecCcccCeEEEEe
Q psy9182 377 --RTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRV--LEGHEELVRCIRF 445 (486)
Q Consensus 377 --~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~h~~~v~~~~~ 445 (486)
..+.+||+.+.+-... +........++..++.+++.|+.+ ..+.+||+.+.+-... +.........+..
T Consensus 173 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 252 (301)
T 2vpj_A 173 ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL 252 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE
Confidence 4688999887654332 222222334556678888888764 4689999987653322 2212222344455
Q ss_pred cCCEEEEEeCC-----CcEEEEeCCCC
Q psy9182 446 DAKRIVSGAYD-----GKIKVWNLVAA 467 (486)
Q Consensus 446 ~~~~l~s~~~d-----g~v~iwdl~~~ 467 (486)
+++.++.|+.+ ..|.+||+.+.
T Consensus 253 ~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 253 RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 88888888766 35788888754
No 264
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.06 E-value=0.0007 Score=65.52 Aligned_cols=222 Identities=12% Similarity=0.074 Sum_probs=137.7
Q ss_pred CCCEEEEEec-CCeEEEEECCCceeeEEEcCC-cccEEEEE----ecCCEEEEEe------------------CCCcEEE
Q psy9182 243 DDHKIVSGLR-DNTIKVWDRVSLQCIKVLTGH-TGSVLCLQ----YDERVIISGS------------------SDSTVRV 298 (486)
Q Consensus 243 ~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~----~~~~~l~~~~------------------~dg~i~v 298 (486)
||+++++... ++.|.+.|+.+.++.+.+.-. ......+. .+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 7888777665 457999999999988855422 23455555 3788888884 2467999
Q ss_pred EECCCCcEEEEecccCccEEEEEE--cCCeEEEEeCCC--------------------------------------cEEE
Q psy9182 299 WDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDR--------------------------------------SIAV 338 (486)
Q Consensus 299 wd~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~dg--------------------------------------~i~i 338 (486)
+|..+.+...++.... .-..+++ .++++++.+.+. .|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999998888775322 1222333 344555555332 4667
Q ss_pred EECCC--CCceeeEEeeecCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCce------------EEEEEcCCcccEEEE
Q psy9182 339 WDMVS--PNEITLRRVLVGHRAAVNVVDFDEKYIVSAS-GDRTIKVWNTSSCE------------FVRTLNGHKRGIACL 403 (486)
Q Consensus 339 ~d~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~iwd~~~~~------------~~~~~~~~~~~v~~~ 403 (486)
.|.++ +... ......+....-..+++||+++++++ .+.+|.++|+.+.+ .+..+... .....+
T Consensus 259 ID~~~~~~~~~-~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~ 336 (595)
T 1fwx_A 259 VDGRKEASSLF-TRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPLHT 336 (595)
T ss_dssp EECSGGGCCSS-EEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEE
T ss_pred EeCcccCCcee-EEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcceE
Confidence 77766 3221 11222222333334555899877766 57899999998653 23333322 234455
Q ss_pred Ee--CCCEEEEEeCCCcEEEEECCC----------CeeeEEecCcccCe-EEE------EecCCEEEEEeC---CCcE--
Q psy9182 404 QY--RDRLVVSGSSDNTIRLWDIEC----------GACLRVLEGHEELV-RCI------RFDAKRIVSGAY---DGKI-- 459 (486)
Q Consensus 404 ~~--~~~~l~~~~~dg~v~iwd~~~----------~~~~~~~~~h~~~v-~~~------~~~~~~l~s~~~---dg~v-- 459 (486)
.| +|...++...|+.|.+||+.+ .+.+..+..|-.+- .+. ..||++|+++.. |..+
T Consensus 337 aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~ 416 (595)
T 1fwx_A 337 AFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNV 416 (595)
T ss_dssp EECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCC
T ss_pred EECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccC
Confidence 55 474455666899999999976 56777777665432 111 128999998864 3321
Q ss_pred --------EEEeCCCC
Q psy9182 460 --------KVWNLVAA 467 (486)
Q Consensus 460 --------~iwdl~~~ 467 (486)
.++|+..+
T Consensus 417 gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 417 GPLKPENDQLIDISGD 432 (595)
T ss_dssp CSSCCEEEEEEECSSS
T ss_pred CCCCCCcceEEEcCCC
Confidence 78888543
No 265
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.05 E-value=0.00092 Score=60.16 Aligned_cols=224 Identities=14% Similarity=0.165 Sum_probs=125.2
Q ss_pred CCCEEEEEecC----CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCCcEEEEe-
Q psy9182 243 DDHKIVSGLRD----NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTGEMVNTL- 310 (486)
Q Consensus 243 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~- 310 (486)
++..++.|+.+ ..+.+||..+.+-... +......-.++..++..++.|+.+ ..+.+||..+.+....-
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 34456666643 3688899887653322 111111122334477778887755 35889999877643322
Q ss_pred -cccCccEEEEEEcCCeEEEEeCCC-----cEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-------C
Q psy9182 311 -IHHCEAVLHLRFSNGMMVTCSKDR-----SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-------R 377 (486)
Q Consensus 311 -~~~~~~i~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-------~ 377 (486)
.........+.+.+..++.|+.++ .+.+||+.+.+-.. ............++..+++.++.|+.+ .
T Consensus 95 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 95 MRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH-VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp CSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred CCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee-cCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence 111222233344555666676543 57788887654221 111222222333444577777776542 4
Q ss_pred cEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCeeeEE--ecCcccCeEEEEecCC
Q psy9182 378 TIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRV--LEGHEELVRCIRFDAK 448 (486)
Q Consensus 378 ~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~ 448 (486)
.+.+||+.+.+-... +........++..++.+++.|+.+ ..+.+||+.+.+-... +......-..+..++.
T Consensus 174 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~ 253 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGL 253 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTE
T ss_pred EEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCE
Confidence 588999987654332 222222334556678888888764 4689999987643221 2111122234445888
Q ss_pred EEEEEeCCC-----cEEEEeCCCC
Q psy9182 449 RIVSGAYDG-----KIKVWNLVAA 467 (486)
Q Consensus 449 ~l~s~~~dg-----~v~iwdl~~~ 467 (486)
.++.|+.++ .+.+||+.+.
T Consensus 254 i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 254 LYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEECCcCCCcccccEEEEcCCCC
Confidence 888888664 4899998765
No 266
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.96 E-value=0.0018 Score=58.19 Aligned_cols=188 Identities=14% Similarity=0.166 Sum_probs=107.4
Q ss_pred EEeCCCEEEEEecC-----CeEEEEECCCce---eeE--EEcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCC
Q psy9182 240 LQYDDHKIVSGLRD-----NTIKVWDRVSLQ---CIK--VLTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTG 304 (486)
Q Consensus 240 ~~~~~~~l~~~~~d-----g~i~i~d~~~~~---~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 304 (486)
...++..++.|+.+ ..+.+||..+.+ -.. .+........++..++..++.|+.+ ..+.+||+.+.
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCC
Confidence 34577777888765 468999987755 222 2221122223344477777777654 35889998877
Q ss_pred cEEEE--ecccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-
Q psy9182 305 EMVNT--LIHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD- 376 (486)
Q Consensus 305 ~~~~~--~~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d- 376 (486)
+.... +.........+...+..++.|+.+ ..+.+||+.+.+-.. ............++..++..++.|+.+
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN-VTPMATKRSGAGVALLNDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred eEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEe-CCCCCcccccceEEEECCEEEEEeCCCC
Confidence 54332 222222223333444466666543 468899987764221 111222222334445577777777653
Q ss_pred ----CcEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCe
Q psy9182 377 ----RTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGA 428 (486)
Q Consensus 377 ----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~ 428 (486)
..+.+||+.+.+-... +........++..++++++.|+.+ ..|.+||+++.+
T Consensus 218 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 4689999987654332 222222334555678888888765 457888987654
No 267
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.94 E-value=0.0014 Score=59.05 Aligned_cols=222 Identities=11% Similarity=0.200 Sum_probs=125.9
Q ss_pred CEEEEEec--CCeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC----CcEEEEECCCCcEEEEe--cccC
Q psy9182 245 HKIVSGLR--DNTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD----STVRVWDVNTGEMVNTL--IHHC 314 (486)
Q Consensus 245 ~~l~~~~~--dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~--~~~~ 314 (486)
..++.|+. ...+.+||..+.+-... +......-.++..++..++.|+.+ ..+.+||..+++....- ....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 34555654 35789999887653321 111112223444577788888755 67889999887643322 2212
Q ss_pred ccEEEEEEcCCeEEEEeCC------CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC---------CCcE
Q psy9182 315 EAVLHLRFSNGMMVTCSKD------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG---------DRTI 379 (486)
Q Consensus 315 ~~i~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---------d~~i 379 (486)
.....+...+..++.|+.+ ..+.+||..+.+-.. ............++..+++.++.|+. -..+
T Consensus 93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 171 (306)
T 3ii7_A 93 DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT-KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSC 171 (306)
T ss_dssp BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCE
T ss_pred cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe-CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceE
Confidence 2223334445566666654 468899988764221 11122222233344457777777653 3458
Q ss_pred EEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCee--eEEecCcccCeEEEEecCCEE
Q psy9182 380 KVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGAC--LRVLEGHEELVRCIRFDAKRI 450 (486)
Q Consensus 380 ~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~l 450 (486)
.+||+.+.+-... +......-.++..++++++.|+.+ ..+.+||+.+.+= +..+........++..++..+
T Consensus 172 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~ 251 (306)
T 3ii7_A 172 EVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVY 251 (306)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEE
T ss_pred EEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEE
Confidence 8999988653322 222222334455577777777654 4688999987542 222222222344555588888
Q ss_pred EEEeCC-----CcEEEEeCCCC
Q psy9182 451 VSGAYD-----GKIKVWNLVAA 467 (486)
Q Consensus 451 ~s~~~d-----g~v~iwdl~~~ 467 (486)
+.|+.+ ..+.+||+.+.
T Consensus 252 v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEECBCSSSBCCEEEEEETTTT
T ss_pred EEeCcCCCeeeeeEEEEcCCCC
Confidence 888854 46888998774
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.91 E-value=0.015 Score=54.25 Aligned_cols=217 Identities=11% Similarity=0.020 Sum_probs=122.5
Q ss_pred EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEE-EEEeCCCcEEEEECCCCcEEEEecccCccEEEEEE
Q psy9182 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVI-ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322 (486)
Q Consensus 246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~ 322 (486)
+|+.+ ....|+.+++........+.. ......++|+ +..| ++-...+.|..+++........+.........+++
T Consensus 89 ~l~~~-~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav 166 (386)
T 3v65_B 89 VLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV 166 (386)
T ss_dssp EEEEE-CBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEE
T ss_pred eeEee-cCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEE
Confidence 34433 345788888877665554443 3446778874 3444 44456788999998866544433332233344555
Q ss_pred c--CCeE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CC-CcEEEEECCCceEEEEEcC
Q psy9182 323 S--NGMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GD-RTIKVWNTSSCEFVRTLNG 395 (486)
Q Consensus 323 ~--~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~ 395 (486)
+ .+.| ++-...+.|.+.++....... .....-.....+++ .+..|+.+. .. +.|..+++...........
T Consensus 167 d~~~g~lY~~d~~~~~I~~~~~dg~~~~~---l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 243 (386)
T 3v65_B 167 DWVHDKLYWTDSGTSRIEVANLDGAHRKV---LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT 243 (386)
T ss_dssp ETTTTEEEEEETTTTEEEECBTTSCSCEE---EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EeCCCeEEEEcCCCCeEEEEeCCCCceEE---eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC
Confidence 4 3444 455556788888876543221 12222234455555 355555444 34 6788888765433333333
Q ss_pred CcccEEEEEeC--CC-EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE-EEEEeCCCcEEEEeCCCC
Q psy9182 396 HKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 396 ~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~ 467 (486)
.......++++ +. +.++-+..+.|..+|+........+.........|++++.. +++-...+.|..++..++
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 33345666664 44 44555567889999987443333343334456677774444 555556777888884443
No 269
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.90 E-value=0.0035 Score=60.75 Aligned_cols=217 Identities=12% Similarity=0.082 Sum_probs=137.7
Q ss_pred EEEEecCCeEEEEECCCceeeEEEcC---------------------------------Ccc-cE-------EEEEe---
Q psy9182 247 IVSGLRDNTIKVWDRVSLQCIKVLTG---------------------------------HTG-SV-------LCLQY--- 282 (486)
Q Consensus 247 l~~~~~dg~i~i~d~~~~~~~~~~~~---------------------------------~~~-~v-------~~~~~--- 282 (486)
+.+|+..|.++|+-+.+++.++.+.. +.. .+ ..+++
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 67899999999999888877766520 000 11 45566
Q ss_pred --cCCEEEEEeC-CCcEEEEECCCCcEEEEeccc-CccEEEEEEc----CCeEEEEe------------------CCCcE
Q psy9182 283 --DERVIISGSS-DSTVRVWDVNTGEMVNTLIHH-CEAVLHLRFS----NGMMVTCS------------------KDRSI 336 (486)
Q Consensus 283 --~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~-~~~i~~~~~~----~~~l~~~~------------------~dg~i 336 (486)
||+++++... ++.|.+.|+.+.++...+.-. ......+++. .+++++++ .++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 6777777665 456999999999988755322 2446677762 34777774 24578
Q ss_pred EEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC--------------------------------------c
Q psy9182 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR--------------------------------------T 378 (486)
Q Consensus 337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~--------------------------------------~ 378 (486)
.++|..+.+... +...+....-..+..+|+++++++.+. .
T Consensus 178 tvID~~t~~v~~--qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 178 TAVDADKWEVAW--QVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEETTTTEEEE--EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEECCCCeEEE--EEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 999998765443 222222333345566888888887543 3
Q ss_pred EEEEECCC--ceE-EEEEcC-CcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCe------------eeEEecCcccCeE
Q psy9182 379 IKVWNTSS--CEF-VRTLNG-HKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGA------------CLRVLEGHEELVR 441 (486)
Q Consensus 379 i~iwd~~~--~~~-~~~~~~-~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~------------~~~~~~~h~~~v~ 441 (486)
|.+.|.++ ++. +..+.. ....-..++++|+++++++ .+.+|.++|+.+.+ .+..+. -.....
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~ 334 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPL 334 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcc
Confidence 56666665 333 334432 1222244556788766655 68999999998653 233332 234577
Q ss_pred EEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 442 CIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 442 ~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
.++| +|...++.--|++|.+||++.
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 8888 673345566799999999986
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.84 E-value=0.017 Score=52.93 Aligned_cols=155 Identities=9% Similarity=-0.010 Sum_probs=86.5
Q ss_pred eEEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEe-CC-CcEEEEECCCCcEEEEec
Q psy9182 237 VYCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGS-SD-STVRVWDVNTGEMVNTLI 311 (486)
Q Consensus 237 v~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d-g~i~vwd~~~~~~~~~~~ 311 (486)
-+++.+.+..| ++-...+.|.+.+.........+.........++++ +..|+... .. +.|..+++..........
T Consensus 120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC
T ss_pred EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 45566644444 455556789999887554333343333445666664 44444443 34 778888876433322222
Q ss_pred ccCccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCc
Q psy9182 312 HHCEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSC 387 (486)
Q Consensus 312 ~~~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~ 387 (486)
..-.....+++++ +.|+.+ ...+.|..+|+....... ...........+++ .+..+++-...+.|..+|..++
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~---~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA---VISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEE---EEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 2334567788873 445444 456789999987543221 12122233445555 4444444456677888886666
Q ss_pred eEEEEEc
Q psy9182 388 EFVRTLN 394 (486)
Q Consensus 388 ~~~~~~~ 394 (486)
+....+.
T Consensus 277 ~~~~~i~ 283 (349)
T 3v64_C 277 KNQEIIR 283 (349)
T ss_dssp CSCEEEE
T ss_pred CccEEec
Confidence 6555554
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.80 E-value=0.023 Score=52.93 Aligned_cols=205 Identities=11% Similarity=0.027 Sum_probs=115.1
Q ss_pred EEEEeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCcccE--EEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182 238 YCLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLIHH 313 (486)
Q Consensus 238 ~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v--~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 313 (486)
+++.+.++.|+ +-...+.|..++.........+....... .++.+. +.+.++-...+.|.+.++........+...
T Consensus 121 l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~ 200 (386)
T 3v65_B 121 LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS 200 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC
Confidence 44454445544 44567789999987665444443222223 344443 444455555678988888755433334333
Q ss_pred CccEEEEEEcC--CeEEEEe-CC-CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCC
Q psy9182 314 CEAVLHLRFSN--GMMVTCS-KD-RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSS 386 (486)
Q Consensus 314 ~~~i~~~~~~~--~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~ 386 (486)
......+++++ +.|+... .+ +.|..+++....... .....-.....+++ ++..|+.+ ...+.|..+|+..
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 45567788874 4555444 34 678888876543221 11122233455666 45555544 4567899999875
Q ss_pred ceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182 387 CEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445 (486)
Q Consensus 387 ~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~ 445 (486)
......+.........++++ +.++++-...+.|..++..+|+.+..+.........|++
T Consensus 278 ~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 278 SHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp CSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 43333333333344555554 455556666788999997777777666543333444444
No 272
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.79 E-value=0.019 Score=51.92 Aligned_cols=127 Identities=11% Similarity=0.070 Sum_probs=72.8
Q ss_pred CCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEE-eCCCcEEEEECCCCCc--eeeEEeeecCcccEEEEEe--
Q psy9182 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTC-SKDRSIAVWDMVSPNE--ITLRRVLVGHRAAVNVVDF-- 365 (486)
Q Consensus 293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~-~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~-- 365 (486)
+|.|..+|..+++....... ......++++++ .++++ ..++.|..|++..... ....... .. ...+.+
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~g-P~gi~~d~ 238 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---PN-PGNIKRNA 238 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---SS-EEEEEECT
T ss_pred CceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---CC-CCCeEECC
Confidence 36788888876654322211 223345777754 45555 5568999999875321 1111111 12 445565
Q ss_pred CCCEEEEEeC----------CCcEEEEECCCceEEEEEcCCc----ccEEEEEeC-CCEEEEEeCCCcEEEEECC
Q psy9182 366 DEKYIVSASG----------DRTIKVWNTSSCEFVRTLNGHK----RGIACLQYR-DRLVVSGSSDNTIRLWDIE 425 (486)
Q Consensus 366 ~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~----~~v~~~~~~-~~~l~~~~~dg~v~iwd~~ 425 (486)
+|++.++... .+.|..+|.. ++.+..+.... ..++.+.+. +.+.++....+.|.++++.
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 5676655544 4678889874 77777765432 334555554 4444444567888888876
No 273
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.79 E-value=0.0043 Score=55.66 Aligned_cols=187 Identities=11% Similarity=0.144 Sum_probs=105.9
Q ss_pred EeCCCEEEEEecC-----CeEEEEECCCceeeEEE--cCCcccEEEEEecCCEEEEEeCCC-----cEEEEECCCCcEEE
Q psy9182 241 QYDDHKIVSGLRD-----NTIKVWDRVSLQCIKVL--TGHTGSVLCLQYDERVIISGSSDS-----TVRVWDVNTGEMVN 308 (486)
Q Consensus 241 ~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~ 308 (486)
..++..++.|+.+ ..+.+||..+.+-...- ........+...++..++.|+.++ .+.+||+.+.+...
T Consensus 59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 3477777888755 35889998876533221 111122233445788888887653 47889988776443
Q ss_pred Ee--cccCccEEEEEEcCCeEEEEeC-------CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC---
Q psy9182 309 TL--IHHCEAVLHLRFSNGMMVTCSK-------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD--- 376 (486)
Q Consensus 309 ~~--~~~~~~i~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--- 376 (486)
.- .........+.+.+..++.|+. -..+.+||+.+..-.. ............++..++..++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY-IAEMSTRRSGAGVGVLNNLLYAVGGHDGPL 217 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCBSSSS
T ss_pred cCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE-CCCCccccccccEEEECCEEEEECCCCCCc
Confidence 22 1111222333344445555543 2458899987754221 111222222334445577777777654
Q ss_pred --CcEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCCC-----cEEEEECCCCe
Q psy9182 377 --RTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGA 428 (486)
Q Consensus 377 --~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~ 428 (486)
..+.+||+.+.+-... +........++..++.+++.|+.++ .+.+||+.+.+
T Consensus 218 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 218 VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 4689999987654322 2222223345556788888887653 48899987654
No 274
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.77 E-value=0.0052 Score=56.70 Aligned_cols=227 Identities=10% Similarity=0.051 Sum_probs=121.5
Q ss_pred EeCCCEEEEEecC-CeEEEEECCC----ceeeEEEc-CCcccEEEEEecCCEEEEEeC-C---------CcEEEEECCCC
Q psy9182 241 QYDDHKIVSGLRD-NTIKVWDRVS----LQCIKVLT-GHTGSVLCLQYDERVIISGSS-D---------STVRVWDVNTG 304 (486)
Q Consensus 241 ~~~~~~l~~~~~d-g~i~i~d~~~----~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~-d---------g~i~vwd~~~~ 304 (486)
..++..++.|+.+ ..+.+||..+ .+.+..+. .....-.+...++.+++.|+. + ..+.+||..+.
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 3477777777644 4788999864 22222222 111222334457777777776 2 46899999887
Q ss_pred cEEEEec---ccCccEEEEEEcCCeEEEEeCC---------------------------------------CcEEEEECC
Q psy9182 305 EMVNTLI---HHCEAVLHLRFSNGMMVTCSKD---------------------------------------RSIAVWDMV 342 (486)
Q Consensus 305 ~~~~~~~---~~~~~i~~~~~~~~~l~~~~~d---------------------------------------g~i~i~d~~ 342 (486)
+-...-. .......++...+..++.|+.+ ..+.+||..
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 6433221 1112223344455566777654 578999987
Q ss_pred CCCceeeEEeeec-CcccEEEEEeCCCEEEEEeC------CCcEEEEEC--CCceEE--EEEcCCc--ccEEEEEeCCCE
Q psy9182 343 SPNEITLRRVLVG-HRAAVNVVDFDEKYIVSASG------DRTIKVWNT--SSCEFV--RTLNGHK--RGIACLQYRDRL 409 (486)
Q Consensus 343 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~------d~~i~iwd~--~~~~~~--~~~~~~~--~~v~~~~~~~~~ 409 (486)
+.+-... ..... ......++..+++.++.|+. ...+..||+ .+.+-. ..+.... ....++..++.+
T Consensus 177 ~~~W~~~-~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i 255 (357)
T 2uvk_A 177 TQQWSYA-GESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL 255 (357)
T ss_dssp TTEEEEE-EECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEE
T ss_pred CCcEEEC-CCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEE
Confidence 7643222 22221 11213344447777776653 345777876 443322 1221111 123455667888
Q ss_pred EEEEeCC----------------------CcEEEEECCCC--eeeEEecCcccCeEEEEecCCEEEEEeCCC------cE
Q psy9182 410 VVSGSSD----------------------NTIRLWDIECG--ACLRVLEGHEELVRCIRFDAKRIVSGAYDG------KI 459 (486)
Q Consensus 410 l~~~~~d----------------------g~v~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg------~v 459 (486)
++.|+.+ ..+.+||+.+. +.+..+......-.++.++++.++.||.++ .|
T Consensus 256 yv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v 335 (357)
T 2uvk_A 256 IFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDS 335 (357)
T ss_dssp EEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEE
T ss_pred EEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeE
Confidence 7877732 25788998754 344444433333445566888888888653 35
Q ss_pred EEEeCCCCC
Q psy9182 460 KVWNLVAAL 468 (486)
Q Consensus 460 ~iwdl~~~~ 468 (486)
.++++++++
T Consensus 336 ~~l~~~~~~ 344 (357)
T 2uvk_A 336 VLITVKDNK 344 (357)
T ss_dssp EEEEC-CCS
T ss_pred EEEEEcCcE
Confidence 556877654
No 275
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.75 E-value=0.0065 Score=54.64 Aligned_cols=188 Identities=12% Similarity=0.118 Sum_probs=108.3
Q ss_pred EEeCCCEEEEEecC----CeEEEEECCCceeeEEE--cCCcccEEEEEecCCEEEEEeCC------CcEEEEECCCCcEE
Q psy9182 240 LQYDDHKIVSGLRD----NTIKVWDRVSLQCIKVL--TGHTGSVLCLQYDERVIISGSSD------STVRVWDVNTGEMV 307 (486)
Q Consensus 240 ~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~ 307 (486)
...++..++.|+.+ ..+.+||..+.+-...- ........+...++.+++.|+.+ ..+.+||..+.+..
T Consensus 52 ~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 52 VFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp EEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred EEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 34577778888755 67899998886543322 21122223344577888888765 46899999887643
Q ss_pred EEe--cccCccEEEEEEcCCeEEEEeC---------CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC
Q psy9182 308 NTL--IHHCEAVLHLRFSNGMMVTCSK---------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD 376 (486)
Q Consensus 308 ~~~--~~~~~~i~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 376 (486)
..- .........+...+..++.|+. -..+.+||+.+..-.. ............++..+++.++.|+.+
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~ 210 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTE-LCPMIEARKNHGLVFVKDKIFAVGGQN 210 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCEE
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEE-CCCccchhhcceEEEECCEEEEEeCCC
Confidence 321 1111222233344445555543 3558899988764221 111222222333444577777777643
Q ss_pred -----CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCe
Q psy9182 377 -----RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGA 428 (486)
Q Consensus 377 -----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~ 428 (486)
..+.+||+.+.+-.. .+........++..++.+++.|+.+ ..+.+||+.+.+
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 468899988764322 2222233345556688888888854 568899987753
No 276
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.68 E-value=0.0026 Score=57.35 Aligned_cols=227 Identities=10% Similarity=0.117 Sum_probs=125.4
Q ss_pred EEeCCCEEEEEecC----CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeC----C-----CcEEEEECCCC
Q psy9182 240 LQYDDHKIVSGLRD----NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSS----D-----STVRVWDVNTG 304 (486)
Q Consensus 240 ~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~----d-----g~i~vwd~~~~ 304 (486)
...++..++.|+.+ ..+.+||..+.+-... +......-..+..++.+++.|+. + ..+.+||..+.
T Consensus 21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 34466777777742 3688999887653322 11111112233447777777765 2 46889999877
Q ss_pred cEEEEe--cccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-
Q psy9182 305 EMVNTL--IHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD- 376 (486)
Q Consensus 305 ~~~~~~--~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d- 376 (486)
+....- .........+.+.+..++.|+.+ ..+.+||+.+.+-... ...........++..++..++.|+.+
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV-APMLTRRIGVGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred eEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeEC-CCCCccccceEEEEECCEEEEEeCCCC
Confidence 543321 11112223333444455555533 4688899876542211 11222222333444577777777654
Q ss_pred ----CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCeeeE--EecCcccCeEEE
Q psy9182 377 ----RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLR--VLEGHEELVRCI 443 (486)
Q Consensus 377 ----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~--~~~~h~~~v~~~ 443 (486)
..+.+||+.+.+-.. .+........++..++.+++.|+.+ ..+.+||+.+.+-.. .+.........+
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 259 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGIT 259 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEE
Confidence 458899988765332 1222222334555678888888764 569999998764322 122122223344
Q ss_pred EecCCEEEEEeCC-----CcEEEEeCCCC
Q psy9182 444 RFDAKRIVSGAYD-----GKIKVWNLVAA 467 (486)
Q Consensus 444 ~~~~~~l~s~~~d-----g~v~iwdl~~~ 467 (486)
..+++.++.|+.+ ..+.+||+.+.
T Consensus 260 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 260 VHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 4577888888754 35788888764
No 277
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.67 E-value=0.0087 Score=54.07 Aligned_cols=218 Identities=11% Similarity=0.092 Sum_probs=119.5
Q ss_pred EEEEecCCeEEEEECCCceeeE-EEcC--CcccEEEEEecCCEEEEEeC-----C------CcEEEEECCCCcEEEEe--
Q psy9182 247 IVSGLRDNTIKVWDRVSLQCIK-VLTG--HTGSVLCLQYDERVIISGSS-----D------STVRVWDVNTGEMVNTL-- 310 (486)
Q Consensus 247 l~~~~~dg~i~i~d~~~~~~~~-~~~~--~~~~v~~~~~~~~~l~~~~~-----d------g~i~vwd~~~~~~~~~~-- 310 (486)
++.|+ ..+.+||..+++-.. .+.. ......++..++..++.|+. . ..+.+||..+++-...-
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 44454 579999998876432 1111 11112233347888888873 1 12778998877643211
Q ss_pred cccCccEEEEEEcCCeEEEEeCC--------CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC------C
Q psy9182 311 IHHCEAVLHLRFSNGMMVTCSKD--------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG------D 376 (486)
Q Consensus 311 ~~~~~~i~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------d 376 (486)
.........+...+..++.|+.+ ..+.+||..+.+-. .............++..+++.++.|+. -
T Consensus 86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 164 (315)
T 4asc_A 86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-ESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCL 164 (315)
T ss_dssp SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBC
T ss_pred CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-ECCCCCCcccceeEEEECCEEEEEeCCCCCCccc
Confidence 11111112233344455566532 45889998775321 111122222333344567777777765 2
Q ss_pred CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCCC-----cEEEEECCCCeeeEE--ecCcccCeEEEEecC
Q psy9182 377 RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGACLRV--LEGHEELVRCIRFDA 447 (486)
Q Consensus 377 ~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~--~~~h~~~v~~~~~~~ 447 (486)
..+.+||..+.+-.. .+......-.+...++++++.|+.++ .+.+||+.+.+=... +.........+.+++
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 244 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVG 244 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred ceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECC
Confidence 468999988764322 22222223345566788888887654 588999987643222 222222334455588
Q ss_pred CEEEEEeCCC--------------cEEEEeCCCC
Q psy9182 448 KRIVSGAYDG--------------KIKVWNLVAA 467 (486)
Q Consensus 448 ~~l~s~~~dg--------------~v~iwdl~~~ 467 (486)
..++.|+.++ .+.+||+.+.
T Consensus 245 ~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 245 TLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred EEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 8888887642 3678888764
No 278
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.64 E-value=0.037 Score=50.74 Aligned_cols=216 Identities=12% Similarity=0.048 Sum_probs=120.1
Q ss_pred EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEE-EEeCCCcEEEEECCCCcEEEEecccCccEEEEEE
Q psy9182 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVII-SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322 (486)
Q Consensus 246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~ 322 (486)
.|+.+ ....|+..++........+.. ......++|+ +..|+ +-...+.|..+++........+.........+++
T Consensus 46 ~ll~~-~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav 123 (349)
T 3v64_C 46 VLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV 123 (349)
T ss_dssp EEEEE-CBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEE
T ss_pred eeEee-cccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEE
Confidence 34433 345688888776655444443 3346778774 34444 4445788999998866544433332233445555
Q ss_pred c--CCeE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC--CCEEEEEe-CC-CcEEEEECCCceEEEEE-c
Q psy9182 323 S--NGMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSAS-GD-RTIKVWNTSSCEFVRTL-N 394 (486)
Q Consensus 323 ~--~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d-~~i~iwd~~~~~~~~~~-~ 394 (486)
+ .+.+ ++-...+.|.+.++....... .....-.....++++ +..|+.+. .. +.|..+++.... ...+ .
T Consensus 124 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~---l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~ 199 (349)
T 3v64_C 124 DWVHDKLYWTDSGTSRIEVANLDGAHRKV---LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIAD 199 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEE---EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCC
T ss_pred ecCCCeEEEEcCCCCeEEEEcCCCCceEE---EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEE
Confidence 4 4444 455567889999987543221 122222334555553 45554443 44 778888876433 2232 2
Q ss_pred CCcccEEEEEeC--CCEE-EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE-EEEEeCCCcEEEEeCCCC
Q psy9182 395 GHKRGIACLQYR--DRLV-VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 395 ~~~~~v~~~~~~--~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~ 467 (486)
........++++ +..| ++-...+.|..+|+........+.........|++++.. +++-...+.|...+-.++
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 223345666664 4444 444556789999987443333333334456677774444 444445677877774333
No 279
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.60 E-value=0.034 Score=49.30 Aligned_cols=222 Identities=12% Similarity=0.147 Sum_probs=144.4
Q ss_pred EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCC-CcEEEEeccc---
Q psy9182 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNT-GEMVNTLIHH--- 313 (486)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~--- 313 (486)
-++|..+.+|.-. ...+.|+|+++.+.++.+.- ...|.-..| +.+.|+..+. ..|+-|++.. ..+.+.+..|
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L 149 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSL 149 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSEEEEEES-SEEEEEESSTTCCCEEEEECCGGG
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCeEEEEcC-CcEEEEcccCCCCCceeeecchhc
Confidence 3567777666655 67899999999999988874 457777888 7777777765 4799999974 3455555433
Q ss_pred -CccEEEEEEcCC---eEEEEe------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCC-----EEEEEeC---
Q psy9182 314 -CEAVLHLRFSNG---MMVTCS------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-----YIVSASG--- 375 (486)
Q Consensus 314 -~~~i~~~~~~~~---~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~l~~~~~--- 375 (486)
...|..-..+++ .+++|- -.|.+.+|..+.+. .+.+.+|...-..+..+|+ .++.+..
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 225 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 225 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE----EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETT
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc----cceeeeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 234555555543 333332 23678889887642 3667788777766666443 3333322
Q ss_pred CCcEEEEECCCc---e-----EEEEEc-C---CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182 376 DRTIKVWNTSSC---E-----FVRTLN-G---HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441 (486)
Q Consensus 376 d~~i~iwd~~~~---~-----~~~~~~-~---~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~ 441 (486)
.+++++-++... . ....+. . ...--.++..+ -..+..-+.-|.|++||+++|.++..-+-..+.|.
T Consensus 226 g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 226 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 305 (365)
T ss_dssp EEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceE
Confidence 258888887432 1 111111 1 12223444444 45688888999999999999999988877777776
Q ss_pred EEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 442 CIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 442 ~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.-+. +..-++.....|.|.--.++..
T Consensus 306 ~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 306 VTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 5555 5556777778898877766643
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.51 E-value=0.0043 Score=63.55 Aligned_cols=104 Identities=8% Similarity=0.046 Sum_probs=57.9
Q ss_pred EEEEeCCCEEEEEec---CCeEEEEECCCc--ee-eEEE-cCCcccEEEEEe-cCCEEEEEeC-C----CcEEEEECCCC
Q psy9182 238 YCLQYDDHKIVSGLR---DNTIKVWDRVSL--QC-IKVL-TGHTGSVLCLQY-DERVIISGSS-D----STVRVWDVNTG 304 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~---dg~i~i~d~~~~--~~-~~~~-~~~~~~v~~~~~-~~~~l~~~~~-d----g~i~vwd~~~~ 304 (486)
..+++|+++|+.... ...|.++|+.++ +. +..+ ........++.| +++.|+..+. + ..|..+|+.++
T Consensus 276 ~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~ 355 (751)
T 2xe4_A 276 MYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP 355 (751)
T ss_dssp EEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST
T ss_pred EEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc
Confidence 457889998887653 346888898775 23 1333 334445566663 4665554443 2 36777787653
Q ss_pred -cEEE-EecccC-ccEEEEEEcCCe-EEEEeCCCc--EEEEEC
Q psy9182 305 -EMVN-TLIHHC-EAVLHLRFSNGM-MVTCSKDRS--IAVWDM 341 (486)
Q Consensus 305 -~~~~-~~~~~~-~~i~~~~~~~~~-l~~~~~dg~--i~i~d~ 341 (486)
+... .+.... ..+..+.+.++. +++...++. |.++|+
T Consensus 356 ~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 356 SDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred ccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 2211 222222 245666776664 455556665 555665
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.44 E-value=0.062 Score=48.47 Aligned_cols=177 Identities=11% Similarity=0.193 Sum_probs=107.0
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---------eEEEEeC---CCcEEEEECC--CCCceee
Q psy9182 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---------MMVTCSK---DRSIAVWDMV--SPNEITL 349 (486)
Q Consensus 284 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---------~l~~~~~---dg~i~i~d~~--~~~~~~~ 349 (486)
...++.....+-+.+||+ +|+.+..+.. ..+..+..-++ .+++... ++.|.+|++. ++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345666666778999999 7888887753 34444444333 2333333 5789999773 332 211
Q ss_pred EEe----eecCcccEEEEEe-----CCC-EEEEEeCCCcEEEEEC-------CCceEEEEEcCCcccEEEEEeC--CCEE
Q psy9182 350 RRV----LVGHRAAVNVVDF-----DEK-YIVSASGDRTIKVWNT-------SSCEFVRTLNGHKRGIACLQYR--DRLV 410 (486)
Q Consensus 350 ~~~----~~~~~~~v~~~~~-----~~~-~l~~~~~d~~i~iwd~-------~~~~~~~~~~~~~~~v~~~~~~--~~~l 410 (486)
... .......+..++. .+. ++++...+|.+..|++ .+.+.++++.... .+-.+..+ ...|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-q~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS-QTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-CEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-CcceEEEcCCCCeE
Confidence 110 0011022332333 343 6888888999999988 2346677777544 34444443 6789
Q ss_pred EEEeCCCcEEEEECC-----CCeeeEEec-Cc-ccCeEEEEe----cCC-EEEEEe-CCCcEEEEeCC
Q psy9182 411 VSGSSDNTIRLWDIE-----CGACLRVLE-GH-EELVRCIRF----DAK-RIVSGA-YDGKIKVWNLV 465 (486)
Q Consensus 411 ~~~~~dg~v~iwd~~-----~~~~~~~~~-~h-~~~v~~~~~----~~~-~l~s~~-~dg~v~iwdl~ 465 (486)
+.+-++.-|..++.+ +++.+..+. ++ ...+..|+. +++ +|++++ .++++.+||..
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999998777777754 355665553 22 235777777 444 666666 57799999986
No 282
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.42 E-value=0.038 Score=49.82 Aligned_cols=219 Identities=11% Similarity=0.142 Sum_probs=116.9
Q ss_pred EEEEEecCCeEEEEECCCceeeE-EEcC--CcccEEEEEecCCEEEEEeC----CC-------cEEEEECCCCcEEEE--
Q psy9182 246 KIVSGLRDNTIKVWDRVSLQCIK-VLTG--HTGSVLCLQYDERVIISGSS----DS-------TVRVWDVNTGEMVNT-- 309 (486)
Q Consensus 246 ~l~~~~~dg~i~i~d~~~~~~~~-~~~~--~~~~v~~~~~~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~-- 309 (486)
.++.|+. .+.+||..+.+-.. .+.. ......++..++..++.|+. ++ .+..||..+++....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444543 48899988876443 1111 11112223347788888873 12 177889887754332
Q ss_pred ecccCccEEEEEEcCCeEEEEeCC-------CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC------C
Q psy9182 310 LIHHCEAVLHLRFSNGMMVTCSKD-------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG------D 376 (486)
Q Consensus 310 ~~~~~~~i~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------d 376 (486)
+.............+..++.|+.+ ..+.+||+.+.+-.. ............++..++..++.|+. -
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCT 174 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEEETTEEEEECCEESSSCBC
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEEECCEEEEEcCCCCCCCcc
Confidence 111111223333445566666653 357888887654221 11111112222333457777777653 2
Q ss_pred CcEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCee--eEEecCcccCeEEEEecC
Q psy9182 377 RTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGAC--LRVLEGHEELVRCIRFDA 447 (486)
Q Consensus 377 ~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~ 447 (486)
..+.+||+.+.+-... +........+...++.+++.|+.+ ..+.+||+.+.+= +..+.........+.+++
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 254 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAG 254 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETT
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECC
Confidence 4589999988653322 222222234555678888888754 3577899876542 222222222334455588
Q ss_pred CEEEEEeCC--------------CcEEEEeCCCC
Q psy9182 448 KRIVSGAYD--------------GKIKVWNLVAA 467 (486)
Q Consensus 448 ~~l~s~~~d--------------g~v~iwdl~~~ 467 (486)
..++.||.+ ..+.+||+.+.
T Consensus 255 ~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 255 SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp EEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred EEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 888887754 35788888764
No 283
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.41 E-value=0.079 Score=48.97 Aligned_cols=222 Identities=12% Similarity=0.146 Sum_probs=145.4
Q ss_pred EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCC-CcEEEEeccc---
Q psy9182 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNT-GEMVNTLIHH--- 313 (486)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~--- 313 (486)
-++|..+.+|.-. ...+.|+|+++.+.++.+.-. ..|.-..| +.+.|+..+. ..|+-|++.. ..+.+.+..|
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~L 148 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSL 148 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETTEEEEECS-SEEEEEESSSSCCCEEEEECCGGG
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCCeEEEEcC-CeeEEecccCCCCchhheecchhc
Confidence 3566666666554 679999999999999888743 46767777 7787777764 5799999964 3455555433
Q ss_pred -CccEEEEEEcCC---eEEEEe------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCC-----EEEEEeCC--
Q psy9182 314 -CEAVLHLRFSNG---MMVTCS------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-----YIVSASGD-- 376 (486)
Q Consensus 314 -~~~i~~~~~~~~---~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~l~~~~~d-- 376 (486)
...|..-..+++ .+++|- -.|.+.+|..+.+. .+.+.+|......+..+|+ .++.+...
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----cchheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 234555555543 333332 24678899887653 2667788887777777543 34444332
Q ss_pred -CcEEEEECCCc--------eEEEEEc----CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182 377 -RTIKVWNTSSC--------EFVRTLN----GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 441 (486)
Q Consensus 377 -~~i~iwd~~~~--------~~~~~~~----~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~ 441 (486)
+.+++-++... +....+. ....--.++..+ -..+..-+.-|.|++||+.++.++..-+-..+.|.
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 304 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceE
Confidence 78888887542 1111111 111222344443 45688888999999999999999988877777776
Q ss_pred EEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182 442 CIRF--DAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 442 ~~~~--~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.-+. +..-++.....|.|.--.++..
T Consensus 305 ~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EecccCCCCcEEEEccCceEEEEEEccc
Confidence 6655 4556777778898877666643
No 284
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.37 E-value=0.073 Score=47.67 Aligned_cols=218 Identities=13% Similarity=0.013 Sum_probs=120.3
Q ss_pred eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC--CcEEEEECCCCcEEEEecc
Q psy9182 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD--STVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~ 312 (486)
-.++.++++++++-..++.|..||.... ....+. .......+++ +++++++.... ..|..+|..+++.......
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 3456667886666667899999997654 333333 2345677777 56755544332 2477778777775433221
Q ss_pred -cCccEEEEE-EcCCeEEEEe-CCCcEEEEECCCCCc-eeeEE------eeecCcccEEEEEeCCCEEEEEe-CCCcEEE
Q psy9182 313 -HCEAVLHLR-FSNGMMVTCS-KDRSIAVWDMVSPNE-ITLRR------VLVGHRAAVNVVDFDEKYIVSAS-GDRTIKV 381 (486)
Q Consensus 313 -~~~~i~~~~-~~~~~l~~~~-~dg~i~i~d~~~~~~-~~~~~------~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~i 381 (486)
.......++ +.++.+++.. .++.|..+|...+.. ..... .....-.....+..++++|+.+. ..+.|..
T Consensus 114 ~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~ 193 (306)
T 2p4o_A 114 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLR 193 (306)
T ss_dssp TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEE
T ss_pred CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEE
Confidence 112223333 2344455444 588899999765321 10000 00011123344567777665554 5678999
Q ss_pred EECCC-ceE--EEEEc-CCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeE--EecCcccCeEEEEec-----CCEE
Q psy9182 382 WNTSS-CEF--VRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR--VLEGHEELVRCIRFD-----AKRI 450 (486)
Q Consensus 382 wd~~~-~~~--~~~~~-~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~h~~~v~~~~~~-----~~~l 450 (486)
+|+.. ++. ...+. .....=.++..+|++.++....+.|.++|.. |+... .+.......++++|. ++.|
T Consensus 194 ~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~L 272 (306)
T 2p4o_A 194 IPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAI 272 (306)
T ss_dssp EEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEE
T ss_pred EEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEE
Confidence 99874 321 11111 1111112334457777776778899999976 66533 233333568899984 3566
Q ss_pred EEEeCCC
Q psy9182 451 VSGAYDG 457 (486)
Q Consensus 451 ~s~~~dg 457 (486)
+.++..+
T Consensus 273 yVt~~~~ 279 (306)
T 2p4o_A 273 YVVTNGG 279 (306)
T ss_dssp EEEECTT
T ss_pred EEECCCC
Confidence 6665443
No 285
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.37 E-value=0.019 Score=51.60 Aligned_cols=187 Identities=11% Similarity=0.112 Sum_probs=104.2
Q ss_pred EeCCCEEEEEec----C-----CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCC
Q psy9182 241 QYDDHKIVSGLR----D-----NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTG 304 (486)
Q Consensus 241 ~~~~~~l~~~~~----d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 304 (486)
..++..++.|+. + ..+.+||..+.+-... +........+...+++.++.|+.+ ..+.+||..+.
T Consensus 68 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 68 VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTT
T ss_pred EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCC
Confidence 346777777765 2 4688899877653322 111112223344577777777643 35889999877
Q ss_pred cEEEEe--cccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-
Q psy9182 305 EMVNTL--IHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD- 376 (486)
Q Consensus 305 ~~~~~~--~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d- 376 (486)
+....- .........+.+.+..++.|+.+ ..+.+||+.+.+-.. ............++..++..++.|+.+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 226 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRM-ITAMNTIRSGAGVCVLHNCIYAAGGYDG 226 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred eEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEee-CCCCCCccccceEEEECCEEEEEeCCCC
Confidence 543321 11112223333444456666543 468899987653221 111222222333444577777777654
Q ss_pred ----CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCe
Q psy9182 377 ----RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGA 428 (486)
Q Consensus 377 ----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~ 428 (486)
..+.+||+.+.+-.. .+........++..++++++.|+.+ ..+.+||+.+.+
T Consensus 227 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 227 QDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 569999998765332 2222222334555677888887754 457888887654
No 286
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=97.33 E-value=0.039 Score=48.78 Aligned_cols=222 Identities=11% Similarity=0.064 Sum_probs=125.0
Q ss_pred eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc
Q psy9182 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA 316 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 316 (486)
+..++......+.-. ||.|+.|-....-.+..-......|..++......+.-. ||.|+.|-....-.+..-..-...
T Consensus 26 i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~~~~~~ 103 (282)
T 3qhy_B 26 VDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVPAEARSG 103 (282)
T ss_dssp CCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCGGGSSS
T ss_pred CcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCCcccCCC
Confidence 334444444444445 899999965432111111112235777777444444445 899999976532111111111346
Q ss_pred EEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCC
Q psy9182 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396 (486)
Q Consensus 317 i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 396 (486)
|..++......++-. +|.|+.|-......+. ........|..++....+.+.-. ||.|+.|-....-.+..-...
T Consensus 104 v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~ 178 (282)
T 3qhy_B 104 VDAIAAGAWASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEA 178 (282)
T ss_dssp EEEEEEETTEEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGG
T ss_pred eEEEECcCCEEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceec
Confidence 888888877766677 9999999765433221 11122345777777555544455 799999976542211111112
Q ss_pred cccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 397 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 397 ~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
...|..++......+.- .||.|+.|=....-.+..-......|..|+. ....++.. ||.|..|--....
T Consensus 179 ~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 179 QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRTA 248 (282)
T ss_dssp GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCCC
T ss_pred CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCCc
Confidence 34677777765554444 6999999976543222111112346778888 44444444 9999999866543
No 287
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00076 Score=61.01 Aligned_cols=184 Identities=9% Similarity=0.024 Sum_probs=106.8
Q ss_pred CEEEEEecCCeEEEEECCCceeeEEEcCC-cccEEEEEe----cCCEEEEE--eCCCcEEEEECCCCcEEEEeccc----
Q psy9182 245 HKIVSGLRDNTIKVWDRVSLQCIKVLTGH-TGSVLCLQY----DERVIISG--SSDSTVRVWDVNTGEMVNTLIHH---- 313 (486)
Q Consensus 245 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~----~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~---- 313 (486)
..+++++.||.|.-+|..+|+....++.. ..++....- .+..++.+ +.||.|..+|..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46889999999999999999999998754 123332221 12244444 68999999999988665544321
Q ss_pred CccEEE---EEE-------cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCc----ccEEEEE-------eCCCEEEE
Q psy9182 314 CEAVLH---LRF-------SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR----AAVNVVD-------FDEKYIVS 372 (486)
Q Consensus 314 ~~~i~~---~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----~~v~~~~-------~~~~~l~~ 372 (486)
..++.. ... .++.+++|+.+|.+...|+.+++.+.....-.... ....|.. ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 122221 011 46688999999999999999998764332211000 0001111 12456777
Q ss_pred EeCCCcEEEEECCCceEEEEE-----cCCccc--E---EEEEeCCCEEEEEeCCCcEEEEECCCCeeeE
Q psy9182 373 ASGDRTIKVWNTSSCEFVRTL-----NGHKRG--I---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431 (486)
Q Consensus 373 ~~~d~~i~iwd~~~~~~~~~~-----~~~~~~--v---~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 431 (486)
+..+..+.+.+ ++|+ +..+ ...... + ..+..++.+ +.++.||.|.-+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77666666666 3443 2111 111000 0 000112444 457889999999988888776
No 288
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.21 E-value=0.33 Score=51.95 Aligned_cols=127 Identities=10% Similarity=0.143 Sum_probs=73.4
Q ss_pred cEEEEECCCCCceeeEEeeecCcccEEEEE---e-C--CCEEEEEe----------CCCcEEEEECCCceEEEEEc-CCc
Q psy9182 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVD---F-D--EKYIVSAS----------GDRTIKVWNTSSCEFVRTLN-GHK 397 (486)
Q Consensus 335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~---~-~--~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~-~~~ 397 (486)
.|++.|..+.+..... .+ .....+.++. + + ..++++|+ ..|.|++|++..+++....+ ...
T Consensus 808 ~i~lidp~t~~~i~~~-~l-~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~ 885 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAH-QF-LQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEETTTCCEEEEE-EC-CTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred EEEEEeCCCCeEEEEE-eC-CCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence 3566666555433211 11 2223344443 3 2 46888886 35789999987544322221 235
Q ss_pred ccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEE-ecCccc-CeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182 398 RGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEE-LVRCIRFDAKRIVSGAYDGKIKVWNLV 465 (486)
Q Consensus 398 ~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~-~v~~~~~~~~~l~s~~~dg~v~iwdl~ 465 (486)
+.++++.. +| +|++|- ...|++|++...+.+.. ...+.. .+..+...+++++.|..-..|.+...+
T Consensus 886 g~v~al~~~~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~ 954 (1158)
T 3ei3_A 886 GAVYSMVEFNG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYK 954 (1158)
T ss_dssp SCEEEEEEETT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEE
T ss_pred CcCEEEeeeCC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEE
Confidence 67888875 56 444443 47899999986654441 111211 133565678999999887778776544
No 289
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.18 E-value=0.12 Score=46.24 Aligned_cols=177 Identities=6% Similarity=-0.050 Sum_probs=92.6
Q ss_pred EEEEeCCCEEEEEecC--CeEEEEECCCceeeEEEcC-CcccEEEEE-ecCCEEEEEe-CCCcEEEEECCCCcE-EEEec
Q psy9182 238 YCLQYDDHKIVSGLRD--NTIKVWDRVSLQCIKVLTG-HTGSVLCLQ-YDERVIISGS-SDSTVRVWDVNTGEM-VNTLI 311 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~-~~~~v~~~~-~~~~~l~~~~-~dg~i~vwd~~~~~~-~~~~~ 311 (486)
+++.++++++++.... ..|..+|..+++....... .......+. +.+..++.+. .++.|..+|..+++. +....
T Consensus 77 ia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 77 LAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp EEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 4556677765554332 2477778777765433321 111223333 3444444444 588999999876532 21111
Q ss_pred ---------ccCccEEEEEEcCCeEEE-EeCCCcEEEEECCC-CCceeeEEee-ecCcccEEEEEeCCCEEEEEeCCCcE
Q psy9182 312 ---------HHCEAVLHLRFSNGMMVT-CSKDRSIAVWDMVS-PNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTI 379 (486)
Q Consensus 312 ---------~~~~~i~~~~~~~~~l~~-~~~dg~i~i~d~~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~d~~i 379 (486)
........+...++.+++ -...+.|..||+.. +... ....+ ......-.++..+|++.++....+.|
T Consensus 157 ~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~-~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPG-EPEIFVEQTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp GGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBC-CCEEEEESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred CccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCC-ccEEEeccCCCCCeEECCCCCEEEEeCCCCeE
Confidence 111233445555555544 45678899999875 2211 11111 11111112334478777776677899
Q ss_pred EEEECCCceEEE--EEcCCcccEEEEEeC-----CCEEEEEeCC
Q psy9182 380 KVWNTSSCEFVR--TLNGHKRGIACLQYR-----DRLVVSGSSD 416 (486)
Q Consensus 380 ~iwd~~~~~~~~--~~~~~~~~v~~~~~~-----~~~l~~~~~d 416 (486)
.++|.. ++... .+.......+++++. ++.|+.++..
T Consensus 236 ~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 236 VRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 999975 65532 333333456777774 3555555543
No 290
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.16 E-value=0.13 Score=46.32 Aligned_cols=227 Identities=12% Similarity=-0.003 Sum_probs=119.9
Q ss_pred ceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCC
Q psy9182 126 RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGG 205 (486)
Q Consensus 126 g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~ 205 (486)
..|+..|+.+.+....+.. ......++|++ .++..+++-..++.|..+++.....
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~--------------~~~~ly~~D~~~~~I~~~~~~g~~~---------- 64 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEV--------------ASNRIYWSDLSQRMICSTQLDRAHG---------- 64 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-CSSEEEEEEET--------------TTTEEEEEETTTTEEEEEEC---------------
T ss_pred CeEEEEECCCcceEehhcC-CCceEEEEEEe--------------CCCEEEEEECCCCcEEEEECCCCCC----------
Confidence 4688888887765554443 33556777762 1223344444566777777543100
Q ss_pred CCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec-
Q psy9182 206 PPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD- 283 (486)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~- 283 (486)
+......+. .......-+++.+.+..| ++-...+.|.+++.........+.........++.+
T Consensus 65 --------------~~~~~~~~~-~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp 129 (316)
T 1ijq_A 65 --------------VSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 129 (316)
T ss_dssp -----------------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEET
T ss_pred --------------CcccEEEEe-CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCC
Confidence 000000010 011122345566545444 454567899999987544333333333445666663
Q ss_pred -CCEEEEEeCC--CcEEEEECCCCcEEEEe-cccCccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEEeeecC
Q psy9182 284 -ERVIISGSSD--STVRVWDVNTGEMVNTL-IHHCEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGH 356 (486)
Q Consensus 284 -~~~l~~~~~d--g~i~vwd~~~~~~~~~~-~~~~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~ 356 (486)
+..++.+... +.|...++.. .....+ ...-.....+++++ +.|+.+ ...+.|..+|+...... ........
T Consensus 130 ~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~-~~~~~~~~ 207 (316)
T 1ijq_A 130 VHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKR 207 (316)
T ss_dssp TTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEECTTT
T ss_pred CCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE-EEeecCCc
Confidence 4555554432 6888888753 333333 22334567788873 455544 45678999998753322 11111111
Q ss_pred cccEEEEEeCCCE-EEEEeCCCcEEEEECCCceEEEEEc
Q psy9182 357 RAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLN 394 (486)
Q Consensus 357 ~~~v~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~ 394 (486)
......+++++.. +++-...+.|..+|..+++.+..+.
T Consensus 208 ~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 208 LAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred cCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 2334455654444 4444566789999987777665554
No 291
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.14 E-value=0.074 Score=48.81 Aligned_cols=191 Identities=9% Similarity=0.026 Sum_probs=101.7
Q ss_pred EeCCCEEEEEec-C---------CeEEEEECCCceeeEE--Ec-CCcccEEEEEecCCEEEEEeCC--------------
Q psy9182 241 QYDDHKIVSGLR-D---------NTIKVWDRVSLQCIKV--LT-GHTGSVLCLQYDERVIISGSSD-------------- 293 (486)
Q Consensus 241 ~~~~~~l~~~~~-d---------g~i~i~d~~~~~~~~~--~~-~~~~~v~~~~~~~~~l~~~~~d-------------- 293 (486)
..++..++.|+. + ..+.+||..+.+-... +. .......++..++++++.|+.+
T Consensus 63 ~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 63 FIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp EETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhc
Confidence 346777777776 2 4688999887653221 11 1112223444688888888764
Q ss_pred -------------------------CcEEEEECCCCcEEEE--ecccCcc-EEEEEEcCCeEEEEeC------CCcEEEE
Q psy9182 294 -------------------------STVRVWDVNTGEMVNT--LIHHCEA-VLHLRFSNGMMVTCSK------DRSIAVW 339 (486)
Q Consensus 294 -------------------------g~i~vwd~~~~~~~~~--~~~~~~~-i~~~~~~~~~l~~~~~------dg~i~i~ 339 (486)
..+.+||..+.+-... +...... ...+...+..++.|+. ...+..|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEE
Confidence 4789999987754332 2211111 2233333445555543 3457778
Q ss_pred EC--CCCCceeeEEeeecC--cccEEEEEeCCCEEEEEeCC----------------------CcEEEEECCCce--EEE
Q psy9182 340 DM--VSPNEITLRRVLVGH--RAAVNVVDFDEKYIVSASGD----------------------RTIKVWNTSSCE--FVR 391 (486)
Q Consensus 340 d~--~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~~~~~d----------------------~~i~iwd~~~~~--~~~ 391 (486)
|+ .+.. .......... .....++..++..++.|+.+ ..+.+||+.+.+ .+.
T Consensus 223 d~d~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 223 DFTGNNLK-WNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp ECC---CE-EEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred EecCCCCc-EEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 87 3321 1111111111 11223455577777777632 257789987643 344
Q ss_pred EEcCCcccEEEEEeCCCEEEEEeCCC------cEEEEECCCCeeeEE
Q psy9182 392 TLNGHKRGIACLQYRDRLVVSGSSDN------TIRLWDIECGACLRV 432 (486)
Q Consensus 392 ~~~~~~~~v~~~~~~~~~l~~~~~dg------~v~iwd~~~~~~~~~ 432 (486)
.+......-.++..++++++.|+.++ .|.++++++++.+..
T Consensus 302 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 302 ELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp ECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 44433333455667888888888653 356668877766544
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.12 E-value=0.14 Score=46.06 Aligned_cols=209 Identities=10% Similarity=0.028 Sum_probs=116.9
Q ss_pred CCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEE-EEeCCCcEEEEECCC----CcEEEEecccCccEEEEEEc--
Q psy9182 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVII-SGSSDSTVRVWDVNT----GEMVNTLIHHCEAVLHLRFS-- 323 (486)
Q Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~i~vwd~~~----~~~~~~~~~~~~~i~~~~~~-- 323 (486)
...|+..|+.+.+....+.. .....++.++ ++.|+ +-..++.|..+++.. ......+.........++++
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 35688899888766555543 3456778874 44454 444568899999875 22222222222334566664
Q ss_pred CCeE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-C-CcEEEEECCCceEEEEE-cCCc
Q psy9182 324 NGMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-D-RTIKVWNTSSCEFVRTL-NGHK 397 (486)
Q Consensus 324 ~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d-~~i~iwd~~~~~~~~~~-~~~~ 397 (486)
.+.+ ++-..++.|.++|+....... ...........++. .+..++.+.. . +.|...++.. +....+ ...-
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~---~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~ 163 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKT---LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENI 163 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEE---EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSC
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEE---EEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCC
Confidence 4444 444667899999987543221 11222234455555 3555555544 2 6888888754 333333 2233
Q ss_pred ccEEEEEeC--CCEEE-EEeCCCcEEEEECCCCeeeEEe-c--CcccCeEEEEecCCEE-EEEeCCCcEEEEeCCCC
Q psy9182 398 RGIACLQYR--DRLVV-SGSSDNTIRLWDIECGACLRVL-E--GHEELVRCIRFDAKRI-VSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 398 ~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~~~~~~~~~-~--~h~~~v~~~~~~~~~l-~s~~~dg~v~iwdl~~~ 467 (486)
.....++++ +..|. +-+..+.|..+|+.. .....+ . ........|++++..| ++-...+.|..++..++
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCC
Confidence 445666664 45554 444667999999874 323333 2 1223456777755554 44445677888886544
No 293
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.12 E-value=0.2 Score=51.28 Aligned_cols=228 Identities=11% Similarity=0.113 Sum_probs=130.5
Q ss_pred ccceEEEEeCC-CEEEEEecCCeEEEEECCCceeeEEE-cCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182 234 SKGVYCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL 310 (486)
Q Consensus 234 ~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 310 (486)
...|.++..|. ..+..|+.+| +..||-...+..... ......|.++.. ....|..|+.+| +..||..+.+.....
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~ 98 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPE 98 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCS
T ss_pred cceEEEEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcc
Confidence 44577777653 4677788777 666774332211100 112345888766 456788888766 889998876433211
Q ss_pred cccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEe-eecCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCce
Q psy9182 311 IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV-LVGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCE 388 (486)
Q Consensus 311 ~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 388 (486)
......|.++...++.+.+++.+ .+..||..+.+....... .......|.++..+ ...+..++.+ -|..+|..+++
T Consensus 99 ~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~ 176 (758)
T 3ott_A 99 TDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGK 176 (758)
T ss_dssp CCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTE
T ss_pred cCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCc
Confidence 11233567776667788888876 688899876542211000 01123457777763 4445556654 47888987765
Q ss_pred EEEEE-cCC----cccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEec-CCEEEEEeCCCcEE
Q psy9182 389 FVRTL-NGH----KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-AKRIVSGAYDGKIK 460 (486)
Q Consensus 389 ~~~~~-~~~----~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~v~ 460 (486)
..... ... ...|.++..+ +..|..|+. +-+..+|..+++...........|.++..| ...|..|+.+ -+.
T Consensus 177 ~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~ 254 (758)
T 3ott_A 177 FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLY 254 (758)
T ss_dssp EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEE
T ss_pred eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-cee
Confidence 43211 111 2247777765 466666664 458889988765432211123457888773 4445556644 577
Q ss_pred EEeCCCC
Q psy9182 461 VWNLVAA 467 (486)
Q Consensus 461 iwdl~~~ 467 (486)
+++..+.
T Consensus 255 ~~~~~~~ 261 (758)
T 3ott_A 255 VYHNDTT 261 (758)
T ss_dssp EECCTTS
T ss_pred EEecCCC
Confidence 8886653
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.11 E-value=0.31 Score=49.77 Aligned_cols=212 Identities=11% Similarity=0.054 Sum_probs=118.3
Q ss_pred cCCeEEEEECCCceeeEEEcCCcccEEEEEec--CC-EEEEEeCCCcEEEEECCCC----cEEEEecccCccEEEEEEc-
Q psy9182 252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ER-VIISGSSDSTVRVWDVNTG----EMVNTLIHHCEAVLHLRFS- 323 (486)
Q Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~~- 323 (486)
....|+..++........+.. ...+.+++++ .. ++++-...+.|+.+++... .....+.........++++
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred cccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 445688888776655444443 4456677773 34 4445455678888888642 2222333223334455554
Q ss_pred -CC-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CC-CcEEEEECCCceEEEEEcCCc
Q psy9182 324 -NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GD-RTIKVWNTSSCEFVRTLNGHK 397 (486)
Q Consensus 324 -~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~~~ 397 (486)
.+ ++++-...+.|.+.++.......+ ..........|++ .+.+|+.+. .. +.|...++........+...-
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l---~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l 557 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKRKTL---FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 557 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEE---EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeEEEE---EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCC
Confidence 44 555556678999999876543221 2222334556666 345555554 23 678888887544444444343
Q ss_pred ccEEEEEeC--CCEEEEE-eCCCcEEEEECCCCeeeEEecC--cccCeEEEEecCCEEEEEe-CCCcEEEEeCCCC
Q psy9182 398 RGIACLQYR--DRLVVSG-SSDNTIRLWDIECGACLRVLEG--HEELVRCIRFDAKRIVSGA-YDGKIKVWNLVAA 467 (486)
Q Consensus 398 ~~v~~~~~~--~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~l~s~~-~dg~v~iwdl~~~ 467 (486)
.....|+++ +..|+.+ ...+.|...++........+.. .-....+|++++.+|+.+. ..+.|...|..++
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 556667765 4444444 4567899999874433333332 2234557777555555544 4567777775554
No 295
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.03 E-value=0.21 Score=46.57 Aligned_cols=244 Identities=11% Similarity=0.011 Sum_probs=130.0
Q ss_pred eEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccc
Q psy9182 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETP 197 (486)
Q Consensus 118 ~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~ 197 (486)
+|+.+. ...|+..++........+. ....+..++|+. .++..+++-...+.|..+++......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~--------------~~~~lywsD~~~~~I~~~~~~g~~~~- 147 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEV--------------ASNRIYWSDLSQRMICSTQLDRAHGV- 147 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEET--------------TTTEEEEEETTTTEEEEEEC-------
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeee--------------ccCceEEEecCCCeEEEEEcccCCCC-
Confidence 444443 3578888887665444433 334667888863 12223344444566666665321100
Q ss_pred cCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCCccc
Q psy9182 198 IQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS 276 (486)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (486)
.....+.........-+++.+. +.++++-...+.|.+.++........+......
T Consensus 148 ------------------------~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~ 203 (400)
T 3p5b_L 148 ------------------------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 203 (400)
T ss_dssp ------------------------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCC
T ss_pred ------------------------CcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCC
Confidence 0000011111122334556653 444455556778999988765544444433344
Q ss_pred EEEEEec--CCEEEEEeC--CCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceee
Q psy9182 277 VLCLQYD--ERVIISGSS--DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITL 349 (486)
Q Consensus 277 v~~~~~~--~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~ 349 (486)
...+++| +..|+.... .+.|...++............-.....+++++ +.|+.+ ...+.|..+|+........
T Consensus 204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 6677764 455555442 37899999865443333333335567788873 455554 4567899999875443222
Q ss_pred EEeeecCcccEEEEEeCCC-EEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182 350 RRVLVGHRAAVNVVDFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403 (486)
Q Consensus 350 ~~~~~~~~~~v~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 403 (486)
. .....-.....++.++. .+++-...+.|..+|..+++.+..+.........+
T Consensus 284 ~-~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i 337 (400)
T 3p5b_L 284 L-EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDM 337 (400)
T ss_dssp E-ECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEE
T ss_pred E-eCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceE
Confidence 1 11112233445666444 45555566789999988887776665443333333
No 296
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.02 E-value=0.034 Score=50.11 Aligned_cols=188 Identities=13% Similarity=0.108 Sum_probs=104.3
Q ss_pred EEeCCCEEEEEec----C-------CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC--------CcEEE
Q psy9182 240 LQYDDHKIVSGLR----D-------NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD--------STVRV 298 (486)
Q Consensus 240 ~~~~~~~l~~~~~----d-------g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d--------g~i~v 298 (486)
...++..++.|+. + ..+.+||..+.+-... +........+...++..++.|+.+ ..+.+
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEE
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEE
Confidence 3457788888874 1 1277889887653221 111111112334477777777742 45899
Q ss_pred EECCCCcEEEE--ecccCccEEEEEEcCCeEEEEeC-C-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEE
Q psy9182 299 WDVNTGEMVNT--LIHHCEAVLHLRFSNGMMVTCSK-D-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYI 370 (486)
Q Consensus 299 wd~~~~~~~~~--~~~~~~~i~~~~~~~~~l~~~~~-d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 370 (486)
||..+++-... +.........+...+..++.|+. + ..+.+||+.+.+-.. ............++..+++.+
T Consensus 122 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iy 200 (315)
T 4asc_A 122 YDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE-LAPMQTARSLFGATVHDGRII 200 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEE
T ss_pred ECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEE-CCCCCCchhceEEEEECCEEE
Confidence 99987754322 11112222333344556666665 2 468999987753221 111222223334445588888
Q ss_pred EEEeCCC-----cEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCCC--------------cEEEEECCCCe
Q psy9182 371 VSASGDR-----TIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN--------------TIRLWDIECGA 428 (486)
Q Consensus 371 ~~~~~d~-----~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg--------------~v~iwd~~~~~ 428 (486)
+.|+.++ .+.+||+.+.+-... +........++..++.+++.|+.++ .|.+||+++.+
T Consensus 201 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 201 VAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 8877654 588999987654332 2222233355566788888887642 47788887654
No 297
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.00 E-value=0.51 Score=50.48 Aligned_cols=307 Identities=10% Similarity=0.126 Sum_probs=153.1
Q ss_pred ceEEEeecCceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceeccCcceeecCCC-CCcceeeeccccc
Q psy9182 117 KYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH-DDTILIWDFLNYS 194 (486)
Q Consensus 117 ~~l~tg~~dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~-dg~i~vWd~~~~~ 194 (486)
.+++.++ ++.+.++++..+++...- ..-...|.|+++.+. .++. .....++.|.. |++++++++.+..
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~------~~~~---~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPL------GDSN---GLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCC------SSST---TCCSEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecC------CCCc---ccccEEEEEECCCCEEEEEECCCCC
Confidence 3555554 567777777655422111 112347888887531 0010 12456777775 9999999985422
Q ss_pred ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEEC--CCceeeE---
Q psy9182 195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDR--VSLQCIK--- 268 (486)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~--~~~~~~~--- 268 (486)
..... .+.. ...+..+...... ..+|.+|-.||.+.-+.+ .+++...
T Consensus 594 ~~~~~--------------------------~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~ 646 (1158)
T 3ei3_A 594 LLHKE--------------------------MLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKK 646 (1158)
T ss_dssp EEEEE--------------------------ECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEE
T ss_pred eEEEE--------------------------ECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcccccee
Confidence 11110 0000 0011122222222 346889999998765544 4444432
Q ss_pred EEcCCcccEEE--EEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEE-EEEc----CCeEEEEeCCCcEEEEEC
Q psy9182 269 VLTGHTGSVLC--LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH-LRFS----NGMMVTCSKDRSIAVWDM 341 (486)
Q Consensus 269 ~~~~~~~~v~~--~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~-~~~~----~~~l~~~~~dg~i~i~d~ 341 (486)
.+-| ..++.- +...+..-+.+..+....++--+ +..... ......+.. ..|+ ++-++..+ ++.++|..+
T Consensus 647 ~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i 722 (1158)
T 3ei3_A 647 VTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTI 722 (1158)
T ss_dssp EECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEE
T ss_pred EEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCcccCCCcEEEEc-CCceEEEEe
Confidence 2223 223322 22234333333445555555543 332221 111222322 2343 34455444 456888887
Q ss_pred CCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe---------------------------------------------
Q psy9182 342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--------------------------------------------- 374 (486)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--------------------------------------------- 374 (486)
............. ...+..+.+ +.+.++.+.
T Consensus 723 ~~~~~~~~~~ipL--~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1158)
T 3ei3_A 723 DEIQKLHIRTVPL--YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSF 800 (1158)
T ss_dssp CCSSSEEEEEEEC--SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------C
T ss_pred cccCCeeEEEEeC--CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhc
Confidence 6544332222211 122333333 122211111
Q ss_pred ----CCCcEEEEECCCceEEEEEcCCc-ccEEEEE---eC---CCEEEEEe----------CCCcEEEEECCCCeeeEEe
Q psy9182 375 ----GDRTIKVWNTSSCEFVRTLNGHK-RGIACLQ---YR---DRLVVSGS----------SDNTIRLWDIECGACLRVL 433 (486)
Q Consensus 375 ----~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~---~~---~~~l~~~~----------~dg~v~iwd~~~~~~~~~~ 433 (486)
.-+.|++.|..+++.+..++-.. ..+.++. +. ..++++|+ ..|.|.+|++..++.....
T Consensus 801 g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~ 880 (1158)
T 3ei3_A 801 GEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVA 880 (1158)
T ss_dssp CCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEE
T ss_pred CCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEE
Confidence 01357888888888776665332 3344443 32 47888887 3488999999754432222
Q ss_pred -cCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182 434 -EGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 434 -~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~~ 468 (486)
....++|++++- .| +|++|- ..+|++|++....
T Consensus 881 ~~~v~g~v~al~~~~g-~Lla~i-g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 881 EKEVKGAVYSMVEFNG-KLLASI-NSTVRLYEWTTEK 915 (1158)
T ss_dssp EEEESSCEEEEEEETT-EEEEEE-TTEEEEEEECTTS
T ss_pred EEEcCCcCEEEeeeCC-EEEEEc-CCEEEEEECCCCc
Confidence 224678999887 66 444443 5789999997653
No 298
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.98 E-value=0.2 Score=47.27 Aligned_cols=224 Identities=8% Similarity=0.051 Sum_probs=117.2
Q ss_pred ceEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC-C----cEEEEECCCCcEE
Q psy9182 236 GVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD-S----TVRVWDVNTGEMV 307 (486)
Q Consensus 236 ~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-g----~i~vwd~~~~~~~ 307 (486)
.-+++++ ++..|+++...+.|+.+|...+....... .......+++ +++.|+++... + .+...+.. +...
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~ 217 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFK 217 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSC
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Ccee
Confidence 3456676 35566666655889999998876554443 3445667777 57756665542 2 23444432 2211
Q ss_pred --EEecccCccEEEEEEcC--CeEEE-EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcE
Q psy9182 308 --NTLIHHCEAVLHLRFSN--GMMVT-CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTI 379 (486)
Q Consensus 308 --~~~~~~~~~i~~~~~~~--~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i 379 (486)
..+.. ......+++++ +.+++ -..++.|..++...+..... ... +.......+++ ++++|+.+ ...+.|
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~-~~~-~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL-FTI-QDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE-EEC-SSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-EEc-CCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 22221 22334556665 34444 44678899999876543211 111 11223445555 78855544 467789
Q ss_pred EEEECCC--ceE--EEEEcCC------c---------ccEE-EEEeC----------CCEEEEEeCCCcEEEEECCCCee
Q psy9182 380 KVWNTSS--CEF--VRTLNGH------K---------RGIA-CLQYR----------DRLVVSGSSDNTIRLWDIECGAC 429 (486)
Q Consensus 380 ~iwd~~~--~~~--~~~~~~~------~---------~~v~-~~~~~----------~~~l~~~~~dg~v~iwd~~~~~~ 429 (486)
..++... ++. +..+.+. . ..-. .+..+ +.+.++-...+.|+.++ ..|+.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 9987653 222 1222211 0 0111 23331 34455545567888888 44654
Q ss_pred eEEecC----c----c---------cCeEEEEec--CCEEEEEe-CCCcEEEEeCC
Q psy9182 430 LRVLEG----H----E---------ELVRCIRFD--AKRIVSGA-YDGKIKVWNLV 465 (486)
Q Consensus 430 ~~~~~~----h----~---------~~v~~~~~~--~~~l~s~~-~dg~v~iwdl~ 465 (486)
...... . . .....|+++ +..|+.+. ..+.|+.++++
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 333311 0 1 146778884 35555554 45678777754
No 299
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.97 E-value=0.24 Score=46.22 Aligned_cols=213 Identities=10% Similarity=0.028 Sum_probs=122.0
Q ss_pred cCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEE-eCCCcEEEEECCCC----cEEEEecccCccEEEEEEc-
Q psy9182 252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISG-SSDSTVRVWDVNTG----EMVNTLIHHCEAVLHLRFS- 323 (486)
Q Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~~- 323 (486)
....|+..++........+. ....+..++++ +..|+.+ ...+.|+.+++... .....+.........++++
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~ 168 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 168 (400)
T ss_dssp ETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEET
T ss_pred ccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEe
Confidence 35688888888765555444 34566788884 4455444 45678988988652 2233333334455666665
Q ss_pred -CC-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC--CCcEEEEECCCceEEEEEcCCc
Q psy9182 324 -NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHK 397 (486)
Q Consensus 324 -~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~ 397 (486)
.+ ++++-...+.|.+.++........ ....-.....+++ .+.+|+.+.. .+.|...++........+...-
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l---~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l 245 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVKRKTL---FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 245 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCSEEEE---EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC
T ss_pred cCCceEEEECCCCeEEEEeCCCCceEEE---EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC
Confidence 34 444555678899999876543221 2222233455555 3455555542 3688888887544333333333
Q ss_pred ccEEEEEeC--CCEEEEE-eCCCcEEEEECCCCeeeEEecC--cccCeEEEEecCCE-EEEEeCCCcEEEEeCCCCC
Q psy9182 398 RGIACLQYR--DRLVVSG-SSDNTIRLWDIECGACLRVLEG--HEELVRCIRFDAKR-IVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 398 ~~v~~~~~~--~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~~ 468 (486)
.....++++ +..|..+ ...+.|..+|+........... ......+|+.++.. +++-...+.|..+|..++.
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence 455667765 5555444 4568899999874433222222 23345577774444 5555566788888855543
No 300
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.0046 Score=55.93 Aligned_cols=143 Identities=9% Similarity=0.161 Sum_probs=88.0
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEeccc-CccEEEEEE----cCCeEEEE--eCCCcEEEEECCCCCceeeEEeeec-
Q psy9182 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHH-CEAVLHLRF----SNGMMVTC--SKDRSIAVWDMVSPNEITLRRVLVG- 355 (486)
Q Consensus 284 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~i~~~~~----~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~- 355 (486)
+..+++++.||.|.-+|..+|+...++... ..++....- .++.++++ +.||.|..+|..++....... ...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~-~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS-IRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE-HHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec-cccc
Confidence 457889999999999999999999998764 122222111 12244444 589999999988764321111 110
Q ss_pred -CcccEEE---EEe-------CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-------cEEEEE-------eCCCEE
Q psy9182 356 -HRAAVNV---VDF-------DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-------GIACLQ-------YRDRLV 410 (486)
Q Consensus 356 -~~~~v~~---~~~-------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~~~-------~~~~~l 410 (486)
...++.. ... .+..+++|+.+|.+...|+.+|+.+..+..... ...|.. ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1111211 001 567889999999999999999999999874321 111221 124567
Q ss_pred EEEeCCCcEEEEECCCCe
Q psy9182 411 VSGSSDNTIRLWDIECGA 428 (486)
Q Consensus 411 ~~~~~dg~v~iwd~~~~~ 428 (486)
+.+..+..+.+.+ ++|+
T Consensus 169 ~ig~~~y~v~~~~-~sG~ 185 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA 185 (339)
T ss_dssp EEEEEEEECEECC-TTSC
T ss_pred EEecceEEEEEEC-CCCC
Confidence 7777777777766 4454
No 301
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.92 E-value=0.45 Score=48.57 Aligned_cols=158 Identities=13% Similarity=0.022 Sum_probs=92.3
Q ss_pred ceEEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEeC--CCcEEEEECCCCcEEEEe
Q psy9182 236 GVYCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSS--DSTVRVWDVNTGEMVNTL 310 (486)
Q Consensus 236 ~v~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~--dg~i~vwd~~~~~~~~~~ 310 (486)
.-+++.+.++.| ++-...+.|.+.++........+.........|+++ ...|+.+.. .+.|...++........+
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 346667666544 455567889999987655444444344456677774 345555543 267999998754444344
Q ss_pred cccCccEEEEEEc--CCeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEE-eCCCcEEEEECCC
Q psy9182 311 IHHCEAVLHLRFS--NGMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSA-SGDRTIKVWNTSS 386 (486)
Q Consensus 311 ~~~~~~i~~~~~~--~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~d~~i~iwd~~~ 386 (486)
...-.....|+++ .+.|+.+ ...+.|..+++.......... ....-.....+++.+..|+.+ ...+.|...|..+
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~-~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~t 632 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 632 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-CTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec-CCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCC
Confidence 4334566778876 4455554 456789999986654332221 111222344666655555544 4567788888777
Q ss_pred ceEEEEEc
Q psy9182 387 CEFVRTLN 394 (486)
Q Consensus 387 ~~~~~~~~ 394 (486)
++.+..+.
T Consensus 633 G~~~~~l~ 640 (791)
T 3m0c_C 633 GSDVNLLA 640 (791)
T ss_dssp CCCCEEEE
T ss_pred CcceEEee
Confidence 76555553
No 302
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.80 E-value=0.057 Score=55.27 Aligned_cols=130 Identities=10% Similarity=-0.028 Sum_probs=67.3
Q ss_pred cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC---CCcEEEEECCCce-EE--EEEc-CCcccEEEEE-
Q psy9182 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG---DRTIKVWNTSSCE-FV--RTLN-GHKRGIACLQ- 404 (486)
Q Consensus 335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~iwd~~~~~-~~--~~~~-~~~~~v~~~~- 404 (486)
.|+.+++.++..................+.+ ||++|+..+. ...|.++|+.++. .. ..+. ........+.
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 5777887665321111111112223344445 8888776652 3468889988752 12 3332 3334445555
Q ss_pred eCCCEEEEEeC-C----CcEEEEECCCCeeeEE-ecCccc--CeEEEEecCCE-EEEEeCCCcE--EEEeC
Q psy9182 405 YRDRLVVSGSS-D----NTIRLWDIECGACLRV-LEGHEE--LVRCIRFDAKR-IVSGAYDGKI--KVWNL 464 (486)
Q Consensus 405 ~~~~~l~~~~~-d----g~v~iwd~~~~~~~~~-~~~h~~--~v~~~~~~~~~-l~s~~~dg~v--~iwdl 464 (486)
..+..|+..+. + ..|..+|+.++..... +..|.. .+..+.++++. +++...||.. .++++
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 34665554443 3 3577777765322222 222322 45677775555 5666677764 45554
No 303
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.74 E-value=0.3 Score=43.87 Aligned_cols=155 Identities=10% Similarity=-0.036 Sum_probs=88.8
Q ss_pred eEEEEeCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEe--CCCcEEEEECCCCcEEEEec
Q psy9182 237 VYCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGS--SDSTVRVWDVNTGEMVNTLI 311 (486)
Q Consensus 237 v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~dg~i~vwd~~~~~~~~~~~ 311 (486)
-+++.+.+. ++++-...+.|.+++.........+.........++++ +..|+.+. ..+.|...++..........
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 355665444 44455566789999976543333333333445666663 45555554 25788888876433222222
Q ss_pred ccCccEEEEEEcC--CeEEE-EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCC-EEEEEeCCCcEEEEECCCc
Q psy9182 312 HHCEAVLHLRFSN--GMMVT-CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-YIVSASGDRTIKVWNTSSC 387 (486)
Q Consensus 312 ~~~~~i~~~~~~~--~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~d~~i~iwd~~~~ 387 (486)
..-..-..+++++ +.|+. -+..+.|..+|+....... ...+.......+++++. .+++-...+.|..+|..++
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~---~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA---VVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEE---EecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 3334457788874 44544 4567889999987543221 11222334455666444 4445456678999998777
Q ss_pred eEEEEEc
Q psy9182 388 EFVRTLN 394 (486)
Q Consensus 388 ~~~~~~~ 394 (486)
+....+.
T Consensus 240 ~~~~~i~ 246 (318)
T 3sov_A 240 EGLREIH 246 (318)
T ss_dssp CSCEEEE
T ss_pred CceEEEe
Confidence 7655554
No 304
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.73 E-value=0.1 Score=46.98 Aligned_cols=188 Identities=11% Similarity=0.111 Sum_probs=101.8
Q ss_pred EEeCCCEEEEEec----CC-------eEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-------CcEEEE
Q psy9182 240 LQYDDHKIVSGLR----DN-------TIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-------STVRVW 299 (486)
Q Consensus 240 ~~~~~~~l~~~~~----dg-------~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-------g~i~vw 299 (486)
...++..++.|+. ++ .+.+||..+.+-... +........+...++..++.|+.+ ..+.+|
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~y 132 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCY 132 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEE
Confidence 3457778888873 12 277888877653321 111111223344477778887754 348889
Q ss_pred ECCCCcEEEEecc--cCccEEEEEEcCCeEEEEeC------CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEE
Q psy9182 300 DVNTGEMVNTLIH--HCEAVLHLRFSNGMMVTCSK------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371 (486)
Q Consensus 300 d~~~~~~~~~~~~--~~~~i~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 371 (486)
|..+.+-...-.. .......+...+..++.|+. -..+.+||+.+.+-.. ............++..+++.++
T Consensus 133 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv 211 (318)
T 2woz_A 133 DPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKD-LAPMKTPRSMFGVAIHKGKIVI 211 (318)
T ss_dssp ETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEE
T ss_pred eCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEE-CCCCCCCcccceEEEECCEEEE
Confidence 9987754432111 11111223334445555553 2458999988754221 1112222222334455777777
Q ss_pred EEeCC-----CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC--------------CcEEEEECCCCe
Q psy9182 372 SASGD-----RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD--------------NTIRLWDIECGA 428 (486)
Q Consensus 372 ~~~~d-----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d--------------g~v~iwd~~~~~ 428 (486)
.|+.+ ..+.+||+.+.+-.. .+........++..++.+++.|+.+ ..+.+||+.+.+
T Consensus 212 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 212 AGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 77643 357789988754322 2222223334556678888877754 357888887654
No 305
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.72 E-value=0.014 Score=59.12 Aligned_cols=205 Identities=11% Similarity=-0.024 Sum_probs=106.7
Q ss_pred EEEEeCCCEEEEE-ecCCeEEEEECCC----ceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182 238 YCLQYDDHKIVSG-LRDNTIKVWDRVS----LQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNT 309 (486)
Q Consensus 238 ~~~~~~~~~l~~~-~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~ 309 (486)
+++.+.+..|+.. ...+.|+.+++.. ......+.........|++ .++++++-...+.|.++++........
T Consensus 411 la~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l 490 (699)
T 1n7d_A 411 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL 490 (699)
T ss_dssp CEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEE
T ss_pred EccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEE
Confidence 3455555555554 3457888888765 2222222111112233444 344445545568899999875544433
Q ss_pred ecccCccEEEEEEcC--CeEEEEeC--CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--C-CCEEEEEeCCCcEEEE
Q psy9182 310 LIHHCEAVLHLRFSN--GMMVTCSK--DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D-EKYIVSASGDRTIKVW 382 (486)
Q Consensus 310 ~~~~~~~i~~~~~~~--~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~~d~~i~iw 382 (486)
+.........+++++ +.|+.+.. .+.|..+++....... .....-.....+++ + +.++++-...+.|..+
T Consensus 491 ~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~---l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~ 567 (699)
T 1n7d_A 491 FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 567 (699)
T ss_dssp CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE---ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE---EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEE
Confidence 333233445666654 34444432 2678877775433211 11111223334555 3 4455555567789999
Q ss_pred ECCCceEEEEEcC--CcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182 383 NTSSCEFVRTLNG--HKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 445 (486)
Q Consensus 383 d~~~~~~~~~~~~--~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~ 445 (486)
|+........+.. .......++++ +.++++....+.|..++..+|+.+..+.........|++
T Consensus 568 d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 568 DVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp CSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred ccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence 9865332222221 11222344444 444555556789999999888887777543333444444
No 306
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.69 E-value=0.33 Score=43.75 Aligned_cols=187 Identities=10% Similarity=0.229 Sum_probs=113.5
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe------cCC---EEEEEeC---CCcEEEEEC--CCCcEEE
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY------DER---VIISGSS---DSTVRVWDV--NTGEMVN 308 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~------~~~---~l~~~~~---dg~i~vwd~--~~~~~~~ 308 (486)
...+++.....+-+.+||+ +|+.++.+.. +.+..+.. .++ ++++... +++|.+|++ .+++ +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3455666667789999999 8888888864 34444433 333 2333333 478999966 4443 44
Q ss_pred Eecc------cC-ccEEEEEE--cC--C--eEEEEeCCCcEEEEECCC---CC-ceeeEEeeecCcccEEEEEe--CCCE
Q psy9182 309 TLIH------HC-EAVLHLRF--SN--G--MMVTCSKDRSIAVWDMVS---PN-EITLRRVLVGHRAAVNVVDF--DEKY 369 (486)
Q Consensus 309 ~~~~------~~-~~i~~~~~--~~--~--~l~~~~~dg~i~i~d~~~---~~-~~~~~~~~~~~~~~v~~~~~--~~~~ 369 (486)
.+.. .. ..+..+++ ++ + ++++...+|.+..|++.. +. .....+.+.. ...+..+.. ....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 4421 11 33444555 43 2 688888999999999843 21 1122222222 345555666 4578
Q ss_pred EEEEeCCCcEEEEECC-----CceEEEEEc-CCc-ccEEEEEe----CCC-EEEEEe-CCCcEEEEECC-CCeeeEEec
Q psy9182 370 IVSASGDRTIKVWNTS-----SCEFVRTLN-GHK-RGIACLQY----RDR-LVVSGS-SDNTIRLWDIE-CGACLRVLE 434 (486)
Q Consensus 370 l~~~~~d~~i~iwd~~-----~~~~~~~~~-~~~-~~v~~~~~----~~~-~l~~~~-~dg~v~iwd~~-~~~~~~~~~ 434 (486)
|+.+-.+.-|..+|.+ +++.+..+. ++- ..+..+.. +++ +|++++ .+++..+||.+ +.+.+..+.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 9999888777777755 355665553 222 24555555 233 666665 67899999996 677777773
No 307
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.68 E-value=0.7 Score=47.28 Aligned_cols=219 Identities=11% Similarity=0.134 Sum_probs=124.8
Q ss_pred eEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEec----
Q psy9182 237 VYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI---- 311 (486)
Q Consensus 237 v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---- 311 (486)
+.++.. ....|.+|+.+| +..||..+.+...........|.++..+...|..++.+ -+..+|..+++......
T Consensus 65 i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~ 142 (758)
T 3ott_A 65 IYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNG 142 (758)
T ss_dssp EEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHC
T ss_pred EEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCC
Confidence 444433 345778887665 78999887654331111223466665555567777776 58889987766443211
Q ss_pred ccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeec---CcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182 312 HHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG---HRAAVNVVDFD--EKYIVSASGDRTIKVWNTS 385 (486)
Q Consensus 312 ~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~ 385 (486)
.....|.++... .+.+.+|+.+ .+..||..+..... ...... ....|.++..+ +..|..|+. +-+..+|..
T Consensus 143 l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~ 219 (758)
T 3ott_A 143 LPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPS 219 (758)
T ss_dssp CSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETT
T ss_pred cCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCC
Confidence 123457777776 5677777765 57778876543211 110000 12347777664 455666664 458889988
Q ss_pred CceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecC-------cccCeEEEEecC-CEEEEEeCC
Q psy9182 386 SCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEG-------HEELVRCIRFDA-KRIVSGAYD 456 (486)
Q Consensus 386 ~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~-~~l~s~~~d 456 (486)
+++...........|.++..+ ...|..|+.+ -+.+++..+++....... ....|.++..|. ..|-.|+..
T Consensus 220 ~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~ 298 (758)
T 3ott_A 220 TGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDY 298 (758)
T ss_dssp TTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESS
T ss_pred CCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCC
Confidence 765432211123457777775 4456666654 578888876543322111 123588888743 345566666
Q ss_pred CcEEEE
Q psy9182 457 GKIKVW 462 (486)
Q Consensus 457 g~v~iw 462 (486)
| +.+.
T Consensus 299 G-l~~~ 303 (758)
T 3ott_A 299 G-ISLS 303 (758)
T ss_dssp S-EEEE
T ss_pred c-cccc
Confidence 6 5444
No 308
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.67 E-value=0.34 Score=43.55 Aligned_cols=212 Identities=10% Similarity=0.029 Sum_probs=116.6
Q ss_pred CCeEEEEECCCce--eeEEEcCCcccEEEEEec---CCEEEEEeCCCcEEEEECCCCcEE-EEecccCccEEEEEEc--C
Q psy9182 253 DNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGEMV-NTLIHHCEAVLHLRFS--N 324 (486)
Q Consensus 253 dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~i~~~~~~--~ 324 (486)
...|+..++.... ....+. ......++.|+ +.+.++-...+.|..+++..+... ..+.........+++. .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4578888887653 222222 22345677773 445555556788999998765321 1122212233445554 4
Q ss_pred C-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--CCCcEEEEECCCceEEEEEcCCccc
Q psy9182 325 G-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRG 399 (486)
Q Consensus 325 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~ 399 (486)
+ .+++-...+.|.++++....... ...........+++ .+..|+.+. ..+.|...++............-..
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~---l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~ 167 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKV---LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW 167 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEE---EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred CeEEEEECCCCEEEEEECCCCcEEE---EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 4 44455567889999987543221 11122334455555 345555555 2578888887643322222222334
Q ss_pred EEEEEeC--CCEE-EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE-EEEEeCCCcEEEEeCCCCC
Q psy9182 400 IACLQYR--DRLV-VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNLVAAL 468 (486)
Q Consensus 400 v~~~~~~--~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~~ 468 (486)
...++++ +..| ++-+..+.|..+|+..........+.......+++++.. +++-...+.|..++..++.
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 4566664 4544 444567889999987433322333334456677775544 4454556788888886554
No 309
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.59 E-value=0.16 Score=54.37 Aligned_cols=220 Identities=12% Similarity=0.141 Sum_probs=128.1
Q ss_pred EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCC-cEEEEeccc----
Q psy9182 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTG-EMVNTLIHH---- 313 (486)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~---- 313 (486)
++|..+.+|.-. ..++.|||+.+...++.+.- ...|.-..| +.+.|+..+. ..|+.|++... .+.+.+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~ 149 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLA 149 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEcC-CeEEEeccCCCCccHHHHhcchhcc
Confidence 455565555543 67899999999888877664 346777788 7777776664 46999999642 333333222
Q ss_pred CccEEEEEEcCC---eEEEEe------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC-----CEEEEEeC---C
Q psy9182 314 CEAVLHLRFSNG---MMVTCS------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-----KYIVSASG---D 376 (486)
Q Consensus 314 ~~~i~~~~~~~~---~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~---d 376 (486)
...|..-..+++ .+++|- -.|.+.+|..+.+.. +.+.||......+..+| ..++.+.. .
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s----Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc----hhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 334544444443 333332 357888888766432 44556666555555432 12222221 2
Q ss_pred CcEEEEECCCc---eEEE------EEcCC---cccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEE
Q psy9182 377 RTIKVWNTSSC---EFVR------TLNGH---KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 442 (486)
Q Consensus 377 ~~i~iwd~~~~---~~~~------~~~~~---~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 442 (486)
+.++|-++... .... .+-.. ..-..++..+ -..+..-+.-|.|.++|+.+|.++..-+-...+|..
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~ 305 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 305 (1630)
T ss_pred ceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEE
Confidence 68888887542 1111 00000 1111233333 456777888999999999999988766555555655
Q ss_pred EEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 443 IRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 443 ~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
.+. ...-++.....|.|.--.++.
T Consensus 306 ~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 306 TAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred eccCCCCCceEEEcCCceEEEEEEcc
Confidence 554 333455556677766555554
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.59 E-value=0.019 Score=58.08 Aligned_cols=157 Identities=11% Similarity=-0.002 Sum_probs=82.6
Q ss_pred EEEEeCC-CEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC--CCcEEEEECCCCcEEEEecc
Q psy9182 238 YCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS--DSTVRVWDVNTGEMVNTLIH 312 (486)
Q Consensus 238 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~ 312 (486)
+++.+.+ .++++-...+.|.+++.........+.........+++ .+..|+.+.. .+.|..+++........+..
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence 3444433 34444455678999987755433333322233445555 3344444332 26788887753322222222
Q ss_pred cCccEEEEEEcC--C-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEE-EEeCCCcEEEEECCCce
Q psy9182 313 HCEAVLHLRFSN--G-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV-SASGDRTIKVWNTSSCE 388 (486)
Q Consensus 313 ~~~~i~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~~~~d~~i~iwd~~~~~ 388 (486)
.-.....|++++ + ++++-...+.|..+|+.......... ..........+++++..|+ +....+.|..+|..+++
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC-CSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEE
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe-cCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCC
Confidence 223345677763 3 44455567789999987543221111 1111122334455444444 44556889999988888
Q ss_pred EEEEEcC
Q psy9182 389 FVRTLNG 395 (486)
Q Consensus 389 ~~~~~~~ 395 (486)
.+..+..
T Consensus 617 ~~~~i~~ 623 (699)
T 1n7d_A 617 DVNLLAE 623 (699)
T ss_dssp EEECCCT
T ss_pred ceEEeec
Confidence 7777653
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.43 E-value=0.84 Score=45.27 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=114.3
Q ss_pred ceEEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEe-CCCcEEEEECCCCcEEEEeccc
Q psy9182 236 GVYCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGS-SDSTVRVWDVNTGEMVNTLIHH 313 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~ 313 (486)
.-+++.++++.|+.+ ...+.|..+|+..........+......++++++..++.+. ..+.|...|..+++....+...
T Consensus 174 ~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~ 253 (619)
T 3s94_A 174 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSD 253 (619)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSC
T ss_pred cEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecC
Confidence 345666656665555 44567888888764443333322222345666555555554 4678888888776543322110
Q ss_pred C----------------------------c----------cEEEEEEc--------------CCeEEEEeCCCcEEEEEC
Q psy9182 314 C----------------------------E----------AVLHLRFS--------------NGMMVTCSKDRSIAVWDM 341 (486)
Q Consensus 314 ~----------------------------~----------~i~~~~~~--------------~~~l~~~~~dg~i~i~d~ 341 (486)
. + ...|.+.. +..++.-+..+.|+..++
T Consensus 254 ~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l 333 (619)
T 3s94_A 254 IFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISL 333 (619)
T ss_dssp CCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEES
T ss_pred CCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEec
Confidence 0 0 01111111 011222233456666666
Q ss_pred CCCCceeeEEeeecCcccEEEEEeC--CCEEEE-EeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC---CCEEEEEeC
Q psy9182 342 VSPNEITLRRVLVGHRAAVNVVDFD--EKYIVS-ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGSS 415 (486)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~ 415 (486)
.......... ....-..+.+++++ ++.|+. -...+.|+.+++........+.........++++ +++.++-+.
T Consensus 334 ~~~~~~~~~~-~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~ 412 (619)
T 3s94_A 334 DTPDFTDIVL-QLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTG 412 (619)
T ss_dssp SSTTCCCEEC-CCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT
T ss_pred CCCccceeEE-eccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCC
Confidence 5543211111 11112345677774 344444 4457788888887544333333322334445543 455666666
Q ss_pred CCcEEEEECCCCeeeEEecCcccCeEEEEecC--CEEEEEeC--CCcEEEEeCCCC
Q psy9182 416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAY--DGKIKVWNLVAA 467 (486)
Q Consensus 416 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~~~--dg~v~iwdl~~~ 467 (486)
.+.|.+.++........+...-....+|++|+ .+|.-+.. .+.|...+++..
T Consensus 413 ~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~ 468 (619)
T 3s94_A 413 TDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS 468 (619)
T ss_dssp TTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC
Confidence 78999999874433222233345677888842 34444432 355666666543
No 312
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.30 E-value=1 Score=44.72 Aligned_cols=317 Identities=10% Similarity=-0.010 Sum_probs=148.9
Q ss_pred ccccCCccCcceEE-EeecCceeeecccccccc-eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182 107 FISLLPNFDEKYIV-SASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT 184 (486)
Q Consensus 107 ~~~~~~s~~~~~l~-tg~~dg~v~iWd~~~~~~-~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~ 184 (486)
...+.+++.+..|. +-...+.|..+++..... ...+.........++++. ..+..+++-...+.
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~--------------~~~~ly~~d~~~~~ 107 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW--------------LGEKLYWTDSETNR 107 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEET--------------TTTEEEEEETTTTE
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe--------------cCCEEEEEeCCCCE
Confidence 44556666444444 444467787777765432 222332223456666651 02333444445566
Q ss_pred ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec--CCeEEEEECC
Q psy9182 185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR--DNTIKVWDRV 262 (486)
Q Consensus 185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~--dg~i~i~d~~ 262 (486)
|.+.+++...... +.........-+++.+.+..|+.... .+.|...++.
T Consensus 108 I~v~~~dG~~~~~-----------------------------l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 108 IEVSNLDGSLRKV-----------------------------LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp EEEEETTSCSCEE-----------------------------EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEEECCCCCEEE-----------------------------EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 7666653321110 00011122234556666555555543 3567666665
Q ss_pred CceeeEEEcCCcccEEEEEec--CCEEEEE-eCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEe-CCCcEEE
Q psy9182 263 SLQCIKVLTGHTGSVLCLQYD--ERVIISG-SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS-KDRSIAV 338 (486)
Q Consensus 263 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~-~dg~i~i 338 (486)
...........-.....+++| +..|+.+ ...+.|...|+..................+++.++.++.+. .++.|..
T Consensus 159 G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~ 238 (619)
T 3s94_A 159 GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILA 238 (619)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEE
T ss_pred CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEE
Confidence 433333333233445667664 4555555 44578999988644332222211222245566666555544 5677888
Q ss_pred EECCCCCceeeEEe--------eecCc---------------------------ccEEEEEeCC--------------C-
Q psy9182 339 WDMVSPNEITLRRV--------LVGHR---------------------------AAVNVVDFDE--------------K- 368 (486)
Q Consensus 339 ~d~~~~~~~~~~~~--------~~~~~---------------------------~~v~~~~~~~--------------~- 368 (486)
.|..+++....... ..-|. ....|.+..| .
T Consensus 239 ~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~ 318 (619)
T 3s94_A 239 CNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATE 318 (619)
T ss_dssp EESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSE
T ss_pred EECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCce
Confidence 88766543211100 00000 0111212111 1
Q ss_pred EEEEEeCCCcEEEEECCCceEE-EEEc-CCcccEEEEEeC--CCE-EEEEeCCCcEEEEECCCCeeeEEecCcccCeEEE
Q psy9182 369 YIVSASGDRTIKVWNTSSCEFV-RTLN-GHKRGIACLQYR--DRL-VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443 (486)
Q Consensus 369 ~l~~~~~d~~i~iwd~~~~~~~-~~~~-~~~~~v~~~~~~--~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~ 443 (486)
+|+.+ ..+.|+..++...... ..+. ..-..+..+.++ +.. +++-...+.|+.+++........+...-.....+
T Consensus 319 ~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~Gl 397 (619)
T 3s94_A 319 LLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 397 (619)
T ss_dssp EEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred EEEEE-cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCce
Confidence 23322 2345666666543221 1111 112345677775 344 4444457889888887543333333333455566
Q ss_pred Eec--CC-EEEEEeCCCcEEEEeCCCC
Q psy9182 444 RFD--AK-RIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 444 ~~~--~~-~l~s~~~dg~v~iwdl~~~ 467 (486)
++| +. ..++-+..+.|.+.+++..
T Consensus 398 AvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 398 AVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 663 44 4455456778988888755
No 313
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.27 E-value=0.61 Score=42.02 Aligned_cols=219 Identities=11% Similarity=0.015 Sum_probs=114.4
Q ss_pred EEEeCCCEEEEEecCCeEEEEECCCceeeEEEc---CCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe-ccc
Q psy9182 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT---GHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL-IHH 313 (486)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~ 313 (486)
.+.++++.+++++..|.|.. ....++--.... .+.+.+..+.+ ++..++.++.+|.|..- ...|+.-... ...
T Consensus 84 ~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~ 161 (327)
T 2xbg_A 84 SVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQEA 161 (327)
T ss_dssp EEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECSC
T ss_pred EEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecCC
Confidence 33344445555566665544 223333333322 23345666665 34444455556655332 2223322222 333
Q ss_pred CccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEE
Q psy9182 314 CEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFV 390 (486)
Q Consensus 314 ~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~ 390 (486)
...+..+.+.+ +.+++.+.+|.+..-+-..+...... .......+..+.+ ++. ++.++.+|.+++.+...++.-
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~-~~~~~~~G~~~~s~~D~G~tW 238 (327)
T 2xbg_A 162 IGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGR-LWMIVNGGKIAFSDPDNSENW 238 (327)
T ss_dssp CCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSC-EEEEETTTEEEEEETTEEEEE
T ss_pred CcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCC-EEEEeCCceEEEecCCCCCee
Confidence 45677888864 35555556666554331112322221 1233456666666 444 445567788877753334433
Q ss_pred EEEcC----CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeEEEEe-cCCEEEEEeCCCcEE
Q psy9182 391 RTLNG----HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRCIRF-DAKRIVSGAYDGKIK 460 (486)
Q Consensus 391 ~~~~~----~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~~-~~~~l~s~~~dg~v~ 460 (486)
..+.. +...+..+.+. +.+++ ++.+|.| .+....|+.-..+.. ....+.++.| ++..+++++.+|.|.
T Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~ 316 (327)
T 2xbg_A 239 GELLSPLRRNSVGFLDLAYRTPNEVWL-AGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILL 316 (327)
T ss_dssp CCCBCTTSSCCSCEEEEEESSSSCEEE-EESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEE
T ss_pred EeccCCcccCCcceEEEEecCCCEEEE-EeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEE
Confidence 33321 22347777774 44444 4557777 455555655554442 3456788888 677788888999887
Q ss_pred EEeC
Q psy9182 461 VWNL 464 (486)
Q Consensus 461 iwdl 464 (486)
-++-
T Consensus 317 ~~~~ 320 (327)
T 2xbg_A 317 RYVT 320 (327)
T ss_dssp EECC
T ss_pred EEcC
Confidence 7764
No 314
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.25 E-value=0.63 Score=41.94 Aligned_cols=175 Identities=9% Similarity=0.009 Sum_probs=89.3
Q ss_pred CCCEEEEEecCCeEEEEECCCceeeEE-EcCCcccEEEEEe--cCCEEEEEeCCCcEEE-EEC--CCCcEEEEecccCcc
Q psy9182 243 DDHKIVSGLRDNTIKVWDRVSLQCIKV-LTGHTGSVLCLQY--DERVIISGSSDSTVRV-WDV--NTGEMVNTLIHHCEA 316 (486)
Q Consensus 243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~v-wd~--~~~~~~~~~~~~~~~ 316 (486)
++..++ ++.+|.|..- ...++.-.. .......+..+.+ ++.+++++ .+|.+.. .|- .+.+.+. ......
T Consensus 132 ~~~~~~-~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~~ 206 (327)
T 2xbg_A 132 NGSAEM-ITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSRR 206 (327)
T ss_dssp TTEEEE-EETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEE-TTSSEEEEECTTCSSCEEEE--CCSSSC
T ss_pred CCCEEE-EeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEE-CCCcEEEEeCCCCCceeECC--CCCCCc
Confidence 444444 4456654332 222332222 2344556777777 45566555 4555544 342 2223332 233456
Q ss_pred EEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182 317 VLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT 392 (486)
Q Consensus 317 i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~ 392 (486)
+..+.+.+ +.+++++.+|.+++.+...++........ ......+..+.+ ++..++ ++.++.| .+..+.++.-..
T Consensus 207 ~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~-~g~~g~i-~~S~DgG~tW~~ 284 (327)
T 2xbg_A 207 LHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWL-AGGAGAL-LCSQDGGQTWQQ 284 (327)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEE-EESTTCE-EEESSTTSSCEE
T ss_pred cceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEE-EeCCCeE-EEeCCCCcccEE
Confidence 77777754 46777778888777642222221111110 012234677777 344444 4456766 344555554444
Q ss_pred EcC---CcccEEEEEe-CCCEEEEEeCCCcEEEEEC
Q psy9182 393 LNG---HKRGIACLQY-RDRLVVSGSSDNTIRLWDI 424 (486)
Q Consensus 393 ~~~---~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~ 424 (486)
+.. ....+..+.+ ++..+++++.+|.|.-++-
T Consensus 285 ~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 285 DVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp CGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred cCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 432 2345566666 4666778888998776653
No 315
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.18 E-value=0.32 Score=42.78 Aligned_cols=186 Identities=12% Similarity=0.085 Sum_probs=108.4
Q ss_pred cEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeec
Q psy9182 276 SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355 (486)
Q Consensus 276 ~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 355 (486)
.|..++......+.-. ||.|+.|-....-.+..-......|..++......++-. ||.|+.|-......+.. ...
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~---P~~ 99 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTV---PAE 99 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCC---CGG
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCC---Ccc
Confidence 4667777544444445 899999976532211111112345777777666444445 99999997654332211 111
Q ss_pred CcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC
Q psy9182 356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435 (486)
Q Consensus 356 ~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 435 (486)
-...|..++....+.+.-. +|.|+.|-....-.+..-......|..++......+.-. ||.|..|-....-.+..-..
T Consensus 100 ~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~ 177 (282)
T 3qhy_B 100 ARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAE 177 (282)
T ss_dssp GSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGG
T ss_pred cCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCcee
Confidence 1346777887666666666 999999976542211111122345777777655555555 89999997654222211111
Q ss_pred cccCeEEEEecC-CEEEEEeCCCcEEEEeCCCCCCC
Q psy9182 436 HEELVRCIRFDA-KRIVSGAYDGKIKVWNLVAALDP 470 (486)
Q Consensus 436 h~~~v~~~~~~~-~~l~s~~~dg~v~iwdl~~~~~~ 470 (486)
-...|..|+.-. ..++. .||.|..|--....+.
T Consensus 178 ~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 178 AQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp GGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTT
T ss_pred cCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCC
Confidence 235688888844 44554 5999999987654433
No 316
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.08 E-value=0.3 Score=49.32 Aligned_cols=188 Identities=11% Similarity=0.090 Sum_probs=103.9
Q ss_pred eCCCEEEEEecC----CeEEEEECCCceeeEEE-c-------CCcccEEEEEe--cCCEEEEEeCC------CcEEEEEC
Q psy9182 242 YDDHKIVSGLRD----NTIKVWDRVSLQCIKVL-T-------GHTGSVLCLQY--DERVIISGSSD------STVRVWDV 301 (486)
Q Consensus 242 ~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~-~-------~~~~~v~~~~~--~~~~l~~~~~d------g~i~vwd~ 301 (486)
.++..++.|+.+ ..+.+||..+++-...- . .....-.+... ++..++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 677888888754 46889998776533322 1 11112244555 77777777754 35889999
Q ss_pred CCCcEEEE--ecccCccEEEEEE-cCCeEEEEeCCC--cEEEEECCCCCceeeEE--eeecCcccEEEEEeC---CCEEE
Q psy9182 302 NTGEMVNT--LIHHCEAVLHLRF-SNGMMVTCSKDR--SIAVWDMVSPNEITLRR--VLVGHRAAVNVVDFD---EKYIV 371 (486)
Q Consensus 302 ~~~~~~~~--~~~~~~~i~~~~~-~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~--~~~~~~~~v~~~~~~---~~~l~ 371 (486)
.+.+.... +......-..+.+ .+..++.|+.++ .+.+||..+..-..... ..........++.++ +..++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 87654322 1111222233343 445666776544 68999988754221110 011111222223433 55666
Q ss_pred EEeC--C-----CcEEEEECCCce------EE--EEEc-CCcccEEEEEeC-CCEEEEEeC--------CCcEEEEECCC
Q psy9182 372 SASG--D-----RTIKVWNTSSCE------FV--RTLN-GHKRGIACLQYR-DRLVVSGSS--------DNTIRLWDIEC 426 (486)
Q Consensus 372 ~~~~--d-----~~i~iwd~~~~~------~~--~~~~-~~~~~v~~~~~~-~~~l~~~~~--------dg~v~iwd~~~ 426 (486)
.|+. + ..+.+||+.+.+ -. .... .......++..+ +.+++.|+. ...|.+||+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 6664 2 458899988766 11 1111 112233455566 788888874 35699999987
Q ss_pred Cee
Q psy9182 427 GAC 429 (486)
Q Consensus 427 ~~~ 429 (486)
.+-
T Consensus 636 ~~W 638 (695)
T 2zwa_A 636 ETL 638 (695)
T ss_dssp TEE
T ss_pred CeE
Confidence 653
No 317
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.08 E-value=1.3 Score=44.00 Aligned_cols=191 Identities=10% Similarity=-0.000 Sum_probs=110.2
Q ss_pred EEEEeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182 238 YCLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTLIHH 313 (486)
Q Consensus 238 ~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 313 (486)
+.+.+.+..++ +-..++.|..+++........+.........+++ .+ ++.++-...+.|.+.++........+...
T Consensus 42 l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~ 121 (628)
T 4a0p_A 42 LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKD 121 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSS
T ss_pred EEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCC
Confidence 44555455554 4456788988887765444444322223344444 34 45555555688999998754433333333
Q ss_pred CccEEEEEEcC--CeEEEEeC--CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCC
Q psy9182 314 CEAVLHLRFSN--GMMVTCSK--DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSS 386 (486)
Q Consensus 314 ~~~i~~~~~~~--~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~ 386 (486)
-.....+++++ +.|+.... .+.|...++......... ..-.....+++ +++.|+.+ ...+.|...|+..
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~----~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV----PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE----CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE----CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 45567888875 46665553 567888887655432211 23344556666 45555555 4567899999875
Q ss_pred ceEEEEEcCCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCeeeEEe
Q psy9182 387 CEFVRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVL 433 (486)
Q Consensus 387 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~ 433 (486)
... ..+.........++.++..|..+. ..+.|...|..+|+....+
T Consensus 198 ~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 198 LNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp CSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred Cce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEE
Confidence 433 333333334456666555555444 5788999998777654444
No 318
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.03 E-value=0.64 Score=40.03 Aligned_cols=192 Identities=9% Similarity=0.188 Sum_probs=114.1
Q ss_pred EEcCCcccEEEEEec--CC-EEEEEeCCCcEEEEECCCCcEEEEecc-cCccEEEEEEcC-CeEEEE-eCCCcEEEEECC
Q psy9182 269 VLTGHTGSVLCLQYD--ER-VIISGSSDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRFSN-GMMVTC-SKDRSIAVWDMV 342 (486)
Q Consensus 269 ~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~i~~~~~~~-~~l~~~-~~dg~i~i~d~~ 342 (486)
.+.+-...+..++++ ++ ++++...++.|...|.. ++.++.+.. .....-.+++.+ +.+++. -.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 344555678888884 44 55557778899999998 888877743 224566677754 344444 466788999887
Q ss_pred CCCceeeEEee------ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC---CceEEEEEc-------CCcccEEEEE
Q psy9182 343 SPNEITLRRVL------VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS---SCEFVRTLN-------GHKRGIACLQ 404 (486)
Q Consensus 343 ~~~~~~~~~~~------~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~-------~~~~~v~~~~ 404 (486)
....+...... .........+++ .++.|+++.......+|.+. ....+..+. .+......++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 65532111111 112334567777 45566666655444555443 111122221 1223456677
Q ss_pred eC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcc---------cCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182 405 YR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHE---------ELVRCIRF--DAKRIVSGAYDGKIKVWN 463 (486)
Q Consensus 405 ~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~---------~~v~~~~~--~~~~l~s~~~dg~v~iwd 463 (486)
++ +++++.....+.|.++|.. |+.+..+.-.. ..--.|+| +|+ |...++-+.++.+.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT 250 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence 75 6677777888899999976 66665553221 24568888 665 55557777666654
No 319
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.00 E-value=1.1 Score=42.30 Aligned_cols=223 Identities=10% Similarity=0.083 Sum_probs=113.6
Q ss_pred eEEEEeC--CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC-----cEEEEECCCCcE-
Q psy9182 237 VYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS-----TVRVWDVNTGEM- 306 (486)
Q Consensus 237 v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-----~i~vwd~~~~~~- 306 (486)
-+++.++ +..|+.+...+.|+.+|..+++...... .......+++ +++ |+.+...+ .+...+...+..
T Consensus 143 gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeec
Confidence 3455553 4566666555899999998877655443 3445667777 667 44444321 133333322111
Q ss_pred EEEecccCccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEE
Q psy9182 307 VNTLIHHCEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIK 380 (486)
Q Consensus 307 ~~~~~~~~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~ 380 (486)
...+. .......+++++ +.|+++ ..++.|+.+|..++......... +....-..+++ ++++|+.+ ...+.|+
T Consensus 221 ~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 221 RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 01111 122234455554 355544 45678999998766542111111 11122223555 77755554 4567899
Q ss_pred EEECC--CceE--EEEEcCC---------------cccEEEEEe---------C--CCEEEEEeCCCcEEEEECCCCeee
Q psy9182 381 VWNTS--SCEF--VRTLNGH---------------KRGIACLQY---------R--DRLVVSGSSDNTIRLWDIECGACL 430 (486)
Q Consensus 381 iwd~~--~~~~--~~~~~~~---------------~~~v~~~~~---------~--~~~l~~~~~dg~v~iwd~~~~~~~ 430 (486)
.++.. ++.. ...+.+. -.....+++ + +++.++-...+.|+.++. +|...
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT 377 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE
Confidence 98765 2321 1122111 112344555 3 455555556788999985 46443
Q ss_pred EEecCc------------------ccCeEEEEec--CCEEEEE-eCCCcEEEEeCC
Q psy9182 431 RVLEGH------------------EELVRCIRFD--AKRIVSG-AYDGKIKVWNLV 465 (486)
Q Consensus 431 ~~~~~h------------------~~~v~~~~~~--~~~l~s~-~~dg~v~iwdl~ 465 (486)
.+.+. -.....|+++ ...|+.+ ...+.|+.++++
T Consensus 378 -t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 378 -TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp -EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 33221 0125667774 3344444 345677777654
No 320
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.98 E-value=0.8 Score=40.71 Aligned_cols=207 Identities=9% Similarity=0.185 Sum_probs=123.6
Q ss_pred CeEEEEECCCceeeEEEc-CCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEe
Q psy9182 254 NTIKVWDRVSLQCIKVLT-GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS 331 (486)
Q Consensus 254 g~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~ 331 (486)
..|.|.|+.+........ .-... -+.+..+.++.-. ...+.++|+++.+.++.+... ..|....|- ++.++..+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~AdsA--IMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT 124 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISADSA--IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT 124 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCCSEE--EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE
T ss_pred CEEEEEECCCCCCcccccccccee--eeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc
Confidence 378889988755443221 11111 1233455555544 678999999999999888774 567777775 45555544
Q ss_pred CCCcEEEEECCCCCceeeEEeeecC----cccEEEEEe--CCCEEEEEe-------CCCcEEEEECCCceEEEEEcCCcc
Q psy9182 332 KDRSIAVWDMVSPNEITLRRVLVGH----RAAVNVVDF--DEKYIVSAS-------GDRTIKVWNTSSCEFVRTLNGHKR 398 (486)
Q Consensus 332 ~dg~i~i~d~~~~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~ 398 (486)
+..|+.|++.....+. +.+..| ...|..... +.++++..+ -.|.+.+|..+. +.-+.+++|..
T Consensus 125 -~taVyHWs~~~~s~P~--kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa 200 (365)
T 2xzh_A 125 -DNAVYHWSMEGESQPV--KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAA 200 (365)
T ss_dssp -SSEEEEEESSTTCCCE--EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEE
T ss_pred -CCcEEEEcccCCCCCc--eeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeee
Confidence 5689999997643322 333222 234444444 566665543 236788999875 44677888877
Q ss_pred cEEEEEeCCC-----EEEEEeC---CCcEEEEECCCC---e------eeEEecC---cccCeEEEEecC--CEEEEEeCC
Q psy9182 399 GIACLQYRDR-----LVVSGSS---DNTIRLWDIECG---A------CLRVLEG---HEELVRCIRFDA--KRIVSGAYD 456 (486)
Q Consensus 399 ~v~~~~~~~~-----~l~~~~~---dg~v~iwd~~~~---~------~~~~~~~---h~~~v~~~~~~~--~~l~s~~~d 456 (486)
.-..+..+|+ +++.+.. .+.++|-++... . .+..+.. ..+-.-++.... ..+..-..-
T Consensus 201 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~ 280 (365)
T 2xzh_A 201 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY 280 (365)
T ss_dssp EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETT
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCC
Confidence 6666666532 3333322 258888888432 1 1111111 123334555533 347777889
Q ss_pred CcEEEEeCCCCC
Q psy9182 457 GKIKVWNLVAAL 468 (486)
Q Consensus 457 g~v~iwdl~~~~ 468 (486)
|.|++||+.++.
T Consensus 281 G~ihlyDleTgt 292 (365)
T 2xzh_A 281 GYIHLYDLETGT 292 (365)
T ss_dssp SEEEEEETTTCC
T ss_pred cEEEEEEcccCc
Confidence 999999999764
No 321
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.73 E-value=1.1 Score=40.14 Aligned_cols=189 Identities=13% Similarity=0.128 Sum_probs=107.2
Q ss_pred cEEEEEec--CCEEEEEe-CCCcEEEEECCCCcEEEEeccc-------CccEEEEEE---cC-CeEEEEeC---------
Q psy9182 276 SVLCLQYD--ERVIISGS-SDSTVRVWDVNTGEMVNTLIHH-------CEAVLHLRF---SN-GMMVTCSK--------- 332 (486)
Q Consensus 276 ~v~~~~~~--~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~-------~~~i~~~~~---~~-~~l~~~~~--------- 332 (486)
.-.+..|+ ...+..++ ..|+|..||...+......... ...+..+.+ .+ +.|++...
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 34567774 24555554 7899999999866544332211 113578888 33 44444332
Q ss_pred -----CCcEEEEECC---CCCceeeEEeee---c-------CcccEEEEEe--CCCEEEEEeCC-CcEEEEECCCceEEE
Q psy9182 333 -----DRSIAVWDMV---SPNEITLRRVLV---G-------HRAAVNVVDF--DEKYIVSASGD-RTIKVWNTSSCEFVR 391 (486)
Q Consensus 333 -----dg~i~i~d~~---~~~~~~~~~~~~---~-------~~~~v~~~~~--~~~~l~~~~~d-~~i~iwd~~~~~~~~ 391 (486)
+..|..||+. +++......... + .......+.. +|+..++++.. +.|...+.... .+.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 6789999998 665543222100 1 1123556666 78888888887 88888886643 233
Q ss_pred EEc--C----CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCee--eEEe-cCc------ccCeEEEEecCCE-EEEE
Q psy9182 392 TLN--G----HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC--LRVL-EGH------EELVRCIRFDAKR-IVSG 453 (486)
Q Consensus 392 ~~~--~----~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~--~~~~-~~h------~~~v~~~~~~~~~-l~s~ 453 (486)
.+. . .....+.+.+ +++.|++...+|.+..+|+.+... +..- .+. ...+..+..+|+. |++.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEc
Confidence 221 1 1112345555 588888887799999999885332 2111 021 1222223347877 5555
Q ss_pred eCCCcEEEEeCC
Q psy9182 454 AYDGKIKVWNLV 465 (486)
Q Consensus 454 ~~dg~v~iwdl~ 465 (486)
+..+.+.+.+-+
T Consensus 253 ~~~~~~~l~S~D 264 (334)
T 2p9w_A 253 RAPYAISFRSWD 264 (334)
T ss_dssp ETTEEEEEECSS
T ss_pred CCCCEEEEECCC
Confidence 566666665544
No 322
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.66 E-value=0.93 Score=39.00 Aligned_cols=185 Identities=12% Similarity=0.139 Sum_probs=105.9
Q ss_pred EEEEeCCCE-EEEEecCCeEEEEECCCceeeEEEcC-CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE---EEEe
Q psy9182 238 YCLQYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM---VNTL 310 (486)
Q Consensus 238 ~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~---~~~~ 310 (486)
+++.++++. +++...++.|...|.. ++.++.+.- -....-.+++ ++.++++.-.++.+.++++..... +...
T Consensus 32 la~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~ 110 (255)
T 3qqz_A 32 LTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKI 110 (255)
T ss_dssp EEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred eEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence 445555554 5557788899999988 888877642 1234566666 455555555677899998765432 2222
Q ss_pred c------ccCccEEEEEEcCC--eEEEEeCCCcEEEEECCC---CCceeeEEe--e--ecCcccEEEEEe---CCCEEEE
Q psy9182 311 I------HHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVS---PNEITLRRV--L--VGHRAAVNVVDF---DEKYIVS 372 (486)
Q Consensus 311 ~------~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~---~~~~~~~~~--~--~~~~~~v~~~~~---~~~~l~~ 372 (486)
. ........+++++. .|+++.......+|.+.. ......... + ..+.....++++ .+++++.
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEE
Confidence 1 12334578888754 677666655555555541 111111110 0 011223455666 5667777
Q ss_pred EeCCCcEEEEECCCceEEEEEcCCc---------ccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182 373 ASGDRTIKVWNTSSCEFVRTLNGHK---------RGIACLQYR--DRLVVSGSSDNTIRLWDIE 425 (486)
Q Consensus 373 ~~~d~~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~~--~~~l~~~~~dg~v~iwd~~ 425 (486)
...+..|..+|.. ++.+..+.-.. ..--.++++ |+ |...++.+.+++|.-.
T Consensus 191 S~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 191 SHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp ETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC-
T ss_pred ECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEec
Confidence 7788889999966 55655554221 133556664 66 4444777777776543
No 323
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=95.63 E-value=1.4 Score=40.83 Aligned_cols=231 Identities=11% Similarity=0.132 Sum_probs=134.3
Q ss_pred eEEEEeCCCEEEEEecCCeEEEEECCCc-----------eeeEEEcC-CcccE--EEEEecCCEEEEEeCCCcEEEEECC
Q psy9182 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSL-----------QCIKVLTG-HTGSV--LCLQYDERVIISGSSDSTVRVWDVN 302 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~-----------~~~~~~~~-~~~~v--~~~~~~~~~l~~~~~dg~i~vwd~~ 302 (486)
+..++......++-..||.|..|-.... .....+.. ....+ ..++......++-..||.|+.|-..
T Consensus 55 i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n 134 (389)
T 3kci_A 55 PVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 134 (389)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECC
T ss_pred eEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCC
Confidence 4445556667777788999999953321 11111221 11223 3444456677777889999999643
Q ss_pred CC-----------cEEEEecc-cCccEEEEEEcCCeEEEEeCCCcEEEEECCCC---------CceeeEEeeecCcccEE
Q psy9182 303 TG-----------EMVNTLIH-HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSP---------NEITLRRVLVGHRAAVN 361 (486)
Q Consensus 303 ~~-----------~~~~~~~~-~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~~~v~ 361 (486)
.. .....+.. ....|..++......++...+|.|+.|-.... ...............+.
T Consensus 135 ~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 135 EDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEE
T ss_pred CCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEE
Confidence 21 11112221 22368888888888888889999999965321 11111111111233566
Q ss_pred EEEeC--CCEEEEEeCCCcEEEEECCCc-----------eEEEEEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCCC
Q psy9182 362 VVDFD--EKYIVSASGDRTIKVWNTSSC-----------EFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 427 (486)
Q Consensus 362 ~~~~~--~~~l~~~~~d~~i~iwd~~~~-----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~ 427 (486)
.++.. ..+.+.-..||.|+.|-.... .....+.. ....|..++......++-..||.|+.|=....
T Consensus 215 ~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~ 294 (389)
T 3kci_A 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 294 (389)
T ss_dssp EEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGG
T ss_pred EEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCC
Confidence 66653 366677778999999964321 11122222 22357777777777777789999999975321
Q ss_pred -----------eeeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182 428 -----------ACLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 428 -----------~~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.....+.. ....|..|+.-....+....||.|..|-....
T Consensus 295 GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 295 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp GTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCTT
T ss_pred CCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCCC
Confidence 01112221 12357888885566666688999999987653
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.47 E-value=0.83 Score=46.10 Aligned_cols=185 Identities=10% Similarity=0.088 Sum_probs=104.0
Q ss_pred ecCCEEEEEeCC----CcEEEEECCCCcEEEEe-c-------ccCccEEEEEE--cCCeEEEEeCC------CcEEEEEC
Q psy9182 282 YDERVIISGSSD----STVRVWDVNTGEMVNTL-I-------HHCEAVLHLRF--SNGMMVTCSKD------RSIAVWDM 341 (486)
Q Consensus 282 ~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~-~-------~~~~~i~~~~~--~~~~l~~~~~d------g~i~i~d~ 341 (486)
.++..++.|+.+ ..+.+||..+++....- . .....-..+.+ .+..++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 577788888753 46889999887654332 1 11122344445 34456666543 35788998
Q ss_pred CCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCC--cEEEEECCCceEEEEE-----cCCcccEEEEEeC---CCEE
Q psy9182 342 VSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDR--TIKVWNTSSCEFVRTL-----NGHKRGIACLQYR---DRLV 410 (486)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~--~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~---~~~l 410 (486)
.+..-.. ..........-.++.+ ++..++.|+.++ .+.+||..+.+-...- ........++.++ +.++
T Consensus 476 ~t~~W~~-~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSM-IKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEE-CCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEE-CCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 7753221 1112222333344554 788888887654 6999999886543221 1111122334444 5677
Q ss_pred EEEeC--C-----CcEEEEECCCCee-----eEEec----CcccCeEEEEec-CCEEEEEeCC--------CcEEEEeCC
Q psy9182 411 VSGSS--D-----NTIRLWDIECGAC-----LRVLE----GHEELVRCIRFD-AKRIVSGAYD--------GKIKVWNLV 465 (486)
Q Consensus 411 ~~~~~--d-----g~v~iwd~~~~~~-----~~~~~----~h~~~v~~~~~~-~~~l~s~~~d--------g~v~iwdl~ 465 (486)
+.|+. + +.+.+||+.+.+- -..+. .......++.++ +..++.||.+ ..|.+||+.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 77765 2 4588999987661 11221 111233445556 7878888743 458899987
Q ss_pred CC
Q psy9182 466 AA 467 (486)
Q Consensus 466 ~~ 467 (486)
+.
T Consensus 635 t~ 636 (695)
T 2zwa_A 635 SE 636 (695)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 325
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=95.45 E-value=1.7 Score=40.72 Aligned_cols=231 Identities=9% Similarity=0.047 Sum_probs=139.7
Q ss_pred ceEEEEeCCCEEEEEecCCeEEEEECCC-ce------------eeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEEC-
Q psy9182 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVS-LQ------------CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV- 301 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~~------------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~- 301 (486)
.+..++..+...++-..||.|+.|-... ++ ....+. ....|..++......++-..||.|+.|-.
T Consensus 76 ~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G~~hs~al~~~G~v~~wG~~ 154 (423)
T 3mvd_K 76 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAGDSHSACLLEDGRVFAWGSF 154 (423)
T ss_dssp SEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEECSSEEEEEETTSCEEEEECE
T ss_pred CceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcCcCeEEEEeCCCeEEEEeCC
Confidence 3567777778888888999999995432 10 011111 23467788886677777788999999975
Q ss_pred -C-CCcE---------EEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc--------------------eeeE
Q psy9182 302 -N-TGEM---------VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE--------------------ITLR 350 (486)
Q Consensus 302 -~-~~~~---------~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------------------~~~~ 350 (486)
. .+++ ..........|..++......++-..+|.|+.|-...... ....
T Consensus 155 ~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~ 234 (423)
T 3mvd_K 155 RDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPT 234 (423)
T ss_dssp ECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCE
T ss_pred CCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCe
Confidence 2 2221 1111223456888888788888888999999996432111 0111
Q ss_pred EeeecCcccEEEEEeCCCEEEEE-eCCCcEEEEECCC-----------ceEEEEEcCCcccEEEEEeCCCEEEEEeCCCc
Q psy9182 351 RVLVGHRAAVNVVDFDEKYIVSA-SGDRTIKVWNTSS-----------CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 418 (486)
Q Consensus 351 ~~~~~~~~~v~~~~~~~~~l~~~-~~d~~i~iwd~~~-----------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~ 418 (486)
.........|..+.......+.. ..++.|+.|-... .............|..++......+.-..||.
T Consensus 235 ~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~~ht~alt~~G~ 314 (423)
T 3mvd_K 235 QLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLK 314 (423)
T ss_dssp EECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECSSEEEEEETTCC
T ss_pred EEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcccCeEEEEeCCCc
Confidence 11122233455665544443333 6889999996432 11111111124567788887777778889999
Q ss_pred EEEEECCCC------------eeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182 419 IRLWDIECG------------ACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 419 v~iwd~~~~------------~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
|+.|=.... .....+..-...|..|+.-...-+.-..||.|+.|=....
T Consensus 315 v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 315 CSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVN 375 (423)
T ss_dssp EEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCTT
T ss_pred EEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCCC
Confidence 999965321 1122233333368888885555555578999999986553
No 326
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=95.20 E-value=2 Score=40.00 Aligned_cols=233 Identities=10% Similarity=0.143 Sum_probs=140.1
Q ss_pred ccceEEEEeCCCEEEEEecCCeEEEEECCC-c----------eeeEEEcC-CcccEEEEEecCCEEEEEeCC-CcEEEEE
Q psy9182 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVS-L----------QCIKVLTG-HTGSVLCLQYDERVIISGSSD-STVRVWD 300 (486)
Q Consensus 234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d-g~i~vwd 300 (486)
...+..++......++-..+|.|+.|-... + .....+.. ....|..++....+.++-..+ +.|+.|-
T Consensus 15 ~~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG 94 (406)
T 4d9s_A 15 PRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWG 94 (406)
T ss_dssp CCCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEE
T ss_pred ccceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEc
Confidence 345667777777878888899999995432 1 11112221 223678888765555555555 5899995
Q ss_pred CCCC---------cEE--EEec-ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc---------eeeEEeeecCccc
Q psy9182 301 VNTG---------EMV--NTLI-HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE---------ITLRRVLVGHRAA 359 (486)
Q Consensus 301 ~~~~---------~~~--~~~~-~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~ 359 (486)
.... ... ..+. .....|..++......++-..+|.|+.|-...... .............
T Consensus 95 ~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~ 174 (406)
T 4d9s_A 95 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR 174 (406)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCC
T ss_pred CCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCc
Confidence 4321 111 1111 12336888888788888889999999997543211 1111111112236
Q ss_pred EEEEEeCCCEEEEEeCCCcEEEEECCCc----------e-EEEEEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCCC
Q psy9182 360 VNVVDFDEKYIVSASGDRTIKVWNTSSC----------E-FVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 427 (486)
Q Consensus 360 v~~~~~~~~~l~~~~~d~~i~iwd~~~~----------~-~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~ 427 (486)
|..++....+.+.-..+|.|+.|-.... . ....+.. ....+..++......+.-..+|.|+.|-....
T Consensus 175 i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~ 254 (406)
T 4d9s_A 175 IKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 254 (406)
T ss_dssp EEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSSEEEEEETTCCEEEEECCTT
T ss_pred EEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCCcEEEEcCCCCEEEeeCCCC
Confidence 7777777777777789999999964321 1 1111221 22467777777777778889999999975321
Q ss_pred e-----------eeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEeCCC
Q psy9182 428 A-----------CLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 428 ~-----------~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~ 466 (486)
- ....+.. ....|..|+.-....+.-..||.|..|--..
T Consensus 255 GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~ 305 (406)
T 4d9s_A 255 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 305 (406)
T ss_dssp STTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred CCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCC
Confidence 1 1111211 1235778887656666667899999997654
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.85 E-value=2.5 Score=39.28 Aligned_cols=209 Identities=8% Similarity=0.144 Sum_probs=124.8
Q ss_pred CCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEe
Q psy9182 253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS 331 (486)
Q Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~ 331 (486)
+..|.|.|+.++..+....- ...---+.+..+.++.-. ..++.++|+++.+.+..+.... .|....|- ++.++..
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi-~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lV- 122 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI-SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV- 122 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC-CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEE-
T ss_pred CCeEEEEECCCCCcceeccc-ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEE-
Confidence 34789999887554432211 111111233444444443 6789999999999998887754 46566664 5555554
Q ss_pred CCCcEEEEECCCCCceeeEEeeecC----cccEEEEEe--CCCEEEEEe-------CCCcEEEEECCCceEEEEEcCCcc
Q psy9182 332 KDRSIAVWDMVSPNEITLRRVLVGH----RAAVNVVDF--DEKYIVSAS-------GDRTIKVWNTSSCEFVRTLNGHKR 398 (486)
Q Consensus 332 ~dg~i~i~d~~~~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~ 398 (486)
.+..|+-|++.....+. +.+..| ...|..... +.++++..+ -.|.+.+|..+. +.-+.+++|..
T Consensus 123 T~taVyHWsi~~~s~P~--kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa 199 (494)
T 1bpo_A 123 TDNAVYHWSMEGESQPV--KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAA 199 (494)
T ss_dssp CSSEEEEEESSSSCCCE--EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEE
T ss_pred cCCeeEEecccCCCCch--hheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeee
Confidence 46689999997643322 333322 234444443 566665443 246788999875 44677888887
Q ss_pred cEEEEEeCCC-----EEEEEeC---CCcEEEEECCCC---e-----eeEEe-c---CcccCeEEEEe--cCCEEEEEeCC
Q psy9182 399 GIACLQYRDR-----LVVSGSS---DNTIRLWDIECG---A-----CLRVL-E---GHEELVRCIRF--DAKRIVSGAYD 456 (486)
Q Consensus 399 ~v~~~~~~~~-----~l~~~~~---dg~v~iwd~~~~---~-----~~~~~-~---~h~~~v~~~~~--~~~~l~s~~~d 456 (486)
.-..+..+|+ +++.+.. .+.++|-++... . ....+ . ...+-..++.. .-..+..-..-
T Consensus 200 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~ 279 (494)
T 1bpo_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY 279 (494)
T ss_dssp EEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETT
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecC
Confidence 7777776542 3444443 278899888432 1 11111 1 11233345555 33447777889
Q ss_pred CcEEEEeCCCCC
Q psy9182 457 GKIKVWNLVAAL 468 (486)
Q Consensus 457 g~v~iwdl~~~~ 468 (486)
|.|++||+.++.
T Consensus 280 G~i~lyDleTgt 291 (494)
T 1bpo_A 280 GYIHLYDLETGT 291 (494)
T ss_dssp SEEEEEETTTCC
T ss_pred ceEEEEecccce
Confidence 999999999764
No 328
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.54 E-value=4.1 Score=40.40 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=48.0
Q ss_pred CCCcEEEEECCCceEEEEEcC------CcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEE
Q psy9182 375 GDRTIKVWNTSSCEFVRTLNG------HKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIR 444 (486)
Q Consensus 375 ~d~~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~ 444 (486)
..+.|+.++.........+.. .......++++ +++.++-+..+.|.+.++. |+....+ ........+|+
T Consensus 360 ~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~ia 438 (628)
T 4a0p_A 360 RQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVV 438 (628)
T ss_dssp TTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEE
T ss_pred CcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEE
Confidence 345566666543222222221 12245566664 3455666678899999986 5544443 33445678888
Q ss_pred ecC--CE-EEEEeCCC--cEEEEeCCCC
Q psy9182 445 FDA--KR-IVSGAYDG--KIKVWNLVAA 467 (486)
Q Consensus 445 ~~~--~~-l~s~~~dg--~v~iwdl~~~ 467 (486)
+++ .+ +++-.... .|...+++..
T Consensus 439 vdp~~g~ly~tD~g~~~~~I~r~~~dG~ 466 (628)
T 4a0p_A 439 VNPEKGYMYFTNLQERSPKIERAALDGT 466 (628)
T ss_dssp EETTTTEEEEEEEETTEEEEEEEETTSC
T ss_pred EecCCCeEEEeecCCCCCeEEEEeCCCC
Confidence 842 33 33332222 4555555543
No 329
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=94.18 E-value=3.5 Score=38.10 Aligned_cols=191 Identities=9% Similarity=0.151 Sum_probs=113.8
Q ss_pred ceEEEEeCCCEEEEEecCCeEEEEECCC-----------ceeeEEEcC-CcccEEEEEecCCEEEEEeCCCcEEEEECCC
Q psy9182 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVS-----------LQCIKVLTG-HTGSVLCLQYDERVIISGSSDSTVRVWDVNT 303 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~-----------~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~ 303 (486)
.+..++......++-..||.|+.|-... ......+.. ....|..++......++-..+|.|+.|-...
T Consensus 108 ~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~ 187 (389)
T 3kci_A 108 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 187 (389)
T ss_dssp EEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCG
T ss_pred eEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCC
Confidence 3445555666777778899999995422 111122221 2236788888777777788899999996532
Q ss_pred -C--------cE--EEEec-ccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCc---------eeeEEeeecCcccE
Q psy9182 304 -G--------EM--VNTLI-HHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNE---------ITLRRVLVGHRAAV 360 (486)
Q Consensus 304 -~--------~~--~~~~~-~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~v 360 (486)
+ .. ...+. .....+..++... ...++-..+|.|+.|-...... .............|
T Consensus 188 ~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v 267 (389)
T 3kci_A 188 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 267 (389)
T ss_dssp GGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCE
T ss_pred CCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcE
Confidence 1 11 11111 1234577777653 5677778899999996432110 11111111122346
Q ss_pred EEEEeCCCEEEEEeCCCcEEEEECCCc-----------eEEEEEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182 361 NVVDFDEKYIVSASGDRTIKVWNTSSC-----------EFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 426 (486)
Q Consensus 361 ~~~~~~~~~l~~~~~d~~i~iwd~~~~-----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~ 426 (486)
..++....+.++-..+|.|+.|-.... .....+.. ....|..++......++-..||.|+.|=...
T Consensus 268 ~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 268 VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCT
T ss_pred EEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCC
Confidence 777776677677788999999975321 11122222 2245778887777777778999999997653
No 330
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=93.75 E-value=4.8 Score=38.29 Aligned_cols=232 Identities=10% Similarity=0.076 Sum_probs=140.6
Q ss_pred ccceEEEEeCCCEEEEEecCCeEEEEECCCce----------------------------------eeEEEcC-------
Q psy9182 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ----------------------------------CIKVLTG------- 272 (486)
Q Consensus 234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------------------------------~~~~~~~------- 272 (486)
...+..++..+...++-..+|.|+.|-....- ....+..
T Consensus 66 ~~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~ 145 (473)
T 3of7_A 66 EAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLA 145 (473)
T ss_dssp TTCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHH
T ss_pred CCCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCccc
Confidence 34677777778888888889999999542210 0011111
Q ss_pred CcccEEEEEecCCEEEEEeCCCcEEEEECC---CCcE------------EEEec-ccCccEEEEEEcCCeEEEEeCCCcE
Q psy9182 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVN---TGEM------------VNTLI-HHCEAVLHLRFSNGMMVTCSKDRSI 336 (486)
Q Consensus 273 ~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~------------~~~~~-~~~~~i~~~~~~~~~l~~~~~dg~i 336 (486)
....|..++......++-..+|.|+.|-.. .+++ ...+. .....|..++......++-..+|.|
T Consensus 146 ~~~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v 225 (473)
T 3of7_A 146 EGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMV 225 (473)
T ss_dssp TTCCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCE
T ss_pred CCCcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeE
Confidence 125677888877777777889999999751 1111 11111 1123488888888888888899999
Q ss_pred EEEECCCCCceee----------EEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCC-c-----------eE---EE
Q psy9182 337 AVWDMVSPNEITL----------RRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS-C-----------EF---VR 391 (486)
Q Consensus 337 ~i~d~~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~-~-----------~~---~~ 391 (486)
+.|-......+-. .....-....|..++......++-..+|.|+.|-... + .. ..
T Consensus 226 ~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~ 305 (473)
T 3of7_A 226 FAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPK 305 (473)
T ss_dssp EEEECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEE
T ss_pred EEEeCCCCCCCCCCccccccccccCceecCCcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccc
Confidence 9996543211100 0000001145777777777777777899999996432 1 11 11
Q ss_pred EEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCC-Ce-------------------e-----eEEecCcccCeEEEEe
Q psy9182 392 TLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIEC-GA-------------------C-----LRVLEGHEELVRCIRF 445 (486)
Q Consensus 392 ~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~-~~-------------------~-----~~~~~~h~~~v~~~~~ 445 (486)
.+.. ....|..++......++-..||.|+.|=... ++ . ...+. ....|..|+.
T Consensus 306 ~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~-~~~~v~~Ia~ 384 (473)
T 3of7_A 306 RLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLN-NVPKFKSVAA 384 (473)
T ss_dssp ECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECC-SSCCEEEEEE
T ss_pred cccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccC-CCCceEEEEe
Confidence 1121 2245777887777777778899999996532 11 0 01111 1126778888
Q ss_pred cCCEEEEEeCCCcEEEEeCCC
Q psy9182 446 DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 446 ~~~~l~s~~~dg~v~iwdl~~ 466 (486)
-....+.-..||.|..|-...
T Consensus 385 G~~hs~al~~~G~vy~wG~n~ 405 (473)
T 3of7_A 385 GSHHSVAVAQNGIAYSWGFGE 405 (473)
T ss_dssp CSSEEEEEETTSCEEEEECCT
T ss_pred CCCeEEEEeCCCcEEEeeCCC
Confidence 666666667899999998654
No 331
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=93.59 E-value=4.7 Score=37.57 Aligned_cols=229 Identities=10% Similarity=0.090 Sum_probs=141.0
Q ss_pred cceEEEEeCCCEEEEEecCCeEEEEECCCc-e------------eeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEEC
Q psy9182 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSL-Q------------CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301 (486)
Q Consensus 235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~-~------------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~ 301 (486)
..+..++......++-..||.|+.|-.... + ....+. -...|..++......++-..||.|+.|-.
T Consensus 59 ~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-l~~~i~~va~G~~hs~alt~~G~v~~wG~ 137 (413)
T 1a12_A 59 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGS 137 (413)
T ss_dssp SCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECC-CCSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEec-CCCcEEEEecCCCeEEEEcCCCcEEEeeC
Confidence 456667777777777888999999964321 0 011111 13467888887777777788999999974
Q ss_pred --CC-CcE-----------EEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCce--------------------
Q psy9182 302 --NT-GEM-----------VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEI-------------------- 347 (486)
Q Consensus 302 --~~-~~~-----------~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-------------------- 347 (486)
.. +++ ...+ .....|..++......++-..+|.|+.|=......+
T Consensus 138 ~~n~~GqlG~~~~~~~~~~P~~v-~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~ 216 (413)
T 1a12_A 138 FRDNNGVIGLLEPMKKSMVPVQV-QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 216 (413)
T ss_dssp EEETTEEEESSBBTBCEEEEEEE-CCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHH
T ss_pred CcCCCCccCcCCccccccCCEEe-cCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccc
Confidence 21 111 1111 234567788877778888889999999975432111
Q ss_pred eeEEeeec-----CcccEEEEEeCCCEEEEEeCCCcEEEEECCCc-e----------EEEEEcCC---cccEEEEEeCCC
Q psy9182 348 TLRRVLVG-----HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC-E----------FVRTLNGH---KRGIACLQYRDR 408 (486)
Q Consensus 348 ~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~-~----------~~~~~~~~---~~~v~~~~~~~~ 408 (486)
.+...... ....|..++....+.++-..+|.|+.|-.... + ....+... ...|..++....
T Consensus 217 ~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~~ 296 (413)
T 1a12_A 217 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH 296 (413)
T ss_dssp SCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSS
T ss_pred cCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecccc
Confidence 00000000 23457777776667677778999999975431 0 11122211 134777887777
Q ss_pred EEEEEeCCCcEEEEECCC------C-----e-eeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCC
Q psy9182 409 LVVSGSSDNTIRLWDIEC------G-----A-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 409 ~l~~~~~dg~v~iwd~~~------~-----~-~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~ 466 (486)
..++-..||.|+.|=... + . ....+.. ...|..|+.-....+.-..||.|..|-...
T Consensus 297 hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~-l~~v~~v~~G~~hs~alt~~G~v~~wG~n~ 365 (413)
T 1a12_A 297 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR-LPAVSSVACGASVGYAVTKDGRVFAWGMGT 365 (413)
T ss_dssp EEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCS-SSSEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred eEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecc-cCceeEEEECcceEEEEeCCCCEEEecCCC
Confidence 777778899999996532 1 0 1112222 237888888666666667899999998654
No 332
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.50 E-value=4.4 Score=37.98 Aligned_cols=144 Identities=10% Similarity=0.066 Sum_probs=79.7
Q ss_pred EEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC-C----cEEEEECCC
Q psy9182 317 VLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD-R----TIKVWNTSS 386 (486)
Q Consensus 317 i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-~----~i~iwd~~~ 386 (486)
...+++++ +.|+++...+.|+.+|+..+.... +.........+++ ++++|+++... + .+..++. .
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~----~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST----VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE----EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE----EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence 34566664 456666555788888887654321 1123344556666 67766666542 2 2333443 2
Q ss_pred ceEE--EEEc--CCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEEEe--cCCEEEEE-eCCC
Q psy9182 387 CEFV--RTLN--GHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF--DAKRIVSG-AYDG 457 (486)
Q Consensus 387 ~~~~--~~~~--~~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~s~-~~dg 457 (486)
+... ..+. .|... .++.. ++.++++-..++.|..++...+........ .......|++ ++++|+.+ ...+
T Consensus 214 g~~~~~~~l~~~~~p~g-iavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNG-AETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp GTSCSEEEEEECSSCCC-EEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred CceeeeeeeccCCCceE-EEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 2221 2222 12222 22333 456666666788999999987664222221 2234678888 77855444 4677
Q ss_pred cEEEEeCCC
Q psy9182 458 KIKVWNLVA 466 (486)
Q Consensus 458 ~v~iwdl~~ 466 (486)
.|..++.+.
T Consensus 293 ~I~~~~~d~ 301 (430)
T 3tc9_A 293 YILRSDYDW 301 (430)
T ss_dssp EEEEEEEET
T ss_pred EEEEEeCCc
Confidence 899988764
No 333
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.43 E-value=5.5 Score=37.94 Aligned_cols=229 Identities=10% Similarity=0.076 Sum_probs=121.8
Q ss_pred ceEEEEe-CCCEEEEE-ecCCeEEEEECCCceeeEEEcCC---cccEEEEEe---------cCCEEEEEeCCC-------
Q psy9182 236 GVYCLQY-DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGH---TGSVLCLQY---------DERVIISGSSDS------- 294 (486)
Q Consensus 236 ~v~~~~~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~---~~~v~~~~~---------~~~~l~~~~~dg------- 294 (486)
.-+++.| ++..|+++ ...+.|++.|..++......... ......+++ +++.|+++...+
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~ 221 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP 221 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence 3456666 34444444 44467999999888776655432 224667766 577666666554
Q ss_pred cEEEEECCC-CcEE-----EEecccCccEEEEEEcC--C-eEEEEeCCCcEEEEECC-------CCCc-----------e
Q psy9182 295 TVRVWDVNT-GEMV-----NTLIHHCEAVLHLRFSN--G-MMVTCSKDRSIAVWDMV-------SPNE-----------I 347 (486)
Q Consensus 295 ~i~vwd~~~-~~~~-----~~~~~~~~~i~~~~~~~--~-~l~~~~~dg~i~i~d~~-------~~~~-----------~ 347 (486)
.|.+++... +... ..+.. ......++.++ + ++++-..++.|..+|+. ++.. .
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~ 300 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF 300 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred eEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence 266776443 1211 12211 11233455655 3 44555677889999987 4443 1
Q ss_pred eeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEEC--CCceE--EEEEcCC---c------------ccEE-EEE
Q psy9182 348 TLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNT--SSCEF--VRTLNGH---K------------RGIA-CLQ 404 (486)
Q Consensus 348 ~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~--~~~~~--~~~~~~~---~------------~~v~-~~~ 404 (486)
.... ..+.......+++ ++++|+.+ +....|+.++. ..+.. ...+-+. . .... .+.
T Consensus 301 ~~l~-~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 301 KQLF-TIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEE-ECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred ceeE-ecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 1111 1122233445666 77754444 45678888654 33322 1222111 0 0112 222
Q ss_pred e---------CCCEEEEEeCCCcEEEEECCCCeeeEEecCc--------------c----------cCeEEEEecC--CE
Q psy9182 405 Y---------RDRLVVSGSSDNTIRLWDIECGACLRVLEGH--------------E----------ELVRCIRFDA--KR 449 (486)
Q Consensus 405 ~---------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h--------------~----------~~v~~~~~~~--~~ 449 (486)
. .+.++++-...+.|+.++ .+|. +.++.+. . .....|+++. ..
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 2 245666666778899998 4564 4444221 0 1356788843 44
Q ss_pred EEEEe-CCCcEEEEeCCCCC
Q psy9182 450 IVSGA-YDGKIKVWNLVAAL 468 (486)
Q Consensus 450 l~s~~-~dg~v~iwdl~~~~ 468 (486)
|+.+. ....|+.++++...
T Consensus 458 lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EEEEETTTTEEEEEEECCCC
T ss_pred EEEEeCCCCEEEEEECCCCc
Confidence 55544 56789999987644
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.18 E-value=3.6 Score=44.44 Aligned_cols=167 Identities=8% Similarity=0.166 Sum_probs=89.0
Q ss_pred cceEEEEe-CCCEEEEEecCCeEEEEECCC-ceeeEEEcCCc----ccEEEEEe--cCCEEEEEe-------CCCcEEEE
Q psy9182 235 KGVYCLQY-DDHKIVSGLRDNTIKVWDRVS-LQCIKVLTGHT----GSVLCLQY--DERVIISGS-------SDSTVRVW 299 (486)
Q Consensus 235 ~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~----~~v~~~~~--~~~~l~~~~-------~dg~i~vw 299 (486)
..|..|.| +.+.|+..+ +..|+.|++.. ..+.+.+..|. ..|..... +.++++..+ -.|.+.+|
T Consensus 106 e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy 184 (1630)
T 1xi4_A 106 DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (1630)
T ss_pred CCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence 34666666 445555444 45799999864 34555555442 33444333 455554332 34788899
Q ss_pred ECCCCcEEEEecccCccEEEEEEcC----CeEEE-Ee---CCCcEEEEECCCC---CceeeEE---e-eec--CcccEEE
Q psy9182 300 DVNTGEMVNTLIHHCEAVLHLRFSN----GMMVT-CS---KDRSIAVWDMVSP---NEITLRR---V-LVG--HRAAVNV 362 (486)
Q Consensus 300 d~~~~~~~~~~~~~~~~i~~~~~~~----~~l~~-~~---~dg~i~i~d~~~~---~~~~~~~---~-~~~--~~~~v~~ 362 (486)
..+.+ ..+.+.+|......+...+ ..+++ +. ..+.++|.++... ....... . +.. ...-..+
T Consensus 185 S~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~ 263 (1630)
T 1xi4_A 185 SVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 263 (1630)
T ss_pred ecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceE
Confidence 88644 3344555554444444432 12222 21 1378999998553 1110000 0 000 0111123
Q ss_pred EEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182 363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403 (486)
Q Consensus 363 ~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 403 (486)
+.. .-..++..+.-|.|.+||+.++.++..-+-....|...
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~ 306 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 306 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEe
Confidence 333 34567777888999999999999877655444444333
No 335
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=93.13 E-value=5.5 Score=37.01 Aligned_cols=232 Identities=10% Similarity=0.102 Sum_probs=139.5
Q ss_pred ceEEEEeCCCEEEEEecCC-eEEEEECCCc---------e--eeEEEcC-CcccEEEEEecCCEEEEEeCCCcEEEEECC
Q psy9182 236 GVYCLQYDDHKIVSGLRDN-TIKVWDRVSL---------Q--CIKVLTG-HTGSVLCLQYDERVIISGSSDSTVRVWDVN 302 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg-~i~i~d~~~~---------~--~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~ 302 (486)
.+..++....+.++-..++ .|+.|-.... . ....+.. ....|..++......++-..+|.|+.|-..
T Consensus 69 ~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n 148 (406)
T 4d9s_A 69 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 148 (406)
T ss_dssp CEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred CEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCC
Confidence 4666666666665555554 8999953221 0 0111111 223678888877777777899999999654
Q ss_pred CC-c---------E-EEEecc-cCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc---------eeeEEeeecCcccEE
Q psy9182 303 TG-E---------M-VNTLIH-HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE---------ITLRRVLVGHRAAVN 361 (486)
Q Consensus 303 ~~-~---------~-~~~~~~-~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~v~ 361 (486)
.. + . ...+.. ....|..++......++-..+|.|+.|-...... .............+.
T Consensus 149 ~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~ 228 (406)
T 4d9s_A 149 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS 228 (406)
T ss_dssp TTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEE
T ss_pred CCccCCCCCCCCcccceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEE
Confidence 21 1 1 111221 2336788888788888888999999996433211 111111112234577
Q ss_pred EEEeCCCEEEEEeCCCcEEEEECCCc-----------eEEEEEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCCC--
Q psy9182 362 VVDFDEKYIVSASGDRTIKVWNTSSC-----------EFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIECG-- 427 (486)
Q Consensus 362 ~~~~~~~~l~~~~~d~~i~iwd~~~~-----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~-- 427 (486)
.++....+.+.-..+|.|+.|-.... .....+.. ....|..++......++-..||.|+.|=....
T Consensus 229 ~va~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~Gq 308 (406)
T 4d9s_A 229 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQ 308 (406)
T ss_dssp EEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTST
T ss_pred EEEECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCC
Confidence 77777777777788999999974321 11112221 22357777777777777789999999965321
Q ss_pred ----------eeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182 428 ----------ACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAA 467 (486)
Q Consensus 428 ----------~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~ 467 (486)
.+..........|..|+.-....+.-..||.|..|=-...
T Consensus 309 LG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs~alt~~G~v~~wG~n~~ 358 (406)
T 4d9s_A 309 VGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 358 (406)
T ss_dssp TCSSSSSCEEEEEEECCGGGCCEEEEEECSSEEEEEETTSCEEEEECCTT
T ss_pred CCCCCCCCCccCEEEeccCCCcEEEEEeCCCeEEEEeCCCCEEEecCCCC
Confidence 1111111123468888885566666678999999986543
No 336
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=92.00 E-value=6.4 Score=35.11 Aligned_cols=189 Identities=13% Similarity=0.139 Sum_probs=104.9
Q ss_pred EEEeCCCEEEEEe-cCCeEEEEECCCceeeEE-EcC----Cc--ccEEEEEe---c--CCEEEEEe-------------C
Q psy9182 239 CLQYDDHKIVSGL-RDNTIKVWDRVSLQCIKV-LTG----HT--GSVLCLQY---D--ERVIISGS-------------S 292 (486)
Q Consensus 239 ~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~-~~~----~~--~~v~~~~~---~--~~~l~~~~-------------~ 292 (486)
.+......+..++ ..+.|..||...+..... +.+ .. ..+..+.+ | +.++++.. .
T Consensus 19 ~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 19 IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSS
T ss_pred cCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCC
Confidence 3444445666665 789999999876544333 222 11 13467777 3 33444333 2
Q ss_pred CCcEEEEECC---CCcEEEEecc-------------cCccEEEEEEcC--CeEEEEeCC-CcEEEEECCCCCceeeEEee
Q psy9182 293 DSTVRVWDVN---TGEMVNTLIH-------------HCEAVLHLRFSN--GMMVTCSKD-RSIAVWDMVSPNEITLRRVL 353 (486)
Q Consensus 293 dg~i~vwd~~---~~~~~~~~~~-------------~~~~i~~~~~~~--~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~ 353 (486)
+..|..+|+. +++.+..... .......++..+ +..++++.. +.|..++.............
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence 5779999999 7776654431 112366777764 466667777 77777776544221111111
Q ss_pred --ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE--EEEE-cCC------cccEEEEEeCCCE-EEEEeCCCcE
Q psy9182 354 --VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF--VRTL-NGH------KRGIACLQYRDRL-VVSGSSDNTI 419 (486)
Q Consensus 354 --~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~--~~~~-~~~------~~~v~~~~~~~~~-l~~~~~dg~v 419 (486)
.......+.+.+ +++.|++....+.|..+|+.+... +..- .+. ...+.....+|+. +++....+.+
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~ 258 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAI 258 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEE
T ss_pred CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEE
Confidence 111112334444 788888887799999999885332 2111 021 1122233346777 4555556666
Q ss_pred EEEECCCC
Q psy9182 420 RLWDIECG 427 (486)
Q Consensus 420 ~iwd~~~~ 427 (486)
.+.+....
T Consensus 259 ~l~S~DgW 266 (334)
T 2p9w_A 259 SFRSWDNW 266 (334)
T ss_dssp EEECSSTT
T ss_pred EEECCCCc
Confidence 66665543
No 337
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=90.86 E-value=10 Score=35.30 Aligned_cols=191 Identities=9% Similarity=0.035 Sum_probs=113.9
Q ss_pred ceEEEEeCCCEEEEEecCCeEEEEEC--C-Ccee---------eEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCC
Q psy9182 236 GVYCLQYDDHKIVSGLRDNTIKVWDR--V-SLQC---------IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNT 303 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg~i~i~d~--~-~~~~---------~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~ 303 (486)
.+..++......++-..||.|+.|-. . .++. ..........|..++......++-..+|.|+.|-...
T Consensus 128 ~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~ 207 (423)
T 3mvd_K 128 KALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAE 207 (423)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred CEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCc
Confidence 45566666677777788899999974 2 1221 1111123346788888777777778899999995432
Q ss_pred C-----------------------cEEEEecccCccEEEEEEcCCeEEEE-eCCCcEEEEECCCCCce--------eeEE
Q psy9182 304 G-----------------------EMVNTLIHHCEAVLHLRFSNGMMVTC-SKDRSIAVWDMVSPNEI--------TLRR 351 (486)
Q Consensus 304 ~-----------------------~~~~~~~~~~~~i~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~--------~~~~ 351 (486)
. .+..........|..++......++. ..+|.|+.|-......+ ....
T Consensus 208 ~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~ 287 (423)
T 3mvd_K 208 QGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALT 287 (423)
T ss_dssp TSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEE
T ss_pred CCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeee
Confidence 1 11111112234566666665544444 68999999965431110 0001
Q ss_pred eeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCc------------eEEEEEcCCcccEEEEEeCCCEEEEEeCCCcE
Q psy9182 352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC------------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 419 (486)
Q Consensus 352 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~------------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v 419 (486)
........|..++....+.+.-..+|.|+.|-.... .....+..-...|..++......++-..||.|
T Consensus 288 p~~~~~~~v~~ia~G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v 367 (423)
T 3mvd_K 288 PIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKL 367 (423)
T ss_dssp EEEECCCSEEEEEECSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCE
T ss_pred eEEcCCCCeEEEEcccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCE
Confidence 111113467777777777777788999999974321 11222333333678888877777777899999
Q ss_pred EEEECCC
Q psy9182 420 RLWDIEC 426 (486)
Q Consensus 420 ~iwd~~~ 426 (486)
+.|=...
T Consensus 368 ~~wG~n~ 374 (423)
T 3mvd_K 368 YSWGSGV 374 (423)
T ss_dssp EEEECCT
T ss_pred EEECCCC
Confidence 9997643
No 338
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=88.98 E-value=15 Score=34.38 Aligned_cols=145 Identities=10% Similarity=0.047 Sum_probs=77.4
Q ss_pred EEEEEecC----CEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC-eEEEEeCCC-----cEEEEECCCCCc
Q psy9182 277 VLCLQYDE----RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-MMVTCSKDR-----SIAVWDMVSPNE 346 (486)
Q Consensus 277 v~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~~~ 346 (486)
...++++. ..|+.+...+.|+.+|..+++..... ........++++++ .|+++...+ .+..++......
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 35666652 56666655588999999877665443 34556778888743 355554322 233333322211
Q ss_pred eeeEEeeecCcccEE--EEEe-CCCEEEEEeCCCcEEEEECCCceEEEEE-cC-CcccEEEEEe--CCCEE-EEEeCCCc
Q psy9182 347 ITLRRVLVGHRAAVN--VVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTL-NG-HKRGIACLQY--RDRLV-VSGSSDNT 418 (486)
Q Consensus 347 ~~~~~~~~~~~~~v~--~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~-~~~~v~~~~~--~~~~l-~~~~~dg~ 418 (486)
.. .... ...... ++.. ++.+.++-..++.|+.+|..++.....+ .. ....-..+++ +++.| ++-...+.
T Consensus 220 ~~--~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 220 ER--LSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp CE--EEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred cc--cccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 00 0111 111122 2333 4555555556788999999877653332 21 1122234555 47744 45556788
Q ss_pred EEEEECC
Q psy9182 419 IRLWDIE 425 (486)
Q Consensus 419 v~iwd~~ 425 (486)
|+.++..
T Consensus 297 I~~~~~d 303 (433)
T 4hw6_A 297 IYRVDYN 303 (433)
T ss_dssp EEEEEBC
T ss_pred EEEEeCC
Confidence 9998865
No 339
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=88.55 E-value=17 Score=34.47 Aligned_cols=188 Identities=11% Similarity=0.131 Sum_probs=114.5
Q ss_pred cceEEEEeCCCEEEEEecCCeEEEEECC---Ccee------------eEEEcC-CcccEEEEEecCCEEEEEeCCCcEEE
Q psy9182 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRV---SLQC------------IKVLTG-HTGSVLCLQYDERVIISGSSDSTVRV 298 (486)
Q Consensus 235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~------------~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~v 298 (486)
..+..++......++-..+|.|+.|-.. .++. ...+.. ....|..++......++-..+|.|+.
T Consensus 148 ~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~ 227 (473)
T 3of7_A 148 HKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFA 227 (473)
T ss_dssp CCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCEEE
T ss_pred CcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeEEE
Confidence 4566666677777777888999988641 1110 111111 12347888887777777889999999
Q ss_pred EECCCC-cE--------------EEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc------------e-eeE
Q psy9182 299 WDVNTG-EM--------------VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE------------I-TLR 350 (486)
Q Consensus 299 wd~~~~-~~--------------~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------------~-~~~ 350 (486)
|-.... ++ ...+ ....|..++......++-..+|.|+.|-...... . ...
T Consensus 228 wG~n~~GqLG~~~~~~~~~~~~~p~~~--~~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~ 305 (473)
T 3of7_A 228 WGNGQQNQLGRKVMERFRLKTLDPRPF--GLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPK 305 (473)
T ss_dssp EECCTTSTTSSCCCGGGTTTTCSCEEC--SCCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEE
T ss_pred EeCCCCCCCCCCccccccccccCceec--CCcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccc
Confidence 965321 11 0011 1246777877777888888999999996532110 1 111
Q ss_pred EeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCC-ce-------------------E-----EEEEcCCcccEEEEEe
Q psy9182 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS-CE-------------------F-----VRTLNGHKRGIACLQY 405 (486)
Q Consensus 351 ~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~-~~-------------------~-----~~~~~~~~~~v~~~~~ 405 (486)
.........|..++......++-..+|.|+.|-... ++ . ...+. ....|..++.
T Consensus 306 ~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~-~~~~v~~Ia~ 384 (473)
T 3of7_A 306 RLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLN-NVPKFKSVAA 384 (473)
T ss_dssp ECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECC-SSCCEEEEEE
T ss_pred cccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccC-CCCceEEEEe
Confidence 111112245777777666666677899999997432 11 0 01111 1126777887
Q ss_pred CCCEEEEEeCCCcEEEEECC
Q psy9182 406 RDRLVVSGSSDNTIRLWDIE 425 (486)
Q Consensus 406 ~~~~l~~~~~dg~v~iwd~~ 425 (486)
.....++-..||.|+.|=..
T Consensus 385 G~~hs~al~~~G~vy~wG~n 404 (473)
T 3of7_A 385 GSHHSVAVAQNGIAYSWGFG 404 (473)
T ss_dssp CSSEEEEEETTSCEEEEECC
T ss_pred CCCeEEEEeCCCcEEEeeCC
Confidence 77777777899999999654
No 340
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=86.40 E-value=11 Score=37.60 Aligned_cols=71 Identities=11% Similarity=0.270 Sum_probs=49.4
Q ss_pred ccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc-------------cCeEEEEecCCEEEEEe--CCCcEEEE
Q psy9182 398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-------------ELVRCIRFDAKRIVSGA--YDGKIKVW 462 (486)
Q Consensus 398 ~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~l~s~~--~dg~v~iw 462 (486)
..|.++.++..++++-+.|+++|+|++++++++....-.. .+-.-+..-+.++++=+ .+|..++|
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~ 301 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMG 301 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEE
Confidence 3577888889999999999999999999999887764311 11112333336666544 57899999
Q ss_pred eCCCCC
Q psy9182 463 NLVAAL 468 (486)
Q Consensus 463 dl~~~~ 468 (486)
++....
T Consensus 302 ~l~~~~ 307 (729)
T 3f7f_A 302 TLLVDS 307 (729)
T ss_dssp EEEC--
T ss_pred EEEEcC
Confidence 986543
No 341
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.57 E-value=23 Score=32.88 Aligned_cols=142 Identities=13% Similarity=0.145 Sum_probs=87.7
Q ss_pred EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC----cccEEEEE--ecCCEEEEEeCCCcEEEEECCCCc-------
Q psy9182 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH----TGSVLCLQ--YDERVIISGSSDSTVRVWDVNTGE------- 305 (486)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~--~~~~~l~~~~~dg~i~vwd~~~~~------- 305 (486)
....++..++.+- ++.||.-++......+.++.. -..|..+. .+|++|+..+. ..|.|..+..+.
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence 3445677766654 578888887755455555432 12354444 47888888765 478888876321
Q ss_pred -----EEEEecc------cCccEEEEEEcC-----CeEEEEeCCCcEEEEECCCCCceee-EE------eeecCcccEEE
Q psy9182 306 -----MVNTLIH------HCEAVLHLRFSN-----GMMVTCSKDRSIAVWDMVSPNEITL-RR------VLVGHRAAVNV 362 (486)
Q Consensus 306 -----~~~~~~~------~~~~i~~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~~~-~~------~~~~~~~~v~~ 362 (486)
..+.+.- ...+|..+.|+| ..|++-..|+.|++||+........ .. ........+.+
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEE
Confidence 1223322 246799999986 3899999999999999986332111 10 11122356778
Q ss_pred EEe--CCCEEEEEe--CCCcEEEE
Q psy9182 363 VDF--DEKYIVSAS--GDRTIKVW 382 (486)
Q Consensus 363 ~~~--~~~~l~~~~--~d~~i~iw 382 (486)
++| ++-.|...+ ..|.|+-.
T Consensus 185 ~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 185 LEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCEEEE
Confidence 888 444555544 77777654
No 342
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.19 E-value=24 Score=32.76 Aligned_cols=127 Identities=15% Similarity=0.103 Sum_probs=75.5
Q ss_pred CCcEEEEECCCCCceeeEEeee-cCcccE--EEEEeCCCEEEEEeCCCcEEEEECCCce------------EEEEEcC--
Q psy9182 333 DRSIAVWDMVSPNEITLRRVLV-GHRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCE------------FVRTLNG-- 395 (486)
Q Consensus 333 dg~i~i~d~~~~~~~~~~~~~~-~~~~~v--~~~~~~~~~l~~~~~d~~i~iwd~~~~~------------~~~~~~~-- 395 (486)
++.||.-++......+...... -.-..+ ..+..+|++|+..+. ..|.|-.+..+. ..+.+.-
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 4677777766433222222110 001123 334448889988865 578888876321 1223332
Q ss_pred ----CcccEEEEEeC-----CCEEEEEeCCCcEEEEECCCC--eeeEEec---------CcccCeEEEEe--cCCEEEEE
Q psy9182 396 ----HKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECG--ACLRVLE---------GHEELVRCIRF--DAKRIVSG 453 (486)
Q Consensus 396 ----~~~~v~~~~~~-----~~~l~~~~~dg~v~iwd~~~~--~~~~~~~---------~h~~~v~~~~~--~~~~l~s~ 453 (486)
...+|..+.|+ +..|++-..|+.|++||+... ++. .++ .....|.+++| ++-.|...
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl 197 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCL 197 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEE
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEE
Confidence 24678999995 678999999999999999752 222 332 22356889999 44445554
Q ss_pred e--CCCcEEE
Q psy9182 454 A--YDGKIKV 461 (486)
Q Consensus 454 ~--~dg~v~i 461 (486)
+ .+|.|+-
T Consensus 198 ~~t~~GDIYA 207 (452)
T 3pbp_A 198 NTTEGGDIFA 207 (452)
T ss_dssp ECTTSCEEEE
T ss_pred ecCCCCCEEE
Confidence 4 6676654
No 343
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=84.92 E-value=15 Score=36.51 Aligned_cols=69 Identities=12% Similarity=0.268 Sum_probs=48.0
Q ss_pred ccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-------------cEEEEEeCCCEEEEEe--CCCcEEEE
Q psy9182 358 AAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-------------GIACLQYRDRLVVSGS--SDNTIRLW 422 (486)
Q Consensus 358 ~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------------~v~~~~~~~~~l~~~~--~dg~v~iw 422 (486)
..|.++.++..++++-+.|.++|+||+++++++....-... .-.-+..-+.++++=. .+|..++|
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~ 301 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMG 301 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEE
Confidence 45777788899999999999999999999998887653111 1111222245555433 56889999
Q ss_pred ECCC
Q psy9182 423 DIEC 426 (486)
Q Consensus 423 d~~~ 426 (486)
.+..
T Consensus 302 ~l~~ 305 (729)
T 3f7f_A 302 TLLV 305 (729)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8853
No 344
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=81.38 E-value=38 Score=32.24 Aligned_cols=148 Identities=10% Similarity=0.130 Sum_probs=80.8
Q ss_pred EEEEEEcC---CeEEEEe-CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---------CCCEEEEEeCCC------
Q psy9182 317 VLHLRFSN---GMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---------DEKYIVSASGDR------ 377 (486)
Q Consensus 317 i~~~~~~~---~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---------~~~~l~~~~~d~------ 377 (486)
...|+++| +.|+++. ..+.|++.|+..+..................+++ ++++|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 45677775 3444444 3467888888776543322211111224566666 677677766554
Q ss_pred -cEEEEECCC-ce--------EEEEEcCCcccEEEEEe-CCCEEEEEeCCCcEEEEECC-------CCee----------
Q psy9182 378 -TIKVWNTSS-CE--------FVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIE-------CGAC---------- 429 (486)
Q Consensus 378 -~i~iwd~~~-~~--------~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~-------~~~~---------- 429 (486)
.|.+++... +. .+..+. |...+ ++.. ++.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~gi-avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGA-TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCE-EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred ceEEEEecCCCCceeecccceeeccCC-CceEE-EEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266666443 22 222222 22222 2333 35566666678889999987 5543
Q ss_pred -eEE-ec-CcccCeEEEEe--cCCEEEEE-eCCCcEEEEeCCC
Q psy9182 430 -LRV-LE-GHEELVRCIRF--DAKRIVSG-AYDGKIKVWNLVA 466 (486)
Q Consensus 430 -~~~-~~-~h~~~v~~~~~--~~~~l~s~-~~dg~v~iwdl~~ 466 (486)
... +. +.......|+| ++++|..+ .....|+.++.+.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 112 11 22344678888 77755444 4567788866543
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=80.37 E-value=30 Score=30.42 Aligned_cols=210 Identities=9% Similarity=-0.013 Sum_probs=114.8
Q ss_pred EeCCCEEEEEe--cCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCC--------------CcEEEEECCCC
Q psy9182 241 QYDDHKIVSGL--RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD--------------STVRVWDVNTG 304 (486)
Q Consensus 241 ~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--------------g~i~vwd~~~~ 304 (486)
+.++..++... .++.|...+....... .+.. ..+..+..++++|+-+... ..|+..++..+
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~-~l~~--~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIH-KLSN--DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCE-EEEE--EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCE-EccC--CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 45677766654 2566777776544433 3321 2345566678777766543 36777787766
Q ss_pred cEEEEecccCccEEEEEEcCCeEEEEe----CCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC-CCcE
Q psy9182 305 EMVNTLIHHCEAVLHLRFSNGMMVTCS----KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG-DRTI 379 (486)
Q Consensus 305 ~~~~~~~~~~~~i~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-d~~i 379 (486)
+...... .....++..++.++-.. .+..|+..++...... .+..+.. ..+.++++.|+-.+. ...|
T Consensus 99 ~~~~l~~---~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~----~lt~~~~--~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 99 GSTVLDP---DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK----KIKNHYL--FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp CCEEEEC---SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE----EEESSCC--CCSEEETTEEEEECTTTCCE
T ss_pred cceEeec---CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE----EEeCCCc--eEeeEECCEEEEEeCCCceE
Confidence 5332222 23335666777776655 3445666666543322 1222222 345677777776554 6788
Q ss_pred EEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCC--CcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEeC--
Q psy9182 380 KVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD--NTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAY-- 455 (486)
Q Consensus 380 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~-- 455 (486)
...++..+.....+.+.. . ..+.+++.+|+-...+ ..|..-++..+. ...+.. ..+..+++++++|.-++.
T Consensus 170 y~~~l~g~~~~~l~~~~~-~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~~~~~~~g~~Iy~~~~~~ 244 (302)
T 3s25_A 170 YRYDTASQSEALFYDCNC-Y-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANIEHYNVYGSLIFYQRGGD 244 (302)
T ss_dssp EEEETTTTEEEEEECSCE-E-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCEEEEEEETTEEEEEECSS
T ss_pred EEEECCCCCEEEEeCCCc-c-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCcceEEECCCEEEEEECCC
Confidence 888987766544444322 1 2244567776655543 356666666433 344432 334567777777765432
Q ss_pred CCcEEEEeCCCC
Q psy9182 456 DGKIKVWNLVAA 467 (486)
Q Consensus 456 dg~v~iwdl~~~ 467 (486)
.+.|..-+++..
T Consensus 245 ~~~i~~~~~DG~ 256 (302)
T 3s25_A 245 NPALCVVKNDGT 256 (302)
T ss_dssp SCEEEEEETTSC
T ss_pred CcEEEEEECCCC
Confidence 345555555543
No 346
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=80.10 E-value=37 Score=31.34 Aligned_cols=188 Identities=6% Similarity=0.028 Sum_probs=115.4
Q ss_pred ceEEEEeCCCEEEEEecCCeEEEEEC--C-Ccee-----------eEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEEC
Q psy9182 236 GVYCLQYDDHKIVSGLRDNTIKVWDR--V-SLQC-----------IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301 (486)
Q Consensus 236 ~v~~~~~~~~~l~~~~~dg~i~i~d~--~-~~~~-----------~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~ 301 (486)
.+..++......++-..||.|+.|-. . .+++ ...+ .....|..++......++-..||.|+.|=.
T Consensus 112 ~i~~va~G~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v-~~~~~i~~ia~G~~hs~alt~~G~v~~wG~ 190 (413)
T 1a12_A 112 KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV-QLDVPVVKVASGNDHLVMLTADGDLYTLGC 190 (413)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE-CCSSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred cEEEEecCCCeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEe-cCCCCEEEEEecCceEEEEcCCCCEEEeeC
Confidence 45666666677777788888888864 1 1110 1111 233467788887777777788999999965
Q ss_pred CCC-cE---------------------EEEecc------cCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc-------
Q psy9182 302 NTG-EM---------------------VNTLIH------HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE------- 346 (486)
Q Consensus 302 ~~~-~~---------------------~~~~~~------~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------- 346 (486)
... ++ ...+.. ....|..++......++-..+|.|+.|-......
T Consensus 191 n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~ 270 (413)
T 1a12_A 191 GEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTE 270 (413)
T ss_dssp CTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCS
T ss_pred CCCCccCCCccccccccccccccccccCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCC
Confidence 421 10 001111 2346778887777777778999999997643211
Q ss_pred -eeeEEeeec---CcccEEEEEeCCCEEEEEeCCCcEEEEECCC------c------eEEEEEcCCcccEEEEEeCCCEE
Q psy9182 347 -ITLRRVLVG---HRAAVNVVDFDEKYIVSASGDRTIKVWNTSS------C------EFVRTLNGHKRGIACLQYRDRLV 410 (486)
Q Consensus 347 -~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~------~------~~~~~~~~~~~~v~~~~~~~~~l 410 (486)
......... ....|..++....+.+.-..+|.|+.|-... + .....+.. ...|..++......
T Consensus 271 ~~~~P~~v~~l~~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~-l~~v~~v~~G~~hs 349 (413)
T 1a12_A 271 SCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR-LPAVSSVACGASVG 349 (413)
T ss_dssp CEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCS-SSSEEEEEECSSEE
T ss_pred cccccEEchhccCCCceEEEEecccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecc-cCceeEEEECcceE
Confidence 011111111 1134777777667777777899999996432 1 11112222 23678888877777
Q ss_pred EEEeCCCcEEEEECC
Q psy9182 411 VSGSSDNTIRLWDIE 425 (486)
Q Consensus 411 ~~~~~dg~v~iwd~~ 425 (486)
++-..||.|+.|=..
T Consensus 350 ~alt~~G~v~~wG~n 364 (413)
T 1a12_A 350 YAVTKDGRVFAWGMG 364 (413)
T ss_dssp EEEETTSCEEEEECC
T ss_pred EEEeCCCCEEEecCC
Confidence 778899999999654
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=70.10 E-value=45 Score=34.93 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=28.9
Q ss_pred cEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN 394 (486)
Q Consensus 359 ~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 394 (486)
.+.++.. +..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3444444 66799999999999999999999988764
No 348
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=67.73 E-value=69 Score=28.72 Aligned_cols=65 Identities=11% Similarity=0.053 Sum_probs=38.6
Q ss_pred eEEEEeCCCEEEEEecCCeEEEEECCCcee--eEEEc---CCcccEEEEEecC-----CEEEEEeCC------CcEEEEE
Q psy9182 237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQC--IKVLT---GHTGSVLCLQYDE-----RVIISGSSD------STVRVWD 300 (486)
Q Consensus 237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~---~~~~~v~~~~~~~-----~~l~~~~~d------g~i~vwd 300 (486)
-+++.++++ ++++..+|.|.+++ +++. +..+. ........++++. ..|+++... +.|..++
T Consensus 35 ~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~ 111 (352)
T 2ism_A 35 ALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLR 111 (352)
T ss_dssp EEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEE
T ss_pred EEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEE
Confidence 455677887 44556679999998 3432 22221 1234567788843 466655442 5688888
Q ss_pred CCCC
Q psy9182 301 VNTG 304 (486)
Q Consensus 301 ~~~~ 304 (486)
...+
T Consensus 112 ~~~~ 115 (352)
T 2ism_A 112 HLGE 115 (352)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 7644
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.24 E-value=2.1e+02 Score=30.57 Aligned_cols=29 Identities=28% Similarity=0.275 Sum_probs=26.1
Q ss_pred CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182 366 DEKYIVSASGDRTIKVWNTSSCEFVRTLN 394 (486)
Q Consensus 366 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 394 (486)
+..++++-+.|+++|+||+.+++++.+..
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 66899999999999999999999988764
No 350
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=52.39 E-value=1.3e+02 Score=26.92 Aligned_cols=48 Identities=17% Similarity=0.227 Sum_probs=28.8
Q ss_pred ccccCCccCcceEEEeecCceeeeccccccc-ceeeec---CcccceeEEEeec
Q psy9182 107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCE-FVRTLN---GHKRGIACLQYRD 156 (486)
Q Consensus 107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~-~~~~l~---~h~~~V~~~~~~~ 156 (486)
...+++.|+|+++++ ..+|.|+++| .+++ .+..+. ........+++++
T Consensus 31 P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~p 82 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHP 82 (354)
T ss_dssp EEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECT
T ss_pred CeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCC
Confidence 456778889975555 5558999887 3454 222221 1223567777764
No 351
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=51.82 E-value=1.5e+02 Score=27.62 Aligned_cols=50 Identities=16% Similarity=0.120 Sum_probs=31.8
Q ss_pred ccccCCccCcceEEEeecCceeeecccccccc--eeeecC------cccceeEEEeec
Q psy9182 107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEF--VRTLNG------HKRGIACLQYRD 156 (486)
Q Consensus 107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~--~~~l~~------h~~~V~~~~~~~ 156 (486)
...+++.|+|+++++-...+.|++++..+++. +..+.. .......|+|++
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC
Confidence 45778889998777765555788887655543 222221 234566788874
No 352
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=49.90 E-value=1.4e+02 Score=26.74 Aligned_cols=131 Identities=14% Similarity=0.221 Sum_probs=68.9
Q ss_pred CCCcEEEEECCCCCc-eeeEEeeec-----CcccEEEEEe----CCC-EEEEEeC---CCcEEEEECCCc----eEEEEE
Q psy9182 332 KDRSIAVWDMVSPNE-ITLRRVLVG-----HRAAVNVVDF----DEK-YIVSASG---DRTIKVWNTSSC----EFVRTL 393 (486)
Q Consensus 332 ~dg~i~i~d~~~~~~-~~~~~~~~~-----~~~~v~~~~~----~~~-~l~~~~~---d~~i~iwd~~~~----~~~~~~ 393 (486)
.+|.|.++|+.+... ..... ..+ .......+.+ ++. +|+++.. +..|.+|++... ..+..+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 688999999874321 11111 211 1234445554 343 4555432 456777766542 223344
Q ss_pred cCCc-ccEEEEEe--CCCEEEEEeC-----------------CCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEE
Q psy9182 394 NGHK-RGIACLQY--RDRLVVSGSS-----------------DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV 451 (486)
Q Consensus 394 ~~~~-~~v~~~~~--~~~~l~~~~~-----------------dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~ 451 (486)
.+.. ...+.+.. +|.+.++... .|.|.-+|. ++ +..+...-...+.++| |++.|+
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lY 236 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVY 236 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEE
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEE
Confidence 4322 23455555 4665555431 244555554 33 2233223345678899 777766
Q ss_pred EEe-CCCcEEEEeCCC
Q psy9182 452 SGA-YDGKIKVWNLVA 466 (486)
Q Consensus 452 s~~-~dg~v~iwdl~~ 466 (486)
.+. ..+.|..|+++.
T Consensus 237 vadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 237 IAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEGGGTEEEEEEECT
T ss_pred EEeCCCCeEEEEEECC
Confidence 654 578899999874
No 353
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=49.76 E-value=1.4e+02 Score=26.61 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=20.2
Q ss_pred ccccCCccCcceEEEeecCceeeecccc
Q psy9182 107 FISLLPNFDEKYIVSASGDRTIKVWNTS 134 (486)
Q Consensus 107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~ 134 (486)
...+++.|+|++|+.+...|.|++++..
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence 4577888999834445567899998753
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=49.64 E-value=91 Score=30.19 Aligned_cols=92 Identities=16% Similarity=0.115 Sum_probs=56.3
Q ss_pred EEEeCCCEEEEEe-CCCcEEEEECCCc------eE-------EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182 362 VVDFDEKYIVSAS-GDRTIKVWNTSSC------EF-------VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425 (486)
Q Consensus 362 ~~~~~~~~l~~~~-~d~~i~iwd~~~~------~~-------~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~ 425 (486)
.+++||+++++++ .+.++.++|++.. +. +...+. .....-..|+ |+...+-..|..|.-|++.
T Consensus 329 ~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 329 NTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred eeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEEEEecc
Confidence 4556899888776 5788999998742 11 222221 2233455564 5455566689999999996
Q ss_pred CC----------eeeEEecCcccCeEEEEe-------cCCEEEEEe
Q psy9182 426 CG----------ACLRVLEGHEELVRCIRF-------DAKRIVSGA 454 (486)
Q Consensus 426 ~~----------~~~~~~~~h~~~v~~~~~-------~~~~l~s~~ 454 (486)
.. ..+..+.-|-.+-.-.+- ||++|++..
T Consensus 408 ~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 408 EAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp HHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred HHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 43 455566655443333321 777877774
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=49.45 E-value=9.2 Score=41.05 Aligned_cols=38 Identities=26% Similarity=0.239 Sum_probs=31.4
Q ss_pred cccccCCccCcceEEEeecCceeeecccccccceeeec
Q psy9182 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~ 143 (486)
.+.+++..++..++++-+.|+++||||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556666788899999999999999999999887753
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=47.06 E-value=10 Score=39.78 Aligned_cols=38 Identities=26% Similarity=0.239 Sum_probs=31.4
Q ss_pred cccccCCccCcceEEEeecCceeeecccccccceeeec
Q psy9182 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 143 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~ 143 (486)
.+.+++..++..+++|-+.|+++|||++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 34566667788899999999999999999999887653
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=46.83 E-value=1.5e+02 Score=26.17 Aligned_cols=180 Identities=9% Similarity=0.080 Sum_probs=95.5
Q ss_pred CEEEEEeCCCcEEEEECCC-------CcEEEEec-ccCccEEEEEE--cCCeEEEEeCCCcEEEEECCCCCce------e
Q psy9182 285 RVIISGSSDSTVRVWDVNT-------GEMVNTLI-HHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEI------T 348 (486)
Q Consensus 285 ~~l~~~~~dg~i~vwd~~~-------~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~------~ 348 (486)
..+++.+.+|.|+--.+.+ +.-+..+. ...+.+..+.. ..+.++.-+..|.++-.....-... .
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 3566667777777554321 11111111 11223333322 2456777777787765543211100 0
Q ss_pred e---EEeeecCcccEEEEEe-----CCCEEEEEeCCCcEEEEECCCce-------EEEEEcCCcccEEEEEe-CCCEEEE
Q psy9182 349 L---RRVLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSSCE-------FVRTLNGHKRGIACLQY-RDRLVVS 412 (486)
Q Consensus 349 ~---~~~~~~~~~~v~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~-~~~~l~~ 412 (486)
. .-.+. ....|.++.. ++.+++..+.+|.++--.+.... ....++....-+..+.. ....|+.
T Consensus 84 ~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 84 HVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLL 162 (327)
T ss_dssp EHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEE
T ss_pred EHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEE
Confidence 0 00011 2334444433 36799999999999988765422 22223333333333333 3567888
Q ss_pred EeCCCcEEEEECC--C---------CeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 413 GSSDNTIRLWDIE--C---------GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 413 ~~~dg~v~iwd~~--~---------~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
.+..|.+..+... . |.....+. ....|.++.. ++..|+.++..|.++.-.+..
T Consensus 163 ~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 163 VSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp EETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 8899998888776 2 11111222 2345666655 566899999999999887654
No 358
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=45.01 E-value=1.7e+02 Score=26.09 Aligned_cols=66 Identities=11% Similarity=0.197 Sum_probs=40.7
Q ss_pred cEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE--EEEec---ccCccEEEEEEcCC-----eEEEEeCC------CcEE
Q psy9182 276 SVLCLQY--DERVIISGSSDSTVRVWDVNTGEM--VNTLI---HHCEAVLHLRFSNG-----MMVTCSKD------RSIA 337 (486)
Q Consensus 276 ~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~---~~~~~i~~~~~~~~-----~l~~~~~d------g~i~ 337 (486)
....+++ +++ ++++..+|.|.+++ +++. +..+. ........++++++ .++++... +.|.
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 3467777 666 45556679999998 4442 22221 12346788999875 66665542 5788
Q ss_pred EEECCCC
Q psy9182 338 VWDMVSP 344 (486)
Q Consensus 338 i~d~~~~ 344 (486)
.|+....
T Consensus 109 r~~~~~~ 115 (352)
T 2ism_A 109 RLRHLGE 115 (352)
T ss_dssp EEEECSS
T ss_pred EEEeCCC
Confidence 8887643
No 359
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=40.60 E-value=67 Score=26.78 Aligned_cols=28 Identities=11% Similarity=-0.034 Sum_probs=19.5
Q ss_pred cccccCCccCcceEEEeecCceeeeccccc
Q psy9182 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSS 135 (486)
Q Consensus 106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~ 135 (486)
.+..++++|+|.+.+. .+|.+.--+..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t 69 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPT 69 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCC
Confidence 4557889998886666 677766666544
No 360
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=33.50 E-value=1.6e+02 Score=28.52 Aligned_cols=119 Identities=9% Similarity=-0.012 Sum_probs=61.2
Q ss_pred cEEEEECCC----Cc-EEEEecccCccEEEEEEcCC--e-EEEEeCCCcEEEEECCCCCc-----e----eeEEeeecCc
Q psy9182 295 TVRVWDVNT----GE-MVNTLIHHCEAVLHLRFSNG--M-MVTCSKDRSIAVWDMVSPNE-----I----TLRRVLVGHR 357 (486)
Q Consensus 295 ~i~vwd~~~----~~-~~~~~~~~~~~i~~~~~~~~--~-l~~~~~dg~i~i~d~~~~~~-----~----~~~~~~~~~~ 357 (486)
.|.+.|.+. +. ....+... .....+..+|+ + ++.|-.+.++.++|++.... + ........-.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~p-ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVP-KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEES-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred CeeEEccccccccCCceEEEEeCC-CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence 366777665 22 22222221 22223444443 4 44455688999999874211 0 0001111122
Q ss_pred ccEEEEEe--CCCEEEEEeCCCcEEEEECCCc----------eEEEEEcCCcccEEEEE-------eCCCEEEEEe
Q psy9182 358 AAVNVVDF--DEKYIVSASGDRTIKVWNTSSC----------EFVRTLNGHKRGIACLQ-------YRDRLVVSGS 414 (486)
Q Consensus 358 ~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~----------~~~~~~~~~~~~v~~~~-------~~~~~l~~~~ 414 (486)
....-..| +|+-..+-.-|..|..|++... ..+..+.-|-.+--... .+|++|++..
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 33445566 4544444557999999998653 45666666654432222 2467777664
No 361
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=31.42 E-value=2.6e+02 Score=24.27 Aligned_cols=211 Identities=9% Similarity=0.032 Sum_probs=115.9
Q ss_pred EEEEeCCCEEEEEecC--------------CeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEe----CCCcEEEE
Q psy9182 238 YCLQYDDHKIVSGLRD--------------NTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGS----SDSTVRVW 299 (486)
Q Consensus 238 ~~~~~~~~~l~~~~~d--------------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~----~dg~i~vw 299 (486)
..+.+++++|+-.... ..|+..++...+...... .....++.+++.|+-.. .+..|...
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---DPCIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---SCEEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---CCccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 4567788887766543 367777877765433332 22346677888887765 34456666
Q ss_pred ECCCCcEEEEecccCccEEEEEEcCCeEEEEeC-CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC--
Q psy9182 300 DVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-- 376 (486)
Q Consensus 300 d~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-- 376 (486)
++.... ...+..+.. ..+.+.++.|+-.+. ...|...++....... ...+. .. ..+.+++.+|+-....
T Consensus 135 ~~dGs~-~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~---l~~~~-~~-~~~~P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 135 RIDGEE-KKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL---FYDCN-CY-KPVVLDDTNVYYMDVNRD 206 (302)
T ss_dssp ETTSCC-CEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEE---EECSC-EE-EEEEEETTEEEEEEGGGT
T ss_pred ECCCCC-eEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEE---EeCCC-cc-ceeeecCCEEEEEEcCCC
Confidence 665433 333333222 334566666665544 6778888876654321 12221 11 2244577777765543
Q ss_pred CcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeC--CCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEe
Q psy9182 377 RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS--DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGA 454 (486)
Q Consensus 377 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~ 454 (486)
..|..-++.... ...+. ...+..+.+.+.+|.-+.. .+.|..-++..........+ .+..+...+.+|+-..
T Consensus 207 ~~I~~~~ldG~~-~~~Lt--~~~~~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~~i~i~~d~Iy~td 280 (302)
T 3s25_A 207 NAIVHVNINNPN-PVVLT--EANIEHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG---EFCNINVTSQYVYFTD 280 (302)
T ss_dssp TEEEEECSSSCC-CEECS--CSCEEEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES---CEEEEEECSSEEEEEE
T ss_pred cEEEEEECCCCC-eEEEe--CCCcceEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC---ccceEEEeCCEEEEEE
Confidence 356666766544 33333 2334568888888776533 45677777763332222222 3557777666665544
Q ss_pred -CCCcEEEEeCC
Q psy9182 455 -YDGKIKVWNLV 465 (486)
Q Consensus 455 -~dg~v~iwdl~ 465 (486)
..+.|..-+++
T Consensus 281 ~~~~~i~~~~~d 292 (302)
T 3s25_A 281 FVSNKEYCTSTQ 292 (302)
T ss_dssp TTTCCEEEEESS
T ss_pred CCCCeEEEEECC
Confidence 44555544443
No 362
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=30.47 E-value=2.4e+02 Score=23.53 Aligned_cols=100 Identities=7% Similarity=-0.066 Sum_probs=54.4
Q ss_pred ccceEEEEeCCCEEEEEecCCeEEEEECCCcee------eEEEcC-CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC
Q psy9182 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC------IKVLTG-HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG 304 (486)
Q Consensus 234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~ 304 (486)
....++++|++.+.++ .+|.+.-.+..+... -..+-. --..-.++.+ ++.+.++ .||.|+-++..+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 3346788888887666 788877776544111 111110 0011245666 4444444 6799988876432
Q ss_pred cEE-------EEecccCccEEEEEEcCC-eEEEEeCCCcEEE
Q psy9182 305 EMV-------NTLIHHCEAVLHLRFSNG-MMVTCSKDRSIAV 338 (486)
Q Consensus 305 ~~~-------~~~~~~~~~i~~~~~~~~-~l~~~~~dg~i~i 338 (486)
... ..-...-..+..+.+.++ .|.+.. |+.++-
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr 158 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK 158 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence 111 111112245788888765 666666 887543
No 363
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=25.87 E-value=3.3e+02 Score=23.73 Aligned_cols=180 Identities=12% Similarity=0.152 Sum_probs=97.1
Q ss_pred cCCEEEEEeCCCcEEEEECCCCcE-------EE--EecccCccEEEEEE--cCCeEEEEeCCCcEEEEECCCCCcee---
Q psy9182 283 DERVIISGSSDSTVRVWDVNTGEM-------VN--TLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEIT--- 348 (486)
Q Consensus 283 ~~~~l~~~~~dg~i~vwd~~~~~~-------~~--~~~~~~~~i~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~--- 348 (486)
+..++++.+.+|.|+--.+..-+. +. .+.. .+.+..+.. ..+.++..+..|.++-+....-....
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 345566677777777665432211 11 1111 222333222 24577777788887766553211100
Q ss_pred ------eEEeeecCcccEEEE-Ee----CCCEEEEEeCCCcEEEEECCC-------ceEEEEEcCCcccEEEE-EeC-CC
Q psy9182 349 ------LRRVLVGHRAAVNVV-DF----DEKYIVSASGDRTIKVWNTSS-------CEFVRTLNGHKRGIACL-QYR-DR 408 (486)
Q Consensus 349 ------~~~~~~~~~~~v~~~-~~----~~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~~-~~~-~~ 408 (486)
..-.+.. ...+.++ .. ++.+++..+..|.++...+.. |.....+.. ...+..+ ..+ +.
T Consensus 86 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 0000111 2233333 22 356788889999999887643 222223333 2334333 333 56
Q ss_pred EEEEEeCCCcEEEEECCC---------CeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182 409 LVVSGSSDNTIRLWDIEC---------GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466 (486)
Q Consensus 409 ~l~~~~~dg~v~iwd~~~---------~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~ 466 (486)
.++..+.+|.+..+.... |.....+.. .+.|.++.. ++..|++.+..|..+..++..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 788899999999988743 222223332 345556555 566788999999999998854
No 364
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=22.14 E-value=6e+02 Score=25.37 Aligned_cols=96 Identities=10% Similarity=0.142 Sum_probs=52.1
Q ss_pred CCCcEEEEECCCCCc-----eeeEE-eeecCcccEEEEEe-CCCEEEEEeCCCc--EEEEECCCce-EEEE-EcCC-ccc
Q psy9182 332 KDRSIAVWDMVSPNE-----ITLRR-VLVGHRAAVNVVDF-DEKYIVSASGDRT--IKVWNTSSCE-FVRT-LNGH-KRG 399 (486)
Q Consensus 332 ~dg~i~i~d~~~~~~-----~~~~~-~~~~~~~~v~~~~~-~~~~l~~~~~d~~--i~iwd~~~~~-~~~~-~~~~-~~~ 399 (486)
..+.|...|+.++.. ..... ........+..+.+ .+.++++...++. |.++|+.+++ .... +... .+.
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~ 397 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNA 397 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTC
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeE
Confidence 467788888876321 11111 22334456667777 4556666666664 6777776664 2333 3222 234
Q ss_pred EEEEEe--C-CCEEEEEeC---CCcEEEEECCCCe
Q psy9182 400 IACLQY--R-DRLVVSGSS---DNTIRLWDIECGA 428 (486)
Q Consensus 400 v~~~~~--~-~~~l~~~~~---dg~v~iwd~~~~~ 428 (486)
+..+.. + +.++++.+. -+.+..+|+. ++
T Consensus 398 ~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~ 431 (711)
T 4hvt_A 398 IFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE 431 (711)
T ss_dssp EEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC
T ss_pred EEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc
Confidence 544443 3 345555543 3678888876 44
No 365
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=21.59 E-value=4.4e+02 Score=23.57 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=65.4
Q ss_pred CCeEEEEECCCc----eeeEEEcCCc-ccEEEEEe--cCCEEEEEe-----------------CCCcEEEEECCCCcEEE
Q psy9182 253 DNTIKVWDRVSL----QCIKVLTGHT-GSVLCLQY--DERVIISGS-----------------SDSTVRVWDVNTGEMVN 308 (486)
Q Consensus 253 dg~i~i~d~~~~----~~~~~~~~~~-~~v~~~~~--~~~~l~~~~-----------------~dg~i~vwd~~~~~~~~ 308 (486)
+..|.+|++... ..+..+.+.. ...+.+.. +|.+.++.. ..|.|.-+|. ++. .
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-R 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-E
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-E
Confidence 457777765442 2233444321 23466665 566555543 1245555554 322 2
Q ss_pred EecccCccEEEEEEcCC--eEEE-EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC---CCEEEEEeCC-CcEEE
Q psy9182 309 TLIHHCEAVLHLRFSNG--MMVT-CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---EKYIVSASGD-RTIKV 381 (486)
Q Consensus 309 ~~~~~~~~i~~~~~~~~--~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d-~~i~i 381 (486)
.+...-.....++++++ .+++ -+..+.|..|++.........+.+ ......-.+..| |++.+++..+ +.|..
T Consensus 215 ~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~ 293 (355)
T 3sre_A 215 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFF 293 (355)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHS
T ss_pred EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEE
Confidence 22223345678889865 4544 456789999998753333322333 223444455552 5665555433 34444
Q ss_pred EECC
Q psy9182 382 WNTS 385 (486)
Q Consensus 382 wd~~ 385 (486)
||..
T Consensus 294 ~~P~ 297 (355)
T 3sre_A 294 YDAE 297 (355)
T ss_dssp CCTT
T ss_pred ECCC
Confidence 5543
No 366
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=21.35 E-value=4.4e+02 Score=23.48 Aligned_cols=50 Identities=14% Similarity=0.135 Sum_probs=33.5
Q ss_pred ccccCCccCcceEEEeecCceeeecccccccc--eeee----cCcccceeEEEeec
Q psy9182 107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEF--VRTL----NGHKRGIACLQYRD 156 (486)
Q Consensus 107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~--~~~l----~~h~~~V~~~~~~~ 156 (486)
...+++.|||.++++-...|.|++++..+++. +..+ .........|++++
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~P 89 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSP 89 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECT
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEecc
Confidence 35678889998888776689999998765543 2222 12345667888864
Done!